BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015149
(412 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444661|ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
Length = 429
Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/404 (83%), Positives = 365/404 (90%), Gaps = 12/404 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
+HP LLA PQIEPILSGNLPP FD+STCRSVYVGNIHPQVT LLQEVFSSTGPLEGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFVDYFDRRSAAL+IVTLNGRH+FGQPIKVNWAYASSQREDTSGH+N+FVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ++AQSAINDLNG+WL
Sbjct: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN--------GISDGQEKSNEDAPENNPQ 251
G+RQIRCNWA KGA ++K +SD+KSVVELTN GI +G++KSN++APENN Q
Sbjct: 206 GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSGEVIYGIQNGKDKSNDEAPENNLQ 265
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
YTTVYVGNL+ EVTSVDLHRHFHAL G IEDVRVQRDKGFGFVRYSTH EAALAIQMGN
Sbjct: 266 YTTVYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGN 325
Query: 312 ARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQA 371
ARILCGKPIKCSWGSKPTP GTSSTPLPPP APH+PG SA D AAYERQ+ALSK+ GAQ
Sbjct: 326 ARILCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPGISAADFAAYERQMALSKMGGAQG 385
Query: 372 LMHPQAQHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
LMHPQAQHALK +GMGA G+SQAIYD GFQN ATTQQLMYY
Sbjct: 386 LMHPQAQHALKQTAMGMGAGGSSQAIYD-GGFQNAATTQQLMYY 428
>gi|225444659|ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
Length = 426
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/401 (84%), Positives = 365/401 (91%), Gaps = 9/401 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
+HP LLA PQIEPILSGNLPP FD+STCRSVYVGNIHPQVT LLQEVFSSTGPLEGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFVDYFDRRSAAL+IVTLNGRH+FGQPIKVNWAYASSQREDTSGH+N+FVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCS----DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
LSPEVTDATLFACFSV+P+CS DARVMWDQKTGRSRGFGFVSFRNQ++AQSAINDLN
Sbjct: 146 LSPEVTDATLFACFSVYPSCSSGIRDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLN 205
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTT 254
G+WLG+RQIRCNWA KGA ++K +SD+KSVVELTNG S DG++KSN++APENN QYTT
Sbjct: 206 GRWLGSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTT 265
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
VYVGNL+ EVTSVDLHRHFHAL G IEDVRVQRDKGFGFVRYSTH EAALAIQMGNARI
Sbjct: 266 VYVGNLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARI 325
Query: 315 LCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMH 374
LCGKPIKCSWGSKPTP GTSSTPLPPP APH+PG SA D AAYERQ+ALSK+ GAQ LMH
Sbjct: 326 LCGKPIKCSWGSKPTPAGTSSTPLPPPAAPHMPGISAADFAAYERQMALSKMGGAQGLMH 385
Query: 375 PQAQHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
PQAQHALK +GMGA G+SQAIYD GFQN ATTQQLMYY
Sbjct: 386 PQAQHALKQTAMGMGAGGSSQAIYD-GGFQNAATTQQLMYY 425
>gi|449446638|ref|XP_004141078.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 420
Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/423 (81%), Positives = 380/423 (89%), Gaps = 14/423 (3%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ RL+QQ MMQQ SLY HP LLAAPQIEPILSGNLPP FD+STCRSVYVGNIHPQVT
Sbjct: 1 MQYQRLRQQAMMQQ-SLYP-HPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVT 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQEVFSS GP+EGCKLI+K+KSSYGFVDYFDRRSAA++I++LNGR++FGQPIKVNWA
Sbjct: 59 EPLLQEVFSSIGPIEGCKLIRKEKSSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YASSQREDTSGHFN+FVGDLSPEVTDATLFACFSV+P+CSDARVMWDQKTGRSRG+GFV+
Sbjct: 119 YASSQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVA 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQE 239
FRN++DAQSAIND+NGKWLG+RQIRCNWA KGA SGD+KQSSDS+SVVELT+G SD GQE
Sbjct: 179 FRNEQDAQSAINDINGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
KSNEDAPENNPQYTTVYVGNL+ EVTSVDLHR+FHAL GTIEDVRVQRDKGFGFVRYST
Sbjct: 239 KSNEDAPENNPQYTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYER 359
+ EAALAIQ GNAR++CGKPIKCSWGSKPTPPGT+STPLPPP H+ G SA DLA+YER
Sbjct: 299 NAEAALAIQTGNARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYER 358
Query: 360 QIALSKIAGAQALMHPQ-AQHALK---------LGMGAAGASQAIYDSSGFQNVATTQQL 409
Q+ALSK+ AQALMHPQ AQHALK +GMG AG SQ IYD GFQN+ATTQQL
Sbjct: 359 QMALSKMGAAQALMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYD-GGFQNIATTQQL 417
Query: 410 MYY 412
MYY
Sbjct: 418 MYY 420
>gi|356565743|ref|XP_003551097.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 411
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/416 (80%), Positives = 369/416 (88%), Gaps = 10/416 (2%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ RL+QQ MMQ SLY +HP+LL PQIEPILSGNLPP FD+S+CRSVYVGNIHPQVT
Sbjct: 1 MQPQRLRQQAMMQP-SLY-HHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVT 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
++LLQE+FS+ G LEGCKLI+K+KSSYGFVDYFDR SAA AIVTLNGR+IFGQPIKVNWA
Sbjct: 59 DSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YASSQREDTSGHFN+FVGDLSPEVTDATL+ACFSV+P+CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQE 239
FRNQ+DAQSAINDL GKWLG+RQIRCNWA KGA++ DEKQ+SDS+SVVELTNG S DGQE
Sbjct: 179 FRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQTSDSRSVVELTNGSSEDGQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
+N+D PE NPQYTTVYVGNL+ EVTSVDLH+HFH+L GTIEDVRVQRDKGFGFVRYST
Sbjct: 239 TTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGTIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYER 359
H EAALAIQMGNARIL GKPIKCSWGSKPTPPGT+STPLPPP + ++ GFS LAAYER
Sbjct: 299 HAEAALAIQMGNARILFGKPIKCSWGSKPTPPGTASTPLPPPTSANVSGFSLASLAAYER 358
Query: 360 QIALSKIAGAQALMHPQAQHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
Q+ALSK+ GA ALMH Q QHALK +GMGA GA YD+ FQNVATTQ LMYY
Sbjct: 359 QMALSKMGGAHALMHQQGQHALKQVAMGMGAPGAG---YDAR-FQNVATTQHLMYY 410
>gi|356519889|ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 422
Score = 669 bits (1726), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/423 (78%), Positives = 361/423 (85%), Gaps = 13/423 (3%)
Query: 1 MQQHRLKQQTMMQQQSLYQ---------YHPSLLAAPQIEPILSGNLPPRFDASTCRSVY 51
MQ HRLKQQ QQQ+L Q YHP LLA PQIEP SGNLPP FD STCRSVY
Sbjct: 1 MQNHRLKQQQQQQQQALMQQALLQQQSLYHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVY 60
Query: 52 VGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIF 111
VGNIH QVT LLQEVFS TGP+EGCKLI+KDKSSYGF+ YFDRRSAALAI++LNGRH+F
Sbjct: 61 VGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF 120
Query: 112 GQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG 171
GQPIKVNWAYAS QREDTSGH+N+FVGDLSPEVTDATLFACFSV+P+CSDARVMWDQKTG
Sbjct: 121 GQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTG 180
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
RSRGFGFVSFRNQ+DAQS+INDL GKWLG+RQIRCNWA KGA +EKQ+SD+KSVVELT
Sbjct: 181 RSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATKGAGGNEEKQNSDAKSVVELT 240
Query: 232 NGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK 290
NG S DG+E SN DAPENNPQYTTVYVGNL+ EVT +DLHRHFHAL G +E+VRVQRDK
Sbjct: 241 NGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVMEEVRVQRDK 300
Query: 291 GFGFVRYSTHPEAALAIQMGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGF 349
GFGFVRYSTH EAALAIQMGNA+ +LCGKPIKCSWGSKPTPPGT+S PLPPP A LPG
Sbjct: 301 GFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPTPPGTASNPLPPPAAASLPGL 360
Query: 350 SATDLAAYERQIALSKIAGAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQL 409
SATDL AYERQ+A+SK+ G ALMHPQ QH LK A GASQAIYD GFQNVA QQ+
Sbjct: 361 SATDLLAYERQLAISKMGGVHALMHPQGQHHLKQA-AAIGASQAIYD-GGFQNVAAAQQM 418
Query: 410 MYY 412
MYY
Sbjct: 419 MYY 421
>gi|356547954|ref|XP_003542369.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 410
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/416 (78%), Positives = 362/416 (87%), Gaps = 11/416 (2%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ RL+Q M+Q SLY +HP+LL PQIEPILSGNLPP FD+S+CRSVYVGNIHPQVT
Sbjct: 1 MQPQRLRQHAMLQP-SLY-HHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVT 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
++LLQE+FS+ G LEGCKLI+K+KSSYGFVDYFDR SAA AIVTLNGR+IFGQPIKVNWA
Sbjct: 59 DSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YASSQREDTSGHFN+FVGDLSPEVTDATL+ACFSV+P+CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQE 239
FRNQ+DAQSAINDL GKWLG+RQIRCNWA KGA++ DEKQSSDSK VVEL NG S +GQE
Sbjct: 179 FRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
+N+D PE NPQYTTVYVGNL+ EVTSVDLH+HFH+L G IEDVRVQRDKGFGFVRYST
Sbjct: 239 TTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYER 359
H EAALAIQMGNARIL GKPIKCSWGSKPTP GT+STPL PP A ++PGFS LAAYER
Sbjct: 299 HAEAALAIQMGNARILFGKPIKCSWGSKPTPLGTASTPLLPPSA-NVPGFSLAGLAAYER 357
Query: 360 QIALSKIAGAQALMHPQAQHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
Q+ALSK+ GA LMH Q QHALK +GMGA G +D+ FQNVATTQ L+YY
Sbjct: 358 QMALSKMGGAHTLMHQQGQHALKHVDMGMGATGTG---FDAR-FQNVATTQHLVYY 409
>gi|356559021|ref|XP_003547800.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 416
Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/418 (77%), Positives = 350/418 (83%), Gaps = 9/418 (2%)
Query: 1 MQQHRLKQQTMMQQQSLYQ-----YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNI 55
MQ HRLKQQ Q YHP LLA PQIEPI SGNLPP FD STCRSVYVGNI
Sbjct: 1 MQNHRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 60
Query: 56 HPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPI 115
H QVT LLQEVF+ TGP+E CKLI+KDKSSYGF+ YFDRRSAALAI++LNGRH+FGQPI
Sbjct: 61 HTQVTEPLLQEVFAGTGPVEACKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLFGQPI 120
Query: 116 KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
KVNWAYAS QREDTSGH+N+FVGDLSPEVTDATLFACFSV+PTCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPTCSDARVMWDQKTGRSRG 180
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
FGFVSFRNQ+DAQSAINDL GKWLG+RQIRCNWA KGA +EKQ+SD+KSVVELT G S
Sbjct: 181 FGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGGTEEKQNSDAKSVVELTYGSS 240
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
DG+E SN DAPENNPQYTTVYVGNL+ E T +DLH HFH+L G IE+VRVQRDKGFGFV
Sbjct: 241 DGKETSNSDAPENNPQYTTVYVGNLAPEATQLDLHHHFHSLGAGVIEEVRVQRDKGFGFV 300
Query: 296 RYSTHPEAALAIQMGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDL 354
RYSTH EAALAIQMGNA+ +LCGK IKCSWGSKPTP GT+S PLPPP A LPG SATDL
Sbjct: 301 RYSTHAEAALAIQMGNAQSLLCGKQIKCSWGSKPTPAGTASNPLPPPAAASLPGLSATDL 360
Query: 355 AAYERQIALSKIAGAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
YERQ+A+SK+ G ALMHPQ QH LK A GASQAIYD GFQNVA QQ+MYY
Sbjct: 361 LVYERQLAMSKMGGVHALMHPQGQHPLK--QAAIGASQAIYD-GGFQNVAAAQQMMYY 415
>gi|255641747|gb|ACU21144.1| unknown [Glycine max]
Length = 397
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/393 (79%), Positives = 347/393 (88%), Gaps = 7/393 (1%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ RL+Q M+Q SLY +HP+LL PQIEPILSGNLPP FD+S+CRSVYVGNIHPQVT
Sbjct: 1 MQPQRLRQHAMLQP-SLY-HHPALLTPPQIEPILSGNLPPGFDSSSCRSVYVGNIHPQVT 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
++LLQE+FS+ G LEGCKLI+K+KSSYGFVDYFDR SAA AIVTLNGR+IFGQPIKVNWA
Sbjct: 59 DSLLQELFSTAGALEGCKLIRKEKSSYGFVDYFDRSSAAFAIVTLNGRNIFGQPIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YASSQREDTSGHFN+FVGDLSPEVTDATL+ACFSV+P+CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YASSQREDTSGHFNIFVGDLSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQE 239
FRNQ+DAQSAINDL GKWLG+RQIRCNWA KGA++ DEKQSSDSK VVEL NG S+ GQE
Sbjct: 179 FRNQQDAQSAINDLTGKWLGSRQIRCNWATKGASASDEKQSSDSKIVVELINGSSEEGQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
+N+D PE NPQYTTVYVGNL+ EVTSVDLH+HFH+L G IEDVRVQRDKGFGFVRYST
Sbjct: 239 TTNDDTPEKNPQYTTVYVGNLAPEVTSVDLHQHFHSLNAGIIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYER 359
H EAALAIQMGNARIL GKPIKCSWGSKPTP GT+STPL PP A ++PGFS LAAYER
Sbjct: 299 HAEAALAIQMGNARILFGKPIKCSWGSKPTPLGTASTPLLPPSA-NVPGFSLAGLAAYER 357
Query: 360 QIALSKIAGAQALMHPQAQHALK---LGMGAAG 389
Q+ALSK+ GA LMH Q QHALK +GMGA G
Sbjct: 358 QMALSKMGGAHTLMHQQGQHALKHVDMGMGATG 390
>gi|224119532|ref|XP_002331184.1| predicted protein [Populus trichocarpa]
gi|222873305|gb|EEF10436.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/397 (80%), Positives = 350/397 (88%), Gaps = 6/397 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+STGP+EGCKL
Sbjct: 31 YHPGLLA-PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKL 89
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGF+ YFDRR+AALAI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 90 IRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 149
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+ACFSV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDL GKWL
Sbjct: 150 LSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 209
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWAAKGA+S D+KQSSDSKSVVELTNG S D +E +N +APENNPQYTTVYVG
Sbjct: 210 GSRQIRCNWAAKGASSNDDKQSSDSKSVVELTNGTSEDCKEATNNEAPENNPQYTTVYVG 269
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL+ EV DLHRHFHAL G IE+VRVQRDKGFGFVR+STH EAALAIQMGN + L GK
Sbjct: 270 NLAPEVAQPDLHRHFHALGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSLFGK 329
Query: 319 PIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQ 378
+KCSWGSKPTPPGTSS PLPPP A LPG +ATD+ AYERQ+A+SK+ G ALMHPQ Q
Sbjct: 330 QMKCSWGSKPTPPGTSSNPLPPPAAAPLPGLTATDILAYERQLAISKMGGIHALMHPQGQ 389
Query: 379 HALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
H LK +GMGAAGASQAIYD GFQNVA QQLMYY
Sbjct: 390 HPLKQATMGMGAAGASQAIYD-GGFQNVAAAQQLMYY 425
>gi|217074564|gb|ACJ85642.1| unknown [Medicago truncatula]
gi|388521359|gb|AFK48741.1| unknown [Medicago truncatula]
Length = 407
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 325/415 (78%), Positives = 352/415 (84%), Gaps = 12/415 (2%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ HRL M QQQSLY HP LLA PQIEPI SGNLPP FD STCRSVYVGN+H QVT
Sbjct: 1 MQNHRL----MKQQQSLY--HPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVT 54
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQEVF+ TGP+EGCKL +K+KSSYGF+ YFDRRSAALAI+TLNGRH+FGQPIKVNWA
Sbjct: 55 EPLLQEVFAGTGPVEGCKLFRKEKSSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWA 114
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YAS QREDTSGH+N+FVGDLSPEVTDATLFACFSV+ +CSDARVMWDQKTGRSRGFGFVS
Sbjct: 115 YASGQREDTSGHYNIFVGDLSPEVTDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVS 174
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQE 239
FR+Q+DAQSAINDL GKWLG+RQIRCNWA K A +EKQ+SDSKSVVELTNG S DG+E
Sbjct: 175 FRSQQDAQSAINDLTGKWLGSRQIRCNWATKVAGGIEEKQNSDSKSVVELTNGSSEDGKE 234
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
S D PENNPQYTTVYVGNL SE T +DLHRHFHAL G IE+VRVQRDKGFGFVRYST
Sbjct: 235 ISGNDVPENNPQYTTVYVGNLGSEATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYST 294
Query: 300 HPEAALAIQMGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYE 358
H EAALAIQMGNA+ LCGK IKCSWGSKPTPPGT+S PLPPP A LPG SATD+ AYE
Sbjct: 295 HAEAALAIQMGNAQSYLCGKIIKCSWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYE 354
Query: 359 RQIALSKIAGAQ-ALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
RQ+A+SK+ G ALMHPQAQH LK A GASQAIYD GFQNVA QQ+MYY
Sbjct: 355 RQLAMSKMGGVHAALMHPQAQHPLK--QAAIGASQAIYD-GGFQNVAAAQQMMYY 406
>gi|6996560|emb|CAB75429.1| oligouridylate binding protein [Nicotiana plumbaginifolia]
Length = 406
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 309/395 (78%), Positives = 341/395 (86%), Gaps = 11/395 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPILSGNLPP FD+STCRSVYVGNIHPQVT LLQEVF+STGPLEGCKL
Sbjct: 21 YHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFASTGPLEGCKL 80
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+KDKSSYGFVDYFDRRSAALAIVTLNGRH+FGQPIKVNWAYAS+QREDTS H+N+FVGD
Sbjct: 81 IRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPIKVNWAYASAQREDTSNHYNIFVGD 140
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSV+ +CSDARVMWDQKTGRSRGFGFVSFRNQ++AQSAINDLNGKWL
Sbjct: 141 LSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGKWL 200
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEK-SNEDAPENNPQYTTVYV 257
G+RQIRCNWAAKGA + E Q+SD+KSVVELT+G S DGQEK NEDAPENNPQYTTVYV
Sbjct: 201 GSRQIRCNWAAKGAGAVGE-QNSDAKSVVELTSGTSDDGQEKVVNEDAPENNPQYTTVYV 259
Query: 258 GNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG 317
GNL+ EVTSVDLHRHFHAL G IEDVR+QRDKGFGFVRYS+H EAA AIQ+GNAR+L G
Sbjct: 260 GNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFGFVRYSSHAEAARAIQLGNARLLFG 319
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
KP+KCSWGSKPTPPG+SS PLPPP +PG SA DLAAY+RQ+AL+K+AGAQA M PQ
Sbjct: 320 KPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAMDLAAYQRQLALAKMAGAQAFMQPQG 379
Query: 378 QHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
Q GA G+ +A+TQ MY+
Sbjct: 380 QR--------IGAPGQGIYDGGYGGIASTQPPMYF 406
>gi|225442061|ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 420
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/398 (80%), Positives = 351/398 (88%), Gaps = 8/398 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD+STCRSVYVGNIH QV+ LLQEVF+STGP+EGCKL
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
++K+KSSYGF+ YFDRRSAALAI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 85 VRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 144
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSVFP+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAIND+ GKWL
Sbjct: 145 LSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWL 204
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA S D+KQSSD+KSVVELTNG S DG+E + +AP+NNPQYTTVYVG
Sbjct: 205 GSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVG 264
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHRHFH G IE+VRVQRDKGFGFVRY+TH EAALAIQMGN + ILCG
Sbjct: 265 NLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCG 324
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
KPIKCSWGSKPTPPGTSS PLPPP A LPG SATDL AYERQ+A+SK+ ALMHPQ
Sbjct: 325 KPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKM--GHALMHPQG 382
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH LK +GMGAAGASQAIYD GFQNVA QQLMYY
Sbjct: 383 QHPLKQAAMGMGAAGASQAIYD-GGFQNVAAAQQLMYY 419
>gi|297742974|emb|CBI35841.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/398 (80%), Positives = 351/398 (88%), Gaps = 8/398 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD+STCRSVYVGNIH QV+ LLQEVF+STGP+EGCKL
Sbjct: 12 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 71
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
++K+KSSYGF+ YFDRRSAALAI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 72 VRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 131
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSVFP+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAIND+ GKWL
Sbjct: 132 LSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWL 191
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA S D+KQSSD+KSVVELTNG S DG+E + +AP+NNPQYTTVYVG
Sbjct: 192 GSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVG 251
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHRHFH G IE+VRVQRDKGFGFVRY+TH EAALAIQMGN + ILCG
Sbjct: 252 NLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCG 311
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
KPIKCSWGSKPTPPGTSS PLPPP A LPG SATDL AYERQ+A+SK+ ALMHPQ
Sbjct: 312 KPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKM--GHALMHPQG 369
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH LK +GMGAAGASQAIYD GFQNVA QQLMYY
Sbjct: 370 QHPLKQAAMGMGAAGASQAIYD-GGFQNVAAAQQLMYY 406
>gi|449447926|ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 309/398 (77%), Positives = 341/398 (85%), Gaps = 7/398 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQ+EPI SGNLPP FD STCRSVYVGN+H QVT LLQEVF STG +E CKL
Sbjct: 26 YHPGLLAHPQLEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFGSTGLVESCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
++K+KSSYGF+ YFDRRSAA+AI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 86 VRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTD+TLFACFSVF +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDL GKWL
Sbjct: 146 LSPEVTDSTLFACFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA S D+KQSSD KS+ ELTNG S DG+E + DAPENNPQYTTVYVG
Sbjct: 206 GSRQIRCNWATKGAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQYTTVYVG 265
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ E T VDLHRHFH+L G IE+VR+QRDKGFGFVRYSTH EAALAIQMGN + LCG
Sbjct: 266 NLAPEATQVDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCG 325
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
K IKCSWGSKPTPPGT S PLPPP A + G S +DL AYERQ+A+SK+ G ALMHPQA
Sbjct: 326 KQIKCSWGSKPTPPGTISNPLPPPAAAPM-GLSTSDLLAYERQLAMSKMGGVHALMHPQA 384
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
H LK +GMGAAG+SQAIYD GFQNVA QQLMYY
Sbjct: 385 PHPLKQAAMGMGAAGSSQAIYD-GGFQNVAAAQQLMYY 421
>gi|255576617|ref|XP_002529199.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223531377|gb|EEF33213.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 422
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/398 (80%), Positives = 349/398 (87%), Gaps = 6/398 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+STGP+E CKL
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVESCKL 84
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGF+ YFDRRSAALAI++LNGRH+FGQPIKVNWAYAS QREDTSGH+N+FVGD
Sbjct: 85 IRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGD 144
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSV+ +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDL GKWL
Sbjct: 145 LSPEVTDATLFACFSVYHSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 204
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGATS D+KQSSD+KSVVELTNG S +G+E +N DAPENNPQYTTVYVG
Sbjct: 205 GSRQIRCNWATKGATSNDDKQSSDAKSVVELTNGSSEEGKETANNDAPENNPQYTTVYVG 264
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHRHFH+L G IE+VRVQRDKGFGFVR+STH EAALAIQMGN + IL G
Sbjct: 265 NLAPEVTQLDLHRHFHSLGAGVIEEVRVQRDKGFGFVRFSTHAEAALAIQMGNTQSILYG 324
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
K IKCSWGSKPTPPGTSS PLPPP A LPG SATDL YERQ+A+ K+ G ALMHPQ
Sbjct: 325 KQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLTYERQLAMGKMGGVHALMHPQG 384
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH LK +GMGAAGASQAIYD GFQNVA QQLMYY
Sbjct: 385 QHPLKQAAMGMGAAGASQAIYD-GGFQNVAAAQQLMYY 421
>gi|224073594|ref|XP_002304117.1| predicted protein [Populus trichocarpa]
gi|222841549|gb|EEE79096.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 626 bits (1614), Expect = e-177, Method: Compositional matrix adjust.
Identities = 316/398 (79%), Positives = 344/398 (86%), Gaps = 7/398 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+STGP+EGCKL
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFASTGPVEGCKL 84
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGF+ YFDRR+AALAI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 85 IRKEKSSYGFIHYFDRRAAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 144
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+ACFSV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDL GKWL
Sbjct: 145 LSPEVTDATLYACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 204
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA+KGA S ++KQSSDSKSVVELT G S DG E N +APENNPQYTTVYVG
Sbjct: 205 GSRQIRCNWASKGAGSNEDKQSSDSKSVVELTIGTSEDGMEAPNNEAPENNPQYTTVYVG 264
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NLS EVT LHRHFH L G IE+VRVQRDKGFGFVR+STH EAA+AIQMGNA+ +LCG
Sbjct: 265 NLSPEVTQPVLHRHFHVLGAGVIEEVRVQRDKGFGFVRFSTHAEAAVAIQMGNAQSLLCG 324
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
K IKCSWGSKPTPPGTSS PLPPP A LPG SATD+ AYERQ+ALSK+ G A M P
Sbjct: 325 KQIKCSWGSKPTPPGTSSNPLPPPAAAPLPGISATDILAYERQLALSKMGGVHAFMPPHG 384
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
Q LK +GMG AGASQAIYD GFQNVA QQLMYY
Sbjct: 385 QLPLKQAAMGMG-AGASQAIYD-GGFQNVAAAQQLMYY 420
>gi|147797981|emb|CAN65009.1| hypothetical protein VITISV_027348 [Vitis vinifera]
Length = 420
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 319/398 (80%), Positives = 350/398 (87%), Gaps = 8/398 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD+STCRSVYVGNIH QV+ LLQEVF+STGP+EGCKL
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDSSTCRSVYVGNIHTQVSEPLLQEVFASTGPVEGCKL 84
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
++K+KSSYGF+ YFDRRSAALAI++LNGRH+FGQPIKVNWAYAS QREDTSGHFN+FVGD
Sbjct: 85 VRKEKSSYGFIHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 144
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSVFP+CSDARVMWDQKTGRSRGFGFVSFRNQ+ AQSAIND+ GKWL
Sbjct: 145 LSPEVTDATLFACFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQVAQSAINDITGKWL 204
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA S D+KQSSD+KSVVELTNG S DG+E + +AP+NNPQYTTVYVG
Sbjct: 205 GSRQIRCNWATKGAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVG 264
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHRHFH G IE+VRVQRDKGFGFVRY+TH EAALAIQMGN + ILCG
Sbjct: 265 NLAPEVTQLDLHRHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCG 324
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
KPIKCSWGSKPTPPGTSS PLPPP A LPG SATDL AYERQ+A+SK+ ALMHPQ
Sbjct: 325 KPIKCSWGSKPTPPGTSSNPLPPPAAAPLPGLSATDLLAYERQLAMSKM--GHALMHPQG 382
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH LK +GMGAAGASQAIYD GFQNVA QQLMYY
Sbjct: 383 QHPLKQAAMGMGAAGASQAIYD-GGFQNVAAAQQLMYY 419
>gi|255550383|ref|XP_002516242.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223544728|gb|EEF46244.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 358
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 290/354 (81%), Positives = 320/354 (90%), Gaps = 5/354 (1%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ HRLKQQ MM HP+L+AAPQIEPILSGNLPP FD++TCRSVYVGNIHPQVT
Sbjct: 2 MQHHRLKQQAMMPYP-----HPALVAAPQIEPILSGNLPPGFDSTTCRSVYVGNIHPQVT 56
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQEVFS+TG +EGCKLI+K+KSSYGFVDYFDRRSAAL+IVTLNGRH+FGQPIKVNWA
Sbjct: 57 EPLLQEVFSNTGLIEGCKLIRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWA 116
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
YASSQREDTSGHFN+FVGDLSPEVTDATL+A F++FP+CSDARVMWDQKTGRSRGFGFVS
Sbjct: 117 YASSQREDTSGHFNIFVGDLSPEVTDATLYASFALFPSCSDARVMWDQKTGRSRGFGFVS 176
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEK 240
FRNQ+DAQ+AIN+LNGKW+G+RQIRCNWAAKG TS D+KQSSD+KSVVELTNG S+ ++
Sbjct: 177 FRNQQDAQNAINELNGKWIGSRQIRCNWAAKGTTSNDDKQSSDAKSVVELTNGTSEDSQE 236
Query: 241 SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTH 300
N+DAPENNPQYTTVYVGNL+ EVTSVDLHRHF+ L GTIEDVRVQRDKGFGFVRYSTH
Sbjct: 237 KNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFYGLGAGTIEDVRVQRDKGFGFVRYSTH 296
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDL 354
EAALAIQMGNARIL GKP+KCSWGSKPTPPGTSSTPLPPP A +PGF L
Sbjct: 297 AEAALAIQMGNARILYGKPVKCSWGSKPTPPGTSSTPLPPPAAVRMPGFQLLSL 350
>gi|449453379|ref|XP_004144435.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
Length = 422
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 304/399 (76%), Positives = 340/399 (85%), Gaps = 8/399 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FDASTCRSVYVGNIH QVT LLQEVF S GP+EGCKL
Sbjct: 25 YHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKL 84
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
++K+KSSYGFV YFDRRSAALAI++LNGRH+FGQPIKVNWAYASSQREDTSGHFN+FVGD
Sbjct: 85 VRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGD 144
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LFACFS + +CSDARVMWDQKTGRSRGFGFVSFRNQ++AQ+AINDL GKWL
Sbjct: 145 LSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWL 204
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWAAKGA ++KQ SD+KSVVEL+NG S DG+E N DAPENN QYTTVYVG
Sbjct: 205 GSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVG 264
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EV+ +DLHRHFH+L G IE+VR+QRDKGFGFVRY+TH EAALAIQMGN R LCG
Sbjct: 265 NLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCG 324
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ-ALMHPQ 376
+ IKCSWGSKPTPPGT+S PLP P PG SA DL AYERQ+A++K+ G ALMHPQ
Sbjct: 325 RQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQ 384
Query: 377 AQHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
H +K +GMGAA ASQA+YD GFQN+A QQLMYY
Sbjct: 385 GPHPMKQAPMGMGAAAASQALYD-GGFQNIA-AQQLMYY 421
>gi|357514131|ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
gi|355521376|gb|AET01830.1| RNA-binding protein [Medicago truncatula]
Length = 389
Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust.
Identities = 307/391 (78%), Positives = 337/391 (86%), Gaps = 6/391 (1%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK 84
+ +IEPI SGNLPP FD STCRSVYVGN+H QVT LLQEVF+ TGP+EGCKL +K+K
Sbjct: 1 MGVLRIEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEK 60
Query: 85 SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEV 144
SSYGF+ YFDRRSAALAI+TLNGRH+FGQPIKVNWAYAS QREDTSGH+N+FVGDLSPEV
Sbjct: 61 SSYGFIHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEV 120
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
TDATLFACFSV+ +CSDARVMWDQKTGRSRGFGFVSFR+Q+DAQSAINDL GKWLG+RQI
Sbjct: 121 TDATLFACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQI 180
Query: 205 RCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSE 263
RCNWA KGA +EKQ+SDSKSVVELTNG S DG+E S+ D PENNPQYTTVYVGNL SE
Sbjct: 181 RCNWATKGAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSE 240
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCGKPIKC 322
T +DLHRHFHAL G IE+VRVQRDKGFGFVRYSTH EAALAIQMGNA+ LCGK IKC
Sbjct: 241 ATQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKC 300
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ-ALMHPQAQHAL 381
SWGSKPTPPGT+S PLPPP A LPG SATD+ AYERQ+A+SK+ G ALMHPQAQH L
Sbjct: 301 SWGSKPTPPGTASNPLPPPAAAPLPGLSATDILAYERQLAMSKMGGVHAALMHPQAQHPL 360
Query: 382 KLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
K A GASQAIYD GFQNVA QQ+MYY
Sbjct: 361 K--QAAIGASQAIYD-GGFQNVAAAQQMMYY 388
>gi|297850132|ref|XP_002892947.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
gi|297338789|gb|EFH69206.1| hypothetical protein ARALYDRAFT_889143 [Arabidopsis lyrata subsp.
lyrata]
Length = 419
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 304/397 (76%), Positives = 342/397 (86%), Gaps = 8/397 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+STGP+E CKL
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFASTGPVESCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFV YFDRRSA LAI++LNGRH+FGQPIKVNWAYAS QREDTS HFN+FVGD
Sbjct: 86 IRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LF CFSV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AI+++ GKWL
Sbjct: 146 LSPEVTDAMLFNCFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGATSG++KQSSDSKSVVELT+G+S DG++ +N +APENN QYTTVYVG
Sbjct: 206 GSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVG 265
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EV+ VDLHRHFH+L G IE+VRVQRDKGFGFVRYSTH EAALAI MGN L G
Sbjct: 266 NLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAISMGNTHSYLSG 325
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALM-HPQ 376
+ +KCSWGSKPTPPGT+S PLPPP +PGFSA+DL AYERQ+A+SK+AG LM HPQ
Sbjct: 326 RQMKCSWGSKPTPPGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPLMHHPQ 385
Query: 377 AQHALK-LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QHALK MGA G++QAIYD GFQN QQLMYY
Sbjct: 386 GQHALKQAAMGATGSNQAIYD-GGFQNA---QQLMYY 418
>gi|357479379|ref|XP_003609975.1| RNA-binding protein [Medicago truncatula]
gi|355511030|gb|AES92172.1| RNA-binding protein [Medicago truncatula]
Length = 404
Score = 609 bits (1571), Expect = e-172, Method: Compositional matrix adjust.
Identities = 302/415 (72%), Positives = 339/415 (81%), Gaps = 15/415 (3%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
M + +Q M++Q SLYQ HP+L+ PQIEPILSGNLPP FD+STCRSVYVGNIHPQV+
Sbjct: 1 MLPQKFRQNPMIEQHSLYQ-HPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVS 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQE+FSS G LEGCKLI+K+KSSYGFVDYFDR SAA+AIVTLNGR+IFGQ IKVNWA
Sbjct: 59 EPLLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
Y QREDTSGHF++FVGDLSPEVTDATL+ACFS + +CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQE 239
FRNQ++AQSAINDL GKWLG+RQIRCNWA KGA E QSS+SKSVVELT+G S + QE
Sbjct: 179 FRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
+++D+PE NPQYTTVYVGNL+ EVTSVDLH HFHAL VGTIEDVRVQRDKGFGFVRYST
Sbjct: 239 MTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LPGFSATDLAAY 357
H EAALAIQMGN R L GKPIKCSWGSKPTPPGT+STPLPPP + H +PGFS LA Y
Sbjct: 299 HGEAALAIQMGNTRFLFGKPIKCSWGSKPTPPGTASTPLPPPASTHVPVPGFSPAGLALY 358
Query: 358 ERQIALSKIAGAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
ERQ+ALSK+ A HA+K + +GF NVATTQ LMYY
Sbjct: 359 ERQLALSKMNEA---------HAVKRA-AMGMGALGAGYGAGFPNVATTQHLMYY 403
>gi|18394471|ref|NP_564018.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|9665134|gb|AAF97318.1|AC007843_21 Putative RNA binding protein [Arabidopsis thaliana]
gi|21553830|gb|AAM62923.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
gi|111074422|gb|ABH04584.1| At1g17370 [Arabidopsis thaliana]
gi|332191458|gb|AEE29579.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 419
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 301/397 (75%), Positives = 340/397 (85%), Gaps = 8/397 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+ TGP+E CKL
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFV YFDRRSA LAI++LNGRH+FGQPIKVNWAYAS QREDTS HFN+FVGD
Sbjct: 86 IRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LF CFSV+PTCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AI+++ GKWL
Sbjct: 146 LSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGATSG++KQSSDSKSVVELT+G+S DG++ +N +APENN QYTTVYVG
Sbjct: 206 GSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSEDGKDTTNGEAPENNAQYTTVYVG 265
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EV+ VDLHRHFH+L G IE+VRVQRDKGFGFVRYSTH EAALAIQMGN L G
Sbjct: 266 NLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSG 325
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALM-HPQ 376
+ +KCSWGSKPTP GT+S PLPPP +PGFSA+DL AYERQ+A+SK+AG +M HPQ
Sbjct: 326 RQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQ 385
Query: 377 AQHALK-LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QHA K MGA G++QAIYD G+QN QQLMYY
Sbjct: 386 GQHAFKQAAMGATGSNQAIYD-GGYQNA---QQLMYY 418
>gi|297829972|ref|XP_002882868.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
gi|297328708|gb|EFH59127.1| hypothetical protein ARALYDRAFT_478823 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 299/398 (75%), Positives = 338/398 (84%), Gaps = 6/398 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP +LA PQ+EP+ SGNLPP FD STCRSVYVGNIH QVT LLQE+F+STGP+E KL
Sbjct: 33 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 92
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+KDKSSYGFV YFDRRSAALAI++LNGRH+FGQPIKVNWAYA+ QREDTS HFN+FVGD
Sbjct: 93 IRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGD 152
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+ FSVF +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN++NGKWL
Sbjct: 153 LSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWL 212
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
+RQIRCNWA KGATSGD+K SSD KSVVELT G S DG+E NE+APENN Q+TTVYVG
Sbjct: 213 SSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEEAPENNSQFTTVYVG 272
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHR+FHAL G IE+VRVQRDKGFGFVRY+THPEAALAIQMGN + L
Sbjct: 273 NLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFN 332
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
+ IKCSWG+KPTPPGT+S PLPPP +PG SA DL AYERQ+ALSK+A ALMHPQ
Sbjct: 333 RQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLAYERQLALSKMASVNALMHPQG 392
Query: 378 QHALKL---GMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH L+ G+ AAGA+ A+YD GFQNVA QQLMYY
Sbjct: 393 QHPLRQGAHGINAAGATAAMYD-GGFQNVAAAQQLMYY 429
>gi|82400162|gb|ABB72820.1| oligouridylate binding protein-like protein [Solanum tuberosum]
Length = 417
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 305/398 (76%), Positives = 340/398 (85%), Gaps = 12/398 (3%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSV+VGNIHPQVT LLQEVFSSTG +EGCKL
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVFVGNIHPQVTEPLLQEVFSSTGLVEGCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGF+ Y+DRRSAALAIV+LNGRH+FGQPIKVNWA+AS QREDTS HFN+FVGD
Sbjct: 86 IRKEKSSYGFIHYYDRRSAALAIVSLNGRHLFGQPIKVNWAFASGQREDTSSHFNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LFACFSV+P CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDL GKWL
Sbjct: 146 LSPEVTDAMLFACFSVYPGCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA S D+KQSSD+KSVVELTNG S DG+E +N DAPENNPQYTTVYVG
Sbjct: 206 GSRQIRCNWATKGANSNDDKQSSDAKSVVELTNGSSEDGKEAANSDAPENNPQYTTVYVG 265
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
N++ EVT +DLHR+FHAL G IE++R+QRDKGFGFVRY+TH EAALAIQMGN +L G
Sbjct: 266 NIAPEVTQLDLHRYFHALGAGVIEEIRIQRDKGFGFVRYNTHAEAALAIQMGNTHSVLGG 325
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
+ IKCSWG+KPTPPGT+S PPPAP G SATDL AYERQ+A+SK+ G LM
Sbjct: 326 RQIKCSWGNKPTPPGTTSN-PLPPPAPTPLGISATDLLAYERQLAMSKMGGVPGLM---G 381
Query: 378 QHALK---LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
Q+ LK +GM A+GASQAIYD GFQNVA QQLMYY
Sbjct: 382 QYPLKQASMGM-ASGASQAIYD-GGFQNVA-AQQLMYY 416
>gi|186478580|ref|NP_001117301.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
gi|332191459|gb|AEE29580.1| oligouridylate binding protein 1B [Arabidopsis thaliana]
Length = 416
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 300/396 (75%), Positives = 338/396 (85%), Gaps = 9/396 (2%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP LLA PQIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+ TGP+E CKL
Sbjct: 26 YHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFV YFDRRSA LAI++LNGRH+FGQPIKVNWAYAS QREDTS HFN+FVGD
Sbjct: 86 IRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LF CFSV+PTCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AI+++ GKWL
Sbjct: 146 LSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEITGKWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGN 259
G+RQIRCNWA KGATSG++KQSSDSKSVVELT+G DG++ +N +APENN QYTTVYVGN
Sbjct: 206 GSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG--DGKDTTNGEAPENNAQYTTVYVGN 263
Query: 260 LSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCGK 318
L+ EV+ VDLHRHFH+L G IE+VRVQRDKGFGFVRYSTH EAALAIQMGN L G+
Sbjct: 264 LAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTHVEAALAIQMGNTHSYLSGR 323
Query: 319 PIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALM-HPQA 377
+KCSWGSKPTP GT+S PLPPP +PGFSA+DL AYERQ+A+SK+AG +M HPQ
Sbjct: 324 QMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQG 383
Query: 378 QHALK-LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QHA K MGA G++QAIYD G+QN QQLMYY
Sbjct: 384 QHAFKQAAMGATGSNQAIYD-GGYQNA---QQLMYY 415
>gi|21593280|gb|AAM65229.1| oligouridylate binding protein, putative [Arabidopsis thaliana]
Length = 427
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 297/397 (74%), Positives = 336/397 (84%), Gaps = 5/397 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP +LA PQ+EP+ SGNLPP FD STCRSVYVGNIH QVT LLQE+F+STGP+E KL
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+KDKSSYGFV YFDRRSAALAI++LNGRH+FGQPIKVNWAYA+ QREDTS HFN+FVGD
Sbjct: 91 IRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGD 150
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+ FSVF +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN++NGKWL
Sbjct: 151 LSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWL 210
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
+RQIRCNWA KGATSGD+K SSD KSVVELT G S DG+E NE+ PENN Q+TTVYVG
Sbjct: 211 SSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVG 270
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHR+FHAL G IE+VRVQRDKGFGFVRY+THPEAALAIQMGN + L
Sbjct: 271 NLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFN 330
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
+ IKCSWG+KPTPPGT+S PLPPP +PG SA DL YERQ+ALSK+A ALMHPQ
Sbjct: 331 RQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHPQG 390
Query: 378 QHALKL--GMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH L+ G+ AAGA+ A+YD GFQNVA QQLMYY
Sbjct: 391 QHPLRQAHGINAAGATAAMYD-GGFQNVAAAQQLMYY 426
>gi|357479381|ref|XP_003609976.1| RNA-binding protein [Medicago truncatula]
gi|355511031|gb|AES92173.1| RNA-binding protein [Medicago truncatula]
Length = 415
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 302/426 (70%), Positives = 339/426 (79%), Gaps = 26/426 (6%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
M + +Q M++Q SLYQ HP+L+ PQIEPILSGNLPP FD+STCRSVYVGNIHPQV+
Sbjct: 1 MLPQKFRQNPMIEQHSLYQ-HPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVS 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQE+FSS G LEGCKLI+K+KSSYGFVDYFDR SAA+AIVTLNGR+IFGQ IKVNWA
Sbjct: 59 EPLLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
Y QREDTSGHF++FVGDLSPEVTDATL+ACFS + +CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQE 239
FRNQ++AQSAINDL GKWLG+RQIRCNWA KGA E QSS+SKSVVELT+G S + QE
Sbjct: 179 FRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQE 238
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
+++D+PE NPQYTTVYVGNL+ EVTSVDLH HFHAL VGTIEDVRVQRDKGFGFVRYST
Sbjct: 239 MTSDDSPEKNPQYTTVYVGNLAPEVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYST 298
Query: 300 HPEAALAIQMGNARILCGKPI-----------KCSWGSKPTPPGTSSTPLPPPPAPH--L 346
H EAALAIQMGN R L GKPI KCSWGSKPTPPGT+STPLPPP + H +
Sbjct: 299 HGEAALAIQMGNTRFLFGKPIKMHITRKKAVSKCSWGSKPTPPGTASTPLPPPASTHVPV 358
Query: 347 PGFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATT 406
PGFS LA YERQ+ALSK+ A HA+K + +GF NVATT
Sbjct: 359 PGFSPAGLALYERQLALSKMNEA---------HAVKRA-AMGMGALGAGYGAGFPNVATT 408
Query: 407 QQLMYY 412
Q LMYY
Sbjct: 409 QHLMYY 414
>gi|15231783|ref|NP_188026.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9294635|dbj|BAB02974.1| RNA binding protein nucleolysin; oligouridylate binding protein
[Arabidopsis thaliana]
gi|22655004|gb|AAM98093.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|28416511|gb|AAO42786.1| AT3g14100/MAG2_5 [Arabidopsis thaliana]
gi|332641947|gb|AEE75468.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 427
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 296/397 (74%), Positives = 335/397 (84%), Gaps = 5/397 (1%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP +LA PQ+EP+ SGNLPP FD STCRSVYVGNIH QVT LLQE+F+STGP+E KL
Sbjct: 31 YHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEIFTSTGPVESSKL 90
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+KDKSSYGFV YFDRRSAALAI++LNGRH+FGQPIKVNWAYA+ QREDTS HFN+FVGD
Sbjct: 91 IRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYATGQREDTSSHFNIFVGD 150
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+ FSVF +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN++NGKWL
Sbjct: 151 LSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWL 210
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
+RQIRCNWA KGATSGD+K SSD KSVVELT G S DG+E NE+ PENN Q+TTVYVG
Sbjct: 211 SSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETLNEETPENNSQFTTVYVG 270
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NL+ EVT +DLHR+FHAL G IE+VRVQRDKGFGFVRY+THPEAALAIQMGN + L
Sbjct: 271 NLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFVRYNTHPEAALAIQMGNTQPYLFN 330
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
+ IKCSWG+KPTPPGT+S PLPPP +PG SA DL YERQ+ALSK+A ALMH Q
Sbjct: 331 RQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADLLNYERQLALSKMASVNALMHQQG 390
Query: 378 QHALKL--GMGAAGASQAIYDSSGFQNVATTQQLMYY 412
QH L+ G+ AAGA+ A+YD GFQNVA QQLMYY
Sbjct: 391 QHPLRQAHGINAAGATAAMYD-GGFQNVAAAQQLMYY 426
>gi|357156104|ref|XP_003577343.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 451
Score = 600 bits (1548), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/407 (72%), Positives = 337/407 (82%), Gaps = 20/407 (4%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
HP LLAAPQIEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI
Sbjct: 50 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLI 109
Query: 81 KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDL 140
+K+KSS+GFVDY+DRRSAALAIV+LNGR +FGQPIKVNWAYAS+QREDTSGHFN+FVGDL
Sbjct: 110 RKEKSSFGFVDYYDRRSAALAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDL 169
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEVTDA LFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLG
Sbjct: 170 CPEVTDAALFAFFSAYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINELNGKWLG 229
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGN 259
NRQIRCNWA KGA +G+EKQ++DSK +VEL NG S+ G+E +NED PENNPQYTTVYVGN
Sbjct: 230 NRQIRCNWATKGANAGEEKQNTDSKGMVELINGSSEAGKENANEDGPENNPQYTTVYVGN 289
Query: 260 LSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKP 319
L ++ S D+HR FH L G+IE+VRV RDKGFGFVRYSTH EAALAIQ GN +++ G+
Sbjct: 290 LPHDINSNDVHRFFHLLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLVGGRQ 349
Query: 320 IKCSWGSKPTPPGTSSTPLPPPP---APHLPGFSATDLAAYERQIALSKIAGAQALMHPQ 376
IKCSWGSKPTPPGT+S PLPPP AP+ PG SA DL +YER +ALSK+AG ALM
Sbjct: 350 IKCSWGSKPTPPGTASAPLPPPALAVAPYTPGVSAADLFSYERSLALSKMAGNPALM--- 406
Query: 377 AQHA----LKLGMGAAGASQAIYDSSGFQNV-------ATTQQLMYY 412
QHA +GMG AGASQAIYD GFQ V QQLMYY
Sbjct: 407 GQHAALRQAAMGMG-AGASQAIYD-GGFQGVNPQQQQQQQQQQLMYY 451
>gi|449517663|ref|XP_004165864.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 394
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 297/390 (76%), Positives = 333/390 (85%), Gaps = 8/390 (2%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
QIEPI SGNLPP FDASTCRSVYVGNIH QVT LLQEVF S GP+EGCKL++K+KSSYG
Sbjct: 6 QIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYG 65
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FV YFDRRSAALAI++LNGRH+FGQPIKVNWAYASSQREDTSGHFN+FVGDLSPEVTDA
Sbjct: 66 FVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAM 125
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
LFACFS + +CSDARVMWDQKTGRSRGFGFVSFRNQ++AQ+AINDL GKWLG+RQIRCNW
Sbjct: 126 LFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNW 185
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
AAKGA ++KQ SD+KSVVEL+NG S DG+E N DAPENN QYTTVYVGNL+ EV+ +
Sbjct: 186 AAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQL 245
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCGKPIKCSWGS 326
DLHRHFH+L G IE+VR+QRDKGFGFVRY+TH EAALAIQMGN R LCG+ IKCSWGS
Sbjct: 246 DLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGS 305
Query: 327 KPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQ-ALMHPQAQHALK--- 382
KPTPPGT+S PLP P PG SA DL AYERQ+A++K+ G ALMHPQ H +K
Sbjct: 306 KPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQAP 365
Query: 383 LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+GMGAA ASQA+YD GFQN+A QQLMYY
Sbjct: 366 MGMGAAAASQALYD-GGFQNIA-AQQLMYY 393
>gi|15221031|ref|NP_175810.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|4587549|gb|AAD25780.1|AC006577_16 Similar to gb|U55861 RNA binding protein nucleolysin (TIAR) from
Mus musculus and contains several PF|00076 RNA
recognition motif domains. ESTs gb|T21032 and gb|T44127
come from this gene [Arabidopsis thaliana]
gi|13194792|gb|AAK15558.1|AF348587_1 putative oligouridylate binding protein [Arabidopsis thaliana]
gi|13605627|gb|AAK32807.1|AF361639_1 At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|22137190|gb|AAM91440.1| At1g54080/F15I1_16 [Arabidopsis thaliana]
gi|332194924|gb|AEE33045.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 426
Score = 575 bits (1482), Expect = e-161, Method: Compositional matrix adjust.
Identities = 289/407 (71%), Positives = 333/407 (81%), Gaps = 14/407 (3%)
Query: 12 MQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSST 71
M QQ YHP ++A PQ+EP+ SGNLPP FD +TCRSVY GNIH QVT LLQE+F+ST
Sbjct: 27 MMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFAST 86
Query: 72 GPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
GP+E CKLI+KDKSSYGFV YFDRR A++AI+TLNGRHIFGQP+KVNWAYA+ QREDTS
Sbjct: 87 GPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSS 146
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
HFN+FVGDLSPEVTDA LF FS F +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AI
Sbjct: 147 HFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAI 206
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNP 250
N++NGKW+ +RQIRCNWA KGAT G++K SSD KSVVELTNG S DG+E SNEDAPENNP
Sbjct: 207 NEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNP 266
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
Q+TTVYVGNLS EVT +DLHR F+ L G IE+VRVQRDKGFGFVRY+TH EAALAIQMG
Sbjct: 267 QFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMG 326
Query: 311 NAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGA 369
NA+ L + I+CSWG+KPTP GT+S PLPPP +P SA DL AYERQ+AL+K
Sbjct: 327 NAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK---- 382
Query: 370 QALMHPQAQHALK---LGMGAAGASQAIYDSSGFQNVATT-QQLMYY 412
MHPQAQH+L+ LG+ AG + A+YD G+QNVA QQLMYY
Sbjct: 383 ---MHPQAQHSLRQAGLGVNVAGGTAAMYD-GGYQNVAAAHQQLMYY 425
>gi|297853192|ref|XP_002894477.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
gi|297340319|gb|EFH70736.1| hypothetical protein ARALYDRAFT_474538 [Arabidopsis lyrata subsp.
lyrata]
Length = 417
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 288/396 (72%), Positives = 326/396 (82%), Gaps = 13/396 (3%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
YHP ++A PQ+EP+ SGNLPP FD +TCRSVY GNIH QVT LLQE+F+STGP+E CKL
Sbjct: 31 YHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFASTGPIESCKL 90
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+KDKSSYGFV YFDRR A++AI+TLNGRHIFGQP+KVNWAYA+ QREDTS HFN+FVGD
Sbjct: 91 IRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSSHFNIFVGD 150
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDA LF FS F +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN++NGKWL
Sbjct: 151 LSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMNGKWL 210
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
+RQIRCNWA KGAT G++K SSD KSVVELTNG S DG+E SNEDAPENNPQYTTVYVG
Sbjct: 211 SSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAPENNPQYTTVYVG 270
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCG 317
NLS EVT +DLHR F+ L G IE+VRVQRDKGFGFVRY+TH EAALAIQMGNA+ L
Sbjct: 271 NLSPEVTQLDLHRLFYTLGAGAIEEVRVQRDKGFGFVRYNTHDEAALAIQMGNAQPYLFS 330
Query: 318 KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQA 377
+ IKCSWG+KPTP GT+S PLPPP +P SA DL AYERQ+ L+K MHPQA
Sbjct: 331 RQIKCSWGNKPTPSGTASNPLPPPAPVPVPALSAMDLLAYERQLVLAK-------MHPQA 383
Query: 378 QHALKLGMGAAGASQAIYDSSGFQNVATT-QQLMYY 412
QH+L+ AG S A+YD GFQNVA QQLMYY
Sbjct: 384 QHSLR--QAGAGGSAAMYD-GGFQNVAAAHQQLMYY 416
>gi|224121456|ref|XP_002330832.1| predicted protein [Populus trichocarpa]
gi|222872634|gb|EEF09765.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 279/413 (67%), Positives = 333/413 (80%), Gaps = 22/413 (5%)
Query: 19 QYHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG 76
+HP+L+AA Q+EPI GNLPP FD+S+CRSVYVGNIH VT+ LL EVF++ GPL G
Sbjct: 5 HHHPALVAAAMSQMEPIPGGNLPPGFDSSSCRSVYVGNIHVNVTDKLLAEVFATAGPLAG 64
Query: 77 CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
CKLI+KDKSSYGFVDY DR SAALAI+TL+GR ++G+ +KVNWAYAS QREDTSGHF++F
Sbjct: 65 CKLIRKDKSSYGFVDYHDRSSAALAIMTLHGRQLYGEALKVNWAYASGQREDTSGHFHIF 124
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VGDLSPEVTDATL+ACFSVFP+CSDARVMWD KTGRS+G+GFVSFRNQ++AQSAINDL G
Sbjct: 125 VGDLSPEVTDATLYACFSVFPSCSDARVMWDHKTGRSKGYGFVSFRNQQEAQSAINDLTG 184
Query: 197 KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYTTV 255
KWLGNRQIRCNWA KG S ++KQ+SD+++ V LTNG S G QE +NE+APENNP YTTV
Sbjct: 185 KWLGNRQIRCNWATKGVGSNEDKQNSDNQNAVVLTNGSSAGSQENTNEEAPENNPAYTTV 244
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNLS VT +LH +FHAL G IE+VRVQRDKGFGFVRY+TH EAA AIQMGN +I+
Sbjct: 245 YVGNLSHVVTQAELHGNFHALGAGVIEEVRVQRDKGFGFVRYNTHEEAAFAIQMGNGKIV 304
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPHL--------PGFSATDLAAYERQIALSKIA 367
CGKP+KCSWGSKPTPPGT+S PLPPP P+ G+SA DL AY+RQ+ALS+ A
Sbjct: 305 CGKPMKCSWGSKPTPPGTASNPLPPPAQPYQIAPSTGINQGYSAADLLAYQRQLALSQAA 364
Query: 368 GA----QALMHPQAQHAL---KLGMGAAGASQAIYDSSGFQN-VATTQQLMYY 412
+ QAL+ QH L +G+ ++G SQA+YD G+ N +A QQLMYY
Sbjct: 365 ASGLSGQALVQLTGQHGLSAASMGLSSSG-SQALYD--GYPNSLAAAQQLMYY 414
>gi|30695647|ref|NP_849806.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
gi|332194923|gb|AEE33044.1| oligouridylate-binding protein 1A [Arabidopsis thaliana]
Length = 430
Score = 569 bits (1467), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/411 (70%), Positives = 333/411 (81%), Gaps = 18/411 (4%)
Query: 12 MQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSST 71
M QQ YHP ++A PQ+EP+ SGNLPP FD +TCRSVY GNIH QVT LLQE+F+ST
Sbjct: 27 MMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNIHTQVTEILLQEIFAST 86
Query: 72 GPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
GP+E CKLI+KDKSSYGFV YFDRR A++AI+TLNGRHIFGQP+KVNWAYA+ QREDTS
Sbjct: 87 GPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPMKVNWAYATGQREDTSS 146
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCS----DARVMWDQKTGRSRGFGFVSFRNQEDA 187
HFN+FVGDLSPEVTDA LF FS F +CS DARVMWDQKTGRSRGFGFVSFRNQ+DA
Sbjct: 147 HFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDA 206
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAP 246
Q+AIN++NGKW+ +RQIRCNWA KGAT G++K SSD KSVVELTNG S DG+E SNEDAP
Sbjct: 207 QTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGRELSNEDAP 266
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
ENNPQ+TTVYVGNLS EVT +DLHR F+ L G IE+VRVQRDKGFGFVRY+TH EAALA
Sbjct: 267 ENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGFVRYNTHDEAALA 326
Query: 307 IQMGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSK 365
IQMGNA+ L + I+CSWG+KPTP GT+S PLPPP +P SA DL AYERQ+AL+K
Sbjct: 327 IQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMDLLAYERQLALAK 386
Query: 366 IAGAQALMHPQAQHALK---LGMGAAGASQAIYDSSGFQNVATT-QQLMYY 412
MHPQAQH+L+ LG+ AG + A+YD G+QNVA QQLMYY
Sbjct: 387 -------MHPQAQHSLRQAGLGVNVAGGTAAMYD-GGYQNVAAAHQQLMYY 429
>gi|225429862|ref|XP_002283326.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
Length = 436
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 279/413 (67%), Positives = 328/413 (79%), Gaps = 20/413 (4%)
Query: 18 YQYHPSLLAAP---QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPL 74
+ YHP +LAA Q+EP+ SGNLPP FD+S+CRSVYVGNIH VT LL EVF S GPL
Sbjct: 25 HMYHPGVLAAAAMSQMEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPL 84
Query: 75 EGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN 134
GCKLI+KDKSSYGFVDY DR SA+LAI+TL+GR ++GQ +KVNWAYAS QREDTSGHFN
Sbjct: 85 AGCKLIRKDKSSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFN 144
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVGDLSPEVTDATL+ACFSVF +CSDARVMWD KTGRS+G+GFVSFRNQ+DAQSAINDL
Sbjct: 145 IFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDL 204
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYT 253
+GKWLGNRQIRCNWA KGA ++KQ +++++ V LTNG SDG QE +NE+APENNP YT
Sbjct: 205 SGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYT 264
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR 313
TVYVGNLS EVT +LH FHAL G IE+VR+QRDKGFGFVRY TH EAALAIQM N R
Sbjct: 265 TVYVGNLSHEVTQAELHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGR 324
Query: 314 ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQIALSK 365
I+ GK +KCSWGSKPTP GT+S PLPPP P+ LP G+S +L AY+RQ+ALS+
Sbjct: 325 IVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQ 384
Query: 366 IAGA----QALMHPQAQHALKLG-MG-AAGASQAIYDSSGFQNVATTQQLMYY 412
A + QALM H L G MG ++G +QA+YD G+ N ++ QQLMYY
Sbjct: 385 AAASSLSGQALMQMTGHHGLAAGSMGVSSGGTQAMYD--GYPNNSSGQQLMYY 435
>gi|224115710|ref|XP_002332123.1| predicted protein [Populus trichocarpa]
gi|222874943|gb|EEF12074.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 565 bits (1457), Expect = e-158, Method: Compositional matrix adjust.
Identities = 280/427 (65%), Positives = 334/427 (78%), Gaps = 23/427 (5%)
Query: 6 LKQQTMMQQQSLYQYHPSLLAAP--QIEPILSGNLPPRFD-ASTCRSVYVGNIHPQVTNA 62
++QQ ++Q +Y +HP+L+A+ Q+EPIL GNLPP FD +S+CR VYVGNIH VT+
Sbjct: 1 MQQQALLQHHHMY-HHPALVASAMSQMEPILGGNLPPAFDPSSSCRRVYVGNIHVNVTDK 59
Query: 63 LLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA 122
LL EVF++ GPL GCKLI+KDKSSYGFVDY D+ SAALAI+TL+GR ++GQ +KVNWAY
Sbjct: 60 LLAEVFATAGPLAGCKLIRKDKSSYGFVDYHDQSSAALAIMTLHGRQLYGQALKVNWAYG 119
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+SQREDTSGHF+VFVGDLSPEV DA LFACFSVFP+CS+ARVMWD KTGRS+G+GFVSFR
Sbjct: 120 NSQREDTSGHFHVFVGDLSPEVIDANLFACFSVFPSCSNARVMWDHKTGRSKGYGFVSFR 179
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKS 241
NQ++AQSAINDL GKWLGNRQIRCNWA KG S ++KQ+SD+++ V LTNG S+ GQE +
Sbjct: 180 NQQEAQSAINDLTGKWLGNRQIRCNWATKGVESNEDKQNSDNQNAVVLTNGSSEGGQEST 239
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHP 301
NE+APENNP YTTVYVGNLS EVT +LHRHFHAL G IEDVRVQRDKGFGFVRY+TH
Sbjct: 240 NEEAPENNPAYTTVYVGNLSHEVTQAELHRHFHALGAGVIEDVRVQRDKGFGFVRYNTHE 299
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP----------PPPAPHLPGFSA 351
EAA AIQ GN +I+CGKP+KCSWGSKPTPPGT+S PLP P G+SA
Sbjct: 300 EAASAIQTGNGKIVCGKPVKCSWGSKPTPPGTASNPLPPPPPAQPYQIAPSTGINQGYSA 359
Query: 352 TDLAAYERQIALSKIAGA----QALMHPQAQHALKLGMG--AAGASQAIYDSSGFQNVAT 405
DL AY+RQ+ALS+ A + QAL+ QH L +AG SQA+YD G+ N
Sbjct: 360 ADLLAYQRQLALSQAAASGLSGQALLQLAGQHGLAAASMDLSAGGSQAMYD--GYHNGLA 417
Query: 406 TQQLMYY 412
QQLMYY
Sbjct: 418 AQQLMYY 424
>gi|255574179|ref|XP_002528005.1| nucleolysin tia-1, putative [Ricinus communis]
gi|223532631|gb|EEF34417.1| nucleolysin tia-1, putative [Ricinus communis]
Length = 417
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 279/419 (66%), Positives = 330/419 (78%), Gaps = 21/419 (5%)
Query: 12 MQQQSLYQYHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFS 69
M QQ + YHP +LAA Q+EPI SGNLPP FD+S CRSVYVGNIH VT LL EVF
Sbjct: 1 MLQQHHHMYHPGVLAAAMSQMEPIPSGNLPPGFDSSACRSVYVGNIHVNVTEKLLAEVFQ 60
Query: 70 STGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT 129
+ GPL GCKLI+KDKSSYGFVDY DR AA+AI+TL+GR ++GQ +KVNWAYA+SQREDT
Sbjct: 61 TAGPLAGCKLIRKDKSSYGFVDYHDRSCAAVAIMTLHGRQLYGQALKVNWAYANSQREDT 120
Query: 130 SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQS 189
SGHF++FVGDLSPEVTDATLFACFSV+ +CSDARVMWD KTGRS+G+GFVSFRNQ +AQS
Sbjct: 121 SGHFHIFVGDLSPEVTDATLFACFSVYNSCSDARVMWDHKTGRSKGYGFVSFRNQREAQS 180
Query: 190 AINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPEN 248
AINDL+GKWLGNRQIRCNWA KG+ S ++KQ D+++ V LT+G S+ GQE +NEDAPEN
Sbjct: 181 AINDLSGKWLGNRQIRCNWATKGSASNEDKQIGDNQNAVILTSGSSEGGQENANEDAPEN 240
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
NP YTTVYVGNL EVT +LH FH L G IE+VRVQRDKGFGFVRY+TH EAA AIQ
Sbjct: 241 NPAYTTVYVGNLCHEVTQSELHCQFHTLGAGIIEEVRVQRDKGFGFVRYTTHEEAASAIQ 300
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQ 360
M N +I+ GKP+KCSWGSKPTPPGT+S PLPPP P+ LP G+SATDL Y+RQ
Sbjct: 301 MANGKIVRGKPMKCSWGSKPTPPGTASNPLPPPIQPYQVLPSSGMNHGYSATDLLVYQRQ 360
Query: 361 IALSKIAGA----QALMHPQAQHAL---KLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ALS+ A + QAL+ QH L +G+ +G SQA+YD G+ N ++ QQLMYY
Sbjct: 361 LALSQAAASGLSGQALVQLTGQHGLAAASMGLN-SGGSQALYD--GYPNNSSGQQLMYY 416
>gi|8778484|gb|AAF79492.1|AC022492_36 F1L3.2 [Arabidopsis thaliana]
Length = 575
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/451 (64%), Positives = 335/451 (74%), Gaps = 71/451 (15%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
QIEPI SGNLPP FD STCRSVYVGNIH QVT LLQEVF+ TGP+E CKLI+K+KSSYG
Sbjct: 128 QIEPIPSGNLPPGFDPSTCRSVYVGNIHIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYG 187
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FV YFDRRSA LAI++LNGRH+FGQPIKVNWAYAS QREDTS HFN+FVGDLSPEVTDA
Sbjct: 188 FVHYFDRRSAGLAILSLNGRHLFGQPIKVNWAYASGQREDTSSHFNIFVGDLSPEVTDAM 247
Query: 149 LFACFSVFPTCS-------------DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL- 194
LF CFSV+PTCS DARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AI+++
Sbjct: 248 LFTCFSVYPTCSFAETLPTIAIVCRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAIDEIT 307
Query: 195 ------------------NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS- 235
+GKWLG+RQIRCNWA KGATSG++KQSSDSKSVVELT+G+S
Sbjct: 308 GECCNLFSPLIVDILFCFSGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVSE 367
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
DG++ +N +APENN QYTTVYVGNL+ EV+ VDLHRHFH+L G IE+VRVQRDKGFGFV
Sbjct: 368 DGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFV 427
Query: 296 RYSTHPEAALAIQMGNA--------------------------------RILCGKPIKCS 323
RYSTH EAALAIQMGN ++LC ++CS
Sbjct: 428 RYSTHVEAALAIQMGNTHSYLSGRQMKVKLTNLNCSFVGLTILFGLGMLKLLCSLFLQCS 487
Query: 324 WGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALM-HPQAQHALK 382
WGSKPTP GT+S PLPPP +PGFSA+DL AYERQ+A+SK+AG +M HPQ QHA K
Sbjct: 488 WGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYERQLAMSKMAGMNPMMHHPQGQHAFK 547
Query: 383 -LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
MGA G++QAIYD G+QN QQLMYY
Sbjct: 548 QAAMGATGSNQAIYD-GGYQN---AQQLMYY 574
>gi|297738530|emb|CBI27775.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/303 (86%), Positives = 285/303 (94%), Gaps = 1/303 (0%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
+HP LLA PQIEPILSGNLPP FD+STCRSVYVGNIHPQVT LLQEVFSSTGPLEGCKL
Sbjct: 26 HHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKL 85
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
I+K+KSSYGFVDYFDRRSAAL+IVTLNGRH+FGQPIKVNWAYASSQREDTSGH+N+FVGD
Sbjct: 86 IRKEKSSYGFVDYFDRRSAALSIVTLNGRHLFGQPIKVNWAYASSQREDTSGHYNIFVGD 145
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATLFACFSV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ++AQSAINDLNG+WL
Sbjct: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQSAINDLNGRWL 205
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVG 258
G+RQIRCNWA KGA ++K +SD+KSVVELTNG S DG++KSN++APENN QYTTVYVG
Sbjct: 206 GSRQIRCNWATKGAGGNEDKPNSDAKSVVELTNGTSEDGKDKSNDEAPENNLQYTTVYVG 265
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL+ EVTSVDLHRHFHAL G IEDVRVQRDKGFGFVRYSTH EAALAIQMGNARILCGK
Sbjct: 266 NLAPEVTSVDLHRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGK 325
Query: 319 PIK 321
PIK
Sbjct: 326 PIK 328
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 39/204 (19%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++ P+VT+ L FS +++ +K+ +GFV + ++ A
Sbjct: 49 DSSTCRSVYVGNIHPQVTEPLLQEVFSSTGPLEGCKLIRKEKSS----YGFVDYFDRRSA 104
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+I LNG+ L + I+ NWA + S E T+G
Sbjct: 105 ALSIVTLNGRHLFGQPIKVNWAY-------------ASSQREDTSG-------------- 137
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHAL--C--VGTIEDVRVQRDKGFGFVRYSTHPEA 303
+ ++VG+LS EVT L F C + D + R +GFGFV + EA
Sbjct: 138 ----HYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQEA 193
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
AI N R L + I+C+W +K
Sbjct: 194 QSAINDLNGRWLGSRQIRCNWATK 217
>gi|296081803|emb|CBI20808.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/398 (68%), Positives = 319/398 (80%), Gaps = 17/398 (4%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF 89
+EP+ SGNLPP FD+S+CRSVYVGNIH VT LL EVF S GPL GCKLI+KDKSSYGF
Sbjct: 1 MEPVPSGNLPPGFDSSSCRSVYVGNIHVNVTEKLLAEVFQSAGPLAGCKLIRKDKSSYGF 60
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATL 149
VDY DR SA+LAI+TL+GR ++GQ +KVNWAYAS QREDTSGHFN+FVGDLSPEVTDATL
Sbjct: 61 VDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 120
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ACFSVF +CSDARVMWD KTGRS+G+GFVSFRNQ+DAQSAINDL+GKWLGNRQIRCNWA
Sbjct: 121 YACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQIRCNWA 180
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
KGA ++KQ +++++ V LTNG SDG QE +NE+APENNP YTTVYVGNLS EVT +
Sbjct: 181 TKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHEVTQAE 240
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
LH FHAL G IE+VR+QRDKGFGFVRY TH EAALAIQM N RI+ GK +KCSWGSKP
Sbjct: 241 LHCQFHALGAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSKP 300
Query: 329 TPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQIALSKIAGA----QALMHPQ 376
TP GT+S PLPPP P+ LP G+S +L AY+RQ+ALS+ A + QALM
Sbjct: 301 TPLGTASNPLPPPAQPYQILPTAGINQGYSPAELLAYQRQLALSQAAASSLSGQALMQMT 360
Query: 377 AQHALKLG-MG-AAGASQAIYDSSGFQNVATTQQLMYY 412
H L G MG ++G +QA+YD G+ N ++ QQLMYY
Sbjct: 361 GHHGLAAGSMGVSSGGTQAMYD--GYPNNSSGQQLMYY 396
>gi|356515545|ref|XP_003526460.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
Length = 435
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/411 (66%), Positives = 326/411 (79%), Gaps = 20/411 (4%)
Query: 20 YHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGC 77
YHP +LAA Q+EP+ SGNLPP FD S CRSVYVGNIH VT+ LL EVF S GPL GC
Sbjct: 26 YHPGMLAAAMSQMEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85
Query: 78 KLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
KLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDT+GHFN+FV
Sbjct: 86 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
GDLSPEVTDATLFACFSV+P+CSDARVMWD KTGRS+G+GFVSFR+ +DAQSAIND+ GK
Sbjct: 146 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205
Query: 198 WLGNRQIRCNWAAKGA-TSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTV 255
WLGNRQIRCNWA KGA S +E++++DS++ V LTNG SD GQ+ +NEDAPENNP YTTV
Sbjct: 206 WLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTV 265
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL +VT +LH FHAL G IE+VRVQRDKGFGF+RY+TH EAALAIQM N R++
Sbjct: 266 YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLV 325
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQIALSKIA 367
GK +KCSWGSKPTPPGT+S PLPPP P+ LP G+S +L AY+RQ+ALS+ A
Sbjct: 326 RGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAA 385
Query: 368 ----GAQALMHPQAQHALK-LGMGA-AGASQAIYDSSGFQNVATTQQLMYY 412
QAL+ QH L MG +GASQA+YD G+ ++ QQLMYY
Sbjct: 386 VSGLSGQALLQMTGQHGLAPASMGINSGASQAMYD--GYTGNSSRQQLMYY 434
>gi|255647186|gb|ACU24061.1| unknown [Glycine max]
Length = 435
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 274/411 (66%), Positives = 324/411 (78%), Gaps = 20/411 (4%)
Query: 20 YHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGC 77
YHP +LAA Q+EP+ SGNLPP FD S CRSVYVGNIH VT+ LL EVF S GPL GC
Sbjct: 26 YHPGMLAAAMSQVEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 85
Query: 78 KLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
KLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDT+GHFN+FV
Sbjct: 86 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTTGHFNIFV 145
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
GDLSPEVTDATLFACFSV+P+CSDARVMWD KTGRS+G+GFVSFR+ +DAQSAIND+ GK
Sbjct: 146 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 205
Query: 198 WLGNRQIRCNWAAKGA-TSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTV 255
WLGNRQIRCNWA KGA S +E++++DS++ V LTNG SD GQ+ +NEDAPENNP YTTV
Sbjct: 206 WLGNRQIRCNWATKGAGGSSNEEKNNDSQNAVMLTNGSSDGGQDNNNEDAPENNPSYTTV 265
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL +VT +LH FHAL G IE+VRVQRDKGFGF+RY+TH EAALAIQM N R++
Sbjct: 266 YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFIRYNTHDEAALAIQMANGRLV 325
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQIALSKIA 367
GK +KCSWGSKPTPPGT+S PLPPP P+ LP G+S +L AY+RQ+ALS+ A
Sbjct: 326 RGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAA 385
Query: 368 ----GAQALMHPQAQHALK-LGMGAA-GASQAIYDSSGFQNVATTQQLMYY 412
QA + QH L MG GASQA+YD G+ ++ QQLMYY
Sbjct: 386 VSGLSGQAFLQMTGQHGLAPASMGINFGASQAMYD--GYTGNSSRQQLMYY 434
>gi|255642249|gb|ACU21389.1| unknown [Glycine max]
Length = 452
Score = 552 bits (1423), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/411 (66%), Positives = 324/411 (78%), Gaps = 20/411 (4%)
Query: 20 YHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGC 77
YHP +LAA Q+EP+ SGN+PP FD S CRSVYVGNIH VT+ LL EVF S GPL GC
Sbjct: 25 YHPGMLAAAMSQMEPVPSGNVPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGC 84
Query: 78 KLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
KLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDTSGHFN+FV
Sbjct: 85 KLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNIFV 144
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
GDLSPEVTDATLFACFSV+P+CSDARVMWD KTGRS+G+GFVSFR+ +DAQSAIND+ GK
Sbjct: 145 GDLSPEVTDATLFACFSVYPSCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTGK 204
Query: 198 WLGNRQIRCNWAAKGA-TSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTV 255
WLGNRQIRCNWA KGA S +E++ +DS++ V LTNG SD GQ+ +NEDAP+NNP YTTV
Sbjct: 205 WLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNNNEDAPDNNPSYTTV 264
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL +VT +LH FHAL G IE+VRVQRDKGFGFVRY+TH EAALAIQM N R++
Sbjct: 265 YVGNLPHDVTQAELHCQFHALGAGVIEEVRVQRDKGFGFVRYNTHDEAALAIQMANGRLV 324
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------GFSATDLAAYERQIALSKIA 367
GK +KCSWGSKPTPPGT+S PLPPP P+ LP G+S +L AY+RQ+ALS+ A
Sbjct: 325 RGKNMKCSWGSKPTPPGTASNPLPPPAQPYQILPTAGMNQGYSPAELLAYQRQLALSQAA 384
Query: 368 ----GAQALMHPQAQHALK-LGMGA-AGASQAIYDSSGFQNVATTQQLMYY 412
Q L+ QH L MG +GASQA+YD G+ ++ QQLMYY
Sbjct: 385 VSGLSGQTLLQMTGQHGLAPASMGVNSGASQAMYD--GYTGNSSRQQLMYY 433
>gi|413920410|gb|AFW60342.1| nucleolysin TIAR [Zea mays]
Length = 447
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/408 (70%), Positives = 329/408 (80%), Gaps = 24/408 (5%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
HP LLAAPQIEPI+SGNLPP FD+STCRSVYVGNIH QVT+ +LQEVF S GP+EGCKLI
Sbjct: 48 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLI 107
Query: 81 KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDL 140
+K+KSS+GF+DY+DRR AALAI++LNGR ++GQPIKVNWAY S+ REDTSGHFN+FVGDL
Sbjct: 108 RKEKSSFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDL 167
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEVTDATLFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDLNGKWLG
Sbjct: 168 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 227
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGN 259
NRQIRCNWA KGA +G+EKQ D+K V+L+NG S+ G+E NED PENNPQ+TTVYVGN
Sbjct: 228 NRQIRCNWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNEDGPENNPQFTTVYVGN 285
Query: 260 LSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKP 319
L E T D+H FH+L G+IE+VRV RDKGFGFVRYSTH EAALAIQMGN +++ G+
Sbjct: 286 LPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQ 345
Query: 320 IKCSWGSKPTPPGTSSTPLPPPPAPHLP-GFSATDLAAYERQIALSKIAGAQ-ALMHPQA 377
IKCSWGSKPTP GT+S PLPPP G SATDL AY+R +ALSK+A ALM
Sbjct: 346 IKCSWGSKPTPQGTASLPLPPPALAPFSTGVSATDLLAYQR-LALSKMASNHPALM---G 401
Query: 378 QHALK----LGMGAAGASQAIYDSSGFQNVATT---------QQLMYY 412
QH+LK LG+G GASQ+IYD GFQ + T QQLMYY
Sbjct: 402 QHSLKQVAALGIG-GGASQSIYD-GGFQGINTVTGTTSAQQQQQLMYY 447
>gi|218200015|gb|EEC82442.1| hypothetical protein OsI_26865 [Oryza sativa Indica Group]
Length = 427
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/387 (73%), Positives = 327/387 (84%), Gaps = 8/387 (2%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
QIEPIL+GNLPP FD STCRSVYVGN+H QVT ALL+EVF STG +EGCKLI+K+KSSYG
Sbjct: 46 QIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYG 105
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TLNG+ IFGQ I+VNWAYAS QREDT+ HFN+FVGDLSPEVTD+
Sbjct: 106 FVDYYDRRSAALAILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSA 165
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
LFA FS + +CSDARVMWDQKTGRSRG+GFVSFRNQ+DAQSAINDLNG+WLG+RQIRCNW
Sbjct: 166 LFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNW 225
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A KGA++G E+Q+SDSK+V +LTN ++ DG+EK+NED PENNPQY TVYVGNL+ EVT
Sbjct: 226 ATKGASNG-EQQTSDSKNVADLTNNLTEDGKEKANEDVPENNPQYRTVYVGNLAHEVTQD 284
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
LHR FHAL G IE+VR+Q KGFGFVRYS+H EAALAIQMGN RIL GKPIKCSWG+K
Sbjct: 285 VLHRLFHALGAGAIEEVRIQLGKGFGFVRYSSHTEAALAIQMGNGRILGGKPIKCSWGNK 344
Query: 328 PTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLGMG- 386
PTPPGT+S PLPPP AP + +A DL Y+R +ALSK+ +QALM QAQ LK MG
Sbjct: 345 PTPPGTTSAPLPPPAAPSV---TAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQAMGM 401
Query: 387 AAGASQAIYDSSGFQNVA-TTQQLMYY 412
AG SQA+YD+S F NV + QQLMYY
Sbjct: 402 GAGVSQAMYDAS-FPNVGPSQQQLMYY 427
>gi|115473341|ref|NP_001060269.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|23237933|dbj|BAC16506.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113611805|dbj|BAF22183.1| Os07g0615400 [Oryza sativa Japonica Group]
gi|215737207|dbj|BAG96136.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767365|dbj|BAG99593.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637457|gb|EEE67589.1| hypothetical protein OsJ_25126 [Oryza sativa Japonica Group]
Length = 427
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 283/387 (73%), Positives = 327/387 (84%), Gaps = 8/387 (2%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
QIEPIL+GNLPP FD STCRSVYVGN+H QVT ALL+EVF STG +EGCKLI+K+KSSYG
Sbjct: 46 QIEPILTGNLPPGFDTSTCRSVYVGNVHVQVTEALLREVFQSTGLVEGCKLIRKEKSSYG 105
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAAL+I+TLNG+ IFGQ I+VNWAYAS QREDT+ HFN+FVGDLSPEVTD+
Sbjct: 106 FVDYYDRRSAALSILTLNGKQIFGQLIRVNWAYASGQREDTTDHFNIFVGDLSPEVTDSA 165
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
LFA FS + +CSDARVMWDQKTGRSRG+GFVSFRNQ+DAQSAINDLNG+WLG+RQIRCNW
Sbjct: 166 LFAFFSGYSSCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNGQWLGSRQIRCNW 225
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A KGA++G E+Q+SDSK+V +LTN ++ DG+EK+NEDAPENNPQY TVYVGNL+ EVT
Sbjct: 226 ATKGASNG-EQQTSDSKNVADLTNNLTEDGKEKANEDAPENNPQYRTVYVGNLAHEVTQD 284
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
LHR FHAL G IE+VR+Q KGFGFVRYS H EAALAIQMGN RIL GKPIKCSWG+K
Sbjct: 285 VLHRLFHALGAGAIEEVRIQLGKGFGFVRYSNHAEAALAIQMGNGRILGGKPIKCSWGNK 344
Query: 328 PTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLGMG- 386
PTPPGT+S PLPPP AP + +A DL Y+R +ALSK+ +QALM QAQ LK MG
Sbjct: 345 PTPPGTTSAPLPPPAAPSV---TAADLLEYQRSLALSKMVSSQALMQAQAQQHLKQAMGM 401
Query: 387 AAGASQAIYDSSGFQNVA-TTQQLMYY 412
AG SQA+YD+S F NV + QQLMYY
Sbjct: 402 GAGVSQAMYDAS-FPNVGPSQQQLMYY 427
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/414 (66%), Positives = 325/414 (78%), Gaps = 24/414 (5%)
Query: 20 YHPSLLAAP---QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG 76
+HP +LAA Q+EP+ SGNLPP FDAS CRSVYVGNIH VT+ LL EVF S GPL G
Sbjct: 3 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 62
Query: 77 CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
CKLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDTSGHFNVF
Sbjct: 63 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVF 122
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VGDLSPEVTDATLFACFSV+ TCSDARVMWD KTGRS+G+GFVSFR+ +DAQSAIND+ G
Sbjct: 123 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTG 182
Query: 197 KWLGNRQIRCNWAAKGA-TSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTT 254
KWLGNRQIRCNWA KGA S +E++ +DS++ V LTNG SD GQ+ SNEDAPENNP YTT
Sbjct: 183 KWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTT 242
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
VYVGNL +VT +LH FHAL G +E+VRVQ KGFGFVRY+TH EAA+AIQM N R
Sbjct: 243 VYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRP 302
Query: 315 LCGKPIKCSWGSKPTPPGTSSTPLPPPPA-PH--LP------GFSATDLAAYERQIALSK 365
+ GK +KCSWGSKPTPPGT+S PLPPP A P+ LP G++A +L AY+RQ+ALS+
Sbjct: 303 VRGKTMKCSWGSKPTPPGTASNPLPPPAAQPYQILPTAGMNQGYTAAELLAYQRQLALSQ 362
Query: 366 IA----GAQALMHPQAQHAL---KLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
A QAL+ QH L +G+ +A ASQA+YD G+ ++ QQLMYY
Sbjct: 363 AAVSGLSGQALLQMSGQHGLAPASMGINSA-ASQAMYD--GYAGNSSRQQLMYY 413
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 275/414 (66%), Positives = 325/414 (78%), Gaps = 24/414 (5%)
Query: 20 YHPSLLAAP---QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG 76
+HP +LAA Q+EP+ SGNLPP FDAS CRSVYVGNIH VT+ LL EVF S GPL G
Sbjct: 29 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 88
Query: 77 CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
CKLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDTSGHFNVF
Sbjct: 89 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNVF 148
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VGDLSPEVTDATLFACFSV+ TCSDARVMWD KTGRS+G+GFVSFR+ +DAQSAIND+ G
Sbjct: 149 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMTG 208
Query: 197 KWLGNRQIRCNWAAKGA-TSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTT 254
KWLGNRQIRCNWA KGA S +E++ +DS++ V LTNG SD GQ+ SNEDAPENNP YTT
Sbjct: 209 KWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYTT 268
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
VYVGNL +VT +LH FHAL G +E+VRVQ KGFGFVRY+TH EAA+AIQM N R
Sbjct: 269 VYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGRP 328
Query: 315 LCGKPIKCSWGSKPTPPGTSSTPLPPPPA-PH--LP------GFSATDLAAYERQIALSK 365
+ GK +KCSWGSKPTPPGT+S PLPPP A P+ LP G++A +L AY+RQ+ALS+
Sbjct: 329 VRGKTMKCSWGSKPTPPGTASNPLPPPAAQPYQILPTAGMNQGYTAAELLAYQRQLALSQ 388
Query: 366 IA----GAQALMHPQAQHAL---KLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
A QAL+ QH L +G+ +A ASQA+YD G+ ++ QQLMYY
Sbjct: 389 AAVSGLSGQALLQMSGQHGLAPASMGINSA-ASQAMYD--GYAGNSSRQQLMYY 439
>gi|357121988|ref|XP_003562698.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 427
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/410 (69%), Positives = 332/410 (80%), Gaps = 12/410 (2%)
Query: 10 TMMQQQSLYQYHPSLLAAP---QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQE 66
+M +L Q+H LL AP QIEPIL+GNLPP FDASTCRSVYVGNIH VT A+L+E
Sbjct: 23 SMYPMPTLPQHH--LLGAPPPQQIEPILTGNLPPGFDASTCRSVYVGNIHVHVTEAVLRE 80
Query: 67 VFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR 126
VF STG +EGCKLI+K+KSSYGFVDY++R SAALAI+ LNGR IFGQPI+VNWAYAS QR
Sbjct: 81 VFQSTGSVEGCKLIRKEKSSYGFVDYYERGSAALAILQLNGRQIFGQPIRVNWAYASGQR 140
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVF-PTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
EDT+ HFN+FVGDLS EVTD+ LFA FS + +CSDARVMWDQKTGRSRG+GFVSFRNQ+
Sbjct: 141 EDTTDHFNIFVGDLSAEVTDSALFAFFSGYSSSCSDARVMWDQKTGRSRGYGFVSFRNQQ 200
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNED 244
DAQSAINDLNG+WLGNRQIRCNWA KGA S +++Q+SDSKS+ +TN + DG+EK+NED
Sbjct: 201 DAQSAINDLNGQWLGNRQIRCNWATKGANSVEDQQTSDSKSIAGVTNNFTEDGKEKANED 260
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
APENNP Y TVYVGNL+ E T LHR F+AL G IE+VRVQ KGFGFV+YS+H EAA
Sbjct: 261 APENNPLYRTVYVGNLAHEATQDVLHRFFYALGAGAIEEVRVQHGKGFGFVKYSSHAEAA 320
Query: 305 LAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALS 364
LAIQMGN IL GKPIKCSWG+KPTPPGT+STPL PPP+ HL F A DL AY+R IAL+
Sbjct: 321 LAIQMGNGCILGGKPIKCSWGNKPTPPGTTSTPLLPPPSAHL--FPAADLLAYQRAIALN 378
Query: 365 KIAGAQALMHPQAQHALKLGMGAA-GASQAIYDSSGFQNV-ATTQQLMYY 412
K+ QALM Q +GMG + A+QA+YDSS FQN+ A+ QQLMY+
Sbjct: 379 KMTSTQALMQAQHLKQAAMGMGMSPSANQAMYDSS-FQNIGASQQQLMYH 427
>gi|115486297|ref|NP_001068292.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|77551976|gb|ABA94773.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113645514|dbj|BAF28655.1| Os11g0620100 [Oryza sativa Japonica Group]
gi|215767783|dbj|BAH00012.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218186124|gb|EEC68551.1| hypothetical protein OsI_36864 [Oryza sativa Indica Group]
gi|222616351|gb|EEE52483.1| hypothetical protein OsJ_34666 [Oryza sativa Japonica Group]
Length = 441
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/381 (73%), Positives = 323/381 (84%), Gaps = 8/381 (2%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
AAPQIEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI+K+KS
Sbjct: 57 AAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS 116
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVT 145
S+GFVDY+DRRSAA+AIV+LNGR +FGQPIKVNWAYAS+QREDTSGHFN+FVGDL PEVT
Sbjct: 117 SFGFVDYYDRRSAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVT 176
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
DA LFA F+ F +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLGNRQ+R
Sbjct: 177 DAALFAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 236
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGNLSSEV 264
CNWA KGA +G+EKQ++DSK ++ELTNG S+ G++ +NED PENNPQYTTVYVGNL +V
Sbjct: 237 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDV 296
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
S D+HR FH+L VG+IE+VRV RDKGFGFVRYSTH EAALAIQ GN +++ G+ IKCSW
Sbjct: 297 NSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSW 356
Query: 325 GSKPTPPGT-SSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALK- 382
GSKPTPPGT S+ PP PAP PG SATDL AYER +ALSK+A ALM A ALK
Sbjct: 357 GSKPTPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--ALKQ 414
Query: 383 --LGMGAAGASQAIYDSSGFQ 401
AGASQAIYD G+Q
Sbjct: 415 AAAMGMGAGASQAIYD-GGYQ 434
>gi|326524289|dbj|BAK00528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 429
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 281/404 (69%), Positives = 327/404 (80%), Gaps = 16/404 (3%)
Query: 20 YHPSLLAAP--QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGC 77
+H L AAP QIEPIL+GNLPP FD STCRSVYVGNIH QVT ALL+EVF S G ++GC
Sbjct: 31 HHHLLGAAPPQQIEPILTGNLPPGFDTSTCRSVYVGNIHVQVTEALLREVFQSAGSVDGC 90
Query: 78 KLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
KLI+K+KSSYGFVDY++R SAALAI+TLNG+ IFGQPI+VNWAYAS QREDT+ HF++FV
Sbjct: 91 KLIRKEKSSYGFVDYYERGSAALAILTLNGKQIFGQPIRVNWAYASGQREDTTDHFHIFV 150
Query: 138 GDLSPEVTDATLFACFSVF-PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
GDLSPEVTD+ LFA FS + P CSDARVMWDQKTGRSRG+GFVSFRNQ+DAQSAINDLNG
Sbjct: 151 GDLSPEVTDSALFAFFSAYSPNCSDARVMWDQKTGRSRGYGFVSFRNQQDAQSAINDLNG 210
Query: 197 KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTV 255
+WLGNRQIRCNWA KGA SG+++ +SDSKS+V++ N ++ ++KSNEDAPENNP Y TV
Sbjct: 211 QWLGNRQIRCNWATKGANSGEDQLASDSKSIVDVNNNFTENAKQKSNEDAPENNPLYRTV 270
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL+ EVT LHR FHAL G IE+VRVQ KGFGFV+YS H E ALAIQ GN RIL
Sbjct: 271 YVGNLAHEVTQDVLHRFFHALGAGAIEEVRVQHGKGFGFVKYSNHAETALAIQTGNGRIL 330
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHP 375
GKP+KCSWG+KPTPPGT+S PLPPP AP P +A +L AY+R IA+SK+A QALM
Sbjct: 331 GGKPVKCSWGNKPTPPGTTSAPLPPPAAPSHP--AAANLVAYQRAIAMSKMASTQALM-- 386
Query: 376 QAQHALKLGMG-AAGASQAIYDSSGFQNVATT------QQLMYY 412
QAQH + MG GASQA+YD + FQNV + QQLMYY
Sbjct: 387 QAQHLRQAAMGMGVGASQAMYDGT-FQNVGASQQQQQQQQLMYY 429
>gi|108864589|gb|ABG22554.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 403
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/377 (73%), Positives = 319/377 (84%), Gaps = 8/377 (2%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF 89
IEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI+K+KSS+GF
Sbjct: 23 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGF 82
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATL 149
VDY+DRRSAA+AIV+LNGR +FGQPIKVNWAYAS+QREDTSGHFN+FVGDL PEVTDA L
Sbjct: 83 VDYYDRRSAAIAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDLCPEVTDAAL 142
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
FA F+ F +CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLGNRQ+RCNWA
Sbjct: 143 FAFFAGFTSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWA 202
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
KGA +G+EKQ++DSK ++ELTNG S+ G++ +NED PENNPQYTTVYVGNL +V S D
Sbjct: 203 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 262
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+HR FH+L VG+IE+VRV RDKGFGFVRYSTH EAALAIQ GN +++ G+ IKCSWGSKP
Sbjct: 263 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKP 322
Query: 329 TPPGT-SSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALK---LG 384
TPPGT S+ PP PAP PG SATDL AYER +ALSK+A ALM A ALK
Sbjct: 323 TPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--ALKQAAAM 380
Query: 385 MGAAGASQAIYDSSGFQ 401
AGASQAIYD G+Q
Sbjct: 381 GMGAGASQAIYD-GGYQ 396
>gi|242082185|ref|XP_002445861.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
gi|241942211|gb|EES15356.1| hypothetical protein SORBIDRAFT_07g027050 [Sorghum bicolor]
Length = 447
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/399 (63%), Positives = 310/399 (77%), Gaps = 19/399 (4%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 52 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 111
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI+GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 112 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 171
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 172 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 231
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K + +EK +D+ + V LTNG S Q+ +++ PENNP TTVYVGNL
Sbjct: 232 ATK--NNSEEKPETDNHNAVVLTNGSSSNSATDASQDGGSKENPENNPDCTTVYVGNLGH 289
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF++L VG IE++RVQ+DKGFGFVRYSTH EAALAIQMGN ++ GKPIKC
Sbjct: 290 EVNRDELHRHFYSLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMGNGLVVRGKPIKC 349
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP---------GFSATDLAAYERQIALSKIAGAQALM 373
SWG+KPTPPGTSS PLPPP AP+ P GF+A +L AY+RQ+ALS+ A Q
Sbjct: 350 SWGNKPTPPGTSSKPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQAAAGQIAG 409
Query: 374 HPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AA SQA+YD G+ N ++ QQLMYY
Sbjct: 410 QHGLAGQVSAGLLAAAGSQALYD--GYPNQSSAQQLMYY 446
>gi|326534302|dbj|BAJ89501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 447
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 252/398 (63%), Positives = 310/398 (77%), Gaps = 19/398 (4%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ +GNLPP FD STCRSVYVGN+HP VT LL EVF +GP+E CKLI+K+KSS+G
Sbjct: 54 QMEPVSNGNLPPGFDPSTCRSVYVGNVHPNVTENLLIEVFQGSGPVERCKLIRKEKSSFG 113
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI+GQ IKVNWA+AS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAFASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 174 LYACFSTYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISD------GQEKSNEDAPENNPQYTTVYVGNLSS 262
A K T+ +EKQ +D+ + V LTNG S Q+ +++ PENNP +TTVYVGNL
Sbjct: 234 ATK--TNAEEKQETDNHNAVVLTNGGSSNAAMEANQDTGSKENPENNPDFTTVYVGNLGH 291
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ++KGFGF+RYSTH EAALAIQM N ++ GKPIKC
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEVRVQQEKGFGFIRYSTHGEAALAIQMANGLVVRGKPIKC 351
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP--------GFSATDLAAYERQIALSKIAGAQALMH 374
SWG+KPTPPGTSS PLPPP A + P GF+A +L AY+RQ+ALS+ A Q
Sbjct: 352 SWGNKPTPPGTSSKPLPPPIASYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAGQ 411
Query: 375 PQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AAG SQA+YD G+ N + QQLMYY
Sbjct: 412 HGLAGQVSAGLLAAG-SQALYD--GYPNQTSAQQLMYY 446
>gi|357148481|ref|XP_003574781.1| PREDICTED: nucleolysin TIAR-like [Brachypodium distachyon]
Length = 452
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 254/399 (63%), Positives = 312/399 (78%), Gaps = 20/399 (5%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ +GNLPP FD STCRSVYVGN+HP VT +LL EVF S+GP+E CKLI+K+KSS+G
Sbjct: 58 QMEPVSNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGPVERCKLIRKEKSSFG 117
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI++L+GRHI+GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 118 FVDYYDRRSAALAIMSLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 177
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFSV+ +CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 178 LYACFSVYTSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 237
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISD------GQEKSNEDAPENNPQYTTVYVGNLSS 262
A K T+ +EKQ +D+ + V LTNG S QE +++ PENNP +TTVYVGNL
Sbjct: 238 ATK--TNAEEKQETDNHNAVVLTNGSSSNAAMEGNQETGSKENPENNPDFTTVYVGNLGH 295
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ+DKGFGFVRY+TH EAALAIQM N ++ GKPIKC
Sbjct: 296 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYNTHGEAALAIQMANGLVIRGKPIKC 355
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP--------GFSATDLAAYERQIALSKIAGAQALMH 374
SWG+KPTPPGTSS PLPPP + P GF+A +L AY+RQ+ALS+ A Q
Sbjct: 356 SWGNKPTPPGTSSKPLPPPGPAYQPVAMAGVPQGFTAAELLAYQRQLALSQAAAGQIAAG 415
Query: 375 PQAQHA-LKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AAG SQA+YD G+ N ++ QQLMYY
Sbjct: 416 GHGLAGQVSAGLLAAG-SQALYD--GYPNQSSAQQLMYY 451
>gi|194701250|gb|ACF84709.1| unknown [Zea mays]
Length = 424
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/399 (62%), Positives = 307/399 (76%), Gaps = 19/399 (4%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 29 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 88
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI+GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 89 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 148
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 149 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 208
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K T+ +EK +D+ + V LTNG S Q+ +++ PENNP TTVYVGNL
Sbjct: 209 ATK--TNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGH 266
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE++RVQ+DKGFGFVRYSTH EAALAIQM N ++ GK IKC
Sbjct: 267 EVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKC 326
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP---------GFSATDLAAYERQIALSKIAGAQALM 373
SWG+KPTPPGT+S PLPPP A + P GF+A +L AY+RQ+ALS+ A Q
Sbjct: 327 SWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIAG 386
Query: 374 HPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AA SQA+YD G+ N ++ QQLMYY
Sbjct: 387 QHGLAGQVSAGLLAAAGSQALYD--GYPNQSSAQQLMYY 423
>gi|226505614|ref|NP_001148740.1| LOC100282356 [Zea mays]
gi|195621754|gb|ACG32707.1| mRNA 3-UTR binding protein [Zea mays]
gi|224030425|gb|ACN34288.1| unknown [Zea mays]
gi|413921566|gb|AFW61498.1| mRNA 3-UTR binding protein [Zea mays]
Length = 449
Score = 517 bits (1331), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/399 (62%), Positives = 307/399 (76%), Gaps = 19/399 (4%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 113
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI+GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K T+ +EK +D+ + V LTNG S Q+ +++ PENNP TTVYVGNL
Sbjct: 234 ATK--TNSEEKPETDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGH 291
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE++RVQ+DKGFGFVRYSTH EAALAIQM N ++ GK IKC
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKC 351
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP---------GFSATDLAAYERQIALSKIAGAQALM 373
SWG+KPTPPGT+S PLPPP A + P GF+A +L AY+RQ+ALS+ A Q
Sbjct: 352 SWGNKPTPPGTTSKPLPPPVASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIAG 411
Query: 374 HPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AA SQA+YD G+ N ++ QQLMYY
Sbjct: 412 QHGLAGQVSAGLLAAAGSQALYD--GYPNQSSAQQLMYY 448
>gi|115477340|ref|NP_001062266.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|42408523|dbj|BAD09702.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|42409171|dbj|BAD10437.1| putative oligouridylate binding protein [Oryza sativa Japonica
Group]
gi|113624235|dbj|BAF24180.1| Os08g0520300 [Oryza sativa Japonica Group]
gi|215697677|dbj|BAG91671.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640879|gb|EEE69011.1| hypothetical protein OsJ_27962 [Oryza sativa Japonica Group]
Length = 447
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 250/398 (62%), Positives = 304/398 (76%), Gaps = 19/398 (4%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN+HP VT +LL EVF S+G +E CKLI+K+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 174 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 233
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K + +EKQ +D+ + V LTNG S Q+ +++ PENNP TTVYVGNL
Sbjct: 234 ATK--NNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGH 291
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ+DKGFGFVRYS H EAALAIQM N ++ GKPIKC
Sbjct: 292 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKC 351
Query: 323 SWGSKPTPPGTSS-------TPLPPPPAPHLP-GFSATDLAAYERQIALSKIAGAQALMH 374
SWG+KPTPPGTSS P P +P GFSA D+ AY+RQ+ LS++A Q
Sbjct: 352 SWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIAGQ 411
Query: 375 PQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AAG SQA+YD G+ N ++ QQLMYY
Sbjct: 412 HGLAGQVSAGLLAAG-SQALYD--GYPNQSSAQQLMYY 446
>gi|226500040|ref|NP_001150056.1| LOC100283683 [Zea mays]
gi|195636346|gb|ACG37641.1| nucleolysin TIAR [Zea mays]
Length = 421
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 239/314 (76%), Positives = 274/314 (87%), Gaps = 3/314 (0%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
HP LLAAPQIEPI+SGNLPP FD+STCRSVYVGNIH QVT+ +LQEVF S GP+EGCKLI
Sbjct: 48 HPGLLAAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLI 107
Query: 81 KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDL 140
+K+KSS+GF+DY+DRR AALAI++LNGR ++GQPIKVNWAY S+ REDTSGHFN+FVGDL
Sbjct: 108 RKEKSSFGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDL 167
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEVTDATLFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDLNGKWLG
Sbjct: 168 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 227
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGN 259
NRQIRCNWA KGA +G+EKQ D+K V+L+NG S+ G+E N+D PENNPQ+TTVYVGN
Sbjct: 228 NRQIRCNWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNDDGPENNPQFTTVYVGN 285
Query: 260 LSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKP 319
L E T D+H FH+L G+IE+VRV RDKGFGFVRYSTH EAALAIQMGN +++ G+
Sbjct: 286 LPHEATMNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQ 345
Query: 320 IKCSWGSKPTPPGT 333
IKCSWGSKPTP GT
Sbjct: 346 IKCSWGSKPTPQGT 359
>gi|226528727|ref|NP_001148487.1| mRNA 3-UTR binding protein [Zea mays]
gi|195619730|gb|ACG31695.1| mRNA 3-UTR binding protein [Zea mays]
Length = 447
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/405 (61%), Positives = 306/405 (75%), Gaps = 32/405 (7%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 53 QMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 112
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRH++GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 113 FVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 172
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 173 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAIAEMTGKWLGSRQIRCNW 232
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K + +EK +D+ + V LTNG S+ Q+ +++ P+NNP TTVYVGNL
Sbjct: 233 ATK--NNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGH 290
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ+DKGFGFVRYSTH EAALAIQM N ++ GKPIKC
Sbjct: 291 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKC 350
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP---------GFSATDLAAYERQIALSKIAGAQALM 373
SWG KPTPPGT S PLPPP A + P GF+ +L AY+RQ+ALS+ A Q
Sbjct: 351 SWGVKPTPPGTGSKPLPPPAATYQPAVAMQGVPQGFTTAELLAYQRQLALSQAAAGQ--- 407
Query: 374 HPQAQHALKLGM------GAAGASQAIYDSSGFQNVATTQQLMYY 412
QHA G AA SQA+YD G+ N ++ QQLMYY
Sbjct: 408 ----QHAGLAGQVSAAGLLAAAGSQALYD--GYPNQSSAQQLMYY 446
>gi|223948725|gb|ACN28446.1| unknown [Zea mays]
gi|414869520|tpg|DAA48077.1| TPA: mRNA 3-UTR binding protein [Zea mays]
Length = 446
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 250/405 (61%), Positives = 306/405 (75%), Gaps = 32/405 (7%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 52 QMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 111
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRH++GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 112 FVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 171
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ACFS +P+CSDARVMWD KTGRSRG+GFVSFRNQ++A++AI ++ GKWLG+RQIRCNW
Sbjct: 172 LYACFSAYPSCSDARVMWDNKTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNW 231
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K + +EK +D+ + V LTNG S+ Q+ +++ P+NNP TTVYVGNL
Sbjct: 232 ATK--NNSEEKPETDNHNAVVLTNGSSNNSATDASQDAGSKEPPQNNPDCTTVYVGNLGH 289
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ+DKGFGFVRYSTH EAALAIQM N ++ GKPIKC
Sbjct: 290 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSTHGEAALAIQMSNGSVVRGKPIKC 349
Query: 323 SWGSKPTPPGTSSTPLPPPPAPHLP---------GFSATDLAAYERQIALSKIAGAQALM 373
SWG KPTPPGT S PLPPP A + P GF+ +L AY+RQ+ALS+ A Q
Sbjct: 350 SWGVKPTPPGTGSKPLPPPAATYQPAVAMPGVPQGFTTAELLAYQRQLALSQAAAGQ--- 406
Query: 374 HPQAQHALKLGM------GAAGASQAIYDSSGFQNVATTQQLMYY 412
QHA G AA SQA+YD G+ N ++ QQLMYY
Sbjct: 407 ----QHAGLAGQVSAAGLLAAAGSQALYD--GYPNQSSAQQLMYY 445
>gi|148909819|gb|ABR17996.1| unknown [Picea sitchensis]
Length = 490
Score = 495 bits (1275), Expect = e-137, Method: Compositional matrix adjust.
Identities = 256/443 (57%), Positives = 303/443 (68%), Gaps = 53/443 (11%)
Query: 20 YHPSLLA-APQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCK 78
YH LLA QIEPI SGNLPP FD+S CRSVYVGNI VT LL EVF + GPLEGCK
Sbjct: 50 YHAGLLAPLSQIEPIPSGNLPPGFDSSACRSVYVGNISVHVTEGLLAEVFGAVGPLEGCK 109
Query: 79 LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
LIKK+KSSYGFVDY+D RSAA +I+ LNG+ I+GQ IKVNWAYAS QREDT+GH+++FVG
Sbjct: 110 LIKKEKSSYGFVDYYDHRSAANSILHLNGKQIYGQAIKVNWAYASGQREDTTGHYSIFVG 169
Query: 139 DLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKW 198
DLSPEVTDA LFACFS++P+CSDARVMWDQK+GRSRGFGFVSFRNQ+DA +AIN + GK
Sbjct: 170 DLSPEVTDAALFACFSIYPSCSDARVMWDQKSGRSRGFGFVSFRNQQDADNAINQMTGKT 229
Query: 199 LGNRQIRCNWAAKGATSG--DEKQSSDSKSVVELTNGIS------------------DGQ 238
LG+R IRCNWA K ++ D+KQ+S+ + +N S GQ
Sbjct: 230 LGSRPIRCNWATKSSSGNQSDDKQTSEMQFASNASNNTSANGSADHNISAGTTAVGTGGQ 289
Query: 239 EK--SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
+K + PENNP YTTVY+GNL EVT +LHR F AL VG IEDVRVQRDKGFGFVR
Sbjct: 290 QKGGAQTSGPENNPSYTTVYIGNLPHEVTQTELHRQFLALGVGVIEDVRVQRDKGFGFVR 349
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHL---------P 347
Y +H EAALAIQ+ N R++CGK IKCSWGSKPTPPG SS LPPP AP
Sbjct: 350 YRSHEEAALAIQLANGRVICGKSIKCSWGSKPTPPGASSNALPPPSAPFQGVVAPQGLNQ 409
Query: 348 GFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLG-----MGAAGASQAIYDSSGFQN 402
G++A D+ AY RQ+ +S+ Q L+ AQ + LG MG G +Q +YD+ FQ
Sbjct: 410 GYTAADILAY-RQLNMSQAGAGQPLLPLSAQQGMGLGLGHGPMGVVGPNQNVYDN--FQA 466
Query: 403 VATT-------------QQLMYY 412
A QQ+MYY
Sbjct: 467 GAGLPAAAAAAAAAAMRQQIMYY 489
>gi|168027692|ref|XP_001766363.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682272|gb|EDQ68691.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 397
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/392 (61%), Positives = 293/392 (74%), Gaps = 21/392 (5%)
Query: 3 QHRLKQQTMMQ---------QQSLYQYHPSLLAA-PQIEPILSGNLPPRFDASTCRSVYV 52
Q RLK Q+++Q Q YHP LLA PQ+EP+ SGNLPP FDA++CRSVYV
Sbjct: 1 QQRLKHQSLVQVMLQQNQHQPQQQALYHPGLLATIPQMEPLPSGNLPPGFDATSCRSVYV 60
Query: 53 GNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFG 112
GNIH +VT ALL EVFS+ GPLEGCKLI+K+KSSYGFVDY D AA+A+ TLNGR IFG
Sbjct: 61 GNIHTKVTEALLAEVFSNIGPLEGCKLIRKEKSSYGFVDYLDHIYAAVALTTLNGRLIFG 120
Query: 113 QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR 172
QPIKVNWAYAS QREDT+GH+NVFVGDLSPEVTDATLFA F V+P+CSDARVMWDQ++GR
Sbjct: 121 QPIKVNWAYASGQREDTTGHYNVFVGDLSPEVTDATLFAAFCVYPSCSDARVMWDQRSGR 180
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
SRGFGFVSFR+Q++A++AI+++ GKWLG R IRCNWA K +S ++++ V + +
Sbjct: 181 SRGFGFVSFRSQQEAENAISEMTGKWLGTRSIRCNWATKTNSSASADETNNGGHAVGMND 240
Query: 233 GIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG 291
S D E S D PENNPQYTTVYVGNL+ EV +LHR FH + G IEDVRVQ+DKG
Sbjct: 241 SKSEDRPEGSAGDGPENNPQYTTVYVGNLAHEVNQGELHRWFHCMGAGVIEDVRVQKDKG 300
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST------PLPPPPAPH 345
FGFVRY TH EAALAIQ N R+LCGK +KCSWGSKPT PG+SS P+ P A
Sbjct: 301 FGFVRYRTHEEAALAIQAANGRVLCGKSVKCSWGSKPTVPGSSSAPLPPPLPVNPYQAGL 360
Query: 346 LP----GFSATDLAAYERQIALSKIAGAQALM 373
+ G+SA DL AY+RQ++++ +AL+
Sbjct: 361 MSGVNLGYSAADLLAYQRQLSMTPQGAGRALL 392
>gi|22208507|gb|AAM94322.1| putative oligouridylate binding protein [Sorghum bicolor]
Length = 581
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 227/304 (74%), Positives = 263/304 (86%), Gaps = 3/304 (0%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
HP LLAAPQ+EPI+SGNLPP FD+STCRSVYVGNI QVT+ +LQEVF S GP+EGCKLI
Sbjct: 40 HPGLLAAPQMEPIVSGNLPPGFDSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLI 99
Query: 81 KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDL 140
+K+KSS+GF+DY+DRR AALAI++LNGR ++GQPIKVNWAY S+QREDTSGHFN+FVGDL
Sbjct: 100 RKEKSSFGFIDYYDRRYAALAILSLNGRPLYGQPIKVNWAYTSTQREDTSGHFNIFVGDL 159
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEVTDATLFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDLNGKWLG
Sbjct: 160 CPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLG 219
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGN 259
NRQIRCNWA KGA +G+EKQ DSK V+LTNG S+ G+E NED PE+NPQ+TTVYVGN
Sbjct: 220 NRQIRCNWATKGANAGEEKQIVDSK--VDLTNGTSESGKENPNEDGPESNPQFTTVYVGN 277
Query: 260 LSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKP 319
L E T+ D+H FH+L G+IE+VRV RDKGFGFVRYSTH EAA AIQM N +++ G+
Sbjct: 278 LPHEATNNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAAQAIQMANGQLIGGRQ 337
Query: 320 IKCS 323
IK +
Sbjct: 338 IKTT 341
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++S +VTD L F +++ +K+ FGF+ + ++ A
Sbjct: 62 DSSTCRSVYVGNISLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYA 117
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA E
Sbjct: 118 ALAILSLNGRPLYGQPIKVNWAYTSTQR-------------------------------E 146
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHP 301
+ + ++VG+L EVT L F T D RV R +GFGFV +
Sbjct: 147 DTSGHFNIFVGDLCPEVTDATLFAFFSGY--STCSDARVMWDQKTGRSRGFGFVSFRNQQ 204
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
+A AI N + L + I+C+W +K G
Sbjct: 205 DAQSAINDLNGKWLGNRQIRCNWATKGANAG 235
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 312 ARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLP-GFSATDLAAYERQIALSKIAGAQ 370
AR+ CSWGSKPTPPGT+S+PLPPP G S TD AY+R +AL+K+A
Sbjct: 470 ARVCTENLGMCSWGSKPTPPGTASSPLPPPAPALFSTGVSPTDFLAYQR-MALNKMATNP 528
Query: 371 ALMHPQAQHALKLGMGAAGASQAIYDSSGFQNV 403
+LM A + + LGMG ASQ+IYD GFQ +
Sbjct: 529 SLMGQHALNQVALGMGGR-ASQSIYD-GGFQGI 559
>gi|23928438|gb|AAN40024.1| putative oligouridylate binding protein [Zea mays]
Length = 639
Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/311 (72%), Positives = 262/311 (84%), Gaps = 3/311 (0%)
Query: 27 APQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS 86
P+IEPI+SGNLPP FD+STCRSVYVGNIH QVT+ +LQEVF S GP+EGCKLI+K+KSS
Sbjct: 98 CPKIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS 157
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTD 146
+GF+DY+DRR AALAI++LNGR ++GQPIKVNWAY S+ REDTSGHFN+FVGDL PEVTD
Sbjct: 158 FGFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTD 217
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
ATLFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDLNGKWLGNRQIRC
Sbjct: 218 ATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRC 277
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA KGA +G+EKQ D+K V+L+NG S+ G+E N+D PENNPQ+TTVYVGNL E T
Sbjct: 278 NWATKGANAGEEKQILDTK--VDLSNGSSESGKENPNDDGPENNPQFTTVYVGNLPHEAT 335
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
D+H FH+L G+IE+VRV RDKGFGFVRYSTH EAALAIQMGN +++ G+ IK S
Sbjct: 336 MNDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSSKH 395
Query: 326 SKPTPPGTSST 336
P S+T
Sbjct: 396 ELQILPTLSAT 406
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 198/459 (43%), Gaps = 101/459 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDR 95
PR D S +++VG++ P+VT+A L FS +++ K+ +GFV + ++
Sbjct: 196 PREDTSGHFNIFVGDLCPEVTDATLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQ 255
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASS------QREDT----------SGHFN----- 134
+ A AI LNG+ + + I+ NWA + Q DT SG N
Sbjct: 256 QDAQSAINDLNGKWLGNRQIRCNWATKGANAGEEKQILDTKVDLSNGSSESGKENPNDDG 315
Query: 135 ---------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
V+VG+L E T + F S V + R +GFGFV + E
Sbjct: 316 PENNPQFTTVYVGNLPHEATMNDVHLFFHSLGAGSIEEV----RVTRDKGFGFVRYSTHE 371
Query: 186 DAQSAINDLNGKWLGNRQIR------------------CNW-------------AAKGAT 214
+A AI NG+ +G RQI+ C W A
Sbjct: 372 EAALAIQMGNGQLIGGRQIKSSKHELQILPTLSATFRSCTWTSTHLNHRLRDYDGAYELR 431
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNE--DAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
+ +E + S VE +D + + DA T +YV + + ++ R
Sbjct: 432 TAEESDRCEGSSSVEFLLEGNDAVRQGGDLYDAGTTCMPCTHIYVIPIKCFLQTLSAVRV 491
Query: 273 FHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ ++D + D+G + P ++ + +++ GK +CSWGSK
Sbjct: 492 LGFI----MKDESLLPDEGRCCDTCEVIIRQGEPCSSGVAESSEDKVV-GKVARCSWGSK 546
Query: 328 PTPPGTSSTPLPPPPAPHLP-GFSATDLAAYERQIALSKIAGAQALMHPQAQHALK---- 382
PTP GT+S PLPPP G SATDL AY+R + LSK+A ALM QHALK
Sbjct: 547 PTPQGTASLPLPPPALAPFSTGVSATDLLAYQR-LTLSKMASNPALM---GQHALKQVAA 602
Query: 383 LGMGAAGASQAIYDSSGFQNVATT---------QQLMYY 412
LG+G GASQ+IYD GFQ + T QQLMYY
Sbjct: 603 LGIG-GGASQSIYD-GGFQGINTATGTTSVQQQQQLMYY 639
>gi|413920411|gb|AFW60343.1| putative oligouridylate binding protein [Zea mays]
Length = 425
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 223/297 (75%), Positives = 258/297 (86%), Gaps = 3/297 (1%)
Query: 28 PQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY 87
P+IEPI+SGNLPP FD+STCRSVYVGNIH QVT+ +LQEVF S GP+EGCKLI+K+KSS+
Sbjct: 99 PKIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSSF 158
Query: 88 GFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDA 147
GF+DY+DRR AALAI++LNGR ++GQPIKVNWAY S+ REDTSGHFN+FVGDL PEVTDA
Sbjct: 159 GFIDYYDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREDTSGHFNIFVGDLCPEVTDA 218
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
TLFA FS + TCSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSAINDLNGKWLGNRQIRCN
Sbjct: 219 TLFAFFSGYSTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGNRQIRCN 278
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
WA KGA +G+EKQ D+K V+L+NG S+ G+E NED PENNPQ+TTVYVGNL E T
Sbjct: 279 WATKGANAGEEKQILDTK--VDLSNGSSESGKENPNEDGPENNPQFTTVYVGNLPHEATM 336
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
D+H FH+L G+IE+VRV RDKGFGFVRYSTH EAALAIQMGN +++ G+ IK S
Sbjct: 337 NDVHLFFHSLGAGSIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRQIKSS 393
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 87/211 (41%), Gaps = 43/211 (20%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++ +VTD L F +++ +K+ FGF+ + ++ A
Sbjct: 114 DSSTCRSVYVGNIHLQVTDTVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYYDRRYA 169
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA D T+G
Sbjct: 170 ALAILSLNGRQLYGQPIKVNWAYTSTPRED-------------TSG-------------- 202
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHP 301
+ ++VG+L EVT L F T D RV R +GFGFV +
Sbjct: 203 ----HFNIFVGDLCPEVTDATLFAFFSGYS--TCSDARVMWDQKTGRSRGFGFVSFRNQQ 256
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
+A AI N + L + I+C+W +K G
Sbjct: 257 DAQSAINDLNGKWLGNRQIRCNWATKGANAG 287
>gi|302772731|ref|XP_002969783.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
gi|302806762|ref|XP_002985112.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300146940|gb|EFJ13606.1| hypothetical protein SELMODRAFT_44478 [Selaginella moellendorffii]
gi|300162294|gb|EFJ28907.1| hypothetical protein SELMODRAFT_64568 [Selaginella moellendorffii]
Length = 425
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 238/378 (62%), Positives = 282/378 (74%), Gaps = 28/378 (7%)
Query: 21 HPSLLAA-PQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
HP L+ A QIEPI SGNLPP FDA++CRSVYVGNIH +VT ALL EVF++ GPLEGCKL
Sbjct: 27 HPGLITAMSQIEPIPSGNLPPGFDATSCRSVYVGNIHIKVTEALLAEVFATVGPLEGCKL 86
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGD 139
IKK+KSSYGFVDYFD RSAA AI+TLNG+ IFGQ IKVNWAYAS QREDT+GH+N+FVGD
Sbjct: 87 IKKEKSSYGFVDYFDHRSAAAAIITLNGKLIFGQSIKVNWAYASGQREDTTGHYNIFVGD 146
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPEVTDATL+A F ++P CSDARVMWDQ++GRSRG+GFVSFR++++A+ AIN++NGKWL
Sbjct: 147 LSPEVTDATLYAAFFMYPGCSDARVMWDQRSGRSRGYGFVSFRSKQEAERAINEMNGKWL 206
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS---------DGQEKSNE---DAPE 247
G+R IRCNWA K S ++ + SV E + D Q + D PE
Sbjct: 207 GSRPIRCNWATKSTGSQEDVPTPGPVSVPEQVAVVQVQMKQEPNHDEQHEDGAMQLDGPE 266
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
NNPQ+TTVYVGNL+ EVT +LHR FHAL VG IEDVRVQ++KGFGFVRY TH EAA AI
Sbjct: 267 NNPQFTTVYVGNLAHEVTQTELHRQFHALGVGVIEDVRVQKEKGFGFVRYRTHEEAAYAI 326
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP-----------PAPHLPGFSATDLAA 356
Q N R++CGK +KCSWGSKPTP G SS PLPPP A +SA DL A
Sbjct: 327 QAANGRVICGKSVKCSWGSKPTPAGASSNPLPPPPPVALPLQSLMAAGMNQAYSAADLLA 386
Query: 357 YERQIALSKIAG-AQALM 373
Y+R LS+ +G QAL+
Sbjct: 387 YQR---LSQSSGTGQALL 401
>gi|147797908|emb|CAN69464.1| hypothetical protein VITISV_023045 [Vitis vinifera]
Length = 844
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 229/369 (62%), Positives = 272/369 (73%), Gaps = 45/369 (12%)
Query: 85 SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEV 144
SSYGFVDY DR SA+LAI+TL+GR ++GQ +KVNWAYAS QREDTSGHFN+FVGDLSPEV
Sbjct: 182 SSYGFVDYLDRASASLAIMTLHGRQVYGQALKVNWAYASGQREDTSGHFNIFVGDLSPEV 241
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
TDATL+ACFSVF +CSDARVMWD KTGRS+G+GFVSFRNQ+DAQSAINDL+GKWLGNRQI
Sbjct: 242 TDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQDAQSAINDLSGKWLGNRQI 301
Query: 205 RCNWAAKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYTTVYVGNLSSE 263
RCNWA KGA ++KQ +++++ V LTNG SDG QE +NE+APENNP YTTVYVGNLS E
Sbjct: 302 RCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEEAPENNPAYTTVYVGNLSHE 361
Query: 264 ----------------------------VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
VT +LH FHAL G IE+VR+QRDKGFGFV
Sbjct: 362 FLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHALGAGVIEEVRIQRDKGFGFV 421
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH--LP------ 347
RY TH EAALAIQM N RI+ GK +KCSWGSKPTP GT+S PLPPP P+ LP
Sbjct: 422 RYHTHEEAALAIQMANGRIVRGKSMKCSWGSKPTPLGTASNPLPPPAQPYQILPTAGINQ 481
Query: 348 GFSATDLAAYERQIALSKIAGA----QALMHPQAQHALKLG-MG-AAGASQAIYDSSGFQ 401
G+S +L AY+RQ+ALS+ A + QALM H L G MG ++G +QA+YD G+
Sbjct: 482 GYSPAELLAYQRQLALSQAAASSLSGQALMQMTGHHGLAAGSMGVSSGGTQAMYD--GYP 539
Query: 402 NVATTQQLM 410
N ++ QQL+
Sbjct: 540 NNSSGQQLI 548
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 100/231 (43%), Gaps = 60/231 (25%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
R D S +++VG++ P+VT+A L FS +++ K+ YGFV + +++
Sbjct: 223 REDTSGHFNIFVGDLSPEVTDATLYACFSVFASCSDARVMWDHKTGRSKGYGFVSFRNQQ 282
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYA-------------------------SSQR----- 126
A AI L+G+ + + I+ NWA SQ
Sbjct: 283 DAQSAINDLSGKWLGNRQIRCNWATKGAGFNEDKQVNENQNAVVLTNGSSDGSQENTNEE 342
Query: 127 --EDTSGHFNVFVGDLSPE-VTDATLFACF-----SVFPTCSD----------------- 161
E+ + V+VG+LS E +T+ +F+ F S+F D
Sbjct: 343 APENNPAYTTVYVGNLSHEFLTEIIIFSGFLSVVRSIFSLTFDLCAQVTQAELHCQFHAL 402
Query: 162 -ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
A V+ + + R +GFGFV + E+A AI NG+ + + ++C+W +K
Sbjct: 403 GAGVIEEVRIQRDKGFGFVRYHTHEEAALAIQMANGRIVRGKSMKCSWGSK 453
>gi|4680340|gb|AAD27631.1|AF128457_5 putative nucleolysin [Oryza sativa Indica Group]
Length = 391
Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/381 (62%), Positives = 276/381 (72%), Gaps = 58/381 (15%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
AAPQIEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI+K+KS
Sbjct: 57 AAPQIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKS 116
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVT 145
S+GFVDY+DRRSAA+AIV+LNGR +
Sbjct: 117 SFGFVDYYDRRSAAIAIVSLNGRQL----------------------------------- 141
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
DARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLGNRQ+R
Sbjct: 142 ---------------DARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVR 186
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYTTVYVGNLSSEV 264
CNWA KGA +G+EKQ++DSK ++ELTNG S+G ++ +NED PENNPQYTTVYVGNL +V
Sbjct: 187 CNWATKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDV 246
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
S D+HR FH+L VG+IE+VRV RDKGFGFVRYSTH EAALAIQ GN +++ G+ IKCSW
Sbjct: 247 NSNDVHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSW 306
Query: 325 GSKPTPPG-TSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALK- 382
GSKPTPPG S+ PP P P PG SATDL AYER +ALSK+A ALM A ALK
Sbjct: 307 GSKPTPPGTASAPLPPPAPTPFNPGMSATDLLAYERTLALSKMAANPALMSQHA--ALKQ 364
Query: 383 --LGMGAAGASQAIYDSSGFQ 401
AGASQAIYD G+Q
Sbjct: 365 AAAMGMGAGASQAIYD-GGYQ 384
>gi|148807187|gb|ABR13303.1| putative oligouridylate-binding protein [Prunus dulcis]
Length = 233
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/229 (90%), Positives = 219/229 (95%), Gaps = 1/229 (0%)
Query: 71 TGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
TGPLEGCKLI+KDKSSYGFVDYFDRRSAA AIVTLNGRH+FGQPIKVNWAYASSQREDTS
Sbjct: 5 TGPLEGCKLIRKDKSSYGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAYASSQREDTS 64
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
GHFN+FVGDLSPEVTDATLFACFSV+ +CSDARVMWDQKTGRSRGFGFVSFR+Q+DAQSA
Sbjct: 65 GHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSA 124
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENN 249
INDLNGKWLG+RQIRCNWA KGATS D+KQSSDSKSVVELTNG S DGQEK NEDAPENN
Sbjct: 125 INDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEKPNEDAPENN 184
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYS 298
PQYTTVYVGNL+ EVTSVDLHRHFH+L GTIEDVRVQRDKGFGFVR+S
Sbjct: 185 PQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQRDKGFGFVRFS 233
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 76/179 (42%), Gaps = 44/179 (24%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
R D S +++VG++ P+VT+A L FS +++ K+ +GFV + ++
Sbjct: 60 REDTSGHFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRGFGFVSFRSQQ 119
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQRED-------------TSG------------ 131
A AI LNG+ + + I+ NWA + D T+G
Sbjct: 120 DAQSAINDLNGKWLGSRQIRCNWATKGATSNDDKQSSDSKSVVELTNGTSEDGQEKPNED 179
Query: 132 -------HFNVFVGDLSPEVTDATLFACFSVF--PTCSDARVMWDQKTGRSRGFGFVSF 181
+ V+VG+L+PEVT L F T D RV R +GFGFV F
Sbjct: 180 APENNPQYTTVYVGNLAPEVTSVDLHRHFHSLGAGTIEDVRVQ------RDKGFGFVRF 232
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 35/156 (22%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV + ++ A AI LNG+ L + I+ NWA + S E T+G
Sbjct: 21 YGFVDYFDRRSAAYAIVTLNGRHLFGQPIKVNWAY-------------ASSQREDTSG-- 65
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF--HALC--VGTIEDVRVQRDKG 291
+ ++VG+LS EVT L F ++ C + D + R +G
Sbjct: 66 ----------------HFNIFVGDLSPEVTDATLFACFSVYSSCSDARVMWDQKTGRSRG 109
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
FGFV + + +A AI N + L + I+C+W +K
Sbjct: 110 FGFVSFRSQQDAQSAINDLNGKWLGSRQIRCNWATK 145
>gi|4680498|gb|AAD27678.1|AF119222_10 TIA-1 related protein [Oryza sativa Japonica Group]
Length = 522
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/378 (62%), Positives = 276/378 (73%), Gaps = 60/378 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF 89
IEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI+K+KSS+GF
Sbjct: 192 IEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSSFGF 251
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATL 149
VDY+DRRSAA+AIV+LNGR +
Sbjct: 252 VDYYDRRSAAIAIVSLNGRQL--------------------------------------- 272
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
DARVMWDQKTGRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLGNRQ+RCNWA
Sbjct: 273 -----------DARVMWDQKTGRSRGFGFVSFRNQQDAQNAINELNGKWLGNRQVRCNWA 321
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
KGA +G+EKQ++DSK ++ELTNG S+G ++ +NED PENNPQYTTVYVGNL +V S D
Sbjct: 322 TKGANAGEEKQNTDSKGMIELTNGSSEGGKDNANEDGPENNPQYTTVYVGNLPHDVNSND 381
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+HR FH+L VG+IE+VRV RDKGFGFVRYSTH EAALAIQ GN +++ G+ IKCSWGSKP
Sbjct: 382 VHRFFHSLGVGSIEEVRVTRDKGFGFVRYSTHEEAALAIQTGNGQLIGGRQIKCSWGSKP 441
Query: 329 TPPGT-SSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQH-ALK---L 383
TPPGT S+ PP PAP PG SATDL AYER +ALSK+A ALM +QH ALK
Sbjct: 442 TPPGTASAPLPPPAPAPFNPGMSATDLLAYERTLALSKMAANPALM---SQHAALKQAAA 498
Query: 384 GMGAAGASQAIYDSSGFQ 401
AGASQAIYD G+Q
Sbjct: 499 MGMGAGASQAIYD-GGYQ 515
>gi|168027694|ref|XP_001766364.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682273|gb|EDQ68692.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 224/378 (59%), Positives = 275/378 (72%), Gaps = 31/378 (8%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ SGNLPP FDA++CRSVYVGNIH +VT LL EVF+S GPLEGCKLI+KDKSSYG
Sbjct: 2 QMEPMASGNLPPGFDATSCRSVYVGNIHSRVTEGLLAEVFASLGPLEGCKLIRKDKSSYG 61
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS-GHFNVFVGDLSPEVTDA 147
FVDYFD RSA A+ TLNGR +FGQ IKVNWAYAS QREDT+ GHFNVFVGDLS EVTDA
Sbjct: 62 FVDYFDHRSAVAALSTLNGRQMFGQSIKVNWAYASGQREDTTAGHFNVFVGDLSAEVTDA 121
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
TLFA F ++P+CSDARVMWDQ++GRSRGFGFVSFR+Q++A+S+I+++ GKWLG R IRCN
Sbjct: 122 TLFAAFCIYPSCSDARVMWDQRSGRSRGFGFVSFRSQQEAESSISEMTGKWLGTRPIRCN 181
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGIS----------DGQEKSNEDAPENNPQYTTVYV 257
WAAK + + Q+ +SK T G++ D Q+ S D PE N QYTTVYV
Sbjct: 182 WAAK---TNNTIQADESKLT---TRGLTLCCLADVRSEDRQDSSAGDGPEINSQYTTVYV 235
Query: 258 GNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG 317
GNLS ++T +LHR FH+L G IEDVRVQ++KGFGFVRY TH EAA AIQ N R++ G
Sbjct: 236 GNLSQQITQAELHRQFHSLGAGVIEDVRVQKEKGFGFVRYRTHAEAAFAIQAANGRVIWG 295
Query: 318 KPIKCSWGSKPTPPG-TSSTPLPPPPAPHLPGFSAT---------DLAAYERQIALSKIA 367
K +KCSWGSKPT PG +S+ PP H G A+ D+ AY+ L++
Sbjct: 296 KSLKCSWGSKPTQPGASSAPLPSPPSVGHYQGIMASGVNLGYGVADILAYQN---LTRAG 352
Query: 368 GAQALMHPQAQHALKLGM 385
+AL+ P +L +G+
Sbjct: 353 AGRALL-PVPHQSLGMGL 369
>gi|94442922|emb|CAJ91135.1| oligouridylate binding protein [Platanus x acerifolia]
Length = 229
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/229 (84%), Positives = 213/229 (93%), Gaps = 1/229 (0%)
Query: 71 TGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
TGPLEGCKLI+K+ SSYGFVDYFDRRSAALAI+TLNGRH+FGQ IKVNWAYAS QREDTS
Sbjct: 1 TGPLEGCKLIRKENSSYGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWAYASGQREDTS 60
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
GHFN+FVGDLSPEVTDATLFAC SV+P+CSDARVMWDQKTGRSRGFGFVSFRNQ+DAQSA
Sbjct: 61 GHFNIFVGDLSPEVTDATLFACLSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSA 120
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS-DGQEKSNEDAPENN 249
INDL GKWLG+RQIRCNWAAKGA + D+KQ++D+KSVVELT+G S DGQE N+DAPENN
Sbjct: 121 INDLTGKWLGSRQIRCNWAAKGAGANDDKQNTDAKSVVELTSGTSEDGQETINDDAPENN 180
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYS 298
PQYTTVYVGNL+ EVT +DLHRHFHAL G IE+VRVQRDKGFGFVRYS
Sbjct: 181 PQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYS 229
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 40/177 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
R D S +++VG++ P+VT+A L S +++ K+ +GFV + +++
Sbjct: 56 REDTSGHFNIFVGDLSPEVTDATLFACLSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQ 115
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAY-------------ASSQREDTSG------------ 131
A AI L G+ + + I+ NWA A S E TSG
Sbjct: 116 DAQSAINDLTGKWLGSRQIRCNWAAKGAGANDDKQNTDAKSVVELTSGTSEDGQETINDD 175
Query: 132 -------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ V+VG+L+PEVT L F A V+ + + R +GFGFV +
Sbjct: 176 APENNPQYTTVYVGNLAPEVTQLDLHRHFHALG----AGVIEEVRVQRDKGFGFVRY 228
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 67/159 (42%), Gaps = 41/159 (25%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV + ++ A AI LNG+ L + I+ NWA +
Sbjct: 17 YGFVDYFDRRSAALAILTLNGRHLFGQAIKVNWA------------------------YA 52
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG-TIEDVRVQ------R 288
GQ E+ + ++VG+LS EVT L F L V + D RV R
Sbjct: 53 SGQR-------EDTSGHFNIFVGDLSPEVTDATL---FACLSVYPSCSDARVMWDQKTGR 102
Query: 289 DKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+GFGFV + +A AI + L + I+C+W +K
Sbjct: 103 SRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAAK 141
>gi|326531842|dbj|BAK01297.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/247 (77%), Positives = 221/247 (89%), Gaps = 1/247 (0%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
HP LLAAP IEPI+SGNLPP FD+STCRSVYVGNIH QVT++LL EVF S GP+EGCKLI
Sbjct: 45 HPGLLAAPHIEPIVSGNLPPGFDSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLI 104
Query: 81 KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDL 140
+K+KSS+GFVDY+DRR AALAIV+LNGR +FGQPIKVNWAYAS+QREDTSGHFN+FVGDL
Sbjct: 105 RKEKSSFGFVDYYDRRYAALAIVSLNGRQLFGQPIKVNWAYASTQREDTSGHFNIFVGDL 164
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEVTDA LF FS + TCSDARVMWDQ++GRSRGFGFVSFRNQ+DAQ+AIN+LNGKWLG
Sbjct: 165 CPEVTDAALFVFFSAYSTCSDARVMWDQQSGRSRGFGFVSFRNQQDAQTAINELNGKWLG 224
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD-GQEKSNEDAPENNPQYTTVYVGN 259
NRQIRCNWA KGA +G+ KQS+DSK +VEL +G S+ G+E +NED PE+NPQYTTVYVGN
Sbjct: 225 NRQIRCNWATKGANAGEVKQSTDSKGMVELISGSSEAGKENANEDGPEDNPQYTTVYVGN 284
Query: 260 LSSEVTS 266
LS +V S
Sbjct: 285 LSHDVLS 291
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 43/206 (20%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++ +VTD+ L F +++ +K+ FGFV + ++ A
Sbjct: 67 DSSTCRSVYVGNIHLQVTDSLLHEVFQSIGPVEGCKLIRKEKSS----FGFVDYYDRRYA 122
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA D T+G
Sbjct: 123 ALAIVSLNGRQLFGQPIKVNWAYASTQRED-------------TSG-------------- 155
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHP 301
+ ++VG+L EVT L F A T D RV R +GFGFV +
Sbjct: 156 ----HFNIFVGDLCPEVTDAALFVFFSAY--STCSDARVMWDQQSGRSRGFGFVSFRNQQ 209
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A AI N + L + I+C+W +K
Sbjct: 210 DAQTAINELNGKWLGNRQIRCNWATK 235
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK--GFGFVRYSTHPEAALAIQMGN 311
+VYVGN+ +VT LH F + +G +E ++ R + FGFV Y AALAI N
Sbjct: 73 SVYVGNIHLQVTDSLLHEVFQS--IGPVEGCKLIRKEKSSFGFVDYYDRRYAALAIVSLN 130
Query: 312 ARILCGKPIKCSWGSKPT 329
R L G+PIK +W T
Sbjct: 131 GRQLFGQPIKVNWAYAST 148
>gi|218201471|gb|EEC83898.1| hypothetical protein OsI_29913 [Oryza sativa Indica Group]
Length = 407
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/400 (53%), Positives = 260/400 (65%), Gaps = 63/400 (15%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN+HP VT +LL EVF S+G +E CKLI+K+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFG 113
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI GQ IKVNWAYAS+QREDTS
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHICGQAIKVNWAYASTQREDTS----------------VM 157
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L +C P DA E+A++AI ++ GKWLG+RQIRCNW
Sbjct: 158 LESCGITKP---DA---------------------PEEAETAITEMTGKWLGSRQIRCNW 193
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSS 262
A K + +EKQ +D+ + V LTNG S Q+ +++ PENNP TTVYVGNL
Sbjct: 194 ATK--NNAEEKQETDNHNAVVLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGH 251
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
EV +LHRHF+ L VG IE+VRVQ+DKGFGFVRYS H EAALAIQM N ++ GKPIKC
Sbjct: 252 EVNRDELHRHFYNLGVGAIEEVRVQQDKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKC 311
Query: 323 SWGSKPTPPGTSST----------PLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQAL 372
SWG+KPTPPGTSS P+P P GFSA D+ AY+RQ+ LS++A Q
Sbjct: 312 SWGNKPTPPGTSSKPLPPPLPSYQPVPMAGVPQ--GFSAADIVAYQRQLTLSQVAAGQIA 369
Query: 373 MHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
+ G+ AAG SQA+YD G+ N ++ QQLMYY
Sbjct: 370 GQHGLAGQVSAGLLAAG-SQALYD--GYPNQSSAQQLMYY 406
>gi|357479383|ref|XP_003609977.1| RNA-binding protein [Medicago truncatula]
gi|355511032|gb|AES92174.1| RNA-binding protein [Medicago truncatula]
Length = 245
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/235 (77%), Positives = 205/235 (87%), Gaps = 2/235 (0%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
M + +Q M++Q SLYQ HP+L+ PQIEPILSGNLPP FD+STCRSVYVGNIHPQV+
Sbjct: 1 MLPQKFRQNPMIEQHSLYQ-HPALIT-PQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVS 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
LLQE+FSS G LEGCKLI+K+KSSYGFVDYFDR SAA+AIVTLNGR+IFGQ IKVNWA
Sbjct: 59 EPLLQELFSSAGALEGCKLIRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWA 118
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
Y QREDTSGHF++FVGDLSPEVTDATL+ACFS + +CSDARVMWDQKTGRSRGFGFVS
Sbjct: 119 YTRGQREDTSGHFHIFVGDLSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGFVS 178
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
FRNQ++AQSAINDL GKWLG+RQIRCNWA KGA E QSS+SKSVVELT+G S
Sbjct: 179 FRNQQEAQSAINDLTGKWLGSRQIRCNWATKGANMNGENQSSESKSVVELTSGTS 233
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 43/206 (20%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++ P+V++ L FS +++ +K+ +GFV + ++ A
Sbjct: 41 DSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKLIRKEKSS----YGFVDYFDRSSA 96
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ + + I+ NWA + GQ E
Sbjct: 97 AIAIVTLNGRNIFGQSIKVNWA------------------------YTRGQR-------E 125
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHP 301
+ + ++VG+LS EVT L+ F A + D RV R +GFGFV +
Sbjct: 126 DTSGHFHIFVGDLSPEVTDATLYACFSAY--SSCSDARVMWDQKTGRSRGFGFVSFRNQQ 183
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
EA AI + L + I+C+W +K
Sbjct: 184 EAQSAINDLTGKWLGSRQIRCNWATK 209
>gi|449488215|ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232331 [Cucumis sativus]
Length = 343
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/231 (78%), Positives = 197/231 (85%), Gaps = 12/231 (5%)
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG-QEKSNEDAPENNPQ 251
D GKWLG+RQIRCNWA KGA SGD+KQSSDS+SVVELT+G SDG QEKSNEDAPENNPQ
Sbjct: 114 DDKGKWLGSRQIRCNWATKGANSGDDKQSSDSRSVVELTSGTSDGGQEKSNEDAPENNPQ 173
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
YTTVYVGNL+ EVTSVDLHR+FHAL GTIEDVRVQRDKGFGFVRYST+ EAALAIQ GN
Sbjct: 174 YTTVYVGNLAPEVTSVDLHRYFHALGAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGN 233
Query: 312 ARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQA 371
AR++CGKPIKCSWGSKPTPPGT+STPLPPP H+ G SA DLA+YERQ+ALSK+ AQA
Sbjct: 234 ARVVCGKPIKCSWGSKPTPPGTNSTPLPPPNVGHISGLSAADLASYERQMALSKMGAAQA 293
Query: 372 LMHPQ-AQHALK---------LGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
LMHPQ AQHALK +GMG AG SQ IYD GFQN+ATTQQLMYY
Sbjct: 294 LMHPQAAQHALKQAAMGMGMGIGMGGAGTSQTIYD-GGFQNIATTQQLMYY 343
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSS--TGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLN 106
+VYVGN+ P+VT+ L F + G +E + +++DK +GFV Y AALAI T N
Sbjct: 176 TVYVGNLAPEVTSVDLHRYFHALGAGTIEDVR-VQRDKG-FGFVRYSTNAEAALAIQTGN 233
Query: 107 GRHIFGQPIKVNW 119
R + G+PIK +W
Sbjct: 234 ARVVCGKPIKCSW 246
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
E+ + V+VG+L+PEVT L F A + D + R +GFGFV + +
Sbjct: 169 ENNPQYTTVYVGNLAPEVTSVDLHRYFHAL----GAGTIEDVRVQRDKGFGFVRYSTNAE 224
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAK 211
A AI N + + + I+C+W +K
Sbjct: 225 AALAIQTGNARVVCGKPIKCSWGSK 249
>gi|255634993|gb|ACU17855.1| unknown [Glycine max]
Length = 210
Score = 333 bits (855), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 166/208 (79%), Positives = 179/208 (86%), Gaps = 9/208 (4%)
Query: 1 MQQHRLKQQTMMQQQSLYQ---------YHPSLLAAPQIEPILSGNLPPRFDASTCRSVY 51
MQ HRLKQQ QQQ+L Q YHP LLA PQIEP SGNLPP FD STCRSVY
Sbjct: 1 MQNHRLKQQQQQQQQALMQQALLQQQSLYHPGLLAPPQIEPYPSGNLPPGFDPSTCRSVY 60
Query: 52 VGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIF 111
VGNIH QVT LLQEVFS TGP+EGCKLI+KDKSSYGF+ YFDRRSAALAI++LNGRH+F
Sbjct: 61 VGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLNGRHLF 120
Query: 112 GQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG 171
GQPIKVNWAY S QREDTSGH+N+FVGDLSPEVTDATLFAC SV+P+CSDARVMWDQKTG
Sbjct: 121 GQPIKVNWAYTSGQREDTSGHYNIFVGDLSPEVTDATLFACSSVYPSCSDARVMWDQKTG 180
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWL 199
RSRGFGFVSFRNQ+DAQS+INDL GKWL
Sbjct: 181 RSRGFGFVSFRNQQDAQSSINDLTGKWL 208
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 77/184 (41%), Gaps = 39/184 (21%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D S +V+VG++ +VT+ L FS +++ K+ +GF+ + ++ A
Sbjct: 52 DPSTCRSVYVGNIHTQVTEPLLQEVFSGTGPVEGCKLIRKDKSS----YGFIHYFDRRSA 107
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA TSG + +S
Sbjct: 108 ALAILSLNGRHLFGQPIKVNWA---YTSGQREDTSG------------------------ 140
Query: 248 NNPQYTTVYVGNLSSEVTSVDLH--RHFHALC--VGTIEDVRVQRDKGFGFVRYSTHPEA 303
+ ++VG+LS EVT L + C + D + R +GFGFV + +A
Sbjct: 141 ----HYNIFVGDLSPEVTDATLFACSSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 196
Query: 304 ALAI 307
+I
Sbjct: 197 QSSI 200
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVR-VQRDKG-FGFVRYSTHPEAALAIQMGN 311
+VYVGN+ ++VT L F G +E + +++DK +GF+ Y AALAI N
Sbjct: 58 SVYVGNIHTQVTEPLLQEVFSG--TGPVEGCKLIRKDKSSYGFIHYFDRRSAALAILSLN 115
Query: 312 ARILCGKPIKCSW 324
R L G+PIK +W
Sbjct: 116 GRHLFGQPIKVNW 128
>gi|413919829|gb|AFW59761.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
gi|413919830|gb|AFW59762.1| hypothetical protein ZEAMMB73_712339 [Zea mays]
Length = 437
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 150/167 (89%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF 89
IEPI+SGNLPP FD+STCRSVYV NIH QVT+A+LQEVF S GP+EGCKLI+K+KSS+GF
Sbjct: 258 IEPIVSGNLPPGFDSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSSFGF 317
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATL 149
+DY DRR AALAI++LNGR ++GQPIKVNWAY S+ RE TSGHFN+FVGDL PEVTDATL
Sbjct: 318 IDYHDRRYAALAILSLNGRQLYGQPIKVNWAYTSTPREGTSGHFNIFVGDLCPEVTDATL 377
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
FA FS + TCSDA VMWDQKTGRSRGFGFVSFRNQ+DAQS INDLNG
Sbjct: 378 FAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQDAQSEINDLNG 424
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+V ++ +VTDA L F +++ +K+ FGF+ + ++ A
Sbjct: 271 DSSTCRSVYVCNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSS----FGFIDYHDRRYA 326
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA + + E T+G
Sbjct: 327 ALAILSLNGRQLYGQPIKVNWAY-------------TSTPREGTSG-------------- 359
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHF--HALC--VGTIEDVRVQRDKGFGFVRYSTHPEA 303
+ ++VG+L EVT L F ++ C + D + R +GFGFV + +A
Sbjct: 360 ----HFNIFVGDLCPEVTDATLFAFFSGYSTCSDASVMWDQKTGRSRGFGFVSFRNQQDA 415
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK--GFGFVRYSTHPEAALAIQMGN 311
+VYV N+ +VT L F + +G +E ++ R + FGF+ Y AALAI N
Sbjct: 277 SVYVCNIHLQVTDAVLQEVFQS--IGPVEGCKLIRKEKSSFGFIDYHDRRYAALAILSLN 334
Query: 312 ARILCGKPIKCSWGSKPTP-PGTS 334
R L G+PIK +W TP GTS
Sbjct: 335 GRQLYGQPIKVNWAYTSTPREGTS 358
>gi|388511131|gb|AFK43627.1| unknown [Lotus japonicus]
Length = 167
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 127/152 (83%), Positives = 144/152 (94%)
Query: 34 LSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYF 93
+SGNLPP FD+STCRSVYVGNIHPQVT++LLQE+F+ G LEGCKLI+K+KSSYGFVDY+
Sbjct: 1 MSGNLPPGFDSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKEKSSYGFVDYY 60
Query: 94 DRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
DR SAA AIVTLNGR++FGQPIKVNWAYA SQREDTSGHFN+FVGDLSPEVTDATL+ACF
Sbjct: 61 DRSSAAFAIVTLNGRNLFGQPIKVNWAYARSQREDTSGHFNIFVGDLSPEVTDATLYACF 120
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
S +P+CSDARVMWDQ+TGRSRGFGFVSFRNQ+
Sbjct: 121 SAYPSCSDARVMWDQQTGRSRGFGFVSFRNQQ 152
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 45/193 (23%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D+S +V+VG++ P+VTD+ L F+ +++ +K+ +GFV + ++ A
Sbjct: 10 DSSTCRSVYVGNIHPQVTDSLLQELFAGAGALEGCKLIRKEKSS----YGFVDYYDRSSA 65
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI LNG+ L + I+ NWA ++S E T+G
Sbjct: 66 AFAIVTLNGRNLFGQPIKVNWAY-------------ARSQREDTSG-------------- 98
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTH- 300
+ ++VG+LS EVT L+ F A + D RV R +GFGFV +
Sbjct: 99 ----HFNIFVGDLSPEVTDATLYACFSAY--PSCSDARVMWDQQTGRSRGFGFVSFRNQQ 152
Query: 301 -PEAALAIQMGNA 312
P+ L I +G+
Sbjct: 153 MPKVLLMISLGSG 165
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK--GFGFVRYSTHPEAALAIQMGN 311
+VYVGN+ +VT L F G +E ++ R + +GFV Y AA AI N
Sbjct: 16 SVYVGNIHPQVTDSLLQELFAG--AGALEGCKLIRKEKSSYGFVDYYDRSSAAFAIVTLN 73
Query: 312 ARILCGKPIKCSW 324
R L G+PIK +W
Sbjct: 74 GRNLFGQPIKVNW 86
>gi|388519507|gb|AFK47815.1| unknown [Medicago truncatula]
Length = 243
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 127/168 (75%), Positives = 144/168 (85%), Gaps = 3/168 (1%)
Query: 20 YHPSLLAAP---QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG 76
+HP +LAA Q+EP+ SGNLPP FDAS CRSVYVGNIH VT+ LL EVF S GPL G
Sbjct: 29 HHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAG 88
Query: 77 CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
CKLI+K+KSSYGFVDY DR SAALAI+TL+GR ++GQ +KVNWAYA+S REDTSG FNVF
Sbjct: 89 CKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGRFNVF 148
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
VGDLSPEVTDATLFACFSV+ TCSDARVMWD KTGRS+G+GFVSFR+
Sbjct: 149 VGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDH 196
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 43/179 (24%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D S +V+VG++ VTD L F + +++ +K+ +GFV + ++ A
Sbjct: 55 DASACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSS----YGFVDYHDRASA 110
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
AI L+G+ L + ++ NWA ++ E
Sbjct: 111 ALAIMTLHGRQLYGQALKVNWAYANSSR-------------------------------E 139
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTH 300
+ V+VG+LS EVT L F T D RV R KG+GFV + H
Sbjct: 140 DTSGRFNVFVGDLSPEVTDATLFACFSVY--TTCSDARVMWDHKTGRSKGYGFVSFRDH 196
>gi|413921568|gb|AFW61500.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 409
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/319 (45%), Positives = 195/319 (61%), Gaps = 42/319 (13%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE-- 185
D S +V+VG+++P VT++ L F +++ +K+ FGFV + ++
Sbjct: 98 DPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSA 153
Query: 186 -----------------DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV 228
+A++AI ++ GKWLG+RQIRCNWA K T+ +EK +D+ + V
Sbjct: 154 ALAIMTLHGRHIISFLFEAETAITEMTGKWLGSRQIRCNWATK--TNSEEKPETDNHNAV 211
Query: 229 ELTNGISDG------QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
LTNG S Q+ +++ PENNP TTVYVGNL EV +LHRHF+ L VG IE
Sbjct: 212 VLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIE 271
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPP 342
++RVQ+DKGFGFVRYSTH EAALAIQM N ++ GK IKCSWG+KPTPPGT+S PLPPP
Sbjct: 272 EIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNKPTPPGTTSKPLPPPV 331
Query: 343 APHLP---------GFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLGMGAAGASQA 393
A + P GF+A +L AY+RQ+ALS+ A Q + G+ AA SQA
Sbjct: 332 ASYQPAVAMSGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQVSAGLLAAAGSQA 391
Query: 394 IYDSSGFQNVATTQQLMYY 412
+YD G+ N ++ QQLMYY
Sbjct: 392 LYD--GYPNQSSAQQLMYY 408
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 122/232 (52%), Gaps = 50/232 (21%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF 89
+EPI +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+GF
Sbjct: 85 MEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGF 144
Query: 90 VDYFDRRSAALAIVTLNGRHIF-------------------GQPIKVNWAYASSQRE--D 128
VDY+DRRSAALAI+TL+GRHI + I+ NWA ++ E +
Sbjct: 145 VDYYDRRSAALAIMTLHGRHIISFLFEAETAITEMTGKWLGSRQIRCNWATKTNSEEKPE 204
Query: 129 TSGHFNVFV--GDLSPEVTDATLFA-----------CFSVFPTCSDARVMWDQ------- 168
T H V + G + TDA+ A C +V+ V D+
Sbjct: 205 TDNHNAVVLTNGSSTNSATDASQDAGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYN 264
Query: 169 ---------KTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
+ + +GFGFV + +A AI NG + + I+C+W K
Sbjct: 265 LGVGAIEEIRVQQDKGFGFVRYSTHGEAALAIQMANGLVVRGKSIKCSWGNK 316
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 138/315 (43%), Positives = 189/315 (60%), Gaps = 17/315 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 105 LNGRHIFGQPIKVNWAY-ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY S+ +EDTSGHF+VFVGDLSPEV DA L FS F T SDAR
Sbjct: 75 LNGRKIFDTEIRVNWAYQGSTAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDAR 134
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQ 220
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA +GA +
Sbjct: 135 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPTG 194
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ + + + G S E + P Y TTVYVGNL T DL F + +G
Sbjct: 195 AGGAPAPINFQGG-----PLSYETVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQS--IG 247
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP 339
+ ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG GT
Sbjct: 248 YLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQMVHGRPIKCSWGKDRADGGTVQPAAA 307
Query: 340 PPPAPHLPGFSATDL 354
P P + D+
Sbjct: 308 ISPNPAAAPYGNVDM 322
>gi|409083337|gb|EKM83694.1| hypothetical protein AGABI1DRAFT_110331 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 444
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 15/288 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D RSA A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTSGH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + T G
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ-KTQGGAPAVQQ 196
Query: 224 SKSVVELTNGIS-----DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALC 277
S T G G S E + P Y TTVYVGNL T DL F +
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQS-- 254
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 255 IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 46/207 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWA------------------------------------YA 122
AI T+NG + + I+VNWA Y
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYE 221
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
S ++ + + V+VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 SVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLD 275
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWA 209
E A AI L G+ + R I+C+W
Sbjct: 276 THEHAAMAIVQLQGQMVHGRPIKCSWG 302
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G +++ ED +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQG--------------------------QQNKED----TSGH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDDVLAKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPA 343
I N L + I+ +W ++ T G + P PA
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPA 201
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-------GFGFVRY 297
P P+ +YVGNLS VT L F G ++ V++ D+ +GFV Y
Sbjct: 8 GPAEAPRRAHLYVGNLSPRVTEYMLTEIF--AVAGPVQHVKIIPDRNYQHGGLNYGFVEY 65
Query: 298 STHPEAALAIQMGNARILCGKPIKCSW 324
A A+Q N R + I+ +W
Sbjct: 66 MDMRSAETALQTLNGRKIFDTEIRVNW 92
>gi|426201609|gb|EKV51532.1| hypothetical protein AGABI2DRAFT_189771 [Agaricus bisporus var.
bisporus H97]
Length = 469
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/288 (46%), Positives = 178/288 (61%), Gaps = 15/288 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D RSA A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTSGH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + T G
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ-KTQGGAPAVQQ 196
Query: 224 SKSVVELTNGIS-----DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALC 277
S T G G S E + P Y TTVYVGNL T DL F +
Sbjct: 197 SPRPAGSTGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQS-- 254
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 255 IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 302
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 46/206 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWA------------------------------------YA 122
AI T+NG + + I+VNWA Y
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPAGSTGGAPAPINFQGGPLSYE 221
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
S ++ + + V+VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 SVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLD 275
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNW 208
E A AI L G+ + R I+C+W
Sbjct: 276 THEHAAMAIVQLQGQMVHGRPIKCSW 301
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRSAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G +++ ED +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQG--------------------------QQNKED----TSGH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDDVLAKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPA 343
I N L + I+ +W ++ T G + P PA
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGGAPAVQQSPRPA 201
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-------GFGFVRYS 298
P P+ +YVGNLS VT L F G ++ V++ D+ +GFV Y
Sbjct: 9 PAEAPRRAHLYVGNLSPRVTEYMLTEIF--AVAGPVQHVKIIPDRNYQHGGLNYGFVEYM 66
Query: 299 THPEAALAIQMGNARILCGKPIKCSW 324
A A+Q N R + I+ +W
Sbjct: 67 DMRSAETALQTLNGRKIFDTEIRVNW 92
>gi|170084123|ref|XP_001873285.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650837|gb|EDR15077.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 422
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/309 (44%), Positives = 189/309 (61%), Gaps = 17/309 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 13 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 72
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDT+GH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 73 LNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFSAFGTMSDAR 132
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + ++
Sbjct: 133 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPTTTAS 192
Query: 224 S-KSVVELTNGIS------DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHA 275
S + +T G + G S E + P Y +TVYVGNL T DL F +
Sbjct: 193 SPRPGGAVTTGSAPAPINFQGGPLSYESVVQQTPAYNSTVYVGNLVPYCTQADLIPLFQS 252
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG K G ++
Sbjct: 253 --IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG-KDRADGGTA 309
Query: 336 TPLPPPPAP 344
P P P P
Sbjct: 310 QPGGPSPQP 318
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 43/217 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 12 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 71
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + E+ +
Sbjct: 72 TLNGRKIFDTEIRVNWAYQG------------------------------QQNKEDTTGH 101
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 102 YHVFVGDLSPEVNDEVLAKAFSAF--GTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 159
Query: 307 IQMGNARILCGKPIKCSWGSKPT----PPGTSSTPLP 339
I N L + I+ +W ++ T P T+S+P P
Sbjct: 160 IATMNGEWLGSRAIRVNWANQKTQGAPPTTTASSPRP 196
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 231 TVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 288
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 289 MVHGRPIKCSWG 300
>gi|389742195|gb|EIM83382.1| polyadenylate-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 422
Score = 251 bits (640), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 134/305 (43%), Positives = 183/305 (60%), Gaps = 16/305 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTS HF+VFVGDLSPEV D L F+ F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + G
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGLPVSGGP 197
Query: 224 SKSVVELTNGIS------DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHAL 276
+ S G + G S E + P + TTVYVGNL T DL F +
Sbjct: 198 TASPTRTGAGGAPAPINFQGGPLSYESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQS- 256
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG G + T
Sbjct: 257 -IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRADGGAAGT 315
Query: 337 -PLPP 340
P+ P
Sbjct: 316 APMSP 320
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 89/216 (41%), Gaps = 48/216 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + F++ G + +++ S YGF+ + D+ A
Sbjct: 102 DTSNHFHVFVGDLSPEVNDDVLAKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWA--------------YASSQREDTSG------------- 131
AI T+NG + + I+VNWA AS R G
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGLPVSGGPTASPTRTGAGGAPAPINFQGGPLS 221
Query: 132 ---------HFN--VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
FN V+VG+L P T + L F S+ R+ D RGF FV
Sbjct: 222 YESVVQQTPAFNTTVYVGNLVPYCTQSDLIPLFQSIGYLSEIRMQAD------RGFAFVK 275
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E A AI L G+ + R I+C+W A G
Sbjct: 276 LDTHEHAAMAIVQLQGQLVHGRPIKCSWGKDRADGG 311
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 92/206 (44%), Gaps = 39/206 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + E+ +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQG------------------------------QQNKEDTSNH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 FHVFVGDLSPEVNDDVLAKAFAAF--GTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPG 332
I N L + I+ +W ++ T G
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGG 190
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/309 (44%), Positives = 190/309 (61%), Gaps = 21/309 (6%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 78
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDT+GH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 79 LNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDAR 138
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + T G +S
Sbjct: 139 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ-KTQGSVAVASP 197
Query: 224 SKSVVELTNGIS-----DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALC 277
+ T G G S + + P Y +TVYVGNL T DL F +
Sbjct: 198 PRPGA--TGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQS-- 253
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST- 336
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG K GT++
Sbjct: 254 IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG-KDRADGTTAQP 312
Query: 337 --PLPPPPA 343
PL P PA
Sbjct: 313 GGPLSPTPA 321
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 40/217 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR-GFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 77
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G Q K E+ +
Sbjct: 78 TLNGRKIFDTEIRVNWAYQGQ------------------------QNK------EDTTGH 107
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 108 YHVFVGDLSPEVNDEILGKAFSAF--GTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 165
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPA 343
I N L + I+ +W ++ T G+ + PP P
Sbjct: 166 IATMNGEWLGSRAIRVNWANQKT-QGSVAVASPPRPG 201
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 232 TVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 289
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 290 MVHGRPIKCSWG 301
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 137/315 (43%), Positives = 187/315 (59%), Gaps = 27/315 (8%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTS H++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + + Q
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ------KTQGGP 191
Query: 224 SKSVVELTNGIS--------DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFH 274
S ++ +G+ G S E + P Y TTVYVGNL T DL F
Sbjct: 192 SPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 251
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK----PTP 330
+ +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG P
Sbjct: 252 S--IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGTAP 309
Query: 331 PGTSSTPLPPPPAPH 345
T S P AP+
Sbjct: 310 LSTGSMSPTPAAAPY 324
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 44/205 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------------------------------YASS 124
AI T+NG + + I+VNWA Y S
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESV 221
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
++ + + V+VG+L P T A L F S+ R+ D RGF FV
Sbjct: 222 VQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTH 275
Query: 185 EDAQSAINDLNGKWLGNRQIRCNWA 209
E A AI L G+ + R I+C+W
Sbjct: 276 EHAAMAIVQLQGQMVHGRPIKCSWG 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 48/222 (21%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G +++ ED +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQG--------------------------QQNKEDTSN----H 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDEVLGKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPG 348
I N L + I+ +W ++ T G P+P +PG
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKTQGG---------PSPTMPG 197
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 231 TVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 288
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSP 142
+ G+PIK +W ++ G + G +SP
Sbjct: 289 MVHGRPIKCSWG-----KDRADGTAPLSTGSMSP 317
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/287 (45%), Positives = 179/287 (62%), Gaps = 15/287 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ G ++ K+I S YGFV+Y D R+A A+ T
Sbjct: 17 LYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQT 76
Query: 105 LNGRHIFGQPIKVNWAY-ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY ++++EDT+ HF+VFVGDLSPEV D L FS F + SDAR
Sbjct: 77 LNGRKIFDTEIRVNWAYQGNNKQEDTTNHFHVFVGDLSPEVNDEILSKAFSGFKSISDAR 136
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD TG+SRG+GF+SFR + DA+ AI+ +NG+WLG+R IR NWA + +G + +D
Sbjct: 137 VMWDMNTGKSRGYGFLSFREKTDAEQAISTMNGEWLGSRAIRVNWANQKTQTGSHRL-ND 195
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
+ NG S E + P Y TTVY+GNL+ T DL F A G I
Sbjct: 196 LMPTMNAFNG-----PLSYEAVFQQTPAYNTTVYIGNLTPYTTQADLVPIFQAF--GYII 248
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+VR+Q D+GF FV+ +H A++AI ++ G+PIKCSWG T
Sbjct: 249 EVRMQADRGFAFVKLDSHENASMAIVQLQGTLIQGRPIKCSWGRDRT 295
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 16 HLYVGNLSPRVTEYMLTEIFAVAGHVQSVKIIPDRNFSHGGLNYGFVEYTDMRAAETALQ 75
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA + G+ KQ E+ +
Sbjct: 76 TLNGRKIFDTEIRVNWAYQ----GNNKQ--------------------------EDTTNH 105
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F +I D RV D +G+GF+ + +A A
Sbjct: 106 FHVFVGDLSPEVNDEILSKAFSGFK--SISDARVMWDMNTGKSRGYGFLSFREKTDAEQA 163
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGT 333
I N L + I+ +W ++ T G+
Sbjct: 164 ISTMNGEWLGSRAIRVNWANQKTQTGS 190
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 7/87 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY+GN+ P T A L +F + G + ++ + D+ + FV +A++AIV L G
Sbjct: 222 TVYIGNLTPYTTQADLVPIFQAFGYIIEVRM-QADR-GFAFVKLDSHENASMAIVQLQGT 279
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNV 135
I G+PIK +W R+ T+ NV
Sbjct: 280 LIQGRPIKCSWG-----RDRTANANNV 301
>gi|336376899|gb|EGO05234.1| hypothetical protein SERLA73DRAFT_44756 [Serpula lacrymans var.
lacrymans S7.3]
Length = 523
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/309 (44%), Positives = 190/309 (61%), Gaps = 21/309 (6%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDT+GH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 76 LNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDAR 135
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + T G +S
Sbjct: 136 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQ-KTQGSVAVASP 194
Query: 224 SKSVVELTNGIS-----DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALC 277
+ T G G S + + P Y +TVYVGNL T DL F +
Sbjct: 195 PRPGA--TGGAPAPINFQGGPLSYDSVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQS-- 250
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST- 336
+G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG K GT++
Sbjct: 251 IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG-KDRADGTTAQP 309
Query: 337 --PLPPPPA 343
PL P PA
Sbjct: 310 GGPLSPTPA 318
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 40/217 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G Q K E+ +
Sbjct: 75 TLNGRKIFDTEIRVNWAYQGQ------------------------QNK------EDTTGH 104
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 105 YHVFVGDLSPEVNDEILGKAFSAF--GTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 162
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPA 343
I N L + I+ +W ++ T G+ + PP P
Sbjct: 163 IATMNGEWLGSRAIRVNWANQKT-QGSVAVASPPRPG 198
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 229 TVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 286
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 287 MVHGRPIKCSWG 298
>gi|299755830|ref|XP_001828914.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|298411401|gb|EAU92921.2| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 433
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 129/288 (44%), Positives = 176/288 (61%), Gaps = 18/288 (6%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTSGH++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK------GATSGD 217
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA +
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGAR 197
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ + V G ++ + AP N TTVYVGNL T DL F +
Sbjct: 198 PSAGGGAPAPVNFQGGPLTYEQVLAQTAPYN----TTVYVGNLVPYTTQADLIPLFQS-- 251
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+G + ++R+Q D+GF FV+ TH AA AI +++ G+PIKCSWG
Sbjct: 252 IGYLSEIRMQADRGFAFVKLDTHEHAAQAIVQLQGQMVHGRPIKCSWG 299
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 88/211 (41%), Gaps = 43/211 (20%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTSGHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDT----------------------------- 129
AI T+NG + + I+VNWA +Q
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGGAPGGGARPSAGGGAPAPVNFQGGPLTYEQVL 221
Query: 130 --SGHFN--VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
+ +N V+VG+L P T A L F S+ R+ D RGF FV E
Sbjct: 222 AQTAPYNTTVYVGNLVPYTTQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 275
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
A AI L G+ + R I+C+W A G
Sbjct: 276 HAAQAIVQLQGQMVHGRPIKCSWGKDRADGG 306
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + E+ +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQG------------------------------QQNKEDTSGH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDEVLGKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKT 187
>gi|409051430|gb|EKM60906.1| hypothetical protein PHACADRAFT_247129 [Phanerochaete carnosa
HHB-10118-sp]
Length = 425
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 127/291 (43%), Positives = 180/291 (61%), Gaps = 17/291 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 15 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 74
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDT+GH++VFVGDLSPEV D L F+ F T SDAR
Sbjct: 75 LNGRKIFDTEIRVNWAYQGQQNKEDTTGHYHVFVGDLSPEVNDEVLAKAFAAFGTLSDAR 134
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + ++ +
Sbjct: 135 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPPRAGN 194
Query: 224 SKSVVELTNGIS--------DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFH 274
+ + +G G S E + P Y +TVYVGNL T DL F
Sbjct: 195 GGNGSDGGHGGGGAPAPMNFQGGPLSYESVVQQTPAYNSTVYVGNLVPYATQADLIPLFQ 254
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 255 S--IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 303
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 14 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 73
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G +++ ED +
Sbjct: 74 TLNGRKIFDTEIRVNWAYQG--------------------------QQNKED----TTGH 103
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 104 YHVFVGDLSPEVNDEVLAKAFAAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 161
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 162 IATMNGEWLGSRAIRVNWANQKT 184
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 234 TVYVGNLVPYATQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 109 HIFGQPIKVNW 119
+ G+PIK +W
Sbjct: 292 MVHGRPIKCSW 302
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-------GFGFVRY 297
+P P+ +YVGNLS VT L F G ++ V++ D+ +GFV Y
Sbjct: 5 SPAEAPRRAHLYVGNLSPRVTEYMLTEIF--AVAGPVQHVKIIPDRNYQHGGLNYGFVEY 62
Query: 298 STHPEAALAIQMGNARILCGKPIKCSW 324
A A+Q N R + I+ +W
Sbjct: 63 MDMRAAETALQTLNGRKIFDTEIRVNW 89
>gi|392597176|gb|EIW86498.1| hypothetical protein CONPUDRAFT_78829 [Coniophora puteana
RWD-64-598 SS2]
Length = 439
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 133/309 (43%), Positives = 182/309 (58%), Gaps = 17/309 (5%)
Query: 36 GNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFV 90
GN+ +A +YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV
Sbjct: 5 GNMGGPAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFV 64
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATL 149
+Y D R+A A+ TLNGR IF I+VNWAY Q +EDTSGHF+VFVGDLSPEV D L
Sbjct: 65 EYLDMRAAETALQTLNGRKIFDTEIRVNWAYQGQQNKEDTSGHFHVFVGDLSPEVNDEVL 124
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F+ F T SDARVMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA
Sbjct: 125 AKAFAAFGTMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA 184
Query: 210 AKGATSGDEKQSSDSKSVVELTNGIS--------DGQEKSNEDAPENNPQY-TTVYVGNL 260
+ + G+ G S E + P Y +TVYVGNL
Sbjct: 185 NQKTQGAPAVGAGAPAPRPGGGGGVGTAPAPINFQGGPLSYESVVQQTPSYNSTVYVGNL 244
Query: 261 SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
T DL F + +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PI
Sbjct: 245 VPYCTQADLIPLFQS--IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPI 302
Query: 321 KCSWGSKPT 329
KCSWG T
Sbjct: 303 KCSWGKDRT 311
>gi|449550716|gb|EMD41680.1| hypothetical protein CERSUDRAFT_110250 [Ceriporiopsis subvermispora
B]
Length = 448
Score = 247 bits (630), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 134/291 (46%), Positives = 177/291 (60%), Gaps = 18/291 (6%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 16 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 75
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTS HF+VFVGDLSPEV D L FS F T SDAR
Sbjct: 76 LNGRKIFDTEIRVNWAYQGQQNKEDTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDAR 135
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK--------GATS 215
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + G S
Sbjct: 136 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVRS 195
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFH 274
G S S G S E + P Y TTVYVGNL T DL F
Sbjct: 196 GSMSAGSGGGGGAPAPMNFSGG-PLSYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQ 254
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 255 S--IGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 303
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 89/217 (41%), Gaps = 49/217 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 100 DTSNHFHVFVGDLSPEVNDEVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 159
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------------------------- 120
AI T+NG + + I+VNWA
Sbjct: 160 EQAIATMNGEWLGSRAIRVNWANQKTQGAPPVGVRSGSMSAGSGGGGGAPAPMNFSGGPL 219
Query: 121 -YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
Y S ++ + + V+VG+L P T A L F S+ R+ D RGF FV
Sbjct: 220 SYESVVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSIGYLSEIRMQAD------RGFAFV 273
Query: 180 SFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E A AI L G+ + R I+C+W A G
Sbjct: 274 KLDTHEHAAMAIVQLQGQMVHGRPIKCSWGKDRADGG 310
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 15 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 74
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + E+ +
Sbjct: 75 TLNGRKIFDTEIRVNWAYQG------------------------------QQNKEDTSNH 104
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 105 FHVFVGDLSPEVNDEVLAKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 162
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 163 IATMNGEWLGSRAIRVNWANQKT 185
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 234 TVYVGNLVPYCTQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 291
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSP 142
+ G+PIK +W ++ G + G LSP
Sbjct: 292 MVHGRPIKCSWG-----KDRADGGVALPAGSLSP 320
>gi|393248198|gb|EJD55705.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 426
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 141/332 (42%), Positives = 184/332 (55%), Gaps = 37/332 (11%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 8 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 67
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY SQ +EDTS HF+VFVGDLSPEV+D L FS F T SDAR
Sbjct: 68 LNGRKIFDTEIRVNWAYQGSQNKEDTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDAR 127
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + G
Sbjct: 128 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTMGGAPVTGGG 187
Query: 224 SKSVVEL---------------------------TNGISDGQEKSNEDAPENNPQY-TTV 255
+ + N G S E P Y TTV
Sbjct: 188 GPPMGGMGGGMGGGVGGIRMGGPPMAGAGGAPASINFAPGGGPLSFEQVVAQTPAYNTTV 247
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL T DL F +G I ++R+Q D+GF FV+ TH AALAI +++
Sbjct: 248 YVGNLVPYTTQADLIPLFQG--IGYISEIRMQADRGFAFVKLDTHEHAALAIVQLQGQLV 305
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLP 347
G+PIKCSWG K G + T P PA P
Sbjct: 306 HGRPIKCSWG-KDRASGETGTMSPTSPAGVTP 336
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS-RGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 7 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 66
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G+ Q K E+ +
Sbjct: 67 TLNGRKIFDTEIRVNWAYQGS------------------------QNK------EDTSNH 96
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV+ L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 97 FHVFVGDLSPEVSDEVLGKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 154
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 155 IATMNGEWLGSRAIRVNWANQKT 177
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V++ +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 92 DTSNHFHVFVGDLSPEVSDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 151
Query: 99 ALAIVTLNGRHIFGQPIKVNWA 120
AI T+NG + + I+VNWA
Sbjct: 152 EQAIATMNGEWLGSRAIRVNWA 173
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F G + ++ + D+ + FV AALAIV L G+
Sbjct: 246 TVYVGNLVPYTTQADLIPLFQGIGYISEIRM-QADRG-FAFVKLDTHEHAALAIVQLQGQ 303
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 304 LVHGRPIKCSWG 315
>gi|406861752|gb|EKD14805.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 495
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/380 (39%), Positives = 217/380 (57%), Gaps = 29/380 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPAAAERAMQT 148
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 149 LNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 208
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR ++DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 209 RVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 268
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T+G+ +S + + P + TTVYVGNL+ T DL
Sbjct: 269 MSAMGMTSTTPFGHHHFPTHGV-----QSYDMIVQQTPAWQTTVYVGNLTPYTTQNDLIP 323
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP- 330
F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P
Sbjct: 324 LFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPG 381
Query: 331 -PGTSSTPLPPPPAPHLPGFSATDLAAYERQIAL-SKIAGAQA---LMHPQAQHALKLGM 385
PG + P PA PG T + + + L + G Q+ + Q+Q + G
Sbjct: 382 QPGADGSQAPWSPAVQTPGGFQTPTSFFPQYGGLPQQPQGPQSAGPMPSQQSQFPAQGGY 441
Query: 386 GAAGASQAIYDSSGFQNVAT 405
GA S A Y++ N A+
Sbjct: 442 GAPAQSPAQYNNPQMYNPAS 461
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 96/229 (41%), Gaps = 50/229 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R+ A
Sbjct: 174 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDA 233
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS-----SQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA SQ++ S HF
Sbjct: 234 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTSTTPFGHHHFPTHGVQSY 293
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T L F F + R D RGF FV
Sbjct: 294 DMIVQQTPAWQTTVYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 347
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQSSDSKSV 227
E+A AI L+G + R ++C+W A G D Q+ S +V
Sbjct: 348 DTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPGQPGADGSQAPWSPAV 396
>gi|392571669|gb|EIW64841.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 437
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 138/322 (42%), Positives = 183/322 (56%), Gaps = 35/322 (10%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTS H++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRKIFDTEIRVNWAYQGQQNKEDTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA +
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSPGGPGGP 197
Query: 224 SKSVVELTNGISDGQEKSNE------DAPEN--------------NPQY-TTVYVGNLSS 262
G G +SN AP N P Y TTVYVGNL
Sbjct: 198 GGPGGPGGPGGPGGPPRSNSMGGGGAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVGNLVP 257
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
T DL F + +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKC
Sbjct: 258 YATQADLIPLFQS--IGYLSEIRMQSDRGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKC 315
Query: 323 SWGSK-----PTPPGTSSTPLP 339
SWG P PG S +P P
Sbjct: 316 SWGKDRADGAPISPG-SMSPAP 336
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G Q K E+ +
Sbjct: 77 TLNGRKIFDTEIRVNWAYQGQ------------------------QNK------EDTSNH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDEVLGKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKT 187
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 62/223 (27%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTSNHYHVFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ-------------------------REDTSG-- 131
AI T+NG + + I+VNWA +Q R ++ G
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGSPGGPGGPGGPGGPGGPGGPGGPPRSNSMGGG 221
Query: 132 -------------------------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
+ V+VG+L P T A L F S+ R+
Sbjct: 222 GAPAPMNFTGGPLSYEGVVTQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQS 281
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
D RGF FV E A AI L G+ + R I+C+W
Sbjct: 282 D------RGFAFVKLDTHEHAAMAIVQLQGQLVHGRPIKCSWG 318
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + + FV AA+AIV L G+
Sbjct: 249 TVYVGNLVPYATQADLIPLFQSIGYLSEIRM--QSDRGFAFVKLDTHEHAAMAIVQLQGQ 306
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
+ G+PIK +W +D + + G +SP A + A ++V P
Sbjct: 307 LVHGRPIKCSWG------KDRADGAPISPGSMSP----APVAAPYNVVP 345
>gi|401887565|gb|EJT51549.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 2479]
gi|406699766|gb|EKD02963.1| non-translatable mRNA -binding protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 381
Score = 243 bits (621), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 131/283 (46%), Positives = 174/283 (61%), Gaps = 18/283 (6%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAALAIVT 104
+Y+GN+ P+VT+ +L E+FS GP+ K+I+ +YGFV+Y D RSA A+ T
Sbjct: 15 LYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTDMRSAEQALTT 74
Query: 105 LNGRHIFGQPIKVNWAY-ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY REDT HF+VFVGDLSPEV D L F+ F + S+AR
Sbjct: 75 LNGRKIFDSEIRVNWAYQGQGNREDTQHHFHVFVGDLSPEVNDDILGKAFAKFASLSEAR 134
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF+SFR++ DA+ AI +NG+WLG+R IR NWA + +G S
Sbjct: 135 VMWDMNSGKSRGYGFLSFRDKADAEQAIATMNGEWLGSRAIRVNWANQKTQTG----GSR 190
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
S + + NG + E P Y TTVYVGNL T DL F G I
Sbjct: 191 SLGLGQGFNG-----PLTFEQVAAQTPDYNTTVYVGNLIPYTTQADLIPLFQ--NYGYIV 243
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
++R+Q D+GF FV+ TH AAL+I +++ G+PIKCSWG
Sbjct: 244 EIRMQADRGFAFVKLDTHANAALSITSLQNQLVHGRPIKCSWG 286
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 39/210 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
++++G++SP VTD L FSV A+++ D+ +GFV + + A+ A+
Sbjct: 14 HLYIGNMSPRVTDQMLAEIFSVAGPVVSAKIIQDRNFHHGGYNYGFVEYTDMRSAEQALT 73
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + ++ Q +
Sbjct: 74 TLNGRKIFDSEIRVNWAYQGQGNREDTQ------------------------------HH 103
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F ++ + RV D +G+GF+ + +A A
Sbjct: 104 FHVFVGDLSPEVNDDILGKAFAKFA--SLSEARVMWDMNSGKSRGYGFLSFRDKADAEQA 161
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSST 336
I N L + I+ +W ++ T G S +
Sbjct: 162 IATMNGEWLGSRAIRVNWANQKTQTGGSRS 191
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F + G + ++ + D+ + FV +AAL+I +L +
Sbjct: 217 TVYVGNLIPYTTQADLIPLFQNYGYIVEIRM-QADR-GFAFVKLDTHANAALSITSLQNQ 274
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 275 LVHGRPIKCSWG 286
>gi|443924183|gb|ELU43247.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 498
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 188/329 (57%), Gaps = 35/329 (10%)
Query: 42 FDASTCRS--------VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYG 88
STC S +YVGN+ P+VT +L E+F+ GP++ K+I + +YG
Sbjct: 32 LSVSTCSSAEAPRRAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGQNYG 91
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDA 147
FV+Y D R+A A+ TLNGR IF I+VNWAY +Q +EDTS H++VFVGDLSPEV D
Sbjct: 92 FVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTQNKEDTSNHYHVFVGDLSPEVNDE 151
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ F + SDARVMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR N
Sbjct: 152 VLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVN 211
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGIS-------------DGQEKSNEDAPENNPQY-T 253
WA + SG + + G+ G S E P Y T
Sbjct: 212 WANQKTQSGGGGGMPPGMPSMGDSMGMGGGAMGGVPAPMNFQGGPLSYESVVSQTPAYNT 271
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR 313
TVYVGNL T DL F + +G + ++R+Q D+GF FV+ TH AA+AI +
Sbjct: 272 TVYVGNLVPYCTQADLIPLFQS--IGYLSEIRMQADRGFAFVKLDTHENAAMAIVQLQGQ 329
Query: 314 ILCGKPIKCSWGSKPT-----PPGTSSTP 337
++ G+PIKCSWG + PG+ TP
Sbjct: 330 LVHGRPIKCSWGKDRSAADTGAPGSMITP 358
>gi|390604168|gb|EIN13559.1| hypothetical protein PUNSTDRAFT_117298 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 425
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/301 (43%), Positives = 181/301 (60%), Gaps = 16/301 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 19 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQT 78
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY +Q +EDTS H++VFVGDLSPEV D L FS F + SDAR
Sbjct: 79 LNGRKIFDTEIRVNWAYQGNQNKEDTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDAR 138
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSS 222
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA K + +
Sbjct: 139 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAMGGGAPA 198
Query: 223 DSKSVVELTNGIS------DGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHA 275
+ + G S G S E P Y +TVYVGNL T DL F +
Sbjct: 199 PAAARPSPGLGGSPAPMNFQGGPISYESVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQS 258
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
+G ++++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG G
Sbjct: 259 --IGYLQEIRMQADRGFAFVKLDTHEHAAMAIIQLQGQMVHGRPIKCSWGKDRADGGAVG 316
Query: 336 T 336
T
Sbjct: 317 T 317
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 88/217 (40%), Gaps = 49/217 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +LQ+ FS+ G L +++ S YGF+ + D+ A
Sbjct: 103 DTSNHYHVFVGDLSPEVNDEVLQKAFSAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDA 162
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------------------------- 120
AI T+NG + + I+VNWA
Sbjct: 163 EQAIATMNGEWLGSRAIRVNWANQKTQGAMGGGAPAPAAARPSPGLGGSPAPMNFQGGPI 222
Query: 121 -YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
Y S + + + V+VG+L P T A L F + R+ D RGF FV
Sbjct: 223 SYESVVSQTPAYNSTVYVGNLVPYCTQADLIPLFQSIGYLQEIRMQAD------RGFAFV 276
Query: 180 SFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E A AI L G+ + R I+C+W A G
Sbjct: 277 KLDTHEHAAMAIIQLQGQMVHGRPIKCSWGKDRADGG 313
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 92/203 (45%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 18 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYIDMRAAETALQ 77
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G Q K E+ +
Sbjct: 78 TLNGRKIFDTEIRVNWAYQG------------------------NQNK------EDTSNH 107
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ D RV D +G+GF+ + +A A
Sbjct: 108 YHVFVGDLSPEVNDEVLQKAFSAF--GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 165
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 166 IATMNGEWLGSRAIRVNWANQKT 188
>gi|331230317|ref|XP_003327823.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168138|ref|XP_003889766.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|403168140|ref|XP_003889767.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306813|gb|EFP83404.1| hypothetical protein PGTG_08590 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167366|gb|EHS63397.1| hypothetical protein, variant 2 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167367|gb|EHS63398.1| hypothetical protein, variant 1 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 471
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 135/310 (43%), Positives = 182/310 (58%), Gaps = 24/310 (7%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +LQE+FS GP++G K+I + +YGFV+Y++ RSA A+ T
Sbjct: 111 LYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 170
Query: 105 LNGRHIFGQPIKVNWAYASSQ---REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
L GR IF I+VNWAY +SQ +ED S H++VFVGDLSPEV D L F+ F + SD
Sbjct: 171 LGGRKIFDTEIRVNWAYQNSQSNVKEDLSTHYHVFVGDLSPEVNDEVLAKAFAAFGSLSD 230
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK-----GATSG 216
ARVMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA + AT G
Sbjct: 231 ARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQGMAATPG 290
Query: 217 DE-KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
S + G + E + AP N TTVY GNL T DL F
Sbjct: 291 AVIAPGMGSGGMNRGGFGGATNYEAVVQQAPAYN---TTVYTGNLVPYSTQADLIPLFQG 347
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG-----SKPTP 330
G I ++R+Q D+GF FV+ TH AA+AI + G+P+KCSWG + P
Sbjct: 348 F--GYIVEIRMQADRGFAFVKMDTHENAAMAIVNLTGTPVHGRPLKCSWGKDRASADPNS 405
Query: 331 PGTSSTPLPP 340
S P+ P
Sbjct: 406 APASGMPMAP 415
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 51/222 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D ST V+VG++ P+V + +L + F++ G L +++ S YGF+ + D+ A
Sbjct: 197 DLSTHYHVFVGDLSPEVNDEVLAKAFAAFGSLSDARVMWDMNSGKSRGYGFLAFRDKTDA 256
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------------------------------YASS 124
AI T+NG + + I+VNWA Y +
Sbjct: 257 EQAIATMNGEWLGSRAIRVNWANQKNQGMAATPGAVIAPGMGSGGMNRGGFGGATNYEAV 316
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
++ + + V+ G+L P T A L F F + R+ D RGF FV
Sbjct: 317 VQQAPAYNTTVYTGNLVPYSTQADLIPLFQGFGYIVEIRMQAD------RGFAFVKMDTH 370
Query: 185 EDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
E+A AI +L G + R ++C+W G ++ S+D S
Sbjct: 371 ENAAMAIVNLTGTPVHGRPLKCSW-------GKDRASADPNS 405
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 38/211 (18%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L FSV +++ D+ +GFV + A++A+
Sbjct: 110 HLYVGNLSPRVTEYMLQEIFSVAGPVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQ 169
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
L G+ + + +IR NWA Q+S S +L+ +
Sbjct: 170 TLGGRKIFDTEIRVNWA---------YQNSQSNVKEDLST-------------------H 201
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ D RV D +G+GF+ + +A A
Sbjct: 202 YHVFVGDLSPEVNDEVLAKAFAAF--GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 259
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
I N L + I+ +W ++ G ++TP
Sbjct: 260 IATMNGEWLGSRAIRVNWANQKN-QGMAATP 289
>gi|302694831|ref|XP_003037094.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
gi|300110791|gb|EFJ02192.1| hypothetical protein SCHCODRAFT_84062 [Schizophyllum commune H4-8]
Length = 435
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 130/300 (43%), Positives = 177/300 (59%), Gaps = 26/300 (8%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D R+A A+ T
Sbjct: 18 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQT 77
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDT+ H++VFVGDLSPEV D L FS F T SDAR
Sbjct: 78 LNGRRIFDTEIRVNWAYQGQQNKEDTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQ 220
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA +G+ G
Sbjct: 138 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGSLGGGGGG 197
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPEN--------------NPQY-TTVYVGNLSSEVT 265
S + ++ AP N P Y TTVYVGNL T
Sbjct: 198 GGPVGSPIGGPPAMARPMGAGGAPAPMNLAGGPLSYEQVLTQTPAYNTTVYVGNLVPYCT 257
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
DL F +G + ++R+Q D+GF FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 258 QADLIPLFQ--TIGYLSEIRMQADRGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 315
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 17 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYLDMRAAETALQ 76
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + E+ +
Sbjct: 77 TLNGRRIFDTEIRVNWAYQG------------------------------QQNKEDTTNH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A GT+ D RV D +G+GF+ + +A A
Sbjct: 107 YHVFVGDLSPEVNDDVLAKAFSAF--GTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 165 IATMNGEWLGSRAIRVNWANQKT 187
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 85/220 (38%), Gaps = 59/220 (26%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D + V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 102 DTTNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ------------------------REDTSGH-- 132
AI T+NG + + I+VNWA +Q R +G
Sbjct: 162 EQAIATMNGEWLGSRAIRVNWANQKTQGSLGGGGGGGGPVGSPIGGPPAMARPMGAGGAP 221
Query: 133 --FNVFVGDLS---------------------PEVTDATLFACFSVFPTCSDARVMWDQK 169
N+ G LS P T A L F S+ R+ D
Sbjct: 222 APMNLAGGPLSYEQVLTQTPAYNTTVYVGNLVPYCTQADLIPLFQTIGYLSEIRMQAD-- 279
Query: 170 TGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
RGF FV E A AI L G+ + R I+C+W
Sbjct: 280 ----RGFAFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 315
>gi|119495558|ref|XP_001264561.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
gi|119412723|gb|EAW22664.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Neosartorya fischeri NRRL 181]
Length = 477
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 196/329 (59%), Gaps = 35/329 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+G+ +S + + PQ+ TT YVGNL+ T D
Sbjct: 270 QQAMAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQND 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L FH G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 325 LVPLFHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG--------TSSTPLPPPPAPHLPGF 349
P G ++P PA + P +
Sbjct: 383 PPTGQFDNFSGQQPNSPFNSSPATYFPQY 411
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ ++G + + I+ NWA Q + GH +
Sbjct: 238 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|41581275|emb|CAE47924.1| oligouridylate binding protein, putative [Aspergillus fumigatus]
Length = 485
Score = 240 bits (613), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 132/304 (43%), Positives = 188/304 (61%), Gaps = 27/304 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+G+ +S + + PQ+ TT YVGNL+ T D
Sbjct: 270 QQAMAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQND 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L FH G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 325 LVPLFHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG 332
P G
Sbjct: 383 PPTG 386
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 178 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ ++G + + I+ NWA Q + GH +
Sbjct: 238 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|440635298|gb|ELR05217.1| hypothetical protein GMDG_01655 [Geomyces destructans 20631-21]
Length = 503
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/312 (43%), Positives = 191/312 (61%), Gaps = 30/312 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS-------SYGFVDYFDRRSAAL 100
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A
Sbjct: 89 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIP-DKNVGASKGFNYGFVEYDDPGAAER 147
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ TLNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L F F +
Sbjct: 148 AMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFCAFGS 207
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGD 217
S+ARVMWD KTGRSRG+GFV+FR ++DA+ A++ ++G+WLG+R IRCNWA KG S
Sbjct: 208 VSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 267
Query: 218 EKQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSV 267
++QS S + T+G+ +S + + PQ+ TTVYVGNL+ T
Sbjct: 268 QQQSMVSTGLTPTTPFGHHHFPTHGV-----QSYDMIVQQTPQWQTTVYVGNLTPYTTQN 322
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DL F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG
Sbjct: 323 DLVPLFQNF--GYVVETRFQSDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKD 380
Query: 328 --PTPPGTSSTP 337
P+ PG TP
Sbjct: 381 KAPSQPGFEGTP 392
>gi|328863696|gb|EGG12795.1| hypothetical protein MELLADRAFT_73862 [Melampsora larici-populina
98AG31]
Length = 477
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/297 (44%), Positives = 177/297 (59%), Gaps = 23/297 (7%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +LQE+FS G ++G K+I + +YGFV+Y++ RSA A+ T
Sbjct: 110 LYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQT 169
Query: 105 LNGRHIFGQPIKVNWAYASSQ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
L GR IF I+VNWAY +SQ +ED SGHF+VFVGDLSPEV D L F+ F + S
Sbjct: 170 LGGRKIFDNEIRVNWAYQNSQQNAVKEDLSGHFHVFVGDLSPEVNDDVLAKAFAAFGSLS 229
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---------AK 211
DARVMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA A
Sbjct: 230 DARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKNQGMPGAP 289
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSN--EDAPENNPQY-TTVYVGNLSSEVTSVD 268
G+ G + + G G +N E + P Y +TVY GNL T D
Sbjct: 290 GSAMGGGNMGGMNGGMNRAGGGGGGGGFGANSYEAVVQQAPAYNSTVYTGNLVPYCTQAD 349
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
L F G I ++R+Q D+GF FV+ TH AA+AI + G+P+KCSWG
Sbjct: 350 LIPLFQGF--GYIVEIRMQADRGFAFVKLDTHENAAMAIVNLTGTPVHGRPLKCSWG 404
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR-SRGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L FSV + +++ D+ +GFV + A++A+
Sbjct: 109 HLYVGNLSPRVTEYMLQEIFSVAGSVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQ 168
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
L G+ + + +IR NWA Q+S +V E +G +
Sbjct: 169 TLGGRKIFDNEIRVNWA---------YQNSQQNAVKEDLSG------------------H 201
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ D RV D +G+GF+ + +A A
Sbjct: 202 FHVFVGDLSPEVNDDVLAKAFAAF--GSLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 259
Query: 307 IQMGNARILCGKPIKCSWGSK-----PTPPGTS 334
I N L + I+ +W ++ P PG++
Sbjct: 260 IATMNGEWLGSRAIRVNWANQKNQGMPGAPGSA 292
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY GN+ P T A L +F G + ++ + D+ + FV +AA+AIV L G
Sbjct: 335 TVYTGNLVPYCTQADLIPLFQGFGYIVEIRM-QADR-GFAFVKLDTHENAAMAIVNLTGT 392
Query: 109 HIFGQPIKVNWA 120
+ G+P+K +W
Sbjct: 393 PVHGRPLKCSWG 404
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
+++G + ++ +VV T + G + SN + +YVGNLS VT L
Sbjct: 70 SSTGPQGAYGNNNAVVPTTG--APGAQPSNSYTGHPEAKRAHLYVGNLSPRVTEYMLQEI 127
Query: 273 FHALCVGTIEDVRVQRDKGF-------GFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
F G+++ V++ D+ F GFV Y A A+Q R + I+ +W
Sbjct: 128 FS--VAGSVQGVKIIPDRNFQHGGLNYGFVEYYEMRSAETALQTLGGRKIFDNEIRVNW 184
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 131/299 (43%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIP-DKNFQSKGYNYGFVEYDDPGAAERA 139
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + Q I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F T
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTSAKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 199
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GF +FR++ +A+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 200 SEARVMWDMKTGRSRGYGFAAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 259
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + T + +S E + PQ+ TTVYVGNL+ T DL F
Sbjct: 260 QQAMAQMGMTPTTPYGHHQFPTQGSQSYEMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLF 319
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF F++ TH AA AI + + G+P+KCSWG P G
Sbjct: 320 QNF--GYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPTG 376
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGF + DR A
Sbjct: 168 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFAAFRDRGEA 227
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHF---------- 133
A+ +++G + + I+ NWA Q + GH
Sbjct: 228 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHQFPTQGSQSY 287
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T L F F ++ R D RGF F+
Sbjct: 288 EMIVQQTPQWQTTVYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKM 341
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A +AI L+G + R ++C+W
Sbjct: 342 DTHENAANAICQLSGYQVNGRPLKCSWG 369
>gi|449302198|gb|EMC98207.1| hypothetical protein BAUCODRAFT_416441 [Baudoinia compniacensis
UAMH 10762]
Length = 479
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 191/331 (57%), Gaps = 17/331 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D + A A
Sbjct: 82 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIP-DKNFQSKGYNYGFVEYDDPQCAERA 140
Query: 102 IVTLNGRHIFGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + Q I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F T
Sbjct: 141 MQTLNGRRVHQQEIRVNWAYQSNTISKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 200
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFVSFR++ DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 201 SEARVMWDMKTGRSRGYGFVSFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSYSQ 260
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
Q+ + T + +S E + PQ+ TT YVGNL+ T DL F
Sbjct: 261 AQAMVQMGMTPTTPYGHHTFPTQGAQSFEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLF 320
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
G + + R D+GF FV+ TH AA AI + + G+P+KCSWG P G
Sbjct: 321 QNF--GYVTETRFHSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTGQ 378
Query: 334 SSTPLPPPPAPHLPGFSATDLAAYERQIALS 364
P PP P T Y + +S
Sbjct: 379 FDGYSPAPPQSAFPPTPQTYFPQYGQPNPMS 409
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 169 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVSFRDRGDA 228
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH
Sbjct: 229 EKALSSMDGEWLGSRAIRCNWANQKGQPSYSQAQAMVQMGMTPTTPYGHHTFPTQGAQSF 288
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++ R D RGF FV
Sbjct: 289 EMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFHSD------RGFAFVKM 342
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A +AI L+G + R ++C+W +G
Sbjct: 343 DTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTG 377
>gi|398407815|ref|XP_003855373.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
gi|339475257|gb|EGP90349.1| hypothetical protein MYCGRDRAFT_35430 [Zymoseptoria tritici IPO323]
Length = 401
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 131/300 (43%), Positives = 184/300 (61%), Gaps = 18/300 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 69 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIP-DKNFQSKGFNYGFVEYDDPGAAERA 127
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + Q I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F T
Sbjct: 128 MQTLNGRRVHQQEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 187
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 188 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 247
Query: 219 KQSSDSKSVVELT-----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRH 272
+Q+ + T + +S E + PQ+ TT YVGNL+ T DL
Sbjct: 248 QQAMVQMGMTPTTPYGGHHSFPTQGAQSYEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPL 307
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
F G + + R Q D+GF F++ TH AA AI + + G+P+KCSWG P G
Sbjct: 308 FQNF--GYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPTG 365
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 88/216 (40%), Gaps = 48/216 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 156 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAFRDRADA 215
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDT----------------SGHFNV------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 216 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMVQMGMTPTTPYGGHHSFPTQGAQS 275
Query: 136 ---------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
+VG+L+P T L F F ++ R D RGF F+
Sbjct: 276 YEMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIK 329
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A +AI L+G + R ++C+W +G
Sbjct: 330 MDTHENAANAICQLSGYQVNGRPLKCSWGKDRPPTG 365
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 132/322 (40%), Positives = 188/322 (58%), Gaps = 33/322 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I S +YGF++Y D +A A+ T
Sbjct: 86 RALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAERAMQT 145
Query: 105 LNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR I I+VNWAY S+Q +EDT+ HF++FVGDLS EV D L FS F + S+A
Sbjct: 146 LNGRRIHQAEIRVNWAYQSNQSSKEDTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEA 205
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 206 RVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 259
Query: 223 DSKSVVELTNGISDGQEKSNEDAP-----------ENNPQY-TTVYVGNLSSEVTSVDLH 270
S+ G++ + + P + PQ+ TT YVGNL+ T DL
Sbjct: 260 ISQQAAMAAMGMTPTTPYGHHNFPTHGVQSYDMIVQQTPQWQTTCYVGNLTPYTTQNDLV 319
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P
Sbjct: 320 PLFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPP 377
Query: 331 --------PGTSSTPLPPPPAP 344
P +TP PP P
Sbjct: 378 TGQFDAYSPQQPNTPQYPPQTP 399
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D + ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 171 DTTNHFHIFVGDLSNEVNDEVLMQAFSTFGSVSEARVMWDMKTGRSRGYGFVAFRDRADA 230
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH N
Sbjct: 231 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQAAMAAMGMTPTTPYGHHNFPTHGVQSY 290
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 291 DMIVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 344
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI L+G + R ++C+W
Sbjct: 345 DTHENAAMAICQLSGYNVNGRPLKCSWG 372
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 180/303 (59%), Gaps = 20/303 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----------YGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I +S YGFV+Y D +
Sbjct: 84 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 143
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A + TLNGR I I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS
Sbjct: 144 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 203
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGAT 214
F S+ARVMWD KTGRSRG+GFV+FR++ DA+ A+N ++G+WLG+R IRCNWA KG
Sbjct: 204 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKGQP 263
Query: 215 SGDEKQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDL 269
S ++Q+ S + T + +S + PQ+ TT YVGNL+ + DL
Sbjct: 264 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADL 323
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 324 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRP 381
Query: 330 PPG 332
P G
Sbjct: 382 PTG 384
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ GP+ +++ K+ YGFV + DR A
Sbjct: 176 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 235
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 236 ERALNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSY 295
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + A L F F ++ R D RGF F+
Sbjct: 296 DMVVAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFAFIKM 349
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 350 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 384
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 129/303 (42%), Positives = 180/303 (59%), Gaps = 20/303 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----------YGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I +S YGFV+Y D +
Sbjct: 52 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 111
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A + TLNGR I I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS
Sbjct: 112 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 171
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGAT 214
F S+ARVMWD KTGRSRG+GFV+FR++ DA+ A+N ++G+WLG+R IRCNWA KG
Sbjct: 172 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALNSMDGEWLGSRAIRCNWANQKGQP 231
Query: 215 SGDEKQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDL 269
S ++Q+ S + T + +S + PQ+ TT YVGNL+ + DL
Sbjct: 232 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQADL 291
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 292 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRP 349
Query: 330 PPG 332
P G
Sbjct: 350 PTG 352
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ GP+ +++ K+ YGFV + DR A
Sbjct: 144 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 203
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 204 ERALNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSY 263
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + A L F F ++ R D RGF F+
Sbjct: 264 DMVVAQTPQWQTTCYVGNLTPYTSQADLVPLFQNFGYVTETRFQSD------RGFAFIKM 317
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 318 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 352
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 138/344 (40%), Positives = 197/344 (57%), Gaps = 27/344 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 89 RALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAERAMQT 148
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 149 LNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 208
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GF +FR ++DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 209 RVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 268
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T+G+ +S + + PQ+ TT YVGNL+ T DL
Sbjct: 269 MSAMGMTPTTPFGHHHFPTHGV-----QSYDMIVQQTPQWQTTCYVGNLTPYTTQQDLVP 323
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF FV+ +H AALAI + + G+P+KCSWG P
Sbjct: 324 LFQNF--GYVVETRFQADRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWGKDKAPT 381
Query: 332 GT----SSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQA 371
S P P GF T A + + + AG Q+
Sbjct: 382 SAGFDGSQQSYSPQAGPTPGGFPGTPNAYFPQYGGMPPQAGPQS 425
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGF + +R+ A
Sbjct: 174 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDA 233
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS-----SQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA SQ++ S HF
Sbjct: 234 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSY 293
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 294 DMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQAD------RGFAFVKM 347
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI L+G + R ++C+W
Sbjct: 348 DSHENAALAICQLSGYNVNGRPLKCSWG 375
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 130/301 (43%), Positives = 184/301 (61%), Gaps = 23/301 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMQT 151
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 152 LNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 211
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 212 RVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 271
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T+G+ +S + + PQ+ TT YVGNL+ T DL
Sbjct: 272 MAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLVP 326
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P
Sbjct: 327 LFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPT 384
Query: 332 G 332
G
Sbjct: 385 G 385
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 38/206 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L P VT+ L F +++ D K + +GFV + + A+ A+ L
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNSKGLNYGFVEYDDPGAAERAMQTL 152
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +IR NWA + SN E+ +
Sbjct: 153 NGRRVHQSEIRVNWAYQ-----------------------------SNNANKEDTSNHFH 183
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQ 308
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A+
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALS 241
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTS 334
+ L + I+C+W ++ P S
Sbjct: 242 SMDGEWLGSRAIRCNWANQKGQPSIS 267
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 236
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 296
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 297 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 350
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 351 DTHENAAMAICQLNGYNVNGRPLKCSWG 378
>gi|134077058|emb|CAK39931.1| unnamed protein product [Aspergillus niger]
Length = 497
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 194/329 (58%), Gaps = 34/329 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I K+K +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 271 QQAMAAMGMTPTTAFGHHHFPTHGI-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQTD 325
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 326 LVPLFQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 383
Query: 329 TPPG--------TSSTPLPPPPAPHLPGF 349
P G S++ PAP+ P +
Sbjct: 384 PPTGQFDNFSGQQSNSGFNSTPAPYFPQY 412
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|350629665|gb|EHA18038.1| hypothetical protein ASPNIDRAFT_176547 [Aspergillus niger ATCC
1015]
Length = 496
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 194/329 (58%), Gaps = 35/329 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I DK+ +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIP-DKNFNSKGYNYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 270 QQAMAAMGMTPTTAFGHHHFPTHGI-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQTD 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 325 LVPLFQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG--------TSSTPLPPPPAPHLPGF 349
P G S++ PAP+ P +
Sbjct: 383 PPTGQFDNFSGQQSNSGFNSTPAPYFPQY 411
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA + SQ++ + HF
Sbjct: 238 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 297
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|225682885|gb|EEH21169.1| nucleolysin TIA-1 [Paracoccidioides brasiliensis Pb03]
Length = 471
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/296 (43%), Positives = 181/296 (61%), Gaps = 13/296 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMAT 159
Query: 105 LNGRHIFGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 160 LNGRRVHQSEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 219
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 220 RVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 279
Query: 222 SDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHAL 276
+ + T + +S + PQ+ TT YVGNL+ T DL F
Sbjct: 280 MAAMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF 339
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P G
Sbjct: 340 --GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 393
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L P VT+ L F +++ D K + +GFV + + A+ A+ L
Sbjct: 102 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNSKGLNYGFVEYDDPGAAERAMATL 160
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +IR NWA +SN + E+ +
Sbjct: 161 NGRRVHQSEIRVNWA-----------------------------YQSNSNNKEDTSNHFH 191
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQ 308
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A+
Sbjct: 192 IFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALS 249
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTS 334
+ L + I+C+W ++ P S
Sbjct: 250 SMDGEWLGSRAIRCNWANQKGQPSIS 275
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 185 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 244
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA + SQ++ + HF
Sbjct: 245 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 304
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 305 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 358
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI L+G + R ++C+W +G
Sbjct: 359 DTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 393
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/329 (41%), Positives = 194/329 (58%), Gaps = 34/329 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I K+K +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 271 QQAMAAMGMTPTTAFGHHHFPTHGI-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQTD 325
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 326 LVPLFQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 383
Query: 329 TPPG--------TSSTPLPPPPAPHLPGF 349
P G S++ PAP+ P +
Sbjct: 384 PPTGQFDNFSGQQSNSGFNSTPAPYFPQY 412
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|402218978|gb|EJT99053.1| hypothetical protein DACRYDRAFT_24132 [Dacryopinax sp. DJM-731 SS1]
Length = 474
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 136/328 (41%), Positives = 184/328 (56%), Gaps = 43/328 (13%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+YVGN+ P+VT +L E+F+ GP++ K+I + +YGFV+Y D RSA A+ T
Sbjct: 14 LYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQT 73
Query: 105 LNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LNGR IF I+VNWAY Q +EDTSGH++VFVGDLSPEV D L F+ FPT SDAR
Sbjct: 74 LNGRKIFDTEIRVNWAYQGQQNKEDTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDAR 133
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGA------- 213
VMWD +G+SRG+GF++FR++ DA+ AI +NG+WLG+R IR NWA +GA
Sbjct: 134 VMWDMNSGKSRGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPGNGGMP 193
Query: 214 ----------------TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY----- 252
G + S + + Q S + AP + Q
Sbjct: 194 GIGGGMGMGGGMPTGMPMGMPMGGMPAMSPMGAARPMGMPQPVSFQTAPVSYEQVLTQSP 253
Query: 253 ---TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
+TVYVGNL T DL F +G + ++R+Q D+GF FV+ TH AA AI
Sbjct: 254 ATNSTVYVGNLVPFATQADLIPLFQ--SIGYLSEIRMQADRGFAFVKLDTHENAATAIVS 311
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTP 337
+++ G+PIK SWG K G +TP
Sbjct: 312 LQGQMIHGRPIKVSWG-KDRNAGEGATP 338
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 39/203 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS-RGFGFVSFRNQEDAQSAIN 192
+++VG+LSP VT+ L F+V +++ D+ +GFV + + A++A+
Sbjct: 13 HLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYTDMRSAETALQ 72
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G +++ ED +
Sbjct: 73 TLNGRKIFDTEIRVNWAYQG--------------------------QQNKEDTSG----H 102
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A T+ D RV D +G+GF+ + +A A
Sbjct: 103 YHVFVGDLSPEVNDEVLAKAFAAFP--TMSDARVMWDMNSGKSRGYGFLAFRDKTDAEQA 160
Query: 307 IQMGNARILCGKPIKCSWGSKPT 329
I N L + I+ +W ++ T
Sbjct: 161 IATMNGEWLGSRAIRVNWANQKT 183
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
+T +VYVGN+ P T A L +F S G L ++ + D+ + FV +AA AIV+
Sbjct: 254 ATNSTVYVGNLVPFATQADLIPLFQSIGYLSEIRM-QADRG-FAFVKLDTHENAATAIVS 311
Query: 105 LNGRHIFGQPIKVNW 119
L G+ I G+PIKV+W
Sbjct: 312 LQGQMIHGRPIKVSW 326
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S V+VG++ P+V + +L + F++ + +++ S YGF+ + D+ A
Sbjct: 98 DTSGHYHVFVGDLSPEVNDEVLAKAFAAFPTMSDARVMWDMNSGKSRGYGFLAFRDKTDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ 125
AI T+NG + + I+VNWA +Q
Sbjct: 158 EQAIATMNGEWLGSRAIRVNWANQKTQ 184
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG+L P T A L F S+ R+ D RGF FV E+A +AI L
Sbjct: 259 VYVGNLVPFATQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHENAATAIVSL 312
Query: 195 NGKWLGNRQIRCNW-----AAKGATSGDEKQSSDSKSVVELTNG 233
G+ + R I+ +W A +GAT + S + V + G
Sbjct: 313 QGQMIHGRPIKVSWGKDRNAGEGATPQAASGGTGSPAAVAASPG 356
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-------GFGFVRY 297
+P P+ +YVGNLS VT L F G ++ V++ D+ +GFV Y
Sbjct: 4 SPAQAPRRAHLYVGNLSPRVTEYMLTEIF--AVAGPVQHVKIIPDRNYQHGGLNYGFVEY 61
Query: 298 STHPEAALAIQMGNARILCGKPIKCSW 324
+ A A+Q N R + I+ +W
Sbjct: 62 TDMRSAETALQTLNGRKIFDTEIRVNW 88
>gi|121701611|ref|XP_001269070.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
gi|119397213|gb|EAW07644.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus clavatus NRRL 1]
Length = 480
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 187/304 (61%), Gaps = 26/304 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I K+K +YGFV++ D +A A
Sbjct: 92 RALYVGGLDPRVTEDILKQIFETTGHVQSVKVIPDKNKFNSKGYNYGFVEFDDPGAAERA 151
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTSGHF++FVGDLS EV D L FS F +
Sbjct: 152 MQTLNGRRIHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSV 211
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ DA A+N ++G+WLG+R IRCNWA KG S +
Sbjct: 212 SEARVMWDMKTGRSRGYGFVAFRDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPSISQ 271
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+G+ +S + + PQ+ TT YVGNL+ D
Sbjct: 272 QQAMAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTAQND 326
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 327 LVPLFQNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 384
Query: 329 TPPG 332
P G
Sbjct: 385 PPTG 388
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 86/214 (40%), Gaps = 47/214 (21%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N + D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV +
Sbjct: 174 NTTSKEDTSGHFHIFVGDLSNEVNDEILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAF 233
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-- 135
DR A A+ +++G + + I+ NWA Q + GH +
Sbjct: 234 RDRGDADKALNSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPT 293
Query: 136 --------------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VG+L+P L F F + R+ D RG
Sbjct: 294 HGVQSYDMVVQQTPQWQTTCYVGNLTPYTAQNDLVPLFQNFGYVLETRLQAD------RG 347
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F+ E+A AI LNG + R ++C+W
Sbjct: 348 FAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWG 381
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/273 (45%), Positives = 167/273 (61%), Gaps = 14/273 (5%)
Query: 63 LLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKV 117
+L E+F+ GP++ K+I + +YGFV+Y D R+A A+ TLNGR IF I+V
Sbjct: 1 MLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIRV 60
Query: 118 NWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
NWAY Q +EDTS H++VFVGDLSPEV D L FS F T SDARVMWD +G+SRG+
Sbjct: 61 NWAYQGQQNKEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGY 120
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA---AKGATSGDEKQSSDSKSVVELTNG 233
GF++FR++ DA+ AI +NG+WLG+R IR NWA +GA ++ N
Sbjct: 121 GFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMN- 179
Query: 234 ISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGF 292
G S E + P Y TTVYVGNL T DL F + +G + ++R+Q D+GF
Sbjct: 180 -FQGGPLSYESVVQQTPAYNTTVYVGNLVPYATQADLIPLFQS--IGYLSEIRMQADRGF 236
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
FV+ TH AA+AI +++ G+PIKCSWG
Sbjct: 237 AFVKLDTHEHAAMAIVQLQGQMVHGRPIKCSWG 269
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 43/204 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S V+VG++ P+V + +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 72 DTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 131
Query: 99 ALAIVTLNGRHIFGQPIKVNWA---------------------------------YASSQ 125
AI T+NG + + I+VNWA Y S
Sbjct: 132 EQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYESVV 191
Query: 126 REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
++ + + V+VG+L P T A L F S+ R+ D RGF FV E
Sbjct: 192 QQTPAYNTTVYVGNLVPYATQADLIPLFQSIGYLSEIRMQAD------RGFAFVKLDTHE 245
Query: 186 DAQSAINDLNGKWLGNRQIRCNWA 209
A AI L G+ + R I+C+W
Sbjct: 246 HAAMAIVQLQGQMVHGRPIKCSWG 269
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F S G L ++ + D+ + FV AA+AIV L G+
Sbjct: 200 TVYVGNLVPYATQADLIPLFQSIGYLSEIRM-QADR-GFAFVKLDTHEHAAMAIVQLQGQ 257
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDA 147
+ G+PIK +W +D + G LSP T A
Sbjct: 258 MVHGRPIKCSWG------KDRDSGAALSSGSLSPTPTAA 290
>gi|452845910|gb|EME47843.1| hypothetical protein DOTSEDRAFT_167231 [Dothistroma septosporum
NZE10]
Length = 500
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/299 (43%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 83 RALYVGGLDPRVTEDVLKQIFETTGHVQNVKIIP-DKNFQSKGYNYGFVEYDDPGAAERA 141
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + Q I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F T
Sbjct: 142 MQTLNGRRVHQQEIRVNWAYQSNTNTKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTV 201
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV++R++ +A+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 202 SEARVMWDMKTGRSRGYGFVAYRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 261
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + T + +S E PQ+ TT YVGNL+ T DL F
Sbjct: 262 QQAMAQMGMTPTTPYGHHTFPTQGSQSYEMVVNQTPQWQTTCYVGNLTPYTTQNDLVPLF 321
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF FV+ TH AA AI + + G+P+KCSWG P G
Sbjct: 322 QNF--GYVTETRFQSDRGFAFVKMDTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTG 378
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV Y DR A
Sbjct: 170 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGTVSEARVMWDMKTGRSRGYGFVAYRDRGEA 229
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH
Sbjct: 230 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHTFPTQGSQSY 289
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++ R D RGF FV
Sbjct: 290 EMVVNQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFVKM 343
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A +AI L+G + R ++C+W +G
Sbjct: 344 DTHENAANAICQLSGYNVNGRPLKCSWGKDRPPTG 378
>gi|119174082|ref|XP_001239402.1| hypothetical protein CIMG_09023 [Coccidioides immitis RS]
Length = 485
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 186/304 (61%), Gaps = 27/304 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIP-DKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+G+ +S + + PQ+ TT YVGNL+ T D
Sbjct: 271 QQAMAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQND 325
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG
Sbjct: 326 LVPLFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 383
Query: 329 TPPG 332
P G
Sbjct: 384 PPTG 387
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
++VG L P VT+ L F +++ D K +S+G +GFV + + A+ A+
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + SN E+ +
Sbjct: 153 TLNGRRVHQSEIRVNWAYQ-----------------------------SNNANKEDTSNH 183
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 184 FHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKA 241
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ + L + I+C+W ++ P S
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSIS 269
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 298
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|392869588|gb|EJB11873.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides immitis RS]
Length = 466
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 186/304 (61%), Gaps = 27/304 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 92 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIP-DKNFQSKGLNYGFVEYDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+G+ +S + + PQ+ TT YVGNL+ T D
Sbjct: 271 QQAMAAMGMTPTTPFGHHHFPTHGV-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQND 325
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG
Sbjct: 326 LVPLFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDR 383
Query: 329 TPPG 332
P G
Sbjct: 384 PPTG 387
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
++VG L P VT+ L F +++ D K +S+G +GFV + + A+ A+
Sbjct: 94 LYVGGLDPRVTEDILRQIFETTGHVQSVKIIPD-KNFQSKGLNYGFVEYDDPGAAERAMQ 152
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + SN E+ +
Sbjct: 153 TLNGRRVHQSEIRVNWAYQ-----------------------------SNNANKEDTSNH 183
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 184 FHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKA 241
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ + L + I+C+W ++ P S
Sbjct: 242 LSSMDGEWLGSRAIRCNWANQKGQPSIS 269
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 141/334 (42%), Positives = 195/334 (58%), Gaps = 41/334 (12%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I K+K +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDADKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 271 QQAMAAMGMTPTTAFGHHHFPTHGI-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQTD 325
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG K
Sbjct: 326 LVPLFQNF--GYVIETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWG-KD 382
Query: 329 TPP--------------GTSSTPLPPPPAPHLPG 348
PP G SSTP P P PG
Sbjct: 383 RPPTGQFDNFSGQQSNSGFSSTPTPYFPQYGGPG 416
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 239 DKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 298
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTTQTDLVPLFQNFGYVIETRLQAD------RGFAFIKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 353 DTHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/329 (41%), Positives = 187/329 (56%), Gaps = 35/329 (10%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALAIV 103
+YVGN+ P+VT+ +L E+F+ GP+ K+I+ D++ +YGFV+Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQ-DRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 104 TLNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
TLNGR IF I+VNWAY +Q +EDT H++VFVGDLSPEV D L F F + S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ-- 220
RVMWD +G+SRG+GF+SFR++ DA+ AI +NG+WLG+R IR NWA + +G +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 221 -----SSDSKSVVELTNGISDG----------------QEKSNEDAPENNPQY-TTVYVG 258
S+ S GI S E P++ TTVYVG
Sbjct: 203 ATPSYSAPSMGAPPAPAGIPSAYGAPVPGVVPGVGVGGAVGSYETVASQTPEFNTTVYVG 262
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL T DL F G I ++R+Q D+GF FV+ TH AALAI +++ G+
Sbjct: 263 NLIPYTTQADLIPLFQGY--GYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGR 320
Query: 319 PIKCSWGS-KPTPPGTSSTPLPPPPAPHL 346
PIKCSWG K + G + PP P L
Sbjct: 321 PIKCSWGKDKGSMEGGAPAAGYPPMQPQL 349
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 49/228 (21%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR-GFGFVSFRNQEDAQSAIN 192
+++VG+LSP VTD L F+V A+++ D+ +GFV + + A A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + ++ Q +
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQ------------------------------HH 112
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ + RV D +G+GF+ + +A A
Sbjct: 113 YHVFVGDLSPEVNDDVLSKAFGAF--GSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQA 170
Query: 307 IQMGNARILCGKPIKCSWGSKP----------TPPGTSSTPLPPPPAP 344
I N L + I+ +W ++ P S+ + PPAP
Sbjct: 171 IASMNGEWLGSRAIRVNWANQKTQTGGTRTGGATPSYSAPSMGAPPAP 218
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F G + ++ + D+ + FV ++AALAI L +
Sbjct: 258 TVYVGNLIPYTTQADLIPLFQGYGYIVEIRM-QADR-GFAFVKLDTHQNAALAITHLQNQ 315
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 316 LVHGRPIKCSWG 327
>gi|347839348|emb|CCD53920.1| similar to nuclear and cytoplasmic polyadenylated RNA-binding
protein pub1 [Botryotinia fuckeliana]
Length = 506
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 139/350 (39%), Positives = 199/350 (56%), Gaps = 34/350 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---------SYGFVDYFDRRSA 98
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A
Sbjct: 89 RALYVGGLDPRVTEEILRQIFETTGHVQNVKIIP-DKNVGAVQSKGFNYGFVEYDDPGAA 147
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVF 156
A+ TLNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F
Sbjct: 148 ERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF 207
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATS 215
+ S+ARVMWD KTGRSRG+GF +FR ++DA+ A++ ++G+WLG+R IRCNWA KG S
Sbjct: 208 GSVSEARVMWDMKTGRSRGYGFAAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQPS 267
Query: 216 GDEKQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVT 265
++Q+ + + T+G+ +S + + PQ+ TT YVGNL+ T
Sbjct: 268 ISQQQAMSAMGMTPTTPFGHHHFPTHGV-----QSYDMIVQQTPQWQTTCYVGNLTPYTT 322
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
DL F G + + R Q D+GF FV+ +H AALAI + + G+P+KCSWG
Sbjct: 323 QQDLVPLFQNF--GYVVETRFQSDRGFAFVKMDSHENAALAICQLSGYNVNGRPLKCSWG 380
Query: 326 SKPTPPGT----SSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAGAQA 371
P S P P GF T A + + + AG Q+
Sbjct: 381 KDKAPTSAGFDGSQQSYSPQAGPTPGGFPGTPNAYFPQYGGMPPQAGPQS 430
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGF + +R+ A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFAAFRERQDA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS-----SQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA SQ++ S HF
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMSAMGMTPTTPFGHHHFPTHGVQSY 298
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 299 DMIVQQTPQWQTTCYVGNLTPYTTQQDLVPLFQNFGYVVETRFQSD------RGFAFVKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI L+G + R ++C+W
Sbjct: 353 DSHENAALAICQLSGYNVNGRPLKCSWG 380
>gi|327357360|gb|EGE86217.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces dermatitidis ATCC 18188]
Length = 492
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 128/301 (42%), Positives = 182/301 (60%), Gaps = 23/301 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMAT 151
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 152 LNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 211
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 212 RVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 271
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T+G+ +S + PQ+ TT YVGNL+ T DL
Sbjct: 272 MAAMGMTPTTPFGHHHFPTHGV-----QSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIP 326
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P
Sbjct: 327 LFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPT 384
Query: 332 G 332
G
Sbjct: 385 G 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 296
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 297 DMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 350
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI L+G + R ++C+W
Sbjct: 351 DTHENAAMAICQLSGYNVNGRPLKCSWG 378
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 179/303 (59%), Gaps = 20/303 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----------YGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I S YGFV+Y D +
Sbjct: 86 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTVSSPSVNSKGFNYGFVEYDDPGA 145
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A + TLNGR I I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS
Sbjct: 146 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 205
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGAT 214
F S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG
Sbjct: 206 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADAERALSSMDGEWLGSRAIRCNWANQKGQP 265
Query: 215 SGDEKQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDL 269
S ++Q+ S + T + +S + PQ+ TT YVGNL+ + DL
Sbjct: 266 SISQQQAMASMGMTPTTPFGHHHFPTQGVQSYDMVVAQTPQWQTTCYVGNLTPYTSQSDL 325
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 326 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRP 383
Query: 330 PPG 332
P G
Sbjct: 384 PTG 386
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ GP+ +++ K+ YGFV + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 238 ERALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTQGVQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + + L F F ++ R D RGF F+
Sbjct: 298 DMVVAQTPQWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 352 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 386
>gi|345571041|gb|EGX53856.1| hypothetical protein AOL_s00004g515 [Arthrobotrys oligospora ATCC
24927]
Length = 496
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 134/328 (40%), Positives = 192/328 (58%), Gaps = 25/328 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT+ +L+++F +TG + K+I + +YGFV+Y D +A A+ T
Sbjct: 78 RALYVGGLDPRVTDDILRQIFETTGHVVSVKIIPDKNAKGFNYGFVEYDDPGAAERAMQT 137
Query: 105 LNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY SSQ +EDTS HF++FVGDLS EV D L F+ F T S+A
Sbjct: 138 LNGRRVHQSEIRVNWAYQSSQAAKEDTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEA 197
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV++R + DA+ A++ ++G+WLG+R IRCNWA + +QS
Sbjct: 198 RVMWDMKTGRSRGYGFVAYRERSDAEKALSAMDGEWLGSRAIRCNWANQKGQPSISQQSQ 257
Query: 223 DSKSVVE----------LTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
++ + T+GI +S + + PQ+ TTVYVGNL+ T DL
Sbjct: 258 MAQMGMTPTTPFGHHHFPTHGI-----QSYDMIVQQTPQWQTTVYVGNLTPYTTQNDLLP 312
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G I + R Q D+GF F++ TH AA+AI + + G+P+KCSWG P
Sbjct: 313 LFQNF--GYIVETRFQADRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPT 370
Query: 332 G--TSSTPLPPPPAPHLPGFSATDLAAY 357
G +P P P P ++ Y
Sbjct: 371 GQFDGYSPQGGPQTPQFPNSPFSNFPQY 398
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + LLQ+ F++ G + +++ K+ YGFV Y +R A
Sbjct: 163 DTSHHFHIFVGDLSNEVNDELLQQAFTTFGTISEARVMWDMKTGRSRGYGFVAYRERSDA 222
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFN--------- 134
A+ ++G + + I+ NWA Q + GH +
Sbjct: 223 EKALSAMDGEWLGSRAIRCNWANQKGQPSISQQSQMAQMGMTPTTPFGHHHFPTHGIQSY 282
Query: 135 -------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T L F F + R D RGF F+
Sbjct: 283 DMIVQQTPQWQTTVYVGNLTPYTTQNDLLPLFQNFGYIVETRFQAD------RGFAFIKM 336
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI L+G + R ++C+W +G
Sbjct: 337 DTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 371
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 137/329 (41%), Positives = 186/329 (56%), Gaps = 35/329 (10%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALAIV 103
+YVGN+ P+VT+ +L E+F+ GP+ K+I+ D++ +YGFV+Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQ-DRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 104 TLNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
TLNGR IF I+VNWAY +Q +EDT H++VFVGDLSPEV D L F F + S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD +G+SRG+GF+SFR++ DA+ AI +NG+WLG+R IR NWA + +G +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 223 DSKSVVELTNGI-----------------------SDGQEKSNEDAPENNPQY-TTVYVG 258
+ S G G S E P++ TTVYVG
Sbjct: 203 GTPSYSAPPMGAPPVPAGVPSAYGAAAPGVVPGVGVGGAVGSFETVASQTPEFNTTVYVG 262
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL T DL F G I ++R+Q D+GF FV+ TH AALAI +++ G+
Sbjct: 263 NLIPYTTQADLIPLFQGY--GYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGR 320
Query: 319 PIKCSWGS-KPTPPGTSSTPLPPPPAPHL 346
PIKCSWG K + G + PP P L
Sbjct: 321 PIKCSWGKDKGSMEGGAPAAGYPPMQPQL 349
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR-GFGFVSFRNQEDAQSAIN 192
+++VG+LSP VTD L F+V A+++ D+ +GFV + + A+ A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQDRNFQHGGFNYGFVEYADMRSAEQALT 82
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + + +IR NWA +G + ++ Q +
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQ------------------------------HH 112
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ + RV D +G+GF+ + +A A
Sbjct: 113 YHVFVGDLSPEVNDDVLSKAFGAF--GSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQA 170
Query: 307 IQMGNARILCGKPIKCSWGSKP----------TPPGTSSTPLPPPPAP 344
I N L + I+ +W ++ P S+ P+ PP P
Sbjct: 171 IASMNGEWLGSRAIRVNWANQKTQTGGTRTGGGTPSYSAPPMGAPPVP 218
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F G + ++ + D+ + FV ++AALAI L +
Sbjct: 258 TVYVGNLIPYTTQADLIPLFQGYGYIVEIRM-QADR-GFAFVKLDTHQNAALAITHLQNQ 315
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 316 LVHGRPIKCSWG 327
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 132/326 (40%), Positives = 192/326 (58%), Gaps = 24/326 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I K+K +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEILLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + T + +S + + PQ+ TT YVGNL+ + DL F
Sbjct: 271 QQAMAAMGMTPTTPFGHHHFPTHGMQSYDMVVQQTPQWQTTCYVGNLTPYTSQNDLVPLF 330
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG- 332
G + + R+Q D+GF F++ +H AA+AI N + G+P+KCSWG P G
Sbjct: 331 QNF--GFVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTGQ 388
Query: 333 -------TSSTPLPPPPAPHLPGFSA 351
++P P P P +S
Sbjct: 389 FDNFPGQQGNSPFNSSPTPFFPQYSG 414
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 179 DTSNHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 238
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 239 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGMQSY 298
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + L F F + R+ D RGF F+
Sbjct: 299 DMVVQQTPQWQTTCYVGNLTPYTSQNDLVPLFQNFGFVLETRLQAD------RGFAFIKM 352
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI LNG + R ++C+W
Sbjct: 353 DSHENAAMAICQLNGYNVNGRPLKCSWG 380
>gi|296815788|ref|XP_002848231.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
gi|238841256|gb|EEQ30918.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Arthroderma otae CBS 113480]
Length = 507
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 184/299 (61%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGF++Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS +
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSNHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRDRADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + T + +S + + PQ+ TT YVGNL+ T DL F
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLF 340
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P G
Sbjct: 341 QNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
++VG L P VT+ L F +++ D K +S+G +GF+ + + A+ A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + T+ E S+ +
Sbjct: 163 TLNGRRVHQSEIRVNWAYQSNTASKEDTSN-----------------------------H 193
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 194 FHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRSRGYGFVAFRDRADAEKA 251
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ + L + I+C+W ++ P S
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSIS 279
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 189 DTSNHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRDRADA 248
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 249 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 308
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 309 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 362
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 363 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGF++Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS +
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + T + +S + + PQ+ TT YVGNL+ T DL F
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLF 340
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P G
Sbjct: 341 QNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
++VG L P VT+ L F +++ D K +S+G +GF+ + + A+ A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + T+ E SS +
Sbjct: 163 TLNGRRVHQSEIRVNWAYQSNTASKEDTSS-----------------------------H 193
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 194 FHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKA 251
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ + L + I+C+W ++ P S
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSIS 279
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 189 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 248
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 249 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 308
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 309 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 362
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 363 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/302 (42%), Positives = 181/302 (59%), Gaps = 19/302 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------YGFVDYFDRRSA 98
R++YVG + P+VT +L+++F +TG ++ K+I +S YGF++Y D +A
Sbjct: 97 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAA 156
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVF 156
A+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS
Sbjct: 157 ERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSAC 216
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATS 215
+ S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S
Sbjct: 217 GSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPS 276
Query: 216 GDEKQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLH 270
++Q+ + + T + +S + + PQ+ TT YVGNL+ T DL
Sbjct: 277 ISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLI 336
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P
Sbjct: 337 PLFQNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPP 394
Query: 331 PG 332
G
Sbjct: 395 TG 396
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 42/211 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG---RSRG--FGFVSFRNQEDAQS 189
++VG L P VT+ L F +++ D+ +S+G +GF+ + + A+
Sbjct: 99 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDDPGAAER 158
Query: 190 AINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN 249
A+ LNG+ + +IR NWA + T+ E SS
Sbjct: 159 AMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSS--------------------------- 191
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEA 303
+ ++VG+LS+EV L + F A G++ + RV R +G+GFV + +A
Sbjct: 192 --HFHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRSRGYGFVAFRERADA 247
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
A+ + L + I+C+W ++ P S
Sbjct: 248 EKALSSMDGEWLGSRAIRCNWANQKGQPSIS 278
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 188 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 247
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 248 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 307
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 308 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 361
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 362 DTHENAAMAICQLNGYNVNGRPLKCSWG 389
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 183/299 (61%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGF++Y D +A A
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGLNYGFIEYDDPGAAERA 160
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS +
Sbjct: 161 MQTLNGRRVHQSEIRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSV 220
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 221 SEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQ 280
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + T + +S + + PQ+ TT YVGNL+ T DL F
Sbjct: 281 QQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLF 340
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P G
Sbjct: 341 QNF--GYVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
++VG L P VT+ L F +++ D K +S+G +GF+ + + A+ A+
Sbjct: 104 LYVGGLDPRVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGLNYGFIEYDDPGAAERAMQ 162
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + T+ E SS +
Sbjct: 163 TLNGRRVHQSEIRVNWAYQSNTASKEDTSS-----------------------------H 193
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 194 FHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKA 251
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ + L + I+C+W ++ P S
Sbjct: 252 LSSMDGEWLGSRAIRCNWANQKGQPSIS 279
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 189 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 248
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 249 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 308
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 309 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 362
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 363 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 397
>gi|164424152|ref|XP_962723.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
gi|157070397|gb|EAA33487.2| hypothetical protein NCU07874 [Neurospora crassa OR74A]
Length = 480
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 144/367 (39%), Positives = 201/367 (54%), Gaps = 30/367 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I K K +YGFV+Y D +A A+ T
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAERAMQT 150
Query: 105 LNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S+ +EDTSGHF++FVGDLS EV D L FS F + S+A
Sbjct: 151 LNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 210
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 211 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 264
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TT YVGNL+ T DL
Sbjct: 265 IAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNLTPYTTQNDLV 324
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 325 PLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDKTP 382
Query: 331 PGTSSTPLPP--PPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALKLG--MG 386
P P P + PG+ T + Y S PQAQ G MG
Sbjct: 383 NPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGNYNGPQAQSPAGYGSQMG 441
Query: 387 AAGASQA 393
G A
Sbjct: 442 YNGPPSA 448
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 176 DTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 235
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 236 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSY 295
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 296 DMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKM 349
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 350 DTHENAAMAICQLNGYQVNGRPLKCSWG 377
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 26/324 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 76 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADRAMAT 135
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 136 LNGRRVHQSEIRVNWAYQSNTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEA 195
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 196 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 255
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +GI+ S E P + TT YVGNL+ T D+
Sbjct: 256 MQAMGMTPTTPFGHHQFPAHGIA-----SYEMILAQTPNWQTTCYVGNLTPYTTHTDVVP 310
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 311 LFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPN 368
Query: 332 GTSSTPLPPPPAPHL---PGFSAT 352
S P P +P PGF T
Sbjct: 369 SQSFDPQQQPYSPQTSQAPGFPGT 392
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 47/214 (21%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N + D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV +
Sbjct: 155 NTTTKEDTSNHFHIFVGDLSNEVNDDILHQAFSAFGSVSEARVMWDMKTGRSRGYGFVAF 214
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-- 135
DR A A+ +++G + + I+ NWA Q GH
Sbjct: 215 RDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPA 274
Query: 136 --------------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VG+L+P T + F F ++R D RG
Sbjct: 275 HGIASYEMILAQTPNWQTTCYVGNLTPYTTHTDVVPLFQNFGFVVESRFQAD------RG 328
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F+ E+A AI +NG + R ++C+W
Sbjct: 329 FAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWG 362
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 178/303 (58%), Gaps = 20/303 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----------YGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I +S YGFV+Y D +
Sbjct: 83 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 142
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A + TLNGR I I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS
Sbjct: 143 AERGMATLNGRRIHNNEIRVNWAYQSNNTAKEDTSNHFHIFVGDLSNEVNDEVLLQAFST 202
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGAT 214
F S+ARVMWD KTGRSRG+GFV+FR++ DA A++ ++G+WLG+R IRCNWA KG
Sbjct: 203 FGPVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQP 262
Query: 215 SGDEKQSSDSKSVVELT-----NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
S ++Q+ S + T + + G + + + TT YVGNL+ + DL
Sbjct: 263 SISQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVSQTPAWQTTCYVGNLTPYTSQSDL 322
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 323 VPLFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRP 380
Query: 330 PPG 332
P G
Sbjct: 381 PTG 383
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ GP+ +++ K+ YGFV + DR A
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 234
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 235 DRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSY 294
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + + L F F ++ R D RGF F+
Sbjct: 295 DMVVSQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKM 348
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 349 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 383
>gi|452986364|gb|EME86120.1| hypothetical protein MYCFIDRAFT_52503 [Pseudocercospora fijiensis
CIRAD86]
Length = 482
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/299 (42%), Positives = 182/299 (60%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVQSVKIIP-DKNFQSKGYNYGFVEYDDPGAAERA 139
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR + Q I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F
Sbjct: 140 MQTLNGRRVHQQEIRVNWAYQSNTATKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNV 199
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA KG S +
Sbjct: 200 SEARVMWDMKTGRSRGYGFVAFRDRGEAEKALSSMDGEWLGSRAIRCNWANQKGQPSFSQ 259
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + T + +S E PQ+ TT YVGNL+ T DL F
Sbjct: 260 QQAMAQMGMTPTTPYGHHSFPTQGPQSYETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLF 319
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R Q D+GF F++ +H AA AI + + G+P+KCSWG P G
Sbjct: 320 QNF--GYVTETRFQSDRGFAFIKMDSHENAANAICHLSGYQVNGRPLKCSWGKDRPPTG 376
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 168 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGNVSEARVMWDMKTGRSRGYGFVAFRDRGEA 227
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 228 EKALSSMDGEWLGSRAIRCNWANQKGQPSFSQQQAMAQMGMTPTTPYGHHSFPTQGPQSY 287
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++ R D RGF F+
Sbjct: 288 ETIVSQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSD------RGFAFIKM 341
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ E+A +AI L+G + R ++C+W +G
Sbjct: 342 DSHENAANAICHLSGYQVNGRPLKCSWGKDRPPTG 376
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/307 (42%), Positives = 178/307 (57%), Gaps = 34/307 (11%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALAIV 103
+YVGN+ P+VT+ +L E+F+ GP+ K+I+ D++ +YGFV+Y D RSA A+
Sbjct: 24 LYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQ-DRNFQHGGFNYGFVEYADMRSADQALT 82
Query: 104 TLNGRHIFGQPIKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
TLNGR IF I+VNWAY +Q +EDT H++VFVGDLSPEV D L F F + S+A
Sbjct: 83 TLNGRKIFDAEIRVNWAYQGNQNKEDTQHHYHVFVGDLSPEVNDDVLSKAFGAFGSLSEA 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD +G+SRG+GF+SFR++ DA+ AI +NG+WLG+R IR NWA + +G +
Sbjct: 143 RVMWDMNSGKSRGYGFLSFRDKADAEQAIASMNGEWLGSRAIRVNWANQKTQTGGTRTGG 202
Query: 223 DSKSV-----------------------VELTNGISDGQEKSNEDAPENNPQY-TTVYVG 258
+ S + G S E P++ TTVYVG
Sbjct: 203 GTPSYPAPPMGAPPAPAGVPSAYGAPAPGVVPGVGVGGAVGSYETVASQTPEFNTTVYVG 262
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL T DL F G I ++R+Q D+GF FV+ TH AALAI +++ G+
Sbjct: 263 NLIPYTTQADLIPLFQGY--GYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQLVHGR 320
Query: 319 PIKCSWG 325
PIKCSWG
Sbjct: 321 PIKCSWG 327
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGF--GFVSFRNQEDAQSAI 191
+++VG+LSP VTD L F+V A+++ D + + GF GFV + + A A+
Sbjct: 23 HLYVGNLSPRVTDYILTEIFAVAGPVVSAKIIQD-RNFQHGGFNYGFVEYADMRSADQAL 81
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
LNG+ + + +IR NWA +G + ++ Q
Sbjct: 82 TTLNGRKIFDAEIRVNWAYQGNQNKEDTQ------------------------------H 111
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAAL 305
+ V+VG+LS EV L + F A G++ + RV D +G+GF+ + +A
Sbjct: 112 HYHVFVGDLSPEVNDDVLSKAFGAF--GSLSEARVMWDMNSGKSRGYGFLSFRDKADAEQ 169
Query: 306 AIQMGNARILCGKPIKCSWGSK 327
AI N L + I+ +W ++
Sbjct: 170 AIASMNGEWLGSRAIRVNWANQ 191
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG+L P T A L F + + R+ D RGF FV ++A AI L
Sbjct: 259 VYVGNLIPYTTQADLIPLFQGYGYIVEIRMQAD------RGFAFVKLDTHQNAALAITHL 312
Query: 195 NGKWLGNRQIRCNWAA-KGATSG 216
+ + R I+C+W KG+ G
Sbjct: 313 QNQLVHGRPIKCSWGKDKGSMEG 335
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T A L +F G + ++ + D+ + FV ++AALAI L +
Sbjct: 258 TVYVGNLIPYTTQADLIPLFQGYGYIVEIRM-QADRG-FAFVKLDTHQNAALAITHLQNQ 315
Query: 109 HIFGQPIKVNWA 120
+ G+PIK +W
Sbjct: 316 LVHGRPIKCSWG 327
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 130/305 (42%), Positives = 183/305 (60%), Gaps = 28/305 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS-------SYGFVDYFDRRSAAL 100
R++YVG + P++T +L+++F + G + K+I DK+ +YGFV+Y D +A
Sbjct: 87 RALYVGGLDPRITEDVLRQIFETAGHVVSVKIIP-DKNKFQSKGLNYGFVEYDDPGTAER 145
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ TLNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F
Sbjct: 146 AMQTLNGRRVHQSEIRVNWAYQSNNQPKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQ 205
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGD 217
S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S
Sbjct: 206 VSEARVMWDMKTGRSRGYGFVAFRDRGDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 265
Query: 218 EKQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSV 267
++Q+ S + T+G+ +S E PQ+ TT YVGNL+ T
Sbjct: 266 QQQAMASMGMTPTTPYGHHHFPTHGV-----QSYEMVVNQTPQWQTTCYVGNLTPYTTQS 320
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DL F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 321 DLVPLFQNF--GYVVETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 378
Query: 328 PTPPG 332
P G
Sbjct: 379 RPPTG 383
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 47/211 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR
Sbjct: 172 PKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGQVSEARVMWDMKTGRSRGYGFVAFRDR 231
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV----- 135
A A+ +++G + + I+ NWA Q + GH +
Sbjct: 232 GDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPYGHHHFPTHGV 291
Query: 136 -----------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGF 178
+VG+L+P T + L F F + R D RGF F
Sbjct: 292 QSYEMVVNQTPQWQTTCYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSD------RGFAF 345
Query: 179 VSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI LNG + R ++C+W
Sbjct: 346 IKMDTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|367026720|ref|XP_003662644.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
gi|347009913|gb|AEO57399.1| hypothetical protein MYCTH_2303522 [Myceliophthora thermophila ATCC
42464]
Length = 500
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 125/300 (41%), Positives = 179/300 (59%), Gaps = 25/300 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 149
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D LF FS F + S+A
Sbjct: 150 LNGRRVHQSEIRVNWAYQSNNSNKEDTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISEA 209
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 210 RVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 263
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TT YVGNL+ T D+
Sbjct: 264 IAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMVVNQTPAWQTTCYVGNLTPYTTQTDIV 323
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 324 PLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTP 381
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLFQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADA 234
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 294
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F ++R D RGF F+
Sbjct: 295 DMVVNQTPAWQTTCYVGNLTPYTTQTDIVPLFQNFGFVVESRFQAD------RGFAFIKM 348
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 349 DTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|259488599|tpe|CBF88164.1| TPA: nuclear and cytoplasmic polyadenylated RNA-binding protein
pub1 (AFU_orthologue; AFUA_1G12000) [Aspergillus
nidulans FGSC A4]
Length = 477
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 190/328 (57%), Gaps = 33/328 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAALAI 102
R++YVG + P+VT +L+++F +TG + K+I ++YGFV++ D +A A+
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNFNSKGANYGFVEFDDPGAAERAM 149
Query: 103 VTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S
Sbjct: 150 QTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVS 209
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEK 219
+ARVMWD KTGRSRG+GFV+FR + DA+ A+ ++G+WLG+R IRCNWA KG S ++
Sbjct: 210 EARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSISQQ 269
Query: 220 QSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDL 269
Q+ + + T+GI +S + + P + TT YVGNL+ T D+
Sbjct: 270 QAMAAMGMTPTTPFGHHHFPTHGI-----QSYDMVVQQTPAWQTTCYVGNLTPYTTQNDI 324
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R+Q D+GF F++ TH AA AI N + G+P+KCSWG
Sbjct: 325 VPLFQNF--GYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKDRP 382
Query: 330 PPG--------TSSTPLPPPPAPHLPGF 349
P G +++P P P+ P +
Sbjct: 383 PTGQFDNFPGQQANSPFASSPGPYFPQY 410
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 236
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 237 EKALTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSY 296
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F + R+ D RGF F+
Sbjct: 297 DMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKM 350
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A SAI LNG + R ++C+W
Sbjct: 351 DTHENAASAICQLNGYNVNGRPLKCSWG 378
>gi|358059025|dbj|GAA95206.1| hypothetical protein E5Q_01862 [Mixia osmundae IAM 14324]
Length = 352
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/283 (42%), Positives = 170/283 (60%), Gaps = 9/283 (3%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVT 104
+Y+GNI P+VT +LQEVF+ GP++ K+I + +YGFV+++ + A A+ T
Sbjct: 14 LYIGNISPRVTEYMLQEVFALAGPVQQVKIIPDRTFQHGGLNYGFVEFYTMQGAEQALQT 73
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
L GR +F +KVNWAY + + +ED + HF+VF GDLSPEVTD L FS F + SDAR
Sbjct: 74 LAGRKLFDTEMKVNWAYQNQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSLSDAR 133
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSS 222
VMWD +G+SRG+GF++FR++ DA++AIN +NG+WLG+R IR NWA K +
Sbjct: 134 VMWDMASGKSRGYGFLAFRDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMMGDGGMG 193
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
+ + G G N + TTVYVGNL T DL F G I
Sbjct: 194 EGPPPPARSGGFQVGGSDYNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGY--GYIV 251
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
++R+Q D+GF FV+ TH AA+AI ++ G+ +KCSWG
Sbjct: 252 EIRMQADRGFAFVKLDTHEHAAMAIAYLTGQMCQGRSLKCSWG 294
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 87/209 (41%), Gaps = 42/209 (20%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N + D + V+ G++ P+VT+ +LQ+ FS+ G L +++ S YGF+ +
Sbjct: 92 NQTAKEDVTNHFHVFCGDLSPEVTDDILQKTFSAFGSLSDARVMWDMASGKSRGYGFLAF 151
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-------------SGHF------ 133
DR A AI +NG + + I+VNWA +Q SG F
Sbjct: 152 RDRADAEAAINAMNGEWLGSRAIRVNWANQKNQGMMGDGGMGEGPPPPARSGGFQVGGSD 211
Query: 134 -------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
V+VG+L P T A L F + + R+ D RGF FV
Sbjct: 212 YNMVVTQTPVSNTTVYVGNLVPYCTQADLIPLFQGYGYIVEIRMQAD------RGFAFVK 265
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E A AI L G+ R ++C+W
Sbjct: 266 LDTHEHAAMAIAYLTGQMCQGRSLKCSWG 294
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAI 191
++++G++SP VT+ L F++ +++ D +T + G +GFV F + A+ A+
Sbjct: 13 HLYIGNISPRVTEYMLQEVFALAGPVQQVKIIPD-RTFQHGGLNYGFVEFYTMQGAEQAL 71
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
L G+ L + +++ NWA + N+ A E+
Sbjct: 72 QTLAGRKLFDTEMKVNWAYQ------------------------------NQTAKEDVTN 101
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAAL 305
+ V+ G+LS EVT L + F A G++ D RV D +G+GF+ + +A
Sbjct: 102 HFHVFCGDLSPEVTDDILQKTFSAF--GSLSDARVMWDMASGKSRGYGFLAFRDRADAEA 159
Query: 306 AIQMGNARILCGKPIKCSWGSK 327
AI N L + I+ +W ++
Sbjct: 160 AINAMNGEWLGSRAIRVNWANQ 181
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 135/324 (41%), Positives = 191/324 (58%), Gaps = 26/324 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 77 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 136
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 137 LNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSEA 196
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 197 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 256
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +GI+ S E P + TT YVGNL+ T D+
Sbjct: 257 MQAMGMTPTTPFGHHQFPAHGIA-----SYEMILAQTPNWQTTCYVGNLTPYTTPNDVVP 311
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 312 LFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPN 369
Query: 332 GTSSTPLPPPPAPHL---PGFSAT 352
S P P +P PGF T
Sbjct: 370 SGSFDPQQQPYSPQTSQAPGFPGT 393
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 47/214 (21%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N + D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV +
Sbjct: 156 NTTSKEDTSNHFHIFVGDLSNEVNDDILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAF 215
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHF---- 133
DR A A+ +++G + + I+ NWA Q GH
Sbjct: 216 RDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPA 275
Query: 134 ------------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VG+L+P T + F F ++R D RG
Sbjct: 276 HGIASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RG 329
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F+ E+A AI +NG + R ++C+W
Sbjct: 330 FAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWG 363
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 182/301 (60%), Gaps = 23/301 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMST 151
Query: 105 LNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 152 LNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 211
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 212 RVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 271
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T+G+ +S + PQ+ TT YVGNL+ T DL
Sbjct: 272 MAAMGMTPSTPFGHHHFPTHGV-----QSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIP 326
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P
Sbjct: 327 LFQNF--GYVVETRFQTDRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGRDRPPT 384
Query: 332 G 332
G
Sbjct: 385 G 385
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTPFGHHHFPTHGVQSY 296
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 297 DMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQTD------RGFAFVKM 350
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI L+G + R ++C+W
Sbjct: 351 DTHENAAMAICQLSGYNVNGRPLKCSWG 378
>gi|67517823|ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
gi|40747053|gb|EAA66209.1| hypothetical protein AN1091.2 [Aspergillus nidulans FGSC A4]
Length = 892
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 190/329 (57%), Gaps = 34/329 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK------SSYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I ++YGFV++ D +A A
Sbjct: 90 RALYVGGLDPRVTEDILKQIFETTGHVISVKIIPDKNQFNSKGANYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNTANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+ ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRERADAEKALTSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + P + TT YVGNL+ T D
Sbjct: 270 QQAMAAMGMTPTTPFGHHHFPTHGI-----QSYDMVVQQTPAWQTTCYVGNLTPYTTQND 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ F G + + R+Q D+GF F++ TH AA AI N + G+P+KCSWG
Sbjct: 325 IVPLFQNF--GYVIETRMQADRGFAFIKMDTHENAASAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG--------TSSTPLPPPPAPHLPGF 349
P G +++P P P+ P +
Sbjct: 383 PPTGQFDNFPGQQANSPFASSPGPYFPQY 411
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 238 EKALTSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGIQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F + R+ D RGF F+
Sbjct: 298 DMVVQQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGYVIETRMQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A SAI LNG + R ++C+W
Sbjct: 352 DTHENAASAICQLNGYNVNGRPLKCSWG 379
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 131/304 (43%), Positives = 185/304 (60%), Gaps = 27/304 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++YVG + P+VT +L+++F +TG + K+I DK+ +YGFV++ D +A A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIP-DKNFTTKGHNYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ +A A+N ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRAEADKALNSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 270 QQALVAMGMTPTTPFGHHHFPTHGI-----QSYDMVAQQTPQWQTTCYVGNLTPYTTQND 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF FV+ +H AA AI N + G+P+KCSWG
Sbjct: 325 LVPLFQNF--GYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG 332
P G
Sbjct: 383 PPTG 386
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 101/242 (41%), Gaps = 49/242 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQK-TGRSRGFGFVSFRNQEDAQSAIND 193
++VG L P VT+ L F +++ D+ T + +GFV F + A+ A+
Sbjct: 93 LYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAAERAMQT 152
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
LNG+ + +IR NWA +SN + E+ +
Sbjct: 153 LNGRRIHQSEIRVNWA-----------------------------YQSNSTSKEDTSNHF 183
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAI 307
++VG+LS+EV L + F A G++ + RV R +G+GFV + EA A+
Sbjct: 184 HIFVGDLSNEVNDEVLTQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRDRAEADKAL 241
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSS---------TPLPPPPAPHLP--GFSATDLAA 356
+ L + I+C+W ++ P S TP P H P G + D+ A
Sbjct: 242 NSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSYDMVA 301
Query: 357 YE 358
+
Sbjct: 302 QQ 303
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRAEA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 238 DKALNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTPFGHHHFPTHGIQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF FV
Sbjct: 298 DMVAQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A SAI LNG + R ++C+W
Sbjct: 352 DSHENAASAICQLNGYNVNGRPLKCSWG 379
>gi|361127946|gb|EHK99901.1| putative Nucleolysin TIA-1 [Glarea lozoyensis 74030]
Length = 505
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 181/301 (60%), Gaps = 21/301 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----------SYGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +
Sbjct: 87 RALYVGGLDPRVTEDVLRQIFETTGHVQHVKIIP-DKNVGAEQQAKGFNYGFVEYDDPGA 145
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A A+ TLNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS
Sbjct: 146 AERAMQTLNGRRVHQAEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSA 205
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGAT 214
F + S+ARVMWD KTGRSRG+GFV+FR ++DA+ A++ ++G+WLG+R IRCNWA KG
Sbjct: 206 FGSVSEARVMWDMKTGRSRGYGFVAFRERQDAEKALSSMDGEWLGSRAIRCNWANQKGQP 265
Query: 215 SGDEKQSSDSKSVVELT-----NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
S ++Q + + T + + G + + + TT YVGNL+ T DL
Sbjct: 266 SISQQQQMSAMGMTPTTPFGHHHFPTHGVQSFDMIVQQTPAWQTTCYVGNLTPYTTQNDL 325
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG
Sbjct: 326 IPLFQNF--GFVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDKA 383
Query: 330 P 330
P
Sbjct: 384 P 384
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 47/216 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R+ A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERQDA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYAS-----SQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA SQ++ S HF
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQQMSAMGMTPTTPFGHHHFPTHGVQSF 297
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 298 DMIVQQTPAWQTTCYVGNLTPYTTQNDLIPLFQNFGFVVETRFQAD------RGFAFVKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
E+A AI L+G + R ++C+W A + D
Sbjct: 352 DTHENAAMAICQLSGYNVNGRPLKCSWGKDKAPTQD 387
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/332 (41%), Positives = 192/332 (57%), Gaps = 38/332 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS--------SYGFVDYFDRRSAA 99
R++YVG + P+VT +L+++F +TG + K+I DK+ +YGFV++ D +A
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVVSVKIIP-DKNGQFTTKGHNYGFVEFDDPGAAE 149
Query: 100 LAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
A+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F
Sbjct: 150 RAMQTLNGRRIHQSEIRVNWAYQSNSTSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFG 209
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSG 216
+ S+ARVMWD KTGRSRG+GFV+FR++ +A A+N ++G+WLG+R IRCNWA KG S
Sbjct: 210 SVSEARVMWDMKTGRSRGYGFVAFRDRTEADKALNSMDGEWLGSRAIRCNWANQKGQPSI 269
Query: 217 DEKQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTS 266
++Q+ + + T+GI +S + + PQ+ TT YVGNL+ T
Sbjct: 270 SQQQALVAMGMTPTTAFGHHHFPTHGI-----QSYDMVAQQTPQWQTTCYVGNLTPYTTQ 324
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
DL F G + + R+Q D+GF FV+ +H AA AI N + G+P+KCSWG
Sbjct: 325 NDLVPLFQNF--GYVLETRLQADRGFAFVKMDSHENAASAICQLNGYNVNGRPLKCSWGK 382
Query: 327 KPTPPGT---------SSTPLPPPPAPHLPGF 349
P G SS P PA P +
Sbjct: 383 DRPPTGQFDNFSPQQGSSVPFNNSPAGFFPQY 414
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 180 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRTEA 239
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 240 DKALNSMDGEWLGSRAIRCNWANQKGQPSISQQQALVAMGMTPTTAFGHHHFPTHGIQSY 299
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF FV
Sbjct: 300 DMVAQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFVKM 353
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A SAI LNG + R ++C+W
Sbjct: 354 DSHENAASAICQLNGYNVNGRPLKCSWG 381
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/331 (40%), Positives = 193/331 (58%), Gaps = 34/331 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDK-----SSYGFVDYFDRRSAALA 101
R++YVG + +VT +L+++F +TG + K+I K+K +YGFV++ D +A A
Sbjct: 90 RALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEILQQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR++ DA A+ ++G+WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFRDRADADKALGSMDGEWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVD 268
+Q+ + + T+GI +S + + PQ+ TT YVGNL+ T D
Sbjct: 270 QQAMAAMGMTPTTAFGHHHFPTHGI-----QSYDMVVQQTPQWQTTCYVGNLTPYTTQND 324
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L F G + + R+Q D+GF F++ +H AA+AI N + G+P+KCSWG
Sbjct: 325 LVPLFQNF--GYVLETRLQADRGFAFIKMDSHENAAMAICQLNGYNVNGRPLKCSWGKDR 382
Query: 329 TPPG--------TSSTPLPPPPAPHLPGFSA 351
P G ++P PAP+ P +
Sbjct: 383 PPTGQFDNFSGQQGNSPFNNSPAPYFPQYGG 413
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +LQ+ FS+ G + +++ K+ YGFV + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEILQQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 238 DKALGSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTAFGHHHFPTHGIQSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 298 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVLETRLQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI LNG + R ++C+W
Sbjct: 352 DSHENAAMAICQLNGYNVNGRPLKCSWG 379
>gi|350291093|gb|EGZ72307.1| hypothetical protein NEUTE2DRAFT_144798 [Neurospora tetrasperma
FGSC 2509]
Length = 490
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 201/377 (53%), Gaps = 40/377 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-------------KKDKSSYGFVDYFD 94
R++YVG + P+VT +L+++F +TG ++ K+I ++ +YGFV+Y D
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRQKGYNYGFVEYDD 150
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFAC 152
+A A+ TLNGR + I+VNWAY S+ +EDTSGHF++FVGDLS EV D L
Sbjct: 151 PGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEVLLQA 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F + S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA +
Sbjct: 211 FSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQ- 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNL 260
+ Q S ++ G++ + P + P + TT YVGNL
Sbjct: 270 -----KGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCYVGNL 324
Query: 261 SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+ T DL F G + + R Q D+GF F++ TH AA+AI N + G+P+
Sbjct: 325 TPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVNGRPL 382
Query: 321 KCSWGSKPTPPGTSSTPLPP--PPAPHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQ 378
KCSWG TP P P P + PG+ T + Y S PQAQ
Sbjct: 383 KCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGNYNGPQAQ 441
Query: 379 HALKLG--MGAAGASQA 393
G MG G A
Sbjct: 442 SPAGYGSQMGYNGPPSA 458
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 186 DTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 245
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 246 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSY 305
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 306 DMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKM 359
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 360 DTHENAAMAICQLNGYQVNGRPLKCSWG 387
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 23/299 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 86 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 145
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 146 LNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEA 205
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 206 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQA 265
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TT YVGNL+ T D+
Sbjct: 266 MQAMGLTPTTPFGHHQFPAHGVA-----SYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 320
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 321 LFQNF--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTP 377
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 171 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 230
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ--------------------------------- 125
A+ +++G + + I+ NWA Q
Sbjct: 231 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 290
Query: 126 ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ S +VG+L+P T + F F ++R D RGF F+
Sbjct: 291 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 344
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E A AI +NG + R ++C+W
Sbjct: 345 DSHESAAMAICQMNGYNVNGRPLKCSWG 372
>gi|336271351|ref|XP_003350434.1| hypothetical protein SMAC_02147 [Sordaria macrospora k-hell]
gi|380090956|emb|CCC11489.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 495
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 202/382 (52%), Gaps = 45/382 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI------------------KKDKSSYGF 89
R++YVG + P+VT +L+++F +TG ++ K+I ++ +YGF
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSPEQPHDAQQQKGYNYGF 150
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDA 147
V+Y D +A A+ TLNGR + I+VNWAY S+ +EDTSGHF++FVGDLS EV D
Sbjct: 151 VEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDE 210
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L FS F + S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCN
Sbjct: 211 VLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCN 270
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTV 255
WA + + Q S ++ G++ + P + P + TT
Sbjct: 271 WANQ------KGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTC 324
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
YVGNL+ T DL F G + + R Q D+GF F++ TH AA+AI N +
Sbjct: 325 YVGNLTPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQV 382
Query: 316 CGKPIKCSWGSKPTPPGTSSTPLPP--PPAPHLPGFSATDLAAYERQIALSKIAGAQALM 373
G+P+KCSWG TP P P P + PG+ T + Y Q S
Sbjct: 383 NGRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNQYGNSYPGQQANYN 441
Query: 374 HPQAQHALKLG--MGAAGASQA 393
PQAQ G MG G A
Sbjct: 442 GPQAQSPAGYGSQMGYNGPPSA 463
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 191 DTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 250
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 251 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSY 310
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 311 DMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKM 364
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 365 DTHENAAMAICQLNGYQVNGRPLKCSWG 392
>gi|367051094|ref|XP_003655926.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
gi|347003190|gb|AEO69590.1| hypothetical protein THITE_2120229 [Thielavia terrestris NRRL 8126]
Length = 500
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/333 (39%), Positives = 190/333 (57%), Gaps = 30/333 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 90 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKNARGYNYGFVEYDDPGAAERAMQT 149
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 150 LNGRRVHQSEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 209
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 210 RVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 263
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TT YVGNL+ T D+
Sbjct: 264 IAQQQAMQQMGLTPTTPYGHHHFPTHGIHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDIV 323
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG TP
Sbjct: 324 PLFQNF--GFVVESRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDKTP 381
Query: 331 ----PGTSSTPLPPPPAPHLPGFSATDLAAYER 359
P + P P A PG+ T A + +
Sbjct: 382 AHHQPFDPNQPYSPQSA-QTPGYPGTPSAYFNQ 413
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 175 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 234
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 235 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGIHSY 294
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F ++R D RGF FV
Sbjct: 295 DMIVNQTPAWQTTCYVGNLTPYTTQNDIVPLFQNFGFVVESRFQAD------RGFAFVKM 348
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 349 DTHENAAMAICQLNGYNVNGRPLKCSWG 376
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 23/299 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 146
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 147 LNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEA 206
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 207 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQA 266
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TT YVGNL+ T D+
Sbjct: 267 MQAMGLTPTTPFGHHQFPAHGVA-----SYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 321
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 322 LFQNF--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTP 378
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 231
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ--------------------------------- 125
A+ +++G + + I+ NWA Q
Sbjct: 232 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 291
Query: 126 ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ S +VG+L+P T + F F ++R D RGF F+
Sbjct: 292 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 345
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E A AI +NG + R ++C+W
Sbjct: 346 DSHESAAMAICQMNGYNVNGRPLKCSWG 373
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 182/299 (60%), Gaps = 23/299 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 146
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 147 LNGRRVHQSEIRVNWAYQSNTSSKEDTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEA 206
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 207 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQA 266
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TT YVGNL+ T D+
Sbjct: 267 MQAMGLTPTTPFGHHQFPAHGVA-----SYEVVLAQTPSWQTTCYVGNLTPYTTPNDVVP 321
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 322 LFQNF--GYVVESRFQADRGFAFIKMDSHESAAMAICQMNGYNVNGRPLKCSWGKDKTP 378
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 172 DTSNHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 231
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ--------------------------------- 125
A+ +++G + + I+ NWA Q
Sbjct: 232 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVASY 291
Query: 126 ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ S +VG+L+P T + F F ++R D RGF F+
Sbjct: 292 EVVLAQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGYVVESRFQAD------RGFAFIKM 345
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E A AI +NG + R ++C+W
Sbjct: 346 DSHESAAMAICQMNGYNVNGRPLKCSWG 373
>gi|242806685|ref|XP_002484795.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
gi|218715420|gb|EED14842.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces stipitatus ATCC 10500]
Length = 482
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/302 (43%), Positives = 181/302 (59%), Gaps = 23/302 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++Y+G + +VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 92 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGMNYGFVEYDDPGAAERA 150
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 151 MQTLNGRRIHQSEIRVNWAYQSNNSHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 210
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR EDA+ A+ ++ +WLG+R IRCNWA KG S +
Sbjct: 211 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 270
Query: 219 KQSSDSKSVVELTNGISDGQE-------KSNEDAPENNPQY-TTVYVGNLSSEVTSVDLH 270
+Q + + + +T G S + PQ+ TT YVGNL+ T DL
Sbjct: 271 QQ---AMAAMGMTPSAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLV 327
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG P
Sbjct: 328 PLFQNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPP 385
Query: 331 PG 332
G
Sbjct: 386 TG 387
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
+++G L VT+ L F +++ D K +S+G +GFV + + A+ A+
Sbjct: 94 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 152
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + SN E+ +
Sbjct: 153 TLNGRRIHQSEIRVNWAYQ-----------------------------SNNSHKEDTSNH 183
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 184 FHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKA 241
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
++ + L + I+C+W ++ P S
Sbjct: 242 LKSMDREWLGSRAIRCNWANQKGQPSIS 269
>gi|212538449|ref|XP_002149380.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069122|gb|EEA23213.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 424
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++Y+G + +VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGMNYGFVEYDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR EDA+ A+ ++ +WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + + S + PQ+ TT YVGNL+ T DL F
Sbjct: 270 QQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLF 329
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG P G
Sbjct: 330 QNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPPTG 386
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
+++G L VT+ L F +++ D K +S+G +GFV + + A+ A+
Sbjct: 93 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 151
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + SN E+ +
Sbjct: 152 TLNGRRIHQSEIRVNWAYQ-----------------------------SNNTHKEDTSNH 182
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 183 FHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKA 240
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
++ + L + I+C+W ++ P S
Sbjct: 241 LKSMDREWLGSRAIRCNWANQKGQPSIS 268
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/323 (40%), Positives = 189/323 (58%), Gaps = 25/323 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 75 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQT 134
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 135 LNGRRVHQSEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSEA 194
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 195 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 254
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TT YVGNL+ T D+
Sbjct: 255 MQAMGMTPTTPFGHHQFPAHGVA-----SYEMILAQTPNWQTTCYVGNLTPYTTPNDVVP 309
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG P
Sbjct: 310 LFQNF--GFVMESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKAPN 367
Query: 332 GTSSTPLPP--PPAPHLPGFSAT 352
S P P P PGF T
Sbjct: 368 SGSFDPQQPYSPQTSQAPGFPGT 390
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 87/218 (39%), Gaps = 47/218 (21%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N + D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV +
Sbjct: 154 NTTSKEDTSNHFHIFVGDLSNEVNDDILMQAFSAFGSVSEARVMWDMKTGRSRGYGFVAF 213
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-- 135
DR A A+ +++G + + I+ NWA Q GH
Sbjct: 214 RDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPFGHHQFPA 273
Query: 136 --------------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VG+L+P T + F F ++R D RG
Sbjct: 274 HGVASYEMILAQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVMESRFQAD------RG 327
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
F F+ + E+A AI +NG + R ++C+W A
Sbjct: 328 FAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKA 365
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/324 (40%), Positives = 192/324 (59%), Gaps = 26/324 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 84 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQT 143
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 144 LNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 203
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 204 RVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 263
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TTVYVGNL+ T D+
Sbjct: 264 MQAMGMTPTTPYGHHQFPAHGVA-----SYEVILTQTPSWQTTVYVGNLTPYTTPNDVVP 318
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 319 LFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTPS 376
Query: 332 GTSS-TPLPP--PPAPHLPGFSAT 352
+ P P P + PGF T
Sbjct: 377 AQGAFDPAQPYSPQSAQAPGFPGT 400
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 169 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 228
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ--------------------------------- 125
A+ +++G + + I+ NWA Q
Sbjct: 229 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 288
Query: 126 ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ S V+VG+L+P T + F F ++R D RGF F+
Sbjct: 289 EVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 342
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI +NG + R ++C+W
Sbjct: 343 DTHENAAMAICQMNGYNVNGRPLKCSWG 370
>gi|384245275|gb|EIE18770.1| RNA-binding domain-containing protein [Coccomyxa subellipsoidea
C-169]
Length = 351
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 183/310 (59%), Gaps = 25/310 (8%)
Query: 39 PPRF-DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD----KSSYGFVDYF 93
P R +++YVGN+HP VT+A+LQE+FS+ G + K+IK + YGFV +
Sbjct: 12 PARLGSGDAAKALYVGNLHPFVTDAMLQEIFSTLGQVGEIKIIKDKLTGLSAGYGFVQFL 71
Query: 94 DRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
D R+A +A+ +LNGR + GQ ++VNWA+ QRED++ F +FVGDL+ ++ D L F
Sbjct: 72 DHRAADMALQSLNGRVLHGQELRVNWAFQKDQREDSASQFQIFVGDLASDINDKLLCEAF 131
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
C+DARVMWD TGRS+G+GFVSF+ + DA+ A++ ++G LG+R+IRC WA
Sbjct: 132 QS-CGCADARVMWDHNTGRSKGYGFVSFKTRADAEQALSQMSGTMLGSRRIRCGWAQH-- 188
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
++ S S + V+ + +S Q +P+ VYVGNL+ +V+ +L
Sbjct: 189 ---KQENSQASFAAVDRVSTLSRAQA---------DPENANVYVGNLAPDVSDAELQTAV 236
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG---SKPTP 330
G + DV++ R G+ F ++++H +A AI + + L GK +KCSWG ++
Sbjct: 237 SQF--GAVLDVKIYRKGGYAFAQFASHADAVRAIVGLSGQNLGGKALKCSWGRHQARKGG 294
Query: 331 PGTSSTPLPP 340
PG + P+ P
Sbjct: 295 PGGAQLPVDP 304
>gi|340905400|gb|EGS17768.1| putative polyadenylated RNA protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 485
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/300 (42%), Positives = 184/300 (61%), Gaps = 25/300 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
R++YVG + P+VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A+
Sbjct: 93 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIP-DKNHRGYNYGFVEYDDPGAAERAMQ 151
Query: 104 TLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L+ FS F + S+
Sbjct: 152 TLNGRRVHQNEIRVNWAYQSNNANKEDTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISE 211
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQ 220
ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q
Sbjct: 212 ARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIHQQQ 271
Query: 221 SSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLH 270
+ + T+GI N+ P + TT YVGNL+ T DL
Sbjct: 272 AMQQMGMTPTTPYGHHHFPTHGIHSYDMVVNQ-----TPAWQTTCYVGNLTPYTTQNDLV 326
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R+Q D+GF F++ +H AA+AI N ++ G+P+KCSWG P
Sbjct: 327 PLFQNF--GYVVECRMQADRGFAFIKMDSHENAAMAICQLNGYMVNGRPLKCSWGKDRNP 384
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLWQAFSAFGSISEARVMWDMKTGRSRGYGFVAFRERADA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSIHQQQAMQQMGMTPTTPYGHHHFPTHGIHSY 297
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 298 DMVVNQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVECRMQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI LNG + R ++C+W
Sbjct: 352 DSHENAAMAICQLNGYMVNGRPLKCSWG 379
>gi|302904116|ref|XP_003049006.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729940|gb|EEU43293.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 474
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 182/299 (60%), Gaps = 23/299 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 84 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQT 143
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 144 LNGRRVHQSEIRVNWAYQSNTSNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 203
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 204 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 263
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TT YVGNL+ T D+
Sbjct: 264 MQAMGMTPTTPYGHHQFPAHGVA-----SYEVILTQTPSWQTTCYVGNLTPYTTPNDVVP 318
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 319 LFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 375
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 169 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 228
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH
Sbjct: 229 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 288
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F ++R D RGF F+
Sbjct: 289 EVILTQTPSWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 342
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI +NG + R ++C+W
Sbjct: 343 DTHENAAMAICQMNGYNVNGRPLKCSWG 370
>gi|402079107|gb|EJT74372.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 482
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 125/290 (43%), Positives = 178/290 (61%), Gaps = 14/290 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 87 RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADRAMQT 146
Query: 105 LNGRHIFGQPIKVNWAYASSQ---REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FSVF + S+
Sbjct: 147 LNGRRVHQSEIRVNWAYQSANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSE 206
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQ 220
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q
Sbjct: 207 ARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 266
Query: 221 SSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHA 275
+ + + T + +S E P Y TT YVGNL+ T+ DL F
Sbjct: 267 AMQAMGMTPTTPYGHHHFPTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQN 326
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + + R Q D+GF F++ TH A AI N + G+P+KCSWG
Sbjct: 327 F--GYVVESRFQSDRGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWG 374
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 37/199 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L VT+ L F + +++ D K + +GFV + + A A+ L
Sbjct: 89 LYVGGLDARVTEDVLRQIFETTGHVQNVKIIPD-KNAKGFNYGFVEYDDPGAADRAMQTL 147
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +IR NWA + A + ++ +S+ +
Sbjct: 148 NGRRVHQSEIRVNWAYQSANTTTKEDTSN----------------------------HFH 179
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQ 308
++VG+LS+EV L + F G++ + RV R +G+GFV + P+A A+
Sbjct: 180 IFVGDLSNEVNDEVLTQAFSVF--GSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALS 237
Query: 309 MGNARILCGKPIKCSWGSK 327
+ L + I+C+W ++
Sbjct: 238 SMDGEWLGSRAIRCNWANQ 256
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 47/222 (21%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFV 90
S N + D S ++VG++ +V + +L + FS G + +++ K+ YGFV
Sbjct: 165 SANTTTKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSEARVMWDMKTGRSRGYGFV 224
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------YASSQREDTSG----------HF 133
+ DR A A+ +++G + + I+ NWA A Q G HF
Sbjct: 225 AFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPYGHHHF 284
Query: 134 --------------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS 173
+VG+L+P T L F F ++R D
Sbjct: 285 PTHGMQSYEMVLNQTPAYQTTCYVGNLTPYTTANDLVPLFQNFGYVVESRFQSD------ 338
Query: 174 RGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
RGF F+ E+A SAI +LNG + R ++C+W T+
Sbjct: 339 RGFAFIKMDTHENATSAICNLNGYNVNGRPLKCSWGKDKNTA 380
>gi|336469273|gb|EGO57435.1| hypothetical protein NEUTE1DRAFT_129383 [Neurospora tetrasperma
FGSC 2508]
Length = 494
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 144/381 (37%), Positives = 202/381 (53%), Gaps = 44/381 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI----------------KKDKS-SYGFV 90
R++YVG + P+VT +L+++F +TG ++ K+I K+ K +YGFV
Sbjct: 91 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNVGKPGSEQPRDEKQQKGYNYGFV 150
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDAT 148
+Y D +A A+ TLNGR + I+VNWAY S+ +EDTSGHF++FVGDLS EV D
Sbjct: 151 EYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNQNKEDTSGHFHIFVGDLSNEVNDEV 210
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L FS F + S+ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNW
Sbjct: 211 LLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNW 270
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVY 256
A + + Q S ++ G++ + P + P + TT Y
Sbjct: 271 ANQ------KGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSYDMIVAQTPAWQTTCY 324
Query: 257 VGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILC 316
VGNL+ T DL F G + + R Q D+GF F++ TH AA+AI N +
Sbjct: 325 VGNLTPYTTQNDLVPLFQNF--GYVVESRFQADRGFAFIKMDTHENAAMAICQLNGYQVN 382
Query: 317 GKPIKCSWGSKPTPPGTSSTPLPP--PPAPHLPGFSATDLAAYERQIALSKIAGAQALMH 374
G+P+KCSWG TP P P P + PG+ T + Y S
Sbjct: 383 GRPLKCSWGKDKTPNPQQFDPNQPYSPQSAQTPGYPGTP-STYFNNYGNSYPGQQGNYNG 441
Query: 375 PQAQHALKLG--MGAAGASQA 393
PQAQ G MG G A
Sbjct: 442 PQAQSPAGYGSQMGYNGPPSA 462
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 190 DTSGHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 249
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 250 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGLTPTTPYGHHHFPTHGVHSY 309
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 310 DMIVAQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQAD------RGFAFIKM 363
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 364 DTHENAAMAICQLNGYQVNGRPLKCSWG 391
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/299 (42%), Positives = 180/299 (60%), Gaps = 23/299 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+
Sbjct: 87 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAERAMQN 146
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTSGHF++FVGDLS EV D L F+ F + S+A
Sbjct: 147 LNGRRVHQSEIRVNWAYQSNTTSKEDTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSEA 206
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 207 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 266
Query: 222 SDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ T GI+ S E P + TT YVGNL+ T DL
Sbjct: 267 LQQVGMTPTTPFGHHHFPTQGIN-----SYEMVINQTPAWQTTCYVGNLTPYTTQNDLVP 321
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 322 LFQNF--GYVVESRFQSDRGFAFIKLDSHENAAMAICQLNGYNVNGRPLKCSWGKDKTP 378
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + F+S G + +++ K+ YGFV + DR A
Sbjct: 172 DTSGHFHIFVGDLSNEVNDEVLTQAFTSFGSVSEARVMWDMKTGRSRGYGFVAFRDRPDA 231
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 232 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQALQQVGMTPTTPFGHHHFPTQGINSY 291
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 292 EMVINQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVESRFQSD------RGFAFIKL 345
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI LNG + R ++C+W
Sbjct: 346 DSHENAAMAICQLNGYNVNGRPLKCSWG 373
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/338 (40%), Positives = 192/338 (56%), Gaps = 42/338 (12%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS-------SYGFVDYFDRRSAAL 100
R++YVG + P+VT +L+++F +TG + K+I + +YGFV+Y D +A
Sbjct: 81 RALYVGGLDPRVTEDVLKQIFETTGHVVSVKIIPDKNAQFSSKGFNYGFVEYDDPGAAER 140
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ TLNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 141 AMTTLNGRRVHQAEIRVNWAYQSNSTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGS 200
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGD 217
S+ARVMWD KTGRSRG+GFV+FR + DA+ A+ ++G+WLG+R IR NWA KG S
Sbjct: 201 VSEARVMWDMKTGRSRGYGFVAFRERADAEKALASMDGEWLGSRAIRVNWANQKGQPSIS 260
Query: 218 EKQSSDSKSVVEL---------TNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSV 267
++Q+ + + T GI +S E P + TT YVGNL+ T
Sbjct: 261 QQQAMAAMGMSPTTPFGHHHFPTQGI-----QSYEMVVNQTPAWQTTCYVGNLTPYTTQA 315
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DL F G + + R Q D+GF F++ TH AA+AI + + G+P+KCSWG K
Sbjct: 316 DLVPLFQNF--GYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVNGRPLKCSWG-K 372
Query: 328 PTPP-------------GTSSTPLPPPPA-PHLPGFSA 351
PP G++STP PA P+ P + A
Sbjct: 373 DRPPTGQFDTYSPQTSVGSASTPGAYNPASPYFPQYGA 410
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 91/226 (40%), Gaps = 47/226 (20%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 170 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 229
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+VNWA Q + GH +
Sbjct: 230 EKALASMDGEWLGSRAIRVNWANQKGQPSISQQQAMAAMGMSPTTPFGHHHFPTQGIQSY 289
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T A L F F + R D RGF F+
Sbjct: 290 EMVVNQTPAWQTTCYVGNLTPYTTQADLVPLFQNFGYVVETRFQSD------RGFAFIKM 343
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
E+A AI L+G + R ++C+W +G S SV
Sbjct: 344 DTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTGQFDTYSPQTSV 389
>gi|212538447|ref|XP_002149379.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
gi|210069121|gb|EEA23212.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Talaromyces marneffei ATCC 18224]
Length = 482
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 179/299 (59%), Gaps = 17/299 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALA 101
R++Y+G + +VT +L+++F +TG ++ K+I DK+ +YGFV+Y D +A A
Sbjct: 91 RALYIGGLDARVTEDILKQIFETTGHVQSVKIIP-DKNFQSKGMNYGFVEYDDPGAAERA 149
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ TLNGR I I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F +
Sbjct: 150 MQTLNGRRIHQSEIRVNWAYQSNNTHKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSV 209
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDE 218
S+ARVMWD KTGRSRG+GFV+FR EDA+ A+ ++ +WLG+R IRCNWA KG S +
Sbjct: 210 SEARVMWDMKTGRSRGYGFVAFREFEDAEKALKSMDREWLGSRAIRCNWANQKGQPSISQ 269
Query: 219 KQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHF 273
+Q+ + + + S + PQ+ TT YVGNL+ T DL F
Sbjct: 270 QQAMAAMGMTPTAPFGHHHFPTHGANSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLF 329
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG P G
Sbjct: 330 QNF--GYVVETRLQADRGFAFLKMDTHENAAMAICQLNGYQVNGRPLKCSWGKDRPPTG 386
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 40/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG--FGFVSFRNQEDAQSAIN 192
+++G L VT+ L F +++ D K +S+G +GFV + + A+ A+
Sbjct: 93 LYIGGLDARVTEDILKQIFETTGHVQSVKIIPD-KNFQSKGMNYGFVEYDDPGAAERAMQ 151
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ + +IR NWA + SN E+ +
Sbjct: 152 TLNGRRIHQSEIRVNWAYQ-----------------------------SNNTHKEDTSNH 182
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALA 306
++VG+LS+EV L + F A G++ + RV R +G+GFV + +A A
Sbjct: 183 FHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFREFEDAEKA 240
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
++ + L + I+C+W ++ P S
Sbjct: 241 LKSMDREWLGSRAIRCNWANQKGQPSIS 268
>gi|389639074|ref|XP_003717170.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|351642989|gb|EHA50851.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Magnaporthe oryzae 70-15]
gi|440475727|gb|ELQ44390.1| nucleolysin TIA-1 [Magnaporthe oryzae Y34]
gi|440486439|gb|ELQ66302.1| nucleolysin TIA-1 [Magnaporthe oryzae P131]
Length = 479
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 127/293 (43%), Positives = 180/293 (61%), Gaps = 20/293 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 85 RALYVGGLDARVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADRAMQT 144
Query: 105 LNGRHIFGQPIKVNWAY---ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FSVF + S+
Sbjct: 145 LNGRRVHQSEIRVNWAYQAATSATKEDTSNHFHIFVGDLSNEVNDEVLTQAFSVFGSVSE 204
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQ 220
ARVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q
Sbjct: 205 ARVMWDMKTGRSRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQ 264
Query: 221 SSDSKSVVELTNGISDGQE-------KSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRH 272
+ S V +T G +S E P Y TT YVGNL+ T+ D+
Sbjct: 265 ---AMSAVGMTPTTPFGHHHFPTHGMQSYEMVVNQTPAYQTTCYVGNLTPYTTANDVVPL 321
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G + + R Q D+GF F++ +H AA AI N + G+P+KCSWG
Sbjct: 322 FQNF--GYVVESRFQADRGFAFIKMDSHENAAQAICGLNGYNVNGRPLKCSWG 372
>gi|302409198|ref|XP_003002433.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
gi|261358466|gb|EEY20894.1| nucleolysin TIA-1 [Verticillium albo-atrum VaMs.102]
Length = 443
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 127/299 (42%), Positives = 185/299 (61%), Gaps = 25/299 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I K K +YGFV+Y D +AA A+ T
Sbjct: 52 RALYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNQKGYNYGFVEYDDPGAAARAMQT 111
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L F+ F + S+A
Sbjct: 112 LNGRRV--HEIRVNWAYQSNTTSKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEA 169
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 170 RVMWDMKTGRSRGYGFVAFRDRPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQA 229
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TTVYVGNL+ T D+
Sbjct: 230 MQAMGMTPTTPFGHHQFPAHGMA-----SYEVILAQTPNWQTTVYVGNLTPYTTPNDVVP 284
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 285 LFQNF--GFVVESRFQADRGFAFIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTP 341
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 40/203 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++G L VT+ L F + +++ D K + +GFV + + A A+ L
Sbjct: 54 LYIGGLDQRVTEDVLRQIFETTGHVQNVKIIPD-KNQKGYNYGFVEYDDPGAAARAMQTL 112
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +IR NWA +SN + E+ +
Sbjct: 113 NGRRV--HEIRVNWA-----------------------------YQSNTTSKEDTSNHFH 141
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQ 308
++VG+LS+EV L + F A G++ + RV R +G+GFV + P+A A+
Sbjct: 142 IFVGDLSNEVNDEILSQAFAAF--GSVSEARVMWDMKTGRSRGYGFVAFRDRPDAEKALS 199
Query: 309 MGNARILCGKPIKCSWGSKPTPP 331
+ L + I+C+W ++ P
Sbjct: 200 SMDGEWLGSRAIRCNWANQKGQP 222
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/329 (40%), Positives = 193/329 (58%), Gaps = 26/329 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQT 141
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 142 LNGRRVHQSEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEA 201
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 202 RVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQA 261
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G++ S E P + TTVYVGNL+ T D+
Sbjct: 262 MQAMGMTPTTPYGHHQFPAHGVA-----SYEVILTQTPSWQTTVYVGNLTPYTTPNDVVP 316
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 317 LFQNF--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTPN 374
Query: 332 GTSS-TPLPP--PPAPHLPGFSATDLAAY 357
P+ P P + PGF T Y
Sbjct: 375 AQGGFDPVQPFSPQSAQAPGFPGTPTGYY 403
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 167 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 226
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ--------------------------------- 125
A+ +++G + + I+ NWA Q
Sbjct: 227 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 286
Query: 126 ----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ S V+VG+L+P T + F F ++R D RGF F+
Sbjct: 287 EVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 340
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI +NG + R ++C+W
Sbjct: 341 DSHENAAMAICQMNGYNVNGRPLKCSWG 368
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/300 (41%), Positives = 180/300 (60%), Gaps = 25/300 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 68 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADRAMQT 127
Query: 105 LNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY SS +EDTSGHF++FVGDLS EV D L FS F + S+A
Sbjct: 128 LNGRRVHQSEIRVNWAYQANSSGKEDTSGHFHIFVGDLSNEVNDDILTQAFSAFGSVSEA 187
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 188 RVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 241
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TTVYVGNL+ T D+
Sbjct: 242 MAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPNWQTTVYVGNLTPYTTPNDVV 301
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ TH A++AI N + G+P+KCSWG TP
Sbjct: 302 PLFQNF--GFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKTP 359
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 153 DTSGHFHIFVGDLSNEVNDDILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 212
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHF---------- 133
A+ +++G + + I+ NWA Q GH
Sbjct: 213 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSY 272
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T + F F ++R D RGF F+
Sbjct: 273 DVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 326
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI +NG + R ++C+W
Sbjct: 327 DTHENASMAICQMNGYNVNGRPLKCSWG 354
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/299 (41%), Positives = 181/299 (60%), Gaps = 27/299 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAERAMST 143
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F T S+A
Sbjct: 144 LNGR----REIRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEA 199
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGR+RG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 200 RVMWDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQA 259
Query: 222 SDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHR 271
+ + T +G+ N+ P + TT YVGNL+ T D+
Sbjct: 260 MQAMGLTPTTPFGHHQFPAHGVGSYDVVLNQ-----TPNWQTTCYVGNLTPYTTPNDVVP 314
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F G + + R Q D+GF F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 315 LFQNF--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 371
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 179/299 (59%), Gaps = 25/299 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 70 RALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAERAMQT 129
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S S +EDTSGHF++FVGDLS EV D L FS F + S+A
Sbjct: 130 LNGRRVHQSEIRVNWAYQSNTSGKEDTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSEA 189
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 190 RVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 243
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TTVYVGNL+ T D+
Sbjct: 244 MAQQQAMQAMGLTPTTPFGHHQFPTHGVGSYDVILAQTPTWQTTVYVGNLTPYTTPNDVV 303
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G + + R Q D+GF F++ TH A++AI N + G+P+KCSWG T
Sbjct: 304 PLFQNF--GFVVESRFQADRGFAFIKMDTHENASMAICQMNGYNVNGRPLKCSWGKDKT 360
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 155 DTSGHFHIFVGDLSNEVNDEILTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 214
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHF---------- 133
A+ +++G + + I+ NWA Q GH
Sbjct: 215 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGLTPTTPFGHHQFPTHGVGSY 274
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T + F F ++R D RGF F+
Sbjct: 275 DVILAQTPTWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 328
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI +NG + R ++C+W
Sbjct: 329 DTHENASMAICQMNGYNVNGRPLKCSWG 356
>gi|348522243|ref|XP_003448635.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Oreochromis niloticus]
Length = 387
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 181/307 (58%), Gaps = 18/307 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VF+ GP + CK+I + Y FV+++D R AA ++ +
Sbjct: 8 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAM 67
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F F SDARV
Sbjct: 68 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARV 127
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + ++S
Sbjct: 128 VKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTHENNS 187
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G +S+ +T + + F G I +V
Sbjct: 188 KHL--------SFDEVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPF--GQIMEV 233
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAP 344
RV DKG+ FVR+++H AA AI N + G +KC WG K TP +S P P
Sbjct: 234 RVFPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHIVKCYWG-KETPDMMNSMQQMPVPQQ 292
Query: 345 HLPGFSA 351
+ GF+A
Sbjct: 293 NKMGFAA 299
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F G + +++K YGFV +F++ A
Sbjct: 91 DTSNHFHVFVGDLSPEITTEDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 150
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSGHFN--------------VFVGD 139
AI + G+ + G+ I+ NWA + E+ S H + V+ G
Sbjct: 151 ENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTHENNSKHLSFDEVVNQSSPSNCTVYCGG 210
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+S +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 211 VSTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGSSI 264
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 265 EGHIVKCYWGKE 276
>gi|432875366|ref|XP_004072806.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 221 bits (564), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 128/307 (41%), Positives = 182/307 (59%), Gaps = 18/307 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VF+ GP + CK+I + Y FV+++D R AA ++ +
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYDHRHAAASLAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S+S
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNS 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + +E ++ +P N TVY G +SS +T + + F A G I +V
Sbjct: 187 KHL--------SFEEVMSQSSPSN----CTVYCGGVSSGLTEQLMRQTFSAF--GQIMEV 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAP 344
RV DKG+ FVR+++H AA AI N + G +KC WG K TP +S P
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTSIDGHVVKCYWG-KETPDMMNSMQQMSIPQQ 291
Query: 345 HLPGFSA 351
+ GF A
Sbjct: 292 NKIGFPA 298
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDVKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSGHFN--------------VFVGD 139
AI + G+ + G+ I+ NWA + E S H + V+ G
Sbjct: 150 ENAIQHMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKHLSFEEVMSQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+S +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VSSGLTEQLMRQTFSAFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGTSI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 DGHVVKCYWGKE 275
>gi|302496843|ref|XP_003010422.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
gi|291173965|gb|EFE29782.1| hypothetical protein ARB_03123 [Arthroderma benhamiae CBS 112371]
Length = 541
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/332 (38%), Positives = 180/332 (54%), Gaps = 49/332 (14%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--------------------- 86
R++YVG + P+VT +L+++F +TG ++ K+I S
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQRLLLLYLSDLYLFFVLYVYL 161
Query: 87 ------------------YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS--SQR 126
YGF++Y D +A A+ TLNGR + I+VNWAY S + +
Sbjct: 162 NLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASK 221
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
EDTS HF++FVGDLS EV D L FS + S+ARVMWD KTGRSRG+GFV+FR + D
Sbjct: 222 EDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERAD 281
Query: 187 AQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDSKSVVELT----NGISDGQEKS 241
A+ A++ ++G+WLG+R IRCNWA KG S ++Q+ + + T + +S
Sbjct: 282 AEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQS 341
Query: 242 NEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTH 300
+ + PQ+ TT YVGNL+ T DL F G + + R Q D+GF FV+ TH
Sbjct: 342 YDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF--GYVVETRFQADRGFAFVKMDTH 399
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
AA+AI N + G+P+KCSWG P G
Sbjct: 400 ENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 431
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 223 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 282
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 283 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 342
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 343 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 396
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 397 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GF+ + + A+ A+ LNG+ + +IR NWA + T+ E SS
Sbjct: 180 YGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSS------------- 226
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RD 289
+ ++VG+LS+EV L + F A G++ + RV R
Sbjct: 227 ----------------HFHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRS 268
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
+G+GFV + +A A+ + L + I+C+W ++ P S
Sbjct: 269 RGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 313
>gi|302654241|ref|XP_003018929.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
gi|291182617|gb|EFE38284.1| hypothetical protein TRV_07061 [Trichophyton verrucosum HKI 0517]
Length = 543
Score = 221 bits (562), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/334 (38%), Positives = 180/334 (53%), Gaps = 51/334 (15%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--------------------- 86
R++YVG + P+VT +L+++F +TG ++ K+I S
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNVSQHLLLLYLSDLYLFFTYVLYV 161
Query: 87 --------------------YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS--S 124
YGF++Y D +A A+ TLNGR + I+VNWAY S +
Sbjct: 162 YLYLITSALLLVIFQSKGLNYGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTA 221
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
+EDTS HF++FVGDLS EV D L FS + S+ARVMWD KTGRSRG+GFV+FR +
Sbjct: 222 SKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRER 281
Query: 185 EDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDSKSVVELT----NGISDGQE 239
DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ + + T +
Sbjct: 282 ADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGV 341
Query: 240 KSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYS 298
+S + + PQ+ TT YVGNL+ T DL F G + + R Q D+GF FV+
Sbjct: 342 QSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF--GYVVETRFQADRGFAFVKMD 399
Query: 299 THPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
TH AA+AI N + G+P+KCSWG P G
Sbjct: 400 THENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 433
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 225 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 284
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 285 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 344
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 345 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 398
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 399 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 433
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GF+ + + A+ A+ LNG+ + +IR NWA + T+ E SS
Sbjct: 182 YGFIEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTASKEDTSS------------- 228
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RD 289
+ ++VG+LS+EV L + F A G++ + RV R
Sbjct: 229 ----------------HFHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRS 270
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
+G+GFV + +A A+ + L + I+C+W ++ P S
Sbjct: 271 RGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 315
>gi|171687054|ref|XP_001908468.1| hypothetical protein [Podospora anserina S mat+]
gi|170943488|emb|CAP69141.1| unnamed protein product [Podospora anserina S mat+]
Length = 481
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 120/293 (40%), Positives = 175/293 (59%), Gaps = 25/293 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++YVG + P+VT +L+++F +TG ++ K+I + +YGFV+Y D SA A+ T
Sbjct: 88 RALYVGGLDPRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGSAERAMQT 147
Query: 105 LNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S + +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 148 LNGRRVHQAEIRVNWAYQSNNTNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 207
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA + + Q S
Sbjct: 208 RVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQ------KGQPS 261
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENN-----------PQY-TTVYVGNLSSEVTSVDLH 270
++ G++ + P + P + TT YVGNL+ T DL
Sbjct: 262 IAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMIVNQTPAWQTTCYVGNLTPYTTQNDLV 321
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCS
Sbjct: 322 PLFQNF--GFVVESRFQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCS 372
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 82/205 (40%), Gaps = 47/205 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 173 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 232
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 233 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 292
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F ++R D RGF F+
Sbjct: 293 DMIVNQTPAWQTTCYVGNLTPYTTQNDLVPLFQNFGFVVESRFQAD------RGFAFIKM 346
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRC 206
E+A AI LNG + R ++C
Sbjct: 347 DTHENAAMAICQLNGYNVNGRPLKC 371
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/340 (38%), Positives = 194/340 (57%), Gaps = 37/340 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I + +YGFV+Y D +A A+ T
Sbjct: 82 RALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAERAMQT 141
Query: 105 LNGRHIF-----------GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFA 151
LNGR + + I+VNWAY S + +EDTS HF++FVGDLS EV D L
Sbjct: 142 LNGRRVHQSVPYPDTTRNSKEIRVNWAYQSNTTNKEDTSNHFHIFVGDLSNEVNDEVLTQ 201
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-A 210
FS F + S+ARVMWD KTGRSRG+GFV+FR++ +A+ A++ ++G+WLG+R IRCNWA
Sbjct: 202 AFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEAEKALSSMDGEWLGSRAIRCNWANQ 261
Query: 211 KGATSGDEKQSSDSKSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNL 260
KG S ++Q+ + + T +G++ S E P + TTVYVGNL
Sbjct: 262 KGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVA-----SYEVILTQTPSWQTTVYVGNL 316
Query: 261 SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+ T D+ F G + + R Q D+GF F++ +H AA+AI N + G+P+
Sbjct: 317 TPYTTPNDVVPLFQNF--GFVVESRFQADRGFAFIKMDSHENAAMAICQMNGYNVNGRPL 374
Query: 321 KCSWGSKPTPPGTSS-TPLPP--PPAPHLPGFSATDLAAY 357
KCSWG TP P+ P P + PGF T Y
Sbjct: 375 KCSWGKDKTPNAQGGFDPVQPFSPQSAQAPGFPGTPTGYY 414
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 85/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 178 DTSNHFHIFVGDLSNEVNDEVLTQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRDRPEA 237
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHF---------- 133
A+ +++G + + I+ NWA Q GH
Sbjct: 238 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQAMGMTPTTPYGHHQFPAHGVASY 297
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
V+VG+L+P T + F F ++R D RGF F+
Sbjct: 298 EVILTQTPSWQTTVYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 351
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ E+A AI +NG + R ++C+W
Sbjct: 352 DSHENAAMAICQMNGYNVNGRPLKCSWG 379
>gi|380748929|ref|NP_001244132.1| nucleolysin TIAR isoform 2 [Gallus gallus]
gi|28883273|gb|AAO49720.1| TIA-1 [Gallus gallus]
Length = 372
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/286 (41%), Positives = 174/286 (60%), Gaps = 18/286 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + + N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DDVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
RV DKG+ FVR+++H AA AI N + G +KC WG K TP
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 277
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A SA+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|413921567|gb|AFW61499.1| hypothetical protein ZEAMMB73_921536 [Zea mays]
Length = 185
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/132 (75%), Positives = 118/132 (89%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EPI +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 54 QMEPISNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 113
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRHI+GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 114 FVDYYDRRSAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 173
Query: 149 LFACFSVFPTCS 160
L+ACFS +P+CS
Sbjct: 174 LYACFSAYPSCS 185
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 35/142 (24%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+V+VG+++P VT++ L F +++ +K+ FGFV + ++ A AI
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 129
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
L+G+ + + I+ NWA E+ +
Sbjct: 130 LHGRHIYGQAIKVNWAYASTQR-------------------------------EDTSGHF 158
Query: 254 TVYVGNLSSEVTSVDLHRHFHA 275
++VG+LSSEV L+ F A
Sbjct: 159 HIFVGDLSSEVNDATLYACFSA 180
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK--GFGFVRYSTHPEAALAIQMGN 311
+VYVGN++ VT L F + G +E ++ R + FGFV Y AALAI +
Sbjct: 74 SVYVGNVNPNVTESLLIEVFQS--AGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLH 131
Query: 312 ARILCGKPIKCSWGSKPT 329
R + G+ IK +W T
Sbjct: 132 GRHIYGQAIKVNWAYAST 149
>gi|344306484|ref|XP_003421917.1| PREDICTED: nucleolysin TIAR-like [Loxodonta africana]
Length = 504
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 178/292 (60%), Gaps = 17/292 (5%)
Query: 39 PPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRR 96
P F+ R +YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R
Sbjct: 129 PATFEVQKGRLLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHR 188
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+
Sbjct: 189 DAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAP 248
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 249 FGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPA 308
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
Q +++K + ++ N+ +P+N TVY G ++S +T + + F
Sbjct: 309 PKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSP 356
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 357 F--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 406
>gi|414869521|tpg|DAA48078.1| TPA: hypothetical protein ZEAMMB73_400135 [Zea mays]
Length = 183
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 118/132 (89%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYG 88
Q+EP+ +GNLPP FD STCRSVYVGN++P VT +LL EVF S G +E CKLI+K+KSS+G
Sbjct: 52 QMEPVSNGNLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFG 111
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FVDY+DRRSAALAI+TL+GRH++GQ IKVNWAYAS+QREDTSGHF++FVGDLS EV DAT
Sbjct: 112 FVDYYDRRSAALAIMTLHGRHVYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDAT 171
Query: 149 LFACFSVFPTCS 160
L+ACFS +P+CS
Sbjct: 172 LYACFSAYPSCS 183
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 35/142 (24%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+V+VG+++P VT++ L F +++ +K+ FGFV + ++ A AI
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSS----FGFVDYYDRRSAALAIMT 127
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
L+G+ + + I+ NWA E+ +
Sbjct: 128 LHGRHVYGQAIKVNWAYASTQR-------------------------------EDTSGHF 156
Query: 254 TVYVGNLSSEVTSVDLHRHFHA 275
++VG+LSSEV L+ F A
Sbjct: 157 HIFVGDLSSEVNDATLYACFSA 178
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK--GFGFVRYSTHPEAALAIQMGN 311
+VYVGN++ VT L F + G +E ++ R + FGFV Y AALAI +
Sbjct: 72 SVYVGNVNPNVTESLLIEVFQS--AGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLH 129
Query: 312 ARILCGKPIKCSWGSKPT 329
R + G+ IK +W T
Sbjct: 130 GRHVYGQAIKVNWAYAST 147
>gi|47086779|ref|NP_997793.1| cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
gi|28279551|gb|AAH45368.1| Cytotoxic granule-associated RNA binding protein 1 [Danio rerio]
Length = 386
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 173/285 (60%), Gaps = 17/285 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++F GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 8 KTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAASLAAM 67
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA + SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 68 NGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARV 127
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + +++
Sbjct: 128 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNT 187
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G +++ +T + + F G I +V
Sbjct: 188 KHL--------SFDEVVNQSSPSN----CTVYCGGVTTGLTEQLMRQTFSPF--GQIMEV 233
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
RV DKG+ FVR+++H AA AI N L G +KC WG + T
Sbjct: 234 RVFPDKGYSFVRFNSHESAAHAIVSVNGTSLEGHIVKCYWGKETT 278
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 42/210 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + F C +++ D T + + FV F A +++ +
Sbjct: 10 LYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVD--TAGNDPYCFVEFFEHRHAAASLAAM 67
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA + S +K +S+ +
Sbjct: 68 NGRKIMGKEVKVNWAT--SPSSQKKDTSN----------------------------HFH 97
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 98 VFVGDLSPEITTDDIRAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 155
Query: 309 MGNARILCGKPIKCSWGSK--PTPPGTSST 336
+ L G+ I+ +W ++ P P T T
Sbjct: 156 QMGGQWLGGRQIRTNWATRKPPAPKATYET 185
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 91 DTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 150
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYA-----SSQREDTSGHFN--------------VFVGD 139
AI + G+ + G+ I+ NWA + E + H + V+ G
Sbjct: 151 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKATYETNTKHLSFDEVVNQSSPSNCTVYCGG 210
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG L
Sbjct: 211 VTTGLTEQLMRQTFSPFGQIMEVRVFPD------KGYSFVRFNSHESAAHAIVSVNGTSL 264
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 265 EGHIVKCYWGKE 276
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
++ Q T+YVGNLS +VT + + F + C V + + FV + H AA
Sbjct: 3 DDEQPKTLYVGNLSRDVTEALIMQLFGQIGPCKSCKMIVDTAGNDPYCFVEFFEHRHAAA 62
Query: 306 AIQMGNARILCGKPIKCSWGSKPT 329
++ N R + GK +K +W + P+
Sbjct: 63 SLAAMNGRKIMGKEVKVNWATSPS 86
>gi|41054740|ref|NP_957426.1| nucleolysin TIAR [Danio rerio]
gi|33416339|gb|AAH55501.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Danio
rerio]
Length = 370
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D S +++YVGN+ VT L+ ++F+ GP + CK+I + S+ Y FV++F+ R AA
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSV 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + +K Q + +E +++PQ TVY G + S +T + + F G
Sbjct: 183 QDNSAK------------QLRFDEVVNQSSPQNCTVYCGGIQSGLTEHLMRQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ F+R+S+H AA AI N + G +KC WG +
Sbjct: 229 QIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 276
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 40/210 (19%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED S ++VG+LS +VT+ + F+ C +++ + + + FV F D
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFFEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 94
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 95 -----HFHVFVGDLSPEITTDDIRAAFAPF--GKISDARVVKDMTTGKSKGYGFVSFYNK 147
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTP 330
+A AI + L G+ I+ +W ++ P
Sbjct: 148 LDAENAIVHMGGQWLGGRQIRTNWATRKPP 177
>gi|410922589|ref|XP_003974765.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 386
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/286 (41%), Positives = 172/286 (60%), Gaps = 18/286 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VF+ GP + CK+I + Y FV++++ R AA ++ +
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S+S
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNS 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + + N+ +P N TVY G +S+ +T + + F G I ++
Sbjct: 187 KQLCF--------DDVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPF--GPIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
RV DKG+ FVR+++H AA AI N + G +KC WG K TP
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWG-KETP 277
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+S +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGSSI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|14714709|gb|AAH10496.1| Tial1 protein [Mus musculus]
gi|148685700|gb|EDL17647.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Mus musculus]
gi|149067624|gb|EDM17176.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_d [Rattus norvegicus]
Length = 375
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 177/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 184 QETNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 95
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 96 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 148
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 149 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 183
>gi|432906488|ref|XP_004077556.1| PREDICTED: nucleolysin TIAR-like [Oryzias latipes]
Length = 382
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/290 (41%), Positives = 177/290 (61%), Gaps = 17/290 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D S R++YVGN+ VT L+ ++F+ GP + CK+I + S+ Y FV++F+ R AA
Sbjct: 3 DESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDL+P+++ + A F+ F
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPDISTEDVRAAFTPFGKI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 123 SDARVVKDLTTGKSKGYGFVSFYNKLDAENAIVHMAGQWLGGRQIRTNWATRKPPAPKSL 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q S SK Q + E +++PQ TVY G + SE++ + + F G
Sbjct: 183 QDSVSK------------QLRFEEVVTQSSPQNCTVYCGGIQSELSEHLMRQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I ++RV +KG+ F+R+S+H AA AI N + G +KC WG + T
Sbjct: 229 QIMEIRVFPEKGYSFIRFSSHDSAAHAIVSVNGTSIEGHAVKCYWGKEST 278
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 40/210 (19%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
+D S ++VG+LS +VT+ + F+ C +++ + + + FV F D
Sbjct: 2 DDESHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFFEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 94
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+L+ ++++ D+ F G I D RV +D KG+GFV +
Sbjct: 95 -----HFHVFVGDLNPDISTEDVRAAFTPF--GKISDARVVKDLTTGKSKGYGFVSFYNK 147
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTP 330
+A AI + L G+ I+ +W ++ P
Sbjct: 148 LDAENAIVHMAGQWLGGRQIRTNWATRKPP 177
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 168/300 (56%), Gaps = 33/300 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS------YGFVDYFDRRSAALAI 102
++YVGN+ +VT+ +L E+F++ G + K+I K + YGFV++ D R A AI
Sbjct: 19 TIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVEFADPRVAEQAI 78
Query: 103 VTLNGRHIFGQPIKVNWAYASSQ--------REDTSGHFNVFVGDLSPEVTDATLFACFS 154
+NGR IF I+ NWA S+ +EDT+ HF+VFVGDL+ E+ D L FS
Sbjct: 79 QDMNGRKIFNYEIRANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFS 138
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGA 213
F T S+A VMWD +G+SRGFGFV+FR++ DA+ AI +NG+WLG R IRCNWA KG
Sbjct: 139 EFGTMSEAHVMWDPLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKGQ 198
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRH 272
T+ Q GQ+ E + P Y T++YVGN+ V+ DL +
Sbjct: 199 TAMPAPQP---------------GQQLPYEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQP 243
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
F G +++V+ Q D+GF FV+ TH AA AI + G K SWG PPG
Sbjct: 244 FQRF--GYVQEVKFQADRGFAFVKMDTHENAANAIVHLQNMSINGNVTKLSWGKDRPPPG 301
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 103/227 (45%), Gaps = 36/227 (15%)
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR--SRGFGFVS 180
S+ E T+ ++VG+L VTD L F+ +++ +K + +GFV
Sbjct: 8 SNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFVE 67
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEK 240
F + A+ AI D+NG+ + N +IR NWA + S++ +++T
Sbjct: 68 FADPRVAEQAIQDMNGRKIFNYEIRANWA---------QPSANINPPLQMTK-------- 110
Query: 241 SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGF 294
E+ + V+VG+L++E+ L + F GT+ + V D +GFGF
Sbjct: 111 ------EDTTNHFHVFVGDLAAEINDEKLAQAFSEF--GTMSEAHVMWDPLSGKSRGFGF 162
Query: 295 VRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP 341
V + +A AI N L +PI+C+W T G ++ P P P
Sbjct: 163 VAFRDKTDAERAIATMNGEWLGTRPIRCNWA---TQKGQTAMPAPQP 206
>gi|4507499|ref|NP_003243.1| nucleolysin TIAR isoform 1 [Homo sapiens]
gi|194205608|ref|XP_001492932.2| PREDICTED: nucleolysin TIAR isoform 2 [Equus caballus]
gi|311271909|ref|XP_001928970.2| PREDICTED: nucleolysin TIAR isoform 1 [Sus scrofa]
gi|332835148|ref|XP_001154534.2| PREDICTED: nucleolysin TIAR isoform 2 [Pan troglodytes]
gi|345792875|ref|XP_865423.2| PREDICTED: nucleolysin TIAR isoform 18 [Canis lupus familiaris]
gi|390473245|ref|XP_002756491.2| PREDICTED: nucleolysin TIAR isoform 1 [Callithrix jacchus]
gi|395827975|ref|XP_003787163.1| PREDICTED: nucleolysin TIAR isoform 2 [Otolemur garnettii]
gi|397510637|ref|XP_003825699.1| PREDICTED: nucleolysin TIAR isoform 1 [Pan paniscus]
gi|402881650|ref|XP_003904379.1| PREDICTED: nucleolysin TIAR isoform 1 [Papio anubis]
gi|403259379|ref|XP_003922194.1| PREDICTED: nucleolysin TIAR [Saimiri boliviensis boliviensis]
gi|426253184|ref|XP_004020280.1| PREDICTED: nucleolysin TIAR isoform 1 [Ovis aries]
gi|426366372|ref|XP_004050232.1| PREDICTED: nucleolysin TIAR isoform 1 [Gorilla gorilla gorilla]
gi|267131|sp|Q01085.1|TIAR_HUMAN RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|189310|gb|AAA36384.1| nucleolysin TIAR [Homo sapiens]
gi|158254826|dbj|BAF83384.1| unnamed protein product [Homo sapiens]
gi|261858270|dbj|BAI45657.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[synthetic construct]
gi|380783711|gb|AFE63731.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|383408329|gb|AFH27378.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|384942770|gb|AFI34990.1| nucleolysin TIAR isoform 1 [Macaca mulatta]
gi|410218474|gb|JAA06456.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257382|gb|JAA16658.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296996|gb|JAA27098.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 375
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 177/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 184 QENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 95
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 96 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 148
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 149 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 183
>gi|47217530|emb|CAG02457.1| unnamed protein product [Tetraodon nigroviridis]
Length = 418
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/316 (39%), Positives = 182/316 (57%), Gaps = 19/316 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ +VF+ GP + CK+I + Y FV++++ R AA ++ +NGR
Sbjct: 15 YVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHAAASLAAMNGR 74
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F F SDARV+ D
Sbjct: 75 KIMGKEVKVNWATTPTSQKKDTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKD 134
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S+SK +
Sbjct: 135 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQL 194
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
+ N+ +P N TVY G +S+ +T + + F G I ++RV
Sbjct: 195 CF--------DDVVNQSSPSN----CTVYCGGVSTGLTEQLMRQTFSPF--GPIMEIRVF 240
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLP 347
DKG+ FVR+++H AA AI N + G +KC WG K TP ++ P P +P
Sbjct: 241 PDKGYSFVRFNSHESAAHAIVSVNGSSIEGHVVKCYWG-KETPDMMNTMQQMPMPQVGMP 299
Query: 348 -GFSATDLAAYERQIA 362
+ L A ER +A
Sbjct: 300 QACLPSSLTATERILA 315
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F G + +++K YGFV +F++ A
Sbjct: 95 DTSNHFHVFVGDLSPEITTDDVKAAFGPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 154
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 155 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKTTYESNSKQLCFDDVVNQSSPSNCTVYCGG 214
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+S +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 215 VSTGLTEQLMRQTFSPFGPIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGSSI 268
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 269 EGHVVKCYWGKE 280
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEA 303
PE+ P + YVGNLS +VT + + F + C V + + FV + H A
Sbjct: 5 PEHLPLVSFRYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEHRHA 64
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPT 329
A ++ N R + GK +K +W + PT
Sbjct: 65 AASLAAMNGRKIMGKEVKVNWATTPT 90
>gi|126273035|ref|XP_001367894.1| PREDICTED: nucleolysin TIAR isoform 2 [Monodelphis domestica]
Length = 371
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 176/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 3 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 123 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + +K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 183 QENSTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 276
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 94
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 95 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 147
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 148 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 182
>gi|54303906|gb|AAV33303.1| aging-associated gene 7 protein [Homo sapiens]
Length = 374
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 177/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 184 QENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 95
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 96 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 148
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 149 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 183
>gi|300796220|ref|NP_001179985.1| nucleolysin TIAR [Bos taurus]
gi|296472594|tpg|DAA14709.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Bos taurus]
Length = 380
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/288 (41%), Positives = 177/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 184 QENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 95
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 96 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 148
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 149 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 183
>gi|432884715|ref|XP_004074554.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oryzias latipes]
Length = 386
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 168/285 (58%), Gaps = 17/285 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ E+F GP + CK+I Y FV++++ R A I +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F+ F SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +SS S
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSS 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G +++ +T + + F G I ++
Sbjct: 187 KQL--------SFDEVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
RV +KG+ FVR+++H AA AI N + G +KC WG + T
Sbjct: 233 RVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETT 277
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 40/207 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + F C +++ D T + FV F A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +
Sbjct: 67 NGRKILGKEVKVNWAT---TPTSQKKDTSS---------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPF--GKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSS 335
+ L G+ I+ +W ++ P T++
Sbjct: 155 QMGGQWLGGRQIRTNWATRKPAPKTTN 181
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S+ V+VG++ P++T ++ F+ G + C+++K YGFV +F++ A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----------ASSQR--------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA +SS++ + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNESSSSKQLSFDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV +G+ FV F + E A AI +NG +
Sbjct: 210 VTTGLTEQIMRQTFSPFGQIMEIRVF------PEKGYSFVRFNSHEAAAHAIVSVNGTSI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGYVVKCYWGKE 275
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
++ Q T+YVGNLS +VT + F + C V + FV + H A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 306 AIQMGNARILCGKPIKCSWGSKPT 329
I N R + GK +K +W + PT
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPT 85
>gi|348507121|ref|XP_003441105.1| PREDICTED: nucleolysin TIAR [Oreochromis niloticus]
Length = 382
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 178/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D + R++YVGN+ VT L+ ++F+ GP + CK+I + S+ Y FV++F+ R AA
Sbjct: 3 DETHPRTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDL+PE+T + F+ F
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLNPEITTEDVRVAFAPFGKI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI +++G+WLG RQIR NWA + +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIINMSGQWLGGRQIRTNWATRKPPAPKST 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + SK Q + ++ +++PQ TVY G + S ++ + + F G
Sbjct: 183 QDNGSK------------QLRFDDVVNQSSPQNCTVYCGGIQSGLSEHLMRQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +VRV +KG+ F+R+S+H AA AI N ++ G +KC WG +
Sbjct: 229 QIMEVRVFPEKGYSFIRFSSHDSAAHAIVSVNGTVIEGHVVKCFWGKE 276
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG+++P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 91 DTSNHFHVFVGDLNPEITTEDVRVAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDA 150
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI+ ++G+ + G+ I+ NWA + + + + V+ G
Sbjct: 151 ENAIINMSGQWLGGRQIRTNWATRKPPAPKSTQDNGSKQLRFDDVVNQSSPQNCTVYCGG 210
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+ +++ + FS F + RV +G+ F+ F + + A AI +NG +
Sbjct: 211 IQSGLSEHLMRQTFSPFGQIMEVRVF------PEKGYSFIRFSSHDSAAHAIVSVNGTVI 264
Query: 200 GNRQIRCNWAAKGATSGDEKQSSD 223
++C W + Q D
Sbjct: 265 EGHVVKCFWGKESPDMAKSPQQVD 288
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 95/208 (45%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + F+ C +++ + + + FV F DA +A+ +
Sbjct: 10 LYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFFEHRDAAAALAAM 67
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 68 NGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 97
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+L+ E+T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 98 VFVGDLNPEITTEDVRVAFAPF--GKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAII 155
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + L G+ I+ +W ++ PP ST
Sbjct: 156 NMSGQWLGGRQIRTNWATR-KPPAPKST 182
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
T+YVGNLS +VT + + + F + C + + FV + H +AA A+ N
Sbjct: 9 TLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEHTSNDPYCFVEFFEHRDAAAALAAMN 68
Query: 312 ARILCGKPIKCSWGSKPT 329
R + GK +K +W + P+
Sbjct: 69 GRKILGKEVKVNWATTPS 86
>gi|70995622|ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|66850201|gb|EAL90528.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus Af293]
gi|159131321|gb|EDP56434.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus fumigatus A1163]
Length = 489
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/305 (40%), Positives = 176/305 (57%), Gaps = 31/305 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R++YVG + P+VT +L+++F +TG ++ K+I D D +A L ++TL
Sbjct: 91 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP---------DKNDTITALLNLMTLVR 141
Query: 108 RHIFGQP------------IKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACF 153
+P I+VNWAY S + +EDTS HF++FVGDLS EV D L F
Sbjct: 142 LRGLCKPSTAVESISRYAEIRVNWAYQSNSANKEDTSSHFHIFVGDLSNEVNDEILLQAF 201
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKG 212
S F + S+ARVMWD KTGRSRG+GFV+FR + DA+ A+N ++G+WLG+R IRCNWA KG
Sbjct: 202 SAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALNAMDGEWLGSRAIRCNWANQKG 261
Query: 213 ATSGDEKQSSDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSV 267
S ++Q+ + + T + +S + + PQ+ TT YVGNL+ T
Sbjct: 262 QPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQN 321
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DL FH G + + R+Q D+GF F++ TH AA+AI N + G+P+KCSWG
Sbjct: 322 DLVPLFHNF--GYVLETRLQADRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKD 379
Query: 328 PTPPG 332
P G
Sbjct: 380 RPPTG 384
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 176 DTSSHFHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 235
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSG------------HF-------- 133
A+ ++G + + I+ NWA + SQ++ + HF
Sbjct: 236 EKALNAMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 295
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R+ D RGF F+
Sbjct: 296 DMVVQQTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQAD------RGFAFIKM 349
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 350 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 384
>gi|410900508|ref|XP_003963738.1| PREDICTED: nucleolysin TIAR-like isoform 3 [Takifugu rubripes]
Length = 395
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 173/288 (60%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
+ S +++YVGN+ VT L+ ++FS GP + CK+I SS Y FV++ D + AA
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A T+N R I G+ +KVNWA + S Q++DTS HF+VFVGDLSP++T + A F+ F
Sbjct: 63 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI+ + G+WL RQIR NWA + +
Sbjct: 123 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + SK + K ++ +++P TVY G + S +T + + F G
Sbjct: 183 QDNGSKHL------------KFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV DKG+ FVR+S+H AA AI N ++ G +KC WG +
Sbjct: 229 QIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKE 276
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 40/202 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + FS C +++ D + S + FV F + +DA SA +
Sbjct: 10 LYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARATM 67
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + + ++++ NWA + S +K +S+ +
Sbjct: 68 NKRKILGKEVKVNWAT--SPSCQKKDTSN----------------------------HFH 97
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS ++T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 98 VFVGDLSPDITTEDIRAAFAPF--GHISDARVLKDMATGKSKGYGFVSFYNKLDAENAIS 155
Query: 309 MGNARILCGKPIKCSWGSKPTP 330
+ L G+ I+ +W ++ P
Sbjct: 156 KMAGQWLQGRQIRTNWATRKPP 177
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T L+Q+ FS G + ++ DK Y FV + SAA AIV++NG
Sbjct: 205 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFP-DKG-YSFVRFSSHDSAAHAIVSVNGT 262
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNV 135
I G +K W S + S +V
Sbjct: 263 VIEGNLVKCFWGKESPDMQKNSQQVSV 289
>gi|410900504|ref|XP_003963736.1| PREDICTED: nucleolysin TIAR-like isoform 1 [Takifugu rubripes]
Length = 386
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 173/288 (60%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
+ S +++YVGN+ VT L+ ++FS GP + CK+I SS Y FV++ D + AA
Sbjct: 5 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTSSDPYCFVEFVDHKDAAS 64
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A T+N R I G+ +KVNWA + S Q++DTS HF+VFVGDLSP++T + A F+ F
Sbjct: 65 ARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHVFVGDLSPDITTEDIRAAFAPFGHI 124
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI+ + G+WL RQIR NWA + +
Sbjct: 125 SDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPPAPKSF 184
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + SK + K ++ +++P TVY G + S +T + + F G
Sbjct: 185 QDNGSKHL------------KFDDIVTQSSPHNCTVYCGGIQSGLTEHLMQQTFSPF--G 230
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV DKG+ FVR+S+H AA AI N ++ G +KC WG +
Sbjct: 231 QIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVIEGNLVKCFWGKE 278
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 40/202 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + FS C +++ D + S + FV F + +DA SA +
Sbjct: 12 LYVGNLSRDVTEILILQLFSQIGPCKSCKMITDHTS--SDPYCFVEFVDHKDAASARATM 69
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + + ++++ NWA + S +K +S+ +
Sbjct: 70 NKRKILGKEVKVNWAT--SPSCQKKDTSN----------------------------HFH 99
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS ++T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 100 VFVGDLSPDITTEDIRAAFAPF--GHISDARVLKDMATGKSKGYGFVSFYNKLDAENAIS 157
Query: 309 MGNARILCGKPIKCSWGSKPTP 330
+ L G+ I+ +W ++ P
Sbjct: 158 KMAGQWLQGRQIRTNWATRKPP 179
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T L+Q+ FS G + ++ DK Y FV + SAA AIV++NG
Sbjct: 207 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFP-DKG-YSFVRFSSHDSAAHAIVSVNGT 264
Query: 109 HIFGQPIKVNWAYASSQREDTS 130
I G +K W S + S
Sbjct: 265 VIEGNLVKCFWGKESPDMQKNS 286
>gi|41055734|ref|NP_956476.1| TIA1 cytotoxic granule-associated RNA binding protein 1 [Danio
rerio]
gi|28277744|gb|AAH45485.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
gi|44890544|gb|AAH66734.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 180/306 (58%), Gaps = 23/306 (7%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAA 99
D R++YVGN+ VT AL+ +VFS GP + CK+I + Y FV++++ R AA
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAA 62
Query: 100 LAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE++ + A F+ F
Sbjct: 63 AALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGK 122
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT---S 215
SDARV+ D TG+S+G+GF+SF N+ DA+SAI +NG+WLG RQIR NWA + + S
Sbjct: 123 ISDARVVKDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+E SS S E+ N +++P TVY G ++S ++ + + F
Sbjct: 183 NNEGASSKHLSYEEVLN--------------QSSPSNCTVYCGGIASGLSDQLMRQTFSP 228
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
G I ++RV +KG+ FVR+ +H AA AI N + G +KC WG K T S
Sbjct: 229 F--GQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWG-KETADMRSM 285
Query: 336 TPLPPP 341
+P P
Sbjct: 286 QQMPMP 291
>gi|37681959|gb|AAQ97857.1| TIA1 cytotoxic granule-associated RNA binding protein [Danio rerio]
gi|160773363|gb|AAI55270.1| Cytotoxic granule-associated RNA binding protein 1, like [Danio
rerio]
Length = 342
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 126/306 (41%), Positives = 180/306 (58%), Gaps = 23/306 (7%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAA 99
D R++YVGN+ VT AL+ +VFS GP + CK+I + Y FV++++ R AA
Sbjct: 3 MDEDQPRTLYVGNLSRDVTEALILQVFSQIGPCKSCKMILDTTGNDPYCFVEFYENRHAA 62
Query: 100 LAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE++ + A F+ F
Sbjct: 63 AALAAMNGRKILGKDMKVNWASTPSSQKKDTSNHFHVFVGDLSPEISTDDVRAAFAPFGK 122
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT---S 215
SDARV+ D TG+S+G+GF+SF N+ DA+SAI +NG+WLG RQIR NWA + + S
Sbjct: 123 ISDARVVRDLATGKSKGYGFISFINKWDAESAIQQMNGQWLGGRQIRTNWATRKPSAPKS 182
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+E SS S E+ N +++P TVY G ++S ++ + + F
Sbjct: 183 NNEGASSKHLSYEEVLN--------------QSSPSNCTVYCGGIASGLSDQLMRQTFSP 228
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
G I ++RV +KG+ FVR+ +H AA AI N + G +KC WG K T S
Sbjct: 229 F--GQIMEIRVFPEKGYSFVRFDSHEGAAHAIVSVNGTCIEGHTVKCYWG-KETADMRSM 285
Query: 336 TPLPPP 341
+P P
Sbjct: 286 QQMPMP 291
>gi|426223384|ref|XP_004005855.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Ovis aries]
Length = 375
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 172/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|148666754|gb|EDK99170.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_d
[Mus musculus]
Length = 385
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 173/285 (60%), Gaps = 19/285 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++YVGN+ VT AL+ ++FS GP + CK+I +++ Y FV++ + R AA A+
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 74
Query: 104 TLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
+NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDA
Sbjct: 75 AMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 134
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S
Sbjct: 135 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYES 194
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
++K Q +E +++P TVY G ++S +T + + F G I
Sbjct: 195 NTK------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIM 240
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
++RV DKG+ FVR+S+H AA AI N + G +KC WG +
Sbjct: 241 EIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 285
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D +T + + FV F A +A+ +
Sbjct: 17 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 76
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 77 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 106
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 164
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 165 QMGGQWLGGRQIRTNWATR-KPPAPKST 191
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 100 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 159
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 160 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 219
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 220 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTI 273
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 274 EGHVVKCYWGKE 285
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHAL--C--VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F + C I DVR + + FV + H AA A+
Sbjct: 16 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 75
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 76 MNGRKIMGKEVKVNWATTPS 95
>gi|301758210|ref|XP_002914948.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2 [Ailuropoda
melanoleuca]
gi|410954993|ref|XP_003984143.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Felis catus]
Length = 375
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 172/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|158255914|dbj|BAF83928.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 176/288 (61%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKI 123
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ D ++AI + G+WLG RQIR NWA + +
Sbjct: 124 SDARVVKDMATGKSKGYGFVSFYNKLDGENAIVHMGGQWLGGRQIRTNWATRKPPAPKST 183
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K + ++ N+ +P+N TVY G ++S +T + + F G
Sbjct: 184 QENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 95
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 96 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 148
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+ AI + L G+ I+ +W ++ PP ST
Sbjct: 149 LDGENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 183
>gi|255760009|ref|NP_001157550.1| nucleolysin TIA-1 isoform 2 [Mus musculus]
gi|28386187|gb|AAH46812.1| Tia1 protein [Mus musculus]
Length = 377
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 173/285 (60%), Gaps = 19/285 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++YVGN+ VT AL+ ++FS GP + CK+I +++ Y FV++ + R AA A+
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 104 TLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
+NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDA
Sbjct: 67 AMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDA 126
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
RV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S
Sbjct: 127 RVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYES 186
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
++K Q +E +++P TVY G ++S +T + + F G I
Sbjct: 187 NTK------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIM 232
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
++RV DKG+ FVR+S+H AA AI N + G +KC WG +
Sbjct: 233 EIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 39/208 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D +T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 69 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 98
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 156
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 157 QMGGQWLGGRQIRTNWATR-KPPAPKST 183
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 92 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 151
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 152 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 211
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 212 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTI 265
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 266 EGHVVKCYWGKE 277
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHAL--C--VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F + C I DVR + + FV + H AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 67
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 68 MNGRKIMGKEVKVNWATTPS 87
>gi|344283909|ref|XP_003413713.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Loxodonta
africana]
Length = 375
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 172/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQL--------SYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|148666756|gb|EDK99172.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_f
[Mus musculus]
Length = 375
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 171/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K Q +E +++P TVY G ++S +T + + F G I ++
Sbjct: 187 K------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+S+H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|45361397|ref|NP_989276.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
gi|39795756|gb|AAH64164.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 386
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 177/314 (56%), Gaps = 35/314 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VFS GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++D + HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + +E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLTY--------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP-- 331
G I +VRV DKG+ FVR+S+H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG-KETPDML 291
Query: 332 ----GTSSTPLPPP 341
S PPP
Sbjct: 292 NPVQQASQISFPPP 305
>gi|89272716|emb|CAJ83609.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
(Silurana) tropicalis]
Length = 389
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 173/297 (58%), Gaps = 29/297 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VFS GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++D + HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + +E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLTY--------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I +VRV DKG+ FVR+S+H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 288
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + FS C +++ D T + + FV F A +++ +
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ ++S SVV ++D +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDANSSSVVSTLR---------SQD-------HFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPF--GRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIA 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|449506038|ref|XP_002188262.2| PREDICTED: nucleolysin TIAR [Taeniopygia guttata]
Length = 453
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 173/280 (61%), Gaps = 17/280 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +NGR
Sbjct: 93 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 152
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D
Sbjct: 153 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 212
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K +
Sbjct: 213 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 272
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
++ N+ +P+N TVY G ++S +T + + F G I ++RV
Sbjct: 273 --------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVF 318
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 319 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 358
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 173 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 232
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 233 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 292
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 293 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 346
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 347 EGHVVKCYWGKE 358
>gi|147902038|ref|NP_001087561.1| TIA1 cytotoxic granule-associated RNA binding protein [Xenopus
laevis]
gi|51261513|gb|AAH80105.1| MGC84540 protein [Xenopus laevis]
Length = 389
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 173/297 (58%), Gaps = 29/297 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ +VFS GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 7 RTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++D + HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEITTDDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + +E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNAKQLTY--------EEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I +VRV DKG+ FVR+S+H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 288
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + FS C +++ D T + + FV F A +++ +
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ ++S SVV ++D +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDANSSSVVSTLR---------SQD-------HFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 108 VFVGDLSPEITTDDIKAAFAPF--GRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIA 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|291404907|ref|XP_002718787.1| PREDICTED: TIA-1 related protein-like [Oryctolagus cuniculus]
Length = 450
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 173/280 (61%), Gaps = 17/280 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +NGR
Sbjct: 87 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 146
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D
Sbjct: 147 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 206
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K +
Sbjct: 207 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 266
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
++ N+ +P+N TVY G ++S +T + + F G I ++RV
Sbjct: 267 --------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVF 312
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 313 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 352
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 167 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 226
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 227 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 286
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 287 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 340
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 341 EGHVVKCYWGKE 352
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
E P + YVGNLS +VT V + + F + C + + FV + H +AA
Sbjct: 78 ETRPGASPRYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 137
Query: 305 LAIQMGNARILCGKPIKCSWGSKPT 329
A+ N R + GK +K +W + P+
Sbjct: 138 AALAAMNGRKILGKEVKVNWATTPS 162
>gi|348542282|ref|XP_003458614.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Oreochromis
niloticus]
Length = 386
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 169/285 (59%), Gaps = 17/285 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ E+F GP + CK+I Y FV++++ R A I +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F+ F SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +++++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTSETTNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K Q +E +++P TVY G +++ +T + + F G I ++
Sbjct: 187 K------------QLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
RV +KG+ FVR+++H AA AI N + G +KC WG + T
Sbjct: 233 RVFPEKGYSFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETT 277
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 41/209 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + F C +++ D T + FV F A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +
Sbjct: 67 NGRKILGKEVKVNWAT---TPTSQKKDTSS---------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTDDIKAAFAPF--GKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGS-KPTPPGTSST 336
+ L G+ I+ +W + KP P TS T
Sbjct: 155 QMGGQWLGGRQIRTNWATRKPAPKTTSET 183
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S+ V+VG++ P++T ++ F+ G + C+++K YGFV +F++ A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFAPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN-------------------VFVGD 139
AI + G+ + G+ I+ NWA + TS N V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTSETTNTKQLSFDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV +G+ FV F + E A AI +NG +
Sbjct: 210 VTTGLTEQIMRQTFSPFGQIMEIRVF------PEKGYSFVRFNSHEAAAHAIVSVNGTSI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGYVVKCYWGKE 275
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
++ Q T+YVGNLS +VT + F + C V + FV + H A
Sbjct: 2 DDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 306 AIQMGNARILCGKPIKCSWGSKPT 329
I N R + GK +K +W + PT
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPT 85
>gi|58865762|ref|NP_001012096.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|56268852|gb|AAH87064.1| TIA1 cytotoxic granule-associated RNA binding protein [Rattus
norvegicus]
gi|149036619|gb|EDL91237.1| rCG56007, isoform CRA_c [Rattus norvegicus]
Length = 375
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 171/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K Q +E +++P TVY G ++S +T + + F G I ++
Sbjct: 187 K------------QLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ F+R+S+H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + G+ V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPGNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ F+ F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFIRFSSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/301 (39%), Positives = 168/301 (55%), Gaps = 31/301 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----------YGFVDYFDRRS 97
R++YVG + P+VT +L+++F +TG ++ K+I +S YGFV+Y D +
Sbjct: 83 RALYVGGLDPRVTEDVLRQIFETTGHVQSVKIIPDKTASSPSFNSKGFNYGFVEYDDPGA 142
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
A + TLNGR I EDTS HF++FVGDLS EV D L FS F
Sbjct: 143 AERGMATLNGRRI-------------HNNEDTSNHFHIFVGDLSNEVNDEVLLQAFSTFG 189
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSG 216
S+ARVMWD KTGRSRG+GFV+FR++ DA A++ ++G+WLG+R IRCNWA KG S
Sbjct: 190 PVSEARVMWDMKTGRSRGYGFVAFRDRADADRALSSMDGEWLGSRAIRCNWANQKGQPSI 249
Query: 217 DEKQSSDSKSVVELT-----NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
++Q+ S + T + + G + + + TT YVGNL+ + DL
Sbjct: 250 SQQQAMASMGMTPTTPFGHHHFPTHGVQSYDMVVAQTPAWQTTCYVGNLTPYTSQSDLVP 309
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG P
Sbjct: 310 LFQNF--GYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPT 367
Query: 332 G 332
G
Sbjct: 368 G 368
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ GP+ +++ K+ YGFV + DR A
Sbjct: 160 DTSNHFHIFVGDLSNEVNDEVLLQAFSTFGPVSEARVMWDMKTGRSRGYGFVAFRDRADA 219
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 220 DRALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMASMGMTPTTPFGHHHFPTHGVQSY 279
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P + + L F F ++ R D RGF F+
Sbjct: 280 DMVVAQTPAWQTTCYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSD------RGFAFIKM 333
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 334 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 368
>gi|296223620|ref|XP_002757701.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Callithrix
jacchus]
gi|403260488|ref|XP_003922703.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 375
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 171/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|380816028|gb|AFE79888.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
gi|383421175|gb|AFH33801.1| nucleolysin TIA-1 isoform p40 isoform 1 [Macaca mulatta]
Length = 375
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 171/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|417410125|gb|JAA51540.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 367
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/280 (41%), Positives = 173/280 (61%), Gaps = 17/280 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +NGR
Sbjct: 3 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 62
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D
Sbjct: 63 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 122
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K +
Sbjct: 123 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 182
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
++ N+ +P+N TVY G ++S +T + + F G I ++RV
Sbjct: 183 --------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVF 228
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 268
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 83 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 142
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 143 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 202
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 203 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 256
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 257 EGHVVKCYWGKE 268
>gi|188219593|ref|NP_071320.2| nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]
gi|114577932|ref|XP_001141475.1| PREDICTED: uncharacterized protein LOC459303 isoform 1 [Pan
troglodytes]
gi|397521826|ref|XP_003830987.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Pan paniscus]
gi|119620229|gb|EAW99823.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_a [Homo sapiens]
gi|410254976|gb|JAA15455.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298558|gb|JAA27879.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353837|gb|JAA43522.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 375
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 171/283 (60%), Gaps = 17/283 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + E N+ +P N TVY G ++S +T + + F G I ++
Sbjct: 187 KQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 233 RVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 275
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 41/208 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA S +K +S+ +
Sbjct: 67 NGRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 155 QMGGQWLGGRQIRTNWATR-KPPAPKST 181
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGHVVKCYWGKE 275
>gi|291386623|ref|XP_002709696.1| PREDICTED: TIA1 cytotoxic granule-associated RNA binding
protein-like [Oryctolagus cuniculus]
Length = 386
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 172/290 (59%), Gaps = 19/290 (6%)
Query: 43 DASTC--RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSA 98
D TC + YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R A
Sbjct: 11 DVHTCVRNAGYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHA 70
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
A A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 71 AAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFG 130
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 131 RISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPK 190
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 191 STYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF- 237
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 238 -GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 41/207 (19%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +N
Sbjct: 21 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 78
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA S +K +S+ + V
Sbjct: 79 GRKIMGKEVKVNWAT--TPSSQKKDTSN----------------------------HFHV 108
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 109 FVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 166
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 167 MGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|226290334|gb|EEH45818.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Paracoccidioides brasiliensis Pb18]
Length = 508
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 167/291 (57%), Gaps = 27/291 (9%)
Query: 67 VFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLNGR--------------H 109
+F +TG ++ K+I S +YGFV+Y D +A A+ TLNGR H
Sbjct: 103 IFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPH 162
Query: 110 IFGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
Q I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F + S+ARVMWD
Sbjct: 163 PLQQEIRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWD 222
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDSKS 226
KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ +
Sbjct: 223 MKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMG 282
Query: 227 VVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ T + +S + PQ+ TT YVGNL+ T DL F G +
Sbjct: 283 MTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF--GYV 340
Query: 282 EDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
+ R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P G
Sbjct: 341 VETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 391
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 183 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 242
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA + SQ++ + HF
Sbjct: 243 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 302
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 303 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 356
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI L+G + R ++C+W +G
Sbjct: 357 DTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 391
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 51/186 (27%)
Query: 169 KTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN--------------RQIRCNWAAKGAT 214
K + +GFV + + A+ A+ LNG+ + ++IR NWA +
Sbjct: 119 KNSKGLNYGFVEYDDPGAAERAMATLNGRRVHQSNYDIRSLKPHPLQQEIRVNWAYQ--- 175
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
SN + E+ + ++VG+LS+EV L + F
Sbjct: 176 --------------------------SNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFS 209
Query: 275 ALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
A G++ + RV R +G+GFV + +A A+ + L + I+C+W ++
Sbjct: 210 AF--GSVSEARVMWDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQK 267
Query: 329 TPPGTS 334
P S
Sbjct: 268 GQPSIS 273
>gi|301759213|ref|XP_002915456.1| PREDICTED: nucleolysin TIAR-like [Ailuropoda melanoleuca]
Length = 477
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 121/290 (41%), Positives = 178/290 (61%), Gaps = 18/290 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
S YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +N
Sbjct: 112 SGYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMN 171
Query: 107 GRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
GR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+
Sbjct: 172 GRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVV 231
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSK 225
D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K
Sbjct: 232 KDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK 291
Query: 226 SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVR 285
+ ++ N+ +P+N TVY G ++S +T + + F G I ++R
Sbjct: 292 QL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIR 337
Query: 286 VQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
V +KG+ FVR+STH AA AI N + G +KC WG K +P T +
Sbjct: 338 VFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG-KESPDMTKN 386
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 194 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 253
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 254 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 313
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 314 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 367
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 368 EGHVVKCYWGKE 379
>gi|308321266|gb|ADO27785.1| nucleolysin tiar [Ictalurus furcatus]
Length = 374
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 17/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D S +++YVGN+ VT L+ ++F+ GP + CK+I + S+ Y FV++++ R AA
Sbjct: 3 DESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGKI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 123 SDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKNT 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + K Q + + +++PQ TVY G + S ++ + + F G
Sbjct: 183 QDASPK------------QLRYEDVVNQSSPQNCTVYCGGIQSGLSDHLMRQTFSPF--G 228
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +KG+ F+R+S+H AA AI N + G +KC WG +
Sbjct: 229 QIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTTIEGHIVKCYWGKE 276
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 40/210 (19%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED S ++VG+LS +VT+ + F+ C +++ + + + FV F D
Sbjct: 2 EDESHPKTLYVGNLSRDVTENLILQLFTQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN----------------------- 94
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 95 -----HFHVFVGDLSPEITTDDIRAAFAPF--GKISDARVVKDMTTGKSKGYGFVSFYNK 147
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTP 330
+A AI + L G+ I+ +W ++ P
Sbjct: 148 LDAENAIVHMGGQWLGGRQIRTNWATRKPP 177
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +++ L+++ FS G + ++ + Y F+ + SAA AIV++NG
Sbjct: 205 TVYCGGIQSGLSDHLMRQTFSPFGQIMEIRVFPE--KGYSFIRFSSHESAAHAIVSVNGT 262
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 263 TIEGHIVKCYWGKES 277
>gi|449267712|gb|EMC78625.1| Nucleolysin TIA-1 isoform p40, partial [Columba livia]
Length = 361
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 169/283 (59%), Gaps = 18/283 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV+ D
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKD 120
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA ++ KS
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAPKST 172
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
E E N+ +P N TVY G ++S +T + + F G I ++RV
Sbjct: 173 YEANTKQLSYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF--GQIMEIRVF 226
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
DKG+ FVR+++H AA AI N + G +KC WG K TP
Sbjct: 227 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHIVKCYWG-KETP 268
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 81 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 140
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 141 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYEANTKQLSYDEVVNQSSPSNCTVYCGG 200
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 201 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTI 254
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 255 EGHIVKCYWGKE 266
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/301 (38%), Positives = 174/301 (57%), Gaps = 19/301 (6%)
Query: 34 LSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVD 91
+ G +P D S R++YVGN+ QVT L+ ++F + GP + CK+I + + Y FV+
Sbjct: 100 MVGLIPSMEDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDPYCFVE 159
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
++D A+ A+ +NGR I + +KVNWA S ++DTS H +VFVGDLSPE+ L
Sbjct: 160 FYDHNHASAALTAMNGRKIMHKEVKVNWATTPSGNKKDTSNHHHVFVGDLSPEIDTTDLK 219
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A F+ F SDARV+ D +T +SRG+GFVSF N+ DA++AI ++G+WLG R IR NWA
Sbjct: 220 AAFAPFGKISDARVVRDAQTAKSRGYGFVSFVNKVDAENAIGAMSGQWLGGRAIRTNWAT 279
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + S E+ S P TTVY G ++ +T DL
Sbjct: 280 RKPPPPKSNEGQKQLSYDEVLCQAS--------------PTNTTVYCGGITKGLTE-DLM 324
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
R+ + G I+++RV +KG+ F+R+ +H AA+AI N + G+ +KCSWG + +
Sbjct: 325 RNTFS-NFGPIQEIRVFPEKGYSFIRFFSHEVAAMAIVTVNGTQIEGQAVKCSWGKESSD 383
Query: 331 P 331
P
Sbjct: 384 P 384
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 40/215 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED S ++VG+LS +VT+ + F C +++ + + FV F +
Sbjct: 108 EDESRPRTLYVGNLSRQVTEQLILQLFGAIGPCKSCKMISEHAGNDP--YCFVEFYDHNH 165
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + +++++ NWA SG++K +S+
Sbjct: 166 ASAALTAMNGRKIMHKEVKVNWAT--TPSGNKKDTSN----------------------- 200
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+ + DL F G I D RV RD +G+GFV +
Sbjct: 201 -----HHHVFVGDLSPEIDTTDLKAAFAPF--GKISDARVVRDAQTAKSRGYGFVSFVNK 253
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
+A AI + + L G+ I+ +W ++ PP S+
Sbjct: 254 VDAENAIGAMSGQWLGGRAIRTNWATRKPPPPKSN 288
>gi|326936530|ref|XP_003214306.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Meleagris gallopavo]
Length = 423
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/294 (40%), Positives = 171/294 (58%), Gaps = 29/294 (9%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +NGR
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAASALAAMNGR 109
Query: 109 HIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVF 156
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 110 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQASQDHFHVFVGDLSPEITTEDIKAAFAPF 169
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 170 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 229
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S++K + + N+ +P N TVY G ++S +T + + F
Sbjct: 230 KSTYESNTKQL--------SYDDVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF 277
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG K TP
Sbjct: 278 --GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 328
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 30/207 (14%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A SA+ +N
Sbjct: 50 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAASALAAMN 107
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA T +K+ + S +VV ++++D + V
Sbjct: 108 GRKIMGKEVKVNWAT---TPSSQKKDTSSSTVVST---------QASQD-------HFHV 148
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 149 FVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 206
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 207 MGGQWLGGRQIRTNWATR-KPPAPKST 232
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTL 105
V+VG++ P++T ++ F+ G + +++K YGFV +F++ A AI +
Sbjct: 148 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 207
Query: 106 NGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGDLSPEVTD 146
G+ + G+ I+ NWA Y S+ + + + + V+ G ++ +T+
Sbjct: 208 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTVYCGGVTSGLTE 267
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
+ FS F + RV D +G+ FV F + E A AI +NG + ++C
Sbjct: 268 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 321
Query: 207 NWAAK 211
W +
Sbjct: 322 YWGKE 326
>gi|154269845|ref|XP_001535826.1| hypothetical protein HCAG_09244 [Ajellomyces capsulatus NAm1]
gi|150409464|gb|EDN04912.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 387
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 167/279 (59%), Gaps = 19/279 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
R++Y+G + +VT +L+++F +TG ++ K+I S +YGFV+Y D +A A+ T
Sbjct: 92 RALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAERAMST 151
Query: 105 LNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNGR + I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F + S+A
Sbjct: 152 LNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEA 211
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQS 221
RVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+
Sbjct: 212 RVMWDMKTGRSRGYGFVAFRERPDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQA 271
Query: 222 SDSKSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHAL 276
+ + T + +S + PQ+ TT YVGNL+ T DL F
Sbjct: 272 MAAMGMTPSTPFGHHHFPTHGVQSYDMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF 331
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTH------PEAALAIQM 309
G + + R Q D+GF FV+ TH P A LA M
Sbjct: 332 --GYVVETRFQTDRGFRFVKMDTHEKCCHGPSANLAATM 368
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 38/206 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++G L VT+ L F +++ D K + +GFV + + A+ A++ L
Sbjct: 94 LYIGGLDARVTEDILRQIFETTGHVQSVKIIPD-KNSKGLNYGFVEYDDPGAAERAMSTL 152
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +IR NWA + SN + E+ +
Sbjct: 153 NGRRVHQSEIRVNWAYQ-----------------------------SNNNNKEDTSNHFH 183
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQ 308
++VG+LS+EV L + F A G++ + RV R +G+GFV + P+A A+
Sbjct: 184 IFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKALS 241
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTS 334
+ L + I+C+W ++ P S
Sbjct: 242 SMDGEWLGSRAIRCNWANQKGQPSIS 267
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 47/184 (25%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 177 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 236
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSG------------HF-------- 133
A+ +++G + + I+ NWA + SQ++ + HF
Sbjct: 237 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPSTPFGHHHFPTHGVQSY 296
Query: 134 ------------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 297 DMVAAQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQTD------RGFRFVKM 350
Query: 182 RNQE 185
E
Sbjct: 351 DTHE 354
>gi|431895395|gb|ELK04911.1| Nucleolysin TIAR [Pteropus alecto]
Length = 428
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 184/326 (56%), Gaps = 36/326 (11%)
Query: 24 LLAAPQIEPILSG--NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
L A ++P L +LP + + + YVGN+ VT L+ ++FS GP + CK+I
Sbjct: 19 LAVALYLKPNLMNEFHLPTTYSSFLPKEEYVGNLSRDVTEVLILQLFSQIGPCKSCKMIT 78
Query: 82 KDKSS-------------------YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA 122
+ S Y FV++++ R AA A+ +NGR I G+ +KVNWA
Sbjct: 79 EQPDSRRVNSSVGFSVLQHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT 138
Query: 123 -SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D TG+S+G+GFVSF
Sbjct: 139 PSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSF 198
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
N+ DA++AI + G+WLG RQIR NWA + + Q +++K + ++
Sbjct: 199 YNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL--------RFEDVV 250
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHP 301
N+ +P+N TVY G ++S +T + + F G I ++RV +KG+ FVR+STH
Sbjct: 251 NQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHE 304
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
AA AI N + G +KC WG +
Sbjct: 305 SAAHAIVSVNGTAIEGHVVKCYWGKE 330
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 171/298 (57%), Gaps = 19/298 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D + R++YVGN+ QVT A + ++F GP + CK+I + + Y FV++ + AA
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
A+ T+NGR I G+ +KVNWA SS ++DTS H +VFVGDLS EV L A F+ F
Sbjct: 69 ALQTMNGRMILGKEVKVNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQI 128
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
SDARV+ D +T +S+G+GFVSF N+ DA++AI +NG+WL R IR NWA + +
Sbjct: 129 SDARVVKDLQTNKSKGYGFVSFLNKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQP 188
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+++ S ++ N S TTVY+G +++ +T + F G
Sbjct: 189 ETTKQLSYDDVCNSSSYTN--------------TTVYIGGVTTGLTEGKMRETFSHY--G 232
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
I++VR+ DKG+ F+R+ TH AA AI N + G +KCSWG + + P + P
Sbjct: 233 HIQEVRIFPDKGYAFIRFMTHESAAHAIVSVNGSQINGHMVKCSWGKESSDPLYQAQP 290
>gi|45383446|ref|NP_989687.1| nucleolysin TIAR isoform 1 [Gallus gallus]
gi|28883275|gb|AAO49721.1| TIAR [Gallus gallus]
Length = 388
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 176/305 (57%), Gaps = 34/305 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 3 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHTS 62
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 63 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 122
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 123 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 182
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G ++S
Sbjct: 183 QIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 230
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 231 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 288
Query: 323 SWGSK 327
WG +
Sbjct: 289 YWGKE 293
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR----GFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R GF
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSSRRVNSVGFSVLQHT 61
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 199
>gi|6678349|ref|NP_033409.1| nucleolysin TIAR [Mus musculus]
gi|61557246|ref|NP_001013211.1| nucleolysin TIAR [Rattus norvegicus]
gi|2500589|sp|P70318.1|TIAR_MOUSE RecName: Full=Nucleolysin TIAR; AltName: Full=TIA-1-related protein
gi|1592563|gb|AAC52870.1| RNA binding protein TIAR [Mus musculus]
gi|12848609|dbj|BAB28019.1| unnamed protein product [Mus musculus]
gi|60552455|gb|AAH91409.1| Tia1 cytotoxic granule-associated RNA binding protein-like 1
[Rattus norvegicus]
gi|148685702|gb|EDL17649.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Mus musculus]
gi|149067621|gb|EDM17173.1| Tial1 cytotoxic granule-associated RNA binding protein-like 1
(mapped), isoform CRA_a [Rattus norvegicus]
Length = 392
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 176/305 (57%), Gaps = 34/305 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 123
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 124 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 183
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G ++S
Sbjct: 184 QIRTNWATRKPPAPKSTQETNTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 231
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 232 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 289
Query: 323 SWGSK 327
WG +
Sbjct: 290 YWGKE 294
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 112
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 113 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 150
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 151 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 200
>gi|89272470|emb|CAJ83096.1| OTTXETP00000006403 [Xenopus (Silurana) tropicalis]
Length = 389
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 179/313 (57%), Gaps = 35/313 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 3 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNTN 62
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 63 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 122
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 123 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 182
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G + S
Sbjct: 183 QIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIGS 230
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ F+R+STH AA AI N + G +KC
Sbjct: 231 GLTEQLMRQTFGVF--GQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKC 288
Query: 323 SWGSKPTPPGTSS 335
WG K TP T +
Sbjct: 289 YWG-KETPDMTKN 300
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG----------- 175
ED ++VG+LS +VT+ + FS C +++ +Q R G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDSRRVGASVSFPVLPNT 61
Query: 176 ----FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
+ FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 NNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 199
>gi|77695912|ref|NP_001029097.1| nucleolysin TIAR isoform 2 [Homo sapiens]
gi|73998714|ref|XP_852319.1| PREDICTED: nucleolysin TIAR isoform 2 [Canis lupus familiaris]
gi|114633030|ref|XP_001154768.1| PREDICTED: nucleolysin TIAR isoform 6 [Pan troglodytes]
gi|311271911|ref|XP_003133244.1| PREDICTED: nucleolysin TIAR isoform 2 [Sus scrofa]
gi|338716472|ref|XP_003363459.1| PREDICTED: nucleolysin TIAR [Equus caballus]
gi|390473251|ref|XP_003734574.1| PREDICTED: nucleolysin TIAR isoform 2 [Callithrix jacchus]
gi|395827973|ref|XP_003787162.1| PREDICTED: nucleolysin TIAR isoform 1 [Otolemur garnettii]
gi|397510639|ref|XP_003825700.1| PREDICTED: nucleolysin TIAR isoform 2 [Pan paniscus]
gi|402881652|ref|XP_003904380.1| PREDICTED: nucleolysin TIAR isoform 2 [Papio anubis]
gi|426253186|ref|XP_004020281.1| PREDICTED: nucleolysin TIAR isoform 2 [Ovis aries]
gi|426366374|ref|XP_004050233.1| PREDICTED: nucleolysin TIAR isoform 2 [Gorilla gorilla gorilla]
gi|158255404|dbj|BAF83673.1| unnamed protein product [Homo sapiens]
gi|380783709|gb|AFE63730.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|383408327|gb|AFH27377.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|384942768|gb|AFI34989.1| nucleolysin TIAR isoform 2 [Macaca mulatta]
gi|410218476|gb|JAA06457.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410257384|gb|JAA16659.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
gi|410296998|gb|JAA27099.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1 [Pan
troglodytes]
Length = 392
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 176/305 (57%), Gaps = 34/305 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 123
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 124 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 183
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G ++S
Sbjct: 184 QIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 231
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 232 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 289
Query: 323 SWGSK 327
WG +
Sbjct: 290 YWGKE 294
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 112
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 113 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 150
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 151 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 200
>gi|351710501|gb|EHB13420.1| Nucleolysin TIAR [Heterocephalus glaber]
Length = 392
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 176/305 (57%), Gaps = 34/305 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 123
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 124 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 183
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G ++S
Sbjct: 184 QIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 231
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 232 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 289
Query: 323 SWGSK 327
WG +
Sbjct: 290 YWGKE 294
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 112
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 113 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 150
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 151 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 200
>gi|126273033|ref|XP_001367857.1| PREDICTED: nucleolysin TIAR isoform 1 [Monodelphis domestica]
Length = 388
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 175/305 (57%), Gaps = 34/305 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 3 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 62
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 63 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 122
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 123 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 182
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q + +K + ++ N+ +P+N TVY G ++S
Sbjct: 183 QIRTNWATRKPPAPKSTQENSTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 230
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 231 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 288
Query: 323 SWGSK 327
WG +
Sbjct: 289 YWGKE 293
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 199
>gi|297307145|ref|NP_001167497.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Xenopus laevis]
gi|50416510|gb|AAH77169.1| Unknown (protein for MGC:78766) [Xenopus laevis]
Length = 385
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 177/314 (56%), Gaps = 35/314 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT L+ +VFS GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++D + HF+VFVGDLSPE++ + A F
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + +E N+ +P N TVY G ++S ++ + + F
Sbjct: 187 PAPKSTFESNAKQLTY--------EEVVNQSSPSN----CTVYCGGVTSGLSEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP-- 331
G I +VRV DKG+ FVR+S+H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG-KETPDML 291
Query: 332 ----GTSSTPLPPP 341
S PPP
Sbjct: 292 NPVQQASQISFPPP 305
>gi|16215606|emb|CAC95018.1| TIA-1 protein [Xenopus laevis]
Length = 388
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 173/297 (58%), Gaps = 29/297 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT L+ +VFS GP + CK+I + Y FV++F+ R AA ++ +
Sbjct: 7 KTLYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMDTAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++D + HF+VFVGDLSPE++ + A F
Sbjct: 67 NGRKILGKEVKVNWATTPSSQKKDANSSSVVSTLRSQDHFHVFVGDLSPEISTDDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIAQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + +E N+ +P N TVY G ++S ++ + + F
Sbjct: 187 PAPKSTFESNAKQLTY--------EEVVNQSSPSN----CTVYCGGVTSGLSEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I +VRV DKG+ FVR+S+H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEVRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 288
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+ + FS C +++ D T + + FV F A +++ +
Sbjct: 9 LYVGNLSRDVTEPLILQVFSQLGPCKSCKMIMD--TAGNDPYCFVEFFEHRHAAASLAAI 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ ++S SVV ++D +
Sbjct: 67 NGRKILGKEVKVNWAT---TPSSQKKDANSSSVVSTLR---------SQD-------HFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+++ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 108 VFVGDLSPEISTDDIKAAFAPF--GRISDARVVKDMTTGKSKGYGFVSFFNKWDAENAIA 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|410929559|ref|XP_003978167.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Takifugu rubripes]
Length = 385
Score = 207 bits (528), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 168/285 (58%), Gaps = 17/285 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ E+F GP + CK+I Y FV++++ R A I +
Sbjct: 7 KTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F F SD RV
Sbjct: 67 NGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + K + +
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR-------KPAPKT 179
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
+ T +S E N+ +P N TVY G +++ +T + + F G I ++
Sbjct: 180 TNETTNTKQLSF-DEVVNQSSPSN----CTVYCGGVTTGLTEQIMRQTFSPF--GHIMEI 232
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
RV DKG+ FVR+++H AA AI N + G +KC WG + T
Sbjct: 233 RVFPDKGYSFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETT 277
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S+ V+VG++ P++T ++ F G + C+++K YGFV +F++ A
Sbjct: 90 DTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA + + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 210 VTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGTTI 263
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 264 EGYVVKCYWGKE 275
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 41/203 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + F C +++ D T + FV F A + I +
Sbjct: 9 LYVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +
Sbjct: 67 NGRKILGKEVKVNWAT---TPTSQKKDTSS---------------------------HFH 96
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 97 VFVGDLSPEITTDDIKAAFGPF--GKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQ 154
Query: 309 MGNARILCGKPIKCSWGS-KPTP 330
+ L G+ I+ +W + KP P
Sbjct: 155 QMGGQWLGGRQIRTNWATRKPAP 177
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
++ Q T+YVGNLS +VT + F + C V + FV + H A
Sbjct: 2 DDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATA 61
Query: 306 AIQMGNARILCGKPIKCSWGSKPT 329
I N R + GK +K +W + PT
Sbjct: 62 TIAAMNGRKILGKEVKVNWATTPT 85
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/307 (38%), Positives = 166/307 (54%), Gaps = 39/307 (12%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALAIV 103
+YVGN+ P+VT+ +L E+F+ GP+ K+I+ D++ +YGFV+Y D RSA AI
Sbjct: 26 LYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQ-DRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
TLNGR IF +K N +EDT H +VFVGDLSPEV D L F F + S+AR
Sbjct: 85 TLNGRKIFDAEVKQN-------KEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEAR 137
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD +G+SRG+GF+SFR +EDA+ AIN +NG+WLG+R IR NWA + +G S
Sbjct: 138 VMWDMNSGKSRGYGFLSFRKREDAEQAINTMNGEWLGSRAIRVNWANQKTQTGSSGAYSS 197
Query: 224 SKSVV-------ELTN----------------GISDGQEKSNEDAPENNPQYTTVYVGNL 260
+LT+ G+ A P T++VGNL
Sbjct: 198 PSYTAPSYGHYPQLTSSPTPAAPIAPLAPVIPGVPPAGGVPAASATPVIPDNCTLFVGNL 257
Query: 261 SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
VT +L F G + D+R+Q D+G+ FV+ T A A+ ++ G+P+
Sbjct: 258 GPYVTQAELTPLFQ--TYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNTMVQGRPL 315
Query: 321 KCSWGSK 327
K WG +
Sbjct: 316 KIQWGRE 322
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 47/208 (22%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR-GFGFVSFRNQEDAQSAIN 192
+++VG+LSP VTD L F+V +A+++ D+ + +GFV + + A+ AI
Sbjct: 25 HLYVGNLSPRVTDYMLTEIFAVAGPVVNAKIIQDRNFQHAGFNYGFVEYIDMRSAEQAIQ 84
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
LNG+ I D + K N+ E+ +
Sbjct: 85 TLNGR-----------------------------------KIFDAEVKQNK---EDTQHH 106
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALA 306
V+VG+LS EV L + F A G++ + RV D +G+GF+ + +A A
Sbjct: 107 HHVFVGDLSPEVNDDVLAKAFGAF--GSMSEARVMWDMNSGKSRGYGFLSFRKREDAEQA 164
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
I N L + I+ +W ++ T G+S
Sbjct: 165 INTMNGEWLGSRAIRVNWANQKTQTGSS 192
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ P VT A L +F + G + ++ + D+ Y FV ++A A+ TL
Sbjct: 251 TLFVGNLGPYVTQAELTPLFQTYGYVTDIRM-QADRG-YAFVKLDTSQAAVSAMATLQNT 308
Query: 109 HIFGQPIKVNW 119
+ G+P+K+ W
Sbjct: 309 MVQGRPLKIQW 319
>gi|346972032|gb|EGY15484.1| nucleolysin TIA-1 [Verticillium dahliae VdLs.17]
Length = 489
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 164/277 (59%), Gaps = 21/277 (7%)
Query: 68 FSSTGPLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS--S 124
FS G I + K +YGFV+Y D +A A+ TLNGR + I+VNWAY S +
Sbjct: 118 FSCLGTRRAADTIFQQKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNTT 177
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
+EDTS HF++FVGDLS EV D L F+ F + S+ARVMWD KTGRSRG+GFV+FR++
Sbjct: 178 SKEDTSNHFHIFVGDLSNEVNDEILSQAFAAFGSVSEARVMWDMKTGRSRGYGFVAFRDR 237
Query: 185 EDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDSKSVVELT---------NGI 234
DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ + + T +G+
Sbjct: 238 PDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGMTPTTPFGHHQFPAHGM 297
Query: 235 SDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFG 293
+ S E P + TTVYVGNL+ T D+ F G + + R Q D+GF
Sbjct: 298 A-----SYEVILAQTPNWQTTVYVGNLTPYTTPNDVVPLFQNF--GFVVESRFQADRGFA 350
Query: 294 FVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
F++ +H AA+AI N + G+P+KCSWG TP
Sbjct: 351 FIKMESHEAAAMAICQMNGYNVNGRPLKCSWGKDKTP 387
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ P T + +F + G + + + D+ + F+ +AA+AI +NG
Sbjct: 313 TVYVGNLTPYTTPNDVVPLFQNFGFVVESRF-QADR-GFAFIKMESHEAAAMAICQMNGY 370
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDA 147
++ G+P+K +W + + +G F+ SP+ A
Sbjct: 371 NVNGRPLKCSW--GKDKTPNAAGGFDPAQQGYSPQSATA 407
>gi|426253188|ref|XP_004020282.1| PREDICTED: nucleolysin TIAR isoform 3 [Ovis aries]
Length = 385
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 176/294 (59%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAM 67
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F
Sbjct: 68 NGRKILGKEVKVNWATTPSSQKKDTSSKYFCCILRKSYHFHVFVGDLSPEITTEDIKSAF 127
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 128 APFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKP 187
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ Q +++K + ++ N+ +P+N TVY G ++S +T + + F
Sbjct: 188 PAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTF 235
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 236 SPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 287
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA T +K+ + SK +
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWA---TTPSSQKKDTSSKYFCCIL--------------- 101
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 102 -RKSYHFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 158
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 159 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 193
>gi|395501989|ref|XP_003755369.1| PREDICTED: nucleolysin TIAR [Sarcophilus harrisii]
Length = 392
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 34/297 (11%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVD 91
YVGN+ VT L+ ++FS GP + CK+I + S Y FV+
Sbjct: 15 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 74
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
+++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T +
Sbjct: 75 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 134
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 135 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 194
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + Q +++K + ++ N+ +P+N TVY G ++S +T +
Sbjct: 195 RKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMR 242
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 243 QTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 297
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 112 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 171
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 172 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 231
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 232 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 285
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 286 EGHVVKCYWGKE 297
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 97/224 (43%), Gaps = 54/224 (24%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG-----------F 178
N +VG+LS +VT+ + FS C +++ +Q R S GF F
Sbjct: 13 NSYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCF 72
Query: 179 VSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQ 238
V F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 73 VEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN--------------- 115
Query: 239 EKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGF 292
+ V+VG+LS E+T+ D+ F G I D RV +D KG+
Sbjct: 116 -------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGY 160
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 161 GFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 203
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 19/102 (18%)
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHAL-----CVGTIE---DVRVQRDKGFG----- 293
ENN YVGNLS +VT V + + F + C E RV GF
Sbjct: 6 ENNVVLANSYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 65
Query: 294 ------FVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
FV + H +AA A+ N R + GK +K +W + P+
Sbjct: 66 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPS 107
>gi|126273037|ref|XP_001367935.1| PREDICTED: nucleolysin TIAR isoform 3 [Monodelphis domestica]
Length = 385
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 176/302 (58%), Gaps = 31/302 (10%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 3 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 62
Query: 101 AIVTLNGRHIFGQPIKVNWAYA-SSQREDTSG--------------HFNVFVGDLSPEVT 145
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 63 ALAAMNGRKILGKEVKVNWATTPSSQKKDTSSKYIVAITVHLRDQDHFHVFVGDLSPEIT 122
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 123 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 182
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q + +K + ++ N+ +P+N TVY G ++S +T
Sbjct: 183 TNWATRKPPAPKSTQENSTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 230
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 231 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 288
Query: 326 SK 327
+
Sbjct: 289 KE 290
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 103/216 (47%), Gaps = 27/216 (12%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 59
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA T +K+ + SK +V +T + D
Sbjct: 60 AAAALAAMNGRKILGKEVKVNWA---TTPSSQKKDTSSKYIVAITVHLRD---------- 106
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 107 ---QDHFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 161
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 162 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 196
>gi|426223382|ref|XP_004005854.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Ovis aries]
gi|440907815|gb|ELR57912.1| Nucleolysin TIA-1 isoform p40 [Bos grunniens mutus]
Length = 386
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|115497910|ref|NP_001069577.1| nucleolysin TIA-1 isoform p40 [Bos taurus]
gi|111308630|gb|AAI20428.1| TIA1 cytotoxic granule-associated RNA binding protein [Bos taurus]
gi|296482421|tpg|DAA24536.1| TPA: TIA1 cytotoxic granule-associated RNA binding protein [Bos
taurus]
Length = 384
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|344283907|ref|XP_003413712.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Loxodonta
africana]
Length = 386
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQL--------SYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|47228429|emb|CAG05249.1| unnamed protein product [Tetraodon nigroviridis]
Length = 411
Score = 205 bits (522), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 165/282 (58%), Gaps = 17/282 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ E+F GP + CK+I Y FV++++ R A I +NGR
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHATATIAAMNGR 60
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA +SQ++DTS HF+VFVGDLSPE+T + A F F SD RV+ D
Sbjct: 61 KILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKD 120
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +++++K
Sbjct: 121 MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTK-- 178
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
Q +E +++P TVY G +++ +T + + F G I ++RV
Sbjct: 179 ----------QLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPF--GHIMEIRVF 226
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
DKG+ FVR+++H AA AI N + G +KC WG + T
Sbjct: 227 PDKGYSFVRFNSHEAAAHAIVSVNGTTIEGYVVKCYWGKETT 268
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S+ V+VG++ P++T ++ F G + C+++K YGFV +F++ A
Sbjct: 81 DTSSHFHVFVGDLSPEITTDDIKAAFGPFGKISDCRVVKDMATGKSKGYGFVSFFNKWDA 140
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA + + + + V+ G
Sbjct: 141 ENAIQQMGGQWLGGRQIRTNWATRKPAPKTTNETTNTKQLSFDEVVNQSSPSNCTVYCGG 200
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 201 VTTGLTEQIMRQTFSPFGHIMEIRVFPD------KGYSFVRFNSHEAAAHAIVSVNGTTI 254
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 255 EGYVVKCYWGKE 266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 41/202 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + F C +++ D T + FV F A + I +N
Sbjct: 1 YVGNLSRDVTEALILELFGQIGPCKSCKMIVD--TAGHDPYCFVEFYEHRHATATIAAMN 58
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA T +K+ + S + V
Sbjct: 59 GRKILGKEVKVNWAT---TPTSQKKDTSS---------------------------HFHV 88
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 89 FVGDLSPEITTDDIKAAFGPF--GKISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 146
Query: 310 GNARILCGKPIKCSWGS-KPTP 330
+ L G+ I+ +W + KP P
Sbjct: 147 MGGQWLGGRQIRTNWATRKPAP 168
>gi|73969892|ref|XP_866571.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 9 [Canis lupus
familiaris]
gi|301758208|ref|XP_002914947.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Ailuropoda
melanoleuca]
gi|410954995|ref|XP_003984144.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 2 [Felis catus]
gi|431912606|gb|ELK14624.1| Nucleolysin TIA-1 isoform p40 [Pteropus alecto]
Length = 386
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 172/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|449282273|gb|EMC89133.1| Nucleolysin TIAR, partial [Columba livia]
Length = 378
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 34/297 (11%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVD 91
YVGN+ VT L+ ++FS GP + CK+I + S Y FV+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
+++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + Q +++K + ++ N+ +P+N TVY G ++S +T +
Sbjct: 181 RKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMR 228
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 QTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 272 EGHVVKCYWGKE 283
>gi|6755783|ref|NP_035715.1| nucleolysin TIA-1 isoform 1 [Mus musculus]
gi|1729966|sp|P52912.1|TIA1_MOUSE RecName: Full=Nucleolysin TIA-1; AltName: Full=RNA-binding protein
TIA-1; AltName: Full=T-cell-restricted intracellular
antigen-1; Short=TIA-1
gi|437057|gb|AAA03711.1| TIA [Mus musculus]
gi|1616673|gb|AAC52871.1| RNA binding protein TIA-1 [Mus musculus]
gi|26353510|dbj|BAC40385.1| unnamed protein product [Mus musculus]
gi|74188216|dbj|BAE25782.1| unnamed protein product [Mus musculus]
gi|148666751|gb|EDK99167.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_a
[Mus musculus]
Length = 386
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K Q +E +++P TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTK------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+S+H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|213514260|ref|NP_001133879.1| Nucleolysin TIAR [Salmo salar]
gi|209155676|gb|ACI34070.1| Nucleolysin TIAR [Salmo salar]
Length = 408
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 121/315 (38%), Positives = 177/315 (56%), Gaps = 35/315 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D S +++YVGN+ VT L+ ++F+ GP + CK+I + S
Sbjct: 3 DESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQSS 62
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++F+ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 63 NDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 122
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + A F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 123 EITTEDIKAAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 182
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q + SK Q + + +++PQ TVY G + S
Sbjct: 183 QIRTNWATRKPPAPKNVQDNGSK------------QLRFEDVVNQSSPQNCTVYCGGIQS 230
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
++ + + F G I ++RV +KG+ F+R+S+H AA AI N + +KC
Sbjct: 231 GLSEHLMRQTFSPF--GQIMEIRVFPEKGYSFIRFSSHESAAHAIVSVNGTSIECHIVKC 288
Query: 323 SWGSKPTPPGTSSTP 337
WG K +P S P
Sbjct: 289 YWG-KESPDIAKSVP 302
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 53/225 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED S ++VG+LS +VT+ + F+ C +++ +Q R S GF
Sbjct: 2 EDESHPKTLYVGNLSRDVTEILILQLFTQIGPCKSCKMITEQPDSRRMNSSVGFSVLQQS 61
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 SNDPYCFVEFFEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKAAFAPF--GKISDARVVKDMT 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
KG+GFV + +A AI + L G+ I+ +W ++ P
Sbjct: 150 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPP 194
>gi|417410268|gb|JAA51610.1| Putative apoptosis-promoting rna-binding protein tia-1/tiar rrm
superfamily, partial [Desmodus rotundus]
Length = 382
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 34/297 (11%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVD 91
YVGN+ VT L+ ++FS GP + CK+I + S Y FV+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
+++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + Q +++K + ++ N+ +P+N TVY G ++S +T +
Sbjct: 181 RKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMR 228
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 QTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 272 EGHVVKCYWGKE 283
>gi|355562824|gb|EHH19418.1| hypothetical protein EGK_20118, partial [Macaca mulatta]
gi|355766617|gb|EHH62534.1| hypothetical protein EGM_20905, partial [Macaca fascicularis]
gi|440900070|gb|ELR51281.1| Nucleolysin TIAR, partial [Bos grunniens mutus]
Length = 381
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 34/297 (11%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVD 91
YVGN+ VT L+ ++FS GP + CK+I + S Y FV+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
+++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + Q +++K + ++ N+ +P+N TVY G ++S +T +
Sbjct: 181 RKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMR 228
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 QTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 272 EGHVVKCYWGKE 283
>gi|281338083|gb|EFB13667.1| hypothetical protein PANDA_003438 [Ailuropoda melanoleuca]
Length = 340
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/297 (39%), Positives = 172/297 (57%), Gaps = 34/297 (11%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YGFVD 91
YVGN+ VT L+ ++FS GP + CK+I + S Y FV+
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYCFVE 60
Query: 92 YFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLF 150
+++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T +
Sbjct: 61 FYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIK 120
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 121 SAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWAT 180
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
+ + Q +++K + ++ N+ +P+N TVY G ++S +T +
Sbjct: 181 RKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMR 228
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 229 QTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 283
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 158 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 217
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 218 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 271
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 272 EGHVVKCYWGKE 283
>gi|116191711|ref|XP_001221668.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
gi|88181486|gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium globosum CBS 148.51]
Length = 413
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/266 (43%), Positives = 155/266 (58%), Gaps = 10/266 (3%)
Query: 73 PLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTS 130
P G L +YGFV+Y D +A A+ TLNGR + I+VNWAY S + +EDTS
Sbjct: 57 PDRGSLLRWAKGYNYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNSTNKEDTS 116
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
HF++FVGDLS EV D L FS F + S+ARVMWD KTGRSRG+GFV+FR + DA+ A
Sbjct: 117 NHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDAEKA 176
Query: 191 INDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDSKSVVELT-----NGISDGQEKSNED 244
++ ++G+WLG+R IRCNWA KG S ++Q+ + T + + G +
Sbjct: 177 LSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSYDMI 236
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
+ TT YVGNL+ T D+ F G + + R Q D+GF FV+ TH AA
Sbjct: 237 VNQTPAWQTTCYVGNLTPYTTQQDIVPLFQNF--GFVVESRFQADRGFSFVKMDTHENAA 294
Query: 305 LAIQMGNARILCGKPIKCSWGSKPTP 330
+AI N + G+P+KCSWG TP
Sbjct: 295 MAICQLNGYNVNGRPLKCSWGKDKTP 320
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 84/208 (40%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 114 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERPDA 173
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q GH +
Sbjct: 174 EKALSSMDGEWLGSRAIRCNWANQKGQPSMAQQQAMQQMGMTPTTPYGHHHFPTHGVHSY 233
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T + F F ++R D RGF FV
Sbjct: 234 DMIVNQTPAWQTTCYVGNLTPYTTQQDIVPLFQNFGFVVESRFQAD------RGFSFVKM 287
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI LNG + R ++C+W
Sbjct: 288 DTHENAAMAICQLNGYNVNGRPLKCSWG 315
>gi|387017378|gb|AFJ50807.1| Nucleolysin TIA-1 isoform p40 [Crotalus adamanteus]
Length = 392
Score = 204 bits (519), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/297 (40%), Positives = 174/297 (58%), Gaps = 29/297 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVNTLRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + + N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNAKQLSY--------DDVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG K TP
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWG-KETP 288
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVVNTLR----------------SQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|387017380|gb|AFJ50808.1| Nucleolysin TIAR [Crotalus adamanteus]
Length = 388
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 120/306 (39%), Positives = 175/306 (57%), Gaps = 35/306 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-------------------YG 88
+++YVGN+ VT L+ ++FS GP + CK+I + S Y
Sbjct: 8 KTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTSNDPYC 67
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDA 147
FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
WA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 188 WATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQ 235
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + F G I + R KG+ FVR+STH AA AI N + G +KC WG K
Sbjct: 236 LMRQTFSPF--GQIVETRAFPVKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG-K 292
Query: 328 PTPPGT 333
TP T
Sbjct: 293 ETPDTT 298
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 84/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMTTGKSKGYGFVSFYNKLDA 167
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 227
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + R +G+ FV F E A AI +NG +
Sbjct: 228 IASGLTDQLMRQTFSPFGQIVETRAF------PVKGYSFVRFSTHESAAHAIVSVNGTTI 281
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 282 EGHVVKCYWGKE 293
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 2 EDDGQPKTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 61
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMT 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 199
>gi|297687495|ref|XP_002821248.1| PREDICTED: nucleolysin TIAR isoform 3 [Pongo abelii]
Length = 386
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 172/289 (59%), Gaps = 18/289 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +NGR I G+ +KVNWA S ++ HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGK 123
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
Q +++K + ++ N+ +P+N TVY G ++S +T + + F
Sbjct: 184 TQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF-- 229
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 278
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S K ++ +
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVN--------------- 96
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 97 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 149
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 184
>gi|410298560|gb|JAA27880.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 388
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/296 (39%), Positives = 173/296 (58%), Gaps = 30/296 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++YVGN+ VT AL+ ++FS GP + CK+I +++ Y FV++ + R AA A+
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALA 66
Query: 104 TLNGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFA 151
+NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A
Sbjct: 67 AMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKA 126
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 AFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 186
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
+ S++K + E N+ +P N TVY G ++S +T + +
Sbjct: 187 KPPAPKSTYESNTKQL--------SYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQ 234
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 TFSPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 288
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 28/208 (13%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D +T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAAM 68
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 69 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 109
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 110 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 167
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 168 QMGGQWLGGRQIRTNWATR-KPPAPKST 194
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHAL--C--VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F + C I DVR + + FV + H AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYCFVEFHEHRHAAAALAA 67
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 68 MNGRKIMGKEVKVNWATTPS 87
>gi|149036617|gb|EDL91235.1| rCG56007, isoform CRA_a [Rattus norvegicus]
Length = 386
Score = 204 bits (518), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K Q +E +++P TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTK------------QLSYDEVVSQSSPGNCTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ F+R+S+H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFIRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|348566571|ref|XP_003469075.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Cavia porcellus]
Length = 388
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K Q +E +++P TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTK------------QLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|351714346|gb|EHB17265.1| Nucleolysin TIA-1 isoform p40 [Heterocephalus glaber]
Length = 386
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/294 (39%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K Q +E +++P TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTK------------QLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|26390405|dbj|BAC25892.1| unnamed protein product [Mus musculus]
Length = 358
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 163/272 (59%), Gaps = 17/272 (6%)
Query: 59 VTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIK 116
VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +NGR I G+ +K
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVK 60
Query: 117 VNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
VNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV+ D TG+S+G
Sbjct: 61 VNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKG 120
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++K
Sbjct: 121 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTK---------- 170
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
Q +E +++P TVY G ++S +T + + F G I ++RV DKG+ FV
Sbjct: 171 --QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEIRVFPDKGYSFV 226
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
R+S+H AA AI N + G +KC WG +
Sbjct: 227 RFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 258
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 73 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 132
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 133 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 192
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +T+ + FS F + RV D +G+ FV F + E A AI +NG +
Sbjct: 193 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTI 246
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 247 EGHVVKCYWGKE 258
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 89/199 (44%), Gaps = 41/199 (20%)
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
VT+A + FS C + +++ D T + + FV F A +A+ +NG+ + ++
Sbjct: 1 VTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKE 58
Query: 204 IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSE 263
++ NWA S +K +S+ + V+VG+LS E
Sbjct: 59 VKVNWAT--TPSSQKKDTSN----------------------------HFHVFVGDLSPE 88
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQMGNARILCG 317
+T+ D+ F G I D RV +D KG+GFV + +A AIQ + L G
Sbjct: 89 ITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGG 146
Query: 318 KPIKCSWGSKPTPPGTSST 336
+ I+ +W ++ PP ST
Sbjct: 147 RQIRTNWATR-KPPAPKST 164
>gi|297687491|ref|XP_002821246.1| PREDICTED: nucleolysin TIAR isoform 1 [Pongo abelii]
gi|410976205|ref|XP_003994513.1| PREDICTED: nucleolysin TIAR isoform 1 [Felis catus]
Length = 376
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 172/289 (59%), Gaps = 18/289 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +NGR I G+ +KVNWA S ++ HF+VFVGDLSPE+T + + F+ F
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLSPEITTEDIKSAFAPFGK 123
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 124 ISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKS 183
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
Q +++K + ++ N+ +P+N TVY G ++S +T + + F
Sbjct: 184 TQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF-- 229
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 230 GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 278
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S K ++ +
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVN--------------- 96
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 97 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 149
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 184
>gi|387762942|ref|NP_001248687.1| TIA1 cytotoxic granule-associated RNA binding protein [Macaca
mulatta]
gi|84579193|dbj|BAE73030.1| hypothetical protein [Macaca fascicularis]
gi|355565763|gb|EHH22192.1| hypothetical protein EGK_05415 [Macaca mulatta]
gi|355751389|gb|EHH55644.1| hypothetical protein EGM_04890 [Macaca fascicularis]
gi|380816026|gb|AFE79887.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|383421173|gb|AFH33800.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
gi|384949108|gb|AFI38159.1| nucleolysin TIA-1 isoform p40 isoform 2 [Macaca mulatta]
Length = 386
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|390474361|ref|XP_003734771.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Callithrix jacchus]
gi|403260486|ref|XP_003922702.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 386
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|84579137|dbj|BAE73002.1| hypothetical protein [Macaca fascicularis]
Length = 385
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|188219591|ref|NP_071505.2| nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]
gi|114577930|ref|XP_001141557.1| PREDICTED: uncharacterized protein LOC459303 isoform 2 [Pan
troglodytes]
gi|397521824|ref|XP_003830986.1| PREDICTED: nucleolysin TIA-1 isoform p40 isoform 1 [Pan paniscus]
gi|206729905|sp|P31483.3|TIA1_HUMAN RecName: Full=Nucleolysin TIA-1 isoform p40; AltName:
Full=RNA-binding protein TIA-1; AltName:
Full=T-cell-restricted intracellular antigen-1;
Short=TIA-1; AltName: Full=p40-TIA-1
gi|62702267|gb|AAX93193.1| unknown [Homo sapiens]
gi|119620230|gb|EAW99824.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_b [Homo sapiens]
gi|261861076|dbj|BAI47060.1| TIA1 cytotoxic granule-associated RNA binding protein [synthetic
construct]
gi|410226260|gb|JAA10349.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410254978|gb|JAA15456.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410298556|gb|JAA27878.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
gi|410353839|gb|JAA43523.1| TIA1 cytotoxic granule-associated RNA binding protein [Pan
troglodytes]
Length = 386
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|281346697|gb|EFB22281.1| hypothetical protein PANDA_002889 [Ailuropoda melanoleuca]
Length = 377
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 169/291 (58%), Gaps = 28/291 (9%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 60
Query: 109 HIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVF 156
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 181 KSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF 228
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 229 --GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 30/207 (14%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 58
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA T +K+ + S +VV + + + + V
Sbjct: 59 GRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFHV 99
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 100 FVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 158 MGGQWLGGRQIRTNWATR-KPPAPKST 183
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTL 105
V+VG++ P++T ++ F+ G + +++K YGFV +F++ A AI +
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 106 NGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGDLSPEVTD 146
G+ + G+ I+ NWA Y S+ + + + + V+ G ++ +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 218
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
+ FS F + RV D +G+ FV F + E A AI +NG + ++C
Sbjct: 219 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 272
Query: 207 NWAAK 211
W +
Sbjct: 273 YWGKE 277
>gi|196009388|ref|XP_002114559.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
gi|190582621|gb|EDV22693.1| hypothetical protein TRIADDRAFT_28438 [Trichoplax adhaerens]
Length = 292
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 166/283 (58%), Gaps = 14/283 (4%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
Y+GN+ Q T + E+F+ G ++ CKLI + + YGFV+Y ++ SAA A+ +NG
Sbjct: 8 YIGNLDRQTTEQSIGELFAKFGAIKRCKLITEHGGNDPYGFVEYAEKNSAARALDAMNGY 67
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQ 168
+ IKVNWA SS R+DT+ H+++FVGDLSP++ L + F+ F SDARV+ D
Sbjct: 68 SFGSRAIKVNWATNSSMRKDTN-HYHIFVGDLSPDIDTTLLRSAFNQFGHVSDARVVKDS 126
Query: 169 KTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV 228
TG+ RG+GFVS++ + +A++A+ +NG WLG R IR NWA + + +Q+SDS S
Sbjct: 127 ATGKPRGYGFVSYQFKHEAENAMQSMNGAWLGGRNIRTNWATRKPGATTNRQNSDSSSTK 186
Query: 229 ELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQR 288
L + E + A N TVYVGNLS+ T L R F + G I D+RV
Sbjct: 187 SL-----NYDEIYLQTAVYN----CTVYVGNLSAGTTEETLRRIF--IPFGPIADIRVFP 235
Query: 289 DKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
DK + F+RY +H A AI + + + G +KCSWG + P
Sbjct: 236 DKNYAFIRYMSHDHATNAIVVIHGTAVEGSQVKCSWGKEANDP 278
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ T L+ +F GP+ ++ DK +Y F+ Y A AIV ++G
Sbjct: 203 TVYVGNLSAGTTEETLRRIFIPFGPIADIRVF-PDK-NYAFIRYMSHDHATNAIVVIHGT 260
Query: 109 HIFGQPIKVNW 119
+ G +K +W
Sbjct: 261 AVEGSQVKCSW 271
>gi|344250807|gb|EGW06911.1| Nucleolysin TIA-1 [Cricetulus griseus]
Length = 387
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--- 183
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
++ KS EL Q +E +++P TVY G ++S +T + + F
Sbjct: 184 -----RKPPAPKSTYELNT----KQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ F+R+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQILEIRVFPDKGYSFIRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|395731713|ref|XP_002811971.2| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40
[Pongo abelii]
Length = 386
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/294 (40%), Positives = 171/294 (58%), Gaps = 28/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + + Y FV++ D R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMETAGNDPYCFVEFHDDRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKKMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 186
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 187 PAPKSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 234
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 235 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 286
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ +T + + FV F + A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMI--METAGNDPYCFVEFHDDRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKKMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
>gi|410900506|ref|XP_003963737.1| PREDICTED: nucleolysin TIAR-like isoform 2 [Takifugu rubripes]
Length = 408
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 174/312 (55%), Gaps = 41/312 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI----KKDK-------------- 84
+ S +++YVGN+ VT L+ ++FS GP + CK+I +D+
Sbjct: 3 EESLSKTLYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWL 62
Query: 85 --------SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNV 135
Y FV++ D + AA A T+N R I G+ +KVNWA + S Q++DTS HF+V
Sbjct: 63 CCLQHTSSDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWATSPSCQKKDTSNHFHV 122
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVGDLSP++T + A F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI+ +
Sbjct: 123 FVGDLSPDITTEDIRAAFAPFGHISDARVLKDMATGKSKGYGFVSFYNKLDAENAISKMA 182
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+WL RQIR NWA + + Q + SK + K ++ +++P TV
Sbjct: 183 GQWLQGRQIRTNWATRKPPAPKSFQDNGSKHL------------KFDDIVTQSSPHNCTV 230
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
Y G + S +T + + F G I ++RV DKG+ FVR+S+H AA AI N ++
Sbjct: 231 YCGGIQSGLTEHLMQQTFSPF--GQIMEIRVFPDKGYSFVRFSSHDSAAHAIVSVNGTVI 288
Query: 316 CGKPIKCSWGSK 327
G +KC WG +
Sbjct: 289 EGNLVKCFWGKE 300
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 60/224 (26%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVM-----------WDQKTG-----------R 172
++VG+LS +VT+ + FS C +++ W Q
Sbjct: 10 LYVGNLSRDVTEILILQLFSQIGPCKSCKMITDVNNRDRLLEWLQLNNFYVWLCCLQHTS 69
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
S + FV F + +DA SA +N + + ++++ NWA + S +K +S+
Sbjct: 70 SDPYCFVEFVDHKDAASARATMNKRKILGKEVKVNWAT--SPSCQKKDTSN--------- 118
Query: 233 GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD--- 289
+ V+VG+LS ++T+ D+ F G I D RV +D
Sbjct: 119 -------------------HFHVFVGDLSPDITTEDIRAAFAPF--GHISDARVLKDMAT 157
Query: 290 ---KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
KG+GFV + +A AI + L G+ I+ +W ++ P
Sbjct: 158 GKSKGYGFVSFYNKLDAENAISKMAGQWLQGRQIRTNWATRKPP 201
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T L+Q+ FS G + ++ DK Y FV + SAA AIV++NG
Sbjct: 229 TVYCGGIQSGLTEHLMQQTFSPFGQIMEIRVFP-DKG-YSFVRFSSHDSAAHAIVSVNGT 286
Query: 109 HIFGQPIKVNWAYASSQREDTS 130
I G +K W S + S
Sbjct: 287 VIEGNLVKCFWGKESPDMQKNS 308
>gi|395507384|ref|XP_003758005.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Sarcophilus harrisii]
Length = 394
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 117/292 (40%), Positives = 170/292 (58%), Gaps = 28/292 (9%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNG 107
+YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +NG
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNG 67
Query: 108 RHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSV 155
R I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+
Sbjct: 68 RKIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAP 127
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 128 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 187
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
S++K + + N+ +P N TVY G ++S +T + + F
Sbjct: 188 PKSTYESNTKQLSY--------DDVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 235
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 236 F--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 285
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 8 MYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 65
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + +
Sbjct: 66 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVVSTLR----------------SQDHFH 106
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 107 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 164
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 165 QMGGQWLGGRQIRTNWATR-KPPAPKST 191
>gi|395742091|ref|XP_003777693.1| PREDICTED: nucleolysin TIAR [Pongo abelii]
Length = 386
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 28/299 (9%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT------------SGHFNVFVGDLSPEVTDAT 148
A+ +NGR I G+ +KVNWA S ++ S HF+VFVGDLSPE+T
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTED 123
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NW
Sbjct: 124 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
A + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 184 ATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQL 231
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 232 MRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 288
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S K ++ ++ + +
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVSTPVPNALISD----- 106
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 107 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 160 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 194
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
E++ Q T+YVGNLS +VT V + + F + C + + FV + H +AA
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 305 LAIQMGNARILCGKPIKCSWGSKPTPPGT---SSTPLP 339
A+ N R + GK +K +W + P+ STP+P
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVP 100
>gi|297687497|ref|XP_002821249.1| PREDICTED: nucleolysin TIAR isoform 4 [Pongo abelii]
Length = 396
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 173/299 (57%), Gaps = 28/299 (9%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D R++YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAA 63
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT------------SGHFNVFVGDLSPEVTDAT 148
A+ +NGR I G+ +KVNWA S ++ S HF+VFVGDLSPE+T
Sbjct: 64 ALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVPNALISDHFHVFVGDLSPEITTED 123
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NW
Sbjct: 124 IKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNW 183
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
A + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 184 ATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLTDQL 231
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 232 MRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 288
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
ED ++VG+LS +VT+ + FS C +++ + + + FV F D
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRD 60
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP 246
A +A+ +NG+ + ++++ NWA S K ++ ++ + +
Sbjct: 61 AAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVSTPVPNALISD----- 106
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV +
Sbjct: 107 -----HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNK 159
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+A AI + L G+ I+ +W ++ PP ST
Sbjct: 160 LDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 194
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHAL--CVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
E++ Q T+YVGNLS +VT V + + F + C + + FV + H +AA
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAA 62
Query: 305 LAIQMGNARILCGKPIKCSWGSKPTPPGT---SSTPLP 339
A+ N R + GK +K +W + P+ STP+P
Sbjct: 63 AALAAMNGRKILGKEVKVNWATTPSSQKKILPVSTPVP 100
>gi|126304035|ref|XP_001381740.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Monodelphis domestica]
Length = 409
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/291 (40%), Positives = 169/291 (58%), Gaps = 28/291 (9%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA A+ +NGR
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAAMNGR 83
Query: 109 HIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVF 156
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 84 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTLRSQDHFHVFVGDLSPEITTEDIKAAFAPF 143
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 144 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 203
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S++K + + N+ +P N TVY G ++S +T + + F
Sbjct: 204 KSTYESNTKQLSY--------DDVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF 251
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 252 --GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 300
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 30/207 (14%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +N
Sbjct: 24 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAMN 81
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA T +K+ + S +VV + + V
Sbjct: 82 GRKIMGKEVKVNWAT---TPSSQKKDTSSSTVVSTLR----------------SQDHFHV 122
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 123 FVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 180
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 181 MGGQWLGGRQIRTNWATR-KPPAPKST 206
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 89/196 (45%), Gaps = 34/196 (17%)
Query: 44 ASTCRS-----VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFD 94
ST RS V+VG++ P++T ++ F+ G + +++K YGFV +F+
Sbjct: 111 VSTLRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFN 170
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNV 135
+ A AI + G+ + G+ I+ NWA Y S+ + + + + V
Sbjct: 171 KWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDDVVNQSSPSNCTV 230
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G ++ +T+ + FS F + RV D +G+ FV F + E A AI +N
Sbjct: 231 YCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVN 284
Query: 196 GKWLGNRQIRCNWAAK 211
G + ++C W +
Sbjct: 285 GTTIEGHVVKCYWGKE 300
>gi|326924063|ref|XP_003208252.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIAR-like [Meleagris
gallopavo]
Length = 382
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 169/280 (60%), Gaps = 17/280 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +NGR
Sbjct: 22 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 81
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D
Sbjct: 82 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 141
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR + Q +++K +
Sbjct: 142 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQL 201
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
++ N+ +P+N TVY G ++S +T + + F G I ++RV
Sbjct: 202 --------RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVF 247
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+KG+ FVR+STH AA AI N + G +KC WG +
Sbjct: 248 PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 287
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 102 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 161
Query: 99 ALAIVTLNGRHIFGQPIKVNW------AYASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ A S+Q +T + V+ G
Sbjct: 162 ENAIVHMGGQWLGGRQIRXXXXXXXXPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 221
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 222 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 275
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 276 EGHVVKCYWGKE 287
>gi|27924240|gb|AAH45086.1| Tia1 protein, partial [Xenopus laevis]
Length = 427
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/313 (37%), Positives = 178/313 (56%), Gaps = 35/313 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-------------------D 83
D R++YVGN+ VT L+ ++FS GP + CK+I + +
Sbjct: 41 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNAN 100
Query: 84 KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSP 142
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSP
Sbjct: 101 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSP 160
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 161 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 220
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ + +N TVY G + +
Sbjct: 221 QIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSSKN----CTVYCGGIGA 268
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
++ + + F G I ++RV +KG+ F+R+STH AA AI N + G +KC
Sbjct: 269 GLSEQLMRQTFGVF--GQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKC 326
Query: 323 SWGSKPTPPGTSS 335
WG K TP T +
Sbjct: 327 YWG-KETPDMTKN 338
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG----------- 175
ED ++VG+LS +VT+ + FS C +++ +Q GR G
Sbjct: 40 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQTDGRRVGASVSFPVMPNA 99
Query: 176 ----FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
+ FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 100 NNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 149
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 150 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 187
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 188 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 237
>gi|402891170|ref|XP_003908827.1| PREDICTED: nucleolysin TIA-1 isoform p40, partial [Papio anubis]
Length = 377
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/291 (40%), Positives = 168/291 (57%), Gaps = 28/291 (9%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +NGR
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 60
Query: 109 HIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSVF 156
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F
Sbjct: 61 KIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPF 120
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 121 GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAP 180
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 181 KSTYESNTKQLSY--------DEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSPF 228
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 229 --GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 277
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 30/207 (14%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +N
Sbjct: 1 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 58
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA T +K+ + S +VV + + + + V
Sbjct: 59 GRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFHV 99
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 100 FVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 157
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 158 MGGQWLGGRQIRTNWATR-KPPAPKST 183
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 29/185 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTL 105
V+VG++ P++T ++ F+ G + +++K YGFV +F++ A AI +
Sbjct: 99 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQM 158
Query: 106 NGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGDLSPEVTD 146
G+ + G+ I+ NWA Y S+ + + + + V+ G ++ +T+
Sbjct: 159 GGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTE 218
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
+ FS F + RV D +G+ FV F + E A AI +NG + ++C
Sbjct: 219 QLMRQTFSPFGQIMEIRVFPD------KGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKC 272
Query: 207 NWAAK 211
W +
Sbjct: 273 YWGKE 277
>gi|326473644|gb|EGD97653.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton tonsurans CBS 112818]
Length = 470
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 39/293 (13%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R++YVG + P+VT +L+++F +TG ++ K+I DK+
Sbjct: 102 RALYVGGLDPRVTEDILKQIFETTGHVQSVKIIP-DKNE--------------------- 139
Query: 108 RHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
I+VNWAY S + +EDTS HF++FVGDLS EV D L FS + S+ARVM
Sbjct: 140 -------IRVNWAYQSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVM 192
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDS 224
WD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ +
Sbjct: 193 WDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 252
Query: 225 KSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ T + +S + + PQ+ TT YVGNL+ T DL F G
Sbjct: 253 MGMTPTTPFGHHHFPTHGVQSYDMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNF--G 310
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
+ + R Q D+GF FV+ TH AA+AI N + G+P+KCSWG P G
Sbjct: 311 YVVETRFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 363
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 87/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 155 DTSSHFHIFVGDLSNEVNDEVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAFRERADA 214
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 215 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 274
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 275 DMVVQQTPQWQTTCYVGNLTPYTTQNDLIPLFQNFGYVVETRFQAD------RGFAFVKM 328
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI LNG + R ++C+W +G
Sbjct: 329 DTHENAAMAICQLNGYNVNGRPLKCSWGKDRPPTG 363
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFG 293
+SN + E+ + ++VG+LS+EV L + F A G++ + RV R +G+G
Sbjct: 147 QSNTASKEDTSSHFHIFVGDLSNEVNDEVLLQAFSA--CGSVSEARVMWDMKTGRSRGYG 204
Query: 294 FVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
FV + +A A+ + L + I+C+W ++ P S
Sbjct: 205 FVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 245
>gi|295669832|ref|XP_002795464.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285398|gb|EEH40964.1| TIA1 cytotoxic granule-associated RNA binding protein
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 501
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 116/293 (39%), Positives = 165/293 (56%), Gaps = 39/293 (13%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R++YVG + P+VT +L+++F +TG ++ K+I DK+
Sbjct: 100 RALYVGGLDPRVTEDILRQIFETTGHVQSVKIIP-DKNE--------------------- 137
Query: 108 RHIFGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
I+VNWAY S+ +EDTS HF++FVGDLS EV D L FS F + S+ARVM
Sbjct: 138 -------IRVNWAYQSNSNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVM 190
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDS 224
WD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ +
Sbjct: 191 WDMKTGRSRGYGFVAFRERSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAA 250
Query: 225 KSVVELT----NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ T + +S + PQ+ TT YVGNL+ T DL F G
Sbjct: 251 MGMTPTTPFGHHHFPTHGVQSYDMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNF--G 308
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
+ + R Q D+GF FV+ TH AA+AI + + G+P+KCSWG P G
Sbjct: 309 YVVETRFQADRGFAFVKMDTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 361
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 86/215 (40%), Gaps = 47/215 (21%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 153 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERSDA 212
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS---------------GHFNV-------- 135
A+ +++G + + I+ NWA Q + GH +
Sbjct: 213 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSY 272
Query: 136 --------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+VG+L+P T L F F + R D RGF FV
Sbjct: 273 DMVVAQTPQWQTTCYVGNLTPYTTQNDLVPLFQNFGYVVETRFQAD------RGFAFVKM 326
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
E+A AI L+G + R ++C+W +G
Sbjct: 327 DTHENAAMAICQLSGYNVNGRPLKCSWGKDRPPTG 361
>gi|449534217|ref|XP_004174062.1| PREDICTED: nucleolysin TIAR-like, partial [Cucumis sativus]
Length = 110
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 88/101 (87%), Positives = 101/101 (100%)
Query: 85 SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEV 144
SSYGFVDYFDRRSAA++I++LNGR++FGQPIKVNWAYASSQREDTSGHFN+FVGDLSPEV
Sbjct: 1 SSYGFVDYFDRRSAAVSIISLNGRNLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEV 60
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
TDATLFACFSV+P+CSDARVMWDQKTGRSRG+GFV+FRN++
Sbjct: 61 TDATLFACFSVYPSCSDARVMWDQKTGRSRGYGFVAFRNEQ 101
>gi|167391953|ref|XP_001739964.1| nucleolysin TIAR [Entamoeba dispar SAW760]
gi|165896141|gb|EDR23641.1| nucleolysin TIAR, putative [Entamoeba dispar SAW760]
Length = 306
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 176/322 (54%), Gaps = 32/322 (9%)
Query: 13 QQQSLYQYHPSL-----LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEV 67
Q S YQY P + PQ P + P +A++ +SV+V IH V LL +
Sbjct: 4 QYDSRYQYPPRVPQLYQQRPPQQNPTETTEPPIPINANS-KSVHVSGIHESVDEILLGRI 62
Query: 68 FSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS 123
FS G + CK+++ DKS YGFV++ D +A A ++GR ++G+ +KVNW+Y +
Sbjct: 63 FSIVGHVVSCKIMR-DKSGTHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKVNWSYTA 121
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
Q + G + +FVG L PEV D L+ F F +DARV+ +TG+S+G+GFV+F
Sbjct: 122 QQ--ENQGSYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYGFVTFIR 179
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+EDA++A+ +NG+ L R I+ NW S E+ +S E+ N
Sbjct: 180 KEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQ---PKRSYDEINN----------- 225
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
E + Q TVY+GN+ V S DL + G+IE+VR+ +DKG+ F+++S H A
Sbjct: 226 ---ETSIQNCTVYIGNIPKNVESDDLKQLLAEY--GSIEEVRLNKDKGYAFIKFSKHESA 280
Query: 304 ALAIQMGNARILCGKPIKCSWG 325
AI M N +I+ G ++CSWG
Sbjct: 281 TSAILMCNGKIINGSTLRCSWG 302
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY+GNI V + L+++ + G +E +L KDK Y F+ + SA AI+ NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 109 HIFGQPIKVNWAYAS 123
I G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|384247365|gb|EIE20852.1| hypothetical protein COCSUDRAFT_4708, partial [Coccomyxa
subellipsoidea C-169]
Length = 264
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/282 (37%), Positives = 159/282 (56%), Gaps = 27/282 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIV 103
+++YVGN+HP V A+LQ++FS+ G + +++K + + FV + D ++AA+A+
Sbjct: 5 KALYVGNLHPYVNEAVLQDIFSTLGTVSEVRIVKDRATGNSAGSAFVKFEDHQAAAIALK 64
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
T+NGR ++ + +++ WA+ + E+T+ H ++FVG+LS +V D L F CSDAR
Sbjct: 65 TINGRILYNKEVRIQWAFQKEKTENTASHSHIFVGNLSGDVADPVLLQAFQHLGECSDAR 124
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VMWD TGRS+GFGFVSFR +E A+ A+ +++G +G +IRC WA
Sbjct: 125 VMWDHSTGRSKGFGFVSFRTKEAAEKALAEMDGAQVGQWKIRCGWA-----------HHK 173
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
+++V L D +P T VYVGNL +EV DL F A G I
Sbjct: 174 TEAVTGLDIDTVD----------RADPANTNVYVGNLPTEVMEEDLRAAFGAY--GEITG 221
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
++ G+GFV Y H A AI N + L GK +KCSWG
Sbjct: 222 LKPCHKGGYGFVTYRDHSAAVQAIVGMNGKELKGKMVKCSWG 263
>gi|16215602|emb|CAC95017.1| TIAR protein [Xenopus laevis]
Length = 389
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/308 (37%), Positives = 174/308 (56%), Gaps = 35/308 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-------------------DKSSYG 88
R++YVGN+ VT L+ ++FS GP + CK I + + Y
Sbjct: 8 RTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNANNDPYC 67
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDA 147
FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 68 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE 127
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
+ + F+ F SDARV+ D T +S+G+GFVSF N+ DA++AI + G+WLG RQIR N
Sbjct: 128 DIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTN 187
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
WA + + Q +++K Q + ++ ++ + TVY G + S +T
Sbjct: 188 WATRKPPAPKSTQENNTK------------QLRFDDVVNQSTAKNCTVYCGGIGSGLTEQ 235
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + F G I ++RV +KG+ F+R+STH AA AI N + G +KC WG K
Sbjct: 236 LMRQTFGVF--GQILEIRVFPEKGYSFIRFSTHDSAAHAIVSVNGTTIEGHVVKCYWG-K 292
Query: 328 PTPPGTSS 335
TP T +
Sbjct: 293 ETPDMTKN 300
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K +S YGFV ++++ A
Sbjct: 108 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATSKSKGYGFVSFYNKLDA 167
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AIV + G+ + G+ I+ NWA + + T+ + V+ G
Sbjct: 168 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFDDVVNQSTAKNCTVYCGG 227
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+ +T+ + F VF + RV +G+ F+ F + A AI +NG +
Sbjct: 228 IGSGLTEQLMRQTFGVFGQILEIRVF------PEKGYSFIRFSTHDSAAHAIVSVNGTTI 281
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 282 EGHVVKCYWGKE 293
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 54/231 (23%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG----------- 175
ED ++VG+LS +VT+ + FS C + + +Q GR G
Sbjct: 2 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKSITEQTDGRRVGASVSFPVLPNA 61
Query: 176 ----FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
+ FV F DA +A+ +NG+ + ++++ NWA S +K +S+
Sbjct: 62 NNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWAT--TPSSQKKDTSN-------- 111
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 112 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 149
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 150 TSKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 199
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 172/302 (56%), Gaps = 15/302 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALAIVTLN 106
R++YVGN+ VT LL VF G ++GCK+I + Y FV++ D +SAA A++ +N
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGNDPYCFVEFSDHQSAASALLAMN 72
Query: 107 GRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R FG+ +KVNWA + ++ + DTS H ++FVGDLSPE+ L F+ F SD RV
Sbjct: 73 KRLCFGKEMKVNWATSPGNTPKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRV 132
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD- 223
+ D +T +S+G+GFVSF + DA++AI +NG+WLG+R IR NWA + + + D
Sbjct: 133 VRDPQTLKSKGYGFVSFVKKADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDI 192
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
+ S LT E N+ +P N TVY G ++ ++ + + F + G I++
Sbjct: 193 TTSTKPLTF-----DEVYNQSSPTN----CTVYCGGITQGLSEELMQKTFSSY--GAIQE 241
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPA 343
+RV +DKG+ F+R+ T A AI + + G+ +KCSWG + T P P P
Sbjct: 242 IRVFKDKGYAFIRFGTKEAATHAIVATHNSDVNGQTVKCSWGKEATDPNNQQQPQVSPGD 301
Query: 344 PH 345
H
Sbjct: 302 KH 303
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 92/208 (44%), Gaps = 33/208 (15%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L++ F+ G + C++++ ++ YGFV + +
Sbjct: 93 PKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKK 152
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------YASSQREDTSGH 132
A AI T+NG+ + + I+ NWA + + + +
Sbjct: 153 ADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTN 212
Query: 133 FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
V+ G ++ +++ + FS + + RV D +G+ F+ F +E A AI
Sbjct: 213 CTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKD------KGYAFIRFGTKEAATHAIV 266
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ + + ++C+W + +++Q
Sbjct: 267 ATHNSDVNGQTVKCSWGKEATDPNNQQQ 294
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTHPEAA 304
N+ Q T+YVGNL + VT L F + G ++ ++ + G + FV +S H AA
Sbjct: 8 NDCQPRTLYVGNLDTAVTEELLVAVFGQM--GQVKGCKIIHEPGNDPYCFVEFSDHQSAA 65
Query: 305 LAIQMGNARILCGKPIKCSWGSKP 328
A+ N R+ GK +K +W + P
Sbjct: 66 SALLAMNKRLCFGKEMKVNWATSP 89
>gi|67465872|ref|XP_649094.1| RNA-binding protein TIA-1 [Entamoeba histolytica HM-1:IMSS]
gi|56465456|gb|EAL43711.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449705857|gb|EMD45818.1| RNA-binding protein TIA-1, putative [Entamoeba histolytica KU27]
Length = 306
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/330 (36%), Positives = 178/330 (53%), Gaps = 48/330 (14%)
Query: 13 QQQSLYQYHPSLLAAPQIEPILSGNLPPRFDAS-----------TCRSVYVGNIHPQVTN 61
Q S YQY P APQ L PP+ ++ +SV+V IH V
Sbjct: 4 QYDSRYQYPPR---APQ----LYQQRPPQQSSTETTESSLPINANSKSVHVSGIHESVDE 56
Query: 62 ALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKV 117
LL +FS G + CK+++ DKS YGFV++ D +A A ++GR ++G+ +KV
Sbjct: 57 ILLGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKV 115
Query: 118 NWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
NW+Y + Q + G++ +FVG L PEV D L+ F F +DARV+ +TG+S+G+G
Sbjct: 116 NWSYTAQQ--ENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYG 173
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQSSDSKSVVELTNGIS 235
FV+F +EDA++A+ +NG+ L R I+ NW S E K+S D
Sbjct: 174 FVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYD------------ 221
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
E +NE + +N TVY+GN+ V S DL + G+IE+VR+ +DKG+ F+
Sbjct: 222 ---EINNETSSQN----CTVYIGNIPKNVESDDLKQLLAEY--GSIEEVRLNKDKGYAFI 272
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWG 325
++S H A AI M N +I+ G ++CSWG
Sbjct: 273 KFSKHESATSAILMCNGKIINGSTLRCSWG 302
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY+GNI V + L+++ + G +E +L KDK Y F+ + SA AI+ NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 109 HIFGQPIKVNWAYAS 123
I G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|407038416|gb|EKE39116.1| RNA-binding protein TIA-1, putative [Entamoeba nuttalli P19]
Length = 306
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/330 (35%), Positives = 177/330 (53%), Gaps = 48/330 (14%)
Query: 13 QQQSLYQYHPSLLAAPQIEPILSGNLPPRFDAS-----------TCRSVYVGNIHPQVTN 61
Q S YQY P P L PP+ +++ +SV+V IH V
Sbjct: 4 QYDSRYQYPPRT-------PQLYQQRPPQQNSTETTDSSLPINANSKSVHVSGIHESVDE 56
Query: 62 ALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKV 117
LL +FS G + CK+++ DKS YGFV++ D +A A ++GR ++G+ +KV
Sbjct: 57 ILLGRIFSIVGHVVSCKIMR-DKSGVHAGYGFVEFVDSTTARFAKDNMDGRVVYGRELKV 115
Query: 118 NWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
NW+Y + Q + G++ +FVG L PEV D L+ F F +DARV+ +TG+S+G+G
Sbjct: 116 NWSYTAQQ--ENQGNYKIFVGGLQPEVNDDLLYKTFQKFGRVTDARVLKFTQTGKSKGYG 173
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQSSDSKSVVELTNGIS 235
FV+F +EDA++A+ +NG+ L R I+ NW S E K+S D
Sbjct: 174 FVTFIRKEDAETAMQMMNGEKLEGRNIKVNWVTSNIASKTEQPKRSYD------------ 221
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
E +NE + +N TVY+GN+ V S DL + G+IE+VR+ +DKG+ F+
Sbjct: 222 ---EINNETSSQN----CTVYIGNIPKNVESDDLKQLLAEY--GSIEEVRLNKDKGYAFI 272
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWG 325
++S H A AI M N +I+ G ++CSWG
Sbjct: 273 KFSKHESATSAILMCNGKIINGSTLRCSWG 302
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY+GNI V + L+++ + G +E +L KDK Y F+ + SA AI+ NG+
Sbjct: 233 TVYIGNIPKNVESDDLKQLLAEYGSIEEVRL-NKDKG-YAFIKFSKHESATSAILMCNGK 290
Query: 109 HIFGQPIKVNWAYAS 123
I G ++ +W S
Sbjct: 291 IINGSTLRCSWGRES 305
>gi|449488383|ref|XP_002188190.2| PREDICTED: nucleolysin TIA-1-like, partial [Taeniopygia guttata]
Length = 537
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 171/299 (57%), Gaps = 33/299 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFSEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + K + +S
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA--PKSTFES 184
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
+S L+ + D +S APE + + F G I ++
Sbjct: 185 RS-GPLSPRVPDEAVQSVLPAPEQL-------------------MRQTFSPF--GQIMEI 222
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK------PTPPGTSSTP 337
RV DKG+ FVR+S+H AA AI N + G +KC WG + P P G S P
Sbjct: 223 RVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETADMAGPVPQGQLSYP 281
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFAC------ 152
AI + G+ + G+ I+ NWA ++ F G LSP V D + +
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKST--FESRSGPLSPRVPDEAVQSVLPAPEQ 207
Query: 153 -----FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
FS F + RV D +G+ FV F + E A AI +NG + ++C
Sbjct: 208 LMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCY 261
Query: 208 WAAKGA 213
W + A
Sbjct: 262 WGKETA 267
>gi|62088002|dbj|BAD92448.1| TIA1 protein variant [Homo sapiens]
Length = 464
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 180/323 (55%), Gaps = 45/323 (13%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 45 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 104
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 105 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 164
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 165 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKP 224
Query: 214 TS----------GDEKQ-----------SSDSKSVVELTNG-ISDGQEKSN-------ED 244
+ G+EK+ S + + E+ I +KSN E
Sbjct: 225 PAPKSTYECRCIGEEKEMWNFGEKYARFSCSRRLIAEIDEKQIKTTIQKSNTKQLSYDEV 284
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAA 304
+++P TVY G ++S +T + + F G I ++RV DKG+ FVR+++H AA
Sbjct: 285 VNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEIRVFPDKGYSFVRFNSHESAA 342
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
AI N + G +KC WG +
Sbjct: 343 HAIVSVNGTTIEGHVVKCYWGKE 365
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 47 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 104
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 105 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 145
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 146 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 203
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 204 QMGGQWLGGRQIRTNWATR-KPPAPKST 230
>gi|322693766|gb|EFY85615.1| TIA1 cytotoxic granule-associated RNA binding protein [Metarhizium
acridum CQMa 102]
Length = 444
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 165/296 (55%), Gaps = 49/296 (16%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R++YVG + +VT +L+++F +TG ++ K+I DK+
Sbjct: 84 RALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIP-DKNE--------------------- 121
Query: 108 RHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
I+VNWAY S S +EDTS HF++FVGDLS EV D L FS F T S+ARVM
Sbjct: 122 -------IRVNWAYQSNTSNKEDTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVM 174
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSGDEKQSSDS 224
WD KTGR+RG+GFV+FR++ DA+ A++ ++G+WLG+R IRCNWA KG S ++Q+ +
Sbjct: 175 WDMKTGRTRGYGFVAFRDRSDAEKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQA 234
Query: 225 KSVVELT---------NGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFH 274
+ T +G+ N+ P + TT YVGNL+ T D+ F
Sbjct: 235 MGLTPTTPFGHHQFPAHGVGSYDVVLNQ-----TPNWQTTCYVGNLTPYTTPNDVVPLFQ 289
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G + + R Q D+GF F++ TH AA+AI N + G+P+KCSWG TP
Sbjct: 290 NF--GFVVESRFQADRGFAFIKMDTHENAAMAICQMNGYNVNGRPLKCSWGKDKTP 343
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 47/208 (22%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S+ ++VG++ +V + +L + FS+ G + +++ K+ YGFV + DR A
Sbjct: 137 DTSSHFHIFVGDLSNEVNDDILLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAFRDRSDA 196
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTS-------------------------GHF 133
A+ +++G + + I+ NWA Q G +
Sbjct: 197 EKALSSMDGEWLGSRAIRCNWANQKGQPSIAQQQAMQAMGLTPTTPFGHHQFPAHGVGSY 256
Query: 134 NV------------FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+V +VG+L+P T + F F ++R D RGF F+
Sbjct: 257 DVVLNQTPNWQTTCYVGNLTPYTTPNDVVPLFQNFGFVVESRFQAD------RGFAFIKM 310
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWA 209
E+A AI +NG + R ++C+W
Sbjct: 311 DTHENAAMAICQMNGYNVNGRPLKCSWG 338
>gi|297687493|ref|XP_002821247.1| PREDICTED: nucleolysin TIAR isoform 2 [Pongo abelii]
gi|410976207|ref|XP_003994514.1| PREDICTED: nucleolysin TIAR isoform 2 [Felis catus]
Length = 393
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 171/306 (55%), Gaps = 35/306 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---------------- 86
D R++YVGN+ VT L+ ++FS GP + CK+I + S
Sbjct: 4 DDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHTS 63
Query: 87 ---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLS 141
Y FV++++ R AA A+ +NGR I G+ +KVNWA S ++ HF+VFVGDLS
Sbjct: 64 NDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKILPVNHFHVFVGDLS 123
Query: 142 PEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
PE+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG
Sbjct: 124 PEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGG 183
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLS 261
RQIR NWA + + Q +++K + ++ N+ +P+N TVY G ++
Sbjct: 184 RQIRTNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIA 231
Query: 262 SEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
S +T + + F G I ++RV +KG+ FVR+STH AA AI N + G +K
Sbjct: 232 SGLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVK 289
Query: 322 CSWGSK 327
C WG +
Sbjct: 290 CYWGKE 295
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 53/231 (22%)
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR----SRGFG----- 177
ED ++VG+LS +VT+ + FS C +++ +Q R S GF
Sbjct: 3 EDDGQPRTLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITEQPDSRRVNSSVGFSVLQHT 62
Query: 178 ------FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
FV F DA +A+ +NG+ + ++++ NWA S K ++ +
Sbjct: 63 SNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATT---------PSSQKKILPVN 113
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-- 289
+ V+VG+LS E+T+ D+ F G I D RV +D
Sbjct: 114 --------------------HFHVFVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMA 151
Query: 290 ----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
KG+GFV + +A AI + L G+ I+ +W ++ PP ST
Sbjct: 152 TGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATR-KPPAPKST 201
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 176/290 (60%), Gaps = 21/290 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALAIVTLN 106
+++YVGN+ VT LL +FS G ++GCK+I++ + Y FV++ + ++A+ A++ +N
Sbjct: 10 KTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNNDPYAFVEFVNHQAASTALIAMN 69
Query: 107 GRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
RH+ + IKVNWA + + ++DTS H ++FVGDLSPE+ TL F+ F S+ R+
Sbjct: 70 KRHVLEKEIKVNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRI 129
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS--S 222
+ D +T +S+G+ FVSF + +A+SAI+ +NG+WLGNR IR NW+ + ++S
Sbjct: 130 VRDPQTLKSKGYAFVSFVKKAEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTERSRQG 189
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
++K+V +E N+ +P N TVY G ++ + + + F GTI+
Sbjct: 190 NAKAV--------SYEEVYNQSSPTN----CTVYCGGFTNGINEDLIEKAFSRF--GTIQ 235
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQ-MGNARILCGKPIKCSWGSKPTPP 331
D+R +DKG+ F+R+ST A AI+ M NA I G+ +KC WG + + P
Sbjct: 236 DIRSFKDKGYAFIRFSTKEAATHAIEAMHNAEI-NGQQVKCFWGKESSDP 284
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 40/209 (19%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 90 PKQDTSSHHHIFVGDLSPEIEMHTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 149
Query: 96 RSAALAIVTLNGRHIFGQPIKVNW---------------------AYASSQREDTSGHFN 134
A AI +NG+ + + I+ NW +Y + + +
Sbjct: 150 AEAESAIHAMNGQWLGNRSIRTNWSTRKPPPPRTERSRQGNAKAVSYEEVYNQSSPTNCT 209
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+ G + + + + FS F T D R D +G+ F+ F +E A AI +
Sbjct: 210 VYCGGFTNGINEDLIEKAFSRFGTIQDIRSFKD------KGYAFIRFSTKEAATHAIEAM 263
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
+ + +Q++C W K+SSD
Sbjct: 264 HNAEINGQQVKCFWG---------KESSD 283
>gi|443687463|gb|ELT90434.1| hypothetical protein CAPTEDRAFT_110688, partial [Capitella teleta]
Length = 353
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/285 (37%), Positives = 168/285 (58%), Gaps = 20/285 (7%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLNGRH 109
YVGN+ P VT LL +F S GP +GCK+I + + Y FV++ + SAALA+ T+N R
Sbjct: 1 YVGNLDPTVTEDLLMALFGSIGPCKGCKIIHETGNEPYAFVEFSEHSSAALALGTMNKRT 60
Query: 110 IFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
FG+ +KVNWA + + ++DTS H ++FVGDLSP++ L F F T SD +++ D
Sbjct: 61 CFGREMKVNWATSPGTQTKQDTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRD 120
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
+T +S+G+GFVS+ +++A++AIN +NG+W+G+R IR NWA + + K+++
Sbjct: 121 PQTLKSKGYGFVSYVERKEAENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLT 180
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
+E +++P TVY G + S +T + F G IE++RV
Sbjct: 181 F-------------DEVFKKSSPTNCTVYCGGILSGLTEDLVRSAFGEH--GKIEEIRVF 225
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG--SKPTP 330
+DKG+ F+RY+T A AI + + G +KCSWG SK +P
Sbjct: 226 KDKGYAFIRYNTKEAATEAIVKMHQTEVGGHTVKCSWGKESKDSP 270
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ P + L+E F G + CK+I+ ++ YGFV Y +R+ A
Sbjct: 81 DTSKHHHIFVGDLSPDIETPQLREAFKPFGTISDCKIIRDPQTLKSKGYGFVSYVERKEA 140
Query: 99 ALAIVTLNGRHIFGQPIKVNWA------------------YASSQREDTSGHFNVFVGDL 140
AI ++NG+ I + I+ NWA + ++ + + V+ G +
Sbjct: 141 ENAINSMNGQWIGSRAIRTNWAIRKPAAPATKETNAQPLTFDEVFKKSSPTNCTVYCGGI 200
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
+T+ + + F + RV D +G+ F+ + +E A AI ++ +G
Sbjct: 201 LSGLTEDLVRSAFGEHGKIEEIRVFKD------KGYAFIRYNTKEAATEAIVKMHQTEVG 254
Query: 201 NRQIRCNWAAKGATS 215
++C+W + S
Sbjct: 255 GHTVKCSWGKESKDS 269
>gi|119223939|gb|AAI26843.1| TIAL1 protein [Bos taurus]
Length = 279
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/267 (41%), Positives = 163/267 (61%), Gaps = 18/267 (6%)
Query: 72 GPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQRED 128
GP + CK+I + S+ Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++D
Sbjct: 1 GPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKD 60
Query: 129 TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
TS HF+VFVGDLSPE+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA+
Sbjct: 61 TSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAE 120
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN 248
+AI + G+WLG RQIR NWA + + Q +++K Q + + ++
Sbjct: 121 NAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTK------------QLRFEDVVNQS 168
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+P+ TVY G ++S +T + + F G I ++RV +KG+ FVR+STH AA AI
Sbjct: 169 SPKNCTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIV 226
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSS 335
N + G +KC WG K +P T +
Sbjct: 227 SVNGTTIEGHVVKCYWG-KESPDMTKN 252
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 60 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 119
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 120 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 179
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV + +G+ FV F E A AI +NG +
Sbjct: 180 IASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI 233
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 234 EGHVVKCYWGKE 245
>gi|402587661|gb|EJW81596.1| nucleolysin TIAR [Wuchereria bancrofti]
Length = 440
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 26/289 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R+VYVGN+ P +T + +F G + K+I + Y FV++ D +AA A+ +N
Sbjct: 93 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 152
Query: 107 GRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R + + +KVNWA S + DTS HF+VFVGDLSPEV + L F+ F SDA+V
Sbjct: 153 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 212
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + T
Sbjct: 213 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG--------- 263
Query: 225 KSVVELTNGISDGQ----EKSNEDA-PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
G DGQ E + +D + P T+VYVGN++S DL F G
Sbjct: 264 -------TGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSNANDEDLRAAFDKF--G 314
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
I +VR+ + +G+ FVR+ A AI N + LCG+ IKCSWG P
Sbjct: 315 RILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 363
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRR 96
+ D S V+VG++ P+V N L++ F+ G + K+I+ YGFV Y R
Sbjct: 174 KVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKRE 233
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNVF 136
A AI +NG+ + + I+ NWA Y + + +V+
Sbjct: 234 EAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVY 293
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG+++ D L A F F + R+ +S+G+ FV F ++ A +AI +NG
Sbjct: 294 VGNVNSNANDEDLRAAFDKFGRILEVRIF------KSQGYAFVRFDKKDSACNAICKMNG 347
Query: 197 KWLGNRQIRCNWA 209
+ L + I+C+W
Sbjct: 348 QELCGQNIKCSWG 360
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTH 300
D + Q TVYVGNL +T + F +G + +V D + FV ++ H
Sbjct: 84 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQ--IGAVTKTKVIFDGTNDPYAFVEFADH 141
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKP 328
AA A+Q N R+L K +K +W ++P
Sbjct: 142 YTAAQALQAMNKRVLLEKEMKVNWATEP 169
>gi|170592088|ref|XP_001900801.1| RNA recognition motif. [Brugia malayi]
gi|158591668|gb|EDP30272.1| RNA recognition motif [Brugia malayi]
Length = 421
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 26/289 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R+VYVGN+ P +T + +F G + K+I + Y FV++ D +AA A+ +N
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 107 GRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R + + +KVNWA S + DTS HF+VFVGDLSPEV + L F+ F SDA+V
Sbjct: 134 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 193
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + T
Sbjct: 194 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG--------- 244
Query: 225 KSVVELTNGISDGQ----EKSNEDA-PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
G DGQ E + +D + P T+VYVGN++S DL F G
Sbjct: 245 -------TGAGDGQYGRSELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKF--G 295
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
I +VR+ + +G+ FVR+ A AI N + LCG+ IKCSWG P
Sbjct: 296 RILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 344
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRR 96
+ D S V+VG++ P+V N L++ F+ G + K+I+ YGFV Y R
Sbjct: 155 KVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKRE 214
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNVF 136
A AI +NG+ + + I+ NWA Y + + +V+
Sbjct: 215 EAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQYGRSELNYDDVYNQTGPDNTSVY 274
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG+++ D L A F F + R+ +S+G+ FV F ++ A +AI +NG
Sbjct: 275 VGNVNSSANDEDLRAAFDKFGRILEVRIF------KSQGYAFVRFDKKDSACNAICKMNG 328
Query: 197 KWLGNRQIRCNWA 209
+ L + I+C+W
Sbjct: 329 QELCGQNIKCSWG 341
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTH 300
D + Q TVYVGNL +T + F +G + +V D + FV ++ H
Sbjct: 65 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQ--IGAVTKTKVIFDGTNDPYAFVEFADH 122
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKP 328
AA A+Q N R+L K +K +W ++P
Sbjct: 123 YTAAQALQAMNKRVLLEKEMKVNWATEP 150
>gi|393909208|gb|EFO19127.2| hypothetical protein LOAG_09365 [Loa loa]
Length = 421
Score = 194 bits (493), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 26/289 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R+VYVGN+ P +T + +F G + K+I + Y FV++ D +AA A+ +N
Sbjct: 74 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 133
Query: 107 GRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R + + +KVNWA S + DTS HF+VFVGDLSPEV + L F+ F SDA+V
Sbjct: 134 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 193
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + T
Sbjct: 194 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG--------- 244
Query: 225 KSVVELTNGISDGQ----EKSNEDA-PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
G DGQ E + +D + P T+VYVGN++S DL F G
Sbjct: 245 -------TGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKF--G 295
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
I +VR+ + +G+ FVR+ A AI N + LCG+ IKCSWG P
Sbjct: 296 RILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 344
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 30/193 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRR 96
+ D S V+VG++ P+V N L++ F+ G + K+I+ YGFV Y R
Sbjct: 155 KVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKRE 214
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNVF 136
A AI +NG+ + + I+ NWA Y + + +V+
Sbjct: 215 EAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVY 274
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG+++ D L A F F + R+ +S+G+ FV F ++ A +AI +NG
Sbjct: 275 VGNVNSSANDEDLRAAFDKFGRILEVRIF------KSQGYAFVRFDKKDSACNAICKMNG 328
Query: 197 KWLGNRQIRCNWA 209
+ L + I+C+W
Sbjct: 329 QELCGQNIKCSWG 341
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTH 300
D + Q TVYVGNL +T + F +G + +V D + FV ++ H
Sbjct: 65 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQ--IGAVTKTKVIFDGTNDPYAFVEFADH 122
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKP 328
AA A+Q N R+L K +K +W ++P
Sbjct: 123 YTAAQALQAMNKRVLLEKEMKVNWATEP 150
>gi|312086091|ref|XP_003144941.1| hypothetical protein LOAG_09365 [Loa loa]
Length = 394
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 158/289 (54%), Gaps = 26/289 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R+VYVGN+ P +T + +F G + K+I + Y FV++ D +AA A+ +N
Sbjct: 47 RTVYVGNLDPSITEDFITTLFGQIGAVTKTKVIFDGTNDPYAFVEFADHYTAAQALQAMN 106
Query: 107 GRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R + + +KVNWA S + DTS HF+VFVGDLSPEV + L F+ F SDA+V
Sbjct: 107 KRVLLEKEMKVNWATEPGSQAKVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKV 166
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + T
Sbjct: 167 IRDATTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTG--------- 217
Query: 225 KSVVELTNGISDGQ----EKSNEDA-PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
G DGQ E + +D + P T+VYVGN++S DL F G
Sbjct: 218 -------TGAGDGQYGRTELNYDDVYNQTGPDNTSVYVGNVNSSANDEDLRAAFDKF--G 268
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
I +VR+ + +G+ FVR+ A AI N + LCG+ IKCSWG P
Sbjct: 269 RILEVRIFKSQGYAFVRFDKKDSACNAICKMNGQELCGQNIKCSWGRTP 317
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 30/192 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRR 96
+ D S V+VG++ P+V N L++ F+ G + K+I+ YGFV Y R
Sbjct: 128 KVDTSKHFHVFVGDLSPEVDNKALKDAFAPFGEVSDAKVIRDATTLKSKGYGFVSYPKRE 187
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNVF 136
A AI +NG+ + + I+ NWA Y + + +V+
Sbjct: 188 EAERAIEQMNGQWLGRRTIRTNWATRKPTGTGAGDGQYGRTELNYDDVYNQTGPDNTSVY 247
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG+++ D L A F F + R+ +S+G+ FV F ++ A +AI +NG
Sbjct: 248 VGNVNSSANDEDLRAAFDKFGRILEVRIF------KSQGYAFVRFDKKDSACNAICKMNG 301
Query: 197 KWLGNRQIRCNW 208
+ L + I+C+W
Sbjct: 302 QELCGQNIKCSW 313
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTH 300
D + Q TVYVGNL +T + F +G + +V D + FV ++ H
Sbjct: 38 DTGSEDHQPRTVYVGNLDPSITEDFITTLFGQ--IGAVTKTKVIFDGTNDPYAFVEFADH 95
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKP 328
AA A+Q N R+L K +K +W ++P
Sbjct: 96 YTAAQALQAMNKRVLLEKEMKVNWATEP 123
>gi|448114345|ref|XP_004202551.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359383419|emb|CCE79335.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/354 (36%), Positives = 175/354 (49%), Gaps = 62/354 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
+YVG +H V+ +L+++FSS G ++ K + DK+ SY FV++ + SA LA+ TL
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLN-DKNRPGFSYAFVEFENSDSADLALRTL 132
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
NGR + IK+NWAY SS S H FN+FVGDLSPEV D +L FS F + A
Sbjct: 133 NGRMVNNSVIKINWAYQSSAVSTASQHEPFFNIFVGDLSPEVDDESLHKAFSKFESLRQA 192
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA------------ 210
VMWD +T RSRG+GFVSF NQ DA+ A+ +NG+W+G R IRCNWA+
Sbjct: 193 HVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHKQFNNPKFRAG 252
Query: 211 --KGATSGDEKQSS-------------------DSKSVVELTNGISDGQEKSNEDAPENN 249
+ A G+ + S S++ G G + + P +
Sbjct: 253 NNRYANHGNRQYRSFHANPMQAQLHNQPIMPGLQSQASTAFQPGAGSGNQS---NIPIMS 309
Query: 250 PQ------------YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRY 297
PQ TTVY+GN++ DL G I D + +KG FV Y
Sbjct: 310 PQSFDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNF--GFIVDFKFHPEKGCAFVNY 367
Query: 298 STHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP---PPPAPHLPG 348
+H AALAI + G+P+KC WG K PP P PP+ + PG
Sbjct: 368 DSHERAALAIVQLAGFTINGRPLKCGWG-KERPPINQFQGFPRGVAPPSLYPPG 420
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
+++VG++ P+V + L + FS L ++ ++S YGFV + ++ A LA+ T
Sbjct: 164 NIFVGDLSPEVDDESLHKAFSKFESLRQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQT 223
Query: 105 LNGRHIFGQPIKVNWA 120
+NG I G+ I+ NWA
Sbjct: 224 MNGEWIGGRAIRCNWA 239
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 33/159 (20%)
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA 245
D + +N++N N +GD+ +SS + +V G+E SN
Sbjct: 31 DKSNNVNEIN---------EMNTKDNSNNNGDQSESSPASAV-------DGGREISN--- 71
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTH 300
T +YVG L V S D+ R + C G ++ ++ DK + FV +
Sbjct: 72 -------TILYVGGLHKSV-SEDVLRDLFSSC-GGVKSIKTLNDKNRPGFSYAFVEFENS 122
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP 339
A LA++ N R++ IK +W + + T+S P
Sbjct: 123 DSADLALRTLNGRMVNNSVIKINWAYQSSAVSTASQHEP 161
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 162/294 (55%), Gaps = 16/294 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALA 101
D S R++YVGN+ P VT LL +F++ GP+ CK+I++ S Y F+++ AA A
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSDPYAFLEFDTHSGAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +NGR + +KVNWA + + DTS H+++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNGRLFLDKEMKVNWATTPGNQPKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + DA++AIN +NG+WLG+R IR NW+ +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKSDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRAP 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
V + N+ +P N TVY G + +T + + F G
Sbjct: 183 NKYSGYRAVTF-------DDVYNQSSPTN----CTVYCGGIVEGLTEELVEQVFSRF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
TI ++R RDKG+ F+++ST A AI+ + + G P+KC WG + P +
Sbjct: 230 TIVEIRAFRDKGYAFIKFSTKEAATTAIEAVHNTEINGHPVKCFWGKESGDPNS 283
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 89/202 (44%), Gaps = 33/202 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKLDTSNHYHIFVGDLSPEIETHTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNV 135
A AI ++NG+ + + I+ NW+ + + + + V
Sbjct: 148 SDAENAINSMNGQWLGSRSIRTNWSTRKPPPPRAPNKYSGYRAVTFDDVYNQSSPTNCTV 207
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G + +T+ + FS F T + R R +G+ F+ F +E A +AI ++
Sbjct: 208 YCGGIVEGLTEELVEQVFSRFGTIVEIRAF------RDKGYAFIKFSTKEAATTAIEAVH 261
Query: 196 GKWLGNRQIRCNWAAKGATSGD 217
+ ++C W G SGD
Sbjct: 262 NTEINGHPVKCFW---GKESGD 280
>gi|148666753|gb|EDK99169.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_c
[Mus musculus]
Length = 293
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 154/252 (61%), Gaps = 17/252 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 15 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 74
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 75 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 134
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 135 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 194
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K Q +E +++P TVY G ++S +T + + F G I ++
Sbjct: 195 K------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 240
Query: 285 RVQRDKGFGFVR 296
RV DKG+ FVR
Sbjct: 241 RVFPDKGYSFVR 252
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 29/160 (18%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 98 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 157
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 158 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 217
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
++ +T+ + FS F + RV D +G+ FV
Sbjct: 218 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFV 251
>gi|255760011|ref|NP_001157551.1| nucleolysin TIA-1 isoform 3 [Mus musculus]
gi|23271442|gb|AAH23813.1| Tia1 protein [Mus musculus]
Length = 285
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 154/252 (61%), Gaps = 17/252 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNT 186
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K Q +E +++P TVY G ++S +T + + F G I ++
Sbjct: 187 K------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEI 232
Query: 285 RVQRDKGFGFVR 296
RV DKG+ FVR
Sbjct: 233 RVFPDKGYSFVR 244
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 29/160 (18%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------EDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y S+ + + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQSSPNNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
++ +T+ + FS F + RV D +G+ FV
Sbjct: 210 VTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFV 243
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 167/288 (57%), Gaps = 20/288 (6%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALAIVTLNGRH 109
YVGN+ P VT L+ +F G ++GCK+I + Y FV++ + SAA A+ +N R+
Sbjct: 1 YVGNLDPSVTEELIMVLFGQIGTVKGCKIIHEPGHEPYCFVEFAEHHSAAAALAAMNKRN 60
Query: 110 IFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
G+ +KVNWA + ++ ++DTS HF++FVGDLSPE+ TL F+ F SD RV+ D
Sbjct: 61 CMGREMKVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRD 120
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
+T +S+G+GFVSF + DA++AI +NG+WLG R IR NWA + + + S S
Sbjct: 121 PQTLKSKGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPA-PKDAGSKPMSY 179
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
E+ GQ S TVY GNL+ T L + F G I+++RV
Sbjct: 180 EEVF-----GQSSSTN---------CTVYCGNLAQGSTEEALQKIFGPY--GQIQEIRVF 223
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
+DKG+ F+R+++ A AI + L G+ +KCSWG +P PG+++
Sbjct: 224 KDKGYAFIRFASKESATQAIVSVHNTDLNGQNVKCSWGKEPGEPGSAN 271
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 26/197 (13%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L++ F++ G + C++++ ++ YGFV + +
Sbjct: 78 PKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKSKGYGFVSFVKK 137
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----------------YASSQREDTSGHFNVFVGD 139
A AI +NG+ + + I+ NWA Y + +S + V+ G+
Sbjct: 138 SDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQSSSTNCTVYCGN 197
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
L+ T+ L F + + RV D +G+ F+ F ++E A AI ++ L
Sbjct: 198 LAQGSTEEALQKIFGPYGQIQEIRVFKD------KGYAFIRFASKESATQAIVSVHNTDL 251
Query: 200 GNRQIRCNWAAKGATSG 216
+ ++C+W + G
Sbjct: 252 NGQNVKCSWGKEPGEPG 268
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/288 (35%), Positives = 166/288 (57%), Gaps = 15/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S R++YVGN+ V+ LL +FS G ++GCK+I++ Y FV++ + +SAA A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQSAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AIN +NG+WLG+R IR NW+ + +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S N + +E N+ +P N TVY G ++ +T + + F G
Sbjct: 183 RPRHSN------NSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELIKKTFSPF--G 230
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
TI+D+RV +DKG+ F++++T A AI+ + + G +KC WG +
Sbjct: 231 TIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKE 278
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YASSQREDTSGHFN 134
A AI +NG+ + + I+ NW+ Y + + +
Sbjct: 148 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+ G + +TD + FS F T D RV D +G+ F+ F +E A AI
Sbjct: 208 VYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 195 NGKWLGNRQIRCNWAAKGATSGD 217
+ + ++C W G +GD
Sbjct: 262 HNTEINGSIVKCFW---GKENGD 281
>gi|354491765|ref|XP_003508025.1| PREDICTED: nucleolysin TIAR-like [Cricetulus griseus]
Length = 285
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 154/252 (61%), Gaps = 17/252 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDARV
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARV 126
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA ++
Sbjct: 127 VKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWAT--------RKPPAP 178
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
KS EL Q +E +++P TVY G ++S +T + + F G I ++
Sbjct: 179 KSTYELNT----KQLSYDEVVSQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF--GQILEI 232
Query: 285 RVQRDKGFGFVR 296
RV DKG+ F+R
Sbjct: 233 RVFPDKGYSFIR 244
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 90 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 149
Query: 99 ALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFVGD 139
AI + G+ + G+ I+ NWA Y + + + V+ G
Sbjct: 150 ENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYELNTKQLSYDEVVSQSSPSNCTVYCGG 209
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
++ +T+ + FS F + RV D +G+ F+
Sbjct: 210 VTSGLTEQLMRQTFSPFGQILEIRVFPD------KGYSFI 243
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 ASKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 82/211 (38%), Gaps = 48/211 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREASKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
F+ F +E A AI + + ++C W
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFW 291
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 168/299 (56%), Gaps = 15/299 (5%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F GP++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + ++ + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRE 180
Query: 219 KQSS--------DSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL 269
S NGI + Q + E+ +++P TTVY G V S +L
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDEL 240
Query: 270 -HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
H+HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 MHKHF--MQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGKE 297
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 85/217 (39%), Gaps = 51/217 (23%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA--------------------------------YAS 123
A AI ++NG+ I + I+ NW+ +
Sbjct: 147 AEAENAIQSMNGQWIGSRNIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 124 SQREDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSR 174
+QR +N V+ G P V +D + F F D RV D +
Sbjct: 207 NQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------K 260
Query: 175 GFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
GF F+ F +E A AI + + ++C W +
Sbjct: 261 GFAFIKFVTKEAAARAIEHTHNSEVHGNHVKCFWGKE 297
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 168/289 (58%), Gaps = 18/289 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P V+ LL +FS GP++GCK+I++ Y FV++ + +SA+ A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + ++DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRLFLDKEMKVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+ K E
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTE 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
K + +K Q +E +++P TVY G ++ +T + + F
Sbjct: 183 KAAQRAK------------QPTFDEVYNQSSPTNCTVYCGGFTTGLTEDLMQKTFSQF-- 228
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I+D+RV +DKG+ F++++T A AI+ + + G+ +KC WG +
Sbjct: 229 GVIQDIRVFKDKGYAFIKFATKESATHAIETIHNTEINGQMVKCFWGKE 277
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 30/201 (14%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY---------ASSQR-----------EDTSGHFNV 135
A AI +NG+ + + I+ NW+ ++QR + + + V
Sbjct: 148 AEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTFDEVYNQSSPTNCTV 207
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G + +T+ + FS F D RV D +G+ F+ F +E A AI ++
Sbjct: 208 YCGGFTTGLTEDLMQKTFSQFGVIQDIRVFKD------KGYAFIKFATKESATHAIETIH 261
Query: 196 GKWLGNRQIRCNWAAKGATSG 216
+ + ++C W + G
Sbjct: 262 NTEINGQMVKCFWGKENGGMG 282
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 51/218 (23%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D S ++VG+L P V++ L FS +++ + + + FV F N + A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKII---REPGNDPYAFVEFTNHQSA 59
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+A+ +N + +++++ NWA +P
Sbjct: 60 STALAAMNKRLFLDKEMKVNWAT----------------------------------SPG 85
Query: 248 NNPQYTT-----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVR 296
N P+ T ++VG+LS E+ + L F G I + R+ RD KG+ FV
Sbjct: 86 NQPKQDTSNHHHIFVGDLSPEIETETLREAFAPF--GEISNCRIVRDPQTLKSKGYAFVS 143
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGS-KPTPPGT 333
+ EA AIQ N + L + I+ +W + KP PP T
Sbjct: 144 FVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKT 181
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 165/297 (55%), Gaps = 13/297 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRVFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG------ 212
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-H 270
+T + GI Q + E+ +++P TTVY G V S DL H
Sbjct: 181 STKAGGQGGGMGGGGPGNGTGIKSNQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 240
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+HF + G I+DVRV ++KGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 KHF--MQFGPIQDVRVFKEKGFAFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGKE 295
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 86/215 (40%), Gaps = 49/215 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------------------------YASSQ 125
A AI +NG+ I + I+ NW+ S+Q
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESTKAGGQGGGMGGGGPGNGTGIKSNQ 206
Query: 126 REDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
R +N V+ G P V +D + F F D RV + +GF
Sbjct: 207 RHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFMQFGPIQDVRVF------KEKGF 260
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + Q++C W +
Sbjct: 261 AFIKFVTKEAAARAIEHTHISEVHGSQVKCFWGKE 295
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 166/296 (56%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 167/296 (56%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 170/304 (55%), Gaps = 25/304 (8%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDR 95
+ P D R++YVGN+ VT L+ +FS G ++GCK+I + S Y FV++ +
Sbjct: 2 SFPSPQDGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSDPYCFVEFVNH 61
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQ-----REDTSGHFNVFVGDLSPEVTDATLF 150
A+ AI +N R G+ ++VNWA ++ Q R DTS H ++FVGDLSP++ + L
Sbjct: 62 SDASSAITAMNARMCLGRELRVNWASSAIQQQTPHRPDTSKHHHIFVGDLSPQIETSDLR 121
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
FS F SD RV+ D T +S+G+GFVSF N++DA++AI+ ++G WLG+R IR NWA+
Sbjct: 122 EAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTMDGSWLGSRAIRTNWAS 181
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKS---NEDAPENNPQYTTVYVGNLSSEVTSV 267
+ K + T G ++ +E +++P TVY G L+ +S
Sbjct: 182 R-------------KPNHKETGSYIGGHHRALNYDEVFAQSSPSNCTVYCGGLNQMASSE 228
Query: 268 DLHRH-FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
D R F G I D+R+ +DKG+ F+++++ A AI + + G+ +KCSWG
Sbjct: 229 DFLRQAFDEF--GEIVDIRLFKDKGYAFIKFNSKESACRAIVARHNSDIGGQAVKCSWGK 286
Query: 327 KPTP 330
+ P
Sbjct: 287 EQEP 290
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 245 APENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG---FGFVRYSTHP 301
+P++ Q T+YVGNL S VT + F + G I+ ++ + G + FV + H
Sbjct: 5 SPQDGGQPRTLYVGNLDSGVTEDLVCALFSQM--GQIKGCKIIHEPGSDPYCFVEFVNHS 62
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH 345
+A+ AI NAR+ G+ ++ +W S TP P + H
Sbjct: 63 DASSAITAMNARMCLGRELRVNWASSAI---QQQTPHRPDTSKH 103
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 166/285 (58%), Gaps = 18/285 (6%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
+++YVGN+ VT LL +F G ++ CK+I++ S Y F++Y + +SA A+ +N
Sbjct: 8 KTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYANHQSAQTALAAMN 67
Query: 107 GRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
R + IKVNWA + + DTS H ++FVGDLSPE+ TL F+ F S+ R+
Sbjct: 68 KRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRI 127
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D +T +SRG+ FVSF + +A++AI +NG+WLG+R IR NW+ + K +
Sbjct: 128 VRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTR-------KPPAPR 180
Query: 225 KSVVELTNGISDG-QEKSNEDAPENNPQYTTVYVGNL-SSEVTSVDLHRHFHALCVGTIE 282
+++ + +G + G +E N P N TTVY G ++ + + +H+HF G I+
Sbjct: 181 ENIKGIKSGKTPGFEEIYNNTGPTN----TTVYCGGFPANAINDMLIHKHFGLF--GQIQ 234
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DVRV +DKG+ F++++ AA AI+ + + G +KC WG +
Sbjct: 235 DVRVFKDKGYAFIKFNNKESAARAIEGTHNSEIQGYAVKCYWGKE 279
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSG-------------------HFN 134
A AI +NG+ + + I+ NW+ + RE+ G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENIKGIKSGKTPGFEEIYNNTGPTNTT 207
Query: 135 VFVGDL-SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
V+ G + + D + F +F D RV D +G+ F+ F N+E A AI
Sbjct: 208 VYCGGFPANAINDMLIHKHFGLFGQIQDVRVFKD------KGYAFIKFNNKESAARAIEG 261
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+ + ++C W G +G E S+
Sbjct: 262 THNSEIQGYAVKCYW---GKENGGEMASN 287
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/302 (34%), Positives = 167/302 (55%), Gaps = 22/302 (7%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F GP++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + ++ + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 219 KQSS------------DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
S + + N +E N+ +P N TTVY G V S
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNQRHTFEEVYNQSSPTN----TTVYCGGFPPNVIS 236
Query: 267 VDL-HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+L H+HF + G I+DVRV +DKGF F+++ + AA AI+ + + G +KC WG
Sbjct: 237 DELMHKHF--MQFGPIQDVRVFKDKGFAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWG 294
Query: 326 SK 327
+
Sbjct: 295 KE 296
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 50/216 (23%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------------------------YASS 124
A AI +NG+ I + I+ NW+ +
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 125 QREDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
QR +N V+ G P V +D + F F D RV D +G
Sbjct: 207 QRHTFEEVYNQSSPTNTTVYCGGFPPNVISDELMHKHFMQFGPIQDVRVFKD------KG 260
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F F+ F ++E A AI + + ++C W +
Sbjct: 261 FAFIKFVSKEAAARAIEHTHNSEVHGNHVKCFWGKE 296
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 90/215 (41%), Gaps = 40/215 (18%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D S ++VG+L V++ L A F +++ + + + F+ + N + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKII---REPGNDPYAFIEYSNYQAA 58
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+A+ +N + +++I+ NWA TS +D S
Sbjct: 59 STALTAMNKRVFLDKEIKVNWA----TSPGNTPKTDISS--------------------- 93
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
+ ++VG+LS E+ + L F G I + R+ RD KG+ FV +
Sbjct: 94 ----HHHIFVGDLSPEIETETLREAFAPF--GEISNCRIVRDPQTMKSKGYAFVSFVKKA 147
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
EA AIQ N + + + I+ +W ++ PP S+
Sbjct: 148 EAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESS 182
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/299 (34%), Positives = 168/299 (56%), Gaps = 15/299 (5%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F GP++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + ++ + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRVFLDKEIKVNWATSPGNTPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 219 KQSS--------DSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL 269
S NGI + Q + E+ +++P TTVY G V S +L
Sbjct: 181 SSKSGGQGGGMGGMGGGGGAGNGIKNNQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDEL 240
Query: 270 -HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
H+HF + G I+DVRV +DKGF F+++ AA AI+ + + G +KC WG +
Sbjct: 241 MHKHF--MQFGPIQDVRVFKDKGFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFWGKE 297
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 85/214 (39%), Gaps = 51/214 (23%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA--------------------------------YAS 123
A AI +NG+ I + I+ NW+ +
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKSGGQGGGMGGMGGGGGAGNGIKN 206
Query: 124 SQR--------EDTSGHFNVFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSR 174
+QR + + + V+ G P V +D + F F D RV D +
Sbjct: 207 NQRHTFEEVYSQSSPTNTTVYCGGFQPHVISDELMHKHFMQFGPIQDVRVFKD------K 260
Query: 175 GFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
GF F+ F +E A AI + + ++C W
Sbjct: 261 GFAFIKFVAKEAAARAIEHTHNTEVHGNHVKCFW 294
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 164/290 (56%), Gaps = 18/290 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-SSYGFVDYFDRRSAALA 101
+ S +++YVGN+ VT LL +FS G ++ CK+I++ + F++Y + +SA A
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRETSIDPFAFIEYANHQSAQTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + I+VNWA ++ + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRMFLKKEIRVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +SRG+ FVSF + +A++AI +NG+WLG+R IR NW+ + + E
Sbjct: 123 SNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPREN 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPEN-NPQYTTVYVGNL-SSEVTSVDLHRHFHALC 277
+ GI G+ E+ N +P TTVY G + +T + +HF
Sbjct: 183 -----------SKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNAITDELIQKHFAQF- 230
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I D RV +DKG+ F+R+++ AA AI+ + + G P+KC WG +
Sbjct: 231 -GHINDTRVFKDKGYAFIRFASKESAARAIEGTHNSEVQGHPVKCYWGKE 279
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 32/198 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSG-------------------HFN 134
A AI +NG+ + + I+ NW+ + RE++ G +
Sbjct: 148 AEAENAIAMMNGQWLGSRSIRTNWSTRKPPAPRENSKGIKSGKTPGFEEIYNNTSPTNTT 207
Query: 135 VFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
V+ G P +TD + F+ F +D RV D +G+ F+ F ++E A AI
Sbjct: 208 VYCGGFPPNAITDELIQKHFAQFGHINDTRVFKD------KGYAFIRFASKESAARAIEG 261
Query: 194 LNGKWLGNRQIRCNWAAK 211
+ + ++C W +
Sbjct: 262 THNSEVQGHPVKCYWGKE 279
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 168/294 (57%), Gaps = 15/294 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S R++YVGN+ V+ LL +FS G ++GCK+I++ Y FV++ + + AA A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AIN +NG+WLG+R IR NW+ + +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S N + +E N+ +P N TVY G ++ +T + + F G
Sbjct: 183 RPRHSN------NSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELIKKTFSPF--G 230
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
TI+D+RV +DKG+ F++++T A AI+ + + G +KC WG + P +
Sbjct: 231 TIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNS 284
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YASSQREDTSGHFN 134
A AI +NG+ + + I+ NW+ Y + + +
Sbjct: 148 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+ G + +TD + FS F T D RV D +G+ F+ F +E A AI
Sbjct: 208 VYCGGFTNGITDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 195 NGKWLGNRQIRCNWAAKGATSGD 217
+ + ++C W G +GD
Sbjct: 262 HNTEINGSIVKCFW---GKENGD 281
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 163/296 (55%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F + G ++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPQTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 219 KQSSDSKSVVELTNGISDGQEKSN------EDAPENNPQYTTVYVGNLSSEVTSVDL-HR 271
+ G KSN E +++P TTVY G V S DL H+
Sbjct: 181 SSKGGGLGGGMGGGPGNGGGVKSNQRHTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HFGQF--GPIQDVRVFKDKGFAFIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGKE 294
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 85/214 (39%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ S+QR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESSKGGGLGGGMGGGPGNGGGVKSNQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFDEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFGQFGPIQDVRVFKD------KGFA 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F ++ A AI + + ++C W +
Sbjct: 261 FIKFVTKDSAAHAIEHTHNTEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 40/215 (18%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D S ++VG+L V++ L A F + +++ + + + F+ + N + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKII---REPGNDPYAFIEYSNYQAA 58
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+A+ +N + ++I+ NWA TS + +D S
Sbjct: 59 STALTAMNKRLFLEKEIKVNWA----TSPGNQPKTDISS--------------------- 93
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
+ ++VG+LS E+ + L F G I + R+ RD KG+ FV +
Sbjct: 94 ----HHHIFVGDLSPEIETETLREAFAPF--GEISNCRIVRDPQTMKSKGYAFVSFVKKA 147
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
EA AIQ N + + + I+ +W ++ PP S+
Sbjct: 148 EAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRESS 182
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 161/290 (55%), Gaps = 18/290 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S +++YVGN+ VT LL +FS G ++ CK+I++ Y F++Y SA A
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDPYAFIEYASHTSAQTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + IKVNWA + + DTS H+++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRFFLKKEIKVNWATSPGNQPKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +SRG+ FVSF + +A++AI +NG+WLG+R IR NW+ + + +
Sbjct: 123 SNCRIVRDPQTLKSRGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRDN 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPEN-NPQYTTVYVGNL-SSEVTSVDLHRHFHALC 277
+ GI G+ E+ N +P TTVY G + +T + +HF
Sbjct: 183 -----------SKGIKSGKTPGFEEIYNNTSPTNTTVYCGGFPPNTITDELIQKHFAQF- 230
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I D RV +DKG+ F+R++ AA AI+ + + G P+KC WG +
Sbjct: 231 -GQIHDTRVFKDKGYAFIRFANKESAARAIEGTHNSEVQGHPVKCYWGKE 279
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSQHYHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSRGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSG-------------------HFN 134
A AI +NG+ + + I+ NW+ + R+++ G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRDNSKGIKSGKTPGFEEIYNNTSPTNTT 207
Query: 135 VFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
V+ G P +TD + F+ F D RV D +G+ F+ F N+E A AI
Sbjct: 208 VYCGGFPPNTITDELIQKHFAQFGQIHDTRVFKD------KGYAFIRFANKESAARAIEG 261
Query: 194 LNGKWLGNRQIRCNWAAK 211
+ + ++C W +
Sbjct: 262 THNSEVQGHPVKCYWGKE 279
>gi|38141765|dbj|BAD00701.1| TIA-1 homologue [Bombyx mori]
Length = 388
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/306 (34%), Positives = 170/306 (55%), Gaps = 18/306 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P VT L +F G ++GCK+I++ Y F+++ +A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ K G
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVN 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ + SK + T E N+ +P N TTVY G +S + + +L ++ +
Sbjct: 183 EGAPSSKRAKQPTF-----DEVYNQSSPTN----TTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK----PTPPGTS 334
G I+D+RV RDKG+ F+R++T AA AI + + G +KC WG + G +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKENGGAENQSGNN 292
Query: 335 STPLPP 340
S+ PP
Sbjct: 293 SSAAPP 298
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 94/217 (43%), Gaps = 36/217 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY------------ASSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + +T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV 228
+ + ++C W + G E QS ++ S
Sbjct: 262 GATHNTEISGHTVKCFWGKE--NGGAENQSGNNSSAA 296
>gi|259648115|dbj|BAI40365.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/289 (35%), Positives = 164/289 (56%), Gaps = 14/289 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P VT L +F G ++GCK+I++ Y F+++ +A A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAVTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ K G
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVN 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ + SK + T E N+ +P N TTVY G +S + + +L ++ +
Sbjct: 183 EGAPSSKRAKQPTF-----DEVYNQSSPTN----TTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I+D+RV RDKG+ F+R++T AA AI + + G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIGATHNTEISGHTVKCFWGKE 281
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY------------ASSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + +T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAK-GATSGDEKQSSDSKSVV 228
+ + ++C W + G + ++DS S V
Sbjct: 262 GATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTV 299
>gi|390359470|ref|XP_782936.3| PREDICTED: nucleolysin TIAR-like [Strongylocentrotus purpuratus]
Length = 430
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 159/288 (55%), Gaps = 24/288 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGP--LEGCKLIKKDKSS--YGFVDYFDRRSAALAIV 103
R++YVGN+ +VT L+ ++F P + CK+I +S Y FV+++D +A A+V
Sbjct: 25 RTLYVGNLDRRVTEELVFQLFLQIAPSKTKSCKMIADHGNSDPYCFVEFYDSVTAEAAMV 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+NGR +F +PIKVNWA R+DT+ H +VFVGDL E+ A L A F + + +DAR
Sbjct: 85 AMNGRTVFDKPIKVNWATTQGSRKDTTHHHHVFVGDLVQEMKTAELRALFDKYGSITDAR 144
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL----GNRQIRCNWAAKGATSGDEK 219
V+ D +TG+SR +GFVSF +EDAQ AI ++NG L G + IR WA + TS
Sbjct: 145 VVRDPETGKSRCYGFVSFEQEEDAQCAIKEMNGAILPQYPGMKAIRTGWATRKPTSHKPP 204
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q D + NE +P N TVYVG L + ++ DL R G
Sbjct: 205 QIE-----------AKDYERVLNETSPNN----CTVYVGGLQFKFSAEDLLRKVFGP-FG 248
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I++VR +K F FVR++ H A AI + + G +KCSWG +
Sbjct: 249 AIQEVRTFPEKAFAFVRFANHESATNAIVSVHGSPIEGHVVKCSWGKE 296
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 31/205 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRR 96
R D + V+VG++ ++ A L+ +F G + ++++ ++ YGFV +
Sbjct: 107 RKDTTHHHHVFVGDLVQEMKTAELRALFDKYGSITDARVVRDPETGKSRCYGFVSFEQEE 166
Query: 97 SAALAIVTLNGRHIFGQP----IKVNWA----------------YASSQREDTSGHFNVF 136
A AI +NG + P I+ WA Y E + + V+
Sbjct: 167 DAQCAIKEMNGAILPQYPGMKAIRTGWATRKPTSHKPPQIEAKDYERVLNETSPNNCTVY 226
Query: 137 VGDLSPEVTDATLF-ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
VG L + + L F F + R T + F FV F N E A +AI ++
Sbjct: 227 VGGLQFKFSAEDLLRKVFGPFGAIQEVR------TFPEKAFAFVRFANHESATNAIVSVH 280
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQ 220
G + ++C+W + S +Q
Sbjct: 281 GSPIEGHVVKCSWGKESNESSGFQQ 305
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 166/296 (56%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F + GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 165/296 (55%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +F + GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG-----A 213
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ +
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
S Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIHDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +NG+ I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIHDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 167/294 (56%), Gaps = 15/294 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S R++YVGN+ V+ LL +FS G ++GCK+I++ Y FV++ + + AA A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+ + +
Sbjct: 123 SNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S N + +E N+ +P N TVY G ++ +T +++ F G
Sbjct: 183 RPRHSN------NSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDELINKTFSPF--G 230
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
TI+D+RV +DKG+ F++++T A AI+ + + G +KC WG + P +
Sbjct: 231 TIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNS 284
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YASSQREDTSGHFN 134
A AI +NG+ + + I+ NW+ Y + + +
Sbjct: 148 SEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+ G + +TD + FS F T D RV D +G+ F+ F +E A AI
Sbjct: 208 VYCGGFTNGITDELINKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 195 NGKWLGNRQIRCNWAAKGATSGD 217
+ + ++C W G +GD
Sbjct: 262 HNTEINGSIVKCFW---GKENGD 281
>gi|258570067|ref|XP_002543837.1| OsGRP2 protein [Uncinocarpus reesii 1704]
gi|237904107|gb|EEP78508.1| OsGRP2 protein [Uncinocarpus reesii 1704]
Length = 370
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/251 (42%), Positives = 145/251 (57%), Gaps = 22/251 (8%)
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPE 143
+YGFV+Y D +A A+ TLNGR + I+VNWAY S+ +EDTS HF++FVGDLS E
Sbjct: 40 NYGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWAYQSNNNNKEDTSNHFHIFVGDLSNE 99
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V D L FS F + S+ARVMWD KTGRSRG+GFV+FR + DA+ A++ ++G+WLG+R
Sbjct: 100 VNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALSSMDGEWLGSRA 159
Query: 204 IRCNWA-AKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
IRCNWA KG S ++Q+ + + T P + + T V +
Sbjct: 160 IRCNWANQKGQPSISQQQAMAAMGMTPTT--------------PFGHHHFPTHGVQSYDM 205
Query: 263 EVTSVDLHRHFH-ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
V + AL + T R Q D+GF FV+ TH AA+AI N + G+P+K
Sbjct: 206 VVQQTPQWQTTTLALSLKT----RFQADRGFAFVKMDTHENAAMAICQLNGYNVNGRPLK 261
Query: 322 CSWGSKPTPPG 332
CSWG P G
Sbjct: 262 CSWGKDRPPTG 272
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV + + A+ A+ LNG+ + +IR NWA
Sbjct: 41 YGFVEYDDPGAAERAMQTLNGRRVHQSEIRVNWA-------------------------- 74
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RD 289
+SN + E+ + ++VG+LS+EV L + F A G++ + RV R
Sbjct: 75 ---YQSNNNNKEDTSNHFHIFVGDLSNEVNDEVLLQAFSAF--GSVSEARVMWDMKTGRS 129
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
+G+GFV + +A A+ + L + I+C+W ++ P S
Sbjct: 130 RGYGFVAFRERADAEKALSSMDGEWLGSRAIRCNWANQKGQPSIS 174
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D S ++VG++ +V + +L + FS+ G + +++ K+ YGFV + +R A
Sbjct: 84 DTSNHFHIFVGDLSNEVNDEVLLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADA 143
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +++G + + I+ NWA Q + +G +T T F FPT
Sbjct: 144 EKALSSMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMG-----MTPTTPFGHHH-FPT 197
Query: 159 -----------------CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
+ + + RGF FV E+A AI LNG +
Sbjct: 198 HGVQSYDMVVQQTPQWQTTTLALSLKTRFQADRGFAFVKMDTHENAAMAICQLNGYNVNG 257
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
R ++C+W +G S + T+G S
Sbjct: 258 RPLKCSWGKDRPPTGQFDYSPQQGASPAFTSGTS 291
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 161/290 (55%), Gaps = 18/290 (6%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALA 101
D + +++YVGN+ VT LL +F G ++ CK+I++ S Y F++Y +SA A
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSDPYAFIEYASHQSAQTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + IKVNWA + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRLFLKKEIKVNWATSPGNQPKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+ + + E
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPREN 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENN-PQYTTVYVGNLSSEVTSVDLHR-HFHALC 277
T GI G+ E+ N P TTVY G S +L + HF
Sbjct: 183 -----------TKGIKSGKTPGFEEIYNNTGPTNTTVYCGGFPPNTISDNLIKTHFGQF- 230
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G+I DVRV +DKG+ F+++ + AA AI+ + + G P+KC WG +
Sbjct: 231 -GSIHDVRVFKDKGYAFIKFISKEAAARAIEGTHNSEVQGHPVKCYWGKE 279
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 87/198 (43%), Gaps = 32/198 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSQHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYAS--SQREDTSG-------------------HFN 134
A AI +NG+ + + I+ NW+ + RE+T G +
Sbjct: 148 AEAENAIQMMNGQWLGSRSIRTNWSTRKPPAPRENTKGIKSGKTPGFEEIYNNTGPTNTT 207
Query: 135 VFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
V+ G P ++D + F F + D RV D +G+ F+ F ++E A AI
Sbjct: 208 VYCGGFPPNTISDNLIKTHFGQFGSIHDVRVFKD------KGYAFIKFISKEAAARAIEG 261
Query: 194 LNGKWLGNRQIRCNWAAK 211
+ + ++C W +
Sbjct: 262 THNSEVQGHPVKCYWGKE 279
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 162/290 (55%), Gaps = 22/290 (7%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A+
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAAST 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL-HRHFHALC 277
E N+ +P N TTVY G V S DL H+HF +
Sbjct: 181 PSKXXXXX------------EVYNQSSPTN----TTVYCGGFPPNVISDDLMHKHF--VQ 222
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 223 FGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 272
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 34/196 (17%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVF 136
A AI +NG+ I + I+ NW+ Y S +T+ V+
Sbjct: 147 AEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKXXXXXEVYNQSSPTNTT----VY 202
Query: 137 VGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
G P V +D + F F D RV D +GF F+ F +E A AI +
Sbjct: 203 CGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFSFIKFVTKEAAAHAIEHTH 256
Query: 196 GKWLGNRQIRCNWAAK 211
+ ++C W +
Sbjct: 257 NSEVHGNLVKCFWGKE 272
>gi|357610697|gb|EHJ67099.1| TIA-1-related RNA binding protein [Danaus plexippus]
Length = 388
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/302 (37%), Positives = 170/302 (56%), Gaps = 14/302 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ VT L +F G ++GCK+I++ Y F+++ + SAA A
Sbjct: 3 DESHPKTLYVGNLDASVTEEFLCALFGQIGEVKGCKIIREPGNDPYAFLEFTNHASAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNRRVFLEKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ K T G
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGPN 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ + SK V + T E N+ +P N TTVY G +S V + +L + +
Sbjct: 183 EGAPSSKRVKQPTF-----DEVYNQSSPTN----TTVYCGGFTSNVITEELMQSTFSQ-F 232
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPL 338
G I+DVRV RDKG+ F+R++T AA AI+ + + G +KC WG + ST
Sbjct: 233 GQIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKENGGTENQSTTN 292
Query: 339 PP 340
PP
Sbjct: 293 PP 294
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 93/211 (44%), Gaps = 36/211 (17%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY------------ASSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPTKGPNEGAPSSKRVKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + V T+ + + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNVITEELMQSTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+ + ++C W + G E QS+
Sbjct: 262 EATHNTEISGHTVKCFWGKENG--GTENQST 290
>gi|345324102|ref|XP_001514793.2| PREDICTED: nucleolysin TIAR-like [Ornithorhynchus anatinus]
Length = 452
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 149/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 130 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 189
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 190 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 249
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q + +K + ++ N+ +P+N TVY G ++S +T
Sbjct: 250 TNWATRKPPAPKSTQENSTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 297
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 298 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 355
Query: 326 SK 327
+
Sbjct: 356 KE 357
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 172 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 231
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSGHF--------------NVFVGD 139
AIV + G+ + G+ I+ NWA S +E+++ V+ G
Sbjct: 232 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENSTKQLRFEDVVNQSSPKNCTVYCGG 291
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 292 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 345
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 346 EGHVVKCYWGKE 357
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 286 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 343
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 344 TIEGHVVKCYWGKES 358
>gi|2281006|dbj|BAA21559.1| T-cluster binding protein [Homo sapiens]
gi|119569770|gb|EAW49385.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_a [Homo sapiens]
Length = 265
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 153/250 (61%), Gaps = 16/250 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K Q + + +++P+ TVY G ++S +T
Sbjct: 131 TNWATRKPPAPKSTQENNTK------------QLRFEDVVNQSSPKNCTVYCGGIASGLT 178
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 179 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 236
Query: 326 SKPTPPGTSS 335
K +P T +
Sbjct: 237 -KESPDMTKN 245
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 227 EGHVVKCYWGKE 238
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 167 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 225 TIEGHVVKCYWGKES 239
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 166/294 (56%), Gaps = 15/294 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S R++YVGN+ V+ LL +FS G ++GCK+I++ Y FV++ + + AA A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+ + +
Sbjct: 123 SNCRIVRDPQTMKSKGYAFVSFVKKSEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S N + +E N+ +P N TVY G ++ +T + + F G
Sbjct: 183 RPRHSN------NSKPNYEEVYNQSSPTN----CTVYCGGFTNGITDDLITKTFSPF--G 230
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
TI+D+RV +DKG+ F++++T A AI+ + + G +KC WG + P +
Sbjct: 231 TIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNS 284
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 87/203 (42%), Gaps = 34/203 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTMKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YASSQREDTSGHFN 134
A AI +NG+ + + I+ NW+ Y + + +
Sbjct: 148 SEAEAAIAAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVYNQSSPTNCT 207
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+ G + +TD + FS F T D RV D +G+ F+ F +E A AI
Sbjct: 208 VYCGGFTNGITDDLITKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIEST 261
Query: 195 NGKWLGNRQIRCNWAAKGATSGD 217
+ + ++C W G +GD
Sbjct: 262 HNTEINGSIVKCFW---GKENGD 281
>gi|448111784|ref|XP_004201926.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
gi|359464915|emb|CCE88620.1| Piso0_001392 [Millerozyma farinosa CBS 7064]
Length = 422
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/351 (35%), Positives = 173/351 (49%), Gaps = 56/351 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
+YVG +H V+ +L+++FSS G ++ K + DK+ SY FV++ + SA LA+ TL
Sbjct: 74 LYVGGLHKSVSEDVLRDLFSSCGGVKSIKTLN-DKNRPGFSYAFVEFENTDSAELALRTL 132
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
NGR + IK+NWAY SS S FN+FVGDLSPEV D +L FS F + A
Sbjct: 133 NGRMVNNSVIKINWAYQSSAVSTASQQEPFFNIFVGDLSPEVDDESLHKAFSKFESLRQA 192
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA------------ 210
VMWD +T RSRG+GFVSF NQ DA+ A+ +NG+W+G R IRCNWA+
Sbjct: 193 HVMWDMQTSRSRGYGFVSFGNQVDAELALQTMNGEWIGGRAIRCNWASHKQFNNPKFRAG 252
Query: 211 --KGATSGDEKQSS-------------------DSKSVVELTNGISDGQE--------KS 241
+ G+ + S S++ G +G + +S
Sbjct: 253 NNRYPNHGNRQYRSFHANPMQPQLHNQPIMPGLQSQASTAYQPGAGNGNQSNIPIMSPQS 312
Query: 242 NEDAPENNPQYTT-VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTH 300
+ P + T VY+GN++ DL G I D + +KG FV Y +H
Sbjct: 313 FDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNF--GFIVDFKFHPEKGCAFVNYDSH 370
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP---PPPAPHLPG 348
AALAI + G+P+KC WG K PP P PP+ + PG
Sbjct: 371 ERAALAIVQLAGFTINGRPLKCGWG-KERPPINQFQGFPRGVAPPSIYPPG 420
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
+++VG++ P+V + L + FS L ++ ++S YGFV + ++ A LA+ T
Sbjct: 164 NIFVGDLSPEVDDESLHKAFSKFESLRQAHVMWDMQTSRSRGYGFVSFGNQVDAELALQT 223
Query: 105 LNGRHIFGQPIKVNWA 120
+NG I G+ I+ NWA
Sbjct: 224 MNGEWIGGRAIRCNWA 239
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 17/131 (12%)
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNP----------QYTTVYVGNLSSEVTSVDLHRHF 273
S +V E++ + K+N D E++P T +YVG L V S D+ R
Sbjct: 33 SNNVNEISELDAKNNSKNNGDQMESSPASAVDGGREISNTILYVGGLHKSV-SEDVLRDL 91
Query: 274 HALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ C G ++ ++ DK + FV + A LA++ N R++ IK +W +
Sbjct: 92 FSSC-GGVKSIKTLNDKNRPGFSYAFVEFENTDSAELALRTLNGRMVNNSVIKINWAYQS 150
Query: 329 TPPGTSSTPLP 339
+ T+S P
Sbjct: 151 SAVSTASQQEP 161
>gi|119569771|gb|EAW49386.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_b [Homo sapiens]
Length = 282
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 153/250 (61%), Gaps = 16/250 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K Q + + +++P+ TVY G ++S +T
Sbjct: 148 TNWATRKPPAPKSTQENNTK------------QLRFEDVVNQSSPKNCTVYCGGIASGLT 195
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 196 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 253
Query: 326 SKPTPPGTSS 335
K +P T +
Sbjct: 254 -KESPDMTKN 262
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV + +G+ FV F E A AI +NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRVFPE------KGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 244 EGHVVKCYWGKE 255
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 184 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 242 TIEGHVVKCYWGKES 256
>gi|344255843|gb|EGW11947.1| Nucleolysin TIAR [Cricetulus griseus]
Length = 353
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 148 TNWATRKPPAPKSTQETNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 195
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 196 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 253
Query: 326 SK 327
+
Sbjct: 254 KE 255
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 244 EGHVVKCYWGKE 255
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 184 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 242 TIEGHVVKCYWGKES 256
>gi|354500962|ref|XP_003512565.1| PREDICTED: nucleolysin TIAR [Cricetulus griseus]
Length = 336
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 131 TNWATRKPPAPKSTQETNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 178
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 179 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 236
Query: 326 SK 327
+
Sbjct: 237 KE 238
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 227 EGHVVKCYWGKE 238
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 167 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 225 TIEGHVVKCYWGKES 239
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 165/288 (57%), Gaps = 13/288 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ VT + +F G ++GCK+I++ Y F+++ +AA A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ + S +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ SK + T E N+ +P N TTVY G +S V + DL ++ + G
Sbjct: 183 GAPSSKRAKQPTF-----DEVYNQSSPTN----TTVYCGGFTSNVITEDLMQNTFSQ-FG 232
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I+DVRV RDKG+ F+R++T AA AI+ + + G +KC WG +
Sbjct: 233 QIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKE 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L++ F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY-----------ASSQR-----------EDTSGHF 133
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNT 207
Query: 134 NVFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
V+ G + V T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAIE 261
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV 228
+ + ++C W + G + QS+++ +
Sbjct: 262 ATHNTEISGHIVKCFWGKENG--GGDNQSTNNATAA 295
>gi|335775520|gb|AEH58599.1| nucleolysin TIAR-like protein, partial [Equus caballus]
Length = 242
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 149/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 6 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 65
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 66 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 125
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K Q + + +++P+ TVY G ++S +T
Sbjct: 126 TNWATRKPPAPKSTQENNTK------------QLRFEDVVNQSSPKNCTVYCGGIASGLT 173
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 174 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 231
Query: 326 SK 327
+
Sbjct: 232 KE 233
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 48 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 107
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 108 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 167
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 168 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 221
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 222 EGHVVKCYWGKE 233
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 162 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 219
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 220 TIEGHVVKCYWGKES 234
>gi|441599875|ref|XP_004087575.1| PREDICTED: nucleolysin TIAR isoform 2 [Nomascus leucogenys]
gi|441599878|ref|XP_003255076.2| PREDICTED: nucleolysin TIAR isoform 1 [Nomascus leucogenys]
gi|119569773|gb|EAW49388.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_d [Homo sapiens]
Length = 353
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 87
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 88 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 147
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 148 TNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 195
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 196 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 253
Query: 326 SK 327
+
Sbjct: 254 KE 255
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 70 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 129
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 130 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 189
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 190 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 243
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 244 EGHVVKCYWGKE 255
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 184 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 241
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 242 TIEGHVVKCYWGKES 256
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D + +++YVGN+ V LL +FS GP++GCK+I++ Y FV++ + +SA+ A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGNDPYAFVEFTNHQSASTA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
++ +N R + +KVNWA + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 63 LIAMNKRVFLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AI +NG+WLG+R IR NW+ + +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ + SK + E N+ +P N TTVY G +S +T + + F G
Sbjct: 183 KPNQSKKQITF-------DEVYNQTSPTN----TTVYCGGFASGLTDDLVTKTFSRF--G 229
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I+D+RV +DKG+ F+++ + A AI+ + + G +KC WG +
Sbjct: 230 AIQDIRVFKDKGYAFIKFVSKESATHAIENIHNTEINGHTVKCFWGKE 277
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 88/203 (43%), Gaps = 30/203 (14%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETDTLREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA--------------------YASSQREDTSGHFNV 135
A AI +NG+ + + I+ NW+ + + + + V
Sbjct: 148 AEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAEKPNQSKKQITFDEVYNQTSPTNTTV 207
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G + +TD + FS F D RV D +G+ F+ F ++E A AI +++
Sbjct: 208 YCGGFASGLTDDLVTKTFSRFGAIQDIRVFKD------KGYAFIKFVSKESATHAIENIH 261
Query: 196 GKWLGNRQIRCNWAAKGATSGDE 218
+ ++C W + G +
Sbjct: 262 NTEINGHTVKCFWGKENGGLGPD 284
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 50/214 (23%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L V + L A FS +++ + + + FV F N + A +A+ +
Sbjct: 10 LYVGNLDISVQEDLLCALFSQIGPVKGCKII---REPGNDPYAFVEFTNHQSASTALIAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + +++++ NWA +P N P+ T
Sbjct: 67 NKRVFLDKEMKVNWAT----------------------------------SPGNQPKTDT 92
Query: 255 -----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEA 303
++VG+LS E+ + L F G I + R+ RD KG+ FV + EA
Sbjct: 93 SNHHHIFVGDLSPEIETDTLREAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKKAEA 150
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
AIQ N + L + I+ +W ++ PP + P
Sbjct: 151 ENAIQAMNGQWLGSRSIRTNWSTRKPPPPRAEKP 184
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/297 (34%), Positives = 163/297 (54%), Gaps = 13/297 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ G ++ CK+I++ Y F++Y ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGNDPYAFIEYSTYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLDKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D T +S+G+ FVSF + +A++AI +NG+W+G+R IR NW+ + E
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAITAMNGQWIGSRSIRTNWSTRKLPPPRE 180
Query: 219 KQS------SDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-H 270
+G+ Q + E+ +++P TTVY G V S DL H
Sbjct: 181 PNKGGGQGGGMGGGPGGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMH 240
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 KHF--VQFGPIQDVRVFKDKGFAFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGKE 295
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 49/215 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------------------------YASSQ 125
A AI +NG+ I + I+ NW+ SQ
Sbjct: 147 AEAENAITAMNGQWIGSRSIRTNWSTRKLPPPREPNKGGGQGGGMGGGPGGNGSGVKGSQ 206
Query: 126 REDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
R +N V+ G P V +D + F F D RV D +GF
Sbjct: 207 RHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGF 260
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + Q++C W +
Sbjct: 261 AFIKFVTKEAAARAIEHTHNSEVHGNQVKCFWGKE 295
>gi|119569772|gb|EAW49387.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1,
isoform CRA_c [Homo sapiens]
Length = 336
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 150/242 (61%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 131 TNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 178
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 179 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 236
Query: 326 SK 327
+
Sbjct: 237 KE 238
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 227 EGHVVKCYWGKE 238
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 167 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 224
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 225 TIEGHVVKCYWGKES 239
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 12/296 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAAL 100
D S +++YVGN+ V+ LL +FS+ GP++ CK+I++ Y F++Y + ++A
Sbjct: 1 MDESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATT 60
Query: 101 AIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N R + IKVNWA + + + D S H ++FVGDLSPE+ TL F+ F
Sbjct: 61 ALTAMNKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGE 120
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+ R++ D T +S+G+ FVSF + +A++AI +N +W+ +R IR NW+ + E
Sbjct: 121 ISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNRQWIASRSIRTNWSTRKLPPPRE 180
Query: 219 -----KQSSDSKSVVELTNGISDGQEKSNEDA-PENNPQYTTVYVGNLSSEVTSVDL-HR 271
Q +G+ Q + E+ +++P TTVY G V S DL H+
Sbjct: 181 PSKGGGQGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHK 240
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
HF + G I+DVRV +DKGF F+++ T AA AI+ + + G +KC WG +
Sbjct: 241 HF--VQFGPIQDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 82/214 (38%), Gaps = 48/214 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S+ ++VG++ P++ L+E F+ G + C++++ + Y FV + +
Sbjct: 87 PKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKK 146
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------------YASSQR 126
A AI +N + I + I+ NW+ SQR
Sbjct: 147 AEAENAIQAMNRQWIASRSIRTNWSTRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
Query: 127 EDTSGHFN--------VFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+N V+ G P V +D + F F D RV D +GF
Sbjct: 207 HTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD------KGFS 260
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F+ F +E A AI + + ++C W +
Sbjct: 261 FIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE 294
>gi|118918389|ref|NP_001036895.2| TIA1 cytotoxic granule-associated RNA binding protein [Bombyx mori]
gi|111608113|gb|ABH10800.1| nucleolysin TIAR protein [Bombyx mori]
Length = 402
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 166/289 (57%), Gaps = 14/289 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P VT L +F G ++GCK+I++ Y F+++ +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ K G
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVN 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ + SK + T E N+ +P N TTVY G +S + + +L ++ +
Sbjct: 183 EGAPSSKRAKQPTF-----DEVYNQSSPTN----TTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I+D+RV RDKG+ F+R++T AA AI+ + + G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKE 281
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY------------ASSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + +T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAK-GATSGDEKQSSDSKSVVELTNG 233
+ + ++C W + G + ++DS S V +G
Sbjct: 262 EATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPDQSG 304
>gi|259648117|dbj|BAI40366.1| TIA-1 homologue [Bombyx mori]
Length = 402
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 166/289 (57%), Gaps = 14/289 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P VT L +F G ++GCK+I++ Y F+++ +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGQIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDE 218
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ K G
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVN 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ + SK + T E N+ +P N TTVY G +S + + +L ++ +
Sbjct: 183 EGAPSSKRAKQPT-----FDEVYNQSSPTN----TTVYCGGFTSNIITEELMQNTFSQ-F 232
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I+D+RV RDKG+ F+R++T AA AI+ + + G +KC WG +
Sbjct: 233 GQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGKE 281
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY------------ASSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + +T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAK-GATSGDEKQSSDSKSVVELTNG 233
+ + ++C W + G + ++DS S V +G
Sbjct: 262 EATHNTEISGHTVKCFWGKENGGAENQVRHTADSNSTVPDQSG 304
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 162/304 (53%), Gaps = 35/304 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAAL 100
D + +++YVGN+ P V+ +L+ E+F GP + CK+I Y FV++++ A
Sbjct: 21 DEAYPKTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHALA 80
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
A +N R I G+ I+VNWA S + DTS H ++FVGDL+PE T L FS S
Sbjct: 81 AHGAMNQRKILGKEIRVNWATRPSNKRDTSNHHHIFVGDLAPETTSDDLKTYFSRIGIVS 140
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAI-------NDLNGKWLGNRQIRCNWAAK-- 211
DARVM D +T +S+G+GFVSF N +DAQ + + L+G RQ+RCNWAA+
Sbjct: 141 DARVMRDLQTNKSKGYGFVSFVNYQDAQDIVEKKRIIPDALHG-----RQVRCNWAARKG 195
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
G T G Q + +VV + SN + TVY+G S +T +
Sbjct: 196 GQTGGRTFQKLEFANVVN---------QSSNTNC--------TVYLGGCMSGLTDQLMRE 238
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
F G I ++RV DKG+ F+R+ H +AA AI + L G +KCSWG + T
Sbjct: 239 TFAGF--GNILEIRVFPDKGYSFIRFDNHTDAAQAITNKHGSTLEGYTVKCSWGKEGTSL 296
Query: 332 GTSS 335
G S+
Sbjct: 297 GNSN 300
>gi|384498314|gb|EIE88805.1| hypothetical protein RO3G_13516 [Rhizopus delemar RA 99-880]
Length = 199
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 131/210 (62%), Gaps = 23/210 (10%)
Query: 63 LLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA 122
+L E+F++ GP+ G K+I +YGFV++FD R A AI +NGR IF I+ NWA
Sbjct: 1 MLHEIFATVGPVAGVKIIT-GAVNYGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANWAQP 59
Query: 123 SSQ-----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
SS +EDT+ HF++FVGDL+PE+T+ TL FSVF T S+A VMWD +G+SRGFG
Sbjct: 60 SSSVQQTIKEDTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSRGFG 119
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDEKQSSDSKSVVELTNGISD 236
FV+FR++ DA+ AI +NG+WLG+R +RCNWA KG T+ Q
Sbjct: 120 FVAFRDKADAEKAIATMNGEWLGSRPVRCNWATQKGQTAMPVPQP--------------- 164
Query: 237 GQEKSNEDAPENNPQY-TTVYVGNLSSEVT 265
GQ+ E + P Y T++YVGN+ V+
Sbjct: 165 GQQLPYEIVVQQTPAYVTSIYVGNIPPHVS 194
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 37/172 (21%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV F + A+ AI D+NG+ + N +IR NWA + SS + ++
Sbjct: 24 YGFVEFFDPRVAEQAIQDMNGRKIFNYEIRANWA---------QPSSSVQQTIK------ 68
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------ 289
E+ + ++VG+L+ E+T+ L + F GT+ + V D
Sbjct: 69 -----------EDTTHHFHIFVGDLAPEITNETLAQAFSVF--GTMSEAHVMWDPMSGKS 115
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP 341
+GFGFV + +A AI N L +P++C+W ++ G ++ P+P P
Sbjct: 116 RGFGFVAFRDKADAEKAIATMNGEWLGSRPVRCNWATQ---KGQTAMPVPQP 164
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D + ++VG++ P++TN L + FS G + ++ S +GFV + D+ A
Sbjct: 70 DTTHHFHIFVGDLAPEITNETLAQAFSVFGTMSEAHVMWDPMSGKSRGFGFVAFRDKADA 129
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ 125
AI T+NG + +P++ NWA Q
Sbjct: 130 EKAIATMNGEWLGSRPVRCNWATQKGQ 156
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 165/288 (57%), Gaps = 13/288 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ VT + +F G ++GCK+I++ Y F+++ +AA A
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGNDPYAFLEFTSHTAAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ + S +
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNE 182
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ SK + T E N+ +P N TTVY G +S V + DL ++ + G
Sbjct: 183 GAPSSKRAKQPT-----FDEVYNQSSPTN----TTVYCGGFTSNVITEDLMQNTFSQ-FG 232
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I+DVRV RDKG+ F+R++T AA AI+ + + G +KC WG +
Sbjct: 233 QIQDVRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHIVKCFWGKE 280
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 87/199 (43%), Gaps = 33/199 (16%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L++ F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYA-----------SSQR-----------EDTSGHF 133
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTFDEVYNQSSPTNT 207
Query: 134 NVFVGDLSPEV-TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
V+ G + V T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVF------RDKGYAFIRFTTKEAAAHAIE 261
Query: 193 DLNGKWLGNRQIRCNWAAK 211
+ + ++C W +
Sbjct: 262 ATHNTEISGHIVKCFWGKE 280
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 84/210 (40%), Gaps = 56/210 (26%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG---FGFVSFRNQEDAQSAI 191
++VG+L VT+ + F +++ R G + F+ F + A +A+
Sbjct: 10 LYVGNLDASVTEVFICTLFGQIGEVKGCKII------REPGNDPYAFLEFTSHTAAATAL 63
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+N + + +++++ NWA +P N P+
Sbjct: 64 AAMNKRVVLDKEMKVNWAT----------------------------------SPGNQPK 89
Query: 252 YTT-----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTH 300
T ++VG+LS E+ + L F G I + R+ RD KG+ FV +
Sbjct: 90 TDTSNHHHIFVGDLSPEIETHILRDAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPTP 330
+A AIQ N + L + I+ +W ++ P
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPP 177
>gi|327267754|ref|XP_003218664.1| PREDICTED: nucleolysin TIAR-like [Anolis carolinensis]
Length = 342
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/242 (42%), Positives = 146/242 (60%), Gaps = 15/242 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 11 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEIT 70
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 71 TEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 130
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q S +K + ++ N+ +P+N TVY G ++S +T
Sbjct: 131 TNWATRKPPAPKTTQESTTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 178
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I + R KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 179 DQLMRQTFSPF--GQILETRAFPGKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 236
Query: 326 SK 327
+
Sbjct: 237 KE 238
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 53 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 112
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSGHF--------------NVFVGD 139
AIV + G+ + G+ I+ NWA + +E T+ V+ G
Sbjct: 113 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKTTQESTTKQLRFEDVVNQSSPKNCTVYCGG 172
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + R +G+ FV F E A AI +NG +
Sbjct: 173 IASGLTDQLMRQTFSPFGQILETRAF------PGKGYSFVRFSTHESAAHAIVSVNGTTI 226
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 227 EGHVVKCYWGKE 238
>gi|10801574|dbj|BAB16700.1| TIA-1 like protein [Bombyx mori]
Length = 285
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/293 (36%), Positives = 168/293 (57%), Gaps = 22/293 (7%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
D S +++YVGN+ P VT L +F G ++GCK+I++ Y F+++ +AA A
Sbjct: 3 DESHPKTLYVGNLDPSVTEVFLCTLFGXIGDVKGCKIIREPGNDPYAFLEFTCHTAAATA 62
Query: 102 IVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + + +KVNWA + + + DTS H ++FVGDLSPE+ L F+ F
Sbjct: 63 LAAMNKRVVLDKEMKVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEI 122
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-----AKGAT 214
S+ R++ D +T +S+G+ FVSF + DA++AI +NG+WLG+R IR NW+ AKG
Sbjct: 123 SNCRIVRDPQTLKSKGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVN 182
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
G + SK + T E N+ +P N TTVY G +S + + +L ++
Sbjct: 183 EG----APSSKRAKQPT-----FDEVYNQSSPTN----TTVYCGGFTSNIITEELMQNTF 229
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ G I+D+RV RDKG+ F+R++T AA AI+ + + G +KC WG +
Sbjct: 230 SQ-FGQIQDIRVFRDKGYAFIRFTTKEAAAHAIEATHNTEISGHTVKCFWGER 281
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ +L+E F+ G + C++++ ++ Y FV + +
Sbjct: 88 PKTDTSNHHHIFVGDLSPEIETNILREAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 147
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYA------------SSQR-----------EDTSGH 132
A AI +NG+ + + I+ NW+ SS+R + + +
Sbjct: 148 ADAEAAIQAMNGQWLGSRSIRTNWSTRKPPAKGVNEGAPSSKRAKQPTFDEVYNQSSPTN 207
Query: 133 FNVFVGDLSPE-VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
V+ G + +T+ + FS F D RV R +G+ F+ F +E A AI
Sbjct: 208 TTVYCGGFTSNIITEELMQNTFSQFGQIQDIRVF------RDKGYAFIRFTTKEAAAHAI 261
Query: 192 NDLNGKWLGNRQIRCNWAAK 211
+ + ++C W +
Sbjct: 262 EATHNTEISGHTVKCFWGER 281
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 50/207 (24%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L P VT+ L F +++ + + + F+ F A +A+ +
Sbjct: 10 LYVGNLDPSVTEVFLCTLFGXIGDVKGCKII---REPGNDPYAFLEFTCHTAAATALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + + +++++ NWA +P N P+ T
Sbjct: 67 NKRVVLDKEMKVNWAT----------------------------------SPGNQPKTDT 92
Query: 255 -----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEA 303
++VG+LS E+ + L F G I + R+ RD KG+ FV + +A
Sbjct: 93 SNHHHIFVGDLSPEIETNILREAFAPF--GEISNCRIVRDPQTLKSKGYAFVSFVKKADA 150
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPTP 330
AIQ N + L + I+ +W ++ P
Sbjct: 151 EAAIQAMNGQWLGSRSIRTNWSTRKPP 177
>gi|353237193|emb|CCA69172.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Piriformospora indica DSM 11827]
Length = 415
Score = 179 bits (453), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 110/153 (71%), Gaps = 6/153 (3%)
Query: 63 LLQEVFSSTGPLEGCKLI-----KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKV 117
+L E+F+ GP++ K+I + +YGFV+Y D R+A A+ TLNGR IF I+V
Sbjct: 1 MLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETALQTLNGRKIFDTEIRV 60
Query: 118 NWAY-ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
NWAY ++ +EDT+ H++VFVGDLSPEVTD L FS F T SDARVMWD +G+SRG+
Sbjct: 61 NWAYQGTTNKEDTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGY 120
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
GF++FR++ DA+ AI +NG+WLG+R IR NWA
Sbjct: 121 GFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWA 153
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P TTVYVGNL S T DL F +G + ++R+Q D+GF FV+ +H AA AI
Sbjct: 241 PHNTTVYVGNLPSYATQSDLIPLFQ--TIGYVSEIRIQADRGFAFVKLESHEAAAAAIVQ 298
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTPL 338
++ G+PIKCSWG K G +STP+
Sbjct: 299 LQGHLVQGRPIKCSWG-KDRAAGDTSTPV 326
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 38/160 (23%)
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV + + A++A+ LNG+ + + +IR NWA +G T+
Sbjct: 30 YGFVEYMDMRAAETALQTLNGRKIFDTEIRVNWAYQGTTN-------------------- 69
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------ 289
E+ + V+VG+LS EVT L + F A GT+ D RV D
Sbjct: 70 ----------KEDTTNHYHVFVGDLSPEVTDDVLSKAFSAF--GTLSDARVMWDMNSGKS 117
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+G+GF+ + +A AI N L + I+ +W ++ T
Sbjct: 118 RGYGFLAFRDKTDAEQAIATMNGEWLGSRAIRVNWANQKT 157
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
D + V+VG++ P+VT+ +L + FS+ G L +++ S YGF+ + D+ A
Sbjct: 72 DTTNHYHVFVGDLSPEVTDDVLSKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDA 131
Query: 99 ALAIVTLNGRHIFGQPIKVNWA 120
AI T+NG + + I+VNWA
Sbjct: 132 EQAIATMNGEWLGSRAIRVNWA 153
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 13/94 (13%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG+L T + L F S+ R+ D RGF FV + E A +AI L
Sbjct: 246 VYVGNLPSYATQSDLIPLFQTIGYVSEIRIQAD------RGFAFVKLESHEAAAAAIVQL 299
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV 228
G + R I+C+W G ++ + D+ + V
Sbjct: 300 QGHLVQGRPIKCSW-------GKDRAAGDTSTPV 326
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VYVGN+ T + L +F + G + + I+ D+ + FV +AA AIV L G
Sbjct: 245 TVYVGNLPSYATQSDLIPLFQTIGYVSEIR-IQADRG-FAFVKLESHEAAAAAIVQLQGH 302
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDA 147
+ G+PIK +W ++ +G + V ++P T +
Sbjct: 303 LVQGRPIKCSWG-----KDRAAGDTSTPVASMTPTGTSS 336
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 162/295 (54%), Gaps = 27/295 (9%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALA 101
+ S R++YVGN+ V+ LL +FS G ++GCK+I++ Y FV++ + + AA A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGNDPYAFVEFTNHQCAATA 134
Query: 102 IVTLNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ +N R + +KVNWA + + + DTS H ++FVGDLSPE+ TL F+ F
Sbjct: 135 LAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEI 194
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S+ R++ D +T +S+G+ FVSF + +A++AIN +NG+WLG+R IR NW+ + +
Sbjct: 195 SNCRIVRDPQTLKSKGYAFVSFVKKSEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSE 254
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV-YVGNLSSEVTSVDLHRHFHALCV 278
+ S + + P Y V Y G ++ +T + + F
Sbjct: 255 RPRHSNN---------------------SKPNYEEVLYCGGFTNGITDELIKKTFSPF-- 291
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGT 333
GTI+D+RV +DKG+ F++++T A AI+ + + G +KC WG + P +
Sbjct: 292 GTIQDIRVFKDKGYAFIKFTTKEAATHAIESTHNTEINGSIVKCFWGKENGDPNS 346
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 24/193 (12%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ Y FV + +
Sbjct: 160 PKLDTSNHHHIFVGDLSPEIETQTLKEAFAPFGEISNCRIVRDPQTLKSKGYAFVSFVKK 219
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA--YASSQREDTSGHFN---------VFVGDLSPEV 144
A AI +NG+ + + I+ NW+ R + H N ++ G + +
Sbjct: 220 SEAEAAINAMNGQWLGSRSIRTNWSTRKPPPPRSERPRHSNNSKPNYEEVLYCGGFTNGI 279
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
TD + FS F T D RV D +G+ F+ F +E A AI + + +
Sbjct: 280 TDELIKKTFSPFGTIQDIRVFKD------KGYAFIKFTTKEAATHAIESTHNTEINGSIV 333
Query: 205 RCNWAAKGATSGD 217
+C W G +GD
Sbjct: 334 KCFW---GKENGD 343
>gi|341893520|gb|EGT49455.1| CBN-TIAR-2 protein [Caenorhabditis brenneri]
Length = 420
Score = 177 bits (449), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 165/289 (57%), Gaps = 15/289 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAIVT 104
R+++VGN+ P VT+ + +F+ G + K+I + Y F+++ D AA A+ +
Sbjct: 38 RTLFVGNLDPAVTDEFIATLFNQMGAVTKAKIIFDFQGLADPYAFIEFSDHNQAAQALQS 97
Query: 105 LNGRHIFGQPIKVNWAYA------SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
+NGR + + ++VNWA SS++ D S HF+VFVGDLS E+ L F F
Sbjct: 98 MNGRQLLDRELRVNWAVEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGE 157
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+A+++ D T +++G+GFVS+ +EDA+ AI +NG+WLG R IR NWA++ E
Sbjct: 158 VSEAKIIRDTTTNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEEGE 217
Query: 219 KQSSDSKSVVELTNGISDGQEKS-NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++ + E G EK+ +E + +P T+VYVG + S +T ++ R F
Sbjct: 218 RRGGGFERDRERGERFHGGFEKTYDEIFHQTSPDNTSVYVGQIGS-LTEDEIRRAFDRF- 275
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAI-QMGNARILCGKPIKCSWG 325
G I +VR+ + +G+ FV++ AA AI QM N I+ G+ ++CSWG
Sbjct: 276 -GAINEVRIFKLQGYAFVKFEQKEPAARAIVQMNNTEIM-GQMVRCSWG 322
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 91/219 (41%), Gaps = 43/219 (19%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G+ + D S V+VG++ ++ + L+E F G + K+I+ ++
Sbjct: 114 VEPNQPGDSSRKMDYSRHFHVFVGDLSSEIDSTKLKEAFLPFGEVSEAKIIRDTTTNKAK 173
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA------------------------- 120
YGFV Y R A AI +NG+ + + I+ NWA
Sbjct: 174 GYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWASRKPGEEGERRGGGFERDRERGERF 233
Query: 121 -------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS 173
Y + + + +V+VG + +T+ + F F ++ R+ +
Sbjct: 234 HGGFEKTYDEIFHQTSPDNTSVYVGQIG-SLTEDEIRRAFDRFGAINEVRIF------KL 286
Query: 174 RGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
+G+ FV F +E A AI +N + + +RC+W G
Sbjct: 287 QGYAFVKFEQKEPAARAIVQMNNTEIMGQMVRCSWGKSG 325
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 159/282 (56%), Gaps = 21/282 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R++YVGN+ P V+ L+ +F+ G + K+I + Y FV++ D A+ A+ T+N
Sbjct: 44 RTLYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFDGANDPYAFVEFLDHSQASQALQTMN 103
Query: 107 GRHIFGQPIKVNWAYASSQ---REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
R + + +KVNWA Q + DT+ HF+VFVGDLS EV + L F F SDA+
Sbjct: 104 KRLLLDREMKVNWAVEPGQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 163
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + ++ +
Sbjct: 164 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYN 223
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
KS E+ N S T+VYVGN+++ ++ ++ + F + G I +
Sbjct: 224 EKSFDEIYNQTSGDN--------------TSVYVGNIAN-LSEDEIRQAFASY--GRISE 266
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 267 VRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWG 308
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 98/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G P + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 118 VEP---GQQPSKVDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 174
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 175 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPTHYNEKSFDEIYNQT 234
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +++ + F+ + S+ R+ + +G+ FV F N++ A
Sbjct: 235 SGDNTSVYVGNIA-NLSEDEIRQAFASYGRISEVRIF------KMQGYAFVKFDNKDAAA 287
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 288 KAIVQMNNQEVGGQLVRCSWGKTGDT 313
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L P V++ + F+ + + +V++D G + + FV F + A A+ +
Sbjct: 46 LYVGNLDPSVSEDLIATLFNQIGSVTKTKVIFD---GANDPYAFVEFLDHSQASQALQTM 102
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + L +R+++ NWA + GQ+ S D ++
Sbjct: 103 NKRLLLDREMKVNWA------------------------VEPGQQPSKVDTT----RHFH 134
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI+
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 192
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTP 337
N + L + I+ +W ++ PG P
Sbjct: 193 QMNGQWLGRRTIRTNWATR--KPGDQEKP 219
>gi|325303220|tpg|DAA34696.1| TPA_inf: apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Amblyomma variegatum]
Length = 374
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 156/274 (56%), Gaps = 15/274 (5%)
Query: 72 GPLEGCKLIKK-DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA--SSQRED 128
G ++GCK+I + Y FV++ D +SAA A++ +N R FG+ +KVNWA + ++ + D
Sbjct: 2 GQVKGCKIIHEPGNDPYCFVEFSDHQSAASALLAMNKRLCFGKEMKVNWATSPGNTPKLD 61
Query: 129 TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
TS H ++FVGDLSPE+ L F+ F SD RV+ D +T +S+G+GFVSF + DA+
Sbjct: 62 TSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADAE 121
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD-SKSVVELTNGISDGQEKSNEDAPE 247
+AI +NG+WLG+R IR NWA + + + D + S LT E N+ +P
Sbjct: 122 NAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTF-----DEVYNQSSPT 176
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
N TVY G ++ ++ + + F + G I+++RV +DKG+ F++ T A AI
Sbjct: 177 N----CTVYCGGITQGLSEELMQKTFSSY--GAIQEIRVFKDKGYAFIKVGTKEAATHAI 230
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP 341
+ + G+ +KCSWG + T P P P
Sbjct: 231 VATHNSDVNGQTVKCSWGKEATDPNNQQQPQVSP 264
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 91/208 (43%), Gaps = 33/208 (15%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L++ F+ G + C++++ ++ YGFV + +
Sbjct: 58 PKLDTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKK 117
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------YASSQREDTSGH 132
A AI T+NG+ + + I+ NWA + + + +
Sbjct: 118 ADAENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTN 177
Query: 133 FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
V+ G ++ +++ + FS + + RV D +G+ F+ +E A AI
Sbjct: 178 CTVYCGGITQGLSEELMQKTFSSYGAIQEIRVFKD------KGYAFIKVGTKEAATHAIV 231
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ + + ++C+W + +++Q
Sbjct: 232 ATHNSDVNGQTVKCSWGKEATDPNNQQQ 259
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 161/284 (56%), Gaps = 25/284 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI-KKDKSSYGFVDYFDRRSAALAIVTLN 106
R++YVGN+ VT + +F+ G + K+I Y FV++ D A+ A+ T+N
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 107 GRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
R + + +KVNWA Q++ DT+ HF+VFVGDLS EV + L F F SDA+
Sbjct: 106 KRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 165
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS- 222
V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + GD+++ S
Sbjct: 166 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--KPGDQEKPSH 223
Query: 223 -DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ KS E+ N S T+VYVGN++S +T ++ + F + G I
Sbjct: 224 YNEKSYDEIYNQTSGDN--------------TSVYVGNIAS-LTEDEIRQGFASF--GRI 266
Query: 282 EDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 267 TEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 310
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 120 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 176
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 177 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 236
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ F ++ R+ + +G+ FV F N++ A
Sbjct: 237 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 289
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 290 KAIVQMNNQDVGGQLVRCSWGKTGDT 315
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L VT+ + F+ + + +V++D G + + FV F + A A+ +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQTM 104
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + L +R+++ NWA + GQ++S D ++
Sbjct: 105 NKRLLLDREMKVNWA------------------------VEPGQQQSKIDTT----RHFH 136
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI+
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 194
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTP 337
N + L + I+ +W ++ PG P
Sbjct: 195 QMNGQWLGRRTIRTNWATR--KPGDQEKP 221
>gi|426335862|ref|XP_004029425.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Gorilla gorilla gorilla]
Length = 353
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/292 (36%), Positives = 153/292 (52%), Gaps = 57/292 (19%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
+++YVGN+ VT AL+ ++FS GP + CK+I +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDE------------------------ 42
Query: 108 RHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACFSV 155
+KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+
Sbjct: 43 -------VKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAP 95
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 96 FGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPA 155
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 156 PKSTYESNTKQL--------SYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTFSP 203
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 204 F--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 253
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 87/208 (41%), Gaps = 63/208 (30%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D+
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDE-------------------------- 42
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
++ NWA T +K+ + S +VV + + + +
Sbjct: 43 ---------VKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 74
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 75 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 132
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 133 QMGGQWLGGRQIRTNWATR-KPPAPKST 159
>gi|268531322|ref|XP_002630787.1| Hypothetical protein CBG02484 [Caenorhabditis briggsae]
Length = 403
Score = 174 bits (442), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 158/282 (56%), Gaps = 21/282 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R++YVGN+ P V+ + +F+ G + K+I + Y FV++ D A+ A+ T+N
Sbjct: 42 RTLYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHDGANDPYAFVEFSDHGQASQALQTMN 101
Query: 107 GRHIFGQPIKVNWAYASSQ---REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
R + + +KVNWA Q + DT+ HF+VFVGDLS EV + L F F SDA+
Sbjct: 102 KRLLHDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAK 161
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + ++ + +
Sbjct: 162 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYN 221
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
KS E+ N S T+VYVGN+++ +T ++ + F G I +
Sbjct: 222 EKSYDEVYNQTSGDN--------------TSVYVGNIAN-LTEDEIRQAF--ASYGRISE 264
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 265 VRIFKMQGYAFVKFENKNAAAKAITEMNNQDVGGQMVRCSWG 306
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G P + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 116 VEP---GQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFIPFGDVSDAKVIRDTNTTKSK 172
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ ++N
Sbjct: 173 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSNYNEKSYDEVYNQT 232
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ + S+ R+ + +G+ FV F N+ A
Sbjct: 233 SGDNTSVYVGNIA-NLTEDEIRQAFASYGRISEVRIF------KMQGYAFVKFENKNAAA 285
Query: 189 SAINDLNGKWLGNRQIRCNWAAKG 212
AI ++N + +G + +RC+W G
Sbjct: 286 KAITEMNNQDVGGQMVRCSWGKTG 309
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 41/209 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L P V++ + F+ + + +V+ D G + + FV F + A A+ +
Sbjct: 44 LYVGNLDPSVSEDFIATLFNQIGSVTKTKVIHD---GANDPYAFVEFSDHGQASQALQTM 100
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + L +R+++ NWA + GQ+ S D ++
Sbjct: 101 NKRLLHDREMKVNWA------------------------VEPGQQPSKIDTT----RHFH 132
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F + G + D +V RD KG+GFV Y EA AI+
Sbjct: 133 VFVGDLSSEVDNQKLREAF--IPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 190
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTP 337
N + L + I+ +W ++ PG P
Sbjct: 191 QMNGQWLGRRTIRTNWATR--KPGDQEKP 217
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 174 bits (440), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/282 (35%), Positives = 157/282 (55%), Gaps = 21/282 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R++YVGN+ P V+ + +F+ G + K+I + Y FV++ D A+ A+ T+N
Sbjct: 42 RTLYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFDGANDPYAFVEFSDHAQASQALQTMN 101
Query: 107 GRHIFGQPIKVNWAYASSQ---REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
R + + +KVNWA Q + DT+ HF+VFVGDLS EV + L F F SDA+
Sbjct: 102 KRLLLDREMKVNWAVEPGQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAK 161
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + ++ +
Sbjct: 162 VIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYN 221
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
KS E+ N S T+VYVGN+++ ++ D+ + F G I +
Sbjct: 222 EKSYDEIYNQTSGDN--------------TSVYVGNIAN-LSEEDIRQAF--ASYGRISE 264
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 265 VRIFKMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWG 306
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G P + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 116 VEP---GQQPSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 172
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 173 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPVHYNEKSYDEIYNQT 232
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +++ + F+ + S+ R+ + +G+ FV F N++ A
Sbjct: 233 SGDNTSVYVGNIA-NLSEEDIRQAFASYGRISEVRIF------KMQGYAFVKFDNKDAAA 285
Query: 189 SAINDLNGKWLGNRQIRCNWAAKG 212
AI +N + +G + +RC+W G
Sbjct: 286 KAIVQMNNQEVGGQLVRCSWGKTG 309
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 41/210 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L P V++ + F+ + + +V++D G + + FV F + A A+ +
Sbjct: 44 LYVGNLDPTVSEDFVATLFNQIGSVTKTKVIFD---GANDPYAFVEFSDHAQASQALQTM 100
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + L +R+++ NWA + GQ+ S D ++
Sbjct: 101 NKRLLLDREMKVNWA------------------------VEPGQQPSKIDTT----RHFH 132
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI+
Sbjct: 133 VFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 190
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPL 338
N + L + I+ +W ++ PG P+
Sbjct: 191 QMNGQWLGRRTIRTNWATR--KPGDQEKPV 218
>gi|395841399|ref|XP_003793527.1| PREDICTED: LOW QUALITY PROTEIN: nucleolysin TIA-1 isoform p40,
partial [Otolemur garnettii]
Length = 480
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 173/340 (50%), Gaps = 62/340 (18%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAAL--AI 102
+++YVGN+ VT AL+ ++FS GP + CK+I + + + D + R L
Sbjct: 43 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRPAGHMWPAEDIYLARQVFLLPPR 102
Query: 103 VTLNGRHIFG-----------QPIKVNWAYA-SSQREDTSG-----------HFNVFVGD 139
V L R + G +KVNWA SSQ++DTS HF+VFVGD
Sbjct: 103 VLLCSRLVLGPQSRPVVRPSNSEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGD 162
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
LSPE+T + A F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WL
Sbjct: 163 LSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL 222
Query: 200 GNRQIRCNWAAKGATS----------GDEKQ--------------SSDSKSVVELTNG-I 234
G RQIR NWA + + G+EK+ S + + E+ I
Sbjct: 223 GGRQIRTNWATRKPPAPKSTYECRCIGEEKEMWNFGEKYTRFKCXSCSRRLIAEIDEKQI 282
Query: 235 SDGQEKSN-------EDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
+KSN E +++P TVY G ++S +T + + F G I ++RV
Sbjct: 283 KTTVQKSNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQLMRQTFSPF--GQIMEIRVF 340
Query: 288 RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 341 PDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 380
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG----------RSRGFGFVSFRNQ 184
++VG+LS +VT+A + FS C + +++ D + +R + R
Sbjct: 45 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRPAGHMWPAEDIYLARQVFLLPPRVL 104
Query: 185 EDAQSAINDLNGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSN 242
++ + + + N +++ NWA T +K+ + S +VV
Sbjct: 105 LCSRLVLGPQSRPVVRPSNSEVKVNWAT---TPSSQKKDTSSSTVV-------------- 147
Query: 243 EDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVR 296
+ + + + V+VG+LS E+T+ D+ F G I D RV +D KG+GFV
Sbjct: 148 --STQRSQDHFHVFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVS 203
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
+ +A AIQ + L G+ I+ +W ++ PP ST
Sbjct: 204 FFNKWDAENAIQQMGGQWLGGRQIRTNWATR-KPPAPKST 242
>gi|50408254|ref|XP_456766.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
gi|49652430|emb|CAG84729.1| DEHA2A10010p [Debaryomyces hansenii CBS767]
Length = 463
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/360 (31%), Positives = 168/360 (46%), Gaps = 66/360 (18%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
+ +YVG +H V++ +L+++F+ G ++ K++ DK+ +Y F+++ + +SA +A+
Sbjct: 98 KILYVGGLHKSVSDEMLKDLFAVAGAIQSVKILN-DKNRPGFNYAFIEFENTQSADMALH 156
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFSVFPTCS 160
TLNGR I IK+NWAY SS + FN+FVGDLSPEV D TL FS FP+
Sbjct: 157 TLNGRIINNSEIKINWAYQSSTISSLNPDEPTFNIFVGDLSPEVDDETLNKSFSKFPSLK 216
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A VMWD +T RSRG+GFVSF Q DA+ A+ +NG+W+ R IRCNWA+ + +
Sbjct: 217 QAHVMWDMQTSRSRGYGFVSFGQQADAELALQTMNGEWISGRAIRCNWASHKQLNNNNNY 276
Query: 221 SSDSKSVVE------LTNGISDGQEKSNEDAPENNPQYTTVYVGNL-------------- 260
++++ N I + N P N Q+ GN+
Sbjct: 277 RNNNRHHQNNRQFRPFNNAIPQQLQNQNNGMPIGNGQFNPNQQGNMPPSQQQLHNVPQAN 336
Query: 261 ----------------SSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGF----- 294
S ++ + +G I Q D + FGF
Sbjct: 337 NSNNGNQANIPVMSPQSYDIVLRQTPSWQTTVYLGNIAHFTQQTDLIPLLQNFGFIVDFK 396
Query: 295 ---------VRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST---PLPPPP 342
V+Y +H AALAI + G+P+KC WG P G +PPPP
Sbjct: 397 FHPERGCAFVKYDSHERAALAIVQLAGFTINGRPLKCGWGKDRPPMGQFQNFGRGVPPPP 456
>gi|355724191|gb|AES08143.1| TIA1 cytotoxic granule-associated RNA binding protein-like 1
[Mustela putorius furo]
Length = 183
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/180 (47%), Positives = 123/180 (68%), Gaps = 3/180 (1%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGR 108
YVGN+ VT L+ ++FS GP + CK+I + S+ Y FV++++ R AA A+ +NGR
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDPYCFVEFYEHRDAAAALAAMNGR 60
Query: 109 HIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWD 167
I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D
Sbjct: 61 KILGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKD 120
Query: 168 QKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSV 227
TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K +
Sbjct: 121 MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL 180
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 41/207 (19%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+ + FS C +++ + + + FV F DA +A+ +N
Sbjct: 1 YVGNLSRDVTEVLILQLFSQIGPCKSCKMITEHTSNDP--YCFVEFYEHRDAAAALAAMN 58
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G+ + ++++ NWA S +K +S+ + V
Sbjct: 59 GRKILGKEVKVNWAT--TPSSQKKDTSN----------------------------HFHV 88
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AI
Sbjct: 89 FVGDLSPEITTEDIKSAFAPF--GKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVH 146
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 147 MGGQWLGGRQIRTNWATRK-PPAPKST 172
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 81 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 140
Query: 99 ALAIVTLNGRHIFGQPIKVNWA 120
AIV + G+ + G+ I+ NWA
Sbjct: 141 ENAIVHMGGQWLGGRQIRTNWA 162
>gi|443895242|dbj|GAC72588.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 394
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/322 (34%), Positives = 155/322 (48%), Gaps = 64/322 (19%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLN 106
V+V N+ T L+++F+S GP++ K++ S+ YGFV++ D SA A+ TL+
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASRNSAGLAYGFVEFVDVSSAERAVRTLD 88
Query: 107 GRHIFGQPIKVNWAYASSQRE--------------DTSGHFNVFVGDLSPEVTDATLFAC 152
G FG PIKV WA S E +G+ ++FVGDLSP+V D+ L++
Sbjct: 89 GWLCFGIPIKVCWAKQSMHPEAMTVTEPDRSAPTHSNAGNAHLFVGDLSPDVDDSMLYSS 148
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK- 211
FS P+ D RVM+D +TG+SRGFGFVSFR++ DA++ I + G+WLG RQIR NWA +
Sbjct: 149 FSRLPSLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCIAAMQGQWLGGRQIRVNWANQK 208
Query: 212 -----------------------GATSGDEKQSSDSKSVVELTNGISD-----GQEKSNE 243
GA S + S S ++D +
Sbjct: 209 NSQLSIMSATAENPSSTPPPQYPGAYSQLDPFDSTVTSTASFFPPVADLGLPGLPRRHTT 268
Query: 244 DAPENNPQYT------------------TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVR 285
P P T +VYVGNLS T+ DL R F G + R
Sbjct: 269 TGPTKFPSGTGAKLHFDQVLSEAPASVSSVYVGNLSPLTTAADLVRVFAPFNRGHSVEAR 328
Query: 286 VQRDKGFGFVRYSTHPEAALAI 307
+ +G+GFV +TH AA AI
Sbjct: 329 IPPARGYGFVTLATHEYAASAI 350
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 28/200 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V V +L T+ L F+ +V+ + + +GFV F + A+ A+ L
Sbjct: 29 VHVANLPSTTTERALRDMFASLGPIQSVKVVASRNSA-GLAYGFVEFVDVSSAERAVRTL 87
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAP-ENNPQYT 253
+G I+ WA KQS +++ + + AP +N
Sbjct: 88 DGWLCFGIPIKVCWA---------KQSMHPEAMT---------VTEPDRSAPTHSNAGNA 129
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
++VG+LS +V L+ F L ++ DVRV D +GFGFV + + +A I
Sbjct: 130 HLFVGDLSPDVDDSMLYSSFSRLP--SLVDVRVMYDAETGKSRGFGFVSFRSKRDAETCI 187
Query: 308 QMGNARILCGKPIKCSWGSK 327
+ L G+ I+ +W ++
Sbjct: 188 AAMQGQWLGGRQIRVNWANQ 207
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+V+VG+LSP T A L F+ F + + +RG+GFV+ E A SAI+
Sbjct: 297 SVYVGNLSPLTTAADLVRVFAPFNRGHSV----EARIPPARGYGFVTLATHEYAASAIST 352
Query: 194 LN--GKWLGNRQIRCNW 208
L+ G +L +R +R W
Sbjct: 353 LSNQGVFLHSRWLRLGW 369
>gi|268533576|ref|XP_002631916.1| Hypothetical protein CBG07904 [Caenorhabditis briggsae]
Length = 411
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 159/285 (55%), Gaps = 15/285 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIVTLN 106
R+++VGN+ P +T+ L +F+ G + K+ + F+++ D A A+ +N
Sbjct: 37 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAMN 96
Query: 107 GRHIFGQPIKVNWAYASSQ-----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
GR + + ++VNWA +SQ +++TS HF+VFVGDLS EV L F F S+
Sbjct: 97 GRSLLDREMRVNWAVDASQPGDSRKQETSRHFHVFVGDLSSEVDSTKLREAFLAFGDVSE 156
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
A+++ D T +++G+GFVS+ +EDA+ AI +NG+WLG R IR NWA + +
Sbjct: 157 AKIIRDTATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGGGER 216
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
D E + E N+ + +N T+VYVG + +++T ++ R F G I
Sbjct: 217 RDRGERGERRHYEKTFDEIYNQTSADN----TSVYVGQI-NQLTEDEIRRAFDRF--GPI 269
Query: 282 EDVRVQRDKGFGFVRYSTHPEAALAI-QMGNARILCGKPIKCSWG 325
+VR+ + +G+ FV++ AA AI QM NA I G+ ++CSWG
Sbjct: 270 NEVRMFKVQGYAFVKFEQKEAAARAIVQMNNAEIQ-GQQVRCSWG 313
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG+L P +TD L F+ + A+V +D G + F F+ F + A A+ +
Sbjct: 39 LFVGNLDPAITDEFLATLFNQIGAVTKAKVCFD---GMNDPFAFIEFGDHNQAGQALQAM 95
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ L +R++R NWA + GD ++ S+ +
Sbjct: 96 NGRSLLDREMRVNWAVDASQPGDSRKQETSR--------------------------HFH 129
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV S L F L G + + ++ RD KG+GFV Y +A AI+
Sbjct: 130 VFVGDLSSEVDSTKLREAF--LAFGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIE 187
Query: 309 MGNARILCGKPIKCSWGSK 327
N + L + I+ +W ++
Sbjct: 188 QMNGQWLGRRTIRTNWATR 206
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 46/201 (22%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTL 105
V+VG++ +V + L+E F + G + K+I+ ++ YGFV Y R A AI +
Sbjct: 130 VFVGDLSSEVDSTKLREAFLAFGDVSEAKIIRDTATNKAKGYGFVSYPRREDAERAIEQM 189
Query: 106 NGRHIFGQPIKVNWA-------------------------------YASSQREDTSGHFN 134
NG+ + + I+ NWA Y + ++TS
Sbjct: 190 NGQWLGRRTIRTNWATRKPEEEGGGERRDRGERGERRHYEKTFDEIYNQTSADNTS---- 245
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG ++ ++T+ + F F ++ R+ + +G+ FV F +E A AI +
Sbjct: 246 VYVGQIN-QLTEDEIRRAFDRFGPINEVRMF------KVQGYAFVKFEQKEAAARAIVQM 298
Query: 195 NGKWLGNRQIRCNWAAKGATS 215
N + +Q+RC+W G +S
Sbjct: 299 NNAEIQGQQVRCSWGKSGESS 319
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD---KGFGFVRYSTHPEAALAIQMG 310
T++VGNL +T L F+ +G + +V D F F+ + H +A A+Q
Sbjct: 38 TLFVGNLDPAITDEFLATLFNQ--IGAVTKAKVCFDGMNDPFAFIEFGDHNQAGQALQAM 95
Query: 311 NARILCGKPIKCSWGSKPTPPGTS 334
N R L + ++ +W + PG S
Sbjct: 96 NGRSLLDREMRVNWAVDASQPGDS 119
>gi|262401121|gb|ACY66463.1| TIA-1-like protein [Scylla paramamosain]
Length = 325
Score = 168 bits (425), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 158/293 (53%), Gaps = 21/293 (7%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLNGRH 109
YVGN+ VT L+ +F G + CK+ ++ + Y FV++ D +A AI +N +
Sbjct: 1 YVGNLDNSVTEDLIMMLFGQLGEVRSCKMFREPTTDPYCFVEFCDHMTALNAITMMNDKM 60
Query: 110 IFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+ + ++V+WA + DTS H +V+VGDLSPE+ + L F VF SD +V
Sbjct: 61 LQNRKMRVDWATGQGNKNKYTKVDTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKV 120
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D ++ +SRG+GFV F + DA+++I+ +NG+WLG + I+ WA + + + +
Sbjct: 121 VKDPQSFKSRGYGFVVFVKKMDAETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQ 180
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K + + E N+ P N TTV+ G L ++T LH+ F G IE +
Sbjct: 181 KKL--------NYDEVFNQTTPTN----TTVFCGGLKQDITEEMLHKSFQPH--GQIEKI 226
Query: 285 RVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
++ ++KG+ F++Y++ A AI + L G+ I+CSWG K T +S P
Sbjct: 227 KIFKEKGYAFIKYTSKESACQAIVELHNSNLNGQMIRCSWG-KDTGVDQTSNP 278
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 29/192 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
+ D S VYVG++ P++ L+E F G + CK++K +S YGFV + +
Sbjct: 82 KVDTSRHHHVYVGDLSPEIDEQALREAFQVFGEISDCKVVKDPQSFKSRGYGFVVFVKKM 141
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA-------------------YASSQREDTSGHFNVFV 137
A +I +NG+ + + IK WA Y + T + VF
Sbjct: 142 DAETSISAMNGQWLGRKMIKTRWATRKPANTPNETKPEQKKLNYDEVFNQTTPTNTTVFC 201
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
G L ++T+ L F ++ + +G+ F+ + ++E A AI +L+
Sbjct: 202 GGLKQDITEEMLHKSFQPHGQIEKIKIF------KEKGYAFIKYTSKESACQAIVELHNS 255
Query: 198 WLGNRQIRCNWA 209
L + IRC+W
Sbjct: 256 NLNGQMIRCSWG 267
>gi|225713880|gb|ACO12786.1| Nucleolysin TIAR [Lepeophtheirus salmonis]
Length = 352
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 164/294 (55%), Gaps = 27/294 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R++YVGN+ VT L+ +F G ++GCK+I++ S Y FV++ SAA A+ +N
Sbjct: 11 RTLYVGNLDVAVTEDLVLALFGQLGAVKGCKIIREGASDPYCFVEFAHPASAAAALTAMN 70
Query: 107 GRHIFGQPIKVNWA-----------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
R G+ +KVNWA + + + DTS H ++FVGDLSP++T TL F
Sbjct: 71 KRICLGKEMKVNWASSPGGSSDSVVHHNLPKPDTSQHHHIFVGDLSPDITTETLKNVFVP 130
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
F SD +V+ D T +S+G+GFVSF + DAQ+AI +NG+WLG+R IR NWAA+ +
Sbjct: 131 FGEISDYKVVKDMLTNKSKGYGFVSFVEKNDAQTAIEQMNGQWLGSRAIRTNWAARKPPA 190
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
S D+ +V +L + ++ + +P N TVY G L + ++ + + F
Sbjct: 191 ---PYSKDTSNVNKL-----NFEDVYRQASPRN----FTVYCGGLINSDENI-IRQTFSP 237
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G I ++R RDKG+ FVR+ A AI + + G+ +KCSWG + T
Sbjct: 238 F--GRILEIRYFRDKGYAFVRFDNKESACNAIVALHGSNVQGQSVKCSWGKEST 289
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G + N ++++ FS G + + + DK Y FV + ++ SA AIV L+G
Sbjct: 217 TVYCGGLINSDEN-IIRQTFSPFGRILEIRYFR-DKG-YAFVRFDNKESACNAIVALHGS 273
Query: 109 HIFGQPIKVNWAYASSQ 125
++ GQ +K +W S++
Sbjct: 274 NVQGQSVKCSWGKESTE 290
>gi|388851777|emb|CCF54583.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Ustilago hordei]
Length = 403
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/340 (33%), Positives = 160/340 (47%), Gaps = 84/340 (24%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLN 106
V+V N+ T L E+F S G ++ K++ YGFV+Y D SA AI T++
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVGGLVYGFVEYVDAASAERAIRTMD 67
Query: 107 GRHIFGQPIKVNWAYASSQRE-----------------------DTSGHFNVFVGDLSPE 143
G FG PIKV WA S + +GH ++FVGDLSPE
Sbjct: 68 GWLWFGTPIKVTWAKHSMHPDAATSPAAMGEVDPAERGGQVAMHSNAGHSHLFVGDLSPE 127
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V DA+L A FS P+ +D RVM+D +TG+SRGFGF++FR++ DA++ I + G+WLG RQ
Sbjct: 128 VDDASLHALFSRVPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCITTMQGQWLGGRQ 187
Query: 204 IRCNWA-----------AKGATSGDEKQSSDSKS----------------VVELTNGISD 236
IR NWA A SGD + S+S +N I+D
Sbjct: 188 IRVNWANQKNQNQPPLTAITTISGDYPTAYPSQSQQRPAPFSTKLVLSSYTSTPSNSITD 247
Query: 237 -------------GQEKSNEDAPEN----------------NPQYTTVYVGNLSSEVTSV 267
G + S + P N +P T+VYVGNLS +
Sbjct: 248 RPRFPGLPRRHTAGFDSSTQ--PTNPSLTHKTYSQVLSSAPSPDLTSVYVGNLSPLTSRQ 305
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
DL R F G + R+ +G+GF++ ++H +AA AI
Sbjct: 306 DLLRMFAPFNHGQPLEARIPSGRGYGFIKLTSHEQAASAI 345
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 19/200 (9%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V V +L T+ L F A+V+ + G +GFV + + A+ AI +
Sbjct: 8 VHVANLPATTTERDLCEMFGSLGQIQSAKVVTSRPVG-GLVYGFVEYVDAASAERAIRTM 66
Query: 195 NG-KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+G W G I+ WA K + D S + V D E+ + A +N ++
Sbjct: 67 DGWLWFGT-PIKVTWA-KHSMHPDAATSPAAMGEV-------DPAERGGQVAMHSNAGHS 117
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
++VG+LS EV LH F V ++ DVRV D +GFGF+ + + +A I
Sbjct: 118 HLFVGDLSPEVDDASLHALFSR--VPSLADVRVMYDAETGKSRGFGFINFRSRNDAETCI 175
Query: 308 QMGNARILCGKPIKCSWGSK 327
+ L G+ I+ +W ++
Sbjct: 176 TTMQGQWLGGRQIRVNWANQ 195
>gi|440297981|gb|ELP90622.1| nucleolysin TIA-1, putative [Entamoeba invadens IP1]
Length = 305
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 152/287 (52%), Gaps = 30/287 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+SV+V +H V LL +FS G + CK++K DK+ YGF+++ D +A A
Sbjct: 39 KSVHVAGLHESVDETLLSRIFSIVGHVVSCKIMK-DKTGTHARYGFIEFIDHTTAEFAKE 97
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+NGR ++G+ +KVNW + S + D G F +FVG L EVT+ L+ F+ F SDAR
Sbjct: 98 NMNGRLVYGKELKVNWTHDS--QSDAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDAR 155
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ ++G+S+G+GFV+F +EDA++A+ +NG+ + R ++ NW ++
Sbjct: 156 VLRYSQSGKSQGYGFVTFIRKEDAETAMQMMNGEKIQGRTVKVNWG-----------TAT 204
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
K + G E S E + NN VYVG + E + + F G I D
Sbjct: 205 QKPTETVKRGFD---EISRETSNTNN----NVYVGGIPKETEESTMRKLFGDF--GEIID 255
Query: 284 VRVQR---DKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+++ R +K +GFVR+ +H A AI M N L G + C WG +
Sbjct: 256 LKIMRTDAEKAYGFVRFVSHDNATKAIMMLNGYQLNGGCLNCMWGKE 302
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 92/186 (49%), Gaps = 20/186 (10%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSA 98
DA ++VG +H +VTN +L + F+ G + ++++ +S YGFV + + A
Sbjct: 120 DAKGSFKLFVGGLHTEVTNEILYQNFAKFGRVSDARVLRYSQSGKSQGYGFVTFIRKEDA 179
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQ-------------REDTSGHFNVFVGDLSPEVT 145
A+ +NG I G+ +KVNW A+ + RE ++ + NV+VG + E
Sbjct: 180 ETAMQMMNGEKIQGRTVKVNWGTATQKPTETVKRGFDEISRETSNTNNNVYVGGIPKETE 239
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
++T+ F F D ++M +T + +GFV F + ++A AI LNG L +
Sbjct: 240 ESTMRKLFGDFGEIIDLKIM---RTDAEKAYGFVRFVSHDNATKAIMMLNGYQLNGGCLN 296
Query: 206 CNWAAK 211
C W +
Sbjct: 297 CMWGKE 302
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 87/203 (42%), Gaps = 42/203 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V V L V + L FS+ ++M D KTG +GF+ F + A+ A ++
Sbjct: 41 VHVAGLHESVDETLLSRIFSIVGHVVSCKIMKD-KTGTHARYGFIEFIDHTTAEFAKENM 99
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NW SD+K +L
Sbjct: 100 NGRLVYGKELKVNWT--------HDSQSDAKGSFKL------------------------ 127
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQR------DKGFGFVRYSTHPEAALAIQ 308
+VG L +EVT+ L+++F G + D RV R +G+GFV + +A A+Q
Sbjct: 128 -FVGGLHTEVTNEILYQNFAKF--GRVSDARVLRYSQSGKSQGYGFVTFIRKEDAETAMQ 184
Query: 309 MGNARILCGKPIKCSWGSKPTPP 331
M N + G+ +K +WG+ P
Sbjct: 185 MMNGEKIQGRTVKVNWGTATQKP 207
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD-KSSYGFVDYFDRRSAA 99
R ++T +VYVG I + + ++++F G + K+++ D + +YGFV + +A
Sbjct: 220 RETSNTNNNVYVGGIPKETEESTMRKLFGDFGEIIDLKIMRTDAEKAYGFVRFVSHDNAT 279
Query: 100 LAIVTLNGRHIFGQPIKVNWAYAS 123
AI+ LNG + G + W S
Sbjct: 280 KAIMMLNGYQLNGGCLNCMWGKES 303
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 162/291 (55%), Gaps = 17/291 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI----KKDKSSYGFVDYFDRRSAALAIV 103
R+++VGN+ P +T+ L +F+ G + K+I + + FV++ D A+ A+
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 104 TLNGRHIFGQPIKVNWAYASSQ-----REDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
++NGR + + ++VNWA +Q + +TS HF+VFVGDLS E+ L F F
Sbjct: 98 SMNGRQLLEREMRVNWAVEPNQPGDRNKPETSRHFHVFVGDLSAEIDSTKLREAFLPFGE 157
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
S+A+++ D T +++G+GFVS+ +EDA+ AI +NG+WLG R IR NWA +
Sbjct: 158 VSEAKIIRDNATNKAKGYGFVSYPRREDAERAIEQMNGQWLGRRTIRTNWATRKPEEEGG 217
Query: 219 KQSSDSKSVVELTNGISDGQ----EKS-NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
++ ++ +G+ EK+ +E E T+VYVGN++S +T ++ R F
Sbjct: 218 ERRERDRNERGDRPHRGEGRHHHFEKTYDEVFREAAADNTSVYVGNINS-LTEDEIRRGF 276
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
G I +VR+ + +G+ FV++ AA AI N + + G+ ++CSW
Sbjct: 277 ERF--GQIVEVRIFKSQGYAFVKFEQKESAARAIVQMNNQDVSGQMVRCSW 325
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 34/199 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG+L P +TD L F+ + A++++D G + F FV F + A A+ +
Sbjct: 40 LFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQSM 99
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ L R++R NWA + GD + S+ +
Sbjct: 100 NGRQLLEREMRVNWAVEPNQPGDRNKPETSR--------------------------HFH 133
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS+E+ S L F L G + + ++ RD KG+GFV Y +A AI+
Sbjct: 134 VFVGDLSAEIDSTKLREAF--LPFGEVSEAKIIRDNATNKAKGYGFVSYPRREDAERAIE 191
Query: 309 MGNARILCGKPIKCSWGSK 327
N + L + I+ +W ++
Sbjct: 192 QMNGQWLGRRTIRTNWATR 210
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGT----IEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
T++VGNL +T L F+ + T I D + F FV +S H +A+ A+Q
Sbjct: 39 TLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQS 98
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTP 337
N R L + ++ +W +P PG + P
Sbjct: 99 MNGRQLLEREMRVNWAVEPNQPGDRNKP 126
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 159/336 (47%), Gaps = 53/336 (15%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK---KDKSSYGFVDYFDRRSAALAIVT 104
+ +YVG + + L E FS++GP+ K++ K +Y FV++ D AA A+
Sbjct: 44 KVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNYAFVEFVDEAGAAAALQE 103
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCS 160
NG +K+N+AY SS T +N+FVGDLSPEV D +L FS F +
Sbjct: 104 FNGSSFENSMLKINYAYQSSTFNATQNSDDPTYNIFVGDLSPEVDDESLHKFFSAFESLK 163
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA------AKGAT 214
A VMWD +T RSRG+GFV+F N DA++A++ +NGK L R IRCNWA ++GA
Sbjct: 164 QAHVMWDMQTSRSRGYGFVTFANLADAETALSTMNGKVLNGRAIRCNWASHKQQNSRGAP 223
Query: 215 SGDEKQS----------SDSKSVVELTNGISDGQ-------EKSNEDAP----------- 246
+ ++ ++S + N D Q ++ + P
Sbjct: 224 RQNNQRQFRPQYQRPGFNESPVPMPEQNNFGDAQFSLPQRPQQEQQMMPNLAMGPNTGVM 283
Query: 247 ---------ENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
P + TTVY+GN++ DL G I D + +KG FV+
Sbjct: 284 SPHSFDIVLRQTPSWQTTVYLGNIAHFTQQNDLIPLLQNF--GYIVDFKFHPEKGCAFVK 341
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
Y TH AALAI + + G+ +KC WG P G
Sbjct: 342 YDTHERAALAIVQLSGFNVNGRQLKCGWGKSRPPMG 377
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 131/214 (61%), Gaps = 15/214 (7%)
Query: 115 IKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS 173
+KVNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F SDARV+ D TG+S
Sbjct: 209 VKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKS 268
Query: 174 RGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNG 233
+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + Q +++K +
Sbjct: 269 KGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQL------ 322
Query: 234 ISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFG 293
++ N+ +P+N TVY G ++S +T + + F G I ++RV +KG+
Sbjct: 323 --RFEDVVNQSSPKN----CTVYCGGIASGLTDQLMRQTFSPF--GQIMEIRVFPEKGYS 374
Query: 294 FVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
FVR+STH AA AI N + G +KC WG +
Sbjct: 375 FVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 408
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 29/192 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV ++++ A
Sbjct: 223 DTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDA 282
Query: 99 ALAIVTLNGRHIFGQPIKVNWAY------ASSQREDTS-------------GHFNVFVGD 139
AIV + G+ + G+ I+ NWA S+Q +T + V+ G
Sbjct: 283 ENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 342
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ +TD + FS F + RV +G+ FV F E A AI +NG +
Sbjct: 343 IASGLTDQLMRQTFSPFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTI 396
Query: 200 GNRQIRCNWAAK 211
++C W +
Sbjct: 397 EGHVVKCYWGKE 408
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 337 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEK--GYSFVRFSTHESAAHAIVSVNGT 394
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 395 TIEGHVVKCYWGKES 409
>gi|332226897|ref|XP_003262629.1| PREDICTED: nucleolysin TIA-1 isoform p40 [Nomascus leucogenys]
Length = 411
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 154/294 (52%), Gaps = 40/294 (13%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 44 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 103
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 104 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 163
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F S S F + DA++AI + G+WLG RQIR NWA +
Sbjct: 164 APFGRIS------------SNQFYMNAIIKFSDAENAIQQMGGQWLGGRQIRTNWATRKP 211
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ S++K + E N+ +P N TVY G ++S +T + + F
Sbjct: 212 PAPKSTYESNTKQL--------SYDEVVNQSSPSN----CTVYCGGVTSGLTEQLMRQTF 259
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I ++RV DKG+ FVR+++H AA AI N + G +KC WG +
Sbjct: 260 SPF--GQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 311
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 30/202 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 46 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 103
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 104 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 144
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
V+VG+LS E+T+ D+ F G I + + +++S +A AIQ +
Sbjct: 145 VFVGDLSPEITTEDIKAAFAPF--GRISSNQFYMN---AIIKFS---DAENAIQQMGGQW 196
Query: 315 LCGKPIKCSWGSKPTPPGTSST 336
L G+ I+ +W ++ PP ST
Sbjct: 197 LGGRQIRTNWATR-KPPAPKST 217
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG----FGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F +G ++ ++ D + FV + H AA A+
Sbjct: 45 TLYVGNLSRDVTEALILQLFSQ--IGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 102
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 103 MNGRKIMGKEVKVNWATTPS 122
>gi|190345927|gb|EDK37898.2| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 153/309 (49%), Gaps = 29/309 (9%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRH 109
+YVGNI V L E+F T ++ K +Y FV++ R A + NG
Sbjct: 80 LYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAFNGSE 139
Query: 110 IFGQPIKVNWAYASSQREDTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
+ G IK+NWAY SS +S + +FVGDLS EV D TL F FP+ A VM
Sbjct: 140 VGGSSIKINWAYQSSTISTSSSPESPLYTIFVGDLSAEVDDETLGKAFDQFPSRKQAHVM 199
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA------KGATSGDEK 219
WD +T RSRG+GFVSF + +A++A+ + G ++G R IRCNWA+ K T K
Sbjct: 200 WDMQTSRSRGYGFVSFADPAEAENALVTMPGSFIGGRAIRCNWASHRHMYQKKNTRPPPK 259
Query: 220 QSSDSKSV------------VELTNGISDGQ---EKSNEDAPENNPQY-TTVYVGNLSSE 263
+S+ + + ++ NG + Q KS E P + TTVY+GN++
Sbjct: 260 RSASAGATTPPSPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYLGNIAHF 319
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
S DL G I D + KG FV+Y +H AALAI + G+P+KC
Sbjct: 320 THSSDLIPLLQNF--GFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNGRPLKCG 377
Query: 324 WG-SKPTPP 331
WG +P P
Sbjct: 378 WGRDRPIAP 386
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 45/225 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG++ V + L +F +++ D K + FV F +EDA+S +
Sbjct: 80 LYVGNIPKTVNEQYLH---ELFDKTKSVKLLHD-KNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG +G I+ NWA Q + + T
Sbjct: 136 NGSEVGGSSIKINWAY---------------------------QSSTISTSSSPESPLYT 168
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS+EV L + F + D++ R +G+GFV ++ EA A+
Sbjct: 169 IFVGDLSAEVDDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTM 228
Query: 311 NARILCGKPIKCSWGS----------KPTPPGTSSTPLPPPPAPH 345
+ G+ I+C+W S +P P ++S PP+P+
Sbjct: 229 PGSFIGGRAIRCNWASHRHMYQKKNTRPPPKRSASAGATTPPSPY 273
>gi|146420743|ref|XP_001486325.1| hypothetical protein PGUG_01996 [Meyerozyma guilliermondii ATCC
6260]
Length = 397
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 151/309 (48%), Gaps = 29/309 (9%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRH 109
+YVGNI V L E+F T ++ K +Y FV++ R A + NG
Sbjct: 80 LYVGNIPKTVNEQYLHELFDKTKSVKLLHDKNKPGFNYAFVEFDTREDAESVLTAFNGSE 139
Query: 110 IFGQPIKVNWAYASSQREDTSG----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
+ G IK+NWAY S +S + +FVGDLS EV D TL F FP+ A VM
Sbjct: 140 VGGSSIKINWAYQLSTISTSSSPELPLYTIFVGDLSAEVDDETLGKAFDQFPSRKQAHVM 199
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA------KGATSGDEK 219
WD +T RSRG+GFVSF + +A++A+ + G ++G R IRCNWA+ K T K
Sbjct: 200 WDMQTSRSRGYGFVSFADPAEAENALVTMPGLFIGGRAIRCNWASHRHMYQKKNTRPPPK 259
Query: 220 QSSDSKSV------------VELTNGISDGQ---EKSNEDAPENNPQY-TTVYVGNLSSE 263
+S+ + + ++ NG + Q KS E P + TTVY+GN++
Sbjct: 260 RSASAGATTPPLPYTAQGYPIDTNNGGRNPQPQAPKSFEVVLRQAPNWQTTVYLGNIAHF 319
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
DL G I D + KG FV+Y +H AALAI + G+P+KC
Sbjct: 320 THLSDLIPLLQNF--GFIVDFKFHPSKGCAFVKYDSHERAALAIVQLAGYSVNGRPLKCG 377
Query: 324 WG-SKPTPP 331
WG +P P
Sbjct: 378 WGRDRPIAP 386
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 45/225 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG++ V + L +F +++ D K + FV F +EDA+S +
Sbjct: 80 LYVGNIPKTVNEQYLH---ELFDKTKSVKLLHD-KNKPGFNYAFVEFDTREDAESVLTAF 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG +G I+ NWA + +T S +PE P YT
Sbjct: 136 NGSEVGGSSIKINWAYQLSTI-------------------------STSSSPEL-PLYT- 168
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS+EV L + F + D++ R +G+GFV ++ EA A+
Sbjct: 169 IFVGDLSAEVDDETLGKAFDQFPSRKQAHVMWDMQTSRSRGYGFVSFADPAEAENALVTM 228
Query: 311 NARILCGKPIKCSWGS----------KPTPPGTSSTPLPPPPAPH 345
+ G+ I+C+W S +P P ++S PP P+
Sbjct: 229 PGLFIGGRAIRCNWASHRHMYQKKNTRPPPKRSASAGATTPPLPY 273
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 20/118 (16%)
Query: 228 VELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ 287
V + + ++ G+E SN T +YVGN+ V LH F + V++
Sbjct: 63 VAVASAVNGGREISN----------TVLYVGNIPKTVNEQYLHELFD-----KTKSVKLL 107
Query: 288 RDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPP 340
DK + FV + T +A + N + G IK +W + + TSS+P P
Sbjct: 108 HDKNKPGFNYAFVEFDTREDAESVLTAFNGSEVGGSSIKINWAYQLSTISTSSSPELP 165
>gi|50289655|ref|XP_447259.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526568|emb|CAG60192.1| unnamed protein product [Candida glabrata]
Length = 416
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 110/170 (64%), Gaps = 3/170 (1%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T LL++ F + GP++ K+I+ K+ +Y FV+Y A +A
Sbjct: 55 TSDRVLYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKNEYVNYAFVEYIRSHDANVA 114
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG + + +K+NWA+ + Q + FN+FVGDL+ +V D TL F FPT
Sbjct: 115 LQTLNGVQLENKTLKINWAFETQQAAENDDTFNLFVGDLNVDVDDETLAGTFREFPTFIQ 174
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
A VMWD +TGRSRG+GFVSF NQE+AQ A++ + GK L RQIR NWA K
Sbjct: 175 AHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAMQGKDLSGRQIRINWATK 224
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F + +++ D K + FV + DA A+ L
Sbjct: 60 LYVGNLDKSITEDLLKQYFQAGGPIQNVKIIEDMKN-EYVNYAFVEYIRSHDANVALQTL 118
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG L N+ ++ NWA + + A EN+ +
Sbjct: 119 NGVQLENKTLKINWAFE------------------------------TQQAAENDDTFN- 147
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ +V L F + + D++ R +G+GFV +S EA A+
Sbjct: 148 LFVGDLNVDVDDETLAGTFREFPTFIQAHVMWDMQTGRSRGYGFVSFSNQEEAQKAMDAM 207
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+ I+ +W +K
Sbjct: 208 QGKDLSGRQIRINWATK 224
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL G I D +KG F++Y TH +AA+ I
Sbjct: 312 PRVTTAYIGNIPHYATEADLIPLLQNF--GFILDFTHYPEKGCCFIKYDTHEQAAVCIVA 369
Query: 310 GNARILCGKPIKCSWGSKPT----PPGTSSTPLP-------PPPAPH 345
G+ ++ WG + T P G +P PPAP
Sbjct: 370 LANFPFQGRNLRTGWGKERTNFMPPQGAPGQQMPVMMDPSQAPPAPQ 416
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+++ D K V + G+E S+ +YVGNL +T L ++F A
Sbjct: 34 QENDDDKPSVVPASATKGGRETSDR----------VLYVGNLDKSITEDLLKQYFQA--G 81
Query: 279 GTIEDVRVQRDK-----GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
G I++V++ D + FV Y +A +A+Q N L K +K +W
Sbjct: 82 GPIQNVKIIEDMKNEYVNYAFVEYIRSHDANVALQTLNGVQLENKTLKINW 132
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 18/226 (7%)
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
+N R + + +KVNWA S + DTS HF+VF+GDLSPEV + L F+ F SDA
Sbjct: 1 MNKRVLLDREMKVNWATEPGSQAKVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDA 60
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + T D +QS
Sbjct: 61 KVIRDSTTLKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSK 120
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
S ++ N + P T+VY+GN++ V DL F G I
Sbjct: 121 PELSYDDVFN--------------QTGPDNTSVYIGNVNQSVNDEDLRAAFDKF--GRIV 164
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+VR+ + +GF FVR+ A AI N + G+ +KCSWG P
Sbjct: 165 EVRIFKTQGFAFVRFDKKDSACNAIVKMNGTEIGGQTVKCSWGRTP 210
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 27/190 (14%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
+ D S V++G++ P+V N L++ F+ G + K+I+ + YGFV Y R
Sbjct: 24 KVDTSKHFHVFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKRE 83
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVGD 139
A AI +NG+ + + I+ NWA Y + + +V++G+
Sbjct: 84 EAERAIEQMNGQWLGRRTIRTNWATRKPTGTDGQQSKPELSYDDVFNQTGPDNTSVYIGN 143
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
++ V D L A F F + R+ +++GF FV F ++ A +AI +NG +
Sbjct: 144 VNQSVNDEDLRAAFDKFGRIVEVRIF------KTQGFAFVRFDKKDSACNAIVKMNGTEI 197
Query: 200 GNRQIRCNWA 209
G + ++C+W
Sbjct: 198 GGQTVKCSWG 207
>gi|367016631|ref|XP_003682814.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
gi|359750477|emb|CCE93603.1| hypothetical protein TDEL_0G02360 [Torulaspora delbrueckii]
Length = 402
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 150/329 (45%), Gaps = 46/329 (13%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALA 101
++ + +YVGN+ + +L++ F GP+ K++ +S Y FV+YF A +A
Sbjct: 41 TSDKVLYVGNLDTSINEEILKQYFQVGGPIANVKIMVDKNNSNANYAFVEYFQSHDANIA 100
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ S Q FN+FVGDL+ +V D TL F FPT
Sbjct: 101 LQTLNGKQIENNVVKINWAFQSQQVSPDEATFNLFVGDLNVDVDDETLRNAFKEFPTYLQ 160
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK---------- 211
VMWD +TG SRG+GFVSF +QE+AQ A++ + G L R +R NWA+K
Sbjct: 161 GHVMWDMQTGGSRGYGFVSFGSQEEAQKAMDAMQGHELNGRPLRINWASKRENNNNNNRR 220
Query: 212 --------------GATSGDEKQSSDSKSVVELTNGI-----SDGQEKSNEDAPENNPQ- 251
G G + + L G+ + G P NPQ
Sbjct: 221 NVNGPRNNGFRHNNGGFPGSRGMPMPPPNSMSLPMGVVPPPQALGNPNGPSVPPPVNPQA 280
Query: 252 -----------YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTH 300
TT Y+GN+ DL G I D + +KG F++Y TH
Sbjct: 281 VDSMIRRAPPRVTTAYIGNIPHFAIEADLIPLLQNF--GFIIDFKHYPEKGCCFIKYDTH 338
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPT 329
+AA+ I G+ ++ WG + T
Sbjct: 339 EQAAVCIVALANFPFQGRNLRTGWGKERT 367
>gi|16198525|gb|AAH15944.1| TIA1 protein [Homo sapiens]
gi|119620232|gb|EAW99826.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
gi|119620233|gb|EAW99827.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_d [Homo sapiens]
Length = 214
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 14/178 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTL 105
+++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++ + R AA A+ +
Sbjct: 7 KTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 106 NGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDATLFACF 153
NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F
Sbjct: 67 NGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAF 126
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA +
Sbjct: 127 APFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATR 184
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 30/208 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 166 QMGGQWLGGRQIRTNWATR-KPPAPKST 192
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG----FGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F +G ++ ++ D + FV + H AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQ--IGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAA 65
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 66 MNGRKIMGKEVKVNWATTPS 85
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/322 (31%), Positives = 157/322 (48%), Gaps = 61/322 (18%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--------------------------- 80
R++YVGN+ VT + +F+ G + K+I
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDVSFSLWNKTNLYRKLLLARGIGVPG 105
Query: 81 --------------KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR 126
Y FV++ D A+ A+ T+N R + + +KVNWA Q+
Sbjct: 106 YKCTRRQPIHTDTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQ 165
Query: 127 E---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
+ DT+ HF+VFVGDLS EV + L F F SDA+V+ D T +S+G+GFVS+
Sbjct: 166 QSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPK 225
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+E+A+ AI +NG+WLG R IR NWA + ++ + KS E+ N S
Sbjct: 226 REEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN----- 280
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
T+VYVGN++S +T ++ + F + G I +VR+ + +G+ FV++ A
Sbjct: 281 ---------TSVYVGNIAS-LTEDEIRQGFASF--GRITEVRIFKMQGYAFVKFDNKDAA 328
Query: 304 ALAIQMGNARILCGKPIKCSWG 325
A AI N + + G+ ++CSWG
Sbjct: 329 AKAIVQMNNQDVGGQLVRCSWG 350
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 160 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 216
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 217 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 276
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ F ++ R+ + +G+ FV F N++ A
Sbjct: 277 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 329
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 330 KAIVQMNNQDVGGQLVRCSWGKTGDT 355
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 38/177 (21%)
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D +TG + + FV F + A A+ +N + L +R+++ NWA
Sbjct: 117 DTETGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWA----------------- 159
Query: 227 VVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
+ GQ++S D ++ V+VG+LSSEV + L F G + D +V
Sbjct: 160 -------VEPGQQQSKIDTT----RHFHVFVGDLSSEVDNQKLREAFQPF--GDVSDAKV 206
Query: 287 QRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
RD KG+GFV Y EA AI+ N + L + I+ +W ++ PG P
Sbjct: 207 IRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--KPGDQEKP 261
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 157/294 (53%), Gaps = 24/294 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-YGFVDYFDRRSAALAIVTLN 106
R+++V N+ P +T+ L +F+ G + K+I + + Y FV++ D A LA+ + N
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 107 GRHIFGQPIKVNWAYASSQ------REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
GR + + + V WA+ + + +TS HF+VFVGDL E+ L F F S
Sbjct: 100 GRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVS 159
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+A+++ D T + +G+GFVS+ +EDA+ AI+++NG WLG R IR NWA + E+
Sbjct: 160 EAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERG 219
Query: 221 SSDSKSVVELTNGISDGQEKS--------NEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
G +S N+ A +N T+VYVGN+++ + ++ R
Sbjct: 220 GDRGDRRGGGGGGRDRYHNQSEKTYDEIFNQAAADN----TSVYVGNIAN-LGEDEIRRA 274
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI-QMGNARILCGKPIKCSWG 325
F G I +VR + +G+ FV++ T AA AI QM NA I G+ ++CSWG
Sbjct: 275 FDRF--GPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADI-GGQIVRCSWG 325
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 46/222 (20%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
EP G + + S V+VG++ ++ + L+E F G + K+I+ + ++
Sbjct: 114 FEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGK 173
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA------------------------- 120
YGFV Y R A AI +NG + + I+ NWA
Sbjct: 174 GYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGGDRGDRRGGGGGGR 233
Query: 121 --YASSQREDTSGHFN--------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKT 170
Y + + FN V+VG+++ + + + F F ++ R T
Sbjct: 234 DRYHNQSEKTYDEIFNQAAADNTSVYVGNIA-NLGEDEIRRAFDRFGPINEVR------T 286
Query: 171 GRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
+ +G+ FV F +E A AI +N +G + +RC+W G
Sbjct: 287 FKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSG 328
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK---KDKSSYGFVDYFDRRSAALAIVT 104
+ +YVG +H VT+ +L+++FS G ++ K++ K +Y F+++ ++A +A+ T
Sbjct: 79 KILYVGGLHKSVTDDMLKDLFSVAGGIKSVKILNDKNKPGFNYAFIEFDTNQAADMALHT 138
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFACFSVFPTC 159
LNGR I IK+NWA+ SS +T+ H FN+FVGDLSPEV D TL FS F T
Sbjct: 139 LNGRIINNSEIKINWAFQSSTI-NTAAHPDEPTFNIFVGDLSPEVDDETLTRAFSKFQTL 197
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F Q DA+ A+ +NG+W+ R IRCNWA+
Sbjct: 198 KQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTMNGEWINGRAIRCNWAS 248
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L VTD L FSV +++ D K + F+ F + A A++ L
Sbjct: 81 LYVGGLHKSVTDDMLKDLFSVAGGIKSVKILND-KNKPGFNYAFIEFDTNQAADMALHTL 139
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + N +I+ NWA + +T N A + P +
Sbjct: 140 NGRIINNSEIKINWAFQSSTI--------------------------NTAAHPDEPTFN- 172
Query: 255 VYVGNLSSEVTSVDLHRHFHALCV----GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS EV L R F + D++ R +G+GFV + T +A LA+Q
Sbjct: 173 IFVGDLSPEVDDETLTRAFSKFQTLKQAHVMWDMQTSRSRGYGFVTFGTQADAELALQTM 232
Query: 311 NARILCGKPIKCSWGS 326
N + G+ I+C+W S
Sbjct: 233 NGEWINGRAIRCNWAS 248
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ +L G I D + ++G FV+Y +H AALAI
Sbjct: 356 TTVYLGNIAHFTQQNELIPLLQNF--GFIVDFKFHPERGCAFVKYDSHERAALAIVQLAG 413
Query: 313 RILCGKPIKCSWGSKPTPPG---TSSTPLPPPP 342
+ G+P+KC WG P G +PPPP
Sbjct: 414 FTVNGRPLKCGWGKDRPPMGQFQNFGRGVPPPP 446
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQM 309
+YVG L VT L F G I+ V++ DK + F+ + T+ A +A+
Sbjct: 81 LYVGGLHKSVTDDMLKDLFS--VAGGIKSVKILNDKNKPGFNYAFIEFDTNQAADMALHT 138
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTPLPP 340
N RI+ IK +W + + T++ P P
Sbjct: 139 LNGRIINNSEIKINWAFQSSTINTAAHPDEP 169
>gi|452819166|gb|EME26242.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
gi|452825749|gb|EME32744.1| oligouridylate-binding protein, putative [Galdieria sulphuraria]
Length = 309
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 158/298 (53%), Gaps = 28/298 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
S+YVGN+ P+V LLQE+F GP++ K++ + +GFVD++DR +A A+
Sbjct: 14 SLYVGNLDPRVCTELLQEIFELIGPVKLAKVVGDRNTGRSLGFGFVDFYDRPTAIRAMEL 73
Query: 105 LNGRHIFGQPIKVNWAYASS-------QREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
++GR ++GQ I+++WA+A + Q ED + +FVG+L P+V + L FS F
Sbjct: 74 MHGRRVYGQEIRIDWAHAGAGAAGRILQDEDLANMHTIFVGNLGPDVDEEKLMKAFSSFS 133
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSG 216
+ + A++ D +TG G+GFVSFR ++DA A+ + G L R +R +WA K A G
Sbjct: 134 SVAGAKISKDVETGLPAGYGFVSFREKKDADLAMQTMTGYILSGRALRIDWARGKNAARG 193
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S S S V I +++ +P +VYV L S++ + F
Sbjct: 194 VSTFGSFSSSTVTPKPDIQTIMKQT-------DPLNVSVYVRGLPSDIDVAAIRESFRGF 246
Query: 277 CVGTIEDVRV-------QRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G IEDV++ +D+ + FV++ +H AA AI + + + G ++C WG +
Sbjct: 247 --GDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAIHDMHGKEIAGCVVQCEWGRE 302
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D + +++VGN+ P V L + FSS + G K+ K ++ YGFV + +++ A
Sbjct: 104 DLANMHTIFVGNLGPDVDEEKLMKAFSSFSSVAGAKISKDVETGLPAGYGFVSFREKKDA 163
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASS-------------------------QREDTSGHF 133
LA+ T+ G + G+ ++++WA + ++ +
Sbjct: 164 DLAMQTMTGYILSGRALRIDWARGKNAARGVSTFGSFSSSTVTPKPDIQTIMKQTDPLNV 223
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARV-MWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
+V+V L ++ A + F F D ++ + T + R + FV F++ E A AI+
Sbjct: 224 SVYVRGLPSDIDVAAIRESFRGFGDIEDVKIPDAARMTAQDRIYAFVKFKSHEVAARAIH 283
Query: 193 DLNGKWLGNRQIRCNWAAKGATS 215
D++GK + ++C W +G S
Sbjct: 284 DMHGKEIAGCVVQCEWGREGLKS 306
>gi|45201486|ref|NP_987056.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|44986420|gb|AAS54880.1| AGR390Cp [Ashbya gossypii ATCC 10895]
gi|374110307|gb|AEY99212.1| FAGR390Cp [Ashbya gossypii FDAG1]
Length = 378
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 161/322 (50%), Gaps = 44/322 (13%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALA 101
++ R +YVGN+ + A L++ F GP+ K++ ++++Y FV+Y R A +A
Sbjct: 32 TSDRILYVGNLDKTINEATLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYRQPRDANVA 91
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
TL+G+ I IK+NWA+ SQ+ + FN+FVGDL+ +V D TL + F FPT
Sbjct: 92 FQTLDGKQIENNVIKINWAF-QSQQVSSDDTFNLFVGDLNVDVDDETLSSTFKEFPTFIQ 150
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
A VMWD ++GRSRG+GFVSF QE+AQ A++ G L R IR NWAAK + +
Sbjct: 151 AHVMWDMQSGRSRGYGFVSFGEQEEAQKAMDAKQGFNLNGRAIRVNWAAKRESQHAARPR 210
Query: 222 SD-----SKSVVELTNGISDGQEKSNEDAPEN-------------NPQ------------ 251
S+ S + G+ G AP NPQ
Sbjct: 211 SNRGGFRGGSGHQPFRGMPQGPHLGGA-APAGPMQLQGPPVPSPVNPQAVEAMIRRAPQR 269
Query: 252 YTTVYVGNL---SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TT Y+GN+ + E + L ++F G I D + +KG F++Y TH +AAL I
Sbjct: 270 VTTAYIGNIPHFAQEPDLIPLLQNF-----GFIIDFKHYAEKGCCFIKYDTHDQAALCIV 324
Query: 309 MGNARILCGKPIKCSWG-SKPT 329
G+ ++ WG KP+
Sbjct: 325 ALANFPFQGRTLRTGWGKEKPS 346
>gi|324510042|gb|ADY44204.1| Nucleolysin TIAR [Ascaris suum]
Length = 367
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 125/215 (58%), Gaps = 18/215 (8%)
Query: 115 IKVNWAYASSQ-REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRS 173
+K NWA + + DTS HF+VFVGDL+ E+ + L A F+ + S+A+V+ D +T +S
Sbjct: 115 LKANWAMQNQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKS 174
Query: 174 RGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNG 233
+G+GFVSF ++E A+ AI +NG+ +G RQIR NWA++ S +E + + ++ E+ N
Sbjct: 175 KGYGFVSFPSKESAEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKE-QTFDEVFNA 233
Query: 234 ISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFG 293
T+VYVGN+ S T DL F + +G I +VR+ + +G+
Sbjct: 234 TRADN--------------TSVYVGNVHSSTTEEDLREAFAS--IGAISEVRIFKQQGYA 277
Query: 294 FVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
FVRY+T A AI N + + G+ IKCSWG P
Sbjct: 278 FVRYATKEAATRAIMQMNGKEINGQNIKCSWGRTP 312
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 93/192 (48%), Gaps = 26/192 (13%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N P+ D S V+VG++ ++ N L+ F++ G + K+I+ ++ YGFV +
Sbjct: 123 NQMPKVDTSKHFHVFVGDLATEIDNNALKAAFAAYGEISEAKVIRDPQTMKSKGYGFVSF 182
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAY---ASSQREDTSGH-----FN--------VF 136
+ SA AI +NG+ I + I+ NWA AS++ T FN V+
Sbjct: 183 PSKESAEKAIAGMNGQLIGRRQIRTNWASRKPASAEEAHTKEQTFDEVFNATRADNTSVY 242
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG++ T+ L F+ S+ R+ + +G+ FV + +E A AI +NG
Sbjct: 243 VGNVHSSTTEEDLREAFASIGAISEVRIF------KQQGYAFVRYATKEAATRAIMQMNG 296
Query: 197 KWLGNRQIRCNW 208
K + + I+C+W
Sbjct: 297 KEINGQNIKCSW 308
>gi|2982251|gb|AAC32113.1| putative RNA-binding protein [Picea mariana]
Length = 169
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 104/171 (60%), Gaps = 29/171 (16%)
Query: 268 DLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+LHR F AL VG IEDVRVQRDKGFGFVRY +H EAALAIQ+ N R++CGK IKCSWGSK
Sbjct: 1 ELHRQFLALGVGVIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVICGKSIKCSWGSK 60
Query: 328 PTPPGTSSTPLPPPPAPHL---------PGFSATDLAAYERQIALSKIAGAQALMHPQAQ 378
PTPPG SS LPPP AP G++A D+ AY RQ+ +S+ Q L+ AQ
Sbjct: 61 PTPPGASSNALPPPSAPFQGVVAPQGLNQGYTAADILAY-RQLNMSQAGAGQPLLPLSAQ 119
Query: 379 HALKLG-----MGAAGASQAIYDSSGFQNVATT------------QQLMYY 412
+ LG MG G +Q +YD+ FQ A QQ+MYY
Sbjct: 120 QGMGLGLGHGPMGVVGPNQNVYDN--FQAGAGLPAAAAAAAAAMRQQIMYY 168
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
V+ D + R +GFGFV +R+ E+A AI NG+ + + I+C+W +K
Sbjct: 13 VIEDVRVQRDKGFGFVRYRSHEEAALAIQLANGRVICGKSIKCSWGSK 60
>gi|367000405|ref|XP_003684938.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
gi|357523235|emb|CCE62504.1| hypothetical protein TPHA_0C03520 [Tetrapisispora phaffii CBS 4417]
Length = 442
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 104/169 (61%), Gaps = 2/169 (1%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAI 102
++ + +YVGN+ + L++ F GP+ K+I K + +Y FV+Y A +A
Sbjct: 76 TSDKILYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNNSVNYAFVEYLQHHDADVAF 135
Query: 103 VTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LNG+ I + +K+NWA+ S Q FN+FVGDL+ +V D TL FS FP+ A
Sbjct: 136 KNLNGKTIETKVLKINWAFQSQQTTSDESLFNLFVGDLNVDVDDETLGHAFSEFPSFVQA 195
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TGRSRG+GF+SF NQEDAQ+A++ + L RQIR NWA+K
Sbjct: 196 HVMWDMQTGRSRGYGFISFSNQEDAQTAMDKMQSTELNGRQIRINWASK 244
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L + + TL F + S+ +V+ D+ S + FV + DA A +L
Sbjct: 81 LYVGNLDKSINEETLKQYFQIGGPISNVKVINDKNN--SVNYAFVEYLQHHDADVAFKNL 138
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + + ++ NWA + +Q++ +S+ L
Sbjct: 139 NGKTIETKVLKINWAFQS------QQTTSDESLFNL------------------------ 168
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
+VG+L+ +V L F + + D++ R +G+GF+ +S +A A+
Sbjct: 169 -FVGDLNVDVDDETLGHAFSEFPSFVQAHVMWDMQTGRSRGYGFISFSNQEDAQTAMDKM 227
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+ I+ +W SK
Sbjct: 228 QSTELNGRQIRINWASK 244
>gi|156845624|ref|XP_001645702.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
gi|156116369|gb|EDO17844.1| hypothetical protein Kpol_1043p34 [Vanderwaltozyma polyspora DSM
70294]
Length = 442
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 108/169 (63%), Gaps = 2/169 (1%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRSAALAI 102
++ + +YVGN+ + +L++ F GP+ K+I K ++++Y FV+Y A++A+
Sbjct: 74 TSDKILYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNNEANYAFVEYSQHHDASIAL 133
Query: 103 VTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
TLNG+ I +K+NWA+ S Q + FN+F+GDL+ +V D TL A F F + A
Sbjct: 134 KTLNGKQIENNTLKINWAFQSQQNTTSDETFNLFIGDLNVDVDDETLVAAFKDFKSFIQA 193
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TGRSRG+GFVSF N +DAQ A++ + G L RQ+R NWA+K
Sbjct: 194 HVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTMQGSELNGRQLRINWASK 242
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L + + L F V ++ +V+ D+ + FV + DA A+ L
Sbjct: 79 LYVGNLDKSINEDILKQYFQVGGPITNVKVINDKNN--EANYAFVEYSQHHDASIALKTL 136
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + +Q++ S L
Sbjct: 137 NGKQIENNTLKINWAFQS------QQNTTSDETFNL------------------------ 166
Query: 255 VYVGNLSSEV---TSVDLHRHFHALCVGTIE-DVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++G+L+ +V T V + F + + D++ R +G+GFV +S +A +A+
Sbjct: 167 -FIGDLNVDVDDETLVAAFKDFKSFIQAHVMWDMQTGRSRGYGFVSFSNLDDAQVAMDTM 225
Query: 311 NARILCGKPIKCSWGSK 327
L G+ ++ +W SK
Sbjct: 226 QGSELNGRQLRINWASK 242
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN+ T DL G I D + +KG F++Y TH +AA+ I +
Sbjct: 324 TTVYIGNIPHFATEADLIPLLQNF--GFILDFKHYPEKGNCFIKYDTHEQAAVCIVVLAN 381
Query: 313 RILCGKPIKCSWGSK-----PTPPGTSSTPLPP 340
G+ +K WG + P PP + +PP
Sbjct: 382 FPFQGRNLKTGWGKEKSTFMPMPPQDPNGQMPP 414
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 16/98 (16%)
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG 291
N I+ G+E S++ +YVGNL + L ++F G I +V+V DK
Sbjct: 66 NAINGGRETSDK----------ILYVGNLDKSINEDILKQYFQ--VGGPITNVKVINDKN 113
Query: 292 ----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ FV YS H +A++A++ N + + +K +W
Sbjct: 114 NEANYAFVEYSQHHDASIALKTLNGKQIENNTLKINWA 151
>gi|307108302|gb|EFN56542.1| hypothetical protein CHLNCDRAFT_144188, partial [Chlorella
variabilis]
Length = 330
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 6/149 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAI 102
+++Y+GN+HP VT LQEVF+ G + K+IK DK++ YGF + D SA A+
Sbjct: 182 KTLYLGNLHPFVTEQTLQEVFAGLGGITELKVIK-DKATGVSAGYGFAKFTDSSSAQAAL 240
Query: 103 VTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
+ +FGQ ++NWA+ Q+E+ + HF+ FVGDLS +VTDA L F P CSDA
Sbjct: 241 DKVAKTVLFGQEARINWAFQKEQKEEVATHFHAFVGDLSSDVTDAMLHGAFQNCPGCSDA 300
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
RVMWD TGRSRG+GFVSFR++E+A++AI
Sbjct: 301 RVMWDHATGRSRGYGFVSFRHREEAEAAI 329
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 84/184 (45%), Gaps = 39/184 (21%)
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
G+ +++G+L P VT+ TL F+ ++ +V+ D+ TG S G+GF F + AQ+A
Sbjct: 180 GNKTLYLGNLHPFVTEQTLQEVFAGLGGITELKVIKDKATGVSAGYGFAKFTDSSSAQAA 239
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNP 250
++ + L ++ R NWA + +E+ E A
Sbjct: 240 LDKVAKTVLFGQEARINWAFQ--------------------------KEQKEEVA----- 268
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAA 304
+ +VG+LSS+VT LH F C G D RV R +G+GFV + EA
Sbjct: 269 THFHAFVGDLSSDVTDAMLHGAFQN-CPG-CSDARVMWDHATGRSRGYGFVSFRHREEAE 326
Query: 305 LAIQ 308
AIQ
Sbjct: 327 AAIQ 330
>gi|254576977|ref|XP_002494475.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
gi|238937364|emb|CAR25542.1| ZYRO0A02398p [Zygosaccharomyces rouxii]
Length = 410
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 161/354 (45%), Gaps = 57/354 (16%)
Query: 29 QIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCK-LIKKD--KS 85
+ P++ N ++ R +YVGN+ +T +L++ F G + K +I K+ ++
Sbjct: 37 ETTPVVPANATKGGRETSDRVLYVGNLDKSITEEVLRQYFQVGGQISNVKVMIDKNNARA 96
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVT 145
+Y FV+YF A +A+ TLNG+ I +++NWA+ S Q +N+FVGDLS +V
Sbjct: 97 NYAFVEYFKSHDANIALQTLNGKQIENNVVRINWAFQSQQALPDENTYNLFVGDLSVDVD 156
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
D TL F FP+ VMWD +TG SRG+GFVSF +QE AQ A++ + + L R +R
Sbjct: 157 DETLCNAFRSFPSFIQGHVMWDMQTGGSRGYGFVSFGDQEQAQLAMDSMQSQELNGRPLR 216
Query: 206 CNWAAK----------GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA---------- 245
NWA+K G +G+ ++ + NG G ++
Sbjct: 217 INWASKRENHHNGNRRGGLAGN--RNGGMRLFPNNNNGFGRGMPMPPPNSMGIPLGGTLP 274
Query: 246 ------------------PENNPQ------------YTTVYVGNLSSEVTSVDLHRHFHA 275
P NPQ TT Y+GN+ T DL
Sbjct: 275 PNAQPMGAPPSGPAPTVPPPVNPQAVEAMIRRAPPRVTTSYIGNIPHFATDSDLIPLLQN 334
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G I D + +KG FV+Y TH +AA+ I G+ ++ WG + T
Sbjct: 335 F--GFILDFKHYPEKGCCFVKYDTHEQAAVCIVALANFFFQGRNLRTGWGKERT 386
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/294 (31%), Positives = 159/294 (54%), Gaps = 19/294 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
++++VG++H + + L+ F TG + K+I+ ++ YGFV++F R +A +
Sbjct: 8 IKTLWVGDLHQWMDDNYLRTCFGHTGEVSSIKIIRNKQTGQSEGYGFVEFFSRATAEKIL 67
Query: 103 VTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ NG + QP ++NWA S+ +R D ++FVGDL+ +VTDA L F+ +P
Sbjct: 68 HSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYP 127
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+N++NG + +R +R A SG
Sbjct: 128 SVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGY 187
Query: 218 EKQSSDSKSVV---ELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
++Q S V+ +NG ++N D+ TT++VG L SEVT DL + F
Sbjct: 188 QQQYSSQALVLAGGNASNGAVAQGSQANGDSTN-----TTIFVGGLDSEVTDEDLRQSFS 242
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 243 QF--GEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNP 294
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 48/236 (20%)
Query: 14 QQSLYQYHPSLLAAPQIEPILSGNLPP------RFDASTCRSVYVGNIHPQVTNALLQEV 67
++ L+ Y+ +L+ P E N R DA + S++VG++ VT+ALLQE
Sbjct: 64 EKILHSYNGTLM--PNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQET 121
Query: 68 FSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-- 120
F++ P ++G K++ + YGFV + D + A+ +NG + +P+++ A
Sbjct: 122 FATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATP 181
Query: 121 ---------YAS------------------SQREDTSGHFNVFVGDLSPEVTDATLFACF 153
Y+S SQ S + +FVG L EVTD L F
Sbjct: 182 KKASGYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSF 241
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
S F ++ +G GFV F N+ A+ A+ LNG +G + +R +W
Sbjct: 242 SQFGEVVSVKIP------VGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWG 291
>gi|344301362|gb|EGW31674.1| hypothetical protein SPAPADRAFT_62285 [Spathaspora passalidarum
NRRL Y-27907]
Length = 478
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 111/173 (64%), Gaps = 13/173 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
+ +YVGN+ ++ L++ F+S G ++ K++ DK+ +Y F++Y + ++A +A+
Sbjct: 71 KILYVGNLSKSISEEFLKDTFASAGAIQSVKILN-DKNKPGFNYAFIEYENNQAADMALN 129
Query: 104 TLNGRHIFGQPIKVNWAYASSQ------REDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
T+NG+ + IK+NWA+ S+ ED S FN+FVGDLSPE+ D L FS F
Sbjct: 130 TMNGKILQNFEIKINWAFQSATITTANTPEDPS--FNIFVGDLSPEINDEKLKQAFSKFK 187
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+ A VMWD +T RSRG+GFV+F NQ DA+ A+ +NG+WL R IRCNWA+
Sbjct: 188 SLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTMNGEWLNGRAIRCNWAS 240
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 32/196 (16%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +++ L F+ +++ D K + F+ + N + A A+N +
Sbjct: 73 LYVGNLSKSISEEFLKDTFASAGAIQSVKILND-KNKPGFNYAFIEYENNQAADMALNTM 131
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK L N +I+ NWA + AT + + PE+ P +
Sbjct: 132 NGKILQNFEIKINWAFQSATI-------------------------TTANTPED-PSFN- 164
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS E+ L + F + D++ R +G+GFV +S +A LA+Q
Sbjct: 165 IFVGDLSPEINDEKLKQAFSKFKSLKQAHVMWDMQTSRSRGYGFVTFSNQSDAELALQTM 224
Query: 311 NARILCGKPIKCSWGS 326
N L G+ I+C+W S
Sbjct: 225 NGEWLNGRAIRCNWAS 240
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ DL G I D + ++G FV+Y H AALAI
Sbjct: 363 TTVYLGNIAHFTQQGDLIPLLTNF--GYIVDFKFHPERGCAFVKYDNHERAALAIVQLAG 420
Query: 313 RILCGKPIKCSWG 325
+ G+P+KC WG
Sbjct: 421 FNINGRPLKCGWG 433
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 223 DSKSVVELT--NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
D+K +T + + G+E SN+ +YVGNLS ++ L F + G
Sbjct: 49 DTKETTPITPASAVEGGREVSNK----------ILYVGNLSKSISEEFLKDTFAS--AGA 96
Query: 281 IEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
I+ V++ DK + F+ Y + A +A+ N +IL IK +W + T++
Sbjct: 97 IQSVKILNDKNKPGFNYAFIEYENNQAADMALNTMNGKILQNFEIKINWAFQSATITTAN 156
Query: 336 TPLPP 340
TP P
Sbjct: 157 TPEDP 161
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 108/169 (63%), Gaps = 8/169 (4%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTG-PLEGCKLIK-KDKS--SYGFVDYFDRRSAALAIVTL 105
+YVGN+ + +++++FS G P++ KL+ K+K+ +Y F++Y +A +A+ TL
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSD 161
NGR I IKVNWAY S+ T FN+FVGDLSPEV D L FS F +
Sbjct: 144 NGRVIDESEIKVNWAYQSAAIASTLNSEEPLFNIFVGDLSPEVNDEGLRNAFSKFGSLKQ 203
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F Q DA+ A+ +NG+WLG R IRCNWA+
Sbjct: 204 AHVMWDMQTSRSRGYGFVTFSEQADAELALQTMNGEWLGGRAIRCNWAS 252
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L ++ + FSV + + K + F+ + + + A A+N L
Sbjct: 84 LYVGNLPKSASEEMVKDLFSVGGNPIKTIKLLNDKNKAGFNYAFIEYDSNDTADMALNTL 143
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + +I+ NWA + A S + P +
Sbjct: 144 NGRVIDESEIKVNWAYQSAAIASTLNSEE--------------------------PLFN- 176
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS EV L F + D++ R +G+GFV +S +A LA+Q
Sbjct: 177 IFVGDLSPEVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQTM 236
Query: 311 NARILCGKPIKCSWGS 326
N L G+ I+C+W S
Sbjct: 237 NGEWLGGRAIRCNWAS 252
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 253 TTVYVGNL---SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
TTVY+GN+ + + + L ++F G I D + ++G FV+Y TH AALAI
Sbjct: 376 TTVYLGNIAHFTQQQEIIPLLQNF-----GFIVDFKFHPERGCAFVKYDTHERAALAIIQ 430
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTP 337
L G+P+KC WG K PP + P
Sbjct: 431 LAGFNLNGRPLKCGWG-KERPPQFQNFP 457
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
+++VG++ P+V + L+ FS G L+ ++ ++S YGFV + ++ A LA+ T
Sbjct: 176 NIFVGDLSPEVNDEGLRNAFSKFGSLKQAHVMWDMQTSRSRGYGFVTFSEQADAELALQT 235
Query: 105 LNGRHIFGQPIKVNWAYASSQR 126
+NG + G+ I+ NWA Q+
Sbjct: 236 MNGEWLGGRAIRCNWASHKQQQ 257
>gi|354545437|emb|CCE42165.1| hypothetical protein CPAR2_807140 [Candida parapsilosis]
Length = 420
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 112/176 (63%), Gaps = 13/176 (7%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAAL 100
++ + +YVGN+ + + E+FS + P++ KL+ DK+ +Y F+++ D + A +
Sbjct: 51 TSNKILYVGNLPKSASEEQISELFSVSKPIKSIKLLN-DKNKLGFNYAFIEFDDNQEADM 109
Query: 101 AIVTLNGRHIFGQPIKVNWAY------ASSQREDTSGHFNVFVGDLSPEVTDATLFACFS 154
A+ TLNG+ + I+VNWAY +SS ED + +N+FVGDLS EV D L F+
Sbjct: 110 ALSTLNGKLLNNCEIRVNWAYQSATIASSSTPEDPT--YNLFVGDLSSEVNDEALKKAFN 167
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F + +A VMWD +T RSRG+GFV+F QEDA+ A+ +NG WLG R IRCNWAA
Sbjct: 168 KFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTMNGAWLGGRAIRCNWAA 223
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 32/196 (16%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L ++ + FSV +++ D K + F+ F + ++A A++ L
Sbjct: 56 LYVGNLPKSASEEQISELFSVSKPIKSIKLLND-KNKLGFNYAFIEFDDNQEADMALSTL 114
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK L N +IR NWA + AT D P Y
Sbjct: 115 NGKLLNNCEIRVNWAYQSATIASSSTPED--------------------------PTYN- 147
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LSSEV L + F+ + D++ R +G+GFV +S +A LA+Q
Sbjct: 148 LFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFSKQEDAELALQTM 207
Query: 311 NARILCGKPIKCSWGS 326
N L G+ I+C+W +
Sbjct: 208 NGAWLGGRAIRCNWAA 223
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ ++ G I D + +KG FV+Y +H AALAI
Sbjct: 332 TTVYLGNIAHATQQQEMLPLLQNF--GFIVDFKFHPEKGCAFVKYDSHERAALAIIQLAG 389
Query: 313 RILCGKPIKCSWGSKPTPP 331
L G+P+KC WG K PP
Sbjct: 390 FNLNGRPLKCGWG-KERPP 407
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQM 309
+YVGNL + + F I+ +++ DK + F+ + + EA +A+
Sbjct: 56 LYVGNLPKSASEEQISELFS--VSKPIKSIKLLNDKNKLGFNYAFIEFDDNQEADMALST 113
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTPLPP 340
N ++L I+ +W + +SSTP P
Sbjct: 114 LNGKLLNNCEIRVNWAYQSATIASSSTPEDP 144
>gi|294884878|gb|ADF47447.1| TIA1-like protein [Dugesia japonica]
Length = 323
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 99/309 (32%), Positives = 153/309 (49%), Gaps = 36/309 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAALAIVT 104
R++YVGN+ V + LL +F + G C +I+ + Y F++Y D SA+LA+
Sbjct: 7 RTIYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRDFSCQTNPYAFIEYTDHSSASLALSA 66
Query: 105 LNGRHIFGQPIKVNW----------AYASSQREDTSGHFNVFVGDLSPEVTDATLFACFS 154
++G +++ IKVNW A +S + D S +FVGD+ +V + L FS
Sbjct: 67 MDGIYMWNNQIKVNWSSGPSAVPGPAAVASAKIDYSNSVQIFVGDIGLDVDEPMLKEGFS 126
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F DA+V+ G+SRGF FVSF N+++A+ AI ++ W NR I+CNWA +
Sbjct: 127 QFGQLIDAKVV-RYPDGQSRGFAFVSFSNRDEAERAIQSMHKTWFHNRTIKCNWATRNGL 185
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVG--NLSSEVTSVDLHRH 272
G++ + E ++AP N T VYV NL+ E+ L+ H
Sbjct: 186 DGEQFIKYTPRPY-----------ELVYKEAPLTN---TNVYVAGENLTEEL----LNCH 227
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
F G I+ V+V +KG F+ + TH AA AI + + IKC+WG +
Sbjct: 228 FQEF--GRIDSVKVYPEKGHAFINFVTHEAAARAISQRHGYKINDNVIKCNWGKENFGIS 285
Query: 333 TSSTPLPPP 341
T++ P P
Sbjct: 286 TATIPALQP 294
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 89/213 (41%), Gaps = 29/213 (13%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L V D L F F C ++ D + ++ + F+ + + A A++ +
Sbjct: 9 IYVGNLPDAVNDQLLIRIFGNFGQCISCHIIRD-FSCQTNPYAFIEYTDHSSASLALSAM 67
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
+G ++ N QI+ NW++ + + +K ++ +N +
Sbjct: 68 DGIYMWNNQIKVNWSSGPSAVPGPAAVASAK--IDYSNSVQ------------------- 106
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQR-----DKGFGFVRYSTHPEAALAIQM 309
++VG++ +V L F G + D +V R +GF FV +S EA AIQ
Sbjct: 107 IFVGDIGLDVDEPMLKEGFSQF--GQLIDAKVVRYPDGQSRGFAFVSFSNRDEAERAIQS 164
Query: 310 GNARILCGKPIKCSWGSKPTPPGTSSTPLPPPP 342
+ + IKC+W ++ G P P
Sbjct: 165 MHKTWFHNRTIKCNWATRNGLDGEQFIKYTPRP 197
>gi|366990603|ref|XP_003675069.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
gi|342300933|emb|CCC68698.1| hypothetical protein NCAS_0B06140 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 102/167 (61%), Gaps = 3/167 (1%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAIVT 104
R +YVGN+ + LL++ F G + K++ K + +Y F++Y A +A+ T
Sbjct: 83 RVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNNNVNYAFIEYLKSHDANVALQT 142
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LNG I G+ +++NWA+ S Q ++ FN+FVGDL+ +V D TL F FP+ A V
Sbjct: 143 LNGIQIEGKTVRINWAFQSQQTTNSDDTFNLFVGDLNVDVDDETLSHAFDQFPSYVQAHV 202
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
MWD +TGRSRG+GFVSF +QE AQ A+N + G + R +R NWA K
Sbjct: 203 MWDMQTGRSRGYGFVSFADQEQAQEAMNVMQGMPINGRAVRINWATK 249
>gi|350589206|ref|XP_003482814.1| PREDICTED: nucleolysin TIAR-like [Sus scrofa]
Length = 320
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 134/228 (58%), Gaps = 19/228 (8%)
Query: 105 LNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS--- 160
+NGR I G+ ++VNWA SSQ++DTS HF+VFVGDLSPE+T + + F+ F S
Sbjct: 4 MNGRKILGKEVRVNWATTPSSQKKDTSNHFHVFVGDLSPEITAEDIKSAFTSFGKISIAM 63
Query: 161 DARVMWDQKTGRSRGFGFVS-FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
DARV+ D TG+S+G+G VS F N+ DA++AI + G+WLG RQI+ +WA + +
Sbjct: 64 DARVVKDMATGKSKGYGSVSFFYNKLDAENAIVRMGGQWLGGRQIKTSWATRKPPAPKST 123
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q +++K Q K + +++ + TVY G ++S +T + + F G
Sbjct: 124 QENNTK------------QLKFEDVVNQSSSKNCTVYCGGIASGLTDQLMRQTFSPF--G 169
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV +K + FVR+STH AA AI + G+ +KC WG +
Sbjct: 170 QIMEIRVFPEKRYSFVRFSTHGSAAHAIVSVTGTTIEGRVVKCYWGKE 217
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 86/196 (43%), Gaps = 33/196 (16%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLE---GCKLIKK----DKSSYGFVDYF-D 94
D S V+VG++ P++T ++ F+S G + +++K YG V +F +
Sbjct: 28 DTSNHFHVFVGDLSPEITAEDIKSAFTSFGKISIAMDARVVKDMATGKSKGYGSVSFFYN 87
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWAY------ASSQREDT-------------SGHFNV 135
+ A AIV + G+ + G+ IK +WA S+Q +T S + V
Sbjct: 88 KLDAENAIVRMGGQWLGGRQIKTSWATRKPPAPKSTQENNTKQLKFEDVVNQSSSKNCTV 147
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G ++ +TD + FS F + RV +++ + FV F A AI +
Sbjct: 148 YCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKR------YSFVRFSTHGSAAHAIVSVT 201
Query: 196 GKWLGNRQIRCNWAAK 211
G + R ++C W +
Sbjct: 202 GTTIEGRVVKCYWGKE 217
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + + Y FV + SAA AIV++ G
Sbjct: 146 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKR--YSFVRFSTHGSAAHAIVSVTGT 203
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFV---------GDLSP 142
I G+ +K W S + + + GDLSP
Sbjct: 204 TIEGRVVKCYWGKESPDMTENYSRWGQWSQVYGDPQEHGDLSP 246
>gi|444316792|ref|XP_004179053.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
gi|387512093|emb|CCH59534.1| hypothetical protein TBLA_0B07170 [Tetrapisispora blattae CBS 6284]
Length = 470
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/183 (40%), Positives = 112/183 (61%), Gaps = 4/183 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDK-SSYGFVDYFDRRSAALA 101
++ + +YVGN+ + L++ F GP+ K+I K +K +Y FV+Y A +A
Sbjct: 80 TSDKILYVGNLDKSINEDSLKQYFQVGGPIANVKIIVDKNNKYCNYAFVEYLKHHDANVA 139
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+HI + +K+NWA+ SQ+ FN+F+GDL+ +V D +L A F FP+
Sbjct: 140 LQTLNGKHIEKKIVKINWAF-QSQQSSNDDTFNLFIGDLNIDVNDESLTAAFKDFPSFVQ 198
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
A VMWD +TGRSRG+GF SF Q DAQ A++ + GK L R IR NWA+K ++QS
Sbjct: 199 AHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQMQGKELNGRPIRINWASKRDNQQGQQQS 258
Query: 222 SDS 224
++
Sbjct: 259 HNN 261
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L + + +L F V ++ +++ D K + + FV + DA A+ L
Sbjct: 85 LYVGNLDKSINEDSLKQYFQVGGPIANVKIIVD-KNNKYCNYAFVEYLKHHDANVALQTL 143
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + + ++ NWA + Q+ SN+D
Sbjct: 144 NGKHIEKKIVKINWAFQS-------------------------QQSSNDDT-------FN 171
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
+++G+L+ +V L F + + D++ R +G+GF +ST +A LA+
Sbjct: 172 LFIGDLNIDVNDESLTAAFKDFPSFVQAHVMWDMQTGRSRGYGFASFSTQNDAQLAMDQM 231
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+PI+ +W SK
Sbjct: 232 QGKELNGRPIRINWASK 248
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 151/322 (46%), Gaps = 46/322 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLI---KKDKSSYGFVDYFDRRSAALAIVT 104
++YVGNI V+ +L+++F S G ++ K++ K +Y F++Y D A A+
Sbjct: 158 TLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAENALQA 217
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LNG + P+K+ WAY +Q+ + +F +FVGDLSPE+ D +L A FS FP+ A V
Sbjct: 218 LNGTVLANYPLKITWAY-RTQQSRSGENFTLFVGDLSPEIDDDSLAATFSKFPSFVQANV 276
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-------KGATSGD 217
MWD KTGRSRG+GFVSF+N +DA++ + +NG LG R IR NWA +G G+
Sbjct: 277 MWDMKTGRSRGYGFVSFQNNQDAETVLQTMNGMSLGGRSIRLNWAVRRQNQNFRGMARGN 336
Query: 218 E---------------KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
+ +G + P N +G S
Sbjct: 337 SRGMAAGMAGMGRMMGGPAGAGAPPPPPNAMAGNGMDMLAGGLPGNAVNARGPILGPQSY 396
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGF-VRYSTHPE-------------A 303
E+ A+ +G + Q D + FG+ V + PE A
Sbjct: 397 EMVLRQTPSWLCAVYLGNLAHYTQQSDLIPLLQNFGYIVNFKLLPEKGCAFVTYDSHERA 456
Query: 304 ALAIQMGNARILCGKPIKCSWG 325
ALAI N + G+P+KC WG
Sbjct: 457 ALAIVQLNGFNVNGRPLKCGWG 478
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-----GFGFVRYSTHPEAALAI 307
TT+YVGN+ + V S D+ R I+ +++ DK + F+ Y H +A A+
Sbjct: 157 TTLYVGNIDNSV-SEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAENAL 215
Query: 308 QMGNARILCGKPIKCSW 324
Q N +L P+K +W
Sbjct: 216 QALNGTVLANYPLKITW 232
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY+GN+ + L + + G + KL+ + + FV Y AALAIV LNG
Sbjct: 409 AVYLGNLAHYTQQSDLIPLLQNFGYIVNFKLLPEKGCA--FVTYDSHERAALAIVQLNGF 466
Query: 109 HIFGQPIKVNWAYAS 123
++ G+P+K W A+
Sbjct: 467 NVNGRPLKCGWGKAN 481
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 160/296 (54%), Gaps = 21/296 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLE--GCKLIKKDKSS----YGFVDYFDRRSAAL 100
++++VG++H + + L+ F TG ++ K+I+ ++ YGFV++F R +A
Sbjct: 80 IKTLWVGDLHQWMDDNYLRTCFGHTGEVKVSSIKIIRNKQTGQSEGYGFVEFFSRATAEK 139
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
+ + NG + QP ++NWA S+ +R D ++FVGDL+ +VTDA L F+
Sbjct: 140 ILHSYNGTLMPNTEQPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATR 199
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A+V+ D TGRS+G+GFV F ++ + A+N++NG + +R +R A S
Sbjct: 200 YPSVKGAKVVTDSNTGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKAS 259
Query: 216 GDEKQSSDSKSVV---ELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
G ++Q S V+ +NG ++N D+ TT++VG L SEVT DL +
Sbjct: 260 GYQQQYSSQALVLAGGNASNGAVAQGSQANGDSTN-----TTIFVGGLDSEVTDEDLRQS 314
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
F G + V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 315 FSQF--GEVVSVKIPVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNP 368
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 40/203 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R DA + S++VG++ VT+ALLQE F++ P ++G K++ + YGFV + D
Sbjct: 169 RTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 228
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YAS------------------SQR 126
+ A+ +NG + +P+++ A Y+S SQ
Sbjct: 229 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 288
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
S + +FVG L EVTD L FS F ++ +G GFV F N+
Sbjct: 289 NGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIP------VGKGCGFVQFANRNS 342
Query: 187 AQSAINDLNGKWLGNRQIRCNWA 209
A+ A+ LNG +G + +R +W
Sbjct: 343 AEDALQRLNGTVIGKQTVRLSWG 365
>gi|324497903|gb|ADY39600.1| putative TIA1 protein [Hottentotta judaicus]
Length = 196
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 120/183 (65%), Gaps = 3/183 (1%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK-DKSSYGFVDYFDRRSAALAIVTLNG 107
++YVGN+ P VT L+ +F+ GP+ GCK+I + Y FV++ D ++AA A++ +N
Sbjct: 1 TLYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPGNDPYCFVEFTDHQAAAAALLAMNK 60
Query: 108 RHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVM 165
R G+ +KVNWA + ++ ++DTS H+++FVGDLSPE+ L F+ F SD RV+
Sbjct: 61 RQCLGKEMKVNWATSPGNTPKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVV 120
Query: 166 WDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSK 225
D +T +S+G+GFVSF + DA++AI +NG+WLG+R IR NWA + + + +++K
Sbjct: 121 RDPQTLKSKGYGFVSFVKKTDAENAIATMNGQWLGSRAIRTNWATRKPPASRSQNETNAK 180
Query: 226 SVV 228
+
Sbjct: 181 PLT 183
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 89/212 (41%), Gaps = 51/212 (24%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L P VT+ + A F+ +++ + + + FV F + + A +A+ +
Sbjct: 2 LYVGNLDPSVTEELILALFTQIGPVIGCKIIHEPG---NDPYCFVEFTDHQAAAAALLAM 58
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + ++++ NWA +P N P+ T
Sbjct: 59 NKRQCLGKEMKVNWAT----------------------------------SPGNTPKQDT 84
Query: 255 -----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEA 303
++VG+LS E+ + L F G I D RV RD KG+GFV + +A
Sbjct: 85 SKHYHIFVGDLSPEIETQQLKEAFAPF--GEISDCRVVRDPQTLKSKGYGFVSFVKKTDA 142
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
AI N + L + I+ +W ++ PP + S
Sbjct: 143 ENAIATMNGQWLGSRAIRTNWATR-KPPASRS 173
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S ++VG++ P++ L+E F+ G + C++++ ++ YGFV + +
Sbjct: 80 PKQDTSKHYHIFVGDLSPEIETQQLKEAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKK 139
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA 120
A AI T+NG+ + + I+ NWA
Sbjct: 140 TDAENAIATMNGQWLGSRAIRTNWA 164
>gi|363750866|ref|XP_003645650.1| hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889284|gb|AET38833.1| Hypothetical protein Ecym_3344 [Eremothecium cymbalariae
DBVPG#7215]
Length = 421
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 159/350 (45%), Gaps = 63/350 (18%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALA 101
++ R +YVGN+ + L++ F GP+ K++ ++++Y FV+Y A +A
Sbjct: 60 TSDRILYVGNLDKAINEDTLKQYFQVGGPIANVKVLVDKNNEEANYAFVEYHQPHDANVA 119
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
TL+G+ I G IK+NWA+ SQ + FN+FVGDL+ +V D TL F FP+
Sbjct: 120 FQTLDGKQIEGNVIKINWAF-QSQHVSSDDTFNLFVGDLNVDVDDETLTGTFKEFPSFIQ 178
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
A VMWD +GRSRG+GFVSF Q+ AQ A+ G L R IR NWA+K + +
Sbjct: 179 AHVMWDMLSGRSRGYGFVSFSEQDVAQQAMESKQGFILNGRAIRINWASKREPQQHQPRP 238
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNP------------------------------- 250
++ NG S Q + P+ +P
Sbjct: 239 RSNRGGFRNNNGPSHQQFRG---IPQGHPMGSPNNAGPMGMAPQGMAPQGIPPQGPVVPP 295
Query: 251 ----------------QYTTVYVGNL---SSEVTSVDLHRHFHALCVGTIEDVRVQRDKG 291
+ TT Y+GN+ + E + L ++F G I D + +KG
Sbjct: 296 PVNPQAVEAMIRRAPQRVTTAYIGNIPHFAQEPDLIPLLQNF-----GFIIDFKHYPEKG 350
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP 341
F++Y TH +AA+ I G+ ++ WG K P + +PPP
Sbjct: 351 CCFIKYDTHEQAAVCIVALANFPFQGRNLRTGWG-KEKPAFIPNGMVPPP 399
>gi|149240785|ref|XP_001526223.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450346|gb|EDK44602.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 601
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 109/172 (63%), Gaps = 14/172 (8%)
Query: 50 VYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVT 104
+YVGN+ + + E+FSS + P++ KL+ DK+ +Y F+++ + A A+ +
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLN-DKNKLGFNYAFIEFNESEDAEKALNS 160
Query: 105 LNGRHIFGQPIKVNWAYAS------SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
LNG+ + G IKVNWAY S S E+ S +N+FVGDLS EV D L F+ F +
Sbjct: 161 LNGKDVNGSDIKVNWAYQSAAIAGGSTPEEPS--YNIFVGDLSSEVNDEALKKAFTKFGS 218
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F QEDA++A+ +NG+WLG R IRCNWA+
Sbjct: 219 LKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQSMNGEWLGGRAIRCNWAS 270
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 35/198 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L+ ++ + FS + + + K + F+ F EDA+ A+N L
Sbjct: 102 LYVGNLAKSASEEQINEIFSSVSNPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSL 161
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + I+ NWA + A I+ G PE P Y
Sbjct: 162 NGKDVNGSDIKVNWAYQSAA-------------------IAGG------STPEE-PSYN- 194
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIE------DVRVQRDKGFGFVRYSTHPEAALAIQ 308
++VG+LSSEV L + F G+++ D++ R +G+GFV + +A A+Q
Sbjct: 195 IFVGDLSSEVNDEALKKAFTKF--GSLKQAHVMWDMQTSRSRGYGFVTFGKQEDAENALQ 252
Query: 309 MGNARILCGKPIKCSWGS 326
N L G+ I+C+W S
Sbjct: 253 SMNGEWLGGRAIRCNWAS 270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHAL-CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
TTVY+GN++ LH L G I D + ++G FV+Y +H AALAI
Sbjct: 504 TTVYIGNIAH---FTQLHEMIPLLQSFGFIVDFKFHPERGCAFVKYDSHERAALAIIQLA 560
Query: 312 ARILCGKPIKCSWGSK 327
L G+P+KC WG +
Sbjct: 561 GFNLNGRPLKCGWGKE 576
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 16/128 (12%)
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
E Q +S V + ++ G+E SN+ +YVGNL+ + ++ F ++
Sbjct: 75 ETQLESEESTVAPASAVNGGREISNK----------ILYVGNLAKSASEEQINEIFSSVS 124
Query: 278 VGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPG 332
I+ +++ DK + F+ ++ +A A+ N + + G IK +W +
Sbjct: 125 -NPIKSIKLLNDKNKLGFNYAFIEFNESEDAEKALNSLNGKDVNGSDIKVNWAYQSAAIA 183
Query: 333 TSSTPLPP 340
STP P
Sbjct: 184 GGSTPEEP 191
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 146/283 (51%), Gaps = 28/283 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAALAIVT 104
R++YVGN+H T +L+ +F+ G + K+I S Y F+ Y A A+
Sbjct: 47 RTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYETHVGAQRALAA 106
Query: 105 LNGRHIFGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+NGR ++ P+KVNWA ++DTS ++FVGDL+ E+T L F F S+AR
Sbjct: 107 MNGRDVYKMPLKVNWATRPDGIKKDTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEAR 166
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D +T RS+G+GFV+F +E A+ AI ++N K + R++R NWA +
Sbjct: 167 VVRDAQTNRSKGYGFVAFLKKESAEMAITEMNNKSICGREVRTNWAT--------SRKLP 218
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEV-TSVDLHRHFHALCVGTIE 282
+V++ + ++ SN TTVYVG ++ +V T L F G +E
Sbjct: 219 PPTVID-PHKVAQASSFSN----------TTVYVGGITKDVHTQQVLQASFSRF--GVVE 265
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+VR + FGFV+ TH A AI N + G +KC WG
Sbjct: 266 EVRT--FETFGFVKMQTHQAATNAICEMNGASISGCTVKCRWG 306
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 47/213 (22%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L T+ L A F+V D +++ D S + F+++ AQ A+ +
Sbjct: 49 LYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSH-YCFITYETHVGAQRALAAM 107
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++ NWA + +GI K +
Sbjct: 108 NGRDVYKMPLKVNWATR-------------------PDGIKKDTSKDHH----------- 137
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
++VG+L+ E+T++DL F G I + RV RD KG+GFV + A +AI
Sbjct: 138 IFVGDLAQELTTLDLQNEFEKF--GKISEARVVRDAQTNRSKGYGFVAFLKKESAEMAIT 195
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPLPPP 341
N + +CG+ ++ +W +S LPPP
Sbjct: 196 EMNNKSICGREVRTNWA--------TSRKLPPP 220
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 30/222 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D S ++VG++ ++T LQ F G + ++++ +++ YGFV + + SA
Sbjct: 131 DTSKDHHIFVGDLAQELTTLDLQNEFEKFGKISEARVVRDAQTNRSKGYGFVAFLKKESA 190
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASS------------QREDTSGHFNVFVGDLSPEV-T 145
+AI +N + I G+ ++ NWA + + + + V+VG ++ +V T
Sbjct: 191 EMAITEMNNKSICGREVRTNWATSRKLPPPTVIDPHKVAQASSFSNTTVYVGGITKDVHT 250
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L A FS F + R FGFV + + A +AI ++NG + ++
Sbjct: 251 QQVLQASFSRFGVVEEVRTF--------ETFGFVKMQTHQAATNAICEMNGASISGCTVK 302
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
C W D K S+D ++G + S+ P+
Sbjct: 303 CRWG-----KDDHKSSNDGNHQYGHNYKEANGSQNSSNTTPQ 339
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/237 (38%), Positives = 135/237 (56%), Gaps = 21/237 (8%)
Query: 98 AALAIVTLNGRHIFG-QPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFS 154
+A AIV NG G + +K+NW + + DTS H ++FVGDLSPE+ TL F+
Sbjct: 59 SAAAIV--NGNAAAGLKEMKLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFA 116
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F SD RV+ D +T +S+G+GFVSF + +A+SAI +NG+WLG+R IR NWA +
Sbjct: 117 PFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPP 176
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
+ K S++K + E N+ +P N TVY G L+S +T + + F
Sbjct: 177 T--LKTDSNTKPLTF--------DEVYNQSSPTN----CTVYCGGLTSGLTDELVQKTFA 222
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
G I+++RV +DKG+ FVR++T A AI + + G+P+KCSWG + P
Sbjct: 223 PF--GNIQEIRVFKDKGYAFVRFATKESATHAIVAVHNSDINGQPVKCSWGKESGEP 277
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 30/219 (13%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRR 96
+ D S ++VG++ P++ L+E F+ G + C++++ ++ YGFV + +
Sbjct: 88 KADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKA 147
Query: 97 SAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVGD 139
A AI +NG+ + + I+ NWA + + + + V+ G
Sbjct: 148 EAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGG 207
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
L+ +TD + F+ F + RV D +G+ FV F +E A AI ++ +
Sbjct: 208 LTSGLTDELVQKTFAPFGNIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNSDI 261
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQ 238
+ ++C+W G SG+ S ++ V +S Q
Sbjct: 262 NGQPVKCSW---GKESGEPIVSQNASQVCSSQAALSSTQ 297
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
P+L +P+ + + + C +VY G + +T+ L+Q+ F+ G ++ ++ K
Sbjct: 176 PTLKTDSNTKPLTFDEVYNQSSPTNC-TVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFK 234
Query: 82 KDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQ 125
DK Y FV + + SA AIV ++ I GQP+K +W S +
Sbjct: 235 -DKG-YAFVRFATKESATHAIVAVHNSDINGQPVKCSWGKESGE 276
>gi|448521353|ref|XP_003868484.1| Pub1 protein [Candida orthopsilosis Co 90-125]
gi|380352824|emb|CCG25580.1| Pub1 protein [Candida orthopsilosis]
Length = 426
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 112/176 (63%), Gaps = 13/176 (7%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAAL 100
++ + +YVGN+ + + ++FS + P++ KL+ DK+ +Y F+++ + + A +
Sbjct: 56 TSNKILYVGNLPKSASEEQISKLFSVSKPIKSIKLLN-DKNKLGFNYAFIEFDENQDADM 114
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS------SQREDTSGHFNVFVGDLSPEVTDATLFACFS 154
A+ TLNG+ + IKVNWAY S S ED + +NVFVGDLS EV D L F+
Sbjct: 115 ALSTLNGKLLNNCEIKVNWAYQSATIASNSTPEDPT--YNVFVGDLSSEVNDEALKKAFN 172
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F + +A VMWD +T RSRG+GFV+F QEDA+ A+ +NG+WLG R IRCNWAA
Sbjct: 173 KFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQTMNGEWLGGRAIRCNWAA 228
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L ++ + FSV +++ D K + F+ F +DA A++ L
Sbjct: 61 LYVGNLPKSASEEQISKLFSVSKPIKSIKLLND-KNKLGFNYAFIEFDENQDADMALSTL 119
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK L N +I+ NWA + AT D P Y
Sbjct: 120 NGKLLNNCEIKVNWAYQSATIASNSTPED--------------------------PTY-N 152
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
V+VG+LSSEV L + F+ + D++ R +G+GFV + +A LA+Q
Sbjct: 153 VFVGDLSSEVNDEALKKAFNKFDSFKEAHVMWDMQTSRSRGYGFVTFGKQEDAELALQTM 212
Query: 311 NARILCGKPIKCSWGS 326
N L G+ I+C+W +
Sbjct: 213 NGEWLGGRAIRCNWAA 228
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 253 TTVYVGNL---SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
TTVY+GN+ + + + L ++F G I D + +KG FV+Y +H AALAI
Sbjct: 339 TTVYLGNIAHVTQQQEMIPLLQNF-----GFIVDFKFHPEKGCAFVKYDSHERAALAIIQ 393
Query: 310 GNARILCGKPIKCSWGSKPTPP 331
L G+P+KC WG K PP
Sbjct: 394 LAGFNLNGRPLKCGWG-KERPP 414
Score = 37.7 bits (86), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 19/147 (12%)
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELT--NGISDGQEKSNEDAPENNPQYTTVYVG 258
+++ N T D K+ +S +T + G+E SN+ +YVG
Sbjct: 15 DQRTETNEQENKMTQEDVKEDVKEESTTPVTPASATEGGRETSNK----------ILYVG 64
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNAR 313
NL + + + F I+ +++ DK + F+ + + +A +A+ N +
Sbjct: 65 NLPKSASEEQISKLFS--VSKPIKSIKLLNDKNKLGFNYAFIEFDENQDADMALSTLNGK 122
Query: 314 ILCGKPIKCSWGSKPTPPGTSSTPLPP 340
+L IK +W + ++STP P
Sbjct: 123 LLNNCEIKVNWAYQSATIASNSTPEDP 149
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/283 (33%), Positives = 147/283 (51%), Gaps = 55/283 (19%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R++YVGN+ VT + +F+ G + K+I FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI------------FDE------------ 81
Query: 108 RHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+KVNWA Q++ DT+ HF+VFVGDLS EV + L F F SDA+V
Sbjct: 82 -------MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 134
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS-- 222
+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + GD+++ S
Sbjct: 135 IRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--KPGDQEKPSHY 192
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
+ KS E+ N S T+VYVGN++S +T ++ + F + G I
Sbjct: 193 NEKSYDEIYNQTSGDN--------------TSVYVGNIAS-LTEDEIRQGFASF--GRIT 235
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 236 EVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 278
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 88 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 144
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 145 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 204
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ F ++ R+ + +G+ FV F N++ A
Sbjct: 205 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 257
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 258 KAIVQMNNQDVGGQLVRCSWGKTGDT 283
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI+
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 162
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTP 337
N + L + I+ +W ++ PG P
Sbjct: 163 QMNGQWLGRRTIRTNWATR--KPGDQEKP 189
>gi|308480880|ref|XP_003102646.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
gi|308261080|gb|EFP05033.1| hypothetical protein CRE_03259 [Caenorhabditis remanei]
Length = 358
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 20/214 (9%)
Query: 126 REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
R DTS HF+VFVGDLS +V++ L + F + S+A+V+ D +T +S+G+GFVSF N++
Sbjct: 126 RIDTSKHFHVFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQ 185
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA 245
+A++AI +NGKW+G R +R NWAA+ K S +++ + ++ N
Sbjct: 186 NAENAIAGMNGKWIGKRAVRTNWAAR-------KNSEENRDKLTF-------EQVFNSTK 231
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
+N T+VYVGN+S + T DL F G I +VRV + + + FVRY A
Sbjct: 232 ADN----TSVYVGNISQQTTETDLRESFST--YGDIAEVRVFKTQRYAFVRYDKKECATK 285
Query: 306 AIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP 339
AI N + L G ++CSWG P + PLP
Sbjct: 286 AIMEMNGKELTGNQVRCSWGRTQAVPSQALNPLP 319
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 26/194 (13%)
Query: 35 SGNLPP---RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----Y 87
S + PP R D S V+VG++ V+N LL+ F G + K+I+ ++ Y
Sbjct: 117 SASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFQKYGEVSEAKVIRDAQTQKSKGY 176
Query: 88 GFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED-------------TSGHFN 134
GFV + ++++A AI +NG+ I + ++ NWA + E+ + + +
Sbjct: 177 GFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTS 236
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG++S + T+ L FS + ++ RV Q+ + FV + +E A AI ++
Sbjct: 237 VYVGNISQQTTETDLRESFSTYGDIAEVRVFKTQR------YAFVRYDKKECATKAIMEM 290
Query: 195 NGKWLGNRQIRCNW 208
NGK L Q+RC+W
Sbjct: 291 NGKELTGNQVRCSW 304
>gi|392927018|ref|NP_509705.3| Protein TIAR-3 [Caenorhabditis elegans]
gi|211970450|emb|CAB01717.3| Protein TIAR-3 [Caenorhabditis elegans]
Length = 450
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 20/214 (9%)
Query: 126 REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
R DTS HF+VFVGDLS +V++ L + F+ F S+A+V+ D +T +S+G+GFVSF N++
Sbjct: 218 RIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 277
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA 245
+A++AI +NGKW+G R +R NWAA+ K S +++ + ++ N
Sbjct: 278 NAENAIAGMNGKWIGKRAVRTNWAAR-------KNSEENRDKLTF-------EQVFNSTK 323
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
+N T+VYVGN+S + T DL F G I +VR+ + + + FVRY A
Sbjct: 324 ADN----TSVYVGNISQQTTDADLRDLFST--YGDIAEVRIFKTQRYAFVRYEKKECATK 377
Query: 306 AIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP 339
AI N + + G ++CSWG P + PLP
Sbjct: 378 AIMEMNGKEMAGNQVRCSWGRTQAVPNQALNPLP 411
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 26/194 (13%)
Query: 35 SGNLPP---RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSY 87
S + PP R D S V+VG++ V+N LL+ F+ G + K+I+ + Y
Sbjct: 209 SASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGY 268
Query: 88 GFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED-------------TSGHFN 134
GFV + ++++A AI +NG+ I + ++ NWA + E+ + + +
Sbjct: 269 GFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTS 328
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG++S + TDA L FS + ++ R+ Q+ + FV + +E A AI ++
Sbjct: 329 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQR------YAFVRYEKKECATKAIMEM 382
Query: 195 NGKWLGNRQIRCNW 208
NGK + Q+RC+W
Sbjct: 383 NGKEMAGNQVRCSW 396
>gi|241953527|ref|XP_002419485.1| poly uridylate-binding protein, putative; poly(A)+ RNA-binding
protein, putative [Candida dubliniensis CD36]
gi|223642825|emb|CAX43080.1| poly uridylate-binding protein, putative [Candida dubliniensis
CD36]
Length = 497
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 109/172 (63%), Gaps = 9/172 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTG-PLEGCKLIK-KDKS--SYGFVDYFDRRSAALAIV 103
+ +YVGN+ + ++QE+FS G P++ K++ K+K+ +Y F++Y +A +A+
Sbjct: 70 KILYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDKNKAGFNYAFIEYDTNEAADMALN 129
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFACFSVFPT 158
TLNGR + IKVNWA+ S+ + FN+FVGDLSPEV D L FS F +
Sbjct: 130 TLNGRLVDNVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFES 189
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F NQ DA+ A+ +NG+WL R IRCNWA+
Sbjct: 190 LKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 241
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 31/215 (14%)
Query: 116 KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VN A A + S ++VG+L ++ + FSV + + K
Sbjct: 54 QVNAASAKEGGREVSNKI-LYVGNLPKSASEEMIQELFSVDGNPVKTIKVLNDKNKAGFN 112
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+ F+ + E A A+N LNG+ + N +I+ NWA + A +++
Sbjct: 113 YAFIEYDTNEAADMALNTLNGRLVDNVEIKVNWAFQSAAIAGNPNNTEE----------- 161
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL----CVGTIEDVRVQRDKG 291
P + ++VG+LS EV L F + D++ R +G
Sbjct: 162 --------------PLFN-IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRG 206
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
+GFV + +A LA+Q N LCG+ I+C+W S
Sbjct: 207 YGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 241
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ +L G I D + ++G FV+Y TH AALAI
Sbjct: 399 TTVYLGNIAHFTQQQELIPLLQNF--GFIVDFKFHPERGCAFVKYDTHERAALAIIQLAG 456
Query: 313 RILCGKPIKCSWGSKPTPPGTSSTP 337
L G+P+KC WG K PP + P
Sbjct: 457 FNLNGRPLKCGWG-KERPPQFQNFP 480
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
+++VG++ P+V + L+ FS L+ ++ ++S YGFV + ++ A LA+ T
Sbjct: 165 NIFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQT 224
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFN 134
+NG + G+ I+ NW AS +++ H+N
Sbjct: 225 MNGEWLCGRAIRCNW--ASHKQQQQQQHYN 252
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 130/221 (58%), Gaps = 12/221 (5%)
Query: 115 IKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR 172
+K NW+ A S + DT+ HF++FVGDLS +V L F+ F SD RV+ D +T +
Sbjct: 28 MKGNWSNSPAGSTKPDTNKHFHIFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQK 87
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK--GATSGDEKQSSDSKSVVEL 230
S+G+GFVSF ++DA++AIN +NG+WLG R IR NWA + + + ++++ S S +
Sbjct: 88 SKGYGFVSFLRKQDAETAINAMNGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKY 147
Query: 231 TNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK 290
T D E N+ +P N TVY G L ++ + + F + G I+++RV +DK
Sbjct: 148 TPLTFD--EVYNQASPTN----CTVYCGGLGQGLSEELIQKTFSSY--GIIQEIRVFKDK 199
Query: 291 GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
G+ FVR++T A AI + + G+ +KCSWG + + P
Sbjct: 200 GYAFVRFATKESATHAIVAVHNTDVNGQIVKCSWGKESSDP 240
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 93/201 (46%), Gaps = 37/201 (18%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTL 105
++VG++ V L+E F+ G + C++++ + YGFV + ++ A AI +
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 106 NGRHIFGQPIKVNWAY------ASSQREDTSGH-------------FN--------VFVG 138
NG+ + G+ I+ NWA A++Q+E + G+ +N V+ G
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 139 DLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKW 198
L +++ + FS + + RV D +G+ FV F +E A AI ++
Sbjct: 170 GLGQGLSEELIQKTFSSYGIIQEIRVFKD------KGYAFVRFATKESATHAIVAVHNTD 223
Query: 199 LGNRQIRCNWAAKGATSGDEK 219
+ + ++C+W + + +++
Sbjct: 224 VNGQIVKCSWGKESSDPNNQQ 244
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
+ P+ P+ + + + C +VY G + ++ L+Q+ FSS G ++ ++ KDK
Sbjct: 143 STPKYTPLTFDEVYNQASPTNC-TVYCGGLGQGLSEELIQKTFSSYGIIQEIRVF-KDK- 199
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASS 124
Y FV + + SA AIV ++ + GQ +K +W SS
Sbjct: 200 GYAFVRFATKESATHAIVAVHNTDVNGQIVKCSWGKESS 238
>gi|406606542|emb|CCH42041.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
[Wickerhamomyces ciferrii]
Length = 482
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAI 102
+ + +YVG + ++ L+E+FS G ++ K++ K +Y F+++ + +A+ A
Sbjct: 100 SNKILYVGGLDKTISEDQLREIFSQHGEIDNVKILFDKNKQNFNYAFIEFQNELNASNAF 159
Query: 103 VTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + + I +NWAY S Q +++S HFN+FVGDLS E+ D L A F+ + + A
Sbjct: 160 QELNNKTLQNSVISINWAYQSQQAKNSSEHFNIFVGDLSTEIDDEQLKAAFNEYKSLVQA 219
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
VMWD ++GRSRG+GFVSF NQ+DA+ A+ G +GNRQ+R NWA+
Sbjct: 220 HVMWDMQSGRSRGYGFVSFTNQQDAELALTTKQGSQIGNRQVRLNWAS 267
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 36/196 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L +++ L FS + ++++D K ++ + F+ F+N+ +A +A +L
Sbjct: 104 LYVGGLDKTISEDQLREIFSQHGEIDNVKILFD-KNKQNFNYAFIEFQNELNASNAFQEL 162
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N K L N I NWA QS +K N+ ++
Sbjct: 163 NNKTLQNSVISINWAY---------QSQQAK----------------------NSSEHFN 191
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+LS+E+ L F+ + + D++ R +G+GFV ++ +A LA+
Sbjct: 192 IFVGDLSTEIDDEQLKAAFNEYKSLVQAHVMWDMQSGRSRGYGFVSFTNQQDAELALTTK 251
Query: 311 NARILCGKPIKCSWGS 326
+ + ++ +W S
Sbjct: 252 QGSQIGNRQVRLNWAS 267
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GNL+ T DL G I D++ ++K F++Y +H AALAI +
Sbjct: 391 TTVYLGNLTPYTTQNDLIPLVQNF--GYIVDLKFHQEKNCAFIKYDSHERAALAIVQLSG 448
Query: 313 RILCGKPIKCSWG 325
I+ G+P+K WG
Sbjct: 449 LIINGRPLKTGWG 461
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
P++ I S +L R S +VY+GN+ P T L + + G + K +
Sbjct: 365 PTVATGLNIVSPQSYDLVLRKTPSWLTTVYLGNLTPYTTQNDLIPLVQNFGYIVDLKFHQ 424
Query: 82 KDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
+ + F+ Y AALAIV L+G I G+P+K W
Sbjct: 425 EKNCA--FIKYDSHERAALAIVQLSGLIINGRPLKTGWG 461
>gi|242042043|ref|XP_002468416.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
gi|241922270|gb|EER95414.1| hypothetical protein SORBIDRAFT_01g045570 [Sorghum bicolor]
Length = 415
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 157/293 (53%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG ++ K+I+ +S YGF+++ +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +P
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYP 133
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A ++G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S +K+V T + + P+++P TT+++GNL VT +L + +C
Sbjct: 194 QLQYSAAKAVYPAT---AYAMPQLQAVLPDSDPTNTTIFIGNLDPNVTEDELRQ----IC 246
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ KG GFV+Y++ A A+Q + ++ + ++ SWG P
Sbjct: 247 VQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSP 299
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 89/210 (42%), Gaps = 39/210 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R D + S++VG++ P VT+ LLQE F P + G K++ + YGFV + D
Sbjct: 101 RPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYPSVRGAKVVTDPNTGRSKGYGFVKFADE 160
Query: 96 RSAALAIVTLNGRHIFGQPIKVN-----------------------WAYASSQR-----E 127
A+ +NG + +P++++ AYA Q +
Sbjct: 161 NEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPD 220
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L P VT+ L C + K +G GFV + ++ A
Sbjct: 221 SDPTNTTIFIGNLDPNVTEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASA 274
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+ L+G +G + +R +W A+ D
Sbjct: 275 EEAVQRLHGTMIGQQAVRLSWGRSPASKQD 304
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
Y + A PQ++ +L + P T ++++GN+ P VT L+++ G L K+
Sbjct: 204 YPATAYAMPQLQAVLPDSDP------TNTTIFIGNLDPNVTEDELRQICVQFGELIYVKI 257
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 258 PVGKGC--GFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDPS 306
>gi|341903554|gb|EGT59489.1| CBN-TIAR-3 protein [Caenorhabditis brenneri]
Length = 417
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 121/214 (56%), Gaps = 20/214 (9%)
Query: 126 REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
R DTS HF+VFVGDLS +V++ L + F + S+A+V+ D +T +S+G+GFVSF N++
Sbjct: 185 RIDTSKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGYGFVSFPNKQ 244
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA 245
+A++AI +NGKW+G R +R NWAA+ K S +++ + ++ N
Sbjct: 245 NAENAIAGMNGKWIGKRAVRTNWAAR-------KNSEENRDKLTF-------EQVFNSTK 290
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
+N T+VYVGN+S + T DL F G I +VRV + + + FVRY A
Sbjct: 291 ADN----TSVYVGNISQQTTDADLRDSFST--YGDIAEVRVFKTQRYAFVRYDKKECATK 344
Query: 306 AIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLP 339
AI N + + G ++CSWG P + PLP
Sbjct: 345 AIMEMNGKEMAGNQVRCSWGRTQAVPNQALNPLP 378
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 99/194 (51%), Gaps = 26/194 (13%)
Query: 35 SGNLPP---RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----Y 87
S + PP R D S V+VG++ V+N LL+ F G + K+I+ ++ Y
Sbjct: 176 SASEPPMEMRIDTSKHFHVFVGDLSKDVSNDLLKSTFQKYGEVSEAKVIRDAQTQKSKGY 235
Query: 88 GFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRED-------------TSGHFN 134
GFV + ++++A AI +NG+ I + ++ NWA + E+ + + +
Sbjct: 236 GFVSFPNKQNAENAIAGMNGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTS 295
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG++S + TDA L FS + ++ RV Q+ + FV + +E A AI ++
Sbjct: 296 VYVGNISQQTTDADLRDSFSTYGDIAEVRVFKTQR------YAFVRYDKKECATKAIMEM 349
Query: 195 NGKWLGNRQIRCNW 208
NGK + Q+RC+W
Sbjct: 350 NGKEMAGNQVRCSW 363
>gi|365983576|ref|XP_003668621.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
gi|343767388|emb|CCD23378.1| hypothetical protein NDAI_0B03440 [Naumovozyma dairenensis CBS 421]
Length = 499
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/170 (41%), Positives = 105/170 (61%), Gaps = 3/170 (1%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALA 101
++ R +YVGN+ + LL++ F G + K++ K +Y FV+Y A +A
Sbjct: 84 TSDRVLYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKNQNVNYAFVEYLKSHDANVA 143
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG I + IK+NWA+ S Q +++ FN+FVGDL+ +V D TL + F FP+
Sbjct: 144 LQTLNGIQIENKIIKINWAFQSQQNLNSNDTFNLFVGDLNIDVDDETLSSNFKNFPSYIQ 203
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
A VMWD +T RSRG+GFVSF +++ AQ+A++ + GK + R IR NWA K
Sbjct: 204 AHVMWDMQTSRSRGYGFVSFADRDQAQNAMDTMQGKEINGRPIRINWATK 253
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 36/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L + + L F V +D ++M D+K ++ + FV + DA A+ L
Sbjct: 89 LYVGNLDKSINEDLLKQYFQVGGQITDVKIMVDKKN-QNVNYAFVEYLKSHDANVALQTL 147
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG + N+ I+ NWA + +Q+ +S L
Sbjct: 148 NGIQIENKIIKINWAFQS------QQNLNSNDTFNL------------------------ 177
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
+VG+L+ +V L +F + + D++ R +G+GFV ++ +A A+
Sbjct: 178 -FVGDLNIDVDDETLSSNFKNFPSYIQAHVMWDMQTSRSRGYGFVSFADRDQAQNAMDTM 236
Query: 311 NARILCGKPIKCSWGSK 327
+ + G+PI+ +W +K
Sbjct: 237 QGKEINGRPIRINWATK 253
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRS 97
+++ +++VG+++ V + L F + ++ ++S YGFV + DR
Sbjct: 169 LNSNDTFNLFVGDLNIDVDDETLSSNFKNFPSYIQAHVMWDMQTSRSRGYGFVSFADRDQ 228
Query: 98 AALAIVTLNGRHIFGQPIKVNWA 120
A A+ T+ G+ I G+PI++NWA
Sbjct: 229 AQNAMDTMQGKEINGRPIRINWA 251
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL G I D +KG F++Y TH +AA+ I
Sbjct: 363 PRVTTAYIGNIPHFATEADLIPLLQTF--GFILDFSHYPEKGCCFIKYDTHEQAAVCIVA 420
Query: 310 GNARILCGKPIKCSWGSKPT 329
G+ ++ WG + T
Sbjct: 421 LANFPFQGRNLRTGWGKERT 440
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK-----GFGFVRYSTHPEAALAIQ 308
+YVGNL + L ++F G I DV++ DK + FV Y +A +A+Q
Sbjct: 88 VLYVGNLDKSINEDLLKQYFQ--VGGQITDVKIMVDKKNQNVNYAFVEYLKSHDANVALQ 145
Query: 309 MGNARILCGKPIKCSWG 325
N + K IK +W
Sbjct: 146 TLNGIQIENKIIKINWA 162
>gi|403213707|emb|CCK68209.1| hypothetical protein KNAG_0A05440 [Kazachstania naganishii CBS
8797]
Length = 442
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 106/183 (57%), Gaps = 3/183 (1%)
Query: 32 PILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY---G 88
P++ N ++ R +YVGN+ +T +L++ F G + K++ KS+Y
Sbjct: 63 PVVPANATHGGRETSDRVLYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNYVNYA 122
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FV+Y A++A+ TLNG I +K+N A+ S Q FN+FVGDL+ ++ D T
Sbjct: 123 FVEYAKAHDASVALQTLNGIQIENNKVKINRAFQSQQSTTDDSTFNLFVGDLNIDIDDDT 182
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L F FP+ A VMWD +TGRSRG+GFVSF +QE AQ A+ ++ GK L R IR NW
Sbjct: 183 LSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEMQGKELNGRPIRINW 242
Query: 209 AAK 211
A K
Sbjct: 243 ATK 245
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 88/197 (44%), Gaps = 36/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V D +VM D+K+ + FV + DA A+ L
Sbjct: 81 LYVGNLDKSITEDILKQYFQVAGQIVDVKVMIDKKSNYV-NYAFVEYAKAHDASVALQTL 139
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG + N +++ N A + Q+ + +D+ N
Sbjct: 140 NGIQIENNKVKINRAFQS-------------------------QQSTTDDSTFN------ 168
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ ++ L R F + + D++ R +G+GFV ++ +A A++
Sbjct: 169 LFVGDLNIDIDDDTLSRSFKDFPSYIQAHVMWDMQTGRSRGYGFVSFADQEQAQKAMEEM 228
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+PI+ +W +K
Sbjct: 229 QGKELNGRPIRINWATK 245
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ +T Y+GN+ T DL + G I D +KG F++Y TH +AA+ I
Sbjct: 336 PRVSTAYIGNIPHFATEADLIPLLQSF--GFILDFTHYPEKGCCFIKYDTHEQAAVCIVA 393
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 394 LANFNFQGRNLRTGWGKE 411
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 152/299 (50%), Gaps = 17/299 (5%)
Query: 39 PPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFD 94
P + S ++++VG++H + + L FSS G + K+I+ ++ YGFV++
Sbjct: 75 PLKGSGSENKTIWVGDLHHWMDESYLHSCFSSVGEISSMKVIRNKQTGLSEGYGFVEFLS 134
Query: 95 RRSAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLF 150
+A + +G + Q ++NWA S+ +R D ++FVGDL+ +VTD+ L+
Sbjct: 135 HTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLY 194
Query: 151 ACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
FS FP+ A+V+ D TGRS+G+GFV F + + A+ ++NG + +R +R A
Sbjct: 195 ETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAA 254
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
+SG ++Q S S G + + A TT++VG L VT DL
Sbjct: 255 TPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGDSAN------TTIFVGGLDPNVTDEDL 308
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ F G I V++ KG GFV+++ +A A+Q N ++ + ++ SWG P
Sbjct: 309 RQPFSQY--GEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNGTVIGKQTVRLSWGRNP 365
>gi|323303187|gb|EGA56986.1| Pub1p [Saccharomyces cerevisiae FostersB]
Length = 433
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 73 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 132
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 133 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 191
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 192 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 241
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 78 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 136
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 137 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 164
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 165 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 224
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 225 QGQDLNGRPLRINWAAK 241
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 339 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 396
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 397 LANFPFQGRNLRTGWGKE 414
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 42 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 90
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 91 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 148
Query: 323 SW 324
+W
Sbjct: 149 NW 150
>gi|349580919|dbj|GAA26078.1| K7_Pub1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 453
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|323335711|gb|EGA76992.1| Pub1p [Saccharomyces cerevisiae Vin13]
Length = 453
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|6324312|ref|NP_014382.1| Pub1p [Saccharomyces cerevisiae S288c]
gi|308153665|sp|P32588.4|PUB1_YEAST RecName: Full=Nuclear and cytoplasmic polyadenylated RNA-binding
protein PUB1; AltName: Full=ARS consensus-binding
protein ACBP-60; AltName: Full=Poly uridylate-binding
protein; Short=Poly(U)-binding protein
gi|1301841|emb|CAA95877.1| PUB1 [Saccharomyces cerevisiae]
gi|285814634|tpg|DAA10528.1| TPA: Pub1p [Saccharomyces cerevisiae S288c]
gi|392296972|gb|EIW08073.1| Pub1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 453
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|295646|gb|AAC37348.1| RNA-binding protein [Saccharomyces cerevisiae]
gi|311124|gb|AAC37364.1| poly(A)-binding protein [Saccharomyces cerevisiae]
gi|151944515|gb|EDN62793.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|190409011|gb|EDV12276.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
gi|207341619|gb|EDZ69624.1| YNL016Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256274171|gb|EEU09080.1| Pub1p [Saccharomyces cerevisiae JAY291]
gi|259148933|emb|CAY82177.1| Pub1p [Saccharomyces cerevisiae EC1118]
gi|323346726|gb|EGA81007.1| Pub1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352444|gb|EGA84945.1| Pub1p [Saccharomyces cerevisiae VL3]
Length = 453
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|365758602|gb|EHN00436.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 455
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 344 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 401
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 402 LANFPFQGRNLRTGWGKE 419
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
+T ++ Q SVV N I+ G+E S+ +YVGNL +T L ++
Sbjct: 46 STQVEDDQGESDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITEDILKQY 94
Query: 273 FHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
F G I ++++ DK + FV Y +A +A+Q N + + +K +W
Sbjct: 95 FQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW 149
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 131/226 (57%), Gaps = 24/226 (10%)
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N R + + +KVNWA Q++ DT+ HF+VFVGDLS EV + L F F SD
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
A+V+ D T +S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + GD+++
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--KPGDQEKP 118
Query: 222 S--DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
S + KS E+ N S T+VYVGN++S +T ++ + F + G
Sbjct: 119 SHYNEKSYDEIYNQTSGDN--------------TSVYVGNIAS-LTEDEIRQGFASF--G 161
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
I +VR+ + +G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 162 RITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 207
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 17 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 73
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 74 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 133
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ F ++ R+ + +G+ FV F N++ A
Sbjct: 134 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 186
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 187 KAIVQMNNQDVGGQLVRCSWGKTGDT 212
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 38/150 (25%)
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+N + L +R+++ NWA + GQ++S D ++
Sbjct: 1 MNKRLLLDREMKVNWA------------------------VEPGQQQSKIDTT----RHF 32
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAI 90
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
+ N + L + I+ +W ++ PG P
Sbjct: 91 EQMNGQWLGRRTIRTNWATR--KPGDQEKP 118
>gi|401838326|gb|EJT42016.1| PUB1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 459
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTMQGQDLNGRPLRINWAAK 240
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQTAMDTM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 344 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 401
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 402 LANFPFQGRNLRTGWGKE 419
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
+T ++ Q SVV N I+ G+E S+ +YVGNL +T L ++
Sbjct: 46 STQVEDDQGESDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITEDILKQY 94
Query: 273 FHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
F G I ++++ DK + FV Y +A +A+Q N + + +K +W
Sbjct: 95 FQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKINW 149
>gi|172438|gb|AAA02808.1| RNA-binding protein [Saccharomyces cerevisiae]
Length = 429
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|68478681|ref|XP_716609.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|238880985|gb|EEQ44623.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 510
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 107/172 (62%), Gaps = 9/172 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTG-PLEGCKLIK-KDKS--SYGFVDYFDRRSAALAIV 103
+ +YVGN+ + +QE+FS G P++ K++ K+K+ +Y F++Y A +A+
Sbjct: 79 KILYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFNYAFIEYDTNEVADMALN 138
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFACFSVFPT 158
TLNGR + IKVNWA+ S+ + FN+FVGDLSPEV D L FS F +
Sbjct: 139 TLNGRLVDDVEIKVNWAFQSAAIAGNPNNTEEPLFNIFVGDLSPEVNDEGLRNAFSKFES 198
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F NQ DA+ A+ +NG+WL R IRCNWA+
Sbjct: 199 LKQAHVMWDMQTSRSRGYGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 250
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 31/215 (14%)
Query: 116 KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
+VN A A + S ++VG+L ++ T+ FSV + + K
Sbjct: 63 QVNAASAKEGGREVSNKI-LYVGNLPKSASEETIQELFSVGGNPVKTIKILNDKNKAGFN 121
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+ F+ + E A A+N LNG+ + + +I+ NWA + A +++
Sbjct: 122 YAFIEYDTNEVADMALNTLNGRLVDDVEIKVNWAFQSAAIAGNPNNTEE----------- 170
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL----CVGTIEDVRVQRDKG 291
P + ++VG+LS EV L F + D++ R +G
Sbjct: 171 --------------PLFN-IFVGDLSPEVNDEGLRNAFSKFESLKQAHVMWDMQTSRSRG 215
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
+GFV + +A LA+Q N LCG+ I+C+W S
Sbjct: 216 YGFVTFGNQSDAELALQTMNGEWLCGRAIRCNWAS 250
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ +L G I D + ++G FV+Y TH AALAI
Sbjct: 412 TTVYLGNIAHFTQQQELIPLLQNF--GFIVDFKFHPERGCAFVKYDTHERAALAIIQLAG 469
Query: 313 RILCGKPIKCSWGSKPTPPGTSSTP 337
L G+P+KC WG K PP + P
Sbjct: 470 FNLNGRPLKCGWG-KERPPQFQNFP 493
>gi|365763380|gb|EHN04909.1| Pub1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 453
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 108/170 (63%), Gaps = 4/170 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALA 101
++ R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A
Sbjct: 72 TSDRVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIA 131
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ TLNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+
Sbjct: 132 LQTLNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
VMWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 191 GHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 240
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 77 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 135
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 136 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 163
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 164 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 223
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 224 QGQDLNGRPLRINWAAK 240
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P+ TT Y+GN+ T DL F G I D + +KG F++Y TH +AA+ I
Sbjct: 338 PRVTTAYIGNIPHFATEADLIPLFQNF--GFILDFKHYPEKGCCFIKYDTHEQAAVCIVA 395
Query: 310 GNARILCGKPIKCSWGSK 327
G+ ++ WG +
Sbjct: 396 LANFPFQGRNLRTGWGKE 413
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 213 ATSGDEKQSSDSK-----SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A G+ +Q+ D++ SVV N I+ G+E S+ +YVGNL +T
Sbjct: 41 AVEGNSEQAEDNQGENDPSVVP-ANAITGGRETSDR----------VLYVGNLDKAITED 89
Query: 268 DLHRHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L ++F G I ++++ DK + FV Y +A +A+Q N + + +K
Sbjct: 90 ILKQYFQ--VGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQTLNGKQIENNIVKI 147
Query: 323 SW 324
+W
Sbjct: 148 NW 149
>gi|295789540|pdb|3MD3|A Chain A, Crystal Structure Of The First Two Rrm Domains Of Yeast
Poly Binding Protein (Pub1)
Length = 166
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 106/167 (63%), Gaps = 4/167 (2%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKS-SYGFVDYFDRRSAALAIVT 104
R +YVGN+ +T +L++ F GP+ K++ K +K+ +Y FV+Y A +A+ T
Sbjct: 1 RVLYVGNLDKAITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQT 60
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LNG+ I +K+NWA+ SQ+ + FN+FVGDL+ V D TL F FP+ V
Sbjct: 61 LNGKQIENNIVKINWAF-QSQQSSSDDTFNLFVGDLNVNVDDETLRNAFKDFPSYLSGHV 119
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
MWD +TG SRG+GFVSF +Q+DAQ+A++ + G+ L R +R NWAAK
Sbjct: 120 MWDMQTGSSRGYGFVSFTSQDDAQNAMDSMQGQDLNGRPLRINWAAK 166
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+L +T+ L F V ++ ++M D K ++ + FV + DA A+ L
Sbjct: 3 LYVGNLDKAITEDILKQYFQVGGPIANIKIMID-KNNKNVNYAFVEYHQSHDANIALQTL 61
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + N ++ NWA + Q+ S++D
Sbjct: 62 NGKQIENNIVKINWAFQS-------------------------QQSSSDDT-------FN 89
Query: 255 VYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ V L F L + D++ +G+GFV +++ +A A+
Sbjct: 90 LFVGDLNVNVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDSM 149
Query: 311 NARILCGKPIKCSWGSK 327
+ L G+P++ +W +K
Sbjct: 150 QGQDLNGRPLRINWAAK 166
>gi|410083501|ref|XP_003959328.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
gi|372465919|emb|CCF60193.1| hypothetical protein KAFR_0J01260 [Kazachstania africana CBS 2517]
Length = 365
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 159/331 (48%), Gaps = 27/331 (8%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
PS P +E ++ + ++ + +Y+GN+ + L++ F G + K++
Sbjct: 5 QPSETVVP-VENVIPASAKEGGRETSDKVLYIGNLDKSINEDALKQYFQVAGQIVDVKVM 63
Query: 81 ---KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
K + +Y F++Y A +A+ TLNG I + IK+NWA+ S + FN+F+
Sbjct: 64 VDKKNNHVNYAFIEYSTNHDANVALQTLNGIQIENKNIKINWAFQSQTNLNDDTSFNLFI 123
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
GDL+ V D TL F P A VMWD +T RSRG+GFVSF E+AQ+A++ + G
Sbjct: 124 GDLNVNVDDTTLANAFKSCPGFLQAHVMWDMQTSRSRGYGFVSFDTHENAQAAMDQMQGH 183
Query: 198 WLGNRQIRCNWAAK--GATSGDEKQSSDSKSVVELTNG-ISDGQEKS------------- 241
+ R IR NWA K + ++++ + ++ N + +GQ+
Sbjct: 184 EINGRAIRINWATKRENMNNNSNNNTNNNNNNNQVRNRMMMEGQQNMPPPPPPMGSLPPV 243
Query: 242 NEDAPENN-----PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
N A E+ P+ TT Y+GN+ T DL G I D +KG F++
Sbjct: 244 NPQAVEDMIRRAPPRVTTAYIGNIPHFATEPDLIPLLQNF--GFILDFTHYPEKGCCFIK 301
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
Y TH +AA+ I + G+ ++ WG +
Sbjct: 302 YDTHEQAAVCIVALSNFQFQGRNLRTGWGKE 332
>gi|296085190|emb|CBI28685.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/100 (71%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPP 342
VRVQRD GFGFVRY+TH E +LAI MGN + ILCGKPI CSWGSKPTPPGTSS PL
Sbjct: 38 VRVQRDGGFGFVRYNTHIETSLAIWMGNTQSILCGKPIMCSWGSKPTPPGTSSNPLLLSA 97
Query: 343 APHLPGFSATDLAAYERQIALSKIAGAQALMHPQAQHALK 382
A LP SATDL AYERQ+A+SK+ G ALMHPQ QH K
Sbjct: 98 AAPLPSLSATDLRAYERQLAMSKMGGVHALMHPQGQHPFK 137
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 154/298 (51%), Gaps = 21/298 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++H + L F+ TG + K+I+ ++ YGFV+++ R A +
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 103 VTLNGRHI--FGQPIKVNWAYASS-------QREDTSGHFNVFVGDLSPEVTDATLFACF 153
NG + Q ++NWA S+ + + + +VFVGDL+ +VTDA L F
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 154 -SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
S F + A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 213 ATSGDEKQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
T G+ +Q S V+ G S+G + S + NN TT++VG L S+++ DL
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNN---TTIFVGGLDSDISDEDLR 351
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ F L G + V++ KG GFV+ + A AIQ N ++ + ++ SWG P
Sbjct: 352 QPF--LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSP 407
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 154/298 (51%), Gaps = 21/298 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++H + L F+ TG + K+I+ ++ YGFV+++ R A +
Sbjct: 115 IRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAEKVL 174
Query: 103 VTLNGRHI--FGQPIKVNWAYASS-------QREDTSGHFNVFVGDLSPEVTDATLFACF 153
NG + Q ++NWA S+ + + + +VFVGDL+ +VTDA L F
Sbjct: 175 QNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQETF 234
Query: 154 -SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
S F + A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A
Sbjct: 235 ASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVATPK 294
Query: 213 ATSGDEKQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
T G+ +Q S V+ G S+G + S + NN TT++VG L S+++ DL
Sbjct: 295 KTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNN---TTIFVGGLDSDISDEDLR 351
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ F L G + V++ KG GFV+ + A AIQ N ++ + ++ SWG P
Sbjct: 352 QPF--LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQGLNGTVIGKQTVRLSWGRSP 407
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 35/337 (10%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ H + Q Q YH PQ + S ++ ++V+VG++H +
Sbjct: 41 MQHHMMPPQHYAPPQPYMAYHQYQQQVPQAHHLGS--------SAENKTVWVGDLHHWMD 92
Query: 61 NALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQP 114
L F+STG + K+I+ ++ YGFV+++ +A + G + QP
Sbjct: 93 ENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMPNTEQP 152
Query: 115 IKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPTCSDARVMWDQKTG 171
++NWA S+ +R D ++FVGDL+ +VTD+ L F+ +P+ A+V++D TG
Sbjct: 153 FRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTG 212
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELT 231
RS+G+GFV F + + A+ ++NG + +R +R A TSG ++ S +
Sbjct: 213 RSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQ--------S 264
Query: 232 NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG 291
NG S E + + TT++VG L VT+ DL + F G I V++ KG
Sbjct: 265 NGTSSQSEADSTN--------TTIFVGGLDPNVTAEDLKQPFSQY--GEIVSVKIPVGKG 314
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
GFV+++ A A+Q N + + ++ SWG P
Sbjct: 315 CGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRSP 351
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST +++VG + P VT L++ FS G + K+ GFV + +R +A A+
Sbjct: 275 STNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGC--GFVQFANRNNAEEALQK 332
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
LNG I Q ++++W + + ++ + N + G
Sbjct: 333 LNGTTIGKQMVRLSWGRSPANKQFRADFGNAWSG 366
>gi|218192181|gb|EEC74608.1| hypothetical protein OsI_10216 [Oryza sativa Indica Group]
Length = 416
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG L+ K+I+ +S YGF+++ A +
Sbjct: 15 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 74
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +P
Sbjct: 75 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 134
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A T+G
Sbjct: 135 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 194
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q +K++ G + Q + P+++P TT+++GNL VT +L + +C
Sbjct: 195 QLQYGAAKAMYPAA-GYAVPQVQPV--LPDSDPTNTTIFIGNLDQNVTEDELRQ----IC 247
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ +K GFV+Y++ A A+Q + + + ++ SWG P
Sbjct: 248 VQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSP 300
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P ++G K++ + YGFV + D
Sbjct: 102 RPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADE 161
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------YASSQR-----E 127
A+ +NG + +P++++ A YA Q +
Sbjct: 162 NEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPD 221
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L VT+ L C + K ++ GFV + ++ A
Sbjct: 222 SDPTNTTIFIGNLDQNVTEDELRQI------CVQFGELIYVKIPANKACGFVQYASRASA 275
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+ A+ L+G +G + +R +W A+ D+
Sbjct: 276 EEAVQRLHGTTIGQQVVRLSWGRSPASKQDQ 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
A PQ++P+L + P T ++++GN+ VT L+++ G L K I +K+
Sbjct: 211 AVPQVQPVLPDSDP------TNTTIFIGNLDQNVTEDELRQICVQFGELIYVK-IPANKA 263
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 264 C-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 308
>gi|328715702|ref|XP_003245699.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 2
[Acyrthosiphon pisum]
gi|328715706|ref|XP_003245700.1| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 3
[Acyrthosiphon pisum]
Length = 420
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 16/204 (7%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ S H ++FVGDLSPE+ TL F+ F SD RV+ D +T +S+G+GFVSF + +A
Sbjct: 57 NKSEHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEA 116
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+SAI +NG+WLG+R IR NWA + + K S++K + E N+ +P
Sbjct: 117 ESAIAAMNGQWLGSRSIRTNWATRKPPT--LKTDSNTKPLTF--------DEVYNQSSPT 166
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
N TVY G L+S +T + + F G I+++RV +DKG+ FVR++T A AI
Sbjct: 167 N----CTVYCGGLTSGLTDELVQKTFAPF--GNIQEIRVFKDKGYAFVRFATKESATHAI 220
Query: 308 QMGNARILCGKPIKCSWGSKPTPP 331
+ + G+P+KCSWG + P
Sbjct: 221 VAVHNSDINGQPVKCSWGKESGEP 244
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 110/252 (43%), Gaps = 44/252 (17%)
Query: 22 PSLLAAP-QIEP--ILSGNLPPRFDASTC-----------RSVYVGNIHPQVTNALLQEV 67
P +A P + EP ILS N PP+ A+ ++VG++ P++ L+E
Sbjct: 22 PIAIAQPSKFEPKYILSHNPPPQMTATAVVPQMTINKSEHHHIFVGDLSPEIETQTLREA 81
Query: 68 FSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA--- 120
F+ G + C++++ ++ YGFV + + A AI +NG+ + + I+ NWA
Sbjct: 82 FAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRK 141
Query: 121 --------------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
+ + + + V+ G L+ +TD + F+ F + RV
Sbjct: 142 PPTLKTDSNTKPLTFDEVYNQSSPTNCTVYCGGLTSGLTDELVQKTFAPFGNIQEIRVFK 201
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D +G+ FV F +E A AI ++ + + ++C+W G SG+ S ++
Sbjct: 202 D------KGYAFVRFATKESATHAIVAVHNSDINGQPVKCSW---GKESGEPIVSQNASQ 252
Query: 227 VVELTNGISDGQ 238
V +S Q
Sbjct: 253 VCSSQAALSSTQ 264
>gi|108706453|gb|ABF94248.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215694482|dbj|BAG89475.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 416
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG L+ K+I+ +S YGF+++ A +
Sbjct: 15 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 74
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +P
Sbjct: 75 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 134
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A T+G
Sbjct: 135 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 194
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q +K++ G + Q + P+++P TT+++GNL VT +L + +C
Sbjct: 195 QLQYGAAKAMYPAA-GYAVPQVQPV--LPDSDPTNTTIFIGNLDQNVTEDELRQ----IC 247
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ +K GFV+Y++ A A+Q + + + ++ SWG P
Sbjct: 248 VQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSP 300
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 39/211 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P ++G K++ + YGFV + D
Sbjct: 102 RPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYPSVKGAKVVTDPNTGRSKGYGFVKFADE 161
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------------YASSQR-----E 127
A+ +NG + +P++++ A YA Q +
Sbjct: 162 NEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGSQLQYGAAKAMYPAAGYAVPQVQPVLPD 221
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L VT+ L C + K ++ GFV + ++ A
Sbjct: 222 SDPTNTTIFIGNLDQNVTEDELRQI------CVQFGELIYVKIPANKACGFVQYASRASA 275
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+ A+ L+G +G + +R +W A+ D+
Sbjct: 276 EEAVQRLHGTTIGQQVVRLSWGRSPASKQDQ 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
A PQ++P+L + P T ++++GN+ VT L+++ G L K I +K+
Sbjct: 211 AVPQVQPVLPDSDP------TNTTIFIGNLDQNVTEDELRQICVQFGELIYVK-IPANKA 263
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 264 C-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 308
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 149/290 (51%), Gaps = 15/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L F+ TG + K+I+ + YGFV++ +A +
Sbjct: 19 VRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERIL 78
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G Q ++NWA +R D ++FVGDL+P+VTD L F V +P
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYP 138
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A T+
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISMATPKKTTSF 198
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q + K+ + Q S + N TT++VGNL T DL + F L
Sbjct: 199 QQQYAVPKAFYPAPAYTAPVQVVSADGDVTN----TTIFVGNLDPNATEEDLRQTF--LQ 252
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+G I V++ +G GFV+++T A AIQ ++ +P++ SWG K
Sbjct: 253 LGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGKK 302
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 38/203 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F P + G K++ + YGFV + D
Sbjct: 106 RPDAGPEHSIFVGDLAPDVTDYLLQETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADE 165
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------------------YASSQREDTSG 131
A+ +NG +P++++ A A Q G
Sbjct: 166 NERNRAMTEMNGVFCSTRPMRISMATPKKTTSFQQQYAVPKAFYPAPAYTAPVQVVSADG 225
Query: 132 HF---NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
+FVG+L P T+ L F + ++ RG GFV F + A+
Sbjct: 226 DVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIP------AGRGCGFVQFATRTSAE 279
Query: 189 SAINDLNGKWLGNRQIRCNWAAK 211
AI + G +G + +R +W K
Sbjct: 280 EAIQRMQGHVIGQQPVRISWGKK 302
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 150/290 (51%), Gaps = 15/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L F+ TG + K+I+ + YGFV++ +A +
Sbjct: 21 VRTLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERIL 80
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G Q ++NWA +R D ++FVGDLSP+VTD L F +P
Sbjct: 81 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLSPDVTDYLLQETFRANYP 140
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A T+
Sbjct: 141 SVRGAKVVTDPNTGRSKGYGFVKFGDENERNRAMTEMNGVFCSTRPMRISAATPKKTAAY 200
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q + +K++ L + Q ++ N TT++VGNL VT +L F L
Sbjct: 201 QQQYATAKAIYPLPAYTAPVQVVPADNDITN----TTIFVGNLDPNVTEEELRPIF--LQ 254
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I V++ +G GFV+++T A AIQ ++ +P++ SWG K
Sbjct: 255 FGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRISWGRK 304
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 91/207 (43%), Gaps = 38/207 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P + G K++ + YGFV + D
Sbjct: 108 RPDAGPEHSIFVGDLSPDVTDYLLQETFRANYPSVRGAKVVTDPNTGRSKGYGFVKFGDE 167
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YASSQ----------------RED 128
A+ +NG +P++++ A YA+++ ++
Sbjct: 168 NERNRAMTEMNGVFCSTRPMRISAATPKKTAAYQQQYATAKAIYPLPAYTAPVQVVPADN 227
Query: 129 TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
+ +FVG+L P VT+ L F F ++ RG GFV F + A+
Sbjct: 228 DITNTTIFVGNLDPNVTEEELRPIFLQFGEIVYVKIP------VGRGCGFVQFATRASAE 281
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGATS 215
AI + G +G + +R +W K A S
Sbjct: 282 EAIQRMQGHVIGQQPVRISWGRKQARS 308
>gi|115451047|ref|NP_001049124.1| Os03g0174100 [Oryza sativa Japonica Group]
gi|113547595|dbj|BAF11038.1| Os03g0174100, partial [Oryza sativa Japonica Group]
Length = 438
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG L+ K+I+ +S YGF+++ A +
Sbjct: 37 VRTLWIGDLQYWADENYLYNCFAHTGELQSVKIIRNKLTSLPEGYGFIEFISHEVAEKVL 96
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +P
Sbjct: 97 QTYNGTQMPGTEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVSYP 156
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A T+G
Sbjct: 157 SVKGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGMYCSTRPMRISAAIPKKTTGS 216
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q +K++ G + Q + P+++P TT+++GNL VT +L + +C
Sbjct: 217 QLQYGAAKAMYPAA-GYAVPQVQPV--LPDSDPTNTTIFIGNLDQNVTEDELRQ----IC 269
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ +K GFV+Y++ A A+Q + + + ++ SWG P
Sbjct: 270 VQFGELIYVKIPANKACGFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSP 322
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
A PQ++P+L + P T ++++GN+ VT L+++ G L K I +K+
Sbjct: 233 AVPQVQPVLPDSDP------TNTTIFIGNLDQNVTEDELRQICVQFGELIYVK-IPANKA 285
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 286 C-GFVQYASRASAEEAVQRLHGTTIGQQVVRLSWGRSPASKQDQSA 330
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 157/292 (53%), Gaps = 16/292 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
++++VG++ + A L FS TG + K+I+ ++ YGFV+++ R +A +
Sbjct: 64 AKTIWVGDLLHWMDEAYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSRAAAEKVL 123
Query: 103 VTLNGRHI--FGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPT 158
+ +G + QP ++NWA +A +R D ++FVGDL+ +VTD+ L F+ +P+
Sbjct: 124 QSYSGSMMPNTEQPFRLNWASFAGERRADPGSDLSIFVGDLAADVTDSMLQETFAGKYPS 183
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A S +
Sbjct: 184 VKGAKVVIDSNTGRSKGYGFVRFGDENEKTRAMMEMNGAFCSSRPMRIGVATPKKPSAYQ 243
Query: 219 KQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+Q S S+++V S+G + S D NN TT++VG + S+VT DL + F
Sbjct: 244 QQYS-SQALVLAGGHASNGAMAQGSQSDGDSNN---TTIFVGGIDSDVTDEDLRQPFSQF 299
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG FV+++ A A+Q N + + ++ SWG P
Sbjct: 300 --GEVVSVKIPVGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTP 349
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
S +++VG I VT+ L++ FS G + K+ + K FV + +R++A A+
Sbjct: 273 SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGK---GCAFVQFANRKNAEDALQ 329
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFN 134
+LNG I Q ++++W + ++ H N
Sbjct: 330 SLNGTTIGKQTVRLSWGRTPANKQWRGDHGN 360
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 159/299 (53%), Gaps = 20/299 (6%)
Query: 40 PRFDAST--CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYF 93
PR ST +++++G++ P + L F+ TG + K+I ++ YGFV++F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 94 DRRSAALAIVTLNGRHIFGQ--PIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATL 149
+A + NG + P ++NWA A+ +R DT ++FVGDL+ +VTDA L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 150 FACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
FS + + A+V+ D +GRS+G+GFV F ++ + A+ ++NG + +R +R
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRPMRIGV 269
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQ--EKSNEDAPENNPQYTTVYVGNLSSEVTS 266
A SG +Q S+++V L G +G + S D+ NN TT++VG L S+V+
Sbjct: 270 ATPKKASG-YQQGYASQALV-LAGGHPNGMAVQGSQSDSESNN---TTIFVGGLDSDVSD 324
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
DL + F G + V++ KG GFV+++ A AIQ N ++ + ++ SWG
Sbjct: 325 EDLKQAFSKF--GDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWG 381
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
S +++VG + V++ L++ FS G + K+ I K GFV + +R++A AI
Sbjct: 308 SNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGK---GCGFVQFANRKNAEDAIQ 364
Query: 104 TLNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W ++ ++
Sbjct: 365 GLNGTVIGKQTVRLSWGRSTGNKQ 388
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 18/210 (8%)
Query: 120 AYASSQRE--DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
A+A++Q + S H+++FVGDLSPE+ TL F+ F SD RV+ D +T +S+G+G
Sbjct: 45 AHATNQNASVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYG 104
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG 237
FVSF + +A+SAI +NG+WLG+R IR NWA + + + ++ + E+ N
Sbjct: 105 FVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYN----- 159
Query: 238 QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRY 297
+++P TVY G L++ +T + + F G+I+++RV +DKG+ F+R+
Sbjct: 160 ---------QSSPTNCTVYCGGLTNGLTEELMQKTFSPF--GSIQEIRVFKDKGYAFIRF 208
Query: 298 STHPEAALAIQMGNARILCGKPIKCSWGSK 327
ST A AI + + G+ +KCSWG +
Sbjct: 209 STKESATHAIVAVHNTDINGQTVKCSWGKE 238
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 13 QQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTG 72
QQQ L P + AAP I + N + S ++VG++ P++ L+E F+ G
Sbjct: 29 QQQKLEP--PKMQAAPTIAHATNQNA--SVNKSEHYHIFVGDLSPEIETQTLREAFAPFG 84
Query: 73 PLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------- 120
+ C++++ ++ YGFV + + A AI +NG+ + + I+ NWA
Sbjct: 85 EISDCRVVRDPQTMKSKGYGFVSFVKKAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPK 144
Query: 121 ---------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG 171
+ + + + V+ G L+ +T+ + FS F + + RV D
Sbjct: 145 SEANTKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEELMQKTFSPFGSIQEIRVFKD---- 200
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+G+ F+ F +E A AI ++ + + ++C+W G SGD
Sbjct: 201 --KGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSW---GKESGD 241
>gi|50308683|ref|XP_454345.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643480|emb|CAG99432.1| KLLA0E08779p [Kluyveromyces lactis]
Length = 475
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 104/167 (62%), Gaps = 4/167 (2%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVT 104
+ +YVGN+ + + LL++ F G + K+I S +Y FV+YF+ A +A T
Sbjct: 97 KILYVGNLPKSIDDDLLKQYFQIGGSISSVKIIPDKNSQECNYAFVEYFEPHDANVAYQT 156
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LNG+ + G+ +K+NWA+ SQ+ ++ FN+FVGDL+ +V DATL F FP+ A V
Sbjct: 157 LNGKEVEGKVLKINWAF-QSQQVNSDETFNLFVGDLNVDVDDATLAGTFKEFPSFIQAHV 215
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
MWD ++GRSRG+GFVSF Q+ AQ A+ G L R +R NWA+K
Sbjct: 216 MWDMQSGRSRGYGFVSFGEQDQAQVAMETKQGFELNGRALRINWASK 262
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 9/84 (10%)
Query: 250 PQYTTVYVGNL---SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
P+ TT Y+GN+ + E + L ++F G I D + +KG F++Y TH +AAL
Sbjct: 356 PRVTTAYIGNIPHFAQEHDLIPLLQNF-----GFIIDFKHYPEKGCCFIKYDTHEQAALC 410
Query: 307 IQMGNARILCGKPIKCSWG-SKPT 329
I G+ ++ WG KPT
Sbjct: 411 IVALTNFPFQGRNLRTGWGKEKPT 434
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 22/119 (18%)
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
K GDE+ DS + V T G G+EKS++ +YVGNL + L
Sbjct: 70 KQQEEGDEE--DDSAAPVLATQG---GREKSDK----------ILYVGNLPKSIDDDLLK 114
Query: 271 RHFHALCVGTIEDVRVQRDKG-----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
++F G+I V++ DK + FV Y +A +A Q N + + GK +K +W
Sbjct: 115 QYFQ--IGGSISSVKIIPDKNSQECNYAFVEYFEPHDANVAYQTLNGKEVEGKVLKINW 171
>gi|294884880|gb|ADF47448.1| TIA1-like protein, partial [Dugesia japonica]
Length = 284
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 147/299 (49%), Gaps = 31/299 (10%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAA 99
D R++YVGN+ +T+ LL +F + G GC +I+ + Y F++Y + +A+
Sbjct: 2 DIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDFSCQTNPYAFIEYTNHSAAS 61
Query: 100 LAIVTLNGRHIFGQPIKVNWAYA-----------SSQREDTSGHFNVFVGDLSPEVTDAT 148
LA+ ++G ++ IKVNW+ SS + D S +FVGD+ +V +A
Sbjct: 62 LALAAMDGIFMWNNQIKVNWSSGNSVNTVASSLPSSNKIDYSNTIQIFVGDIGLDVDEAM 121
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L FS F DA+V+ Q G+SRGF FV+F ++DA+ AI ++ W NR I+CNW
Sbjct: 122 LKEGFSEFGPVVDAKVVRYQD-GQSRGFAFVAFSKRDDAEKAIEKMHKTWFHNRTIKCNW 180
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
A + GD+ + E ++AP N T VY+ + +T
Sbjct: 181 ATRNGLDGDQFIKYTPRP-----------YELVYKEAPLTN---TNVYIAGIPEGLTEEL 226
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ HF G I+ V+V +K F+ + TH AA AI + + IKC+WG +
Sbjct: 227 IRVHFEEF--GRIDAVKVYPEKAHAFINFVTHESAARAISQRHGYKINDNVIKCNWGKE 283
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 28/220 (12%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D + ++VG+L +TD L F F C ++ D + ++ + F+ + N A
Sbjct: 2 DIRNNRTIYVGNLPDAITDHLLLRIFGNFGQCVGCHIIRDF-SCQTNPYAFIEYTNHSAA 60
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
A+ ++G ++ N QI+ NW++ G + S S + ++ +N I
Sbjct: 61 SLALAAMDGIFMWNNQIKVNWSS-GNSVNTVASSLPSSNKIDYSNTIQ------------ 107
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQR-----DKGFGFVRYSTHPE 302
++VG++ +V L F G + D +V R +GF FV +S +
Sbjct: 108 -------IFVGDIGLDVDEAMLKEGFSEF--GPVVDAKVVRYQDGQSRGFAFVAFSKRDD 158
Query: 303 AALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPP 342
A AI+ + + IKC+W ++ G P P
Sbjct: 159 AEKAIEKMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRP 198
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 28/200 (14%)
Query: 34 LSGNLPP--RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK-KDKSSYG-- 88
++ +LP + D S ++VG+I V A+L+E FS GP+ K+++ +D S G
Sbjct: 90 VASSLPSSNKIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFA 149
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSG 131
FV + R A AI ++ + IK NWA Y +E
Sbjct: 150 FVAFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRNGLDGDQFIKYTPRPYELVYKEAPLT 209
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
+ NV++ + +T+ + F F +V + F++F E A AI
Sbjct: 210 NTNVYIAGIPEGLTEELIRVHFEEFGRIDAVKVY------PEKAHAFINFVTHESAARAI 263
Query: 192 NDLNGKWLGNRQIRCNWAAK 211
+ +G + + I+CNW +
Sbjct: 264 SQRHGYKINDNVIKCNWGKE 283
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
H+++FVGDLSPE+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 53 HYHIFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAI 112
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + + + +S + E+ N +++P
Sbjct: 113 TAMNGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYN--------------QSSPT 158
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
TVY G L++ +T + + F GTI+++RV +DKG+ F+R+ST A AI +
Sbjct: 159 NCTVYCGGLTAGLTEELMQKTFQPF--GTIQEIRVFKDKGYAFIRFSTKESATHAIVAVH 216
Query: 312 ARILCGKPIKCSWGSKPTPPGTS 334
+ G P+KCSWG + P +
Sbjct: 217 NADVNGAPVKCSWGKESGDPNNA 239
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 30/199 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ P++ L++ F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 106 NGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVGDLSPEVTDAT 148
NG+ + + I+ NWA + + + + V+ G L+ +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
+ F F T + RV D +G+ F+ F +E A AI ++ + ++C+W
Sbjct: 176 MQKTFQPFGTIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNADVNGAPVKCSW 229
Query: 209 AAKGATSGDEKQSSDSKSV 227
G SGD + ++ +
Sbjct: 230 ---GKESGDPNNAQGAQVI 245
>gi|238005936|gb|ACR34003.1| unknown [Zea mays]
gi|414865083|tpg|DAA43640.1| TPA: RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG ++ K+I+ +S YGF+++ +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYS 133
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A ++G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S +K+V T + + P+++P TT+++GNL V +L + +C
Sbjct: 194 QLQYSAAKAVYPAT---AYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQ----IC 246
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ KG GFV+Y++ A A+Q + ++ + ++ SWG P
Sbjct: 247 VQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSP 299
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 39/210 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
R D + S++VG++ P VT+ LLQE F + + G K++ + YGFV + D
Sbjct: 101 RPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADE 160
Query: 96 RSAALAIVTLNGRHIFGQPIKVN-----------------------WAYASSQR-----E 127
A+ +NG + +P++++ AYA Q +
Sbjct: 161 NEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPD 220
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L P V + L C + K +G GFV + ++ A
Sbjct: 221 SDPTNTTIFIGNLDPNVIEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASA 274
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+ L+G +G + +R +W A+ D
Sbjct: 275 EEAVQRLHGTMIGQQAVRLSWGRSPASKQD 304
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
Y + A PQ++ +L + P T ++++GN+ P V L+++ G L K+
Sbjct: 204 YPATAYAMPQLQAVLPDSDP------TNTTIFIGNLDPNVIEDELRQICVQFGELIYVKI 257
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
GFV Y R SA A+ L+G I Q ++++W + + ++D+S
Sbjct: 258 PVGKGC--GFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSS 306
>gi|226506980|ref|NP_001152183.1| LOC100285821 [Zea mays]
gi|195653617|gb|ACG46276.1| RNA-binding post-transcriptional regulator csx1 [Zea mays]
Length = 415
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG ++ K+I+ +S YGF+++ +A +
Sbjct: 14 VRTLWIGDLQYWTDENYLYSCFAHTGEVQSVKIIRNKVTSLPEGYGFIEFVSHEAAEKIL 73
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +
Sbjct: 74 QTYNGTQMPGTEHTFRLNWASFSSGERRPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYS 133
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A ++G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFADENEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGS 193
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S +K+V T + + P+++P TT+++GNL V +L + +C
Sbjct: 194 QLQYSAAKAVYPAT---AYAMPQLQAVLPDSDPTNTTIFIGNLDPNVIEDELRQ----IC 246
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ KG GFV+Y++ A A+Q + ++ + ++ SWG P
Sbjct: 247 VQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSP 299
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 39/210 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
R D + S++VG++ P VT+ LLQE F + + G K++ + YGFV + D
Sbjct: 101 RPDPGSDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADE 160
Query: 96 RSAALAIVTLNGRHIFGQPIKVN-----------------------WAYASSQR-----E 127
A+ +NG + +P++++ AYA Q +
Sbjct: 161 NEKNRAMTEMNGVYCSTRPMRISAAIPKKSTGSQLQYSAAKAVYPATAYAMPQLQAVLPD 220
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L P V + L C + K +G GFV + ++ A
Sbjct: 221 SDPTNTTIFIGNLDPNVIEDELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASA 274
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+ L+G +G + +R +W A+ D
Sbjct: 275 EEAVQRLHGTMIGQQAVRLSWGRSPASKQD 304
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
Y + A PQ++ +L + P T ++++GN+ P V L+++ G L K+
Sbjct: 204 YPATAYAMPQLQAVLPDSDP------TNTTIFIGNLDPNVIEDELRQICVQFGELIYVKI 257
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
GFV Y R SA A+ L+G I Q ++++W + + ++D+S
Sbjct: 258 PVGKGC--GFVQYASRASAEEAVQRLHGTMIGQQAVRLSWGRSPASKQDSS 306
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 154/292 (52%), Gaps = 16/292 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
++V+VG++ + L FS TG + K+I+ ++ YGFV+++ +A +
Sbjct: 79 AKTVWVGDLLHWMDETYLHNCFSHTGEVSSVKIIRNKQTGQLEGYGFVEFYSHAAAEKVL 138
Query: 103 VTLNGRHI--FGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ +G + QP ++NWA +A +R D ++FVGDL+ +VTDA L F+ + +
Sbjct: 139 QSYSGSMMPNTDQPFRLNWASFAGERRADAGSDLSIFVGDLAADVTDAMLQETFATKYAS 198
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRS+G+GFV F ++ + AI ++NG + +R +R A S +
Sbjct: 199 VKGAKVVADSNTGRSKGYGFVRFGDENEKTRAITEMNGAYCSSRPMRIGVATPKKPSAYQ 258
Query: 219 KQSSDSKSVVELTNGISDGQ--EKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+Q S S+++V S+G + S D NN TT++VG + S+VT DL + F
Sbjct: 259 QQYS-SQALVLAGGHASNGTMAQGSQSDGDSNN---TTIFVGGIDSDVTDEDLRQPFSQF 314
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG FV+++ A A+Q N + + ++ SWG P
Sbjct: 315 --GEVVSVKMPTGKGCAFVQFANRKNAEDALQSLNGTTIGKQTVRLSWGRTP 364
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S +++VG I VT+ L++ FS G + K+ + FV + +R++A A+ +
Sbjct: 288 SNNTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGCA--FVQFANRKNAEDALQS 345
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
LNG I Q ++++W + ++ H N + G
Sbjct: 346 LNGTTIGKQTVRLSWGRTPANKQWRGDHGNQWHG 379
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 154/290 (53%), Gaps = 14/290 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ + + L FS G + K+I+ ++ YGFV++ +A +
Sbjct: 84 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+ NG + QP ++NWA S+ +R +T F++FVGDL+ +VTD L F S +P+
Sbjct: 144 SYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 203
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TG S+G+GFV F ++ + A+ ++NG + +R +R A S E
Sbjct: 204 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHE 263
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ SS + V L+ G + ++ + + TT++VG L SEVT +L + F+
Sbjct: 264 QYSSQA---VILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQF-- 318
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV++S A AIQ + I+ + ++ SWG P
Sbjct: 319 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSP 368
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 100/219 (45%), Gaps = 42/219 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R + + S++VG++ VT+ +L++ F+S P L+G K++ + YGFV + D
Sbjct: 170 RAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDE 229
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YAS-------SQRE 127
+ A+ +NG + + +++ A YAS SQ +
Sbjct: 230 SERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSD 289
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
S + +FVG L EVTD L F+ F ++ +G GFV F ++ A
Sbjct: 290 GDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIP------AGKGCGFVQFSDRSSA 343
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
Q AI L+G +G + +R +W G + +++ +DS S
Sbjct: 344 QEAIQKLSGAIIGKQAVRLSW---GRSPANKQMRTDSGS 379
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 154/290 (53%), Gaps = 22/290 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+V++G++H + L F+STG + K+I+ ++ YGFV+++ +A +
Sbjct: 109 RTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTHATAEKVLQ 168
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + QP ++NWA S+ +R D + ++FVGDL+ +VTD+ L F S +P+
Sbjct: 169 NYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPS 228
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + + A+ ++NG + +R +R A ++G +
Sbjct: 229 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAATPRKSTGYQ 288
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
Q ++NG S +++ D+ TT++VG L VT DL + F
Sbjct: 289 HQGG------YVSNGASGQAFQADGDSTN-----TTIFVGGLDPNVTDEDLKQPFSQY-- 335
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV++++ A A+Q N ++ + ++ SWG P
Sbjct: 336 GEIVSVKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNP 385
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 31/194 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D + S++VG++ VT++LL E F S P ++ K++ + YGFV + D
Sbjct: 195 RSDNAPDLSIFVGDLAADVTDSLLHETFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDD 254
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------YASS-------QREDTSGHFNV 135
A+ +NG + + +++ A Y S+ Q + S + +
Sbjct: 255 NERTQAMTEMNGVYCSSRAMRIGAATPRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTI 314
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVG L P VTD L FS + ++ +G GFV F ++ +A+ A+ LN
Sbjct: 315 FVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VGKGCGFVQFASRSNAEEALQKLN 368
Query: 196 GKWLGNRQIRCNWA 209
G +G + +R +W
Sbjct: 369 GTVIGKQTVRLSWG 382
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 117/200 (58%), Gaps = 16/200 (8%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ S H+++FVGDLSPE+ TL F+ F SD RV+ D +T +S+G+GFVSF + +A
Sbjct: 50 NKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEA 109
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+SAI +NG+WLG+R IR NWA + + + ++ + E+ N +
Sbjct: 110 ESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYN--------------Q 155
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
++P TVY G L++ +T + + F G+I+++RV +DKG+ F+R+ST A AI
Sbjct: 156 SSPTNCTVYCGGLTNGLTEELMQKTFSPF--GSIQEIRVFKDKGYAFIRFSTKESATHAI 213
Query: 308 QMGNARILCGKPIKCSWGSK 327
+ + G+ +KCSWG +
Sbjct: 214 VAVHNTDINGQTVKCSWGKE 233
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ P++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 106 NGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVGDLSPEVTDAT 148
NG+ + + I+ NWA + + + + V+ G L+ +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
+ FS F + + RV D +G+ F+ F +E A AI ++ + + ++C+W
Sbjct: 177 MQKTFSPFGSIQEIRVFKD------KGYAFIRFSTKESATHAIVAVHNTDINGQTVKCSW 230
Query: 209 AAKGATSGD 217
G SGD
Sbjct: 231 ---GKESGD 236
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G + +T L+Q+ FS G ++ ++ KDK Y F+ + + SA AIV ++
Sbjct: 162 TVYCGGLTNGLTEELMQKTFSPFGSIQEIRVF-KDK-GYAFIRFSTKESATHAIVAVHNT 219
Query: 109 HIFGQPIKVNWAYAS 123
I GQ +K +W S
Sbjct: 220 DINGQTVKCSWGKES 234
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 152/291 (52%), Gaps = 23/291 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G + K+I+ ++ YGF+++ + A +
Sbjct: 71 ARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFGNHALAEQVL 130
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
NG+ + QP K+NWA A +R D + +FVGDL+ +VTD L F S +P
Sbjct: 131 QNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYP 190
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ +G
Sbjct: 191 SVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLGPASNKKNTGG 250
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S ++ + T G ++ D+ NN TTV+VG L VT L + F
Sbjct: 251 QPQP--SSTIYQNTQG-------TDSDSDPNN---TTVFVGGLDPSVTDELLKQTFSPY- 297
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI+M N L G+ I+ SWG P
Sbjct: 298 -GELLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSP 347
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 32/230 (13%)
Query: 4 HRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNAL 63
H L +Q + Q P++ ++ SG R D + +++VG++ VT+ +
Sbjct: 123 HALAEQVLQNYNG--QMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFI 180
Query: 64 LQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVN 118
LQ+ F S P + D+++ YGFV + D A+ +NG++ +P+++
Sbjct: 181 LQDTFKSRYPSVKSAKVVFDRTTGRSKGYGFVKFADLDEQTRAMTEMNGQYCSSRPMRLG 240
Query: 119 WA----------------YASSQREDTSGHFN---VFVGDLSPEVTDATLFACFSVFPTC 159
A Y ++Q D+ N VFVG L P VTD L FS +
Sbjct: 241 PASNKKNTGGQPQPSSTIYQNTQGTDSDSDPNNTTVFVGGLDPSVTDELLKQTFSPYGEL 300
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
++ ++ G FV + N+ A+ AI LNG LG + IR +W
Sbjct: 301 LYVKIPVGKRCG------FVQYSNRASAEEAIRMLNGSQLGGQSIRLSWG 344
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 24/216 (11%)
Query: 115 IKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG 171
+KVNWA Q++ DT+ HF+VFVGDLS EV + L F F SDA+V+ D T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS--DSKSVVE 229
+S+G+GFVS+ +E+A+ AI +NG+WLG R IR NWA + GD+++ S + KS E
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATR--KPGDQEKPSHYNEKSYDE 118
Query: 230 LTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD 289
+ N S T+VYVGN++S +T ++ + F + G I +VR+ +
Sbjct: 119 IYNQTSGDN--------------TSVYVGNIAS-LTEDEIRQGFASF--GRITEVRIFKM 161
Query: 290 KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+G+ FV++ AA AI N + + G+ ++CSWG
Sbjct: 162 QGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 197
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 31/206 (15%)
Query: 30 IEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--- 86
+EP G + D + V+VG++ +V N L+E F G + K+I+ ++
Sbjct: 7 VEP---GQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSK 63
Query: 87 -YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN----------- 134
YGFV Y R A AI +NG+ + + I+ NWA ++ H+N
Sbjct: 64 GYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQT 123
Query: 135 ------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
V+VG+++ +T+ + F+ F ++ R+ + +G+ FV F N++ A
Sbjct: 124 SGDNTSVYVGNIAS-LTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAA 176
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGAT 214
AI +N + +G + +RC+W G T
Sbjct: 177 KAIVQMNNQDVGGQLVRCSWGKTGDT 202
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LSSEV + L F G + D +V RD KG+GFV Y EA AI+
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPF--GDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIE 81
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTP 337
N + L + I+ +W ++ PG P
Sbjct: 82 QMNGQWLGRRTIRTNWATR--KPGDQEKP 108
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 157/292 (53%), Gaps = 14/292 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R+V++G++H + L F+ TG + K+I+ ++ YGFV+++ R +A +
Sbjct: 99 IRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRGTAEKVL 158
Query: 103 VTLNGRHI--FGQPIKVNWA-YASSQRE--DTSGHFNVFVGDLSPEVTDATLFACFS-VF 156
NG + Q ++NWA +++ +R D + ++FVGDL+ +VTDA L F+ +
Sbjct: 159 QNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQDTFAGRY 218
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A T G
Sbjct: 219 SSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYG 278
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
++Q S S++VV L G S + E + TT++VG L S+ + DL + F L
Sbjct: 279 FQQQYS-SQAVV-LAGGHSANGAVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPF--L 334
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A AIQ N ++ + ++ SWG P
Sbjct: 335 QFGEVVSVKIPVGKGCGFVQFADRKNAEEAIQGLNGTVIGKQTVRLSWGRSP 386
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 150/291 (51%), Gaps = 15/291 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L F+ TG + K+I+ + YGFV++ +A +
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G Q ++NWA +R D ++FVGDL+P+VTD L F +P
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + R +R + A T G
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISAATPKKTIGV 198
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q S K++ + + D NN TT++VGNL +T +L + F L
Sbjct: 199 QQQYSLGKAMYPVP-AYTTSVPVLPADYDANN---TTIFVGNLDPNITEEELKQTF--LQ 252
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV++ T A AIQ +I+ + ++ SWG P
Sbjct: 253 FGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 303
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 38/209 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P + G K++ + YGFV + D
Sbjct: 106 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE 165
Query: 96 RSAALAIVTLNGRHIFGQPIKVNW-----------------------AYASS----QRED 128
A+ +NG + +P++++ AY +S +
Sbjct: 166 NERNRAMSEMNGVYCSTRPMRISAATPKKTIGVQQQYSLGKAMYPVPAYTTSVPVLPADY 225
Query: 129 TSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
+ + +FVG+L P +T+ L F F + ++ +G GFV F + A+
Sbjct: 226 DANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIP------AGKGCGFVQFGTRASAE 279
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGATSGD 217
AI + GK +G + +R +W A D
Sbjct: 280 EAIQKMQGKIIGQQVVRTSWGRNPAAKQD 308
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 38 LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRS 97
LP +DA+ +++VGN+ P +T L++ F G + K I K GFV + R S
Sbjct: 221 LPADYDANNT-TIFVGNLDPNITEEELKQTFLQFGEIAYVK-IPAGKGC-GFVQFGTRAS 277
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
A AI + G+ I Q ++ +W + ++D +
Sbjct: 278 AEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLT 310
>gi|268578407|ref|XP_002644186.1| Hypothetical protein CBG17168 [Caenorhabditis briggsae]
Length = 244
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 115/196 (58%), Gaps = 20/196 (10%)
Query: 130 SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQS 189
S HF+VFVGDLS +V++ L + F F S+A+V+ D +T +S+G+GFVSF N+++A++
Sbjct: 2 SEHFHVFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAEN 61
Query: 190 AINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN 249
AI+ +NGKW+G R +R NWAA+ K S +++ + ++ N +N
Sbjct: 62 AISGMNGKWIGKRAVRTNWAAR-------KNSEENRDKLTF-------EQVFNSTKADN- 106
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
T+VYVGN+S + T VDL F G I +VRV + + + FVRY A AI
Sbjct: 107 ---TSVYVGNISPQTTDVDLRDSFSTY--GDIAEVRVFKTQRYAFVRYEKKECATKAIME 161
Query: 310 GNARILCGKPIKCSWG 325
N + L G ++CSWG
Sbjct: 162 MNGKELAGNQVRCSWG 177
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 36/202 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTL 105
V+VG++ V+N LL+ F G + K+I+ ++ YGFV + ++++A AI +
Sbjct: 7 VFVGDLSKDVSNELLKSTFQKFGEVSEAKVIRDAQTQKSKGYGFVSFPNKQNAENAISGM 66
Query: 106 NGRHIFGQPIKVNWAYASSQRED-------------TSGHFNVFVGDLSPEVTDATLFAC 152
NG+ I + ++ NWA + E+ + + +V+VG++SP+ TD L
Sbjct: 67 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISPQTTDVDLRDS 126
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + ++ RV KT R + FV + +E A AI ++NGK L Q+RC+W
Sbjct: 127 FSTYGDIAEVRVF---KTQR---YAFVRYEKKECATKAIMEMNGKELAGNQVRCSWGR-- 178
Query: 213 ATSGDEKQSSDSKSVVELTNGI 234
+++V+E+ N I
Sbjct: 179 -----------TQAVIEIENHI 189
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
SVYVGNI PQ T+ L++ FS+ G + ++ K + Y FV Y + A AI+ +NG+
Sbjct: 108 SVYVGNISPQTTDVDLRDSFSTYGDIAEVRVFKTQR--YAFVRYEKKECATKAIMEMNGK 165
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSP 142
+ G ++ +W + E H VF DL P
Sbjct: 166 ELAGNQVRCSWGRTQAVIE-IENHIIVF-SDLQP 197
>gi|71005326|ref|XP_757329.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
gi|46096733|gb|EAK81966.1| hypothetical protein UM01182.1 [Ustilago maydis 521]
Length = 464
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 104/177 (58%), Gaps = 17/177 (9%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLN 106
V+V N+ T L+E+F S G ++ +++ + +YGFV+Y D SA AI T+N
Sbjct: 31 VHVANLPATTTERALREMFGSLGQMQSARVVASRSAGGLAYGFVEYVDVASAERAIRTMN 90
Query: 107 GRHIFGQPIKVNWAYASSQREDT-------------SG-HFNVFVGDLSPEVTDATLFAC 152
G FG PIKV WA S + SG H ++FVGDLSP+V DA L +
Sbjct: 91 GWVWFGTPIKVCWAKHSMHPDAVNEWVEVDRPVGMRSGVHSHLFVGDLSPDVDDALLQSF 150
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
FS F + +D RVM+D TG+SRGFGF++FR+++DA I G+WL RQIR NWA
Sbjct: 151 FSRFTSLADVRVMYDAATGKSRGFGFINFRSKQDADDCIATCQGQWLRGRQIRVNWA 207
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 82/204 (40%), Gaps = 28/204 (13%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V V +L T+ L F ARV+ + G +GFV + + A+ AI +
Sbjct: 31 VHVANLPATTTERALREMFGSLGQMQSARVVASRSAG-GLAYGFVEYVDVASAERAIRTM 89
Query: 195 NG-KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
NG W G I+ WA + + V + +G+ ++
Sbjct: 90 NGWVWFGT-PIKVCWAKHSMHPDAVNEWVEVDRPVGMRSGV-----------------HS 131
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
++VG+LS +V L F ++ DVRV D +GFGF+ + + +A I
Sbjct: 132 HLFVGDLSPDVDDALLQSFFSRFT--SLADVRVMYDAATGKSRGFGFINFRSKQDADDCI 189
Query: 308 QMGNARILCGKPIKCSWGSKPTPP 331
+ L G+ I+ +W ++ P
Sbjct: 190 ATCQGQWLRGRQIRVNWANQKNQP 213
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTL 105
++VG++ P V +ALLQ FS L +++ + +GF+++ ++ A I T
Sbjct: 133 LFVGDLSPDVDDALLQSFFSRFTSLADVRVMYDAATGKSRGFGFINFRSKQDADDCIATC 192
Query: 106 NGRHIFGQPIKVNWAYASSQ 125
G+ + G+ I+VNWA +Q
Sbjct: 193 QGQWLRGRQIRVNWANQKNQ 212
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
T+VYVGN+S + DL R F G + R+ +G+GFV +TH +AA AI
Sbjct: 316 TSVYVGNISPLTSQQDLVRIFSPFAHGHHLEARIPPGRGYGFVTLNTHEQAASAI 370
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 160/323 (49%), Gaps = 22/323 (6%)
Query: 17 LYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG 76
L+QY Q +P+ R ++++VG++ + L FS TG +
Sbjct: 83 LHQYGSYQQHQQQHKPL------DRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSS 136
Query: 77 CKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS--QRED 128
K+I+ +S YGF+++ R +A + +G + QP ++NWA S+ +R
Sbjct: 137 VKVIRNKLTSQSEGYGFIEFLSRAAAEEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAV 196
Query: 129 TSG-HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
+G ++FVGDLSP+VTDA L F +P+ A+V+ D TGRS+G+GFV F ++ +
Sbjct: 197 ENGPDLSIFVGDLSPDVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENE 256
Query: 187 AQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQ-EKSNEDA 245
A+ ++NG + NRQ+R A +++Q S ++ +G + S D
Sbjct: 257 RSRALTEMNGAYCSNRQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDG 316
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
N T++VG + ++VT DL + F G + V++ KG GFV+++ A
Sbjct: 317 ESTN---ATIFVGGIDADVTDEDLRQPFSQF--GEVVSVKIPVGKGCGFVQFAERKSAED 371
Query: 306 AIQMGNARILCGKPIKCSWGSKP 328
AI+ N ++ ++ SWG P
Sbjct: 372 AIETLNGTVIGKNTVRLSWGRSP 394
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 153/290 (52%), Gaps = 23/290 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F++TG + KLI+ ++ YGFV++ +A +
Sbjct: 90 VRTLWIGDLQYWMDENYIYSCFANTGEFQSVKLIRDKQTGQLQGYGFVEFASHAAAERVL 149
Query: 103 VTLNGRHIFGQPI--KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG+ + + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 150 QTFNGQMMPNVELAYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYMLQETFRVHYPSV 208
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G ++
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQE 268
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ V + N + G + +N+P TT++VG L VT L + F G
Sbjct: 269 R-------VPIPNTNTQGAQS------DNDPNNTTIFVGGLDPNVTEDALKQVFAPY--G 313
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV+Y+ P A A+Q+ ++ G+ ++ SWG P+
Sbjct: 314 EVVHVKIPVGKRCGFVQYANRPSAEQALQLLQGTLVGGQNVRLSWGRSPS 363
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 29/190 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRS 97
D + +++VG++ VT+ +LQE F P ++G K++ + YGFV + D
Sbjct: 176 DDTPDYTIFVGDLAADVTDYMLQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 235
Query: 98 AALAIVTLNGRHIFGQPIKV------------------NWAYASSQREDTSGHFNVFVGD 139
A A+ +NG +P+++ N +Q ++ + +FVG
Sbjct: 236 QARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPIPNTNTQGAQSDNDPNNTTIFVGG 295
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
L P VT+ L F+ + ++ ++ G FV + N+ A+ A+ L G +
Sbjct: 296 LDPNVTEDALKQVFAPYGEVVHVKIPVGKRCG------FVQYANRPSAEQALQLLQGTLV 349
Query: 200 GNRQIRCNWA 209
G + +R +W
Sbjct: 350 GGQNVRLSWG 359
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT L++VF+ G + K+ + GFV Y +R SA A+ L G
Sbjct: 290 TIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRC--GFVQYANRPSAEQALQLLQGT 347
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 348 LVGGQNVRLSWGRSPSNKQ 366
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 154/290 (53%), Gaps = 14/290 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ + + L FS G + K+I+ ++ YGFV++ +A +
Sbjct: 138 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 197
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+ NG + QP ++NWA S+ +R +T F++FVGDL+ +VTD L F S +P+
Sbjct: 198 SYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 257
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TG S+G+GFV F ++ + A+ ++NG + +R +R A S +
Sbjct: 258 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQ 317
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ SS + V L+ G + ++ + + TT++VG L S+VT +L + F+
Sbjct: 318 QYSSQA---VILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQF-- 372
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV++S A AIQ + I+ + ++ SWG P
Sbjct: 373 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSP 422
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 39/202 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R + + S++VG++ VT+ +L++ F+S P L+G K++ + YGFV + D
Sbjct: 224 RAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDE 283
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------------------YAS-------SQRE 127
+ A+ +NG + + +++ A YAS SQ +
Sbjct: 284 SERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQQYSSQAVILSGGYASNGAATHGSQSD 343
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ + +FVG L +VTD L F+ F ++ +G GFV F ++ A
Sbjct: 344 GDASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIP------AGKGCGFVQFSDRSSA 397
Query: 188 QSAINDLNGKWLGNRQIRCNWA 209
Q AI L+G +G + +R +W
Sbjct: 398 QEAIQKLSGAIIGKQAVRLSWG 419
>gi|432115353|gb|ELK36770.1| Nucleolysin TIAR [Myotis davidii]
Length = 284
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 130/242 (53%), Gaps = 43/242 (17%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVT 145
Y FV++++ R AA A+ +NGR I G+ +KVNWA SSQ++DTS
Sbjct: 28 YCFVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSSQKKDTS--------------- 72
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR
Sbjct: 73 -------------SKDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIR 119
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA + + Q +++K + ++ N+ +P+N TVY G ++S +T
Sbjct: 120 TNWATRKPPAPKSTQENNTKQL--------RFEDVVNQSSPKN----CTVYCGGIASGLT 167
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ + F G I ++RV +KG+ FVR+STH AA AI N + G +KC WG
Sbjct: 168 DQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWG 225
Query: 326 SK 327
+
Sbjct: 226 KE 227
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 156 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 213
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 214 TIEGHVVKCYWGKES 228
>gi|15239715|ref|NP_197436.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331115|sp|Q8VXZ9.1|R47BP_ARATH RecName: Full=Polyadenylate-binding protein RBP47B';
Short=Poly(A)-binding protein RBP47B'; AltName:
Full=RNA-binding protein 47B'; Short=AtRBP47B prime;
Short=AtRBP47B'
gi|18377731|gb|AAL67015.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|21281189|gb|AAM45052.1| putative DNA binding protein ACBF [Arabidopsis thaliana]
gi|332005306|gb|AED92689.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 425
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 12/291 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L FS TG L K+I+ + YGF+++ +A +
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 103 VTLNGRHIFGQPI--KVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
T NG + G + ++NWA + S Q+ D ++FVGDL+P+VTD L F V + +
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 142
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R + A G +
Sbjct: 143 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQ 202
Query: 219 KQSSDSKSVVELT-NGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+Q +K+V +T ++ PE++ TT+ V NL VT +L + F L
Sbjct: 203 QQYV-TKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQL- 260
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG+G+V++ T P A A+Q +++ + ++ SW P
Sbjct: 261 -GEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNP 310
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
+ DA S++VG++ P VT+ LLQE F + G K++ + YGFV + +
Sbjct: 109 KVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEE 168
Query: 96 RSAALAIVTLNGRHIFGQPIKVN--------------------------------WAYAS 123
A+ +NG + +P++++ AY +
Sbjct: 169 SERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVA 228
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
D + + V +L VT+ L FS V++ K ++G+G+V F+
Sbjct: 229 PPESDVTCT-TISVANLDQNVTEEELKKAFSQL-----GEVIY-VKIPATKGYGYVQFKT 281
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+ A+ + G+ +G + +R +W+ G
Sbjct: 282 RPSAEEAVQRMQGQVIGQQAVRISWSKNPGQDG 314
>gi|255718453|ref|XP_002555507.1| KLTH0G10912p [Lachancea thermotolerans]
gi|238936891|emb|CAR25070.1| KLTH0G10912p [Lachancea thermotolerans CBS 6340]
Length = 436
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 8/172 (4%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALA 101
++ R +YVGN+ VT +L++ F G + K++ +++Y FV++ A +A
Sbjct: 64 TSDRILYVGNLDLAVTEEMLKQYFQVGGSIANVKILMDKNNKQANYAFVEFHQPHDANVA 123
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
TL+G+ I IK+NWA+ S Q EDT FN+FVGDL+ +V D TL F PT
Sbjct: 124 FQTLDGKQIENHVIKINWAFQSQQVSSEDT---FNLFVGDLNVDVDDETLARTFKDIPTF 180
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
A VMWD +TGRSRG+GFVSF Q AQ A+ D G + R IR NWA+K
Sbjct: 181 IQAHVMWDMQTGRSRGYGFVSFGEQTQAQKAMEDNQGAVVNGRAIRINWASK 232
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 93/215 (43%), Gaps = 38/215 (17%)
Query: 117 VNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
V A AS +TS ++VG+L VT+ L F V + ++ +++ D K + +
Sbjct: 52 VTPANASRGGRETSDRI-LYVGNLDLAVTEEMLKQYFQVGGSIANVKILMD-KNNKQANY 109
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD 236
FV F DA A L+GK + N I+ NWA +
Sbjct: 110 AFVEFHQPHDANVAFQTLDGKQIENHVIKINWAFQS------------------------ 145
Query: 237 GQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV----GTIEDVRVQRDKGF 292
Q+ S+ED ++VG+L+ +V L R F + + D++ R +G+
Sbjct: 146 -QQVSSEDT-------FNLFVGDLNVDVDDETLARTFKDIPTFIQAHVMWDMQTGRSRGY 197
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GFV + +A A++ ++ G+ I+ +W SK
Sbjct: 198 GFVSFGEQTQAQKAMEDNQGAVVNGRAIRINWASK 232
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 155/301 (51%), Gaps = 22/301 (7%)
Query: 36 GNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVD 91
G P + R++++G++ + + F+ TG + K+I+ ++ YGF++
Sbjct: 54 GQPPQPANGDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQTGQSEGYGFIE 113
Query: 92 YFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATL 149
+ R +A + T NG + Q ++NWA A +R+D S + +FVGDL+ +VTD L
Sbjct: 114 FLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGDLAGDVTDYVL 173
Query: 150 FACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
F + + A+V+ D+ TGR++G+GFV F ++ + A+ ++NG +R +R
Sbjct: 174 QETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQIRAMTEMNGVHCSSRPMRIGP 233
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
AA TSG ++ SK+ + G + EN+P TT++VGNL S VT
Sbjct: 234 AANKNTSGSQQ---FSKTSYQNPPGTQN----------ENDPNNTTIFVGNLDSNVTDEH 280
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L + F G + V++ K GFV++S A A+++ N + G+ I+ SWG P
Sbjct: 281 LRQVFSQY--GELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGTPIGGQNIRLSWGRSP 338
Query: 329 T 329
+
Sbjct: 339 S 339
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 153/290 (52%), Gaps = 21/290 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++H + L F++TG L K+I+ ++ YGFV++F +A +
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 104 TLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPT 158
G + QP ++NWA S +R D ++FVGDL+ +V+D+ L F+ +P+
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F ++ + A+ ++NG + +R +R A +SG +
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 263
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+Q S +NG S +S+ D+ TT++VG L V+ DL + F
Sbjct: 264 QQYSSHGGYA--SNGAS---VQSDGDSMN-----TTIFVGGLDPNVSDEDLRQPFSQY-- 311
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 312 GEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNP 361
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V+++LL E F+ P ++ K++ + YGFV + D
Sbjct: 170 RSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDE 229
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------YASS----QREDTSGHFN 134
+ A+ +NG + +P+++ A YAS+ Q + S +
Sbjct: 230 NERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTT 289
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG L P V+D L FS + ++ +G GFV F N+ +A+ A+ L
Sbjct: 290 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKL 343
Query: 195 NGKWLGNRQIRCNWA 209
NG +G + +R +W
Sbjct: 344 NGTVIGKQTVRLSWG 358
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 153/290 (52%), Gaps = 22/290 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++H + L F STG + K+I+ ++ YGFV++ +A +
Sbjct: 93 KTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATAEKVLQ 152
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + QP ++NWA S+ +R D + ++FVGDL+ +VTD+ L F S +P+
Sbjct: 153 NYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPS 212
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + + A+ ++NG + +R +R A +SG +
Sbjct: 213 VKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 272
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+Q +NG S +S+ D+ NN TT++VG L VT DL + F
Sbjct: 273 QQGGYG------SNGASAQGFQSDGDS--NN---TTIFVGGLDPNVTDEDLKQPFSQY-- 319
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 320 GEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGTVIGKQTVRLSWGRNP 369
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D + S++VG++ VT++LLQE F S P ++ K++ + YGFV + D
Sbjct: 179 RSDNAPDLSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDD 238
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------YASS-------QREDTSGHFNV 135
A+ +NG + +P+++ A Y S+ Q + S + +
Sbjct: 239 SERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTI 298
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVG L P VTD L FS + ++ +G GFV F N+++A+ A+ LN
Sbjct: 299 FVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VGKGCGFVQFANRDNAEEALQKLN 352
Query: 196 GKWLGNRQIRCNWA 209
G +G + +R +W
Sbjct: 353 GTVIGKQTVRLSWG 366
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
QRE + + +++GDL + + L +CF + +V+ +++TG S G+GFV F
Sbjct: 85 QREGSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTH 144
Query: 185 EDAQSAINDLNGKWLGNRQ--IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSN 242
A+ + + G + N + R NWA ++GD K +
Sbjct: 145 ATAEKVLQNYGGILMPNTEQPFRLNWAT--FSTGD----------------------KRS 180
Query: 243 EDAPENNPQYTTVYVGNLSSEVTSVDLHRHF-----HALCVGTIEDVRVQRDKGFGFVRY 297
++AP+ +++VG+L+++VT L F + D R KG+GFVR+
Sbjct: 181 DNAPD-----LSIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRF 235
Query: 298 STHPEAALAIQMGNARILCGKPIKC 322
E A+ N +P++
Sbjct: 236 GDDSERTQAMTEMNGVYCSSRPMRI 260
>gi|195055815|ref|XP_001994808.1| GH17439 [Drosophila grimshawi]
gi|193892571|gb|EDV91437.1| GH17439 [Drosophila grimshawi]
Length = 520
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 177 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 236
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 237 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 281
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 282 -CTVYVGGVNSALTALSEEILQKTF--ALYGAIQEIRVFKDKGYAFVRFSTKEAATHAIV 338
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P S T
Sbjct: 339 GVHNTEINAQPVKCSWGKESGDPNNSQT 366
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 180 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 239
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 240 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 299
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+++ + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 300 ILQKTFALYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 353
Query: 208 WAAKGATSGDEKQS 221
W G SGD S
Sbjct: 354 W---GKESGDPNNS 364
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 14/290 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ + L FS G + K+I+ ++ YGFV++ +A +
Sbjct: 33 KTIWIGDLQQWMDENYLHSCFSHAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 92
Query: 104 TLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+ NG + QP ++NWA A +R +T F++FVGDL+ +VTD L F S FP+
Sbjct: 93 SYNGTMMPNAEQPFRLNWAAFSAGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRFPS 152
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TG S+G+GFV F ++ + A+ ++NG + +R +R A S +
Sbjct: 153 VKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGIYCSSRPMRVGVATPKKPSAQQ 212
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ SS + V L+ G + ++ + + TT++VG L S+VT +L + F
Sbjct: 213 QFSSQA---VILSGGYASNGSATHGSQSDGDSSNTTIFVGGLDSDVTDEELRQSFTQF-- 267
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV++S A AIQ + I+ + ++ SWG P
Sbjct: 268 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSP 317
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 152/291 (52%), Gaps = 24/291 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G + K+I+ ++ YGF+++ + A +
Sbjct: 69 ARTLWIGDLQYWMDENYLYSCFSQAGEVISVKIIRNKQTGQPEGYGFIEFSNHAVAEQVL 128
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
NG+ + QP K+NWA A +R D + +FVGDL+ +VTD L F S +P
Sbjct: 129 QNYNGQMMPNVNQPFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYP 188
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ +G
Sbjct: 189 SVKGAKVVFDRTTGRSKGYGFVKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKNTGG 248
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ SS ++ + T G ++ D+ NN TTV+VG L VT L + F
Sbjct: 249 PQPSS---AIYQNTQG-------TDSDSDPNN---TTVFVGGLDPSVTDELLKQTFSPY- 294
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI++ N L G+ I+ SWG P
Sbjct: 295 -GELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGSQLGGQSIRLSWGRSP 344
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLI----KKDKSSYGF 89
SG R D + +++VG++ VT+ +LQ+ F S P ++G K++ YGF
Sbjct: 150 SGAGEKRGDDGSDYTIFVGDLASDVTDFILQDTFKSRYPSVKGAKVVFDRTTGRSKGYGF 209
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWA---------------YASSQREDTSGHFN 134
V + D A+ +NG++ + +++ A Y ++Q D+ N
Sbjct: 210 VKFADSDEQTRAMTEMNGQYCSSRAMRLGPASNKKNTGGPQPSSAIYQNTQGTDSDSDPN 269
Query: 135 ---VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
VFVG L P VTD L FS + ++ ++ G FV + N+ A+ AI
Sbjct: 270 NTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCG------FVQYSNRASAEEAI 323
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
LNG LG + IR +W A +++ S
Sbjct: 324 RVLNGSQLGGQSIRLSWGRSPANKQPQQEQS 354
>gi|195449393|ref|XP_002072055.1| GK22641 [Drosophila willistoni]
gi|194168140|gb|EDW83041.1| GK22641 [Drosophila willistoni]
Length = 521
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 180 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 239
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + ++V LT E N+ +P N
Sbjct: 240 TAMNGQWLGSRSIRTNWATR-------KPPASKENVKPLTF-----DEVYNQSSPSN--- 284
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 285 -CTVYVGGVNSALTALSEEILQKTFTPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 341
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L +P+KCSWG + P + T
Sbjct: 342 GVHNTELNAQPVKCSWGKESGDPNNAQT 369
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 183 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 242
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 243 NGQWLGSRSIRTNWATRKPPASKENVKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 302
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ L + ++C+
Sbjct: 303 ILQKTFTPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 356
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 357 W---GKESGD 363
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 146/290 (50%), Gaps = 27/290 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++H + + L F+STG + K+I+ S YGF ++F +A +
Sbjct: 97 KTLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQ 156
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
G + Q ++NWA S+ + D ++FVGDL+ +VTD+ L FS +P+
Sbjct: 157 NYAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPS 216
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F ++ + A+ +NG + +R +R A +SG +
Sbjct: 217 VKAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQ 276
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
TNG S E + + TT++VG L S VT DL + F
Sbjct: 277 PGGQ--------TNGTSSQSEADSTN--------TTIFVGGLDSNVTDEDLKQTFSQY-- 318
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 319 GEIASVKIPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQTVRLSWGRNP 368
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 26/187 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRS 97
D T S++VG++ VT+++L E FSS+ P ++ K++ + YGFV + D
Sbjct: 185 DNVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDESE 244
Query: 98 AALAIVTLNGRHIFGQPIKVNWAY---------------ASSQREDTSGHFNVFVGDLSP 142
+ A+ +NG + +P+++ A SSQ E S + +FVG L
Sbjct: 245 RSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIFVGGLDS 304
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
VTD L FS + + ++ +G GFV F N+ +A+ A+ LNG +G +
Sbjct: 305 NVTDEDLKQTFSQYGEIASVKIP------VGKGCGFVQFANRNNAEEALQKLNGTMIGKQ 358
Query: 203 QIRCNWA 209
+R +W
Sbjct: 359 TVRLSWG 365
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 148/290 (51%), Gaps = 27/290 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++H + L F+STG + K+I+ ++ YGFV+++ +A +
Sbjct: 73 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 132
Query: 104 TLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + QP ++NWA S+ + D ++FVGDL+ +VTD+ L F SV+P+
Sbjct: 133 NYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 192
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + + A+ +NG + +R +R A +SG +
Sbjct: 193 VKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQ 252
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ G+S+G +E N TT++VG L V+ DL + F
Sbjct: 253 Q------------GGLSNGTANQSEADSTN----TTIFVGGLDPNVSDEDLRQPFSQY-- 294
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N + + ++ SWG P
Sbjct: 295 GEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNP 344
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST +++VG + P V++ L++ FS G + K+ GFV + +R +A A+
Sbjct: 268 STNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGC--GFVQFANRNNAEEALQK 325
Query: 105 LNGRHIFGQPIKVNWA 120
LNG I Q ++++W
Sbjct: 326 LNGTTIGKQTVRLSWG 341
>gi|145334517|ref|NP_001078604.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005307|gb|AED92690.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 421
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 146/290 (50%), Gaps = 14/290 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L FS TG L K+I+ + YGF+++ +A +
Sbjct: 23 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 82
Query: 103 VTLNGRHIFGQPI--KVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
T NG + G + ++NWA + S Q+ D ++FVGDL+P+VTD L F V + +
Sbjct: 83 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 142
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R + A G +
Sbjct: 143 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQ 202
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+Q +V ++ PE++ TT+ V NL VT +L + F L
Sbjct: 203 QQYVTKVTVPSAVAAPV----QAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQL-- 256
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG+G+V++ T P A A+Q +++ + ++ SW P
Sbjct: 257 GEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNP 306
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 87/202 (43%), Gaps = 40/202 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
+ DA S++VG++ P VT+ LLQE F + G K++ + YGFV + +
Sbjct: 109 KVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEE 168
Query: 96 RSAALAIVTLNGRHIFGQPIKVN----------------------------WAYASSQRE 127
A+ +NG + +P++++ AY +
Sbjct: 169 SERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKVTVPSAVAAPVQAYVAPPES 228
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D + + V +L VT+ L FS V++ K ++G+G+V F+ + A
Sbjct: 229 DVTCT-TISVANLDQNVTEEELKKAFSQL-----GEVIY-VKIPATKGYGYVQFKTRPSA 281
Query: 188 QSAINDLNGKWLGNRQIRCNWA 209
+ A+ + G+ +G + +R +W+
Sbjct: 282 EEAVQRMQGQVIGQQAVRISWS 303
>gi|344228217|gb|EGV60103.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 475
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAIVT 104
R +YV + + A L +VF G ++ K++ K +Y F+++ + SA+ A+
Sbjct: 49 RILYVAGLDKSIDEAELSKVFGQYGSIKLIKILGDKNKLGFNYAFIEFQEPNSASDALSG 108
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LNG++I I + WAY SS FNVFVGDLSPEV D TL FS F + +
Sbjct: 109 LNGKNINDHIIVIKWAYHSSNANSVQSAEPVFNVFVGDLSPEVDDVTLSKAFSQFKSKRE 168
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A VMWD +T RSRG+GFV+F +Q DAQ AIN +NG+ + R IRCNWA+
Sbjct: 169 AHVMWDMQTSRSRGYGFVTFLDQLDAQMAINSMNGQEVLGRVIRCNWAS 217
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++V L + +A L F + + +++ D K + F+ F+ A A++ L
Sbjct: 51 LYVAGLDKSIDEAELSKVFGQYGSIKLIKILGD-KNKLGFNYAFIEFQEPNSASDALSGL 109
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NGK + + I WA SN ++ ++
Sbjct: 110 NGKNINDHIIVIKWAY----------------------------HSSNANSVQSAEPVFN 141
Query: 255 VYVGNLSSEVTSVDLHRHFHALC----VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
V+VG+LS EV V L + F + D++ R +G+GFV + +A +AI
Sbjct: 142 VFVGDLSPEVDDVTLSKAFSQFKSKREAHVMWDMQTSRSRGYGFVTFLDQLDAQMAINSM 201
Query: 311 NARILCGKPIKCSWGS---KPTPPGTSSTPL 338
N + + G+ I+C+W S KP P +TPL
Sbjct: 202 NGQEVLGRVIRCNWASHKQKPQQPFKKTTPL 232
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTVY+GN++ +L G I D++ +KG FV+Y +H AA+ I
Sbjct: 386 TTVYLGNIAHFTRQEELIPLIQGF--GYIVDLKFHPEKGCAFVKYDSHERAAMTIVQLAG 443
Query: 313 RILCGKPIKCSWGSKPTPPG 332
L G+P+KC WG K PPG
Sbjct: 444 FNLNGRPLKCGWG-KDRPPG 462
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 18/300 (6%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRR 96
R ++++VG++ + L FS TG + K+I+ +S YGFV++ R
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 97 SAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFA 151
+A + +G + QP ++NWA S+ +R +G +VFVGDLSP+VTD L
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 152 CFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
FS +P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + NRQ+R A
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQE--KSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
+++Q S S++V+ S+G S D N T++VG + +V D
Sbjct: 281 PKRAIANQQQHS-SQAVILAGGHGSNGSMGYGSQSDGESTN---ATIFVGGIDPDVIDED 336
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L + F G + V++ KG GFV+++ A AI+ N ++ ++ SWG P
Sbjct: 337 LRQPFSQF--GEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP 394
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
ST +++VG I P V + L++ FS G + K+ + K GFV + DR+SA AI
Sbjct: 318 STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGK---GCGFVQFADRKSAEDAIE 374
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDT 129
+LNG I ++++W + ++++ T
Sbjct: 375 SLNGTVIGKNTVRLSWGRSPNKQDLT 400
>gi|198451107|ref|XP_002137227.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
gi|198131338|gb|EDY67785.1| GA26680 [Drosophila pseudoobscura pseudoobscura]
Length = 503
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 171 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 230
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 231 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 275
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 276 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 332
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L +P+KCSWG + P + T
Sbjct: 333 GVHNTELNAQPVKCSWGKESGDPNNAQT 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ L + ++C+
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 348 W---GKESGD 354
>gi|195143945|ref|XP_002012957.1| GL23648 [Drosophila persimilis]
gi|194101900|gb|EDW23943.1| GL23648 [Drosophila persimilis]
Length = 503
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 171 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 230
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 231 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 275
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 276 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 332
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L +P+KCSWG + P + T
Sbjct: 333 GVHNTELNAQPVKCSWGKESGDPNNAQT 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 174 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 233
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 234 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 293
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ L + ++C+
Sbjct: 294 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTELNAQPVKCS 347
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 348 W---GKESGD 354
>gi|357113824|ref|XP_003558701.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 418
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ A L F+ TG ++ K+I+ ++ YGF+++ +A +
Sbjct: 16 VRTLWIGDLQFWADEAYLYNCFAHTGEVQSVKIIRNKVTNLPEGYGFIEFISHEAAEKVL 75
Query: 103 VTLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G ++NWA SS +R D ++FVGDL+P+VTD L F V +
Sbjct: 76 QTYNGAQMPGSEHTFRLNWASFSSGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + R +R + A +SG
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGS 195
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q +K+ + + ++ P+++ TT+++GNL T +L + LC
Sbjct: 196 QLQYGTAKA---MYPAAAYAVPQAQPALPDSDLTNTTIFIGNLDPNATEEELRQ----LC 248
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ KG GFV+Y++ A A+Q + ++ + ++ SWG P
Sbjct: 249 VQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSP 301
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 39/211 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + + G K++ + YGFV + D
Sbjct: 103 RPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADE 162
Query: 96 RSAALAIVTLNGRHIFGQPIKVN-----------------------WAYASSQRE----D 128
A+ +NG + +P++++ AYA Q + D
Sbjct: 163 NEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGTAKAMYPAAAYAVPQAQPALPD 222
Query: 129 TS-GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ + +F+G+L P T+ L C + K +G GFV + ++ A
Sbjct: 223 SDLTNTTIFIGNLDPNATEEELRQL------CVQFGELIYVKIPVGKGCGFVQYASRASA 276
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+ A+ L+G +G + +R +W A D+
Sbjct: 277 EEAVQRLHGTMIGQQVVRLSWGRSPANKQDQ 307
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
Y + A PQ +P L P D T ++++GN+ P T L+++ G L K+
Sbjct: 206 YPAAAYAVPQAQPAL-----PDSDL-TNTTIFIGNLDPNATEEELRQLCVQFGELIYVKI 259
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 260 PVGKGC--GFVQYASRASAEEAVQRLHGTMIGQQVVRLSWGRSPANKQDQS 308
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 152/292 (52%), Gaps = 14/292 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R+V++G++H + L F+ TG + K+I+ ++ YGFV+++ R +A +
Sbjct: 100 IRTVWLGDLHHWMDENYLHNCFAHTGEVVSAKVIRNKQTGQSEGYGFVEFYSRATAEKVL 159
Query: 103 VTLNGRHI--FGQPIKVNWA-YASSQRE--DTSGHFNVFVGDLSPEVTDATLFACFS-VF 156
NG + Q ++NWA +++ +R D + ++FVGDL+ +VTDA L F+ +
Sbjct: 160 QNYNGTMMPNTDQAFRLNWATFSAGERRSSDATSDLSIFVGDLAIDVTDAMLQETFAGRY 219
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A T G
Sbjct: 220 SSIKGAKVVIDSNTGRSKGYGFVRFGDENERTRAMTEMNGVYCSSRPMRIGVATPKKTYG 279
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
++Q S V L G + + E + TT++VG L S+ + DL + F L
Sbjct: 280 YQQQY--SSQAVLLAGGHAANGAVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPF--L 335
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A AI N ++ + ++ SWG P
Sbjct: 336 QFGEVVSVKIPVGKGCGFVQFADRKNAEEAIHALNGTVIGKQTVRLSWGRSP 387
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 43/217 (19%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDRRS 97
DA++ S++VG++ VT+A+LQE F+ ++G K++ + YGFV + D
Sbjct: 190 DATSDLSIFVGDLAIDVTDAMLQETFAGRYSSIKGAKVVIDSNTGRSKGYGFVRFGDENE 249
Query: 98 AALAIVTLNGRHIFGQPIKVNWA-----------YAS---------------SQREDTSG 131
A+ +NG + +P+++ A Y+S +Q + G
Sbjct: 250 RTRAMTEMNGVYCSSRPMRIGVATPKKTYGYQQQYSSQAVLLAGGHAANGAVAQGSHSEG 309
Query: 132 HFN---VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQ 188
N +FVG L + +D L F F ++ +G GFV F ++++A+
Sbjct: 310 DLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIP------VGKGCGFVQFADRKNAE 363
Query: 189 SAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSK 225
AI+ LNG +G + +R +W G + G++ SDS
Sbjct: 364 EAIHALNGTVIGKQTVRLSW---GRSPGNKHWRSDSN 397
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 149/286 (52%), Gaps = 27/286 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
+++++G++ P + + + F++TG ++ KLI+ +S YGFV++ R +A +
Sbjct: 90 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 149
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 150 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 208
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G ++
Sbjct: 209 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 268
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ +++ EN+P TT++VG L VT L + F G
Sbjct: 269 RVPNAQGAQS-----------------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPY--G 309
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ V++ K GFV+Y P A A+ + ++ G+ ++ SWG
Sbjct: 310 EVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWG 355
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+ L G
Sbjct: 286 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQALAVLQGT 343
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 344 LIGGQNVRLSWGRSLSNKQ 362
>gi|189233691|ref|XP_969160.2| PREDICTED: similar to AGAP005292-PA [Tribolium castaneum]
Length = 358
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 113/196 (57%), Gaps = 16/196 (8%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
H ++FVGDLSPE+ TL F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 50 HHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSFIKKAEAESAI 109
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
N +NG+WLG+R IR NWA + + + +S S E+ N +++
Sbjct: 110 NAMNGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYN--------------QSSAT 155
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
TVY G +++ + L + F L G I+++RV ++KG+ F+R+ST A AI +
Sbjct: 156 NCTVYCGGITNGLCEDLLQKTF--LPYGIIQEIRVFKEKGYAFIRFSTKESATHAIVGVH 213
Query: 312 ARILCGKPIKCSWGSK 327
+ G+ +KCSWG +
Sbjct: 214 NSEIGGQTVKCSWGKE 229
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDY 92
N P + + ++VG++ P++ L+E F++ G + C++++ ++ YGFV +
Sbjct: 40 NTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAFGEISDCRVVRDPQTLKSKGYGFVSF 99
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNV 135
+ A AI +NG+ + + I+ NWA + + ++ + V
Sbjct: 100 IKKAEAESAINAMNGQWLGSRSIRTNWATRKPPAPKSEANSKPMSFDEIYNQSSATNCTV 159
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+ G ++ + + L F + + RV + +G+ F+ F +E A AI ++
Sbjct: 160 YCGGITNGLCEDLLQKTFLPYGIIQEIRVF------KEKGYAFIRFSTKESATHAIVGVH 213
Query: 196 GKWLGNRQIRCNWAAKGATSGD 217
+G + ++C+W G SGD
Sbjct: 214 NSEIGGQTVKCSW---GKESGD 232
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 239 EKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGF 292
+ SN + N ++ ++VG+LS E+ + L F A G I D RV RD KG+
Sbjct: 37 QNSNTPSSNNKAEHHHIFVGDLSPEIETQTLREAFAAF--GEISDCRVVRDPQTLKSKGY 94
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
GFV + EA AI N + L + I+ +W ++ P
Sbjct: 95 GFVSFIKKAEAESAINAMNGQWLGSRSIRTNWATRKPP 132
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 149/286 (52%), Gaps = 27/286 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
+++++G++ P + + + F++TG ++ KLI+ +S YGFV++ R +A +
Sbjct: 89 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 148
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 149 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 207
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G ++
Sbjct: 208 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 267
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ +++ EN+P TT++VG L VT L + F G
Sbjct: 268 RVPNAQGAQS-----------------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPY--G 308
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ V++ K GFV+Y P A A+ + ++ G+ ++ SWG
Sbjct: 309 EVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWG 354
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+ L G
Sbjct: 285 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQALAVLQGT 342
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 343 LIGGQNVRLSWGRSLSNKQ 361
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 149/286 (52%), Gaps = 27/286 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
+++++G++ P + + + F++TG ++ KLI+ +S YGFV++ R +A +
Sbjct: 78 VKTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRIL 137
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 138 QTYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSV 196
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G ++
Sbjct: 197 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQE 256
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ +++ EN+P TT++VG L VT L + F G
Sbjct: 257 RVPNAQGAQS-----------------ENDPNNTTIFVGGLDPNVTEDVLKQVFAPY--G 297
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ V++ K GFV+Y P A A+ + ++ G+ ++ SWG
Sbjct: 298 EVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWG 343
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+ L G
Sbjct: 274 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQALAVLQGT 331
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 332 LIGGQNVRLSWGRSLSNKQ 350
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 157/322 (48%), Gaps = 25/322 (7%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK 84
+ AP +P +PP A +++++G++ + L FS TG + K+I+ +
Sbjct: 51 MWAPNAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 85 SS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVF 136
++ YGF+++ R A + T NG + GQ ++NWA SS +R D S + +F
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIF 170
Query: 137 VGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
VGDL+ +V+D L F + + A+V+ D+ TGR++G+GFV F ++ + A+ ++
Sbjct: 171 VGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQ 230
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G R +R G S + SK+ + G + EN+P TT+
Sbjct: 231 GVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN---------ENDPNNTTI 276
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VGNL VT L + F G + V++ K GFV+++ A A+++ N +L
Sbjct: 277 FVGNLDPNVTDEHLKQVFTQY--GELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLL 334
Query: 316 CGKPIKCSWGSKPTPPGTSSTP 337
G+ ++ SWG P T P
Sbjct: 335 GGQNVRLSWGRSPANKQTQQDP 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS-----YGFVDYFD 94
R D S +++VG++ V++ L EVF + ++G K++ D+++ YGFV + D
Sbjct: 160 RHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVI-DRTTGRTKGYGFVRFAD 218
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFV 137
A+ + G +P+++ A +Q E+ + +FV
Sbjct: 219 ESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFV 278
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
G+L P VTD L F+ + ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 279 GNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCG------FVQFADRSSAEEALRVLNGT 332
Query: 198 WLGNRQIRCNWA---AKGATSGDEKQSSDSKS 226
LG + +R +W A T D Q + S S
Sbjct: 333 LLGGQNVRLSWGRSPANKQTQQDPNQWNGSSS 364
>gi|326528543|dbj|BAJ93453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 416
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 155/293 (52%), Gaps = 18/293 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ L F+ TG ++ KLI+ S YGF+++ +A +
Sbjct: 16 VRTLWIGDLQYWADENYLYGCFAHTGEVQSVKLIRNKLSGLPEGYGFIEFISHEAAEKVL 75
Query: 103 VTLNGRHIFGQPI--KVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
NG + G + ++NWA SS +R D ++FVGDL+P+VTD L F V +
Sbjct: 76 QAYNGAQMPGTELTFRLNWASFSSGEKRPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYS 135
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + R +R + A +SG
Sbjct: 136 SVRGAKVVTDPNTGRSKGYGFVKFADENEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGS 195
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q +K++ T + ++ P+++ TT+++GNL VT +L + +C
Sbjct: 196 QLQYGAAKAMYPAT---AYAIPQAQTVLPDSDLTNTTIFIGNLDPNVTEEELRQ----IC 248
Query: 278 V--GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V G + V++ KG GFV+Y++ A A+Q + ++ + ++ SWG P
Sbjct: 249 VQFGELIYVKIPVGKGCGFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSP 301
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 39/211 (18%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + + G K++ + YGFV + D
Sbjct: 103 RPDAGPDHSIFVGDLAPDVTDYLLQETFRVNYSSVRGAKVVTDPNTGRSKGYGFVKFADE 162
Query: 96 RSAALAIVTLNGRHIFGQPIKVN-----------------------WAYASSQREDT--- 129
A+ +NG + +P++++ AYA Q +
Sbjct: 163 NEKTRAMSEMNGVYCSTRPMRISAAIPKKSSGSQLQYGAAKAMYPATAYAIPQAQTVLPD 222
Query: 130 --SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ +F+G+L P VT+ L C + K +G GFV + ++ A
Sbjct: 223 SDLTNTTIFIGNLDPNVTEEELRQI------CVQFGELIYVKIPVGKGCGFVQYASRASA 276
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+ A+ L+G +G + +R +W A D+
Sbjct: 277 EEAVQRLHGTVIGQQVVRLSWGRSPANKQDQ 307
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
Y + A PQ + +L P D T ++++GN+ P VT L+++ G L K+
Sbjct: 206 YPATAYAIPQAQTVL-----PDSDL-TNTTIFIGNLDPNVTEEELRQICVQFGELIYVKI 259
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
GFV Y R SA A+ L+G I Q ++++W + + ++D S
Sbjct: 260 PVGKGC--GFVQYASRASAEEAVQRLHGTVIGQQVVRLSWGRSPANKQDQS 308
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
gi|122246579|sp|Q0WW84.1|RB47B_ARATH RecName: Full=Polyadenylate-binding protein RBP47B;
Short=Poly(A)-binding protein RBP47B; AltName:
Full=RNA-binding protein 47B; Short=AtRBP47B
gi|110741040|dbj|BAE98614.1| putative nuclear acid binding protein [Arabidopsis thaliana]
gi|111074446|gb|ABH04596.1| At3g19130 [Arabidopsis thaliana]
gi|332642675|gb|AEE76196.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRR 96
R ++++VG++ + L FS TG + K+I+ +S YGFV++ R
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 97 SAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFA 151
+A + +G + QP ++NWA S+ +R +G +VFVGDLSP+VTD L
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 152 CFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
FS +P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + NRQ+R A
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQE--KSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
+++Q S S++V+ S+G S D N T++VG + +V D
Sbjct: 281 PKRAIANQQQHS-SQAVILAGGHGSNGSMGYGSQSDGESTN---ATIFVGGIDPDVIDED 336
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L + F G + V++ KG GFV+++ A AI+ N ++ ++ SWG P
Sbjct: 337 LRQPFSQF--GEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP 394
Query: 329 T 329
Sbjct: 395 N 395
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
ST +++VG I P V + L++ FS G + K+ + K GFV + DR+SA AI
Sbjct: 318 STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGK---GCGFVQFADRKSAEDAIE 374
Query: 104 TLNGRHIFGQPIKVNWAYASSQ--REDTSGHFN 134
+LNG I ++++W + ++ R D+ +N
Sbjct: 375 SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 407
>gi|195110887|ref|XP_002000011.1| GI22766 [Drosophila mojavensis]
gi|193916605|gb|EDW15472.1| GI22766 [Drosophila mojavensis]
Length = 387
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 119/214 (55%), Gaps = 21/214 (9%)
Query: 126 REDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
R F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF +
Sbjct: 38 RRRRQKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKS 97
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDA 245
+A+SAI +NG+WLG+R IR NWA + K + +++ LT E N+ +
Sbjct: 98 EAESAITAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSS 145
Query: 246 PENNPQYTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPE 302
P N TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST
Sbjct: 146 PSN----CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEA 199
Query: 303 AALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
A AI + + +P+KCSWG + P S T
Sbjct: 200 ATHAIVGVHNTEINAQPVKCSWGKESGDPNNSQT 233
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 88/194 (45%), Gaps = 31/194 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 47 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 106
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 107 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 166
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 167 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 220
Query: 208 WAAKGATSGDEKQS 221
W G SGD S
Sbjct: 221 W---GKESGDPNNS 231
>gi|226480630|emb|CAX73412.1| TIA1 cytotoxic granule-associated RNA binding protein [Schistosoma
japonicum]
Length = 651
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 118/206 (57%), Gaps = 19/206 (9%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
S ED S F++FVGDL+PEV D TL A FS F T ++ +++ D T + +G+GFV++
Sbjct: 150 SLSEDDS--FHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYAT 207
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+++A+ AI +NG+ +G+R IR NWA + D+ + + +E+ N S
Sbjct: 208 RQEAERAIRIMNGQIIGSRAIRTNWAVR-KDPADQAKDHRPLNYLEVFNASSAAN----- 261
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
TT+YVG +++E+T L F G I+++R+ +DKGF FVR+ +H A
Sbjct: 262 ---------TTIYVGGITNELTEKLLQDSFKQF--GEIKEIRIFKDKGFSFVRFDSHVAA 310
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPT 329
AI + +I+ + KCSWG +PT
Sbjct: 311 TQAIVTMHGKIVGDQACKCSWGKEPT 336
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 29/213 (13%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTL 105
++VG++ P+V + L FS+ G + CK+IK + YGFV Y R+ A AI +
Sbjct: 159 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 218
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH--------FN--------VFVGDLSPEVTDATL 149
NG+ I + I+ NWA + H FN ++VG ++ E+T+ L
Sbjct: 219 NGQIIGSRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSAANTTIYVGGITNELTEKLL 278
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F + R+ D +GF FV F + A AI ++GK +G++ +C+W
Sbjct: 279 QDSFKQFGEIKEIRIFKD------KGFSFVRFDSHVAATQAIVTMHGKIVGDQACKCSWG 332
Query: 210 AKGATSGDE---KQSSDSKSVVELTNGISDGQE 239
+ + + K+ S + V L + ++D +
Sbjct: 333 KEPTFTNKQVLAKRLSSTLLVPNLNHNMNDDRN 365
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 209 AAKGATSGDEKQ-SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
+ K + D+ Q SS+SK + +G +D + E++ + ++VG+L+ EV
Sbjct: 118 SIKSVSESDQSQHSSNSK----INHGTTDNVTSTTRSLSEDDSFH--IFVGDLAPEVQDE 171
Query: 268 DLHRHFHALCVGT----IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F T I+D+ Q+ KG+GFV Y+T EA AI++ N +I+ + I+ +
Sbjct: 172 TLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIMNGQIIGSRAIRTN 231
Query: 324 WGSKPTP 330
W + P
Sbjct: 232 WAVRKDP 238
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 42 FDASTC--RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAA 99
F+AS+ ++YVG I ++T LLQ+ F G ++ ++ KDK + FV + +A
Sbjct: 254 FNASSAANTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIF-KDK-GFSFVRFDSHVAAT 311
Query: 100 LAIVTLNGRHIFGQPIKVNW 119
AIVT++G+ + Q K +W
Sbjct: 312 QAIVTMHGKIVGDQACKCSW 331
>gi|195353012|ref|XP_002043004.1| GM16370 [Drosophila sechellia]
gi|194127069|gb|EDW49112.1| GM16370 [Drosophila sechellia]
Length = 504
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 119/208 (57%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 164 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 223
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K ++ +++ LT E N+ +P N
Sbjct: 224 TAMNGQWLGSRSIRTNWATR-------KPPANKENIKPLTF-----DEVYNQSSPSN--- 268
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 269 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 325
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 326 GVHNTEINAQPVKCSWGKESGDPNNAQT 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 167 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 226
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 227 NGQWLGSRSIRTNWATRKPPANKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 286
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 287 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 340
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 341 W---GKESGD 347
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 153/301 (50%), Gaps = 18/301 (5%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRR 96
R ++++VG++ + L FS TG + K+I+ +S YGFV++ R
Sbjct: 58 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 117
Query: 97 SAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFA 151
+A + +G + QP ++NWA S+ +R +G +VFVGDLSP+VTD L
Sbjct: 118 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 177
Query: 152 CFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
FS +P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + NRQ+R A
Sbjct: 178 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 237
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQ--EKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
+++Q S S++V+ S+G S D N T++VG + +V D
Sbjct: 238 PKRAIANQQQHS-SQAVILAGGHGSNGSMGYGSQSDGESTN---ATIFVGGIDPDVIDED 293
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L + F G + V++ KG GFV+++ A AI+ N ++ ++ SWG P
Sbjct: 294 LRQPFSQF--GEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP 351
Query: 329 T 329
Sbjct: 352 N 352
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
ST +++VG I P V + L++ FS G + K+ + K GFV + DR+SA AI
Sbjct: 275 STNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGK---GCGFVQFADRKSAEDAIE 331
Query: 104 TLNGRHIFGQPIKVNWAYASSQ--REDTSGHFN 134
+LNG I ++++W + ++ R D+ +N
Sbjct: 332 SLNGTVIGKNTVRLSWGRSPNKQWRGDSGQQWN 364
>gi|315585206|gb|ADU34124.1| hypothetical protein [Vitis labrusca]
Length = 66
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/66 (92%), Positives = 66/66 (100%)
Query: 120 AYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
AYASSQREDTSGH+N+FVGDLSPEVTDATLFACFSV+P+CSDARVMWDQKTGRSRGFGFV
Sbjct: 1 AYASSQREDTSGHYNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFV 60
Query: 180 SFRNQE 185
SFRNQ+
Sbjct: 61 SFRNQQ 66
>gi|195391718|ref|XP_002054507.1| GJ22768 [Drosophila virilis]
gi|194152593|gb|EDW68027.1| GJ22768 [Drosophila virilis]
Length = 504
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 170 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 229
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 230 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 274
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 275 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 331
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P S +
Sbjct: 332 GVHNTEINAQPVKCSWGKESGDPNNSQS 359
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 31/199 (15%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 173 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 232
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 233 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 292
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 293 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 346
Query: 208 WAAKGATSGDEKQSSDSKS 226
W G SGD S S
Sbjct: 347 W---GKESGDPNNSQSMAS 362
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 158/311 (50%), Gaps = 28/311 (9%)
Query: 26 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
+PQ +P S N R++++G++ + + F+ TG + K+I+ ++
Sbjct: 50 GSPQGQPPQSAN------GDEVRTLWIGDLQYWMDENYIFNCFAHTGEVSSVKVIRNKQT 103
Query: 86 S----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGD 139
YGF+++ R +A + T NG + Q ++NWA A +R+D S + +FVGD
Sbjct: 104 GQSEGYGFIEFLTRPAAERVLQTYNGTAMPNGAQNFRLNWASAGEKRQDDSPDYTIFVGD 163
Query: 140 LSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKW 198
L+ +VTD L F + + A+V+ D+ TGR++G+GFV F ++ + A+ ++NG
Sbjct: 164 LAGDVTDYVLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVKFGDESEQMRAMTEMNGVH 223
Query: 199 LGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVG 258
+R +R AA TSG ++ S S + Q NE+ P N TT++VG
Sbjct: 224 CSSRPMRIGPAANKNTSGGQQFSKTS---------YQNPQGAQNENDPNN----TTIFVG 270
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
NL + VT L + F G + V++ K GFV+++ A A+++ N + G+
Sbjct: 271 NLDANVTDEHLRQVFGQY--GELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGTQIGGQ 328
Query: 319 PIKCSWGSKPT 329
I+ SWG P+
Sbjct: 329 NIRLSWGRSPS 339
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 30/290 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++H + L F++TG L K+I+ ++ YGFV++F +A +
Sbjct: 84 RTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQ 143
Query: 104 TLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPT 158
G + QP ++NWA S +R D ++FVGDL+ +V+D+ L F+ +P+
Sbjct: 144 GYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPS 203
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F ++ + A+ ++NG + +R +R A +SG +
Sbjct: 204 VKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 263
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+Q S S V+ SDG + TT++VG L V+ DL + F
Sbjct: 264 QQYS---SHVQ-----SDGDSMN-----------TTIFVGGLDPNVSDEDLRQPFSQY-- 302
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 303 GEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNP 352
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 23/186 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V+++LL E F+ P ++ K++ + YGFV + D
Sbjct: 170 RSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDE 229
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YASS-QREDTSGHFNVFVGDLSPE 143
+ A+ +NG + +P+++ A Y+S Q + S + +FVG L P
Sbjct: 230 NERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPN 289
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V+D L FS + ++ +G GFV F N+ +A+ A+ LNG +G +
Sbjct: 290 VSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKLNGTVIGKQT 343
Query: 204 IRCNWA 209
+R +W
Sbjct: 344 VRLSWG 349
>gi|194746386|ref|XP_001955661.1| GF18875 [Drosophila ananassae]
gi|190628698|gb|EDV44222.1| GF18875 [Drosophila ananassae]
Length = 495
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 163 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 222
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 223 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 267
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 268 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 324
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 325 GVHNTEINAQPVKCSWGKESGDPNNAQT 352
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 340 W---GKESGD 346
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 154/322 (47%), Gaps = 25/322 (7%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD- 83
+ AP +P +PP A +++++G++ + L FS TG + K+I+
Sbjct: 49 MWAPNTQPPQQSAVPPPTSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKL 108
Query: 84 ---KSSYGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVF 136
YGF+++ R A + T NG + GQ ++NWA SS +R D S + +F
Sbjct: 109 NNQSEGYGFLEFISRAGAERVLQTYNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIF 168
Query: 137 VGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
VGDL+ +V+D L F + + A+V+ D+ TGRS+G+GFV F ++ + A+ ++
Sbjct: 169 VGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEMQ 228
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G R +R G S + SK+ + G + EN+P TT+
Sbjct: 229 GVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN---------ENDPNNTTI 274
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VGNL VT L + F G + V++ K GFV+++ A A+++ N +L
Sbjct: 275 FVGNLDPNVTDEHLKQVFTQY--GELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLL 332
Query: 316 CGKPIKCSWGSKPTPPGTSSTP 337
G+ ++ SWG P T P
Sbjct: 333 GGQNVRLSWGRSPANKQTQQDP 354
>gi|297807995|ref|XP_002871881.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
gi|297317718|gb|EFH48140.1| hypothetical protein ARALYDRAFT_488820 [Arabidopsis lyrata subsp.
lyrata]
Length = 426
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%), Gaps = 12/292 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L FS TG L K+I+ + YGF+++ +A +
Sbjct: 22 VRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTL 81
Query: 103 VTLNGRHIFGQPI--KVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
T NG + G + ++NWA + S Q+ D ++FVGDL+P+VTD L F V + +
Sbjct: 82 QTYNGTQMPGTELTFRLNWASFGSGQKVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSS 141
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R + A G +
Sbjct: 142 VRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQ 201
Query: 219 KQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+Q V + PE++ TT+ + NL VT +L + F L
Sbjct: 202 QQYVTKGPVPSAVAAPVQAYIAQPGQGLPPESDVTCTTISIANLDPNVTEEELKKAFSQL 261
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG+G+V++ T P A A+Q +++ + ++ SW P
Sbjct: 262 --GEIIYVKIPATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRISWSKNP 311
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 89/214 (41%), Gaps = 44/214 (20%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFS-STGPLEGCKLIKKDKS----SYGFVDYFDR 95
+ DA S++VG++ P VT+ LLQE F + G K++ + YGFV + +
Sbjct: 108 KVDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEE 167
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----YASSQREDTSGHF----------------- 133
A+ +NG + +P++++ A Q+ T G
Sbjct: 168 SERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKGPVPSAVAAPVQAYIAQPGQ 227
Query: 134 -----------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+ + +L P VT+ L FS +++ K ++G+G+V F+
Sbjct: 228 GLPPESDVTCTTISIANLDPNVTEEELKKAFSQL-----GEIIY-VKIPATKGYGYVQFK 281
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+ A+ + G+ +G + +R +W+ G
Sbjct: 282 TRPSAEEAVQKMQGQVIGQQAVRISWSKNPGQDG 315
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 22 PSLLAAPQIEPIL--SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
PS +AAP I LPP D TC ++ + N+ P VT L++ FS G + K+
Sbjct: 211 PSAVAAPVQAYIAQPGQGLPPESDV-TCTTISIANLDPNVTEEELKKAFSQLGEIIYVKI 269
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
YG+V + R SA A+ + G+ I Q ++++W+
Sbjct: 270 --PATKGYGYVQFKTRPSAEEAVQKMQGQVIGQQAVRISWS 308
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 156/322 (48%), Gaps = 25/322 (7%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK 84
+ AP +P +PP A ++++G++ + L FS TG + K+I+ +
Sbjct: 51 MWAPNAQPPQQSAVPPPSSADEVETLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQ 110
Query: 85 SS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVF 136
++ YGF+++ R A + T NG + GQ ++NWA SS +R D S + +F
Sbjct: 111 TNQSEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIF 170
Query: 137 VGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
VGDL+ +V+D L F + + A+V+ D+ TGR++G+GFV F ++ + A+ ++
Sbjct: 171 VGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQ 230
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G R +R G S + SK+ + G + EN+P TT+
Sbjct: 231 GVLCSTRPMRI-----GPASNKNLGTQTSKASYQNPQGGAQN---------ENDPNNTTI 276
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VGNL VT L + F G + V++ K GFV+++ A A+++ N +L
Sbjct: 277 FVGNLDPNVTDEHLKQVFTQY--GELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGTLL 334
Query: 316 CGKPIKCSWGSKPTPPGTSSTP 337
G+ ++ SWG P T P
Sbjct: 335 GGQNVRLSWGRSPANKQTQQDP 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 31/211 (14%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D S +++VG++ V++ L EVF + ++G K++ + YGFV + D
Sbjct: 160 RHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADE 219
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVG 138
A+ + G +P+++ A +Q E+ + +FVG
Sbjct: 220 SEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQTSKASYQNPQGGAQNENDPNNTTIFVG 279
Query: 139 DLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKW 198
+L P VTD L F+ + ++ ++ G FV F ++ A+ A+ LNG
Sbjct: 280 NLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCG------FVQFADRSSAEEALRVLNGTL 333
Query: 199 LGNRQIRCNWA---AKGATSGDEKQSSDSKS 226
LG + +R +W A T D Q + S S
Sbjct: 334 LGGQNVRLSWGRSPANKQTQQDPNQWNGSSS 364
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 154/291 (52%), Gaps = 16/291 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L FS TG + K+I+ ++ YGF++++ +A +
Sbjct: 106 KTIWVGDLLHWMDETYLHSCFSHTGEVTSVKVIRNKQTGQPEGYGFIEFYSHATAEKVLQ 165
Query: 104 TLNGRHI--FGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
NG + QP ++NWA +A +R +T ++FVGDL+ +VTDA L FS + +
Sbjct: 166 NYNGSMMPNADQPFRLNWASFAGERRTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSV 225
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A + ++
Sbjct: 226 KGAKVVTDLNTGRSKGYGFVRFGDENERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQQ 285
Query: 220 QSSDSKSVVELTNGISDGQ--EKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
Q S S+++V +G + S D NN TT++VG + S+++ DL + F
Sbjct: 286 QYS-SQALVLAGGHAPNGSMAQGSQSDGDSNN---TTIFVGGIDSDISDEDLRQPFSQF- 340
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A A+Q N + + ++ SWG P
Sbjct: 341 -GEVVSVKIPAGKGCGFVQFADRKSAEDALQSLNGTTIGKQTVRLSWGRSP 390
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 93/203 (45%), Gaps = 40/203 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTG-PLEGCKLIKK----DKSSYGFVDYFDR 95
R + + S++VG++ VT+A+LQE FSS ++G K++ YGFV + D
Sbjct: 191 RTETGSDLSIFVGDLAADVTDAMLQETFSSKYLSVKGAKVVTDLNTGRSKGYGFVRFGDE 250
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YAS------------------SQR 126
+ A++ +NG + +P+++ A Y+S SQ
Sbjct: 251 NERSRAMMEMNGVYCSSRPMRIGVATPKKSPAYQQQYSSQALVLAGGHAPNGSMAQGSQS 310
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
+ S + +FVG + +++D L FS F ++ +G GFV F +++
Sbjct: 311 DGDSNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIP------AGKGCGFVQFADRKS 364
Query: 187 AQSAINDLNGKWLGNRQIRCNWA 209
A+ A+ LNG +G + +R +W
Sbjct: 365 AEDALQSLNGTTIGKQTVRLSWG 387
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S +++VG I +++ L++ FS G + K+ GFV + DR+SA A+ +
Sbjct: 314 SNNTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGC--GFVQFADRKSAEDALQS 371
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFN 134
LNG I Q ++++W + + ++ H N
Sbjct: 372 LNGTTIGKQTVRLSWGRSPANKQWRGDHNN 401
>gi|256086132|ref|XP_002579259.1| nucleolysin tia-1 [Schistosoma mansoni]
gi|353232225|emb|CCD79580.1| putative nucleolysin tia-1 [Schistosoma mansoni]
Length = 547
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 113/197 (57%), Gaps = 17/197 (8%)
Query: 133 FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
F++FVGDL+PEV D TL A FS F T ++ +++ D T + +G+GFV++ +++A+ AI
Sbjct: 33 FHIFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIR 92
Query: 193 DLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
+NG+ +G R IR NWA + D+ + + +E+ N S
Sbjct: 93 IMNGQIIGTRAIRTNWAVR-KDPADQAKDHRPLNYLEVFNASSSTN-------------- 137
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TT+YVG +++E+T L F G I+++R+ +DKGF F+R+ +H A AI +
Sbjct: 138 TTIYVGGITNELTEKLLQDSFKQF--GEIKEIRIFKDKGFSFIRFDSHVAATQAIVTMHG 195
Query: 313 RILCGKPIKCSWGSKPT 329
+I+ + KCSWG +PT
Sbjct: 196 KIVGDQACKCSWGKEPT 212
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 100/212 (47%), Gaps = 29/212 (13%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTL 105
++VG++ P+V + L FS+ G + CK+IK + YGFV Y R+ A AI +
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH--------FN--------VFVGDLSPEVTDATL 149
NG+ I + I+ NWA + H FN ++VG ++ E+T+ L
Sbjct: 95 NGQIIGTRAIRTNWAVRKDPADQAKDHRPLNYLEVFNASSSTNTTIYVGGITNELTEKLL 154
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F + R+ D +GF F+ F + A AI ++GK +G++ +C+W
Sbjct: 155 QDSFKQFGEIKEIRIFKD------KGFSFIRFDSHVAATQAIVTMHGKIVGDQACKCSWG 208
Query: 210 AKGATS---GDEKQSSDSKSVVELTNGISDGQ 238
+ + G K+ S + V L + ++D +
Sbjct: 209 KEPTFTNKQGLAKRLSSAMFVPTLNHNMNDDR 240
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGT----IEDVRVQRDKGFGFVRYSTHPEAALAIQMG 310
++VG+L+ EV L F T I+D+ Q+ KG+GFV Y+T EA AI++
Sbjct: 35 IFVGDLAPEVQDETLLAAFSNFGTITECKIIKDMHTQKPKGYGFVAYATRQEAERAIRIM 94
Query: 311 NARILCGKPIKCSWGSKPTP 330
N +I+ + I+ +W + P
Sbjct: 95 NGQIIGTRAIRTNWAVRKDP 114
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIV 103
+ST ++YVG I ++T LLQ+ F G ++ ++ KDK + F+ + +A AIV
Sbjct: 134 SSTNTTIYVGGITNELTEKLLQDSFKQFGEIKEIRIF-KDK-GFSFIRFDSHVAATQAIV 191
Query: 104 TLNGRHIFGQPIKVNW 119
T++G+ + Q K +W
Sbjct: 192 TMHGKIVGDQACKCSW 207
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 150/295 (50%), Gaps = 28/295 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAA 99
A+ ++++VG++H + L F+STG + K+I+ ++ YGFV++ +A
Sbjct: 89 AADNKTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAE 148
Query: 100 LAIVTLNGRHIFG--QPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFS 154
+ T G + QP ++NWA S+ +R D ++FVGDL+ +VTD L FS
Sbjct: 149 KVLQTYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFS 208
Query: 155 -VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+P+ A+V++D TGRS+G+GFV F + + A+N++NG + +R +R A
Sbjct: 209 DKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRK 268
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+SG ++ G S+G S D N TT++VG L T+ DL + F
Sbjct: 269 SSGYQQ------------GGQSNG-TPSQSDTDSTN---TTIFVGGLDPSATAEDLRQPF 312
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N + + ++ SWG P
Sbjct: 313 SQY--GEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSWGRNP 365
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ VT+ +L E FS P ++ K++ + YGFV + D
Sbjct: 180 RSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDD 239
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY---------------ASSQREDTSGHFNVFVGDL 140
+ A+ +NG + +++ A SQ + S + +FVG L
Sbjct: 240 GERSKALNEMNGVFCSSRAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIFVGGL 299
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P T L FS + ++ +G GFV F N+ +A+ A+ LNG +G
Sbjct: 300 DPSATAEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTTVG 353
Query: 201 NRQIRCNWA 209
+ +R +W
Sbjct: 354 KQTVRLSWG 362
>gi|449488119|ref|XP_004157944.1| PREDICTED: uncharacterized protein LOC101229139 [Cucumis sativus]
Length = 86
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 73/84 (86%), Gaps = 2/84 (2%)
Query: 1 MQQHRLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVT 60
MQ RL+QQ MMQQ SLY HP LLAAPQIEPILSGNLPP FD+STCRSVYVGNIHPQVT
Sbjct: 1 MQYQRLRQQAMMQQ-SLYP-HPGLLAAPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVT 58
Query: 61 NALLQEVFSSTGPLEGCKLIKKDK 84
LLQEVFSS GP+EGCKLI+K+K
Sbjct: 59 EPLLQEVFSSIGPIEGCKLIRKEK 82
>gi|24650782|ref|NP_651609.1| CG34362, isoform A [Drosophila melanogaster]
gi|21464374|gb|AAM51990.1| RE10833p [Drosophila melanogaster]
gi|23172487|gb|AAF56774.2| CG34362, isoform A [Drosophila melanogaster]
gi|220947934|gb|ACL86510.1| CG34362-PA [synthetic construct]
gi|220957166|gb|ACL91126.1| CG34362-PA [synthetic construct]
Length = 505
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 269
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 270 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 326
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 327 GVHNTEINAQPVKCSWGKESGDPNNAQT 354
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 342 W---GKESGD 348
>gi|242021295|ref|XP_002431080.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Pediculus
humanus corporis]
gi|212516329|gb|EEB18342.1| Heterogeneous nuclear ribonucleoprotein A1, putative, partial
[Pediculus humanus corporis]
Length = 302
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 117/199 (58%), Gaps = 22/199 (11%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
H+++FVGDLSPE+ TL F+ F SD+RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 1 HYHIFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAI 60
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQE---KSNEDAPEN 248
+NG+WLG+R IR NWA + S+++ +DG +E +
Sbjct: 61 AAMNGRWLGSRSIRTNWATR------------KPSIIK-----ADGNTLPLSFDEVYKQT 103
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+ TVY G +++ +T + +HF GTI++++V +DKG+ FVR+ST AA AI
Sbjct: 104 SATNCTVYCGGITNGLTEELVQKHFSPY--GTIQEIKVFKDKGYAFVRFSTKESAAHAIV 161
Query: 309 MGNARILCGKPIKCSWGSK 327
+ + G+ +KCSWG +
Sbjct: 162 AVHNTEINGQTVKCSWGKE 180
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 86/183 (46%), Gaps = 27/183 (14%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ P++ L++ F+ G + ++++ ++ YGFV + + A AI +
Sbjct: 4 IFVGDLSPEIDTQTLRDAFAPFGEISDSRVVRDAQTLKSKGYGFVSFIKKSEAKSAIAAM 63
Query: 106 NGRHIFGQPIKVNWA-----------------YASSQREDTSGHFNVFVGDLSPEVTDAT 148
NGR + + I+ NWA + ++ ++ + V+ G ++ +T+
Sbjct: 64 NGRWLGSRSIRTNWATRKPSIIKADGNTLPLSFDEVYKQTSATNCTVYCGGITNGLTEEL 123
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
+ FS + T + +V D +G+ FV F +E A AI ++ + + ++C+W
Sbjct: 124 VQKHFSPYGTIQEIKVFKD------KGYAFVRFSTKESAAHAIVAVHNTEINGQTVKCSW 177
Query: 209 AAK 211
+
Sbjct: 178 GKE 180
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 149/285 (52%), Gaps = 27/285 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ P + + + F++TG ++ KLI+ +S YGFV++ R +A +
Sbjct: 39 KTLWIGDLQPWMDESYIYNCFAATGEVQSVKLIRDKQSGQLQGYGFVEFTSRAAADRILQ 98
Query: 104 TLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCS 160
T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 99 TYNGQMMPNVEMVFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPSVK 157
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G +++
Sbjct: 158 GAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMLCSSRPMRIGPAANKKTTGVQER 217
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
+++ EN+P TT++VG L VT L + F G
Sbjct: 218 VPNAQGA-----------------QSENDPNNTTIFVGGLDPNVTEDVLKQVFAPY--GE 258
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ V++ K GFV+Y P A A+ + ++ G+ ++ SWG
Sbjct: 259 VVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGTLIGGQNVRLSWG 303
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+ L G
Sbjct: 234 TIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRC--GFVQYVNRPSAEQALAVLQGT 291
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 292 LIGGQNVRLSWGRSLSNKQ 310
>gi|442621497|ref|NP_001263033.1| CG34362, isoform F [Drosophila melanogaster]
gi|440217979|gb|AGB96413.1| CG34362, isoform F [Drosophila melanogaster]
Length = 498
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 269
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 270 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 326
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 327 GVHNTEINAQPVKCSWGKESGDPNNAQT 354
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 342 W---GKESGD 348
>gi|195574475|ref|XP_002105214.1| GD21364 [Drosophila simulans]
gi|194201141|gb|EDX14717.1| GD21364 [Drosophila simulans]
Length = 496
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 163 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 222
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 223 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 267
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 268 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 324
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 325 GVHNTEINAQPVKCSWGKESGDPNNAQT 352
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 166 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 225
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 226 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 285
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 286 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 339
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 340 W---GKESGD 346
>gi|194907035|ref|XP_001981474.1| GG11588 [Drosophila erecta]
gi|190656112|gb|EDV53344.1| GG11588 [Drosophila erecta]
Length = 502
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 169 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 228
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 229 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 273
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 274 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 330
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 331 GVHNTEINAQPVKCSWGKESGDPNNAQT 358
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 172 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 231
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 232 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 291
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 292 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 345
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 346 W---GKESGD 352
>gi|195503598|ref|XP_002098718.1| GE23777 [Drosophila yakuba]
gi|194184819|gb|EDW98430.1| GE23777 [Drosophila yakuba]
Length = 543
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 21/210 (10%)
Query: 130 SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQS 189
S F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+S
Sbjct: 208 SEQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAES 267
Query: 190 AINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN 249
AI +NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 268 AITAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN- 314
Query: 250 PQYTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A A
Sbjct: 315 ---CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHA 369
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSST 336
I + + +P+KCSWG + P + T
Sbjct: 370 IVGVHNTEINAQPVKCSWGKESGDPNNAQT 399
>gi|356541997|ref|XP_003539458.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 17/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L + F+ +G + K+I+ + YGFV++ SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 103 VTLNGRHIFG--QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + G Q ++NWA D S +FVGDL+P+VTD L F +P+
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFGDSGPDHS----IFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
++V+ D TGRS+G+GFV F ++ A+ ++NG + R +R + A + +
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + K++ + + + APEN+ TTV +GNL VT +L + F + G
Sbjct: 185 QYAPPKAMYQFPAYTA----PVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAF--VQFG 238
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I V++ KG+G+V++ T A AIQ +++ + I+ SWGS T
Sbjct: 239 DIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLT 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 38/200 (19%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRS 97
D+ S++VG++ P VT+ +LQE F + P ++G K++ + YGFV + D
Sbjct: 92 DSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQ 151
Query: 98 AALAIVTLNGRHIFGQPIKVNWAY----ASSQR-----------------------EDTS 130
A+ +NG + +P++++ A AS Q E+
Sbjct: 152 RNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDV 211
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
+ V +G+L VT+ L F F ++ +G+G+V F + A+ A
Sbjct: 212 NNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIY------AGKGYGYVQFGTRASAEDA 265
Query: 191 INDLNGKWLGNRQIRCNWAA 210
I + GK +G + I+ +W +
Sbjct: 266 IQRMQGKVIGQQVIQISWGS 285
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V +GN+ VT L++ F G + K+ YG+V + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAG--KGYGYVQFGTRASAEDAIQRMQGK 272
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
I Q I+++W + R+ ++ + G
Sbjct: 273 VIGQQVIQISWGSTLTARQMDPSQWSAYYG 302
>gi|356541995|ref|XP_003539457.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 149/290 (51%), Gaps = 17/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L + F+ +G + K+I+ + YGFV++ SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHSGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 103 VTLNGRHIFG--QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + G Q ++NWA D S +FVGDL+P+VTD L F +P+
Sbjct: 69 RTFNGAQMPGTDQTFRLNWASFGDSGPDHS----IFVGDLAPDVTDFILQETFRAHYPSV 124
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
++V+ D TGRS+G+GFV F ++ A+ ++NG + R +R + A + +
Sbjct: 125 KGSKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + K++ + + + APEN+ TTV +GNL VT +L + F + G
Sbjct: 185 QYAPPKAMYQFPAYTA----PVSTVAPENDVNNTTVCIGNLDLNVTEEELKQAF--VQFG 238
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I V++ KG+G+V++ T A AIQ +++ + I+ SWGS T
Sbjct: 239 DIVLVKIYAGKGYGYVQFGTRASAEDAIQRMQGKVIGQQVIQISWGSTLT 288
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 38/200 (19%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRS 97
D+ S++VG++ P VT+ +LQE F + P ++G K++ + YGFV + D
Sbjct: 92 DSGPDHSIFVGDLAPDVTDFILQETFRAHYPSVKGSKVVTDPATGRSKGYGFVKFADEAQ 151
Query: 98 AALAIVTLNGRHIFGQPIKVNWAY----ASSQR-----------------------EDTS 130
A+ +NG + +P++++ A AS Q E+
Sbjct: 152 RNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFPAYTAPVSTVAPENDV 211
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
+ V +G+L VT+ L F F ++ +G+G+V F + A+ A
Sbjct: 212 NNTTVCIGNLDLNVTEEELKQAFVQFGDIVLVKIY------AGKGYGYVQFGTRASAEDA 265
Query: 191 INDLNGKWLGNRQIRCNWAA 210
I + GK +G + I+ +W +
Sbjct: 266 IQRMQGKVIGQQVIQISWGS 285
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V +GN+ VT L++ F G + K+ YG+V + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQAFVQFGDIVLVKIYAG--KGYGYVQFGTRASAEDAIQRMQGK 272
Query: 109 HIFGQPIKVNWAYASSQREDTSG 131
I Q I+++W + R+D G
Sbjct: 273 VIGQQVIQISWGSTLTARQDVPG 295
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 152/292 (52%), Gaps = 25/292 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
+S+++G++ + L +FS TG + K+I+ ++ YGF+++ +R +A +
Sbjct: 65 IKSLWIGDLQQWMDEGYLFNIFSGTGEVVSAKVIRNKQTGMPEGYGFIEFINRAAAERIL 124
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
T NG + Q ++NWA A +R+D + VFVGDL+P+V D L F +V+P
Sbjct: 125 QTYNGTQMPNTEQNFRLNWATLAAGERRQDDGPDYTVFVGDLAPDVNDFILQETFRTVYP 184
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D+ TGR++G+GFV F ++ + + A+ ++NG++ R +R AA +
Sbjct: 185 SVKGAKVVTDRLTGRTKGYGFVRFGDENEQRRAMVEMNGQYCSTRAMRIGPAATKKPAVQ 244
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q + +S + T G EN+P TT++VG L V+ L + F
Sbjct: 245 QYQKAPYQS-TQGTQG-------------ENDPNNTTIFVGALDPSVSDEHLRQVFGKY- 289
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+ N L G+ I+ SWG P+
Sbjct: 290 -GELVHVKIPAGKRCGFVQFANRACAEQALLGLNGTQLAGQSIRLSWGRSPS 340
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P V++ L++VF G L K+ + GFV + +R A A++ LNG
Sbjct: 267 TIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRC--GFVQFANRACAEQALLGLNGT 324
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ I+++W + S ++
Sbjct: 325 QLAGQSIRLSWGRSPSNKQ 343
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 153/287 (53%), Gaps = 14/287 (4%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ + + L FS G + K+I+ ++ YGFV++ +A +
Sbjct: 84 KTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQ 143
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+ NG + QP ++NWA S+ +R +T F++FVGDL+ +VTD L F S +P+
Sbjct: 144 SYNGTMMPNAEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPS 203
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TG S+G+GFV F ++ + A+ ++NG + +R +R A S +
Sbjct: 204 LKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAQQ 263
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ SS + V L+ G + ++ + + TT++VG L S+VT +L + F+
Sbjct: 264 QYSSQA---VILSGGYASNGAATHGSQSDGDASNTTIFVGGLDSDVTDEELRQSFNQF-- 318
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ KG GFV++S A AIQ + I+ + ++ SWG
Sbjct: 319 GEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWG 365
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAI 102
DAS +++VG + VT+ L++ F+ G + K+ GFV + DR SA AI
Sbjct: 291 DASNT-TIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGC--GFVQFSDRSSAQEAI 347
Query: 103 VTLNGRHIFGQPIKVNWAYASSQ--REDTSGHFN 134
L+G I Q ++++W +++ R D+ +N
Sbjct: 348 QKLSGAIIGKQAVRLSWGRTANKQMRADSGSQWN 381
>gi|343427062|emb|CBQ70590.1| related to PUB1-major polyadenylated RNA-binding protein of nucleus
and cytoplasm [Sporisorium reilianum SRZ2]
Length = 404
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 149/323 (46%), Gaps = 69/323 (21%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAALAIVTLN 106
V+V N+ T +E+F + G ++ K++ + +YGFV+Y D SA A+ T++
Sbjct: 7 VHVANLPATTTE---RELFGALGAVQTAKVVSTRAAGGLAYGFVEYGDVASAERAVRTMD 63
Query: 107 GRHIFGQPIKVNWAYASSQREDTSG----------------HFNVFVGDLSPEVTDATLF 150
G PIKV WA S + + ++FVGDL+P+V DA +
Sbjct: 64 AWLWLGTPIKVCWARHSMHPDAVEAAEAERAGGMRGGAAAGNSHLFVGDLAPDVDDAVVH 123
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A FS F + +D RVM+D +TG+SRGFGF+S R++ +A+ I G+WLG RQIR NWA+
Sbjct: 124 AFFSRFASLADVRVMYDPETGKSRGFGFISLRSKSEAEECIAVTQGRWLGGRQIRVNWAS 183
Query: 211 K---------------GATSG---------DEKQSS---------DSKSVVELTNGISDG 237
+ G S ++Q+ D+ S L
Sbjct: 184 QKNQGQAAAAVPPAATGMVSSASPHPDPSYTQRQTGYTSPSTPTFDTPSTTPLLPR-RHT 242
Query: 238 QEKSNEDAPENNPQY-----------TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
S P + P Y T+VYVGN+S T DL R F G + R+
Sbjct: 243 TLASAPRLPASTPTYDQILASAPSTQTSVYVGNISPHTTPQDLVRIFAPFNHGQRVEARI 302
Query: 287 QRD--KGFGFVRYSTHPEAALAI 307
+G+GFV ++H +AA AI
Sbjct: 303 PPPPGRGYGFVTLTSHAQAASAI 325
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 29/200 (14%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V V +L T+ LF T A+V+ + G +GFV + + A+ A+ +
Sbjct: 7 VHVANLPATTTERELFGALGAVQT---AKVVSTRAAG-GLAYGFVEYGDVASAERAVRTM 62
Query: 195 NG-KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+ WLG I+ WA D+ E + + +
Sbjct: 63 DAWLWLGT-PIKVCWA-------RHSMHPDAVEAAEAERAGGMRGGAAAGN--------S 106
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
++VG+L+ +V +H F ++ DVRV D +GFGF+ + EA I
Sbjct: 107 HLFVGDLAPDVDDAVVHAFFSRFA--SLADVRVMYDPETGKSRGFGFISLRSKSEAEECI 164
Query: 308 QMGNARILCGKPIKCSWGSK 327
+ R L G+ I+ +W S+
Sbjct: 165 AVTQGRWLGGRQIRVNWASQ 184
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 17/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L + F+ G + K+I+ + YGFV++ SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 103 VTLNGRHIFG--QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + G Q ++NWA D S +FVGDL+P+VTD L F +P+
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFGDSGPDHS----IFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D TGRS+G+GFV F ++ A+ ++NG + R +R + A + +
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + K++ + + + APEN+ TTV +GNL VT +L + F + G
Sbjct: 185 QYAPPKAMYQFPAYSA----PVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTF--MQFG 238
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I V++ KG+G+V++ T A AIQ +++ + I+ SWGS T
Sbjct: 239 DIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMT 288
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 28 PQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS- 85
P E N D+ S++VG++ P VT+ LLQE F + P ++G K++ +
Sbjct: 77 PGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATG 136
Query: 86 ---SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAY----ASSQR------------ 126
YGFV + D A+ +NG + +P++++ A AS Q
Sbjct: 137 RSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFP 196
Query: 127 -----------EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
E+ + V +G+L VT+ L F F ++ +G
Sbjct: 197 AYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIY------AGKG 250
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+G+V F + A+ AI + GK +G + I+ +W +
Sbjct: 251 YGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGS 285
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V +GN+ VT L++ F G + K+ YG+V + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAG--KGYGYVQFGTRVSAEDAIQRMQGK 272
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
I Q I+++W + + R+ ++ + G
Sbjct: 273 VIGQQVIQISWGSSMTARQMDPSQWSAYYG 302
>gi|156358574|ref|XP_001624592.1| predicted protein [Nematostella vectensis]
gi|156211382|gb|EDO32492.1| predicted protein [Nematostella vectensis]
Length = 235
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 132/251 (52%), Gaps = 21/251 (8%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD--KSSYGFVDYFDRRSAALAIVTLNGR 108
YVGN+ P+ T L+ +F+ + CK+I K Y FV++ A A ++ R
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMINSVSYKGPYCFVEFETHADAQEAKFRMDQR 60
Query: 109 HIFGQPIKVNWA--YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
+ + +KVNWA + +R DT+ HF++FVGDL+ V +A L F F S+ RV+
Sbjct: 61 TVMDKKLKVNWATNHPGMKRGDTNNHFHIFVGDLAENVDNALLRKTFEPFGEISEVRVVK 120
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D +S+GFGFVSF +EDA AI +++ +G +Q++ NWAA+ K +
Sbjct: 121 DPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAAR-------KNNPTQSK 173
Query: 227 VVELTNGISDGQEKSNEDAPENNPQY-TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVR 285
V + N + D D + Q TTVYVGNL +V +L + F G+I + +
Sbjct: 174 YVCVKNLLWD-------DVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQY--GSILETK 224
Query: 286 VQRDKGFGFVR 296
V DKG+ F++
Sbjct: 225 VFADKGYAFIK 235
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 56/207 (27%)
Query: 3 QHRLKQQTMMQQQSLYQY---HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQV 59
+ R+ Q+T+M ++ + HP + R D + ++VG++ V
Sbjct: 54 KFRMDQRTVMDKKLKVNWATNHPGM---------------KRGDTNNHFHIFVGDLAENV 98
Query: 60 TNALLQEVFSSTGPLEGCKLIK---KDKSS-YGFVDYFDRRSAALAIVTLNGRHIFGQPI 115
NALL++ F G + +++K K+KS +GFV + R AA AI ++ I G+ +
Sbjct: 99 DNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 158
Query: 116 KVNWA-----------------------YASSQREDTSGHFNVFVGDLSPEVTDATLFAC 152
K NWA + SSQ T V+VG+L P+V D L
Sbjct: 159 KTNWAARKNNPTQSKYVCVKNLLWDDVFHQSSQLNTT-----VYVGNLPPDVKDYELQQM 213
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFV 179
FS + + + +V D +G+ F+
Sbjct: 214 FSQYGSILETKVFAD------KGYAFI 234
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 43/207 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+ T + + F+ +++ + FV F DAQ A ++
Sbjct: 1 YVGNLDPKCTQELICSIFNKIAKVVRCKMI--NSVSYKGPYCFVEFETHADAQEAKFRMD 58
Query: 196 GKWLGNRQIRCNWAAK--GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+ + +++++ NWA G GD TN +
Sbjct: 59 QRTVMDKKLKVNWATNHPGMKRGD-------------TNN------------------HF 87
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
++VG+L+ V + L + F G I +VRV +D KGFGFV + +AA AI
Sbjct: 88 HIFVGDLAENVDNALLRKTFEPF--GEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAI 145
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTS 334
++ + GK +K +W ++ P S
Sbjct: 146 AEMDSVTIGGKQVKTNWAARKNNPTQS 172
>gi|402589265|gb|EJW83197.1| RNA recognition domain-containing protein, partial [Wuchereria
bancrofti]
Length = 231
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 17/201 (8%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
S + DTS +++VFVGDLS EV + TL A F F S+A+V+ D +T +S+G+GFVSF
Sbjct: 12 SPKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPV 71
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+E+AQ AI ++NG+ +G RQIR NWA + G+E + I + +N
Sbjct: 72 KENAQKAIEEMNGQMIGRRQIRTNWAVRRFDGGEENAMKPP-----TYDNIFNATHAAN- 125
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
T+VYVG +S T +L + F A + T+ +VR+ + +G+ FVRY A
Sbjct: 126 ---------TSVYVGGISPVTTDEELMQSFSA--IATVIEVRLFKQQGYAFVRYLNKDAA 174
Query: 304 ALAIQMGNARILCGKPIKCSW 324
A AI N +++ G+ I+CSW
Sbjct: 175 ARAIMSMNGKVINGQKIRCSW 195
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ D S V+VG++ +V N L+ F S G + K+I+ ++ YGFV + +
Sbjct: 13 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISEAKVIRDPQTLKSKGYGFVSFPVK 72
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----------------YASSQREDTSGHFNVFVGD 139
+A AI +NG+ I + I+ NWA Y + + + +V+VG
Sbjct: 73 ENAQKAIEEMNGQMIGRRQIRTNWAVRRFDGGEENAMKPPTYDNIFNATHAANTSVYVGG 132
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+SP TD L FS T + R+ Q G+ FV + N++ A AI +NGK +
Sbjct: 133 ISPVTTDEELMQSFSAIATVIEVRLFKQQ------GYAFVRYLNKDAAARAIMSMNGKVI 186
Query: 200 GNRQIRCNWAAKGATSGD 217
++IRC+W+ + D
Sbjct: 187 NGQKIRCSWSRTAMDNND 204
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS+EV + L F + G I + +V RD KG+GFV + A AI+
Sbjct: 23 VFVGDLSTEVNNCTLKAAFESF--GEISEAKVIRDPQTLKSKGYGFVSFPVKENAQKAIE 80
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPLPP 340
N +++ + I+ +W + G + PP
Sbjct: 81 EMNGQMIGRRQIRTNWAVRRFDGGEENAMKPP 112
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 148/290 (51%), Gaps = 17/290 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L + F+ G + K+I+ + YGFV++ SA +
Sbjct: 9 VRTLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFL 68
Query: 103 VTLNGRHIFG--QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + G Q ++NWA D S +FVGDL+P+VTD L F +P+
Sbjct: 69 RTYNGAQMPGTEQTFRLNWASFGDSGPDHS----IFVGDLAPDVTDFLLQETFRAHYPSV 124
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D TGRS+G+GFV F ++ A+ ++NG + R +R + A + +
Sbjct: 125 KGAKVVTDPATGRSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQH 184
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q + K++ + + + APEN+ TTV +GNL VT +L + F + G
Sbjct: 185 QYAPPKAMYQFPAYSA----PVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTF--MQFG 238
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I V++ KG+G+V++ T A AIQ +++ + I+ SWGS T
Sbjct: 239 DIVLVKIYAGKGYGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGSSMT 288
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 28 PQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS- 85
P E N D+ S++VG++ P VT+ LLQE F + P ++G K++ +
Sbjct: 77 PGTEQTFRLNWASFGDSGPDHSIFVGDLAPDVTDFLLQETFRAHYPSVKGAKVVTDPATG 136
Query: 86 ---SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAY----ASSQR------------ 126
YGFV + D A+ +NG + +P++++ A AS Q
Sbjct: 137 RSKGYGFVKFADEAQRNRAMTEMNGVYCSTRPMRISAATPKKNASFQHQYAPPKAMYQFP 196
Query: 127 -----------EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
E+ + V +G+L VT+ L F F ++ +G
Sbjct: 197 AYSAPVSAVAPENDVNNTTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIY------AGKG 250
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
+G+V F + A+ AI + GK +G + I+ +W +
Sbjct: 251 YGYVQFGTRVSAEDAIQRMQGKVIGQQVIQISWGS 285
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V +GN+ VT L++ F G + K+ YG+V + R SA AI + G+
Sbjct: 215 TVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAG--KGYGYVQFGTRVSAEDAIQRMQGK 272
Query: 109 HIFGQPIKVNWAYASSQREDTSGHFNV 135
I Q I+++W + + R+D G + V
Sbjct: 273 VIGQQVIQISWGSSMTARQDVPGGWGV 299
>gi|442621495|ref|NP_001263032.1| CG34362, isoform E [Drosophila melanogaster]
gi|440217978|gb|AGB96412.1| CG34362, isoform E [Drosophila melanogaster]
Length = 509
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 165 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 224
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 225 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 269
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 270 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 326
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 327 GVHNTEINAQPVKCSWGKESGDPNNAQT 354
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 168 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 227
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 228 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 287
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 288 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 341
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 342 W---GKESGD 348
>gi|50548145|ref|XP_501542.1| YALI0C07040p [Yarrowia lipolytica]
gi|49647409|emb|CAG81845.1| YALI0C07040p [Yarrowia lipolytica CLIB122]
Length = 606
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 100/164 (60%), Gaps = 8/164 (4%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAIVTLN 106
+YV + V ++L ++F TGP++ K+ +K ++ F++Y D+ +A LA+ TLN
Sbjct: 257 LYVAGVDASVKESILLDLFKVTGPIKSIKIFPDRQKANINFAFIEYEDKEAAQLAMQTLN 316
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
R I GQ I V++A+ + D +N+FVGDL +V D L F+ P DARVMW
Sbjct: 317 NRQIHGQEISVSFAFQTKVERD----YNLFVGDLGADVNDEMLHKHFAHIPGLLDARVMW 372
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
D TGRSRG+GFVSF ++ A+ + + NG LG+R IR NWA+
Sbjct: 373 DMTTGRSRGYGFVSFETKQGAERGLIE-NGSVLGSRVIRANWAS 415
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 43/197 (21%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++V + V ++ L F V ++ D++ F F+ + ++E AQ A+ L
Sbjct: 257 LYVAGVDASVKESILLDLFKVTGPIKSIKIFPDRQKANIN-FAFIEYEDKEAAQLAMQTL 315
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + + ++I ++A Q K D
Sbjct: 316 NNRQIHGQEISVSFAF---------------------------QTKVERDY--------N 340
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIE-----DVRVQRDKGFGFVRYSTHPEAALAIQM 309
++VG+L ++V LH+HF A G ++ D+ R +G+GFV + T A + +
Sbjct: 341 LFVGDLGADVNDEMLHKHF-AHIPGLLDARVMWDMTTGRSRGYGFVSFETKQGAERGL-I 398
Query: 310 GNARILCGKPIKCSWGS 326
N +L + I+ +W S
Sbjct: 399 ENGSVLGSRVIRANWAS 415
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 48 RSVYVGNI---HPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
++VY+GN+ HP LLQ G + K S+Y FV Y + A +A++
Sbjct: 535 KTVYIGNLPNMHPSELIPLLQNF--------GYVVEFKHHSNYAFVSYDSHKRAQIAMMQ 586
Query: 105 LNGRHIFGQPIKVNWA 120
LNG +I G+ +K W
Sbjct: 587 LNGYNIHGRTLKCGWG 602
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 148/290 (51%), Gaps = 23/290 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGP--LEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
RS+++G++ + A L F+ GP + K+I+ ++ YGF+++ R +A
Sbjct: 113 IRSLWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAEY 172
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
A+ + NG + P K+NWA AS+ +R D +FVGDL+ +VTD+ L F
Sbjct: 173 ALASFNGHAMPNVDLPFKLNWASASAGDRRGDDGSDHTIFVGDLASDVTDSMLQEIFKAS 232
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A V+ D+ TGRS+G+GFV F + + A+ ++NG L +RQ+R AA
Sbjct: 233 YPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTRAMTEMNGVTLSSRQLRIGPAANKKNM 292
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
G ++ S TNG + N+ +N+P TT++VG L S + L + F
Sbjct: 293 GTQQTYS--------TNGYQSQSSQGND--VQNDPNNTTIFVGGLDSNIDENYLRQVF-- 340
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ K GFV++++ A AI N + G ++ SWG
Sbjct: 341 TPYGEVGYVKIPVGKRCGFVQFTSRSCAEEAINALNGTPIGGNNVRLSWG 390
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 85/195 (43%), Gaps = 32/195 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R D + +++VG++ VT+++LQE+F ++ P + G ++ + YGFV + D
Sbjct: 202 RGDDGSDHTIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDV 261
Query: 96 RSAALAIVTLNGRHIFGQPIKV------------------NWAYASSQREDTSGHFN--- 134
A+ +NG + + +++ + SSQ D N
Sbjct: 262 NEQTRAMTEMNGVTLSSRQLRIGPAANKKNMGTQQTYSTNGYQSQSSQGNDVQNDPNNTT 321
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG L + + L F+ + ++ ++ GFV F ++ A+ AIN L
Sbjct: 322 IFVGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRC------GFVQFTSRSCAEEAINAL 375
Query: 195 NGKWLGNRQIRCNWA 209
NG +G +R +W
Sbjct: 376 NGTPIGGNNVRLSWG 390
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVF--PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN 192
+++GDL + +A L F+ + +++ +++TG+ G+GF+ F ++ A+ A+
Sbjct: 116 LWIGDLQYWMDEAYLHNAFAPMGPQQVASVKIIRNKQTGQPEGYGFIEFHSRAAAEYALA 175
Query: 193 DLNGKWLGNRQI--RCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNP 250
NG + N + + NWA+ A++GD + G + S+
Sbjct: 176 SFNGHAMPNVDLPFKLNWAS--ASAGDRR-----------------GDDGSDH------- 209
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHA-----LCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
T++VG+L+S+VT L F A + D R KG+GFVR+ E
Sbjct: 210 ---TIFVGDLASDVTDSMLQEIFKASYPSVRGANVVTDRATGRSKGYGFVRFGDVNEQTR 266
Query: 306 AIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
A+ N L + ++ + GT T
Sbjct: 267 AMTEMNGVTLSSRQLRIGPAANKKNMGTQQT 297
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 17/310 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLE-GCKLIKKDKSS----YGFVDYFDRRSAALA 101
++++VG++ + LQ FSS G + K+I+ ++ YGFV+ R SA
Sbjct: 50 IKTLWVGDLQYWMDENYLQTCFSSNGEVVVSVKIIRNKQTGQPEGYGFVELDSRASAERI 109
Query: 102 IVTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
+ TL+G + P ++NWA A +R + +++FVGDL PEV D L F S +
Sbjct: 110 LQTLHGTPMPNSPHPFRLNWATFGAGDRRTEPGTGYSIFVGDLGPEVIDILLQETFQSRY 169
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ D TGR++G+GFV F ++ + A+ ++NG + +R +R N A + G
Sbjct: 170 SSVKSAKVVIDANTGRTKGYGFVRFGDENEKNRAMTEMNGVYCCSRPMRINEATPKKSLG 229
Query: 217 -DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+ S + G GQ +++ P N TT++VG L T DL + F
Sbjct: 230 LQQSYSMKGNYYTQAYGGAVAGQGFQSDNDPNN----TTIFVGGLDPNATDEDLRQVFGP 285
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSS 335
G I V++ KG GFV+++ A A+Q + I+ + I+ SWG P T+S
Sbjct: 286 F--GEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGTIIGQQSIRLSWGRSPANKQTAS 343
Query: 336 TPLPPPPAPH 345
+ P P P+
Sbjct: 344 WGVQPQPDPN 353
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + T S++VG++ P+V + LLQE F S ++ K++ + YGFV + D
Sbjct: 138 RTEPGTGYSIFVGDLGPEVIDILLQETFQSRYSSVKSAKVVIDANTGRTKGYGFVRFGDE 197
Query: 96 RSAALAIVTLNGRHIFGQPIKVN----------------------WAYASS------QRE 127
A+ +NG + +P+++N AY + Q +
Sbjct: 198 NEKNRAMTEMNGVYCCSRPMRINEATPKKSLGLQQSYSMKGNYYTQAYGGAVAGQGFQSD 257
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ + +FVG L P TD L F F ++ +G GFV F N+ A
Sbjct: 258 NDPNNTTIFVGGLDPNATDEDLRQVFGPFGEIVYVKIP------VGKGCGFVQFTNRSSA 311
Query: 188 QSAINDLNGKWLGNRQIRCNWA 209
+ A+ L+G +G + IR +W
Sbjct: 312 EEALQKLHGTIIGQQSIRLSWG 333
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 153/302 (50%), Gaps = 23/302 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAI 102
++++VG++ + L FS T + K+I+ ++ YGFV++ R +A A+
Sbjct: 123 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 182
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFS-VF 156
+ +G + QP ++NWA S+ + S + ++FVGDL+P+V+DA L F+ +
Sbjct: 183 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 242
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA--KGAT 214
P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +RQ+R A + A
Sbjct: 243 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 302
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
G + S LT G S D NN +T++VG L ++VT DL + F
Sbjct: 303 YGQQNGSQ------ALTLAGGHGGNGSLSDGESNN---STIFVGGLDADVTEEDLMQPFS 353
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTS 334
G + V++ KG GFV+++ A AI N ++ ++ SWG P S
Sbjct: 354 QF--GEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRS 411
Query: 335 ST 336
T
Sbjct: 412 DT 413
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 150/290 (51%), Gaps = 22/290 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++ +G++H + L F+STG + K+I+ ++ YGFV++F +A +
Sbjct: 96 KTICIGDLHHWMDENYLHTCFASTGEIASIKVIRSKQTGLSEGYGFVEFFTHATAEKVLQ 155
Query: 104 TLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + QP ++NWA S+ +R D + ++FVGDL+ +VTD+ L F S + +
Sbjct: 156 NYGGILMPNTEQPFRLNWATFSTGDKRSDNTPDLSIFVGDLAADVTDSLLQETFASKYQS 215
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + + A+ ++NG + +R +R A +SG +
Sbjct: 216 VKSAKVVFDANTGRSKGYGFVRFGDDTERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 275
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+Q +NG S +S+ D+ T++VG L VT DL + F
Sbjct: 276 QQGGYG------SNGASSQGFQSDGDSSN-----ATIFVGGLDPNVTDEDLKQPFSQY-- 322
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 323 GEIVSVKIPVSKGCGFVQFANRNNAEEALQKLNGTVIGKQTVRLSWGRNP 372
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 34/211 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R D + S++VG++ VT++LLQE F+S ++ K++ + YGFV + D
Sbjct: 182 RSDNTPDLSIFVGDLAADVTDSLLQETFASKYQSVKSAKVVFDANTGRSKGYGFVRFGDD 241
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------YASS-------QREDTSGHFNV 135
A+ +NG + +P+++ A Y S+ Q + S + +
Sbjct: 242 TERTQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQGGYGSNGASSQGFQSDGDSSNATI 301
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVG L P VTD L FS + ++ S+G GFV F N+ +A+ A+ LN
Sbjct: 302 FVGGLDPNVTDEDLKQPFSQYGEIVSVKIP------VSKGCGFVQFANRNNAEEALQKLN 355
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
G +G + +R +W G G ++ +D S
Sbjct: 356 GTVIGKQTVRLSW---GRNPGHKQHRADFSS 383
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 151/294 (51%), Gaps = 23/294 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAI 102
++++VG++ + L FS T + K+I+ ++ YGFV++ R +A A+
Sbjct: 118 VKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEAL 177
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFS-VF 156
+ +G + QP ++NWA S+ + S + ++FVGDL+P+V+DA L F+ +
Sbjct: 178 QSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRY 237
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA--KGAT 214
P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +RQ+R A + A
Sbjct: 238 PSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAA 297
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
G + S LT G S D NN +T++VG L ++VT DL + F
Sbjct: 298 YGQQNGSQ------ALTLAGGHGGNGSMSDGESNN---STIFVGGLDADVTEEDLMQPFS 348
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A AI N ++ ++ SWG P
Sbjct: 349 DF--GEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP 400
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
S +++VG + VT L + FS G + K+ + K GFV + +R+SA AI
Sbjct: 324 SNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGK---GCGFVQFANRQSAEEAIG 380
Query: 104 TLNGRHIFGQPIKVNWAYASSQ--REDTSGHFN 134
LNG I ++++W + ++ R D+ +N
Sbjct: 381 NLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWN 413
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 24/296 (8%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
+A R++++G++ + + F+ TG + K+I+ ++ YGF+++ +A
Sbjct: 84 NADEVRTLWIGDLQYWMDENYINSCFAHTGEVTSVKVIRNKQTGQVEGYGFIEFGSHGTA 143
Query: 99 ALAIVTLNGRHIFG--QPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
+ T NG + Q ++NWA ++ + D + F +FVGDL+ +VTD L F V
Sbjct: 144 ERILQTYNGTPMPNGEQNFRLNWASFSGGDKRDDTPDFTIFVGDLAADVTDYILQDTFRV 203
Query: 156 -FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGA 213
+P+ A+V+ D+ TGR++G+GFV F ++ + A+ D+NG + R +R A K A
Sbjct: 204 HYPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTDMNGAFCSTRPMRIGLATNKNA 263
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+G + + Q + EN+P TT++VGNL S VT +L F
Sbjct: 264 VTGQQYPKASY-------------QNSQTQGENENDPNNTTIFVGNLDSNVTDDNLRELF 310
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+++ N L G+ I+ SWG P+
Sbjct: 311 GRY--GQLLHVKIPAGKRCGFVQFADRSCAEEALRLLNGTSLSGQSIRLSWGRSPS 364
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ VT+ L+E+F G L K+ + GFV + DR A A+ LNG
Sbjct: 291 TIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRC--GFVQFADRSCAEEALRLLNGT 348
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ I+++W + S ++
Sbjct: 349 SLSGQSIRLSWGRSPSNKQ 367
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 143/292 (48%), Gaps = 36/292 (12%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAA 99
DA T ++++G + P + A ++ V+ G K+I+ + Y FVD F +AA
Sbjct: 41 DAKT--TLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSGNAGYCFVD-FSSPAAA 97
Query: 100 LAIVTLNGRHIFG--QPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACF- 153
+TLN I G +P K+NWA + +R+D +++FVGDL PEV + L + F
Sbjct: 98 AKALTLNATPIPGSSRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQ 157
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S FP+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 158 SRFPSCKSAKIMTDPVSGMSRGYGFVRFSDEMDQQRALTEMQGVYCGNRPMRISTATP-- 215
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
K ++ + + T +P TTV+VG LS VT +L F
Sbjct: 216 ---KNKSATGGPPMNQFT-----------------DPNNTTVFVGGLSGYVTEDELRSFF 255
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 256 QGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 305
>gi|108383479|gb|ABF85732.1| IP09238p [Drosophila melanogaster]
Length = 791
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 451 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 510
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 511 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 555
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 556 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 612
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 613 GVHNTEINAQPVKCSWGKESGDPNNAQT 640
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 454 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 513
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 514 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 573
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 574 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 627
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 628 W---GKESGD 634
>gi|442621493|ref|NP_001163754.2| CG34362, isoform D, partial [Drosophila melanogaster]
gi|440217977|gb|ACZ95048.2| CG34362, isoform D, partial [Drosophila melanogaster]
Length = 799
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 459 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 518
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 519 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 563
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 564 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 620
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 621 GVHNTEINAQPVKCSWGKESGDPNNAQT 648
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 636 W---GKESGD 642
>gi|442621490|ref|NP_001097951.2| CG34362, isoform B, partial [Drosophila melanogaster]
gi|440217976|gb|AAF56772.4| CG34362, isoform B, partial [Drosophila melanogaster]
Length = 792
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 21/208 (10%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A+SAI
Sbjct: 459 QFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAI 518
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + K + +++ LT E N+ +P N
Sbjct: 519 TAMNGQWLGSRSIRTNWATR-------KPPASKENIKPLTF-----DEVYNQSSPSN--- 563
Query: 252 YTTVYVGNLSSEVTSVD---LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
TVYVG ++S +T++ L + F G I+++RV +DKG+ FVR+ST A AI
Sbjct: 564 -CTVYVGGVNSALTALSEEVLQKTFAPY--GAIQEIRVFKDKGYAFVRFSTKEAATHAIV 620
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ + +P+KCSWG + P + T
Sbjct: 621 GVHNTEINAQPVKCSWGKESGDPNNAQT 648
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 31/190 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 462 IFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFIKKSEAESAITAM 521
Query: 106 NGRHIFGQPIKVNWA---------------YASSQREDTSGHFNVFVGDLSPEVT---DA 147
NG+ + + I+ NWA + + + + V+VG ++ +T +
Sbjct: 522 NGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTVYVGGVNSALTALSEE 581
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L F+ + + RV D +G+ FV F +E A AI ++ + + ++C+
Sbjct: 582 VLQKTFAPYGAIQEIRVFKD------KGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCS 635
Query: 208 WAAKGATSGD 217
W G SGD
Sbjct: 636 W---GKESGD 642
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAA 99
A RS+++G++ P + L VF TG K+I+ ++ Y GF+++ + +A
Sbjct: 76 AGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAE 135
Query: 100 LAIVTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-S 154
+ T NG + Q ++NWA A +R+ VFVGDL+P+VTD L F +
Sbjct: 136 RNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKA 195
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ +R +R AA
Sbjct: 196 VYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAA---- 251
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
+ K + + Q S E P N TT++VG + VT DL F
Sbjct: 252 --------NKKPLTMQPASYQNTQGNSGESDPTN----TTIFVGAVDQSVTEDDLKSVFG 299
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P+
Sbjct: 300 QF--GELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPS 352
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 43/218 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL P + + L F + + A+V+ +++ G S G+GF+ F N A+ +
Sbjct: 82 LWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTY 141
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + + R NWA GA G+ +Q+ + PE+
Sbjct: 142 NGAPMPSSEQAFRLNWAQLGA--GERRQA----------------------EGPEH---- 173
Query: 253 TTVYVGNLSSEVTSVDLHRHFHAL-----CVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
TV+VG+L+ +VT L F A+ + D R KG+GFVR++ E A+
Sbjct: 174 -TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAM 232
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH 345
N + +P++ T P + PL PA +
Sbjct: 233 TEMNGQYCSSRPMR-------TGPAANKKPLTMQPASY 263
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
T +++VG + VT L+ VF G L K+ + GFV Y +R A A+ L
Sbjct: 276 TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQALSVL 333
Query: 106 NGRHIFGQPIKVNWAYASSQRE 127
NG + GQ I+++W + S ++
Sbjct: 334 NGTQLGGQSIRLSWGRSPSNKQ 355
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 148/290 (51%), Gaps = 25/290 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F+STG L+ KLI+ ++ YGFV++ +A +
Sbjct: 87 VRTLWIGDLQYWMDETYIHGCFASTGELQSVKLIRDKQTGQLQGYGFVEFTSHAAAERVL 146
Query: 103 VTLNGRHIFGQPI--KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
NG + + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 147 QGYNGHAMPNVDLAYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSV 205
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA T+G ++
Sbjct: 206 KGAKVVTDKMTMRSKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAANRKTTGVQE 265
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ ++ T G +N+P TT++VG L VT L + F G
Sbjct: 266 RVPNTN-----TQGAQS----------DNDPNNTTIFVGGLDPNVTEDALKQVFAPY--G 308
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV++ P A A+QM + G+ ++ SWG P+
Sbjct: 309 EVIHVKIPVGKRCGFVQFVNRPSAEQALQMLQGTPIGGQNVRLSWGRSPS 358
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 27/204 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRS 97
D + +++VG++ VT+ +LQE F P ++G K++ + YGFV + D
Sbjct: 173 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPTE 232
Query: 98 AALAIVTLNGRHIFGQPIKV----------------NWAYASSQREDTSGHFNVFVGDLS 141
A A+ +NG +P+++ N +Q ++ + +FVG L
Sbjct: 233 QARAMTEMNGMPCSSRPMRIGPAANRKTTGVQERVPNTNTQGAQSDNDPNNTTIFVGGLD 292
Query: 142 PEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
P VT+ L F+ + ++ ++ G FV F N+ A+ A+ L G +G
Sbjct: 293 PNVTEDALKQVFAPYGEVIHVKIPVGKRCG------FVQFVNRPSAEQALQMLQGTPIGG 346
Query: 202 RQIRCNWAAKGATSGDEKQSSDSK 225
+ +R +W + + Q S+
Sbjct: 347 QNVRLSWGRSPSNKQAQPQQESSQ 370
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 144/290 (49%), Gaps = 27/290 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++H + L F+STG + K+I+ ++ YGFV+++ +A +
Sbjct: 97 KTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQ 156
Query: 104 TLNGRHIFG--QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + QP ++NWA S+ + D ++FVGDL+ +VTD+ L F SV+P+
Sbjct: 157 NYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPS 216
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + A+ +NG + +R +R A +SG +
Sbjct: 217 VKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQ 276
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ GQ + E + TT++VG L V+ DL + F
Sbjct: 277 Q----------------GGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQY-- 318
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV+++ A A+Q N + + ++ SWG P
Sbjct: 319 GEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNP 368
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST +++VG + P V++ L++ FS G + K+ GFV + +R +A A+
Sbjct: 292 STNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGC--GFVQFANRNNAEEALQK 349
Query: 105 LNGRHIFGQPIKVNWA 120
LNG I Q ++++W
Sbjct: 350 LNGTSIGKQTVRLSWG 365
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 149/295 (50%), Gaps = 27/295 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAA 99
A RS+++G++ P + L +FS TG K+I+ +S Y GF+++ + +A
Sbjct: 77 AGEIRSLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAE 136
Query: 100 LAIVTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-S 154
+ NG + Q ++NWA A +R+ VFVGDL+P+VTD L F +
Sbjct: 137 RILQAYNGTTMPSSDQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKA 196
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ +R +R AA
Sbjct: 197 VYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQYCSSRPMRTGPAA---- 252
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
++K + + + T G + E++P TT++VG L V DL F
Sbjct: 253 --NKKPLTMQPASYQNTQG----------NQGESDPTNTTIFVGALDQSVIEDDLKSVFG 300
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P+
Sbjct: 301 QF--GELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQSIRLSWGRSPS 353
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
++++GDL P + + L FS+ + A+V+ ++++G S G+GF+ F N A+ +
Sbjct: 82 SLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYSEGYGFIEFVNHATAERILQA 141
Query: 194 LNGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
NG + ++ R NWA GA G+ +Q+ + PE+
Sbjct: 142 YNGTTMPSSDQAFRLNWAQLGA--GERRQA----------------------EGPEH--- 174
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHAL-----CVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
TV+VG+L+ +VT L F A+ + D R KG+GFVR+ E A
Sbjct: 175 --TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRA 232
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH 345
+ N + +P++ T P + PL PA +
Sbjct: 233 MTEMNGQYCSSRPMR-------TGPAANKKPLTMQPASY 264
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
T +++VG + V L+ VF G L K+ + GFV Y +R A A+ L
Sbjct: 277 TNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQALSLL 334
Query: 106 NGRHIFGQPIKVNWAYASSQRE 127
NG + GQ I+++W + S ++
Sbjct: 335 NGTQLGGQSIRLSWGRSPSNKQ 356
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 146/295 (49%), Gaps = 27/295 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAA 99
A RS+++G++ P + L VF TG K+I+ ++ Y GF+++ + +A
Sbjct: 76 AGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAE 135
Query: 100 LAIVTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-S 154
+ T NG + Q ++NWA A +R+ VFVGDL+P+VTD L F +
Sbjct: 136 RNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKA 195
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ +R +R AA
Sbjct: 196 VYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAA---- 251
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
+ K + + Q S E P N TT++VG + VT DL F
Sbjct: 252 --------NKKPLTMQPASYQNTQGNSGESDPTN----TTIFVGAVDQSVTEDDLKSVFG 299
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P+
Sbjct: 300 QF--GELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPS 352
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 95/218 (43%), Gaps = 43/218 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL P + + L F + + A+V+ +++ G S G+GF+ F N A+ +
Sbjct: 82 LWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTY 141
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + + R NWA GA G+ +Q+ + PE+
Sbjct: 142 NGAPMPSSEQAFRLNWAQLGA--GERRQA----------------------EGPEH---- 173
Query: 253 TTVYVGNLSSEVTSVDLHRHFHAL-----CVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
TV+VG+L+ +VT L F A+ + D R KG+GFVR++ E A+
Sbjct: 174 -TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAM 232
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPH 345
N + +P++ T P + PL PA +
Sbjct: 233 TEMNGQYCSSRPMR-------TGPAANKKPLTMQPASY 263
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
T +++VG + VT L+ VF G L K+ + GFV Y +R A A+ L
Sbjct: 276 TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRC--GFVQYANRACAEQALSVL 333
Query: 106 NGRHIFGQPIKVNWAYASSQRE 127
NG + GQ I+++W + S ++
Sbjct: 334 NGTQLGGQSIRLSWGRSPSNKQ 355
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 147/293 (50%), Gaps = 28/293 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLE--GCKLIKKDKSS----YGFVDYFDRRSAALA 101
++++VG++H + A L F+S E K+I+ + YGFV++ A
Sbjct: 101 KTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKV 160
Query: 102 IVTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFS-V 155
+ NG + QP ++NWA S+ + E+ ++FVGDLSP+V+D L FS
Sbjct: 161 LREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEK 220
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG +R +R A T+
Sbjct: 221 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 280
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
G ++Q + NG PE + TT++VG L S VT DL + F+
Sbjct: 281 GYQQQGG------YMPNGTL--------TRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNE 326
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV++ P A A++ N ++ + ++ SWG P
Sbjct: 327 F--GEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNP 377
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 28/188 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
S++VG++ P V++ LL E FS P ++ K++ + YGFV + D A+
Sbjct: 198 SIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMT 257
Query: 104 TLNGRHIFGQPIKVNWAYAS-----------------SQREDTSGHFNVFVGDLSPEVTD 146
+NG + +++ A ++ E + +FVG L VTD
Sbjct: 258 EMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTD 317
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L F+ F ++ +G GFV F N+ +A+ A+ LNG +G + +R
Sbjct: 318 EDLKQPFNEFGEIVSVKIP------VGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRL 371
Query: 207 NWAAKGAT 214
+W A
Sbjct: 372 SWGRNPAN 379
>gi|119620231|gb|EAW99825.1| TIA1 cytotoxic granule-associated RNA binding protein, isoform
CRA_c [Homo sapiens]
Length = 144
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 97/155 (62%), Gaps = 13/155 (8%)
Query: 105 LNGRHIFGQPIKVNWAYA-SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T + A F+ F SDAR
Sbjct: 1 MNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDAR 60
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + + S+
Sbjct: 61 VVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESN 120
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVG 258
+K Q +E +++P TVY G
Sbjct: 121 TK------------QLSYDEVVNQSSPSNCTVYCG 143
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+LS E+T+ D+ F G I D RV +D KG+GFV + +A AIQ
Sbjct: 32 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQ 89
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSST 336
+ L G+ I+ +W ++ PP ST
Sbjct: 90 QMGGQWLGGRQIRTNWATR-KPPAPKST 116
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSA 98
D S V+VG++ P++T ++ F+ G + +++K YGFV +F++ A
Sbjct: 25 DTSNHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDA 84
Query: 99 ALAIVTLNGRHIFGQPIKVNWA 120
AI + G+ + G+ I+ NWA
Sbjct: 85 ENAIQQMGGQWLGGRQIRTNWA 106
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 149/292 (51%), Gaps = 25/292 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
+S+++G++ + L +FS+TG + K+I+ ++ Y GF+++ R +A +
Sbjct: 68 IKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFIEFVSRAAAERIL 127
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
T NG + Q ++NWA A +R+D F VFVGDL+ +V D L F +V+P
Sbjct: 128 QTYNGTPMPNSEQAFRLNWATLGAGERRQDDGPDFTVFVGDLAADVNDYLLQETFRNVYP 187
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D+ TGRS+G+GF+ F ++ + + A+ ++NG++ R +R AA
Sbjct: 188 SVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPMRIGPAATKKPLTQ 247
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q K+ + G + EN+P TT++VG L VT L F
Sbjct: 248 QYQ----KATYQNPQG----------NQGENDPNNTTIFVGALDPSVTDDTLRAVFSKY- 292
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+ M N + G+ I+ SWG P+
Sbjct: 293 -GELVHVKIPAGKRCGFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPS 343
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT+ L+ VFS G L K+ + GFV + +R SA A+ LNG
Sbjct: 270 TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC--GFVQFANRTSAEQALSMLNGT 327
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ I+++W + S ++
Sbjct: 328 QIAGQNIRLSWGRSPSNKQ 346
>gi|194220644|ref|XP_001917255.1| PREDICTED: nucleolysin TIA-1 isoform p40-like [Equus caballus]
Length = 300
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 30/200 (15%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAA 99
+ T +++YVGN+ VT AL+ ++FS GP + CK+I + Y FV++++ R AA
Sbjct: 1 MEDETPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFYEHRHAA 60
Query: 100 LAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSG-----------HFNVFVGDLSPEVTDA 147
A+ +NGR I G+ +KVNWA SSQ++DTS HF+VFVGDLSPE+T
Sbjct: 61 AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE 120
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ----------------EDAQSAI 191
+ A F+ F SDARV+ D TG+S+G+GFVSF N+ E A AI
Sbjct: 121 DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGYSFVRFNSHESAAHAI 180
Query: 192 NDLNGKWLGNRQIRCNWAAK 211
+NG + ++C W +
Sbjct: 181 VSVNGTTIEGHVVKCYWGKE 200
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 45/215 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +
Sbjct: 9 LYVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFYEHRHAAAALAAM 66
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG+ + ++++ NWA T +K+ + S +VV + + + +
Sbjct: 67 NGRKIMGKEVKVNWAT---TPSSQKKDTSSSTVV----------------STQRSQDHFH 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----------------------KGF 292
V+VG+LS E+T+ D+ F G I D RV +D KG+
Sbjct: 108 VFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFVSFFNKWIFPDKGY 165
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
FVR+++H AA AI N + G +KC WG +
Sbjct: 166 SFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKE 200
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG----FGFVRYSTHPEAALAIQM 309
T+YVGNLS +VT + + F +G ++ ++ D + FV + H AA A+
Sbjct: 8 TLYVGNLSRDVTEALILQLFSQ--IGPCKNCKMIMDTAGNDPYCFVEFYEHRHAAAALAA 65
Query: 310 GNARILCGKPIKCSWGSKPT 329
N R + GK +K +W + P+
Sbjct: 66 MNGRKIMGKEVKVNWATTPS 85
>gi|358254799|dbj|GAA56358.1| nucleolysin TIA-1 isoform p40 [Clonorchis sinensis]
Length = 508
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 117/208 (56%), Gaps = 17/208 (8%)
Query: 122 ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+++Q F++FVGDL+P++ L A F+ F ++ +++ D T + +G+GFV++
Sbjct: 25 SANQELSNDDSFHIFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAY 84
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
+++E+A+ AI +NG+ LG+R IR NWA + D+ + + VE+ N S
Sbjct: 85 KSREEAERAIQVMNGQILGSRAIRTNWAVR-RDPADQAKDHRPLNYVEVFNASSASN--- 140
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHP 301
TT+YVG ++S +T + L F G I+++R+ ++KGF F+R+ +H
Sbjct: 141 -----------TTIYVGGITSGLTELLLQNAFQEF--GEIKEIRIFKEKGFSFIRFDSHA 187
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPT 329
A AI + R++ + KCSWG +PT
Sbjct: 188 AATRAIVTMHGRLVGDQSCKCSWGKEPT 215
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTL 105
++VG++ P + +L F++ G + CK+IK + YGFV Y R A AI +
Sbjct: 38 IFVGDLAPDIEGDVLLAAFNTFGNVTECKIIKDMHTQKPKGYGFVAYKSREEAERAIQVM 97
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGH--------FN--------VFVGDLSPEVTDATL 149
NG+ + + I+ NWA + H FN ++VG ++ +T+ L
Sbjct: 98 NGQILGSRAIRTNWAVRRDPADQAKDHRPLNYVEVFNASSASNTTIYVGGITSGLTELLL 157
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F F + R+ + +GF F+ F + A AI ++G+ +G++ +C+W
Sbjct: 158 QNAFQEFGEIKEIRIF------KEKGFSFIRFDSHAAATRAIVTMHGRLVGDQSCKCSWG 211
Query: 210 AK 211
+
Sbjct: 212 KE 213
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 42 FDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAA 99
F+AS+ ++YVG I +T LLQ F G ++ ++ K + + F+ + +A
Sbjct: 133 FNASSASNTTIYVGGITSGLTELLLQNAFQEFGEIKEIRIFK--EKGFSFIRFDSHAAAT 190
Query: 100 LAIVTLNGRHIFGQPIKVNW 119
AIVT++GR + Q K +W
Sbjct: 191 RAIVTMHGRLVGDQSCKCSW 210
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 157/299 (52%), Gaps = 21/299 (7%)
Query: 40 PRFDAST--CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYF 93
PR ST +++++G++ P + L F+ TG + K+I ++ YGFV++F
Sbjct: 90 PRRQGSTDEVKTLWIGDLQPWMDETYLNNCFAHTGEVSSVKVICNKQTGQSEGYGFVEFF 149
Query: 94 DRRSAALAIVTLNGRHIFGQ--PIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATL 149
+A + NG + P ++NWA A+ +R DT ++FVGDL+ +VTDA L
Sbjct: 150 SHTTAEKVLQNYNGTIMPNTELPFRLNWATFSANDRRPDTGSDLSIFVGDLAADVTDAIL 209
Query: 150 FACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
FS + + A+V+ D +G S+G+GF F ++ + A+ ++NG + +R +R
Sbjct: 210 QETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDENERTRAMTEMNGIYCSSRPMRIGV 268
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQ--EKSNEDAPENNPQYTTVYVGNLSSEVTS 266
A SG +Q S+++V L G +G + S D+ NN TT++VG L S+V+
Sbjct: 269 ATPKKASG-YQQGYASQALV-LAGGHPNGMAVQGSQSDSESNN---TTIFVGGLDSDVSD 323
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
DL + F G + V++ KG GFV+++ A AIQ N ++ + ++ SWG
Sbjct: 324 EDLKQAFSKF--GDVVSVKIPIGKGCGFVQFANRKNAEDAIQGLNGTVIGKQTVRLSWG 380
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 102/219 (46%), Gaps = 43/219 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D + S++VG++ VT+A+LQE FSS ++G K++ S YGF + D
Sbjct: 186 RPDTGSDLSIFVGDLAADVTDAILQETFSSRYTSVKGAKVVIDSNSGPSKGYGF-RFGDE 244
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YAS-----------------SQRE 127
A+ +NG + +P+++ A YAS SQ +
Sbjct: 245 NERTRAMTEMNGIYCSSRPMRIGVATPKKASGYQQGYASQALVLAGGHPNGMAVQGSQSD 304
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
S + +FVG L +V+D L FS F ++ +G GFV F N+++A
Sbjct: 305 SESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPI------GKGCGFVQFANRKNA 358
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
+ AI LNG +G + +R +W G ++G+++ DS +
Sbjct: 359 EDAIQGLNGTVIGKQTVRLSW---GRSTGNKQWRGDSNN 394
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/345 (30%), Positives = 167/345 (48%), Gaps = 37/345 (10%)
Query: 14 QQSLYQYH------PSLLAAPQIEPILSGN--LPPRFDAST--CRSVYVGNIHPQVTNAL 63
QQ QYH P ++ PQ L PP+ AS R++++G++ +
Sbjct: 13 QQPPQQYHQAPPQQPYVMMPPQAPQALWAQSAQPPQQPASADEVRTLWIGDLQYWMDENY 72
Query: 64 LQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKV 117
L F +TG + K+I+ ++S YGF+++ R SA + T G + GQ ++
Sbjct: 73 LYTCFGNTGEVTSVKVIRNKQTSQSEGYGFIEFNTRASAERVLQTYQGAIMPNGGQSYRL 132
Query: 118 NWAYAS----SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGR 172
NWA S S R+D +FVGDL+ +VTD L F + + A+V+ D+ TGR
Sbjct: 133 NWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGR 192
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
S+G+GFV F ++ + A+ ++ G R +R AT+ + ++ +K+ T
Sbjct: 193 SKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIG----PATNKNPAATTQAKASYSNTP 248
Query: 233 GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGF 292
G GQ EN+P TT++VGNL VT L + F G + V++ K
Sbjct: 249 G---GQS-------ENDPNNTTIFVGNLDPNVTDDHLRQVFSQY--GELVHVKIPSGKRC 296
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
GFV++S A AI++ N +L G+ ++ SWG P+ T P
Sbjct: 297 GFVQFSDRSSAEEAIRVLNGTLLGGQNVRLSWGRTPSNKQTQQDP 341
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 27/296 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD----KSSYGFVDYFDRRSAA 99
AS +S+++G++ + + VF+ +G K+I+ YGF+++ A
Sbjct: 56 ASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAE 115
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFACF- 153
+ T NG + Q ++NWA A + +R T G +FVGDL+PEVTD L F
Sbjct: 116 RVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFK 175
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ R +R AA
Sbjct: 176 NVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA--- 232
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+K+ + + + + +N A +N+P TT++VG L + VT +L F
Sbjct: 233 ----------NKNALPMQPAMYQNTQGAN--AGDNDPNNTTIFVGGLDANVTDDELKSIF 280
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P
Sbjct: 281 GQF--GELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPN 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++VG++ P+VT+ +L + F + G ++G K++ + YGFV + D A+
Sbjct: 155 TIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMT 214
Query: 104 TLNGRHIFGQPIKVNWA------------YASSQR----EDTSGHFNVFVGDLSPEVTDA 147
+NG++ +P+++ A Y ++Q ++ + +FVG L VTD
Sbjct: 215 EMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDD 274
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L + F F ++ ++ G FV + N+ A+ A++ LNG LG + IR +
Sbjct: 275 ELKSIFGQFGELLHVKIPPGKRCG------FVQYANKASAEHALSVLNGTQLGGQSIRLS 328
Query: 208 WAAKGATSGDEKQ 220
W D+ Q
Sbjct: 329 WGRSPNKQSDQAQ 341
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 149/296 (50%), Gaps = 27/296 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAA 99
AS +S+++G++ + + VF+ +G K+I+ YGF+++ A
Sbjct: 56 ASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAE 115
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFACF- 153
+ T NG + Q ++NWA A + +R T G +FVGDL+PEVTD L F
Sbjct: 116 RVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFK 175
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ R +R AA
Sbjct: 176 NVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA--- 232
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+K+ + + + + +N A +N+P TT++VG L + VT +L F
Sbjct: 233 ----------NKNALPMQPAMYQNTQGAN--AGDNDPNNTTIFVGGLDANVTDDELKSIF 280
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P
Sbjct: 281 GQF--GELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPN 334
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 27/193 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++VG++ P+VT+ +L + F + G ++G K++ + YGFV + D A+
Sbjct: 155 TIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMT 214
Query: 104 TLNGRHIFGQPIKVNWA------------YASSQR----EDTSGHFNVFVGDLSPEVTDA 147
+NG++ +P+++ A Y ++Q ++ + +FVG L VTD
Sbjct: 215 EMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDD 274
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
L + F F ++ ++ G FV + N+ A+ A++ LNG LG + IR +
Sbjct: 275 ELKSIFGQFGELLHVKIPPGKRCG------FVQYANKASAEHALSVLNGTQLGGQSIRLS 328
Query: 208 WAAKGATSGDEKQ 220
W D+ Q
Sbjct: 329 WGRSPNKQSDQAQ 341
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 27/296 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAA 99
S +S+++G++ + + VF+ +G + K+I+ YGF+++ + A
Sbjct: 60 GSEVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHSVAE 119
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYASS--QREDTSG-HFNVFVGDLSPEVTDATLFACF- 153
+ T NG + Q ++NWA A + +R T G +FVGDL+PEVTD L F
Sbjct: 120 RVLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSDTFK 179
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+V+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ R +R AA
Sbjct: 180 NVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA--- 236
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+K+ + + + + N A +++P TT++VG L + VT +L F
Sbjct: 237 ----------NKNALPMQPAMYQNTQGGN--AGDSDPNNTTIFVGGLDANVTDDELKSIF 284
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + N L G+ I+ SWG P
Sbjct: 285 GQF--GELLHVKIPPGKRCGFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSPN 338
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 147/294 (50%), Gaps = 31/294 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++V+VG++H + L F+S G + K+I+ ++ YGFV+++ +A +
Sbjct: 78 KTVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQ 137
Query: 104 TLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPT 158
G + QP ++NWA +R D ++FVGDL+ +VTD+ L FS +P+
Sbjct: 138 NYAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPS 197
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + ++ A+ ++NG + +R +R A TSG +
Sbjct: 198 VKAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQ 257
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ S +NGIS E + + TT++VG L S VT+ DL + F
Sbjct: 258 QGSQ--------SNGISSQSEADSTN--------TTIFVGGLDSNVTAEDLKQPFSQY-- 299
Query: 279 GTIEDVRVQRDKGFGFV----RYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GF R A A+Q N + + ++ SWG P
Sbjct: 300 GEIVSVKIPVGKGCGFTICNSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNP 353
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 26/191 (13%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ VT+++L E FS+ P ++ K++ + YGFV + D
Sbjct: 164 RSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDD 223
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY---------------ASSQREDTSGHFNVFVGDL 140
+ A+ +NG + +P+++ A SSQ E S + +FVG L
Sbjct: 224 DERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGISSQSEADSTNTTIFVGGL 283
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ--EDAQSAINDLNGKW 198
VT L FS + ++ G+ GF + R+ ++A+ A+ LNG
Sbjct: 284 DSNVTAEDLKQPFSQYGEIVSVKI----PVGKGCGFTICNSRSPGPKNAEEALQKLNGTT 339
Query: 199 LGNRQIRCNWA 209
+G + +R +W
Sbjct: 340 IGKQMVRLSWG 350
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 17/334 (5%)
Query: 6 LKQQTMMQQQSLYQYHPSLLAAPQIEPILSGN-LPPRFDASTCRSVYVGNIHPQVTNALL 64
++ Q QQQ + HPS +A + + S R++++G++ V L
Sbjct: 1 MEAQAHQQQQWM---HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYL 57
Query: 65 QEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFG--QPIKVN 118
F+ TG + K+I+ + YGFV++ +A + NG + G Q ++N
Sbjct: 58 HSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLN 117
Query: 119 WAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRG 175
WA +R D ++FVGDL+P+VTD L F +P+ A+V+ D TGR++G
Sbjct: 118 WASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKG 177
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV F ++ + A+ ++NG + R +R + A T+G ++Q + + + +
Sbjct: 178 YGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYT 237
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
++ +N+ TT++VGNL VT +L + F G + V++ +G GFV
Sbjct: 238 TPPLQAL--PADNDINNTTIFVGNLDPNVTEEELKQIFSQF--GELVYVKIPAGRGCGFV 293
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
++ T A AIQ ++ ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPT 327
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 115/292 (39%), Gaps = 56/292 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P + G K++ + YGFV + D
Sbjct: 127 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS------------------------- 130
A+ +NG + +P++++ A++ ++ T
Sbjct: 187 MERNRAMTEMNGVYCSTRPMRIS---AATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQA 243
Query: 131 -------GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
+ +FVG+L P VT+ L FS F ++ RG GFV F
Sbjct: 244 LPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKI------PAGRGCGFVQFGT 297
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWA----AKGATSGDEKQSSDSKSVVELTNGISDGQE 239
+ A+ AI + G +G +R +W AK G Q +D G G +
Sbjct: 298 RTSAEEAIQRMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYD 357
Query: 240 KSNEDAPENNPQYTT-VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK 290
A ++ Y Y G L + R++ A G + V QRD+
Sbjct: 358 AYPYGATQDPSLYAYGAYAGYLQYPQQA----RYYLAAMAGAVPAVE-QRDE 404
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 133/273 (48%), Gaps = 41/273 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P V+ ALL ++FS G + ++ I K Y +V++ D + AI
Sbjct: 44 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIEK 103
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN I G+P ++ W+ S R+ SG N+F+ +L P++ + TL+ FSVF +
Sbjct: 104 LNYTAIKGRPCRIMWSQRDPSMRKKGSG--NIFIKNLHPDIDNKTLYETFSVFGNILSCK 161
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
+ D+ TG+S+GFGFV F N+E A+ AI+ +NG L +++ + A + D + D
Sbjct: 162 IANDE-TGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEV---YVAPHVSKKDRQSKLD 217
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
E +T VYV NL E T D F GTI
Sbjct: 218 -----------------------EARANFTNVYVKNLDLEATEEDFENLFKPY--GTITS 252
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAIQMGN 311
V +++D +GFGFV + H +A A++ N
Sbjct: 253 VALEKDAEGKSRGFGFVDFENHEDAVKAVEALN 285
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 123/292 (42%), Gaps = 32/292 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N+HP + N L E FS G + CK+ + +GFV + + +A AI +
Sbjct: 132 NIFIKNLHPDIDNKTLYETFSVFGNILSCKIANDETGKSKGFGFVHFENEEAAREAIDAI 191
Query: 106 NGRHIFGQPIKVNWAYASSQR-----EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + GQ + V + R E + NV+V +L E T+ F + T +
Sbjct: 192 NGMLLNGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKPYGTIT 251
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ D + G+SRGFGFV F N EDA A+ LN + + A K E +
Sbjct: 252 SVALEKDAE-GKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERLQELK 310
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S +E Q +++ NL + L F GT
Sbjct: 311 KQYQASKLEKLAKY----------------QGINLFIKNLDDSIDDEKLKEEFAPF--GT 352
Query: 281 IEDVRVQR-----DKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I RV R KGFGFV +ST EA AI N +I+ GKP+ + +
Sbjct: 353 ITSARVMRTENGKSKGFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIAQR 404
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 8/80 (10%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALAI 307
++YVG L V+ L+ F +G++ +RV RD G+ +V ++ H AI
Sbjct: 44 SLYVGELDPSVSEALLYDIFSP--IGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAI 101
Query: 308 QMGNARILCGKPIKCSWGSK 327
+ N + G+P + W +
Sbjct: 102 EKLNYTAIKGRPCRIMWSQR 121
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G L K+I+ ++ YGF+++ A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
NG+ + Q K+NWA A +R D + +FVGDL+ +VTD L F +
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ G
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q S + + T+ SD P TTV+VG L VT L + F
Sbjct: 246 QQQPSATYQNTQGTDSDSD-------------PNNTTVFVGGLDPSVTDEVLKQAFSPY- 291
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI+M N L G+ I+ SWG P
Sbjct: 292 -GELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSP 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS-----YG 88
SG R D + +++VG++ VT+ +LQ+ F + ++G K++ D+S+ YG
Sbjct: 147 SGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVV-FDRSTGRSKGYG 205
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA---------------YASSQREDTSGHF 133
FV + D A+ +NG++ +P+++ A Y ++Q D+
Sbjct: 206 FVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDP 265
Query: 134 N---VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
N VFVG L P VTD L FS + ++ ++ GFV + N+ A+ A
Sbjct: 266 NNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEA 319
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
I LNG LG + IR +W G + G+++ D
Sbjct: 320 IRMLNGSQLGGQSIRLSW---GRSPGNKQPQQD 349
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 144/297 (48%), Gaps = 16/297 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L FS TG + K+I+ + YGF+++ +A +
Sbjct: 14 VRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVL 73
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G Q ++NWA +R D ++FVGDL+P+VTD L F +
Sbjct: 74 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYG 133
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + R +R + A T+G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGY 193
Query: 218 EKQSSDSKSVVELTNGI-----SDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
++ + + N PE + TT+YVGNL V+ +L ++
Sbjct: 194 QQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQN 253
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F L G I V+V K GFV++ A AIQ +IL + I+ SWG T
Sbjct: 254 F--LQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQT 308
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 47/210 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + G + G K++ + YGFV + D
Sbjct: 101 RPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDE 160
Query: 96 RSAALAIVTLNGRHIFGQPIKVNW-------------------------------AYASS 124
A+ +NG + +P++++ AY ++
Sbjct: 161 SERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTA 220
Query: 125 QREDTSGHFNV-----FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
++V +VG+L V++ L F F +V + GFV
Sbjct: 221 PVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVH------PGKACGFV 274
Query: 180 SFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F + A+ AI + GK LG + IR +W
Sbjct: 275 QFGARASAEEAIQKMQGKILGQQVIRVSWG 304
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 38 LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRS 97
+PP +D + ++YVGN+ V+ L++ F G + K+ + GFV + R S
Sbjct: 225 VPPEYDVNNT-TIYVGNLDLNVSEEELKQNFLQFGEIVSVKV--HPGKACGFVQFGARAS 281
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
A AI + G+ + Q I+V+W + R+D G
Sbjct: 282 AEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPG 315
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G L K+I+ ++ YGF+++ A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
NG+ + Q K+NWA A +R D + +FVGDL+ +VTD L F +
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ G
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q S + + T+ SD P TTV+VG L VT L + F
Sbjct: 246 QQQPSATYQNTQGTDSDSD-------------PNNTTVFVGGLDPSVTDEVLKQAFSPY- 291
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI+M N L G+ I+ SWG P
Sbjct: 292 -GELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSP 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS-----YG 88
SG R D + +++VG++ VT+ +LQ+ F + ++G K++ D+S+ YG
Sbjct: 147 SGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVV-FDRSTGRSKGYG 205
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA---------------YASSQREDTSGHF 133
FV + D A+ +NG++ +P+++ A Y ++Q D+
Sbjct: 206 FVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDP 265
Query: 134 N---VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
N VFVG L P VTD L FS + ++ ++ GFV + N+ A+ A
Sbjct: 266 NNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEA 319
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
I LNG LG + IR +W G + G+++ D
Sbjct: 320 IRMLNGSQLGGQSIRLSW---GRSPGNKQPQQD 349
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 148/293 (50%), Gaps = 29/293 (9%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
S R++++G++ + + + F+STG ++ KLI+ + YGF+++ R +A
Sbjct: 118 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 177
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ T NG + P ++NWA A +R+DT + +FVGDL+ +VTD L F +P
Sbjct: 178 VLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+ A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA K AT
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
EK V G+ +N+P TT++VG L VT L + F
Sbjct: 297 QEK--------VPSAQGVQS----------DNDPNNTTIFVGGLDPNVTEDMLKQVFTPY 338
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + ++ G+ ++ SWG P+
Sbjct: 339 --GDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPS 389
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 85/187 (45%), Gaps = 27/187 (14%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDK-----SSYGFVDYFDRR 96
D + +++VG++ VT+ +LQE F + P ++G K++ DK YGFV + D
Sbjct: 206 DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVT-DKLTMRTKGYGFVKFGDPN 264
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASS--------------QREDTSGHFNVFVGDLSP 142
A A+ +NG +P+++ A Q ++ + +FVG L P
Sbjct: 265 EQARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNTTIFVGGLDP 324
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
VT+ L F+ + ++ ++ G FV + N+ A+ A+ L G +G +
Sbjct: 325 NVTEDMLKQVFTPYGDVVHVKIPVGKRCG------FVQYANRSSAEEALVILQGTLVGGQ 378
Query: 203 QIRCNWA 209
+R +W
Sbjct: 379 NVRLSWG 385
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+V L G
Sbjct: 316 TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEALVILQGT 373
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 374 LVGGQNVRLSWGRSPSNKQ 392
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 17/334 (5%)
Query: 6 LKQQTMMQQQSLYQYHPSLLAAPQIEPILSGN-LPPRFDASTCRSVYVGNIHPQVTNALL 64
++ Q QQQ + HPS +A + + S R++++G++ V L
Sbjct: 1 MEAQAHQQQQWM---HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYL 57
Query: 65 QEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFG--QPIKVN 118
F+ TG + K+I+ + YGFV++ +A + NG + G Q ++N
Sbjct: 58 HSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLN 117
Query: 119 WAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRG 175
WA +R D ++FVGDL+P+VTD L F +P+ A+V+ D TGR++G
Sbjct: 118 WASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKG 177
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV F ++ + A+ ++NG + R +R + A T+G ++Q + + + +
Sbjct: 178 YGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYT 237
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
++ +N+ TT++VGNL VT +L + F G + V++ +G GFV
Sbjct: 238 TPPLQAL--PADNDINNTTIFVGNLDPNVTEEELKQIFSQF--GELVYVKIPAGRGCGFV 293
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
++ T A AIQ ++ ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPT 327
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 22/297 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L F TG + K+I+ + YGFV++ +A +
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + Q ++NWA +R D + ++FVGDL+P+VTD L F +P
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG- 216
+ A+V+ D T RS+G+GFV F ++ + A+ ++NG + R +R + A T+G
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGA 192
Query: 217 ----DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
V T+ + Q P+ + TT++VGNL V+ +L +
Sbjct: 193 YAAPAAPVPKPVYPVPAYTSPVVQVQ------PPDYDVNNTTIFVGNLDLNVSEEELKQ- 245
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
++L G I V++Q KGFGFV++ T A AIQ +++ + ++ SWG T
Sbjct: 246 -NSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLT 301
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 47/207 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R DA+ S++VG++ P VT+ LLQE F + P + G K++ ++ YGFV + D
Sbjct: 100 RPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDE 159
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---------------------- 133
A+ +NG + +P++++ A++ ++ T +
Sbjct: 160 NERNRAMTEMNGVYCSTRPMRIS---AATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQ 216
Query: 134 -----------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+FVG+L V++ L F ++ +GFGFV F
Sbjct: 217 VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQ------PGKGFGFVQFG 270
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ A+ AI + GK +G + +R +W
Sbjct: 271 TRASAEEAIQKMQGKMIGQQVVRISWG 297
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 39 PPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSA 98
PP +D + +++VGN+ V+ L++ G + K+ + +GFV + R SA
Sbjct: 219 PPDYDVNNT-TIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKGFGFVQFGTRASA 275
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVG 138
AI + G+ I Q ++++W + R+ ++ + G
Sbjct: 276 EEAIQKMQGKMIGQQVVRISWGRTLTARQMDPNQWSAYYG 315
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 146/297 (49%), Gaps = 22/297 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V L F TG + K+I+ + YGFV++ +A +
Sbjct: 13 VRTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYGFVEFVSHAAAERVL 72
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + Q ++NWA +R D + ++FVGDL+P+VTD L F +P
Sbjct: 73 QTYNGTQMPATDQTFRLNWASFGIGERRPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYP 132
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG- 216
+ A+V+ D T RS+G+GFV F ++ + A+ ++NG + R +R + A T+G
Sbjct: 133 SVRGAKVVTDPNTARSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTGA 192
Query: 217 ----DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
V T+ + Q P+ + TT++VGNL V+ +L +
Sbjct: 193 YAAPAAPVPKPVYPVPAYTSPVVQVQ------PPDYDVNNTTIFVGNLDLNVSEEELKQ- 245
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
++L G I V++Q KGFGFV++ T A AIQ +++ + ++ SWG T
Sbjct: 246 -NSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIGQQVVRISWGRTLT 301
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 47/207 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R DA+ S++VG++ P VT+ LLQE F + P + G K++ ++ YGFV + D
Sbjct: 100 RPDAAPEHSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTARSKGYGFVKFSDE 159
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---------------------- 133
A+ +NG + +P++++ A++ ++ T +
Sbjct: 160 NERNRAMTEMNGVYCSTRPMRIS---AATPKKTTGAYAAPAAPVPKPVYPVPAYTSPVVQ 216
Query: 134 -----------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+FVG+L V++ L F ++ +GFGFV F
Sbjct: 217 VQPPDYDVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQ------PGKGFGFVQFG 270
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ A+ AI + GK +G + +R +W
Sbjct: 271 TRASAEEAIQKMQGKMIGQQVVRISWG 297
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 39 PPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSA 98
PP +D + +++VGN+ V+ L++ G + K+ + +GFV + R SA
Sbjct: 219 PPDYDVNNT-TIFVGNLDLNVSEEELKQNSLQFGEIVSVKI--QPGKGFGFVQFGTRASA 275
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
AI + G+ I Q ++++W + R+D G
Sbjct: 276 EEAIQKMQGKMIGQQVVRISWGRTLTARQDLPG 308
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 17/334 (5%)
Query: 6 LKQQTMMQQQSLYQYHPSLLAAPQIEPILSGN-LPPRFDASTCRSVYVGNIHPQVTNALL 64
++ Q QQQ + HPS +A + + S R++++G++ V L
Sbjct: 1 MEAQAHQQQQWM---HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYL 57
Query: 65 QEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFG--QPIKVN 118
F+ TG + K+I+ + YGFV++ +A + NG + G Q ++N
Sbjct: 58 HSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLN 117
Query: 119 WAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRG 175
WA +R D ++FVGDL+P+VTD L F +P+ A+V+ D TGR++G
Sbjct: 118 WASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKG 177
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV F ++ + A+ ++NG + R +R + A T+G ++Q + + + +
Sbjct: 178 YGFVKFSDEMERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYT 237
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV 295
++ +N+ TT++VGNL VT +L + F G + V++ +G GFV
Sbjct: 238 TPPLQAL--PADNDINNTTIFVGNLDPNVTEEELKQIFSQF--GELVYVKIPAGRGCGFV 293
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
++ T A AIQ ++ ++ SWG PT
Sbjct: 294 QFGTRTSAEEAIQRMQGTVIGQLVVRISWGRSPT 327
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G L K+I+ ++ YGF+++ A +
Sbjct: 66 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 125
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
NG+ + Q K+NWA A +R D + +FVGDL+ +VTD L F +
Sbjct: 126 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ G
Sbjct: 186 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 245
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q S + + T+ SD P TTV+VG L VT L + F
Sbjct: 246 QQQPSATYQNTQGTDSDSD-------------PNNTTVFVGGLDPSVTDEVLKQAFSPY- 291
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI+M N L G+ I+ SWG P
Sbjct: 292 -GELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSP 341
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 34/213 (15%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS-----YG 88
SG R D + +++VG++ VT+ +LQ+ F + ++G K++ D+S+ YG
Sbjct: 147 SGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVV-FDRSTGRSKGYG 205
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA---------------YASSQREDTSGHF 133
FV + D A+ +NG++ +P+++ A Y ++Q D+
Sbjct: 206 FVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDP 265
Query: 134 N---VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
N VFVG L P VTD L FS + ++ ++ GFV + N+ A+ A
Sbjct: 266 NNTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEA 319
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
I LNG LG + IR +W G + G+++ D
Sbjct: 320 IRMLNGSQLGGQSIRLSW---GRSPGNKQPQQD 349
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 148/293 (50%), Gaps = 29/293 (9%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
S R++++G++ + + + F+STG ++ KLI+ + YGF+++ R +A
Sbjct: 118 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 177
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ T NG + P ++NWA A +R+DT + +FVGDL+ +VTD L F +P
Sbjct: 178 VLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHYP 236
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+ A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA K AT
Sbjct: 237 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 296
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
EK V G+ +N+P TT++VG L VT L + F
Sbjct: 297 QEK--------VPSAQGVQS----------DNDPNNTTIFVGGLDPNVTEDMLKQVFTPY 338
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + ++ G+ ++ SWG P+
Sbjct: 339 --GDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPS 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+V L G
Sbjct: 316 TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEALVILQGT 373
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 374 LVGGQNVRLSWGRSPSNKQ 392
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 148/293 (50%), Gaps = 29/293 (9%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
S R++++G++ + + + F+STG ++ KLI+ + YGF+++ R +A
Sbjct: 108 SEVRTLWIGDLQYWMDDNYIYGCFASTGEVQNVKLIRDKHTGQLQGYGFIEFISRAAAER 167
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ T NG + P ++NWA A +R+DT + +FVGDL+ +VTD L F +P
Sbjct: 168 VLQTYNGTMMPNVELPFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYVLQETFRAHYP 226
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+ A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA K AT
Sbjct: 227 SVKGAKVVTDKLTMRTKGYGFVKFGDPNEQARAMTEMNGMLCSSRPMRIGPAANKKATVV 286
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
EK V G+ +N+P TT++VG L VT L + F
Sbjct: 287 QEK--------VPSAQGVQS----------DNDPNNTTIFVGGLDPNVTEDMLKQVFTPY 328
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+Y+ A A+ + ++ G+ ++ SWG P+
Sbjct: 329 --GDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGTLVGGQNVRLSWGRSPS 379
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 25/186 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKD----KSSYGFVDYFDRRS 97
D + +++VG++ VT+ +LQE F + P ++G K++ YGFV + D
Sbjct: 196 DDTPDYTIFVGDLAADVTDYVLQETFRAHYPSVKGAKVVTDKLTMRTKGYGFVKFGDPNE 255
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASS--------------QREDTSGHFNVFVGDLSPE 143
A A+ +NG +P+++ A Q ++ + +FVG L P
Sbjct: 256 QARAMTEMNGMLCSSRPMRIGPAANKKATVVQEKVPSAQGVQSDNDPNNTTIFVGGLDPN 315
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
VT+ L F+ + ++ ++ G FV + N+ A+ A+ L G +G +
Sbjct: 316 VTEDMLKQVFTPYGDVVHVKIPVGKRCG------FVQYANRSSAEEALVILQGTLVGGQN 369
Query: 204 IRCNWA 209
+R +W
Sbjct: 370 VRLSWG 375
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y +R SA A+V L G
Sbjct: 306 TIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRC--GFVQYANRSSAEEALVILQGT 363
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 364 LVGGQNVRLSWGRSPSNKQ 382
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 24/291 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L FS G L K+I+ ++ YGF+++ A +
Sbjct: 110 VRTLWIGDLQFWMEENYLYNCFSQAGELISAKIIRNKQTGQPEGYGFIEFGSHAIAEQVL 169
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
NG+ + Q K+NWA A +R D + +FVGDL+ +VTD L F +
Sbjct: 170 QGYNGQMMPNGNQVFKLNWATSGAGEKRGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQ 229
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V++D+ TGRS+G+GFV F + ++ A+ ++NG++ +R +R A+ G
Sbjct: 230 SVKGAKVVFDRSTGRSKGYGFVKFGDLDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGG 289
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
++Q S + + T+ SD P TTV+VG L VT L + F
Sbjct: 290 QQQPSATYQNTQGTDSDSD-------------PNNTTVFVGGLDPSVTDEVLKQAFSPY- 335
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV+YS A AI+M N L G+ I+ SWG P
Sbjct: 336 -GELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGSQLGGQSIRLSWGRSP 385
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 34/207 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS-----YGFVDYFD 94
R D + +++VG++ VT+ +LQ+ F + ++G K++ D+S+ YGFV + D
Sbjct: 197 RGDDGSDYTIFVGDLASDVTDLILQDTFKAHYQSVKGAKVV-FDRSTGRSKGYGFVKFGD 255
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWA---------------YASSQREDTSGHFN---VF 136
A+ +NG++ +P+++ A Y ++Q D+ N VF
Sbjct: 256 LDEQTRAMTEMNGQYCSSRPMRIGPASNKKNIGGQQQPSATYQNTQGTDSDSDPNNTTVF 315
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG L P VTD L FS + ++ ++ GFV + N+ A+ AI LNG
Sbjct: 316 VGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRC------GFVQYSNRASAEEAIRMLNG 369
Query: 197 KWLGNRQIRCNWAAKGATSGDEKQSSD 223
LG + IR +W G + G+++ D
Sbjct: 370 SQLGGQSIRLSW---GRSPGNKQPQQD 393
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 147/288 (51%), Gaps = 20/288 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
++++G + P V A +++V+ + G K+I+ DK S Y FVD F +AA +
Sbjct: 68 ALWMGELEPWVDEAFIRQVWFNLGEQVNVKMIR-DKFSGSNAGYCFVD-FSSTAAASKAL 125
Query: 104 TLNGRHIFG--QPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
+LNG I G + K+NWA + +++D F++FVGDL PEV + L + F S +P
Sbjct: 126 SLNGTIIPGTTRLFKLNWASGGGLTDRKDDREPEFSIFVGDLGPEVNEYLLVSLFQSRYP 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D + A+ ++ G + G+R IR + A G
Sbjct: 186 SCKSAKIMTDLVSGMSRGYGFVRFSDEVDQRRALTEMQGVYCGSRPIRISTATPKNKPGM 245
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ + L G + N+ NN TTV+VG LSS VT +L F
Sbjct: 246 SHINMMHMGMSPL--GYYGAPQPMNQFTDPNN---TTVFVGGLSSFVTEDELRSFFQGF- 299
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 300 -GEITYVKIPPGKGCGFVQFVQRHAAEMAISQMQGYPIGNSRVRLSWG 346
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 155/310 (50%), Gaps = 34/310 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
++++VG++ + L FS T + K+I+ ++ YGFV++ R +A A+
Sbjct: 119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQ 178
Query: 104 TLNGRHI--FGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFS-VFP 157
+ +G + QP ++NWA S+ + S + ++FVGDL+P+V+DA L F+ +P
Sbjct: 179 SFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYP 238
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA--KGATS 215
+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +RQ+R A + A
Sbjct: 239 SVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAY 298
Query: 216 GDEKQSSDSKSVVELTNGISD-----------------GQEKSNEDAPENNPQYTTVYVG 258
G + S + ++ N S+ G S D NN +T++VG
Sbjct: 299 GQQNGSQGLITCLDALNIASEVNCNVFIGLALTLAGGHGGNGSMSDGESNN---STIFVG 355
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
L ++VT DL + F G + V++ KG GFV+++ A AI N ++
Sbjct: 356 GLDADVTEEDLMQPFSDF--GEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKN 413
Query: 319 PIKCSWGSKP 328
++ SWG P
Sbjct: 414 TVRLSWGRSP 423
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIV 103
S +++VG + VT L + FS G + K+ + K GFV + +R+SA AI
Sbjct: 347 SNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGK---GCGFVQFANRQSAEEAIG 403
Query: 104 TLNGRHIFGQPIKVNWAYASSQ--REDTSGHFN 134
LNG I ++++W + ++ R D+ +N
Sbjct: 404 NLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQWN 436
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 152/321 (47%), Gaps = 39/321 (12%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
++P A P ++P A R++++G++ + L F+ TG + K+
Sbjct: 43 WNPQAAAPPSVQPTT---------ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKV 93
Query: 80 IKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASS-QREDTSG 131
I+ ++ YGF+++ +A + T N I P ++NWA SS + D S
Sbjct: 94 IRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSP 153
Query: 132 HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
+ +FVGDL+ +VTD L F + +P+ A+V+ D+ TGR++G+GFV F ++ + A
Sbjct: 154 DYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRA 213
Query: 191 INDLNGKWLGNRQIRCNWAA--KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN 248
+ ++NG R +R AA KG T + S + V +N
Sbjct: 214 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTT-----------------DN 256
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+P TTV+VG L + VT L F G I V++ K GFV++S A A++
Sbjct: 257 DPNNTTVFVGGLDASVTDDHLKNVFSQY--GEIVHVKIPAGKRCGFVQFSEKSCAEEALR 314
Query: 309 MGNARILCGKPIKCSWGSKPT 329
M N L G ++ SWG P+
Sbjct: 315 MLNGVQLGGTTVRLSWGRSPS 335
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + VT+ L+ VFS G + K+ + GFV + ++ A A+ LNG
Sbjct: 262 TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC--GFVQFSEKSCAEEALRMLNGV 319
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ G ++++W + S ++
Sbjct: 320 QLGGTTVRLSWGRSPSNKQ 338
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 148/296 (50%), Gaps = 20/296 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ V + L F+ TG + K+I+ + YGFV++ +A +
Sbjct: 19 VRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERIL 78
Query: 103 VTLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
T NG + G Q ++NWA +R D ++FVGDL+P+VTD L F +P
Sbjct: 79 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYP 138
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + R +R + AT
Sbjct: 139 SVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGXYCSTRPMRIS----AATPKK 194
Query: 218 EKQSSDSKSVVELTNGIS----DGQEKSNEDAPEN-NPQYTTVYVGNLSSEVTSVDLHRH 272
S + V++ N S S P + + TT++VGNL +T +L +
Sbjct: 195 PLVFSSNTVXVKVMNNESMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELKQT 254
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
F L G I V++ KG GFV++ T A AIQ +I+ + ++ SWG P
Sbjct: 255 F--LQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNP 308
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 43/214 (20%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA S++VG++ P VT+ LLQE F + P + G K++ + YGFV + D
Sbjct: 106 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADE 165
Query: 96 RSAALAIVTLNGRHIFGQPIKVNW----------------------------AYASS--- 124
A+ +NG + +P++++ AY +S
Sbjct: 166 NERNRAMSEMNGXYCSTRPMRISAATPKKPLVFSSNTVXVKVMNNESMYPVPAYTTSVPV 225
Query: 125 -QREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
+ + + +FVG+L P +T+ L F F + ++ +G GFV F
Sbjct: 226 LPADYDANNTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIP------AGKGCGFVQFGT 279
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+ AI + GK +G + +R +W A D
Sbjct: 280 RASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQD 313
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 38 LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRS 97
LP +DA+ +++VGN+ P +T L++ F G + K I K GFV + R S
Sbjct: 226 LPADYDANNT-TIFVGNLDPNITEEELKQTFLQFGEIAYVK-IPAGKGC-GFVQFGTRAS 282
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTS 130
A AI + G+ I Q ++ +W + ++D +
Sbjct: 283 AEEAIQKMQGKIIGQQVVRTSWGRNPAAKQDLT 315
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 145/291 (49%), Gaps = 11/291 (3%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
++++VG++ + L F TG ++ K+I+ ++ Y GFV++ +A +
Sbjct: 42 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHVAAEKIL 101
Query: 103 VTLNGRHIFG--QPIKVNWA-YASSQREDTSG-HFNVFVGDLSPEVTDATLFACFSV-FP 157
NG + QP ++NWA + +R +G ++FVGDL+P+VTD L F +P
Sbjct: 102 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 161
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + +R +R + A + G
Sbjct: 162 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGIYCSSRPMRISAATPKKSLGP 221
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ + V T Q +N+P TT++VG L V DL F
Sbjct: 222 NQLNPKVSPVAVATYAAYGAQPSPQAFPTDNDPNNTTIFVGGLDPAVGDEDLRNVFGQF- 280
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A A+Q + ++ + ++ SWG P
Sbjct: 281 -GELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSP 330
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 153/294 (52%), Gaps = 14/294 (4%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
++++VG++ + L F TG ++ K+I+ ++ Y GFV++ +A +
Sbjct: 7 VKTLWVGDLQYWMDENYLHTAFVHTGEVQSVKIIRNKQTGYSEGYGFVEFVSHAAAEKIL 66
Query: 103 VTLNGRHI--FGQPIKVNWA-YASSQREDTSG-HFNVFVGDLSPEVTDATLFACFSV-FP 157
NG + QP ++NWA + +R +G ++FVGDL+P+VTD L F +P
Sbjct: 67 QAYNGTQMPNTEQPFRLNWASFGIGERRPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYP 126
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + +R +R + A + G
Sbjct: 127 SVKGAKVVTDANTGRSKGYGFVRFGDEMERNRAMSEMNGVYCSSRPMRISAATPKKSLGP 186
Query: 218 EKQSS--DSKSVVELTNGISDGQEKSNEDAP-ENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
+ + D+ S V + + G + S + P +N+P TT++VG L V DL F
Sbjct: 187 AQLNPKVDAVSPVAVATYAAYGAQPSPQAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFG 246
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV+++ A A+Q + ++ + ++ SWG P
Sbjct: 247 QF--GELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQTVIGTQAVRLSWGRSP 298
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 49/222 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R +A S++VG++ P VT+ +LQE F + P ++G K++ + YGFV + D
Sbjct: 94 RPEAGPEHSIFVGDLAPDVTDYMLQETFRTRYPSVKGAKVVTDANTGRSKGYGFVRFGDE 153
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-------------------------YASSQREDTS 130
A+ +NG + +P++++ A YA+ + +
Sbjct: 154 MERNRAMSEMNGVYCSSRPMRISAATPKKSLGPAQLNPKVDAVSPVAVATYAAYGAQPSP 213
Query: 131 GHF---------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
F +FVG L P V D L F F ++ +G GFV F
Sbjct: 214 QAFPVDNDPNNTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIP------AGKGCGFVQF 267
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
++ A+ A+ L+ +G + +R +W G + G+ KQ++D
Sbjct: 268 THRACAEEALQRLHQTVIGTQAVRLSW---GRSPGN-KQTAD 305
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/310 (32%), Positives = 148/310 (47%), Gaps = 29/310 (9%)
Query: 39 PPRFDASTC--RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---------SSY 87
PP A+T R++++G+I P + +V++ T K+IK + S Y
Sbjct: 17 PPENPANTVPSRTLWMGDIEPWWNEEFITDVWAKTNKRVLVKVIKPRQNALVHQLAHSGY 76
Query: 88 GFVDYFDRRSAALAIVTLNGRHI---FGQPIKVNWAYASSQREDT--SGHFNVFVGDLSP 142
FV+ F+ A + LNG I + ++NWA A++ + +++FVGDLSP
Sbjct: 77 CFVE-FETPEDAKEALKLNGTIIPNTTDKLFRLNWASAATLNSQIAQTPEYSLFVGDLSP 135
Query: 143 EVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
T+A L A F F T RVM D TG SR FGFV F + ED Q A+ ++NGKWL
Sbjct: 136 ATTEAHLLALFQTHFSTVKTVRVMTDPATGLSRCFGFVRFSSDEDRQKALVEMNGKWLDG 195
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEK-SNEDAPENNPQY-----TTV 255
R IR A +Q + +EL + G AP+ P Y TTV
Sbjct: 196 RLIRV---ALATPKHQNQQFRKHQIPMELDPYHAPGLPPIGYYAAPQPPPAYSDPTNTTV 252
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VG LS+ +T L F G I V+V KG GFV+++ +A AI+ ++
Sbjct: 253 FVGGLSNNITEATLLSIFEPY--GQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQGYVI 310
Query: 316 CGKPIKCSWG 325
G ++ SWG
Sbjct: 311 DGSRVRLSWG 320
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 148/288 (51%), Gaps = 19/288 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P +T A++Q++++S G K+I+ S Y FV+ F+ ++A+ ++
Sbjct: 99 TLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVE-FNSPASAMKAMS 157
Query: 105 LNGRHIFG--QPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
LNG I G + K+NWA +RE + F++FVGDL PEVT+ L + F S + +
Sbjct: 158 LNGTVIPGTNRFFKLNWASGGGLHDRREGKTPEFSIFVGDLGPEVTEPMLLSLFQSRYRS 217
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
C A++M D T SRG+GFV F ++ D + A+ ++ G + GNR +R A S +
Sbjct: 218 CKSAKIMMDSNTNLSRGYGFVRFYDENDQKRALTEMQGVYCGNRPMRIAMATP--KSKNH 275
Query: 219 KQSSDSKSVVELTN-GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S + + L G + N+ +P TTV+VG LS VT +L F
Sbjct: 276 MYSPMNMMHIGLQPVGFYGAPQPVNQFT---DPTNTTVFVGGLSGYVTEEELRFLFQNF- 331
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ KG GFV++ A LAI L I+ SWG
Sbjct: 332 -GEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQGYPLGKSRIRLSWG 378
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 38/180 (21%)
Query: 127 EDTSGHFN--VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
++T+ H N +++G+L+P +T+A + ++ + +++ D+ +G + G+ FV F +
Sbjct: 90 DETASHNNSTLWMGELAPFITEAMVQQIWNSLGENVNVKIIRDRYSGLNAGYCFVEFNSP 149
Query: 185 EDAQSAINDLNGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSN 242
A A+ LNG + NR + NWA+ G G+ D +E
Sbjct: 150 ASAMKAM-SLNGTVIPGTNRFFKLNWASGG--------------------GLHDRREGK- 187
Query: 243 EDAPENNPQYTTVYVGNLSSEVT-----SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRY 297
P++ +++VG+L EVT S+ R+ + D +G+GFVR+
Sbjct: 188 ------TPEF-SIFVGDLGPEVTEPMLLSLFQSRYRSCKSAKIMMDSNTNLSRGYGFVRF 240
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 144/304 (47%), Gaps = 25/304 (8%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAAL 100
A + ++++G + P + ++ V+ G K+I+ + Y F+D+ +AA
Sbjct: 71 ADSKTTLWMGELEPWIDENFVRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDFTTPEAAAK 130
Query: 101 AIVTLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACF-S 154
A+ +LNG I +P K+NWA + +R+D F++FVGDL PEV + L + F S
Sbjct: 131 AL-SLNGSMIPNTSRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQS 189
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
FP+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 190 RFPSCKSAKIMTDPISGMSRGYGFVRFSDEGDQQRALTEMQGVYCGNRPMRISTATPKNK 249
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-------------NNPQYTTVYVGNLS 261
SG + G + + AP +P TTV+VG LS
Sbjct: 250 SGGGGPPGAMGGMPGAPMGGNMAPGMYSMGAPPIGYYGAPQPMNQFTDPNNTTVFVGGLS 309
Query: 262 SEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
VT +L F G I V++ KG GFV++ A +AI + ++
Sbjct: 310 GYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVR 367
Query: 322 CSWG 325
SWG
Sbjct: 368 LSWG 371
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 84/225 (37%), Gaps = 55/225 (24%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F S P I D S YGFV + D
Sbjct: 160 RDDRGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDE 219
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS------------------------- 130
A+ + G + +P++++ A ++
Sbjct: 220 GDQQRALTEMQGVYCGNRPMRISTATPKNKSGGGGPPGAMGGMPGAPMGGNMAPGMYSMG 279
Query: 131 ----GHFN---------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTG 171
G++ VFVG LS VT+ L + F F + ++
Sbjct: 280 APPIGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP------ 333
Query: 172 RSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+G GFV F + A+ AIN + G +GN ++R +W SG
Sbjct: 334 PGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 378
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 156/313 (49%), Gaps = 26/313 (8%)
Query: 27 APQIEPILSGNLPPR-FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS 85
AP +P PP+ A R++++G++ + L F+ TG L K+I+ ++
Sbjct: 43 APSAQPPSQSVAPPQPTSADEVRTLWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQT 102
Query: 86 S----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFV 137
S YGF+++ R A + T NG + GQ ++NWA A +R D S +FV
Sbjct: 103 SQSEGYGFIEFTSRAGAERVLQTYNGTIMPNGGQNFRLNWATFSAGERRHDDSPDHTIFV 162
Query: 138 GDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
GDL+ +VTD L F +P+ A+V+ D+ TGR++G+GFV F ++ + A++++ G
Sbjct: 163 GDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMSEMQG 222
Query: 197 KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVY 256
R +R A+ ++ S+ S+ N Q NE P N TT++
Sbjct: 223 VLCSTRPMRIGPAS------NKNPSTQSQPKASYQNP----QGAQNEHDPNN----TTIF 268
Query: 257 VGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILC 316
VGNL VT L + F G + V++ K GFV+++ A A+++ N +L
Sbjct: 269 VGNLDPNVTDDHLRQVFGQY--GELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLG 326
Query: 317 GKPIKCSWGSKPT 329
G+ ++ SWG P+
Sbjct: 327 GQNVRLSWGRSPS 339
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL + + L+ CF+ + +V+ +++T +S G+GF+ F ++ A+ +
Sbjct: 67 LWIGDLQYWMDENYLYTCFAHTGELASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQTY 126
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + G + R NWA A E+ ++D+P++
Sbjct: 127 NGTIMPNGGQNFRLNWATFSAG------------------------ERRHDDSPDH---- 158
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALC-----VGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
T++VG+L+++VT L F A + D R KG+GFVR+ E A+
Sbjct: 159 -TIFVGDLAADVTDYLLQETFRARYPSAKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAM 217
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
+ +P++ S P T S P
Sbjct: 218 SEMQGVLCSTRPMRIGPASNKN-PSTQSQP 246
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ P VT+ L++VF G L K+ + GFV + DR A A+ LNG
Sbjct: 266 TIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRC--GFVQFADRSCAEEALRVLNGT 323
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 324 LLGGQNVRLSWGRSPSNKQ 342
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 147/290 (50%), Gaps = 26/290 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F+ TG ++ KLI+ ++ YGFV++ R A +
Sbjct: 97 VRTLWIGDLQYWMDENYVYGCFAHTGEVQSVKLIRDKQTGQLQGYGFVEFTTRAGAERVL 156
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + P ++NWA A +R+D + +FVGDL+ +VTD L F V +P+
Sbjct: 157 QTYNGATMPNVEMPYRLNWASAGEKRDDGP-DYTIFVGDLAADVTDYILQETFRVHYPSV 215
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA +++
Sbjct: 216 KGAKVVTDKLTMRSKGYGFVKFSDPTEQTRAMTEMNGMVCSSRPMRIGPAA------NKQ 269
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S ++ V G+ + SN TT++VG L VT L + F G
Sbjct: 270 KVSGAQEKVPSAQGVQSDSDPSN----------TTIFVGGLDPNVTEDMLKQVFAPY--G 317
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV+Y++ + A+ M ++ G+ ++ SWG P+
Sbjct: 318 EVVHVKIPVGKRCGFVQYASRSSSEEALLMLQGTVIGGQNVRLSWGRSPS 367
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT +L++VF+ G + K+ + GFV Y R S+ A++ L G
Sbjct: 294 TIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRC--GFVQYASRSSSEEALLMLQGT 351
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 352 VIGGQNVRLSWGRSPSNKQ 370
>gi|170589631|ref|XP_001899577.1| RNA recognition motif. [Brugia malayi]
gi|158593790|gb|EDP32385.1| RNA recognition motif [Brugia malayi]
Length = 287
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 42/222 (18%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVF--------------------PTC-SDA 162
S + DTS +++VFVGDLS EV + TL A F F +C S+A
Sbjct: 76 SPKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEA 135
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V+ D +T +S+G+GFVSF +E+AQ AI ++NG+ +G RQIR NWA + G+E +
Sbjct: 136 KVIRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRKFDGGEENVTY 195
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
D+ I + +N T+VYVG +S T +L + F A + T+
Sbjct: 196 DN---------IFNATHAAN----------TSVYVGGISPITTDEELMQSFSA--IATVI 234
Query: 283 DVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
+VR+ + +G+ FVRY AA AI N +++ G+ I+CSW
Sbjct: 235 EVRLFKQQGYAFVRYLNKDAAARAIMSMNGKVINGQKIRCSW 276
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 43/207 (20%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGC---------------------K 78
P+ D S V+VG++ +V N L+ F S G + K
Sbjct: 77 PKVDTSKNYHVFVGDLSTEVNNCTLKAAFESFGEISSVFRPSYNLPLYTLASLSCFSEAK 136
Query: 79 LIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA------------YA 122
+I+ ++ YGFV + + +A AI +NG+ I + I+ NWA Y
Sbjct: 137 VIRDPQTLKSKGYGFVSFPVKENAQKAIEEMNGQMIGRRQIRTNWAVRKFDGGEENVTYD 196
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+ + + +V+VG +SP TD L FS T + R+ Q G+ FV +
Sbjct: 197 NIFNATHAANTSVYVGGISPITTDEELMQSFSAIATVIEVRLFKQQ------GYAFVRYL 250
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWA 209
N++ A AI +NGK + ++IRC+W+
Sbjct: 251 NKDAAARAIMSMNGKVINGQKIRCSWS 277
>gi|388508506|gb|AFK42319.1| unknown [Lotus japonicus]
Length = 103
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/105 (72%), Positives = 82/105 (78%), Gaps = 4/105 (3%)
Query: 309 MGNAR-ILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIA 367
MGN + ILCGK IKCSWGSKPTPPGT+S PLPPP LPGFSATDL AYERQ+A+SK+
Sbjct: 1 MGNTQSILCGKQIKCSWGSKPTPPGTASNPLPPPAPATLPGFSATDLLAYERQLAMSKMG 60
Query: 368 GAQALMHPQAQHALKLGMGAAGASQAIYDSSGFQNVATTQQLMYY 412
G ALMHPQ QH LK A GASQAIYD GFQNVA QQ+MYY
Sbjct: 61 GVHALMHPQGQHPLK--QAAIGASQAIYD-GGFQNVAAAQQMMYY 102
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 159/320 (49%), Gaps = 31/320 (9%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDAST--CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
P + AP +P L P+ AS R++++G++ + L F+ TG + K+
Sbjct: 44 PQPMWAPSAQPPL-----PQQPASADEVRTLWIGDLQYWMDENYLYTCFAHTGEVSSVKV 98
Query: 80 IKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTS 130
I+ ++S YGF+++ R A + T NG + GQ ++NWA S+ R+D S
Sbjct: 99 IRNKQTSQSEGYGFIEFNSRAGAERILQTYNGAIMPNGGQSFRLNWATFSAGERSRQDDS 158
Query: 131 GHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQS 189
+ +FVGDL+ +VTD L F + + A+V+ D+ TGR++G+GFV F + +
Sbjct: 159 PDYTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMR 218
Query: 190 AINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN 249
A+ ++ G R +R A+ ++ ++ S+ N G + EN+
Sbjct: 219 AMTEMQGVLCSTRPMRIGPAS------NKTPATQSQPKASYLNSQPQGSQN------END 266
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
P TT++VGNL VT L + F G + V++ K GFV+++ A A+++
Sbjct: 267 PNNTTIFVGNLDPNVTDDHLRQVFSQY--GELVHVKIPAGKRCGFVQFADRSCAEEALRV 324
Query: 310 GNARILCGKPIKCSWGSKPT 329
N +L G+ ++ SWG P+
Sbjct: 325 LNGTLLGGQNVRLSWGRSPS 344
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL + + L+ CF+ S +V+ +++T +S G+GF+ F ++ A+ +
Sbjct: 69 LWIGDLQYWMDENYLYTCFAHTGEVSSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTY 128
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + G + R NWA S G+ +D+P+
Sbjct: 129 NGAIMPNGGQSFRLNWAT-----------------------FSAGERSRQDDSPD----- 160
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALC-----VGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
T++VG+L+++VT L F A + D R KG+GFVR+S E A+
Sbjct: 161 YTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSEESEQMRAM 220
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
+ +P++ S T P T S P
Sbjct: 221 TEMQGVLCSTRPMRIGPASNKT-PATQSQP 249
>gi|212722596|ref|NP_001131852.1| uncharacterized protein LOC100193230 [Zea mays]
gi|194692726|gb|ACF80447.1| unknown [Zea mays]
gi|413919585|gb|AFW59517.1| hypothetical protein ZEAMMB73_768040 [Zea mays]
Length = 434
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 27/287 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALA 101
R++++G++ + + + FS+TG ++ KLI+ DK+S YGFV++ R +A
Sbjct: 85 VRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 143
Query: 102 IVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 202
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA +G
Sbjct: 203 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAG-- 260
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
VV+ S G + EN+P TT++VG L VT L + F
Sbjct: 261 -------GVVQERVPNSQGAQS------ENDPNNTTIFVGGLDPNVTEDVLKQAFSPY-- 305
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ K GFV++ T P A A+ M ++ + ++ SWG
Sbjct: 306 GEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWG 352
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 29/189 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDK-----SSYGFVDYFDRR 96
D + +++VG++ VT+ LLQE F P ++G K++ DK YGFV + D
Sbjct: 171 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVT-DKLTMRTKGYGFVKFGDPT 229
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYA----------------SSQREDTSGHFNVFVGDL 140
A A+ +NG +P+++ A + +Q E+ + +FVG L
Sbjct: 230 EQARAMTEMNGMPCSSRPMRIGPAASRKNAGGVVQERVPNSQGAQSENDPNNTTIFVGGL 289
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P VT+ L FS + ++ ++ G FV F + A+ A+ L G +G
Sbjct: 290 DPNVTEDVLKQAFSPYGEVIHVKIPVGKRCG------FVQFVTRPSAEQALLMLQGALIG 343
Query: 201 NRQIRCNWA 209
+ +R +W
Sbjct: 344 AQNVRLSWG 352
>gi|413919584|gb|AFW59516.1| hypothetical protein ZEAMMB73_768040, partial [Zea mays]
Length = 428
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 27/287 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALA 101
R++++G++ + + + FS+TG ++ KLI+ DK+S YGFV++ R +A
Sbjct: 85 VRTLWIGDLQYWMDDNYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 143
Query: 102 IVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 144 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 202
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA +G
Sbjct: 203 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNAG-- 260
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
VV+ S G + EN+P TT++VG L VT L + F
Sbjct: 261 -------GVVQERVPNSQGAQS------ENDPNNTTIFVGGLDPNVTEDVLKQAFSPY-- 305
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ K GFV++ T P A A+ M ++ + ++ SWG
Sbjct: 306 GEVIHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWG 352
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 29/189 (15%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDK-----SSYGFVDYFDRR 96
D + +++VG++ VT+ LLQE F P ++G K++ DK YGFV + D
Sbjct: 171 DDTPDYTIFVGDLAADVTDYLLQETFRVHYPSVKGAKVVT-DKLTMRTKGYGFVKFGDPT 229
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYA----------------SSQREDTSGHFNVFVGDL 140
A A+ +NG +P+++ A + +Q E+ + +FVG L
Sbjct: 230 EQARAMTEMNGMPCSSRPMRIGPAASRKNAGGVVQERVPNSQGAQSENDPNNTTIFVGGL 289
Query: 141 SPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P VT+ L FS + ++ ++ G FV F + A+ A+ L G +G
Sbjct: 290 DPNVTEDVLKQAFSPYGEVIHVKIPVGKRCG------FVQFVTRPSAEQALLMLQGALIG 343
Query: 201 NRQIRCNWA 209
+ +R +W
Sbjct: 344 AQNVRLSWG 352
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 151/298 (50%), Gaps = 27/298 (9%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
S ++++VG++ + L F+STG + K+I+ ++ YGFV++F +A
Sbjct: 89 SENKTIWVGDLQHWMDENYLHSCFASTGEISSLKVIRNKQTGISEGYGFVEFFSHTTAEK 148
Query: 101 ------AIVTLNGRHIFGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFAC 152
+I+ N F ++NWA S+ +R + ++FVGDL+ +VTD+ L
Sbjct: 149 VLQNYSSILMPNTEQAF----RLNWATFSTGDKRSENGSDLSIFVGDLAADVTDSVLHET 204
Query: 153 F-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F S + + A+V++D TG S+G+GFV F + + A+ ++NG + +R +R A
Sbjct: 205 FASKYSSVKAAKVVYDPNTGCSKGYGFVRFGDDNERSQAMTEMNGIYCSSRPMRIGAATP 264
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
+SG ++Q S S +NG +S+ D TT+++G L VT DL +
Sbjct: 265 KKSSGYQQQYS---SQGYASNGSFSHGHQSDGDFTN-----TTIFIGGLDPNVTDEDLKQ 316
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F G I V++ KG GF++++ A A+Q N ++ + ++ SWG PT
Sbjct: 317 LFSQH--GEIVSVKIPVGKGCGFIQFANRKNAEEALQKLNGTVIGKQTVRLSWGRSPT 372
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
T ++++G + P VT+ L+++FS G + K+ GF+ + +R++A A+ L
Sbjct: 296 TNTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGC--GFIQFANRKNAEEALQKL 353
Query: 106 NGRHIFGQPIKVNWAYASSQRE 127
NG I Q ++++W + + ++
Sbjct: 354 NGTVIGKQTVRLSWGRSPTNKQ 375
>gi|213515090|ref|NP_001135023.1| cytotoxic granule-associated RNA binding protein 1 [Salmo salar]
gi|209738084|gb|ACI69911.1| Nucleolysin TIA-1 [Salmo salar]
Length = 409
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 153/322 (47%), Gaps = 31/322 (9%)
Query: 32 PILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG--CKLIKKDKSS--- 86
PI S +L S ++++GNIH V +L + P +G CKL +S
Sbjct: 6 PIYSASLAADIPQSGS-TLHIGNIHSAVDENVLVSILQQFFPGQGFQCKLFPDPNNSPDL 64
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASS----QREDTSGHFNVFVGDLSP 142
Y F+ + D +A A+ LNGR + G+ +KV+WA + Q + + +++VGDL
Sbjct: 65 YCFMTFADVNTATSALSILNGREVMGKKLKVSWASGGAGQFKQSQISGTTHSIYVGDLPH 124
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E D L F F +RV+ D ++G S+GFGF+ +R+Q +A+ AI ++G + ++
Sbjct: 125 ECDDNMLAQAFRPFGEVLSSRVVRDPESGLSKGFGFIVYRHQYEAEEAIQKMHGGTISSK 184
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
++ +WA + S + SV +L N+ ++ TT+YVGNL
Sbjct: 185 SVKVSWATR---------SKATTSVPQL---------NYNDVYQQSGAHNTTLYVGNLPE 226
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+ L F G + D ++ DK F F++ TH AA +I N + + G +K
Sbjct: 227 SMKEQFLISFFEPY--GAVLDTKIFHDKHFAFIKMDTHEAAATSIVKCNGQPVDGCVMKV 284
Query: 323 SWGSKPTPPGTSSTPLPPPPAP 344
W S+ P + P P P P
Sbjct: 285 -WWSRDNPNLQGNMPSNPAPQP 305
>gi|293336608|ref|NP_001168401.1| uncharacterized protein LOC100382170 [Zea mays]
gi|223948043|gb|ACN28105.1| unknown [Zea mays]
gi|414585352|tpg|DAA35923.1| TPA: hypothetical protein ZEAMMB73_028165 [Zea mays]
Length = 432
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 27/287 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALA 101
R++++G++ + + FS+TG ++ KLI+ DK+S YGFV++ R +A
Sbjct: 91 VRTLWIGDLQYWMDENYVFGCFSNTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 149
Query: 102 IVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ T NG+ + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 150 LQTYNGQMMPNVDLTFRLNWASAGEKRDDTP-EYTIFVGDLAADVTDYLLQETFRVHYPS 208
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA +G
Sbjct: 209 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTG-- 266
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
VV+ S G + EN+P TT++VG L VT L + F
Sbjct: 267 -------GVVQERVPNSQGAQS------ENDPNNTTIFVGGLDPNVTEDTLKQVFSPY-- 311
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ K GFV++ T P A A+ M ++ + ++ SWG
Sbjct: 312 GEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWG 358
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT L++VFS G + K+ + GFV + R SA A++ L G
Sbjct: 289 TIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC--GFVQFVTRPSAEQALLMLQGA 346
Query: 109 HIFGQPIKVNWAYASSQRE 127
I Q ++++W + S ++
Sbjct: 347 LIGAQNVRLSWGRSLSNKQ 365
>gi|242074396|ref|XP_002447134.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
gi|241938317|gb|EES11462.1| hypothetical protein SORBIDRAFT_06g029180 [Sorghum bicolor]
Length = 440
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 27/287 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALA 101
R++++G++ + + + F STG ++ KLI+ DK+S YGFV++ R +A
Sbjct: 91 VRTLWIGDLQYWMDESYVLGCFLSTGEVQNVKLIR-DKNSGQLQGYGFVEFTSRAAAERV 149
Query: 102 IVTLNGRHIFGQPI--KVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ T NG+ + + ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 150 LQTYNGQMMPNVELTFRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYLLQETFRVHYPS 208
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ T R++G+GFV F + + A+ ++NG +R +R AA +G
Sbjct: 209 VKGAKVVTDKLTMRTKGYGFVKFGDPTEQARAMTEMNGMPCSSRPMRIGPAASRKNTG-- 266
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
VV+ S G + EN+P TT++VG L VT L + F
Sbjct: 267 -------GVVQERVPNSQGAQS------ENDPNNTTIFVGGLDPNVTEDTLKQVFSPY-- 311
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G + V++ K GFV++ T P A A+ M ++ + ++ SWG
Sbjct: 312 GEVVHVKIPVGKRCGFVQFVTRPSAEQALLMLQGALIGAQNVRLSWG 358
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT L++VFS G + K+ + GFV + R SA A++ L G
Sbjct: 289 TIFVGGLDPNVTEDTLKQVFSPYGEVVHVKIPVGKRC--GFVQFVTRPSAEQALLMLQGA 346
Query: 109 HIFGQPIKVNWAYASSQRE 127
I Q ++++W + S ++
Sbjct: 347 LIGAQNVRLSWGRSLSNKQ 365
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 150/298 (50%), Gaps = 17/298 (5%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
R++++G++ + L+ +F+ TG + K+I+ ++ Y GF+++ +A +
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ NG + Q ++NWA +R D ++FVGDL+P+VTD L F FP
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA------AK 211
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + +R +R + A A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
G T+ ++ +S P+++P TT++VG L +T ++ +
Sbjct: 207 GLTTVTAATIVPQPTIASPITPPPSLSIQSQVLPPDSDPTNTTIFVGGLDLNITEEEVKQ 266
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
F +G + V++ KG FV+Y+ A A+Q + ++ + I+ SWG PT
Sbjct: 267 TFSH--IGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSWGRSPT 322
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 147/296 (49%), Gaps = 28/296 (9%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAA 99
A R++++G++ + + F+ TG + K+I+ ++S YGF++ +A
Sbjct: 46 ADEVRTLWIGDLQYWMDENYIASCFAHTGEVASVKIIRNKQTSQIEGYGFIEMTSHGAAE 105
Query: 100 LAIVTLNGRHIFG--QPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
+ T NG + Q ++NWA ++ + D S F +FVGDL+ +VTD L F
Sbjct: 106 RILQTYNGTPMPNGEQNFRLNWASFSGGDKRDDSPDFTIFVGDLAADVTDFMLQETFRAH 165
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
FP+ A+V+ D+ TGR++G+GFV F ++ + A+ ++NG + R +R A
Sbjct: 166 FPSVKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGAFCSTRPMRVGLA------ 219
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN--NPQYTTVYVGNLSSEVTSVDLHRHF 273
S+ K+VV G + P+N +P TT++VGNL S V L F
Sbjct: 220 ------SNKKAVV----GQQYPKASYQNPQPQNDGDPNNTTIFVGNLDSNVMDDHLKELF 269
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A++M N L G+ I+ SWG P+
Sbjct: 270 GQY--GQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGAQLSGQNIRLSWGRNPS 323
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ V + L+E+F G L K+ + GFV + DR SA A+ LNG
Sbjct: 250 TIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRC--GFVQFADRSSAEEALKMLNGA 307
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ I+++W S ++
Sbjct: 308 QLSGQNIRLSWGRNPSNKQ 326
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 149/324 (45%), Gaps = 41/324 (12%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDY 92
+ G L P D + RSV+ G + QV ++++ FS + + Y FVD+
Sbjct: 83 LWMGELEPWIDENFIRSVWFGMGY-QVNVKMIRDKFSGS------------NAGYCFVDF 129
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTD 146
+ SAA A+ LNG+ I + K+NWA A R+D +++FVGDL PEV +
Sbjct: 130 ENPDSAARALA-LNGQMIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNE 188
Query: 147 ATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L + F + +P+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R
Sbjct: 189 YVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADETDQQKALHEMQGVYCGNRPMR 248
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-------------NNPQY 252
+ A K + + GQ + AP +P
Sbjct: 249 ISTATP-----KNKSGGAGGPGMGGMQQVPGGQGMYSMGAPPMGYYGAPQPMNQFTDPNN 303
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 304 TTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQG 361
Query: 313 RILCGKPIKCSWGSKPTPPGTSST 336
+ ++ SWG G + T
Sbjct: 362 YPIGNSRVRLSWGRSQNNSGPAGT 385
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 31/291 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV+++ SA A+
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQTEGYGFVEFYSHASADKALQ 163
Query: 104 TLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
G + +P K+NWA S +R + ++FVGDL+ +VTD L F S + +
Sbjct: 164 NFTGHAMPNTDRPFKLNWASYSMGEKRSEVVSDHSIFVGDLAADVTDEMLMELFASKYRS 223
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D TGRSRG+GFV F D A+ ++NG + R IR A T+GD
Sbjct: 224 VKGAKVIIDANTGRSRGYGFVRFGEDSDKSRAMTEMNGVYCSTRPIRIGPATPRRTAGDS 283
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
S T G SDG + TVYVG L V+ +L + F
Sbjct: 284 GSS---------TPGHSDGDSTNR-----------TVYVGGLDPNVSEDELRKSFAKY-- 321
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ + K GFV+Y +A A+Q N ++ + ++ SWG P+
Sbjct: 322 GDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVIGKQAVRLSWGRSPS 372
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 90/185 (48%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + + S++VG++ VT+ +L E+F+S ++G K+I + YGFV + +
Sbjct: 190 RSEVVSDHSIFVGDLAADVTDEMLMELFASKYRSVKGAKVIIDANTGRSRGYGFVRFGED 249
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A A T GH + V+VG L P V
Sbjct: 250 SDKSRAMTEMNGVYCSTRPIRIGPATPRRTAGDSGSSTPGHSDGDSTNRTVYVGGLDPNV 309
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ GFV + N+ DA+ A+ LNG +G + +
Sbjct: 310 SEDELRKSFAKYGDVASVKIPQGKQC------GFVQYVNRTDAEEALQGLNGSVIGKQAV 363
Query: 205 RCNWA 209
R +W
Sbjct: 364 RLSWG 368
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST R+VYVG + P V+ L++ F+ G + K+ + + GFV Y +R A A+
Sbjct: 295 STNRTVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQC--GFVQYVNRTDAEEALQG 352
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 353 LNGSVIGKQAVRLSWGRSPSHKQ 375
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 22/296 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA ++
Sbjct: 67 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 125
Query: 105 LNGRHI--FGQPIKVNWAYASS----QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
+NG + +P K+NWA RED + +++FVGDL PEV + L + F S FP
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA---KGAT 214
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A KG +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPS 245
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDL 269
+ + G AP+ +P TTV+VG LS VT +L
Sbjct: 246 GAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 305
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 306 RSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 22/296 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA ++
Sbjct: 67 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 125
Query: 105 LNGRHI--FGQPIKVNWAYASS----QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
+NG + +P K+NWA RED + +++FVGDL PEV + L + F S FP
Sbjct: 126 VNGTPMPNTNRPFKLNWATGGGLSDRSREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA---KGAT 214
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A KG +
Sbjct: 186 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPS 245
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDL 269
+ + G AP+ +P TTV+VG LS VT +L
Sbjct: 246 GAPGQMGMPGAPPAGMYPPAMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 305
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 306 RSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
>gi|158287021|ref|XP_309081.4| AGAP005292-PA [Anopheles gambiae str. PEST]
gi|157019814|gb|EAA04819.5| AGAP005292-PA [Anopheles gambiae str. PEST]
Length = 394
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 111/200 (55%), Gaps = 12/200 (6%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
H+++FVGDLSPE+ TL F+ F SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 79 HYHIFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAI 138
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + + + ++ + E+ N+ +P N
Sbjct: 139 AAMNGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVY----------NQSSPTNCTV 188
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
Y G L+ + L + F GTI+++RV +DKG+ FVR+ST A AI +
Sbjct: 189 YCGGIGGTLAGGLNEDILQKTFSPF--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVH 246
Query: 312 ARILCGKPIKCSWGSKPTPP 331
+ + +KCSWG + P
Sbjct: 247 NSEINSQTVKCSWGKESGDP 266
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 34/193 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ P++ L+E F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 82 IFVGDLSPEIETQTLKEAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKTEAENAIAAM 141
Query: 106 NGRHIFGQPIKVNWA---------------------YASSQREDTSGHFNVFVGDLSPEV 144
NG+ + + I+ NWA Y S + + + G L+ +
Sbjct: 142 NGQWLGSRSIRTNWATRKPPASKNEINAKPLTFDEVYNQSSPTNCTVYCGGIGGTLAGGL 201
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
+ L FS F T + RV D +G+ FV F +E A AI ++ + ++ +
Sbjct: 202 NEDILQKTFSPFGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVHNSEINSQTV 255
Query: 205 RCNWAAKGATSGD 217
+C+W G SGD
Sbjct: 256 KCSW---GKESGD 265
>gi|414886904|tpg|DAA62918.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 484
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 26/294 (8%)
Query: 47 CRSVYVGNI-HPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
R++++G++ H N L F++ + K+I+ ++ YGF++++ R +A
Sbjct: 113 VRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAAEH 172
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
++ NG+ + K+NWA AS+ +R D+ +FVGDL+ +VTD+ L F
Sbjct: 173 TLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAK 232
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A V+ D+ TG +GFGFV F + + A+ ++NG L RQ+R AA
Sbjct: 233 YPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAAN---- 288
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNE-DAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
K++ D++ +DG +S++ ++ EN+P TTV+VG L S V L + F
Sbjct: 289 ---KKNRDAQQTY-----ATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIF- 339
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++++ A AI+M N + G+ ++ SWG P
Sbjct: 340 -TPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSP 392
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R D+ + R+++VG++ VT+++L++VF + P + G ++ + +GFV + D
Sbjct: 202 RGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDL 261
Query: 96 RSAALAIVTLNGRHIFGQPIKV-----------------NWAYASSQ---REDTSGHFNV 135
A A+ +NG + + +++ + AY SS+ E+ + V
Sbjct: 262 NEQARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTV 321
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVG L V + L F+ + S ++ + GFV F ++ A+ AI LN
Sbjct: 322 FVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC------GFVQFTSRSCAEEAIRMLN 375
Query: 196 GKWLGNRQIRCNWA 209
G +G +++R +W
Sbjct: 376 GSQVGGQKVRLSWG 389
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + V L+++F+ G + K+ GFV + R A AI LNG
Sbjct: 320 TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAIRMLNGS 377
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + R+
Sbjct: 378 QVGGQKVRLSWGRSPQNRQ 396
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 158/335 (47%), Gaps = 36/335 (10%)
Query: 13 QQQSLYQY-HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSST 71
QQQ +Q P++ AAPQ P ++++G + P + ++ ++
Sbjct: 38 QQQMAFQSPDPNVNAAPQ----------PGSGGEQKTTLWMGELEPWIDENFVRNLWFQM 87
Query: 72 GPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFG--QPIKVNWAYA--- 122
G K+I+ + Y FVD+ ++AA A+ L+G+ + +P K+NWA
Sbjct: 88 GEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKAL-QLSGQPMPNSTRPFKLNWATGGGL 146
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSF 181
+ +R+D +++FVGDL PEV + L + F S FP+C A++M D +G SRG+GFV F
Sbjct: 147 ADRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVRF 206
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAA--------KGATSGDEKQSSDSKSVVELTNG 233
++ D Q A+ ++ G + GNR +R + A +GA G +
Sbjct: 207 SDEGDQQRALTEMQGVYCGNRPMRISTATPKNKGLPMQGANMGMPGPAGPMGYPPMGGPP 266
Query: 234 ISDGQEKSNEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK 290
+ ++ P N +P TTV+VG LS VT +L F G I V++ K
Sbjct: 267 MPYYGQQQTPQ-PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGK 323
Query: 291 GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G GFV++ A +AI + ++ SWG
Sbjct: 324 GCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 358
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 83/222 (37%), Gaps = 52/222 (23%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F S P I D S YGFV + D
Sbjct: 150 RDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPLSGMSRGYGFVRFSDE 209
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG------------------------ 131
A+ + G + +P++++ A ++ G
Sbjct: 210 GDQQRALTEMQGVYCGNRPMRISTATPKNKGLPMQGANMGMPGPAGPMGYPPMGGPPMPY 269
Query: 132 -----------------HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSR 174
+ VFVG LS VT+ L + F F + ++ +
Sbjct: 270 YGQQQTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP------PGK 323
Query: 175 GFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
G GFV F + A+ AIN + G +GN ++R +W SG
Sbjct: 324 GCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 365
>gi|195391714|ref|XP_002054505.1| GJ22770 [Drosophila virilis]
gi|194152591|gb|EDW68025.1| GJ22770 [Drosophila virilis]
Length = 401
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 16/198 (8%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 66 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 125
Query: 192 NDLNGKWLGNRQIRCNWAAKG--ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENN 249
+NG+WLG+R IR NWA + AT D ++ LT E N+ +P N
Sbjct: 126 TAMNGQWLGSRSIRTNWATRKPPATKAD-------MNIKPLTF-----DEVYNQSSPTNC 173
Query: 250 PQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
Y G LS + L + F GTI+++RV +DKG+ FVR+ST A AI
Sbjct: 174 TVYCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVA 231
Query: 310 GNARILCGKPIKCSWGSK 327
N + +P+KC+WG +
Sbjct: 232 VNNTEINQQPVKCAWGKE 249
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L++ F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 69 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 128
Query: 106 NGRHIFGQPIKVNWA---------------------YASSQREDTSGHFNVFVGDLSPEV 144
NG+ + + I+ NWA Y S + + + G LS +
Sbjct: 129 NGQWLGSRSIRTNWATRKPPATKADMNIKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 188
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
+ L FS + T + RV D +G+ FV F +E A AI +N + + +
Sbjct: 189 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 242
Query: 205 RCNWAAKGATSGDEKQSS 222
+C W G SGD S
Sbjct: 243 KCAW---GKESGDPNHMS 257
>gi|226491568|ref|NP_001142233.1| uncharacterized protein LOC100274401 [Zea mays]
gi|194707728|gb|ACF87948.1| unknown [Zea mays]
gi|414886903|tpg|DAA62917.1| TPA: hypothetical protein ZEAMMB73_604225 [Zea mays]
Length = 465
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 26/294 (8%)
Query: 47 CRSVYVGNI-HPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
R++++G++ H N L F++ + K+I+ ++ YGF++++ R +A
Sbjct: 113 VRTLWIGDLQHWMDENYLHYNAFAAVAQQIASVKIIRNKQTGHSEGYGFIEFYSRAAAEH 172
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
++ NG+ + K+NWA AS+ +R D+ +FVGDL+ +VTD+ L F
Sbjct: 173 TLMNFNGQMMPNVEMTFKLNWASASTGDKRGDSGSDRTIFVGDLAHDVTDSMLEDVFRAK 232
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A V+ D+ TG +GFGFV F + + A+ ++NG L RQ+R AA
Sbjct: 233 YPSVRGANVVVDRMTGWPKGFGFVRFGDLNEQARAMTEMNGMLLSTRQMRIGAAAN---- 288
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNE-DAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
K++ D++ +DG +S++ ++ EN+P TTV+VG L S V L + F
Sbjct: 289 ---KKNRDAQQTY-----ATDGAYQSSKGNSSENDPNNTTVFVGGLDSNVNEEYLRQIF- 339
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++++ A AI+M N + G+ ++ SWG P
Sbjct: 340 -TPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIRMLNGSQVGGQKVRLSWGRSP 392
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 31/194 (15%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R D+ + R+++VG++ VT+++L++VF + P + G ++ + +GFV + D
Sbjct: 202 RGDSGSDRTIFVGDLAHDVTDSMLEDVFRAKYPSVRGANVVVDRMTGWPKGFGFVRFGDL 261
Query: 96 RSAALAIVTLNGRHIFGQPIKV-----------------NWAYASSQ---REDTSGHFNV 135
A A+ +NG + + +++ + AY SS+ E+ + V
Sbjct: 262 NEQARAMTEMNGMLLSTRQMRIGAAANKKNRDAQQTYATDGAYQSSKGNSSENDPNNTTV 321
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
FVG L V + L F+ + S ++ G+ GFV F ++ A+ AI LN
Sbjct: 322 FVGGLDSNVNEEYLRQIFTPYGEISYVKI----PVGKH--CGFVQFTSRSCAEEAIRMLN 375
Query: 196 GKWLGNRQIRCNWA 209
G +G +++R +W
Sbjct: 376 GSQVGGQKVRLSWG 389
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + V L+++F+ G + K+ GFV + R A AI LNG
Sbjct: 320 TVFVGGLDSNVNEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAIRMLNGS 377
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + R+
Sbjct: 378 QVGGQKVRLSWGRSPQNRQ 396
>gi|386766659|ref|NP_001163756.2| CG34354, isoform E [Drosophila melanogaster]
gi|386766661|ref|NP_001163755.2| CG34354, isoform D [Drosophila melanogaster]
gi|383292995|gb|ACZ95050.2| CG34354, isoform E [Drosophila melanogaster]
gi|383292996|gb|ACZ95049.2| CG34354, isoform D [Drosophila melanogaster]
Length = 431
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 12/200 (6%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + + ++ + E+ N+ +P N
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEV----------YNQSSPTNCTV 204
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
Y G LS + L + F GTI+++RV +DKG+ FVR+ST A AI N
Sbjct: 205 YCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVN 262
Query: 312 ARILCGKPIKCSWGSKPTPP 331
+ +P+KC+WG + P
Sbjct: 263 NTEINQQPVKCAWGKESGDP 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L++ F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 106 NGRHIFGQPIKVNWA---------------------YASSQREDTSGHFNVFVGDLSPEV 144
NG+ + + I+ NWA Y S + + + G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
+ L FS + T + RV D +G+ FV F +E A AI +N + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 205 RCNWAAKGATSGDEKQSS 222
+C W G SGD S
Sbjct: 272 KCAW---GKESGDPNHMS 286
>gi|161078704|ref|NP_001097953.1| CG34354, isoform A [Drosophila melanogaster]
gi|158030423|gb|ABW08789.1| CG34354, isoform A [Drosophila melanogaster]
Length = 525
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 12/200 (6%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 95 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 154
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + + ++ + E+ N+ +P N
Sbjct: 155 TAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEV----------YNQSSPTNCTV 204
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
Y G LS + L + F GTI+++RV +DKG+ FVR+ST A AI N
Sbjct: 205 YCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVN 262
Query: 312 ARILCGKPIKCSWGSKPTPP 331
+ +P+KC+WG + P
Sbjct: 263 NTEINQQPVKCAWGKESGDP 282
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L++ F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 98 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 157
Query: 106 NGRHIFGQPIKVNWA---------------------YASSQREDTSGHFNVFVGDLSPEV 144
NG+ + + I+ NWA Y S + + + G LS +
Sbjct: 158 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 217
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
+ L FS + T + RV D +G+ FV F +E A AI +N + + +
Sbjct: 218 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 271
Query: 205 RCNWAAKGATSGDEKQSS 222
+C W G SGD S
Sbjct: 272 KCAW---GKESGDPNHMS 286
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 142/305 (46%), Gaps = 38/305 (12%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S +V++ N+H + N + + FS+ G + C++ ++ + YGFV +
Sbjct: 91 PSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYGFVHFETEE 150
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFA 151
+A AI +NG + + + V S+RE G NV+V + E+ D L
Sbjct: 151 AANEAINKVNGMLLNEKKVFVGKFVPRSERERMMGDKARLFTNVYVKNFGEELDDGKLKE 210
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN-RQIRCNWAA 210
F V+ + ARVM DQ TG+SRGFGFVSF N ++A+ A+ +LN K LGN ++I A
Sbjct: 211 MFEVYGKITSARVMTDQ-TGKSRGFGFVSFENPDNAEQAVKELNDKELGNGKKIYVGRAQ 269
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV--YVGNLSSEVTSVD 268
K A +SD + K + E +Y V YV NL +
Sbjct: 270 KKAER------------------LSDLKRKFEQLKMERMTRYQGVNLYVKNLDDVIDDER 311
Query: 269 LHRHFHALCVGTIEDVRVQ------RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L R F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 312 LRREFAPY--GTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRIIVQKPLYV 369
Query: 323 SWGSK 327
+ +
Sbjct: 370 ALAQR 374
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALA 101
T S+YVG++ P VT ++L E F GP + C+ +I + Y +V++ A A
Sbjct: 9 TMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERA 68
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
+ T+N + +P+++ W SQR+ + SG NVF+ +L ++ + +F FS F
Sbjct: 69 LDTMNFEPLKNRPMRIMW----SQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGN 124
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
RV D++ G SRG+GFV F +E A AIN +NG L +++ + K +
Sbjct: 125 ILSCRVATDEQ-GNSRGYGFVHFETEEAANEAINKVNGMLLNEKKV---FVGKFVPRSER 180
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
++ K+ + +T VYV N E+ L F
Sbjct: 181 ERMMGDKARL-----------------------FTNVYVKNFGEELDDGKLKEMFE--VY 215
Query: 279 GTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILC-GKPIKCSWGSK 327
G I RV D +GFGFV + A A++ N + L GK I K
Sbjct: 216 GKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKELNDKELGNGKKIYVGRAQK 270
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 145/306 (47%), Gaps = 25/306 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---------------DKSSYGFVD 91
R++++G++ P + +++ G KLI+ + Y FV+
Sbjct: 51 SRTLWMGDLEPWWVEENIIQLWQQLGQSVRVKLIRSRHNRSPNPNSSLPPPQNAGYCFVE 110
Query: 92 YFDRRSAALAIVTLNGRHI---FGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTD 146
F+R AL + LNG + G+ ++NWA + + + +++FVGDLSP T+
Sbjct: 111 -FERHEDALQALALNGSIVPRSSGRLFRLNWASGPTLQSQIPPTPQYSLFVGDLSPSTTE 169
Query: 147 ATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
A L A F + + RVM D TG SR FGFV F +ED Q A+++++G WLG R IR
Sbjct: 170 AHLLALFQPNYSSIQSVRVMTDPATGSSRCFGFVRFTEEEDRQRALHEMSGIWLGGRPIR 229
Query: 206 CNWAA-KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEV 264
A +GA + + S+ N+P +TV+VG L++ V
Sbjct: 230 VALATPRGAGHQPVQMQQHLQYAPSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGV 289
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
+ L F G+I +++ R KG GFV++ST EA AI + ++ G ++ SW
Sbjct: 290 SEETLFTLFEPF--GSISSIKIPRGKGCGFVKFSTREEAENAISGMHGFLIGGSRVRLSW 347
Query: 325 GSKPTP 330
G P
Sbjct: 348 GRSSLP 353
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 152/314 (48%), Gaps = 31/314 (9%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK 84
LAAP +L P + ++++VG++H + L F TG + K+I+ +
Sbjct: 69 LAAPVPAVVLGSPAPHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQ 128
Query: 85 SS----YGFVDYFDRRSAALAIVTLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNV 135
+ YGFV+++ +A + +G HI QP ++NWA S +R D + ++
Sbjct: 129 TGQSEGYGFVEFYSHAAAERVLEGFSG-HIMPNTDQPFRLNWASFSMGDRRSDVASDHSI 187
Query: 136 FVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
FVGDL+ +V DATL FS + + A+V+ D TGRS+G+GFV F + + A+ ++
Sbjct: 188 FVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEM 247
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG + +R +R A + S S ++ DG + +N TT
Sbjct: 248 NGVYCSSRPMRIGPAT--------PRKSSGTSGSNGSSARPDGGDLTN----------TT 289
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
V+VG L +V+ DL + F G I V++ K GFV+++ A A+Q N
Sbjct: 290 VFVGGLDPDVSEEDLRQAFSQY--GEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGST 347
Query: 315 LCGKPIKCSWGSKP 328
+ + ++ SWG P
Sbjct: 348 IGKQAVRLSWGRNP 361
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 150/296 (50%), Gaps = 25/296 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R++++G++ + L F+ G + K+I+ ++ YGF+++ +A +
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 104 TLNGRHI--FGQPIKVNW-AYASSQREDTSG-------HFNVFVGDLSPEVTDATLFACF 153
+ NG + QP ++NW A+++ ++ G ++FVGDL+ +VTD L F
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSTGEKRADVGAAAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 154 SV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
S +P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
S ++ SS +NG + +++ D TTV+VG L S+VT +L +
Sbjct: 259 KPSAMQQYSSQGG---HASNGAATQTSQTDSDLSN-----TTVFVGGLDSDVTDEELRQS 310
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
F G + V++ KG GFV++S A AI+ N ++ + ++ SWG P
Sbjct: 311 FSQF--GNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGTQTVRLSWGRNP 364
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/299 (31%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V+V N+ + N L + FSS G + CK+I D S YGFV + R S
Sbjct: 190 PSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFGNILSCKVITDDNGSKGYGFVHFEHRES 249
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + I V + RE G NV++ + ++ + L
Sbjct: 250 AERAIQKMNGILLNDLKIFVGHFKSRKDRESELGAQTREFTNVYIKNFGEDMDEDRLSKI 309
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D GRS+GFGFV+F+ EDAQ+AI+++NGK L RQI A K
Sbjct: 310 FEKFGPTLSVKVMRDD-CGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQKK 368
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L K N Q +Y+ NL ++ +L +
Sbjct: 369 L----ERQTQLQRHFEQL---------KQNRIV---RYQGVNLYIKNLDDDIDDENLRKE 412
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F + GTI +V R KGFGFV +S EA A+ N R++ KP+ + +
Sbjct: 413 FSSF--GTITSAKVMMNNGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQR 469
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 133/295 (45%), Gaps = 46/295 (15%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAAL 100
ST S+YVG++H +VT A+L E FS GP+ ++ + + Y +V++ A
Sbjct: 107 STMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHLADAER 166
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFP 157
+ +N I G+P+++ W SQR+ + SG NVFV +L + + +L+ FS F
Sbjct: 167 VMTDMNLYIIKGKPVRLMW----SQRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFSSFG 222
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+V+ D S+G+GFV F ++E A+ AI +NG L + +I G
Sbjct: 223 NILSCKVITDDNG--SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFV---------GH 271
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
K D +S + ++T VY+ N ++ L + F
Sbjct: 272 FKSRKDRES-----------------ELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKF- 313
Query: 278 VGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G V+V RD KGFGFV + H +A AI N + L G+ I K
Sbjct: 314 -GPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDNMNGKELNGRQIYAGRAQK 367
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 248 NNPQYT--TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYST 299
N+P T ++YVG+L EVT L+ F G I +RV RD G+ +V +
Sbjct: 103 NSPNSTMASLYVGDLHHEVTEAMLYEKFSP--AGPILSIRVCRDAVTHRSLGYAYVNFQH 160
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A + N I+ GKP++ W +
Sbjct: 161 LADAERVMTDMNLYIIKGKPVRLMWSQR 188
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FSS G + K++ + S +GFV + A A+ +N
Sbjct: 394 NLYIKNLDDDIDDENLRKEFSSFGTITSAKVMMNNGRSKGFGFVCFSAPEEATTAVTEMN 453
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 454 GRLVASKPLYVALAQRKEERK 474
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 24/291 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
RS+++G++ P + L FS TG + K+I+ ++ YGF++ R +A +
Sbjct: 90 RSLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQ 149
Query: 104 TLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
T NG + Q ++NWA A +R D + + +FVGDL+ +VTD L F +P+
Sbjct: 150 TYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPS 209
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ TGRS+G+GFV F ++ + A+N++NG + R +R AA G +
Sbjct: 210 VKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGGQ 269
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
+ S + G SD P TT++VG L S VT L + F
Sbjct: 270 QFQKASFQNTQGNQGESD-------------PNNTTIFVGGLDSNVTDDYLRQVFSQY-- 314
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+ N L + I+ SWG P+
Sbjct: 315 GELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPS 365
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 36/206 (17%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
++++GDL P + + L+ CFS +V+ +++TG+ G+GF+ + A+ +
Sbjct: 91 SLWIGDLQPWMEENYLWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQT 150
Query: 194 LNGKWLGNRQ--IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
NG + N + R NWA GA E+ +D P+
Sbjct: 151 YNGTLMPNSEQNFRLNWATLGAG------------------------ERRADDTPD---- 182
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHA-----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
T++VG+L+S+VT L F + D R KG+GFVR+ E A
Sbjct: 183 -YTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRA 241
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPG 332
+ N +P++ + P G
Sbjct: 242 MNEMNGMFCSTRPMRIGPAATKKPVG 267
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + VT+ L++VFS G L K+ + GFV + +R A A+ LNG
Sbjct: 292 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC--GFVQFANRACAEQALAGLNGT 349
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ Q I+++W + S ++
Sbjct: 350 QLGAQSIRLSWGRSPSNKQ 368
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 108/200 (54%), Gaps = 12/200 (6%)
Query: 132 HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
F++FVGDLS E+ L F+ F SD RV+ D +T +S+G+GFVSF + +A++AI
Sbjct: 96 QFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAI 155
Query: 192 NDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
+NG+WLG+R IR NWA + + ++ + E+ N+ +P N
Sbjct: 156 TAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEV----------YNQSSPTNCTV 205
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
Y G LS + L + F GTI+++RV +DKG+ FVR+ST A AI N
Sbjct: 206 YCGGINGALSGFLNEEILQKTFSPY--GTIQEIRVFKDKGYAFVRFSTKEAATHAIVAVN 263
Query: 312 ARILCGKPIKCSWGSKPTPP 331
+ +P+KC+WG + P
Sbjct: 264 NTEINQQPVKCAWGKESGDP 283
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 34/198 (17%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
++VG++ ++ L++ F+ G + C++++ ++ YGFV + + A AI +
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 106 NGRHIFGQPIKVNWA---------------------YASSQREDTSGHFNVFVGDLSPEV 144
NG+ + + I+ NWA Y S + + + G LS +
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
+ L FS + T + RV D +G+ FV F +E A AI +N + + +
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAIVAVNNTEINQQPV 272
Query: 205 RCNWAAKGATSGDEKQSS 222
+C W G SGD S
Sbjct: 273 KCAW---GKESGDPNHMS 287
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 152/314 (48%), Gaps = 31/314 (9%)
Query: 25 LAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK 84
LAAP +L P + ++++VG++H + L F TG + K+I+ +
Sbjct: 69 LAAPVPAVVLGSPAPHQAGQEENKTIWVGDLHFWMDENYLHNCFGYTGEVVAIKVIRNKQ 128
Query: 85 SS----YGFVDYFDRRSAALAIVTLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNV 135
+ YGFV+++ +A + +G HI QP ++NWA S +R D + ++
Sbjct: 129 TGQSEGYGFVEFYSHAAAERVLEGFSG-HIMPNTDQPFRLNWASFSMGDRRSDVASDHSI 187
Query: 136 FVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
FVGDL+ +V DATL FS + + A+V+ D TGRS+G+GFV F + + A+ ++
Sbjct: 188 FVGDLASDVNDATLLEVFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEM 247
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
NG + +R +R A + S S ++ DG + +N TT
Sbjct: 248 NGVYCSSRPMRIGPAT--------PRKSSGTSGSNGSSARPDGGDLTN----------TT 289
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
V+VG L +V+ DL + F G I V++ K GFV+++ A A+Q N
Sbjct: 290 VFVGGLDPDVSEEDLRQAFSQY--GEISSVKIPVGKQCGFVQFAQRKNAEDALQGLNGST 347
Query: 315 LCGKPIKCSWGSKP 328
+ + ++ SWG P
Sbjct: 348 IGKQAVRLSWGRNP 361
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 152/298 (51%), Gaps = 24/298 (8%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R++++G++ + L F+ G + K+I+ ++ YGF+++ +A +
Sbjct: 79 RTIWIGDLQQWMDEGYLHTCFAQAGEVISVKVIRNKQTGQSERYGFIEFNTHEAAEKVLQ 138
Query: 104 TLNGRHI--FGQPIKVNW-AYASSQREDTSG-------HFNVFVGDLSPEVTDATLFACF 153
+ NG + QP ++NW A++S ++ G ++FVGDL+ +VTD L F
Sbjct: 139 SYNGTMMPNAEQPFRLNWSAFSSGEKRADVGAGAGSGSDLSIFVGDLASDVTDTMLRDTF 198
Query: 154 SV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
S +P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG + +R +R A
Sbjct: 199 SSRYPSVKGAKVVIDSNTGRSKGYGFVRFDDESERSRAMTEMNGIYCSSRAMRIGVATPK 258
Query: 213 ATSGDEKQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
S Q ++V+ S+G + S D+ +N TTV+VG L SEVT +L
Sbjct: 259 KPS--PMQQYFPQAVILAGGHASNGAATQTSQTDSDLSN---TTVFVGGLDSEVTDEELR 313
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
+ F G + V++ KG GFV++S A AI+ N ++ + ++ SWG P
Sbjct: 314 QSFSQF--GNVVSVKIPAGKGCGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWGRNP 369
>gi|223948225|gb|ACN28196.1| unknown [Zea mays]
gi|414590425|tpg|DAA40996.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 503
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 24/290 (8%)
Query: 47 CRSVYVGNIHPQV-TNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
R++++G++ + N L F+ + K+I+ ++ YGF++++ + +A
Sbjct: 145 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 204
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
++ NG+ + K+NWA AS+ +R D +FVGDL+P+VTD+ L F
Sbjct: 205 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 264
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A+V+ D+ TGR +G+GFV F + + A+ ++NG L R++R AA
Sbjct: 265 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAAS---- 320
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
K+++D++ TNG + S + EN+P TTV+VG L S V L + F
Sbjct: 321 ---KKNTDAQQTY-ATNG---AYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIF-- 371
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ K GFV++++ A AIQM N + G+ + SWG
Sbjct: 372 TPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWG 421
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + V L+++F+ G + K+ GFV + R A AI LNG
Sbjct: 352 TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAIQMLNGS 409
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ +++W ++ R+
Sbjct: 410 QIGGQKARLSWGRSTQNRQ 428
>gi|212276053|ref|NP_001130512.1| uncharacterized protein LOC100191611 [Zea mays]
gi|194689348|gb|ACF78758.1| unknown [Zea mays]
gi|414590424|tpg|DAA40995.1| TPA: hypothetical protein ZEAMMB73_114709 [Zea mays]
Length = 472
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 151/290 (52%), Gaps = 24/290 (8%)
Query: 47 CRSVYVGNIHPQV-TNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
R++++G++ + N L F+ + K+I+ ++ YGF++++ + +A
Sbjct: 114 VRTLWIGDLQYWMDENYLHYNAFAPVAQQIASVKIIRNKQTGHSEGYGFIEFYSQAAAEH 173
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
++ NG+ + K+NWA AS+ +R D +FVGDL+P+VTD+ L F
Sbjct: 174 TLMNFNGQMMPNIEMAFKLNWASASTGDKRGDNGSDHAIFVGDLAPDVTDSMLEDVFRAN 233
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A+V+ D+ TGR +G+GFV F + + A+ ++NG L R++R AA
Sbjct: 234 YPSVRGAKVVVDRITGRPKGYGFVHFGDLNEQARAMTEMNGMMLSTRKMRIGAAAS---- 289
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
K+++D++ TNG + S + EN+P TTV+VG L S V L + F
Sbjct: 290 ---KKNTDAQQTY-ATNG---AYQSSQGNCSENDPNNTTVFVGGLDSNVDEEYLRQIF-- 340
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ K GFV++++ A AIQM N + G+ + SWG
Sbjct: 341 TPYGEISYVKIPVGKHCGFVQFTSRSCAEEAIQMLNGSQIGGQKARLSWG 390
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + V L+++F+ G + K+ GFV + R A AI LNG
Sbjct: 321 TVFVGGLDSNVDEEYLRQIFTPYGEISYVKIPVGKHC--GFVQFTSRSCAEEAIQMLNGS 378
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ +++W ++ R+
Sbjct: 379 QIGGQKARLSWGRSTQNRQ 397
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQVT LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+FVG+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFVGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG SRGFGFVS+ + E + +AI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MIKLYGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VGNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FVGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC + I S+ K
Sbjct: 174 MNGQYLCNRQITVSYAYK 191
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T YVGNL +VT L F + G + +V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
AI++ N L GKPI+ + S+
Sbjct: 81 YAIKVLNMIKLYGKPIRVNKASQ 103
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 143/281 (50%), Gaps = 34/281 (12%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAA 99
+ C+++++G+I A + +FSS KLI+ DK + YGF+++ ++ A
Sbjct: 3 TECKTLWMGDIQMHWDEAFITSLFSSAAEQPVVKLIR-DKVTGYPAGYGFLEFPTQQGAQ 61
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-F 156
+ TLNG+ I ++NW A +R +TS ++FVGDL+P+VTD L A F+ F
Sbjct: 62 QVLETLNGQLIPNTMHRFRMNWG-AGGRRIETSDDHSIFVGDLAPDVTDELLLATFNARF 120
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
T A+V+ D T S+GFGFV F ++E+A A+ +NG + +R +R + A
Sbjct: 121 TTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVAT------ 174
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+ + S+ V T G +G TTV+VG L T +L F AL
Sbjct: 175 ---ERNKSRQQVGFTMGEEEGTN-------------TTVFVGGLDPATTEDELRARFGAL 218
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG 317
G I V+V +G GFV+YS+ A +AI N + + G
Sbjct: 219 --GAIVSVKVPPGRGCGFVQYSSKEAAEVAISQMNGQAVSG 257
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 35/205 (17%)
Query: 22 PSLLAAPQIEPILSGNLPP---------------RFDASTCRSVYVGNIHPQVTNALLQE 66
P+ A Q+ L+G L P R + S S++VG++ P VT+ LL
Sbjct: 55 PTQQGAQQVLETLNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVTDELLLA 114
Query: 67 VFSST-GPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAY 121
F++ + G K+ + + +GFV + + A A+ T+NG + +P++V+ A
Sbjct: 115 TFNARFTTVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVAT 174
Query: 122 ASSQR---------EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR 172
++ E+ + VFVG L P T+ L A F +V
Sbjct: 175 ERNKSRQQVGFTMGEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVP------P 228
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGK 197
RG GFV + ++E A+ AI+ +NG+
Sbjct: 229 GRGCGFVQYSSKEAAEVAISQMNGQ 253
>gi|164656166|ref|XP_001729211.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
gi|159103101|gb|EDP41997.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
Length = 328
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 51/310 (16%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK------KDKSSYGFVDYFDRRSAALAIV 103
+ V NI T L+ +F GP+ G +++ + K +Y ++ Y + SA +AI
Sbjct: 25 LLVRNISVHATERDLRVLFEQAGPIGGMEMMPPVLVQGQPKPTYAWIQYMRQASADMAIT 84
Query: 104 TLNGRHIFGQPIKVNWAYAS--------------------------SQREDTSGHFNVFV 137
L G + G P+ + WA + + T+ ++VFV
Sbjct: 85 YLQGFMLAGLPLFLEWAGSQDVGTQPIAMPVPVVMPSITPEARNMQALHTPTTCLYSVFV 144
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
GDL PE+ D L FS FP+ DARV+ D + G SRG+GFV RN+ +A AI +++G+
Sbjct: 145 GDLDPEIDDTILAQTFSGFPSMYDARVIRDLRNGHSRGYGFVRLRNEREAMEAIANMSGQ 204
Query: 198 WLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYV 257
W+G+R IR NWA + + E S+++ E ++D S T+YV
Sbjct: 205 WVGSRIIRVNWAVRPS----EPFPSETQRPAEPEPKVADSSSDSK-----------TLYV 249
Query: 258 GNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFV--RYSTHPEAALAIQMGNARIL 315
GNL D+ F + G + + ++ + + FV ++S+ A N +
Sbjct: 250 GNLPDNANLPDIMNIFSSF--GNVINAQMFPGRHYAFVTFQFSSDANKAWDASQSNPPNM 307
Query: 316 CGKPIKCSWG 325
G+ +K W
Sbjct: 308 AGQTLKVGWA 317
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 29/188 (15%)
Query: 45 STC-RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAA 99
+TC SV+VG++ P++ + +L + FS + ++I+ ++ YGFV + R A
Sbjct: 136 TTCLYSVFVGDLDPEIDDTILAQTFSGFPSMYDARVIRDLRNGHSRGYGFVRLRNEREAM 195
Query: 100 LAIVTLNGRHIFGQPIKVNWAY-------ASSQR---------EDTSGHFNVFVGDLSPE 143
AI ++G+ + + I+VNWA + +QR + +S ++VG+L
Sbjct: 196 EAIANMSGQWVGSRIIRVNWAVRPSEPFPSETQRPAEPEPKVADSSSDSKTLYVGNLPDN 255
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIN--DLNGKWLGN 201
+ FS F +A++ R + FV+F+ DA A + N +
Sbjct: 256 ANLPDIMNIFSSFGNVINAQMF------PGRHYAFVTFQFSSDANKAWDASQSNPPNMAG 309
Query: 202 RQIRCNWA 209
+ ++ WA
Sbjct: 310 QTLKVGWA 317
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAI 307
+V+VG+L E+ L + F ++ D RV RD +G+GFVR EA AI
Sbjct: 141 SVFVGDLDPEIDDTILAQTFSGFP--SMYDARVIRDLRNGHSRGYGFVRLRNEREAMEAI 198
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHL 346
+ + + + I+ +W +P+ P S T P P P +
Sbjct: 199 ANMSGQWVGSRIIRVNWAVRPSEPFPSETQRPAEPEPKV 237
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 143/274 (52%), Gaps = 21/274 (7%)
Query: 64 LQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKV 117
L F++TG L K+I+ ++ YGFV++F +A + G + QP ++
Sbjct: 6 LHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRL 65
Query: 118 NWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPTCSDARVMWDQKTGRSR 174
NWA S +R D ++FVGDL+ +V+D+ L F+ +P+ A+V++D TGRS+
Sbjct: 66 NWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSK 125
Query: 175 GFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGI 234
G+GFV F ++ + A+ ++NG + +R +R A +SG ++Q S +NG
Sbjct: 126 GYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYA--SNGA 183
Query: 235 SDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGF 294
S +S+ D+ TT++VG L V+ DL + F G I V++ KG GF
Sbjct: 184 S---VQSDGDSMN-----TTIFVGGLDPNVSDEDLRQPFSQY--GEIVSVKIPVGKGCGF 233
Query: 295 VRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
V+++ A A+Q N ++ + ++ SWG P
Sbjct: 234 VQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNP 267
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V+++LL E F+ P ++ K++ + YGFV + D
Sbjct: 76 RSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDE 135
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------YASS----QREDTSGHFN 134
+ A+ +NG + +P+++ A YAS+ Q + S +
Sbjct: 136 NERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTT 195
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG L P V+D L FS + ++ +G GFV F N+ +A+ A+ L
Sbjct: 196 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKL 249
Query: 195 NGKWLGNRQIRCNWA 209
NG +G + +R +W
Sbjct: 250 NGTVIGKQTVRLSWG 264
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 39/321 (12%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
++P A P +P+ + R++++G++ + L F+ TG + K+
Sbjct: 45 WNPQAAAPPSAQPMTVDEI---------RTLWIGDLQYWMDENFLYGCFAHTGEMVSAKV 95
Query: 80 IKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASS-QREDTSG 131
I+ ++ YGF+++ +A + T N I P ++NWA SS + D S
Sbjct: 96 IRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDSP 155
Query: 132 HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
+ +FVGDL+ +VTD L F + +P+ A+V+ D+ TGR++G+GFV F ++ + A
Sbjct: 156 DYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRATGRTKGYGFVRFSDESEQIRA 215
Query: 191 INDLNGKWLGNRQIRCNWAA--KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN 248
+ ++NG R +R AA KG T + S + V +N
Sbjct: 216 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSAAGGVPT-----------------DN 258
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+P TTV+VG L VT L F G I V++ K GFV++S A A++
Sbjct: 259 DPNNTTVFVGGLDQSVTDDHLKNVFGQY--GEIVHVKIPAGKRCGFVQFSEKSCAEEALR 316
Query: 309 MGNARILCGKPIKCSWGSKPT 329
M N L G ++ SWG P+
Sbjct: 317 MLNGVQLGGTTVRLSWGRSPS 337
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 35 SGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFD 94
+G +P D + +V+VG + VT+ L+ VF G + K+ + GFV + +
Sbjct: 251 AGGVPTDNDPNNT-TVFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRC--GFVQFSE 307
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE 127
+ A A+ LNG + G ++++W + S ++
Sbjct: 308 KSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 340
>gi|356544204|ref|XP_003540544.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 364
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQ+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQICEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGF+S+ + E + SAI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 99/227 (43%), Gaps = 51/227 (22%)
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
G ++ GQ +A+ + +D + +VG+L P++ + L+ F + V
Sbjct: 10 GANLLGQ-------HAAERNQDATA----YVGNLDPQICEELLWELFVQAGPVVNVYVPK 58
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D+ T + +G+GFV FR++EDA AI LN L + IR N K S D KS
Sbjct: 59 DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN-----------KASQDKKS 107
Query: 227 VVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
+ N +++GNL +V L+ F A V + + ++
Sbjct: 108 LDVGAN----------------------LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKI 144
Query: 287 QRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RD +GFGF+ Y + + AI+ N + LC + I S+ K
Sbjct: 145 MRDPETGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYK 191
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 146/308 (47%), Gaps = 25/308 (8%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDY 92
N P + + RS+++G++ + L F TG L K+I+ ++ YGF+++
Sbjct: 73 NPSPTGNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEF 132
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATL 149
+A + T NG + Q ++NWA + +R D S +FVGDL+ +VTD L
Sbjct: 133 RSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSAEHTIFVGDLAADVTDYIL 192
Query: 150 FACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
F SV+ + A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG R +R
Sbjct: 193 QETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGP 252
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
AA G ++++ + T G SD P TT++VG L V
Sbjct: 253 AANKKPVGTPQKATYQNP--QATQGESD-------------PNNTTIFVGGLDPTVAEEH 297
Query: 269 LHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
L + F G + V++ K GFV++ T A A+ N L G+ I+ SWG P
Sbjct: 298 LRQVFSPY--GELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSP 355
Query: 329 TPPGTSST 336
+ T T
Sbjct: 356 SSKQTDQT 363
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 151/321 (47%), Gaps = 39/321 (12%)
Query: 20 YHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL 79
++P A P ++P A R++++G++ + L F+ TG + K+
Sbjct: 42 WNPQAAAPPSVQPTT---------ADEIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKV 92
Query: 80 IKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASS-QREDTSG 131
I+ ++ YGF+++ +A + T N I P ++ WA SS + D S
Sbjct: 93 IRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLXWASLSSGDKRDDSP 152
Query: 132 HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
+ +FVGDL+ +VTD L F + +P+ A+V+ ++ TGR++G+GFV F ++ + A
Sbjct: 153 DYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVINRVTGRTKGYGFVRFSDESEQIRA 212
Query: 191 INDLNGKWLGNRQIRCNWAA--KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN 248
+ ++NG R +R AA KG T + S + V +N
Sbjct: 213 MTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTT-----------------DN 255
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+P TTV+VG L + VT L F G I V++ K GFV++S A A++
Sbjct: 256 DPNNTTVFVGGLDASVTDDHLKNVFSQY--GEIVHVKIPAGKRCGFVQFSEKSCAEEALR 313
Query: 309 MGNARILCGKPIKCSWGSKPT 329
M N L G ++ SWG P+
Sbjct: 314 MLNGVQLGGTTVRLSWGRSPS 334
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+V+VG + VT+ L+ VFS G + K+ + GFV + ++ A A+ LNG
Sbjct: 261 TVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRC--GFVQFSEKSCAEEALRMLNGV 318
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ G ++++W + S ++
Sbjct: 319 QLGGTTVRLSWGRSPSNKQ 337
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 31/291 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+SV+VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 106 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 165
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+G HI QP ++NWA S +R D + ++FVGDL+ +V DATL FS +
Sbjct: 166 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDAASDHSIFVGDLASDVNDATLLEAFSSRYS 224
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + +R +R A
Sbjct: 225 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPAT------- 277
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ S S + SDG + +N TTV+VG L V+ DL + F
Sbjct: 278 -PRKSSGTSGSNGSAARSDGGDLTN----------TTVFVGGLDPNVSEEDLRQTFSQY- 325
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV+++ A A+Q N + + ++ SWG P
Sbjct: 326 -GEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNP 375
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 24/187 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R DA++ S++VG++ V +A L E FSS ++G K++ + YGFV + D
Sbjct: 192 RSDAASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 251
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YASSQREDTSGHFN--VFVGDLSP 142
A+ +NG + +P+++ A S+ R D N VFVG L P
Sbjct: 252 SEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDP 311
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 312 NVSEEDLRQTFSQYGEISSVKIPIGKQCG------FVQFAQRKNAEDALQGLNGSTIGKQ 365
Query: 203 QIRCNWA 209
+R +W
Sbjct: 366 NVRLSWG 372
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 164/364 (45%), Gaps = 45/364 (12%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++++G + P + ++ ++ + G K+I+ S Y FVD+ +AA A+ TL
Sbjct: 73 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFSSPDAAAKAL-TL 131
Query: 106 NGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
NG+ I +P K+NWA A R++ +++FVGDL PEVT+ L F + +P+
Sbjct: 132 NGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYPS 191
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A++M D +G SRG+GFV F ++ED Q A+ ++ G + GNR +R + A SG
Sbjct: 192 TKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGGP 251
Query: 219 KQSSDSK-------------SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
S+ G + N+ NN TTV+VG LS VT
Sbjct: 252 GGPGGMGMPQQGGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNN---TTVFVGGLSGYVT 308
Query: 266 SVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+L F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 309 EDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 366
Query: 326 SKPTPPGTSSTPLP--------------PPPAPHLPGFSATDLAAYERQIALSKIAGAQA 371
G + TP PP P+ GF + A L + GA +
Sbjct: 367 RSQNNSGPAGTPYRPAPPPPVYGPGMGMPPQHPYGGGFPP--MKAISTDFPLYCLHGASS 424
Query: 372 LMHP 375
+++P
Sbjct: 425 MVYP 428
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQ++ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG SRGFGF+S+ + E + SAI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 51/227 (22%)
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
G ++ GQ +A+ + +D + +VG+L P++++ L+ F + V
Sbjct: 10 GANLLGQ-------HAAERNQDATA----YVGNLDPQISEELLWELFVQAGPVVNVYVPK 58
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D+ T + +G+GFV FR++EDA AI LN L + IR N K S D KS
Sbjct: 59 DRVTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN-----------KASQDKKS 107
Query: 227 VVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
+ N +++GNL +V L+ F A V + + ++
Sbjct: 108 LDVGAN----------------------LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKI 144
Query: 287 QRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RD +GFGF+ Y + + AI+ N + LC + I S+ K
Sbjct: 145 MRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYK 191
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 144/291 (49%), Gaps = 31/291 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+SV+VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 103 KSVWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 162
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+G HI QP ++NWA S +R D++ ++FVGDL+ +V DATL FS +
Sbjct: 163 GFSG-HIMPNTDQPFRLNWASFSMGDRRSDSASDHSIFVGDLASDVNDATLLEAFSSRYS 221
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + +R +R A
Sbjct: 222 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTQAMTEMNGVYCSSRPMRIGPAT------- 274
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ S S + SDG + +N TTV+VG L V+ DL + F
Sbjct: 275 -PRKSSGTSGSNGSAARSDGGDLTN----------TTVFVGGLDPNVSEEDLRQTFSQY- 322
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV+++ A A+Q N + + ++ SWG P
Sbjct: 323 -GEISSVKIPIGKQCGFVQFAQRKNAEDALQGLNGSTIGKQNVRLSWGRNP 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 24/187 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D+++ S++VG++ V +A L E FSS ++G K++ + YGFV + D
Sbjct: 189 RSDSASDHSIFVGDLASDVNDATLLEAFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 248
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YASSQREDTSGHFN--VFVGDLSP 142
A+ +NG + +P+++ A S+ R D N VFVG L P
Sbjct: 249 SEKTQAMTEMNGVYCSSRPMRIGPATPRKSSGTSGSNGSAARSDGGDLTNTTVFVGGLDP 308
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 309 NVSEEDLRQTFSQYGEISSVKIPIGKQCG------FVQFAQRKNAEDALQGLNGSTIGKQ 362
Query: 203 QIRCNWA 209
+R +W
Sbjct: 363 NVRLSWG 369
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 147/300 (49%), Gaps = 33/300 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGFVDYFDRR 96
P F S ++++ N+ + N L + F++ G + CK+ + + YGFV Y
Sbjct: 115 PAFRKSGVGNIFIKNLDKDIDNKALHDTFTAFGTILSCKVATDLAGNSKGYGFVHYEKEE 174
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQRE-DTSGHF-NVFVGDLSPEVTDATLFACFS 154
+A LAI +NG + G+ + V ++R D H+ NVFV +LS +TD + F+
Sbjct: 175 AAQLAIEKVNGMLLEGKKVFVGPFLKRTERPVDKEQHYTNVFVKNLSENLTDEEVEKMFN 234
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
+ +M D+ G+S+GFGF++F + E A +A+ LNGK + +++ C A K A
Sbjct: 235 EHGMVTSFAIMKDE-AGKSKGFGFINFEDAEGAHAAVTALNGKEIDGKELYCGRAQKKA- 292
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY--TTVYVGNLSSEVTSVDLHRH 272
E+++ EL ++K +E E +Y +YV NL EV L
Sbjct: 293 ---EREA-------EL-------KQKFDEVRQERIAKYQGMNLYVKNLVDEVDDDQLRAE 335
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V +D KGFGFV YS+ EA A+ N ++L GKP+ + +
Sbjct: 336 FAPH--GTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMNGKMLLGKPMYVALAQR 393
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDY---FDRRSAALA 101
S+YVG++ VT A L E+FS GP+ ++ + + Y +V+Y D +A A
Sbjct: 25 SLYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSALDAAAAERA 84
Query: 102 IVTLNGRHIF--------GQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
I LN + +P+++ W++ SG N+F+ +L ++ + L F
Sbjct: 85 IEALNYTSVIPGKEGGEDSKPMRIMWSHRDPAFR-KSGVGNIFIKNLDKDIDNKALHDTF 143
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
+ F T +V D G S+G+GFV + +E AQ AI +NG L +++ K
Sbjct: 144 TAFGTILSCKVATDL-AGNSKGYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFVGPFLKRT 202
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
+K+ YT V+V NLS +T ++ + F
Sbjct: 203 ERPVDKEQ-----------------------------HYTNVFVKNLSENLTDEEVEKMF 233
Query: 274 HALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ G + + +D KGFGF+ + A A+ N + + GK + C K
Sbjct: 234 NEH--GMVTSFAIMKDEAGKSKGFGFINFEDAEGAHAAVTALNGKEIDGKELYCGRAQK 290
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 146/302 (48%), Gaps = 27/302 (8%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK---KDKSSYGFVDYFDRRSAA 99
DA T ++++G + P + ++ V+ S G K+I+ + Y FVD+ ++AA
Sbjct: 55 DAKT--TLWMGELEPWIDENFIRSVWYSLGEQVNVKMIRDKFNGSAGYCFVDFTSPQAAA 112
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACF- 153
A+ LNG I +P K+NWA + +R+D +++FVGDL PEV + L + F
Sbjct: 113 KALA-LNGTQIPNSNRPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQ 171
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
F +C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 172 GRFQSCKSAKIMTDPISGMSRGYGFVRFADEMDQQRALTEMQGVYCGNRPMRISTATPKN 231
Query: 214 TSGDEKQSSDSK----------SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSE 263
G++ ++ T G + N+ NN TTV+VG LS
Sbjct: 232 KGGNQGMMQQGMGGMAPQMGMYTMGAPTMGYYGAPQPMNQFTDPNN---TTVFVGGLSGY 288
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
VT +L F G I V++ KG GFV++ A +AI + ++ S
Sbjct: 289 VTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 346
Query: 324 WG 325
WG
Sbjct: 347 WG 348
>gi|255073999|ref|XP_002500674.1| predicted protein [Micromonas sp. RCC299]
gi|226515937|gb|ACO61932.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 144/294 (48%), Gaps = 22/294 (7%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
+ ++++VG++ + + L F+ G + K+I+ ++ YGFV++ DR +A
Sbjct: 8 ETGEVKTLWVGDLGYWMEESYLHTCFAHFGAIGSVKIIRNKQTGFSEGYGFVEFVDRATA 67
Query: 99 ALAIVTLNGRHIFG--QPIKVNWA-----YASSQREDTSGHFNVFVGDLSPEVTDATLFA 151
A+ TLNG + Q ++NWA + + +VFVGDL PEV D L
Sbjct: 68 EHALKTLNGTPMPSAHQNFRLNWASFGVGGGAGGAGGAANDHSVFVGDLPPEVNDYALQE 127
Query: 152 CFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F+ +P+ +ARV+ D TGRS+GFGFV F ++ + A+ ++NG G+R +R + A
Sbjct: 128 TFAERYPSVRNARVVTDPNTGRSKGFGFVRFGDEGERDRALVEMNGVPCGSRVMRISLAI 187
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
K +N APE P+ +TV+VG L +T DL
Sbjct: 188 P------RKGVDGVGGGGVGSNTGVGSNGVGGSPAPE--PENSTVFVGGLDPTLTEPDLR 239
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
HF A G + V++ KG GFV+++ +A +IQ N ++ ++ SW
Sbjct: 240 THFEAF--GELVYVKIPAGKGCGFVQFTRRADAEASIQALNGTMMGASRVRLSW 291
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQVT LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+FVG+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFVGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG SRGFGFVS+ + E + +AI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 95/227 (41%), Gaps = 51/227 (22%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+VT+ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N A+ Q+K + D N +
Sbjct: 88 MIKLYGKPIRVNKAS---------------------------QDKKSLDVGAN------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
+VGNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FVGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEA 173
Query: 310 GNARILCGKPIKCSWGSKPTPPG-----------TSSTPLPPPPAPH 345
N + LC + I S+ K G +S P P PH
Sbjct: 174 MNGQYLCNRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPH 220
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T YVGNL +VT L F + G + +V V +D+ G+GFV + + +A
Sbjct: 23 QDATAYVGNLDPQVTEELLWELF--VQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDAD 80
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
AI++ N L GKPI+ + S+
Sbjct: 81 YAIKVLNMIKLYGKPIRVNKASQ 103
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 29/291 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSST-GPLE--GCKLIKKDKSS----YGFVDYFDRRSAAL 100
++++VG++H + L F+S G ++ K+I+ + YGFV++ A
Sbjct: 108 KTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFDSHDVADK 167
Query: 101 AIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFS- 154
+ NG + QP ++NWA S+ + E+ ++FVGDL+P+V+D L FS
Sbjct: 168 VLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTLLHETFSE 227
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
+P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG +R +R A T
Sbjct: 228 KYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKT 287
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
+G ++Q + NG PE + TT++VG L S VT DL + F
Sbjct: 288 TGYQQQGG------YMPNGAL--------TRPEGDTLNTTIFVGGLDSSVTDDDLRQPFS 333
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ KG GFV++ P A A++ N ++ + ++ SWG
Sbjct: 334 EF--GEIVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWG 382
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
S++VG++ P V++ LL E FS P ++ K++ + YGFV + D A+
Sbjct: 206 SIFVGDLAPDVSDTLLHETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMT 265
Query: 104 TLNGRHIFGQPIKVNWAY-----------------ASSQREDTSGHFNVFVGDLSPEVTD 146
+NG + +++ A A ++ E + + +FVG L VTD
Sbjct: 266 EMNGVKCSSRAMRIGPATPRKTTGYQQQGGYMPNGALTRPEGDTLNTTIFVGGLDSSVTD 325
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L FS F ++ +G GFV F N+ A+ A+ LNG +G + +R
Sbjct: 326 DDLRQPFSEFGEIVSVKI------PVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRL 379
Query: 207 NWAAKGA 213
+W A
Sbjct: 380 SWGRNQA 386
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIVTLNG 107
+++VG + VT+ L++ FS G + K+ + K GFV + +R SA A+ LNG
Sbjct: 313 TIFVGGLDSSVTDDDLRQPFSEFGEIVSVKIPVGK---GCGFVQFVNRPSAEEALEKLNG 369
Query: 108 RHIFGQPIKVNWAYASSQREDTSGHFNVFV 137
I Q ++++W + ++ + N +V
Sbjct: 370 TVIGKQTVRLSWGRNQANKQPRDKYGNQWV 399
>gi|393907830|gb|EFO21360.2| hypothetical protein LOAG_07126 [Loa loa]
Length = 317
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 17/201 (8%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
S + +T+ +F+VFVGDL+ EV TL A F F S+A+V+ D +T +S+ +GFVSF
Sbjct: 122 SPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAV 181
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+E+A+ AI +NG+ +G R IR NWA + G+E + I + +N
Sbjct: 182 KENAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTY-----DNIFNATHATN- 235
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
T+VYVG +S T +L + F A + T+ +VR+ + +G+ FVRY T A
Sbjct: 236 ---------TSVYVGGISPATTDEELMQPFSA--IATVTEVRLFKQQGYAFVRYLTKDAA 284
Query: 304 ALAIQMGNARILCGKPIKCSW 324
AI + + + G+ IKCSW
Sbjct: 285 TRAIMFMHGKEINGQKIKCSW 305
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 26/190 (13%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ + + V+VG++ +V + L+ F S G + K+I+ ++ SYGFV + +
Sbjct: 123 PKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVK 182
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----------------YASSQREDTSGHFNVFVGD 139
+A AI +NG+ I +PI+ NWA Y + + + +V+VG
Sbjct: 183 ENAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGG 242
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+SP TD L FS T ++ R+ Q G+ FV + ++ A AI ++GK +
Sbjct: 243 ISPATTDEELMQPFSAIATVTEVRLFKQQ------GYAFVRYLTKDAATRAIMFMHGKEI 296
Query: 200 GNRQIRCNWA 209
++I+C+W+
Sbjct: 297 NGQKIKCSWS 306
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+L++EV S L F + G I + +V RD K +GFV ++ A AI+
Sbjct: 133 VFVGDLATEVDSCTLKAAFESF--GEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIE 190
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAG 368
N +++ +PI+ +W + G PP AT+ + Y I S
Sbjct: 191 KMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGI--SPATT 248
Query: 369 AQALMHP 375
+ LM P
Sbjct: 249 DEELMQP 255
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQ++ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNV-YVPKDRVTNQHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG SRGFGF+S+ + E + SAI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P++++ L+ F + V D+ T + +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKVLN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MIKLYGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V L+ F A V + + ++ RD +GFGF+ Y + + AI+
Sbjct: 115 FIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC + I S+ K
Sbjct: 174 MNGQYLCNRQITVSYAYK 191
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 150/307 (48%), Gaps = 34/307 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++G + P + ++ VF++ TG K+I+ DKSS Y FV+ F+ AA +
Sbjct: 52 TLWMGELEPWMDENFIKGVFATATGEQVNVKVIR-DKSSGNAGYCFVE-FNSTDAASKAL 109
Query: 104 TLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
LNG + + K+NWA + +R+D F++FVGDL PEV + L + F FP
Sbjct: 110 ALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFP 169
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC--------NWA 209
+C A++M D TG+SRG+GFV F +++D Q A+ ++ G + GNR +R N
Sbjct: 170 SCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 229
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDGQE--KSNEDAP---------ENNPQYTTVYVG 258
GA G + + + G+ G + + AP +P TTV+VG
Sbjct: 230 PYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVG 289
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 290 GLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 347
Query: 319 PIKCSWG 325
++ SWG
Sbjct: 348 RVRLSWG 354
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 140/296 (47%), Gaps = 22/296 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA ++
Sbjct: 63 TLWMGELEPWIDENFIRNIWYQMGEQVNVKMIRDKFSGSNAGYCFVD-FATPAAAAKALS 121
Query: 105 LNGRHI--FGQPIKVNWAYASS----QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
+NG + +P K+NWA RED + +++FVGDL PEV + L + F S FP
Sbjct: 122 VNGTPMPNTNRPFKLNWATGGGLSDRNREDRTPEYSIFVGDLGPEVNEYVLVSLFQSRFP 181
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA---KGAT 214
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A KG
Sbjct: 182 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPA 241
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDL 269
G + + G P+ +P TTV+VG LS VT +L
Sbjct: 242 GGPGQMGMPGAPPAGMYPPAMGGPPMGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 301
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 302 RSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 355
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 19 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 78
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G HI QP ++NWA S +R D + ++FVGDL+ +V D TL FS +
Sbjct: 79 GFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYS 137
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R A TSG
Sbjct: 138 SVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGT 197
Query: 218 EKQS-SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+ S ++S +LTN TTV+VG L V+ DL + F
Sbjct: 198 SGPTGSAARSDGDLTN--------------------TTVFVGGLDPNVSEDDLRQTFSQY 237
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++ A A+Q N + + ++ SWG P
Sbjct: 238 --GEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNP 287
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D ++ S++VG++ V + L E FS ++G K++ + YGFV + D
Sbjct: 105 RSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 164
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY-----------ASSQREDTS-GHFNVFVGDLSPE 143
A+ +NG + +P+++ A S+ R D + VFVG L P
Sbjct: 165 NEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPN 224
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 225 VSEDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQT 278
Query: 204 IRCNWAAKGATSGDEKQSSDSKSVVELTNGI 234
+R +W G +++ SD+ S + NG+
Sbjct: 279 VRLSW---GRNPANKQLRSDNGS--QWNNGM 304
>gi|312080690|ref|XP_003142708.1| hypothetical protein LOAG_07126 [Loa loa]
Length = 366
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 112/206 (54%), Gaps = 17/206 (8%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
S + +T+ +F+VFVGDL+ EV TL A F F S+A+V+ D +T +S+ +GFVSF
Sbjct: 122 SPKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAV 181
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
+E+A+ AI +NG+ +G R IR NWA + G+E + I + +N
Sbjct: 182 KENAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTY-----DNIFNATHATN- 235
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
T+VYVG +S T +L + F A + T+ +VR+ + +G+ FVRY T A
Sbjct: 236 ---------TSVYVGGISPATTDEELMQPFSA--IATVTEVRLFKQQGYAFVRYLTKDAA 284
Query: 304 ALAIQMGNARILCGKPIKCSWGSKPT 329
AI + + + G+ IKCSW T
Sbjct: 285 TRAIMFMHGKEINGQKIKCSWSRTVT 310
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDR 95
P+ + + V+VG++ +V + L+ F S G + K+I+ ++ SYGFV + +
Sbjct: 123 PKVNTNKNFHVFVGDLATEVDSCTLKAAFESFGEISEAKVIRDPQTLKSKSYGFVSFAVK 182
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----------------YASSQREDTSGHFNVFVGD 139
+A AI +NG+ I +PI+ NWA Y + + + +V+VG
Sbjct: 183 ENAEKAIEKMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGG 242
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+SP TD L FS T ++ R+ Q G+ FV + ++ A AI ++GK +
Sbjct: 243 ISPATTDEELMQPFSAIATVTEVRLFKQQ------GYAFVRYLTKDAATRAIMFMHGKEI 296
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGI 234
++I+C+W+ + + + +V LTN I
Sbjct: 297 NGQKIKCSWSRTVTENKINISNQTASNVNLLTNSI 331
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VG+L++EV S L F + G I + +V RD K +GFV ++ A AI+
Sbjct: 133 VFVGDLATEVDSCTLKAAFESF--GEISEAKVIRDPQTLKSKSYGFVSFAVKENAEKAIE 190
Query: 309 MGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIALSKIAG 368
N +++ +PI+ +W + G PP AT+ + Y I S
Sbjct: 191 KMNGQMIGRRPIRTNWAVRRFDGGEEYAMKPPTYDNIFNATHATNTSVYVGGI--SPATT 248
Query: 369 AQALMHP 375
+ LM P
Sbjct: 249 DEELMQP 255
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 41/315 (13%)
Query: 23 SLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL--- 79
+L APQ P + + + + ST S+YVG + P V+ ALL ++FS G + ++
Sbjct: 16 NLQEAPQTAPTSTDSDSQKVETSTA-SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRD 74
Query: 80 -IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFV 137
I K Y +V++ D + AI LN I GQP ++ W+ S R+ SG N+F+
Sbjct: 75 AITKTSLGYAYVNFNDYEAGRQAIEKLNYTPIKGQPCRIMWSQRDPSLRKKGSG--NIFI 132
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
+L ++ + L FSVF ++ D+ TG S+GFGFV F + E A+ AI+ +NG
Sbjct: 133 KNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGM 192
Query: 198 WLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYV 257
L +++ + A + D ++ E+A N +T VY+
Sbjct: 193 LLNGQEV---YVAPHVSRKD--------------------RQSKLEEAKAN---FTNVYI 226
Query: 258 GNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNA 312
N+S E + F V + V +++D +GFGFV Y TH AA A++ N
Sbjct: 227 KNISLETPEQEFEEFFKK--VAPVTSVHLEKDSEGKLRGFGFVNYETHAGAAKAVEELNG 284
Query: 313 RILCGKPIKCSWGSK 327
G+ + K
Sbjct: 285 VEFHGQQLHVGRAQK 299
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 33/293 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
++++ N+H + N L + FS G + CK+ + + +GFV + +A AI
Sbjct: 129 NIFIKNLHADIDNKALHDTFSVFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDA 188
Query: 105 LNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTC 159
+NG + GQ + V + R E+ +F NV++ ++S E + F
Sbjct: 189 INGMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKKVAPV 248
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
+ + D + G+ RGFGFV++ A A+ +LNG +Q+ A K E
Sbjct: 249 TSVHLEKDSE-GKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQQEL 307
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ +S +E Q +++ NL + L F G
Sbjct: 308 RRQYEQSKLEKMEKY----------------QGVNLFIKNLDDSIDDERLREEFSPF--G 349
Query: 280 TIEDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
TI V+V + KGFGFV +ST EA AI N +I+ GKP+ + +
Sbjct: 350 TITSVKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQR 402
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 148/293 (50%), Gaps = 24/293 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + L F+ TG + K+I+ ++S YGF+++ R A +
Sbjct: 65 VRTLWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERIL 124
Query: 103 VTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-F 156
T NG + GQ ++NWA S+ R D S + +FVGDL+ +VTD L F +
Sbjct: 125 QTYNGAIMPNGGQSFRLNWATFSAGERSRHDDSPDYTIFVGDLAADVTDYLLQETFRARY 184
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ D+ TGR++G+GFV F ++ + A+ ++ G R +R A+
Sbjct: 185 NSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAMTEMQGVLCSTRPMRIGPAS------ 238
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
++ ++ S+ N G + EN+P TT++VGNL VT L + F
Sbjct: 239 NKTPTTQSQPKASYQNSQPQGSQN------ENDPNNTTIFVGNLDPNVTDDHLRQVFSQY 292
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+++ N +L G+ ++ SWG P+
Sbjct: 293 --GELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPS 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 90/203 (44%), Gaps = 35/203 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL + + L+ CF+ + +V+ +++T +S G+GF+ F ++ A+ +
Sbjct: 68 LWIGDLQYWMDENYLYTCFAHTGEVTSVKVIRNKQTSQSEGYGFIEFNSRAGAERILQTY 127
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + G + R NWA S G+ ++D+P+
Sbjct: 128 NGAIMPNGGQSFRLNWAT-----------------------FSAGERSRHDDSPD----- 159
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALC-----VGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
T++VG+L+++VT L F A + D R KG+GFVR+S E A+
Sbjct: 160 YTIFVGDLAADVTDYLLQETFRARYNSVKGAKVVIDRLTGRTKGYGFVRFSDESEQVRAM 219
Query: 308 QMGNARILCGKPIKCSWGSKPTP 330
+ +P++ S TP
Sbjct: 220 TEMQGVLCSTRPMRIGPASNKTP 242
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 150/307 (48%), Gaps = 34/307 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++G + P + ++ VF++ TG K+I+ DKSS Y FV+ F+ AA +
Sbjct: 52 TLWMGELEPWMDENFIKGVFATATGEQVNVKVIR-DKSSGNAGYCFVE-FNSTDAASKAL 109
Query: 104 TLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
LNG + + K+NWA + +R+D F++FVGDL PEV + L + F FP
Sbjct: 110 ALNGTPVPNSARMFKLNWASGGGINDRRDDRGPEFSIFVGDLGPEVNEFVLVSLFQARFP 169
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC--------NWA 209
+C A++M D TG+SRG+GFV F +++D Q A+ ++ G + GNR +R N
Sbjct: 170 SCKSAKIMTDAVTGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 229
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDGQE--KSNEDAP---------ENNPQYTTVYVG 258
GA G + + + G+ G + + AP +P TTV+VG
Sbjct: 230 PYGAQQGHQMPPAMHPHQPQAFYGVPPGPQFNQGYGAAPQFQQQQMNQFTDPNNTTVFVG 289
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 290 GLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNS 347
Query: 319 PIKCSWG 325
++ SWG
Sbjct: 348 RVRLSWG 354
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 146/290 (50%), Gaps = 27/290 (9%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F+ TG L+ KLI+ ++ YGF+++ A +
Sbjct: 94 VRTLWIGDLQYWMDENYISACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVL 153
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + Q ++NWA A +R+DT + +FVGDL+ +VTD L F V +P+
Sbjct: 154 QTYNGAMMPNVEQTYRLNWASAGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSV 212
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA +G ++
Sbjct: 213 KGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQE 272
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ ++ V +S+ D P TT++VG L VT L + F G
Sbjct: 273 KVPSAQGV------------QSDSD-----PSNTTIFVGGLDPSVTDDMLKQVFTPY--G 313
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV+++ A A+ + ++ G+ ++ SWG P+
Sbjct: 314 DVVHVKIPVGKRCGFVQFANRASADEALVLLQGTLIGGQNVRLSWGRSPS 363
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 25/186 (13%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRS 97
D + +++VG++ VT+ +LQE F P ++G K++ + YGFV + D
Sbjct: 180 DDTPDYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSE 239
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASS--------------QREDTSGHFNVFVGDLSPE 143
A A+ +NG +P+++ A Q + + +FVG L P
Sbjct: 240 QARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNTTIFVGGLDPS 299
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
VTD L F+ + ++ ++ G FV F N+ A A+ L G +G +
Sbjct: 300 VTDDMLKQVFTPYGDVVHVKIPVGKRCG------FVQFANRASADEALVLLQGTLIGGQN 353
Query: 204 IRCNWA 209
+R +W
Sbjct: 354 VRLSWG 359
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT+ +L++VF+ G + K+ + GFV + +R SA A+V L G
Sbjct: 290 TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC--GFVQFANRASADEALVLLQGT 347
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S R+
Sbjct: 348 LIGGQNVRLSWGRSPSNRQ 366
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 148/311 (47%), Gaps = 32/311 (10%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDKSS---YGFVDYFDRRSAA 99
+ + +++++G + P + ++ VFS+ +G K+I+ S Y FV+ F+ AA
Sbjct: 38 SESSKTLWMGELEPWMDENFVKNVFSTVSGEAVNVKVIRDRASGNAGYCFVE-FNTADAA 96
Query: 100 LAIVTLNGRHIFG--QPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFS 154
+TLNG + + K+NWA +R+D S F++FVGDL PEV + L + F
Sbjct: 97 TKALTLNGSPVPNSTRAFKLNWASGGGLVDRRDDRSPEFSIFVGDLGPEVNEFVLVSLFQ 156
Query: 155 V-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
FP+C A++M D TG+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 157 ARFPSCKSAKIMTDAVTGQSRGYGFVRFSDETDQQRALVEMQGVYCGNRPMRISTATPKT 216
Query: 214 TS-----GDEKQSSDSKSVVELTNGISDG---------QEKSNEDAPE-----NNPQYTT 254
S G Q + + G Q AP+ +P TT
Sbjct: 217 RSHQYGQGQHGQHMPAHGPAQGNMGWGGMGNGGNGGYYQPGFGPMAPQPMNQFTDPNNTT 276
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
V+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 277 VFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYP 334
Query: 315 LCGKPIKCSWG 325
+ ++ SWG
Sbjct: 335 IGNSRVRLSWG 345
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 141/292 (48%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 115 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLE 174
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G HI QP ++NWA S +R D + ++FVGDL+ +V D TL FS +
Sbjct: 175 GFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYS 233
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R A TSG
Sbjct: 234 SVKGAKVVIDANTGRSKGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGT 293
Query: 218 EKQS-SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+ S ++S +LTN TTV+VG L V+ DL + F
Sbjct: 294 SGPTGSAARSDGDLTN--------------------TTVFVGGLDPNVSEDDLRQTFSQY 333
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++ A A+Q N + + ++ SWG P
Sbjct: 334 --GEISSVKIPVGKQCGFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNP 383
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D ++ S++VG++ V + L E FS ++G K++ + YGFV + D
Sbjct: 201 RSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 260
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY-----------ASSQREDTS-GHFNVFVGDLSPE 143
A+ +NG + +P+++ A S+ R D + VFVG L P
Sbjct: 261 NEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPN 320
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 321 VSEDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQT 374
Query: 204 IRCNWA 209
+R +W
Sbjct: 375 VRLSWG 380
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 145/293 (49%), Gaps = 28/293 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLE--GCKLIKKDKSS----YGFVDYFDRRSAALA 101
++++VG++ + A L F+S E K+I+ + YGFV++ A
Sbjct: 103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKV 162
Query: 102 IVTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFS-V 155
+ NG + QP ++NWA S+ + E+ ++FVGDL+P+V+DA L FS
Sbjct: 163 LQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEK 222
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A+V+ D TGRS+G+GFV F ++ + A+ ++NG +R +R A T+
Sbjct: 223 YPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTN 282
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
G ++Q S G +E N TT++VG L S VT DL + F
Sbjct: 283 GYQQQGGYMPS----------GAFTRSEGDTIN----TTIFVGGLDSSVTDEDLKQPFSE 328
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ KG GFV++ P A A++ N ++ + ++ SWG P
Sbjct: 329 F--GEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNP 379
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 141/302 (46%), Gaps = 32/302 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++G + P + ++ ++ + G K+I+ + Y FVD+ +AA A+ L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKAL-NL 123
Query: 106 NGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
NG+ I +P K+NWA A R++ F++FVGDL PEVT+ L F + +P+
Sbjct: 124 NGQLIPNSNRPFKLNWASGGGLADRSRDERGPEFSIFVGDLGPEVTEFVLVQLFQNKYPS 183
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS--- 215
A++M D +G SRG+GFV F ++ED Q A+ ++ G + GNR +R + A S
Sbjct: 184 TKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKSGGP 243
Query: 216 ------------GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSE 263
G S + N Q + P N TTV+VG LS
Sbjct: 244 GGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNN----TTVFVGGLSGY 299
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
VT +L F G I V++ KG GFV++ A +AI + ++ S
Sbjct: 300 VTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 357
Query: 324 WG 325
WG
Sbjct: 358 WG 359
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 142/281 (50%), Gaps = 34/281 (12%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAA 99
+ C+++++G+I + +F+S G KLI+ DK + YGF+++ +R A
Sbjct: 3 TECKTLWMGDIQMHWDETFISSLFASAGEQPVVKLIR-DKVTGYPAGYGFLEFPTQRGAQ 61
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
+ T NG+ I ++NW A +R +TS ++FVGDL+P+VTD L + F S F
Sbjct: 62 QVLDTYNGQVIPNTMHRFRMNWG-AGGRRIETSDDHSIFVGDLAPDVTDELLLSTFNSRF 120
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ D T S+GFGFV F ++E+A A+ +NG + +R +R + A + + S
Sbjct: 121 TSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERSKS- 179
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+++ APE TTV+VG L T +L F AL
Sbjct: 180 ---------------------RQQGAFGAPEEEGTNTTVFVGGLDPSTTEDELRARFGAL 218
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG 317
G I V+V +G GFV+Y++ A +AI N ++ G
Sbjct: 219 --GEIVSVKVPPGRGCGFVQYTSKEAAEVAITQMNGTVISG 257
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 20/170 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKL----IKKDKSSYGFVDYFDR 95
R + S S++VG++ P VT+ LL F+S + G K+ + + +GFV + +
Sbjct: 89 RIETSDDHSIFVGDLAPDVTDELLLSTFNSRFTSVRGAKVVMDPVTRMSKGFGFVRFGSK 148
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQR---------EDTSGHFNVFVGDLSPEVTD 146
A A+ T+NG + +P++V+ A S+ E+ + VFVG L P T+
Sbjct: 149 EEADQALQTMNGVYCSSRPMRVSVATERSKSRQQGAFGAPEEEGTNTTVFVGGLDPSTTE 208
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
L A F +V RG GFV + ++E A+ AI +NG
Sbjct: 209 DELRARFGALGEIVSVKVP------PGRGCGFVQYTSKEAAEVAITQMNG 252
>gi|294884882|gb|ADF47449.1| TIA1-like protein [Dugesia japonica]
Length = 383
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 113/206 (54%), Gaps = 21/206 (10%)
Query: 124 SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
S +EDTS H+++FVGD++PE+ L FS+F ++ +++ D T + +G+GFV++
Sbjct: 104 STQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVAYAT 163
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATS--GDEKQSSDSKSVVELTNGISDGQEKS 241
+E+A+ A+N +NGK+LG RQIR NWA + G +++ D V +S
Sbjct: 164 KEEAEEALNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPLDYNEVFA-------ASSES 216
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHP 301
N T+YVG +++ + L F G I +VR+ ++KG+ FVR+ +H
Sbjct: 217 N----------CTIYVGGITNGLCEELLRESFKEF--GDILEVRIFKEKGYAFVRFDSHE 264
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
A AI + + + + KCSWG +
Sbjct: 265 GATQAIIRMHGKEVGSQLCKCSWGKE 290
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 106/232 (45%), Gaps = 36/232 (15%)
Query: 18 YQYH----PSLLAAPQIE-PILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTG 72
YQ H P L APQ PI N+ + D S ++VG+I P++ L+E FS G
Sbjct: 80 YQTHTLTIPQLTLAPQTHAPI--NNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFG 137
Query: 73 PLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------- 120
+ CK+IK + YGFV Y + A A+ +NG+ + + I+ NWA
Sbjct: 138 RVTECKIIKDMHTQKPKGYGFVAYATKEEAEEALNKMNGKFLGTRQIRTNWAIRRPPQPP 197
Query: 121 --------YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR 172
Y + + ++VG ++ + + L F F + R+ +
Sbjct: 198 GKDQKPLDYNEVFAASSESNCTIYVGGITNGLCEELLRESFKEFGDILEVRIF------K 251
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+G+ FV F + E A AI ++GK +G++ +C+W G S D K++S +
Sbjct: 252 EKGYAFVRFDSHEGATQAIIRMHGKEVGSQLCKCSW---GKESNDLKETSQN 300
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 241 SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT----IEDVRVQRDKGFGFVR 296
+N E+ + ++VG+++ E+ + L F T I+D+ Q+ KG+GFV
Sbjct: 101 NNISTQEDTSNHYHIFVGDIAPEIETQFLRERFSLFGRVTECKIIKDMHTQKPKGYGFVA 160
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSK--PTPPGTSSTPL 338
Y+T EA A+ N + L + I+ +W + P PPG PL
Sbjct: 161 YATKEEAEEALNKMNGKFLGTRQIRTNWAIRRPPQPPGKDQKPL 204
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 142/302 (47%), Gaps = 36/302 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ +K S YGFV + + +
Sbjct: 91 PGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDEKGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + + TD L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEV 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F RVM D+K GRSRGFGFV++ + EDAQ A+N++NGK + + + A K
Sbjct: 211 FSAFGRTLSVRVMKDEK-GRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKR 269
Query: 213 -ATSGDEKQSSD--SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
G+ K+ D + ++ G++ +YV NL + L
Sbjct: 270 LERQGELKRKFDQIKQDRIQRYQGVN-------------------LYVKNLDDSIDDERL 310
Query: 270 HRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ F GTI +V D KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 311 RKEFAPY--GTITSAKVMTDGSQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALA 368
Query: 326 SK 327
+
Sbjct: 369 QR 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L + FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAECALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG N+F+ ++ + + L+ FS F
Sbjct: 72 MNYDVIKGRPIRIMW----SQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+K S+G+GFV F QE A AI +NG L +R++ + + + +
Sbjct: 128 CKVVCDEKG--SKGYGFVHFETQEAANRAIETMNGMLLNDRKV---FVGHFKSRKEREVE 182
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
SK++ ++T VY+ N + T L F A G
Sbjct: 183 FGSKAM-----------------------KFTNVYIKNFGEDFTDEKLKEVFSAF--GRT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
VRV +D +GFGFV Y+ H +A A+ N + + GK + K
Sbjct: 218 LSVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQK 268
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
P+ P SG+ DA T ++++G + P + ++ ++ G K+I+
Sbjct: 41 PAPFQGPASGEAASGSAQQGGDAKT--TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 82 K----DKSSYGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSG 131
+ Y FVD F +AA +TL+G I + K+NWA A RE+
Sbjct: 99 DKFSGSNAGYCFVD-FSSPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRSREERGP 157
Query: 132 HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
F++FVGDL PEV + L + F S FP+C A++M D +G SRG+GFV F ++ D Q A
Sbjct: 158 EFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRA 217
Query: 191 INDLNGKWLGNRQIRCNWAA---KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+ ++ G + GNR +R + A KG +G + G AP+
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 248 -----NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPE 302
+P TTV+VG LS VT +L F G I V++ KG GFV++
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHA 335
Query: 303 AALAIQMGNARILCGKPIKCSWG 325
A +AI + ++ SWG
Sbjct: 336 AEMAINQMQGYPIGNSRVRLSWG 358
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 149/323 (46%), Gaps = 24/323 (7%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
P+ P SG+ DA T ++++G + P + ++ ++ G K+I+
Sbjct: 41 PAPFQGPASGEAASGSAQQGGDAKT--TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIR 98
Query: 82 K----DKSSYGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSG 131
+ Y FVD F +AA +TL+G I + K+NWA A RE+
Sbjct: 99 DKFSGSNAGYCFVD-FSSPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRSREERGP 157
Query: 132 HFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
F++FVGDL PEV + L + F S FP+C A++M D +G SRG+GFV F ++ D Q A
Sbjct: 158 EFSIFVGDLGPEVNEYVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRA 217
Query: 191 INDLNGKWLGNRQIRCNWAA---KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+ ++ G + GNR +R + A KG +G + G AP+
Sbjct: 218 LTEMQGVYCGNRPMRISTATPKNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQ 277
Query: 248 -----NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPE 302
+P TTV+VG LS VT +L F G I V++ KG GFV++
Sbjct: 278 PMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHA 335
Query: 303 AALAIQMGNARILCGKPIKCSWG 325
A +AI + ++ SWG
Sbjct: 336 AEMAINQMQGYPIGNSRVRLSWG 358
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 33/291 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++ + L F S+G + K+I+ S YGF++++ SA A+
Sbjct: 104 RTIWVGDLQYWMDENYLHSCFGSSGEVVNIKVIRNRHSGVSEGYGFIEFYTHVSAEKALQ 163
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
+G H+ + K+NWA S +R + S ++FVGDL+ +VTDA L FS +
Sbjct: 164 NFSG-HVMPNTDRAFKLNWASYSMGEKRSEISSDHSIFVGDLAVDVTDAMLLELFSNKYR 222
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR A + GD
Sbjct: 223 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGD 282
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S +S V+ TN TVYVG L V+ +L + F
Sbjct: 283 SGTSPPRQSHVDSTN--------------------RTVYVGGLDPNVSEDELRKAFAKY- 321
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV++ +A A+ N + + ++ SWG P
Sbjct: 322 -GDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTIGKQAVRLSWGRSP 371
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 22/190 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R + S+ S++VG++ VT+A+L E+FS+ ++G K+I + YGFV + D
Sbjct: 190 RSEISSDHSIFVGDLAVDVTDAMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 249
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----------SGHFNVFVGDLSPEV 144
A+ +NG + +PI+V A + D+ S + V+VG L P V
Sbjct: 250 NDKIHAMTEMNGVYCSTRPIRVGPATPRRSQGDSGTSPPRQSHVDSTNRTVYVGGLDPNV 309
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ + ++ G FV F N+ DA+ A++ LNG +G + +
Sbjct: 310 SEDELRKAFAKYGDLASVKIPFGKQCG------FVQFVNRVDAEEALHGLNGSTIGKQAV 363
Query: 205 RCNWAAKGAT 214
R +W A+
Sbjct: 364 RLSWGRSPAS 373
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 141/287 (49%), Gaps = 25/287 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAALA 101
C+++++G+I A + +F+S KLI+ DK + YGF+++ ++ A
Sbjct: 5 CKTLWMGDIQLNWDEAYIGSLFASAVEQPSIKLIR-DKVTGYPAGYGFLEFPSQQGAQAV 63
Query: 102 IVTLNGRHIFG--QPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+ T NG+ + ++NW A +R DT ++FVGDL+PEV+D L + FS F +
Sbjct: 64 LNTFNGQIVPNTIHRFRLNWG-AGGRRIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSS 122
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D T +GFGFV F ++ +A A+ +NG + +R +R + A +
Sbjct: 123 VRGAKVVIDPVTRMPKGFGFVRFGDKGEADQALQTMNGVYCSSRPMRVSVATDRTKTRGI 182
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
S +VV N +G TTV++G L T DL F +
Sbjct: 183 MPPPISYTVVGTGNTEEEGAN-------------TTVFIGGLDPSTTEDDLRARFG--VI 227
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V+V +G GFV+Y T A +AI N ++ G ++C+WG
Sbjct: 228 GEIMSVKVPPGRGCGFVQYVTKDAADVAINQMNGALINGVKVRCAWG 274
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLI----KKDKSSYGFVDYFDR 95
R D S++VG++ P+V++ LL FS+ + G K++ + +GFV + D+
Sbjct: 89 RIDTVEDHSIFVGDLAPEVSDELLLSTFSTRFSSVRGAKVVIDPVTRMPKGFGFVRFGDK 148
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------------YASSQREDTSGHFNVFV 137
A A+ T+NG + +P++V+ A + E+ + VF+
Sbjct: 149 GEADQALQTMNGVYCSSRPMRVSVATDRTKTRGIMPPPISYTVVGTGNTEEEGANTTVFI 208
Query: 138 GDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
G L P T+ L A F V +V RG GFV + ++ A AIN +NG
Sbjct: 209 GGLDPSTTEDDLRARFGVIGEIMSVKVP------PGRGCGFVQYVTKDAADVAINQMNGA 262
Query: 198 WLGNRQIRCNWAAKGA 213
+ ++RC W A
Sbjct: 263 LINGVKVRCAWGRSAA 278
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNSHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSVDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGF+S+ + E + +AI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKVLN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KSV N +
Sbjct: 88 MIKLYGKPIRVN-----------KASQDKKSVDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V L+ F A V + + ++ RD +GFGF+ Y + + AI+
Sbjct: 115 FIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC + I S+ K
Sbjct: 174 MNGQYLCNRQITVSYAYK 191
>gi|367014399|ref|XP_003681699.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
gi|359749360|emb|CCE92488.1| hypothetical protein TDEL_0E02450 [Torulaspora delbrueckii]
Length = 472
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 159/332 (47%), Gaps = 41/332 (12%)
Query: 32 PILSGNLPPRFDASTCRS--VYVGNIHPQVTNALLQEVFSSTGPLE-GCKLIKKDKSS-- 86
P SGN+ R S R+ +Y+G++ P +++ +++S G KL+ ++++
Sbjct: 32 PAQSGNV--RLSGSQSRNNQLYMGDLDPSWDENVIRSIWNSLGESNVEIKLMWNNRNAGV 89
Query: 87 -----YGFVDYFDRRSAALAIVTLNGRHIFGQP---IKVNWAYASSQREDTSGHFNVFVG 138
Y FV + R A+ A++ NG I G P +++NW+ AS D S +VFVG
Sbjct: 90 RTHLGYCFVQFSSRSQASNALLK-NGMAIPGYPSKTLRLNWSSASGNSADGSNEISVFVG 148
Query: 139 DLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 197
DL+P VT++ LF F S P+ S+A+VM+DQ TG S+G+ FV F NQED Q A+ ++ G
Sbjct: 149 DLAPNVTESDLFELFISKCPSTSNAKVMYDQVTGVSKGYAFVRFGNQEDQQRALQEMTGT 208
Query: 198 WLGNRQIRCNWAA----------------KGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
+L R IR A KG + + S + I Q+
Sbjct: 209 FLKGRAIRVGSAGHQNQRNRNGPGLENKLKGLNATVSSPKPANISSTNFSQFILPTQQLP 268
Query: 242 --NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYST 299
N NN TT++V +LS VT +L F G + ++ +K GFV+Y
Sbjct: 269 PLNSFTDRNN---TTLFVSSLSHMVTENELKAFFQPF--GNVIYAKLPENKQCGFVQYVD 323
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSKPTPP 331
A +AI + G IK SWG +P P
Sbjct: 324 RASAEMAILKLQGFPIRGSRIKISWG-RPAKP 354
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 48/343 (13%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGF 89
++ N P S ++++ N+ + N L + FS+ G + CK+ D +GF
Sbjct: 195 VMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGF 254
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTD 146
V Y SA A+ +LNG I +P+ V +R+++S NVFV +LS T
Sbjct: 255 VQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTK 314
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L FS + T + A VM G+SR FGFV+F + +DA A+ +LNGK + +++
Sbjct: 315 EDLIKVFSEYGTITSAVVMIGM-DGKSRCFGFVNFESPDDAARAVEELNGKKINDKE--- 370
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
W A E++ + E+S +DA + Q +Y+ NL +T
Sbjct: 371 -WYVGRAQKKSEREMDLKRRF-----------EQSMKDAADKY-QGQNLYLKNLDDGITD 417
Query: 267 VDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L F G I ++ RD KG GFV +ST EA+ A+ N +++ GKP+
Sbjct: 418 DQLRELFSNF--GKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLY 475
Query: 322 CSWGS----------------KPTPPGTSSTPLPP--PPAPHL 346
++ +P P S TP P PP P L
Sbjct: 476 VAFAQRKEERKAMLQAQFSQMRPVPMTPSMTPRLPMYPPMPTL 518
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 131/281 (46%), Gaps = 45/281 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L E+FS G + C+ + +S Y +V+Y + AA A+
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 105 LNGRHIFGQPIKVNWAYA--SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + +PI+V ++ SS+R SG N+F+ +L + + TL FS F
Sbjct: 183 LNFAPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSC 239
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D G+S+GFGFV + +E AQSA+ LNG + ++ + + KQ
Sbjct: 240 KVAMDD-IGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLR-------KQER 291
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
D+ S + ++ V+V NLS T DL + F GTI
Sbjct: 292 DNSS---------------------DKAKFNNVFVKNLSESTTKEDLIKVFSEY--GTIT 328
Query: 283 DVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
V + + FGFV + + +AA A++ N + + K
Sbjct: 329 SAVVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDK 369
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++VGDL VTD+ L+ FS RV D + RS G+ +V++ N DA A+
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
LN L N+ IR + SN D
Sbjct: 183 LNFAPLNNKPIRVMY--------------------------------SNRDPSSRRSGSA 210
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQ 308
+++ NL + + LH F A G I +V D KGFGFV+Y A A++
Sbjct: 211 NIFIKNLDKTIDNKTLHDTFSAF--GAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMK 268
Query: 309 MGNARILCGKPI 320
N ++ KP+
Sbjct: 269 SLNGMLINDKPV 280
Score = 45.1 bits (105), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L + VT L+ F + V DV +R G+ +V YS +AA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 309 MGNARILCGKPIKCSWGSK 327
N L KPI+ + ++
Sbjct: 182 ALNFAPLNNKPIRVMYSNR 200
>gi|449459840|ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
gi|449498825|ref|XP_004160645.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
Length = 379
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGF+++ A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFIEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG SRGFGF+S+ + E + +AI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 51/227 (22%)
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
G ++ GQ +A + +D + +VG+L P+V++ L+ F + V
Sbjct: 10 GANLLGQ-------HAPERNQDATA----YVGNLDPQVSEELLWELFVQAGPVVNVYVPK 58
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D+ T +G+GF+ FR++EDA AI LN L + IR N K S D KS
Sbjct: 59 DRVTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVN-----------KASQDKKS 107
Query: 227 VVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
+ N +++GNL +V L+ F A V + + ++
Sbjct: 108 LDVGAN----------------------LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKI 144
Query: 287 QRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
RD +GFGF+ Y + + AI+ N + LC + I S+ K
Sbjct: 145 MRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYK 191
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 138/291 (47%), Gaps = 33/291 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++ + L F +G + K+I+ S YGFV+++ SA A+
Sbjct: 109 RTIWVGDLQYWMDENYLHSCFGPSGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 168
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
+G H+ + K+NWA S +R + S ++FVGDL+ +VTD L FS +
Sbjct: 169 NFSG-HVMPNTDRAFKLNWASYSMGEKRTELSSDHSIFVGDLAVDVTDEMLLELFSNKYR 227
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR A + GD
Sbjct: 228 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGD 287
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S +S V+ TN TVYVG L V+ +L + F
Sbjct: 288 SGSSPPRQSDVDSTN--------------------RTVYVGGLDPNVSEDELRKAFAKY- 326
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV++ +A A+Q N + + ++ SWG P
Sbjct: 327 -GDLASVKIPFGKQCGFVQFVNRADAEEALQGLNGATIGKQAVRLSWGRSP 376
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R + S+ S++VG++ VT+ +L E+FS+ ++G K+I + YGFV + D
Sbjct: 195 RTELSSDHSIFVGDLAVDVTDEMLLELFSNKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 254
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----------SGHFNVFVGDLSPEV 144
A+ +NG + +PI+V A + D+ S + V+VG L P V
Sbjct: 255 NDKTHAMTEMNGVYCSTRPIRVGPATPRRSQGDSGSSPPRQSDVDSTNRTVYVGGLDPNV 314
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ + ++ G FV F N+ DA+ A+ LNG +G + +
Sbjct: 315 SEDELRKAFAKYGDLASVKIPFGKQCG------FVQFVNRADAEEALQGLNGATIGKQAV 368
Query: 205 RCNWAAKGAT 214
R +W A+
Sbjct: 369 RLSWGRSPAS 378
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 143/302 (47%), Gaps = 24/302 (7%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
DA T ++++G + P + ++ ++ G K+I+ S Y FVD F +A
Sbjct: 62 DAKT--TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAA 118
Query: 99 ALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFAC 152
A +TL+G I + K+NWA A RE+ F++FVGDL PEV + L +
Sbjct: 119 AAKALTLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSL 178
Query: 153 F-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA- 210
F S FP+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 179 FQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATP 238
Query: 211 --KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSE 263
KG +G + G AP+ +P TTV+VG LS
Sbjct: 239 KNKGPGAGPGGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGY 298
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
VT +L F G I V++ KG GFV++ A +AI + ++ S
Sbjct: 299 VTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLS 356
Query: 324 WG 325
WG
Sbjct: 357 WG 358
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 136/295 (46%), Gaps = 21/295 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ S Y FVD F +AA +T
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FTTPAAAAKALT 124
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
L+G I + K+NWA A RE+ F++FVGDL PEV + L + F S FP
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAG 244
Query: 218 EKQSSDSKSVVELTNGIS--DGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLH 270
+ G AP+ +P TTV+VG LS VT +L
Sbjct: 245 AGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 304
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 305 SFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 357
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG NVF+ +L + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AI +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGH----FKSQREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NLS ++ L F A G +
Sbjct: 182 ELGAQALEFTN----------------------IYVKNLSVDMDEQGLQDLFFAF--GNM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQK 268
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 136/297 (45%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + + L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +LS ++ + L
Sbjct: 151 AQQAIGTMNGMLLNDRKVFVGHFKSQREREAELGAQALEFTNIYVKNLSVDMDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D +G SRGFGFV+F E+AQ A++ +NGK + +Q+ A K
Sbjct: 211 FFAFGNMLSVKVMRD-NSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+Q+ + +L D Q + + +YV NL ++ L
Sbjct: 270 A----ERQNELKRRFEQLKQ---DRQTRY---------RGVNLYVKNLDDSISDEKLRTV 313
Query: 273 FHALCVGTIEDVRVQRD--KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + D KGFGFV +S+ EA A+ N I+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGDHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQR 370
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 309 MGNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 71 TMNFEVIKGQPIRIMWSQR 89
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 149/331 (45%), Gaps = 46/331 (13%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDY 92
+ G L P D + RSV+ G + QV ++++ FS + + Y FVD
Sbjct: 85 LWMGELEPWIDENFVRSVWFGMGY-QVNVKMIRDKFSGS------------NAGYCFVD- 130
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTD 146
F+ AA + LNG+ I + K+NWA A R+D +++FVGDL PEV +
Sbjct: 131 FENPDAAGRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNE 190
Query: 147 ATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L + F + +P+C A++M D +G SRG+GFV F +++D Q A++++ G + GNR +R
Sbjct: 191 YVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMR 250
Query: 206 CNWAAKGATSGD--------------------EKQSSDSKSVVELTNGISDGQEKSNEDA 245
+ A SG Q S+ G + N+
Sbjct: 251 ISTATPKNKSGGAAVPPGGMPQPGMPGGPAAGGPQMPGMYSMGAPPMGYYGAPQPMNQFT 310
Query: 246 PENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAAL 305
NN TTV+VG LS VT +L F G I V++ KG GFV++ A +
Sbjct: 311 DPNN---TTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEM 365
Query: 306 AIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
AI + ++ SWG G + T
Sbjct: 366 AINQMQGYPIGNSRVRLSWGRSQNNSGPAGT 396
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 98/211 (46%), Gaps = 37/211 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++G+L P + + + + + + +++ D+ +G + G+ FV F N + A A+ L
Sbjct: 85 LWMGELEPWIDENFVRSVWFGMGYQVNVKMIRDKFSGSNAGYCFVDFENPDAAGRAL-QL 143
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG+ + NRQ + NWA+ G G++D +S +D P+Y
Sbjct: 144 NGQVIPNSNRQFKLNWASGG--------------------GLAD---RSRDD---RGPEY 177
Query: 253 TTVYVGNLSSEVTS---VDLHRHFHALC--VGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
+ ++VG+L EV + L ++ + C + D +G+GFVR++ + A+
Sbjct: 178 S-IFVGDLGPEVNEYVLMSLFQNKYPSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKAL 236
Query: 308 QMGNARILCG-KPIKCSWGSKPTPPGTSSTP 337
+ CG +P++ S + G ++ P
Sbjct: 237 HEMQG-VYCGNRPMRISTATPKNKSGGAAVP 266
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 19/293 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ S Y FVD F +AA ++
Sbjct: 65 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAAAAKALS 123
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
LNG + + K+NWA A R+D +++FVGDL PEV + L + F S FP
Sbjct: 124 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 183
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 184 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 243
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLHRH 272
AP+ +P TTV+VG LS VT +L
Sbjct: 244 VVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 303
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 304 FQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 354
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 146/312 (46%), Gaps = 35/312 (11%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
DA T ++++G + P + ++ V+ G K+I+ DK S Y F+D F +A
Sbjct: 304 DAKT--TLWMGELEPWIDENFVRSVWFGMGEQVNVKMIR-DKFSGNAGYCFID-FSSPAA 359
Query: 99 ALAIVTLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
A ++LNG I +P K+NWA + +R+D +++FVGDL PEV + L + F
Sbjct: 360 AAKALSLNGSMIPNTARPFKLNWASGGGLADRRDDRGPEYSIFVGDLGPEVNEYVLVSLF 419
Query: 154 SV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-- 210
FP+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 420 QARFPSCKSAKIMTDPISGMSRGYGFVRFADEGDQQRALTEMQGVYCGNRPMRISTATPK 479
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----------------NNPQYT 253
A G + + G+ + AP +P T
Sbjct: 480 NKAGGGGPAGMPMQQGGPNMGPGMPAAPGMYSMGAPPPMQYGGGYGQQQPMNQFTDPNNT 539
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR 313
TV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 540 TVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 597
Query: 314 ILCGKPIKCSWG 325
+ ++ SWG
Sbjct: 598 PIGNSRVRLSWG 609
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 153/343 (44%), Gaps = 48/343 (13%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGF 89
++ N P S ++++ N+ + N L + FS+ G + CK+ D +GF
Sbjct: 195 VMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGF 254
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTD 146
V Y SA A+ +LNG I +P+ V +R+++S NVFV +LS T
Sbjct: 255 VQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTK 314
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L FS + T + A VM G+SR FGFV+F + +DA A+ +LNGK + +++
Sbjct: 315 EDLIKVFSEYGTITSAVVMIGMD-GKSRCFGFVNFESPDDAARAVEELNGKKINDKE--- 370
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
W A E++ + E+S +DA + Q +Y+ NL +T
Sbjct: 371 -WYVGRAQKKSEREMDLKRRF-----------EQSMKDAADKY-QGQNLYLKNLDDGITD 417
Query: 267 VDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L F G I ++ RD KG GFV +ST EA+ A+ N +++ GKP+
Sbjct: 418 DQLRELFSNF--GKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLY 475
Query: 322 CSWGS----------------KPTPPGTSSTPLPP--PPAPHL 346
++ +P P S TP P PP P L
Sbjct: 476 VAFAQRKEERKAMLQAQFSQMRPVPMTPSMTPRLPMYPPMPTL 518
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 41/279 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L E+FS G + C+ + +S Y +V+Y + AA A+
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + +PI+V ++ SS+R SG N+F+ +L + + TL FS F
Sbjct: 183 LNFAPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSC 239
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D G+S+GFGFV + +E AQSA+ LNG + ++ + + KQ
Sbjct: 240 KVAMDD-IGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLR-------KQER 291
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
D+ S + ++ V+V NLS T DL + F T
Sbjct: 292 DNSS---------------------DKAKFNNVFVKNLSESTTKEDLIKVFSEYGTITSA 330
Query: 283 DVRVQRD---KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V + D + FGFV + + +AA A++ N + + K
Sbjct: 331 VVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDK 369
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 39/192 (20%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++VGDL VTD+ L+ FS RV D + RS G+ +V++ N DA A+
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
LN L N+ IR + SN D
Sbjct: 183 LNFAPLNNKPIRVMY--------------------------------SNRDPSSRRSGSA 210
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQ 308
+++ NL + + LH F A G I +V D KGFGFV+Y A A++
Sbjct: 211 NIFIKNLDKTIDNKTLHDTFSAF--GAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMK 268
Query: 309 MGNARILCGKPI 320
N ++ KP+
Sbjct: 269 SLNGMLINDKPV 280
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L + VT L+ F + V DV +R G+ +V YS +AA A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 309 MGNARILCGKPIKCSWGSK 327
N L KPI+ + ++
Sbjct: 182 ALNFAPLNNKPIRVMYSNR 200
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +GRSRGFGFV++ N E+AQ A++++NGK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ N Q +YV NL + L +
Sbjct: 270 I----ERQSELKRKFEQIK------QERINRY------QGVNLYVKNLDDGIDDDRLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F L GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 F--LPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+Y+G++HP VT A+L E FS GP+ C+ I +S SY ++++ A A+ T
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F E A AI +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH----FKSRREREL 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V+E TN VY+ N ++ L F A G
Sbjct: 182 EYGAKVMEFTN----------------------VYIKNFGEDMDDKRLREIFSAF--GNT 217
Query: 282 EDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V R +GFGFV Y H EA A+ N + + G+ I K
Sbjct: 218 LSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + RVM D TG+S+GFGFVSF EDAQ A++D+NGK L RQ+ A K
Sbjct: 211 FGNYGPALSVRVMTDD-TGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E+ +D Q +YV NL + L +
Sbjct: 270 G---------------ERQNELKRKFEQMKQDR-MTRYQGVNLYVKNLDDGLDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAREFTN----------------------VYIKNFGEDMDDEKLKELFGNYGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L G+ + K
Sbjct: 220 VRVMTD-DTGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +GRSRGFGFV++ N E+AQ A++++NGK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ N Q +YV NL + L +
Sbjct: 270 I----ERQSELKRKFEQIK------QERINRY------QGVNLYVKNLDDGIDDDRLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F L GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 F--LPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+Y+G++HP VT A+L E FS GP+ C+ I +S SY ++++ A A+ T
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F E A AI +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH----FKSRREREL 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V+E TN VY+ N ++ L F A G
Sbjct: 182 EYGAKVMEFTN----------------------VYIKNFGEDMDDKRLREIFSAF--GNT 217
Query: 282 EDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V R +GFGFV Y H EA A+ N + + G+ I K
Sbjct: 218 LSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 136/294 (46%), Gaps = 20/294 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK-----KDKSSYGFVDYFDRRSAALAIV 103
++++G + P + ++ ++ G K+I+ + + Y FVD F +AA +
Sbjct: 65 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FSSPAAAAKAL 123
Query: 104 TLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
+LNG + + K+NWA A R+D +++FVGDL PEV + L + F S F
Sbjct: 124 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 183
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
P+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 184 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 243
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLHR 271
AP+ +P TTV+VG LS VT +L
Sbjct: 244 GVVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRS 303
Query: 272 HFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 304 FFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 355
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 113 QPIKVNWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQK 169
QP ++NWA S+ +R D ++FVGDL+ +VTDA L F+ +P+ A+V+ D
Sbjct: 172 QPFRLNWATFSTGDRRTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSN 231
Query: 170 TGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVV- 228
TGRS+G+GFV F ++ + A+N++NG + +R +R A SG ++Q S V+
Sbjct: 232 TGRSKGYGFVRFGDENERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLA 291
Query: 229 --ELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRV 286
+NG ++N D+ TT++VG L SEVT DL + F G + V++
Sbjct: 292 GGNASNGAVAQGSQANGDSTN-----TTIFVGGLDSEVTDEDLRQSFSQF--GEVVSVKI 344
Query: 287 QRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
KG GFV+++ A A+Q N ++ + ++ SWG P
Sbjct: 345 PVGKGCGFVQFANRNSAEDALQRLNGTVIGKQTVRLSWGRNP 386
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 40/203 (19%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA + S++VG++ VT+ALLQE F++ P ++G K++ + YGFV + D
Sbjct: 187 RTDAGSDLSIFVGDLASDVTDALLQETFATRYPSVKGAKVVTDSNTGRSKGYGFVRFGDE 246
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------YAS------------------SQR 126
+ A+ +NG + +P+++ A Y+S SQ
Sbjct: 247 NERSRAMNEMNGIYCSSRPMRIGVATPKKASGYQQQYSSQALVLAGGNASNGAVAQGSQA 306
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQED 186
S + +FVG L EVTD L FS F ++ +G GFV F N+
Sbjct: 307 NGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKI------PVGKGCGFVQFANRNS 360
Query: 187 AQSAINDLNGKWLGNRQIRCNWA 209
A+ A+ LNG +G + +R +W
Sbjct: 361 AEDALQRLNGTVIGKQTVRLSWG 383
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 143/321 (44%), Gaps = 32/321 (9%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAA 99
DA T ++++G + P + ++ V+ G K+I+ + Y F+D+ +AA
Sbjct: 69 DAKT--TLWMGELEPWIDENFIRSVWFGMGEQVNVKMIRDKFSGNAGYCFIDFTSPAAAA 126
Query: 100 LAIVTLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACFS 154
A+ +LNG I +P K+NWA + +R+D F++FVGDL PEV + L + F
Sbjct: 127 KAL-SLNGSMIPNTTRPFKLNWASGGGLADRRDDRGPEFSIFVGDLGPEVNEYVLVSLFQ 185
Query: 155 V-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
FP+C A++M D +G SRG+GFV F + D Q A+ ++ G + GNR +R + A
Sbjct: 186 ARFPSCKSAKIMTDPISGMSRGYGFVRFAEEGDQQRALTEMQGVYCGNRPMRISTATPKN 245
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDA---------------PEN---NPQYTTV 255
SG + P N +P TTV
Sbjct: 246 KSGGAGPAGMQMQGGGGGGMPGAMGGAPGMYGMGGGPPMAGYYGTPQPMNQFTDPNNTTV 305
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VG LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 306 FVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPI 363
Query: 316 CGKPIKCSWGSKPTPPGTSST 336
++ SWG G + T
Sbjct: 364 GNSRVRLSWGRSQNNSGPAGT 384
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 26/290 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F+STG ++ KLI+ ++ YGF+++ R A +
Sbjct: 82 ARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVL 141
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + ++NWA A ++ D + +FVGDL+ +VTD L F +P+
Sbjct: 142 QTFNGAMMPNVEMAYRLNWATAG-EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSV 200
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA +++
Sbjct: 201 KGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAA------NKQ 254
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+++ + V GI +N+P +T++VG L T L + F G
Sbjct: 255 KANGVQEKVPTAQGIQT----------DNDPSNSTIFVGGLDPSATEDVLKQVFTPY--G 302
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV+Y++ A A+ M ++ G+ ++ SWG P+
Sbjct: 303 EVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQNVRLSWGRSPS 352
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P T +L++VF+ G + K+ + GFV Y R SA A++ L G
Sbjct: 279 TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC--GFVQYASRSSAEEALLMLQGT 336
Query: 109 HIFGQPIKVNWAYASSQREDTSGH-FNVFVG 138
I GQ ++++W + S ++ S FN + G
Sbjct: 337 MIEGQNVRLSWGRSPSNKQVQSQQDFNQWGG 367
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 145/290 (50%), Gaps = 26/290 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
R++++G++ + + F+STG ++ KLI+ ++ YGF+++ R A +
Sbjct: 82 ARTLWIGDLQYWMDENYVYNCFASTGEVQSVKLIRDKQTGQLQGYGFIEFTSRAGAERVL 141
Query: 103 VTLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTC 159
T NG + ++NWA A ++ D + +FVGDL+ +VTD L F +P+
Sbjct: 142 QTFNGAMMPNVEMTYRLNWATAG-EKHDDGADYTIFVGDLAADVTDYLLQETFRAQYPSV 200
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
A+V+ D+ T RS+G+GFV F + + A+ ++NG +R +R AA +++
Sbjct: 201 KGAKVVTDKLTMRSKGYGFVKFGDPTEQTRAMTEMNGMICSSRPMRIGPAA------NKQ 254
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+++ + V GI +N+P +T++VG L T L + F G
Sbjct: 255 KANGVQEKVPTAQGIQT----------DNDPSNSTIFVGGLDPSATEDVLKQVFTPY--G 302
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV+Y++ A A+ M ++ G+ ++ SWG P+
Sbjct: 303 EVVHVKIPVGKRCGFVQYASRSSAEEALLMLQGTMIEGQNVRLSWGRSPS 352
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P T +L++VF+ G + K+ + GFV Y R SA A++ L G
Sbjct: 279 TIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRC--GFVQYASRSSAEEALLMLQGT 336
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S ++
Sbjct: 337 MIEGQNVRLSWGRSPSNKQ 355
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 147/295 (49%), Gaps = 25/295 (8%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAA 99
A R++++G++ + L + TG + K+I+ ++S YGF+++ R A
Sbjct: 57 ADEVRTLWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRAGAE 116
Query: 100 LAIVTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
+ T NG + GQ ++NWA A +R D S +FVGDL+ +VTD L F
Sbjct: 117 RVLQTYNGTIMPNGGQNFRLNWATLSAGERRHDDSPDHTIFVGDLAADVTDYLLQETFRA 176
Query: 156 -FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
+P+ A+V+ D+ TGR++G+GFV F ++ + A+ ++ G R +R A+
Sbjct: 177 RYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAMTEMQGVLCSTRPMRIGPAS---- 232
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
++ S+ S+ N Q NE P N TT++VGNL VT L + F
Sbjct: 233 --NKNPSTQSQPKASYQN----PQGAQNEHDPNN----TTIFVGNLDPNVTDDHLRQVFG 282
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+++ N +L G+ ++ SWG P+
Sbjct: 283 HY--GELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGTLLGGQNVRLSWGRSPS 335
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++GDL + + L+ C + + +V+ +++T +S G+GF+ F ++ A+ +
Sbjct: 63 LWIGDLQYWMDENYLYTCLAHTGEVASVKVIRNKQTSQSEGYGFIEFTSRAGAERVLQTY 122
Query: 195 NGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
NG + G + R NWA A E+ ++D+P++
Sbjct: 123 NGTIMPNGGQNFRLNWATLSAG------------------------ERRHDDSPDH---- 154
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALC-----VGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
T++VG+L+++VT L F A + D R KG+GFVR+ E A+
Sbjct: 155 -TIFVGDLAADVTDYLLQETFRARYPSIKGAKVVIDRLTGRTKGYGFVRFGDESEQVRAM 213
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTP 337
+ +P++ S P T S P
Sbjct: 214 TEMQGVLCSTRPMRIGPASNKN-PSTQSQP 242
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ P VT+ L++VF G L K+ + GFV + DR A A+ LNG
Sbjct: 262 TIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRC--GFVQFADRSCAEEALRVLNGT 319
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ GQ ++++W + S ++
Sbjct: 320 LLGGQNVRLSWGRSPSNKQ 338
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 38/310 (12%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++G + P + ++ VF ++TG K+I+ DK+S Y FV++ +A+ A+
Sbjct: 60 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGYCFVEFTSSEAASKAL- 117
Query: 104 TLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
TLNG + + K+NWA + +R+D +++FVGDL PEV + L + F FP
Sbjct: 118 TLNGSPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 177
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+C A++M D +G+SRG+GFV F +++D Q A+ ++ G + GNR +R + A K G
Sbjct: 178 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRNHG 237
Query: 217 DEKQSSDSKSVVELTNGI-----------SDGQEKSNEDAPEN----------NPQYTTV 255
Q + + + G+ S Q AP N +P TTV
Sbjct: 238 GPYQQQHHGNQM-MAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTV 296
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARIL 315
+VG LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 297 FVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPI 354
Query: 316 CGKPIKCSWG 325
++ SWG
Sbjct: 355 GNSRVRLSWG 364
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 137/292 (46%), Gaps = 33/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++ + L F G + K+I+ S YGFV+++ SA A+
Sbjct: 93 RTIWVGDLQYWMDENYLHSCFGPGGEVVNIKVIRNRHSGVSEGYGFVEFYSHVSAEKALQ 152
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
+G H+ + K+NWA S +R + ++FVGDL+ +VTD L FS +
Sbjct: 153 NFSG-HVMPNTERAFKLNWASYSMGEKRSEVPPDHSIFVGDLAVDVTDEMLLELFSNKYR 211
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR A + GD
Sbjct: 212 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKTLAMTEMNGVYCSTRPIRVGLATPRRSQGD 271
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S +S V+ TN TVYVG L V+ +L + F
Sbjct: 272 SGSSPPRQSDVDSTN--------------------RTVYVGGLDPNVSEDELRKAFAKY- 310
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV++ +A A+Q N + + I+ SWG PT
Sbjct: 311 -GDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSPT 361
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 25 LAAPQIEPILSGNLPPRFDA--STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK 82
LA P+ SG+ PPR ST R+VYVG + P V+ L++ F+ G L K+
Sbjct: 262 LATPRRSQGDSGSSPPRQSDVDSTNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFG 321
Query: 83 DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA--SSQREDTSGH 132
+ GFV + +R A A+ LNG I Q I+++W + S Q GH
Sbjct: 322 KQC--GFVQFVNRVDAEEALQGLNGSTIGKQAIRLSWGRSPTSKQSRGDYGH 371
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 142/291 (48%), Gaps = 21/291 (7%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
++++VG++ + L FS TG L K+I+ + YGF+++ R +A +
Sbjct: 91 VKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIM 150
Query: 103 VTLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
T NG + Q ++NWA S +R D F++FVGDL +V+D L F S +
Sbjct: 151 QTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYS 210
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R + A ++G
Sbjct: 211 SVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAGV 270
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S G +G + +N+ TT++VG L T DL + F
Sbjct: 271 QHQYS----------GRGNGGSHAQGFPSDNDLNNTTIFVGRLDPNATDEDLRQVFGQY- 319
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV++ A A+Q + ++ + ++ SWG P
Sbjct: 320 -GELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSP 369
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 32/195 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V++ +LQE F S ++ K++ + YGFV + +
Sbjct: 178 RLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEE 237
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------YASSQREDTSGH------------FN 134
A A+ +NG + +P++++ A + S R + H
Sbjct: 238 SERARAMTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRGNGGSHAQGFPSDNDLNNTT 297
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG L P TD L F + ++ +G GFV F N+ A+ A+ L
Sbjct: 298 IFVGRLDPNATDEDLRQVFGQYGELVSVKIP------VGKGCGFVQFGNRASAEEALQRL 351
Query: 195 NGKWLGNRQIRCNWA 209
+G + + +R +W
Sbjct: 352 HGTVIRQQTVRLSWG 366
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D+ +G+S+GFGFVSF EDAQ A++++NGK L RQ+ A K
Sbjct: 211 FSKYGPALSIRVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E+ +D Q +YV NL + L +
Sbjct: 270 G---------------ERQNELKRKFEQMKQDR-MTRYQGVNLYVKNLDDGLDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAREFTN----------------------VYIKNFGEDMDDEKLKELFSKYGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + D + KGFGFV + H +A A+ N + L G+ + K
Sbjct: 220 IRVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQK 268
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 139/290 (47%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
+V+V N+ + N L + FS+ G + CK+I + S YGFV + + SA AI +N
Sbjct: 134 NVFVKNLEKSIDNKALYDTFSTFGRILSCKVISDENGSKGYGFVHFETQESAGKAIEKMN 193
Query: 107 GRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
G + + V + +RE G + N+++ + + D L F+ +
Sbjct: 194 GMLLNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLS 253
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+VM D GRS+GFGFVSF++ EDAQ+A++D+NGK L +QI A K E+Q+
Sbjct: 254 VKVMTDD-CGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQK----KRERQT 308
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ ++ K N+ Q +Y+ NL + L + F GTI
Sbjct: 309 ELKRHFEQI---------KQNQHI---RYQGVNLYIKNLDDTINDEHLRKEFSPF--GTI 354
Query: 282 EDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V R KGFGFV +S+ +AA A + N +++ KP+ S +
Sbjct: 355 TSAKVMMENGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLAQR 404
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 127/292 (43%), Gaps = 40/292 (13%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAAL 100
S S+YVG++H VT ++L E FS GP+ ++ + + Y +V++ R A
Sbjct: 42 SPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRAHAEW 101
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ T+N I G PI++ W+ QR+ G NVFV +L + + L+ FS F
Sbjct: 102 VLATMNLDVIKGNPIRIMWSQRDPGQRKRGVG--NVFVKNLEKSIDNKALYDTFSTFGRI 159
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
+V+ D+ S+G+GFV F QE A AI +NG L N ++ G K
Sbjct: 160 LSCKVISDENG--SKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFV---------GRFK 208
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----A 275
+ +S EL D YT +Y+ N + L F
Sbjct: 209 SRRERES--ELGVKAKD---------------YTNIYIKNFGENMDDQRLTEIFAKYGPT 251
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
L V + D R KGFGFV + +H +A A+ N + L GK I K
Sbjct: 252 LSVKVMTD-DCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQK 302
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 231 TNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK 290
T G+S G S+ + N+P ++YVG+L +VT L+ F G I +RV RD
Sbjct: 27 TIGLSGG---SHGHSTPNSPT-ASLYVGDLHHDVTESMLYEKFSP--AGPILSIRVCRDS 80
Query: 291 ------GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G+ +V + A + N ++ G PI+ W +
Sbjct: 81 VTQHSLGYAYVNFQHRAHAEWVLATMNLDVIKGNPIRIMWSQR 123
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 142/308 (46%), Gaps = 43/308 (13%)
Query: 32 PILSGNLPPRFDASTC--RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKS 85
P S NLPP+ S+ S+YVG + P VT A++ E+F+ GP+ ++ + +
Sbjct: 27 PTPSYNLPPQTSISSAPSASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSL 86
Query: 86 SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSP 142
Y +V+Y + A+ LN I G+P ++ W SQR+ +G N+F+ +L
Sbjct: 87 GYAYVNYLNTADGERALEQLNYSLIKGRPCRIMW----SQRDPALRKTGQGNIFIKNLDE 142
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
++ + L F F +V D++ GRS+G+GFV + E A++AI +NG L ++
Sbjct: 143 QIDNKALHDTFVAFGNVLSCKVATDEQ-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDK 201
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
++ I + +S D E Q+T +Y+ NL +
Sbjct: 202 KVYVGPH------------------------IPRKERQSKLD--EMKAQFTNLYIKNLDT 235
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQ---RDKGFGFVRYSTHPEAALAIQMGNARILCGKP 319
EVT + F+ T V+V R KGFGFV Y +H EA A+ + L GK
Sbjct: 236 EVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKK 295
Query: 320 IKCSWGSK 327
+ + K
Sbjct: 296 LYVTRAQK 303
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 32/292 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDRRSAALAIVTL 105
++++ N+ Q+ N L + F + G + CK+ ++ YGFV Y +A AI +
Sbjct: 134 NIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAV 193
Query: 106 NGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + + + V +R ++ F N+++ +L EVT F+ + + +
Sbjct: 194 NGMLLNDKKVYVGPHIPRKERQSKLDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVT 253
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A V D + GRS+GFGFV++ + E+AQ+A+++L+ L +++ A K A +E +
Sbjct: 254 SAIVQVDDE-GRSKGFGFVNYESHEEAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELR 312
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S ++ +E + Q +YV NL +V L F GT
Sbjct: 313 RSYEQAKMEKLSKY----------------QGVNLYVKNLEDDVDDDKLRAEFEPF--GT 354
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +V D KGFGFV +S+ EA AI N +++ KP+ S +
Sbjct: 355 ITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYVSLAQR 406
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 104 KTIWVGDLHYWMDENYLHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 163
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G HI QP ++NWA S +R D + ++FVGDL+ +V DATL FS +
Sbjct: 164 GFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDATLLEIFSSRYS 222
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R A + ++
Sbjct: 223 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTHAMTEMNGVYCSTRPMRIGPATPRKSSGN 282
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S ++S +LTN TTV+VG L V+ DL + F
Sbjct: 283 SGSTGSSARSDGDLTN--------------------TTVFVGGLDPNVSEDDLRQSFSQY 322
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++ A A+Q N + + ++ SWG P
Sbjct: 323 --GEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNP 372
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 23/186 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D ++ S++VG++ V +A L E+FSS ++G K++ + YGFV + D
Sbjct: 190 RSDIASDHSIFVGDLASDVNDATLLEIFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 249
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------YASSQREDTSGHFNVFVGDLSPE 143
A+ +NG + +P+++ A +S++ + + VFVG L P
Sbjct: 250 SEKTHAMTEMNGVYCSTRPMRIGPATPRKSSGNSGSTGSSARSDGDLTNTTVFVGGLDPN 309
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 310 VSEDDLRQSFSQYGEISSVKIPVGKQCG------FVQFLQRKNAEDALQGLNGSTIGKQT 363
Query: 204 IRCNWA 209
+R +W
Sbjct: 364 VRLSWG 369
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
T +V+VG + P V+ L++ FS G + K+ + GFV + R++A A+ L
Sbjct: 297 TNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQC--GFVQFLQRKNAEDALQGL 354
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSGHFN 134
NG I Q ++++W + ++ S + N
Sbjct: 355 NGSTIGKQTVRLSWGRNPANKQLRSDNGN 383
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S +V++ N+ + N + + FS+ G + CK+ + +K + YGFV +
Sbjct: 82 PSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEE 141
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFA 151
SA +I +NG + G+ + V +RE G NV+V + E+ D TL
Sbjct: 142 SANTSIEKVNGMLLNGKKVYVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLKE 201
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F + T + RVM K G+SRGFGFV+F N E A+ A+ +LNGK LG +I
Sbjct: 202 MFEKYGTITSHRVMI--KDGKSRGFGFVAFENPESAEHAVQELNGKELGEGKI---LYVG 256
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV--YVGNLSSEVTSVDL 269
A +E+Q + +L E +Y V YV NL + L
Sbjct: 257 RAQKKNERQMELKRRFEQLK--------------MERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 270 HRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ F GTI +V R KGFGFV +S EA A+ N RI+ KP+ +
Sbjct: 303 RKEFSPF--GTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 326 SK 327
+
Sbjct: 361 QR 362
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 128/278 (46%), Gaps = 44/278 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H +T A+L E FSS GP + C+ ++ + Y +V++ A A+ T
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + ++ FS F
Sbjct: 63 MNFDLIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 118
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+K G S+G+GFV F +E A ++I +NG L +++
Sbjct: 119 CKVAQDEK-GNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYV--------------- 162
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
G +++ ++ E +T VYV N E+ L F GTI
Sbjct: 163 -----------GRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLKEMFEKY--GTI 209
Query: 282 EDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARIL 315
RV + +GFGFV + A A+Q N + L
Sbjct: 210 TSHRVMIKDGKSRGFGFVAFENPESAEHAVQELNGKEL 247
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +++T L F + L + DV +R G+ +V + +A A+
Sbjct: 3 SLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 63 MNFDLIKGRPIRIMWSQR 80
>gi|45872602|gb|AAH68194.1| Tial1 protein [Mus musculus]
Length = 269
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 14/185 (7%)
Query: 143 EVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNR 202
E+T + + F+ F SDARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG R
Sbjct: 1 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 60
Query: 203 QIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSS 262
QIR NWA + + Q +++K + ++ N+ +P+N TVY G ++S
Sbjct: 61 QIRTNWATRKPPAPKSTQETNTKQL--------RFEDVVNQSSPKN----CTVYCGGIAS 108
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+T + + F G I ++RV +KG+ FVR+STH AA AI N + G +KC
Sbjct: 109 GLTDQLMRQTFSPF--GQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKC 166
Query: 323 SWGSK 327
WG +
Sbjct: 167 YWGKE 171
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 58 QVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQ 113
++T ++ F+ G + +++K YGFV ++++ A AIV + G+ + G+
Sbjct: 1 EITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGR 60
Query: 114 PIKVNWAY------ASSQREDTS-------------GHFNVFVGDLSPEVTDATLFACFS 154
I+ NWA S+Q +T + V+ G ++ +TD + FS
Sbjct: 61 QIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFS 120
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F + RV +G+ FV F E A AI +NG + ++C W +
Sbjct: 121 PFGQIMEIRVF------PEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKE 171
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+VY G I +T+ L+++ FS G + ++ + Y FV + SAA AIV++NG
Sbjct: 100 TVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPE--KGYSFVRFSTHESAAHAIVSVNGT 157
Query: 109 HIFGQPIKVNWAYAS 123
I G +K W S
Sbjct: 158 TIEGHVVKCYWGKES 172
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 33/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV+++ SA A+
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
G H+ +P K+NWA S +R + + +++FVGDL+ +VTD L F+ +
Sbjct: 164 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYR 222
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR G
Sbjct: 223 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRI---------GP 273
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + TVYVG L V+ +L + F
Sbjct: 274 ATPRRSSGDSGSSTPGHSDGDSTNR-----------TVYVGGLDPNVSEDELRKAFAKY- 321
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV++ + +A A+Q N ++ + ++ SWG P+
Sbjct: 322 -GDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPS 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+F++ ++G K+I + YGFV + D
Sbjct: 190 RSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 249
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 250 NDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNV 309
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ GFV F ++ DA+ A+ LNG +G + +
Sbjct: 310 SEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGLNGSVIGKQAV 363
Query: 205 RCNWA 209
R +W
Sbjct: 364 RLSWG 368
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST R+VYVG + P V+ L++ F+ G + K+ + GFV + R A A+
Sbjct: 295 STNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC--GFVQFVSRTDAEEALQG 352
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 353 LNGSVIGKQAVRLSWGRSPSHKQ 375
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 33/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV+++ SA A+
Sbjct: 104 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 163
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
G H+ +P K+NWA S +R + + +++FVGDL+ +VTD L F+ +
Sbjct: 164 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYR 222
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR G
Sbjct: 223 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRI---------GP 273
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + TVYVG L V+ +L + F
Sbjct: 274 ATPRRSSGDSGSSTPGHSDGDSTNR-----------TVYVGGLDPNVSEDELRKAFAKY- 321
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV++ + +A A+Q N ++ + ++ SWG P+
Sbjct: 322 -GDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPS 372
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+F++ ++G K+I + YGFV + D
Sbjct: 190 RSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 249
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 250 NDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNV 309
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ GFV F ++ DA+ A+ LNG +G + +
Sbjct: 310 SEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGLNGSVIGKQAV 363
Query: 205 RCNWA 209
R +W
Sbjct: 364 RLSWG 368
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST R+VYVG + P V+ L++ F+ G + K+ + GFV + R A A+
Sbjct: 295 STNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC--GFVQFVSRTDAEEALQG 352
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 353 LNGSVIGKQAVRLSWGRSPSHKQ 375
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D G+S+GFGFVSF EDAQ A++D+NGK L RQ+ A K
Sbjct: 211 FSKYGPALSIRVMTDD-GGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E+ +D Q +YV NL + L +
Sbjct: 270 G---------------ERQNELKRKFEQMKQDR-MTRYQGVNLYVKNLDDGLDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPLRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ L F G
Sbjct: 182 ELGARAREFTN----------------------VYIKNFGEDMDDEKLKELFSKY--GPA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+RV D KGFGFV + H +A A+ N + L G+ + K
Sbjct: 218 LSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 268
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 78 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEA 137
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 138 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 197
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D +G+S+GFGFVSF EDAQ A++D+NGK L RQ+ A K
Sbjct: 198 FSKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKK 256
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E+ +D Q +YV NL + L +
Sbjct: 257 G---------------ERQNELKRKFEQMKQDR-MTRYQGVNLYVKNLDDGLDDERLRKE 300
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 301 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 357
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 46/275 (16%)
Query: 65 QEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA 120
Q+ FS GP+ + +I + Y +V++ A A+ T+N I G+P+++ W
Sbjct: 15 QQDFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPLRIMW- 73
Query: 121 YASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
SQR+ + SG N+F+ +L + + L+ FS F +V+ D+ S+G+G
Sbjct: 74 ---SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYG 128
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG 237
FV F E A+ AI +NG L +R++ S E+++ E TN
Sbjct: 129 FVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAELGARAREFTN----- 179
Query: 238 QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGF 292
VY+ N ++ L F G +RV D KGF
Sbjct: 180 -----------------VYIKNFGEDMDDEKLKELFSKY--GPALSIRVMTDDSGKSKGF 220
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GFV + H +A A+ N + L G+ + K
Sbjct: 221 GFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQK 255
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 136/295 (46%), Gaps = 21/295 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA +T
Sbjct: 66 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FTTPAAAAKALT 124
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
L+G I + K+NWA A RE+ F++FVGDL PEV + L + F S FP
Sbjct: 125 LSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFP 184
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 185 SCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 244
Query: 218 EKQSSDSKSVVELTNGIS--DGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLH 270
+ G AP+ +P TTV+VG LS VT +L
Sbjct: 245 AGPGAMGMPGAGPAGMYPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELR 304
Query: 271 RHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 305 SFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 357
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 34/306 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + + L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEE 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + R+ G NV++ +L ++ D L
Sbjct: 151 AERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQGL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D+ +G+S+GFGFVSF EDA+ A++++NGK L +QI A K
Sbjct: 211 FSKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV-------YVGNLSSEVT 265
E+Q+ EL + GQ K ++ E PQ +V YV NL +
Sbjct: 270 V----ERQT-------ELKHKF--GQMKQDKHKVEQVPQDISVRCQGVNLYVKNLDDGID 316
Query: 266 SVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L + F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 317 DERLRKEFSPF--GTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 374
Query: 322 CSWGSK 327
+ +
Sbjct: 375 VALAQR 380
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
S+YVG++HP VT A+L E FSS GP+ + + +D+++ Y V++ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIR-VYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
T+N I G+P+++ W SQR+ + SG N+FV +L + L+ FS F
Sbjct: 71 TMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFGNIL 126
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+V+ D+ S+G+GFV F QE+A+ AI +NG +L +R++ + + + D +
Sbjct: 127 SCKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKV---FVGRFKSRRDRQA 181
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----AL 276
+++ ++T VY+ NL ++ L F AL
Sbjct: 182 ELGARA-----------------------KEFTNVYIKNLGEDMDDERLQGLFSKFGPAL 218
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQK 268
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 10/88 (11%)
Query: 248 NNPQYT--TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYST 299
++P Y+ ++YVG+L +VT L+ F + G I +RV RD+ G+ V +
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSS--AGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 33/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV+++ SA A+
Sbjct: 65 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFYSHGSAEKALQ 124
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
G H+ +P K+NWA S +R + + +++FVGDL+ +VTD L F+ +
Sbjct: 125 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDYSIFVGDLAADVTDEMLMELFANKYR 183
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR G
Sbjct: 184 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMTEMNGAYCSTRPIRI---------GP 234
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + TVYVG L V+ +L + F
Sbjct: 235 ATPRRSSGDSGSSTPGHSDGDSTNR-----------TVYVGGLDPNVSEDELRKAFAKY- 282
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV++ + +A A+Q N ++ + ++ SWG P+
Sbjct: 283 -GDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVIGKQAVRLSWGRSPS 333
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+F++ ++G K+I + YGFV + D
Sbjct: 151 RSEVASDYSIFVGDLAADVTDEMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 210
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 211 NDKSHAMTEMNGAYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSTNRTVYVGGLDPNV 270
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ GFV F ++ DA+ A+ LNG +G + +
Sbjct: 271 SEDELRKAFAKYGDVASVKIPLGKQC------GFVQFVSRTDAEEALQGLNGSVIGKQAV 324
Query: 205 RCNWA 209
R +W
Sbjct: 325 RLSWG 329
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
ST R+VYVG + P V+ L++ F+ G + K+ + GFV + R A A+
Sbjct: 256 STNRTVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQC--GFVQFVSRTDAEEALQG 313
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 314 LNGSVIGKQAVRLSWGRSPSHKQ 336
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 133/282 (47%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A LA+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F +E AQ AI+ +NG L NR++ + S E+++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSH----FKSRQEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN VYV NL ++ L F G
Sbjct: 182 ELGVRAMEFTN----------------------VYVKNLQMDIDEQGLEELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD +GFGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQ 259
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 138/297 (46%), Gaps = 23/297 (7%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ D S +GFV + R +
Sbjct: 91 PGLRKSGVGNIFIKNLEESIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETREA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V+ + +RE G NV+V +L ++ + L
Sbjct: 151 AQQAISTMNGMLLNNRKVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ D+NGK + + + A K
Sbjct: 211 FSQFGKTLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQKW 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+Q+ + ++ D N+ Q +YV NL + + L +
Sbjct: 270 A----ERQNELKRKFQQMKQMKQDRL---------NHYQGVNLYVKNLDDSIDNERLRKE 316
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N IL KP+ + +
Sbjct: 317 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGCILGTKPLYVALAQR 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++VGDL P+VT+A L+ FS+ RV D T RS G+ +++F+ DA+ A++
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALDT 71
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+N + + + IR W+ + G KS
Sbjct: 72 MNFEVIKGQPIRIMWSQR-----------------------DPGLRKSG---------VG 99
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQM 309
+++ NL + + L+ F G I +V D +GFGFV + T A AI
Sbjct: 100 NIFIKNLEESIDNKALYDTFSTF--GNILSCKVVCDDHGSRGFGFVHFETREAAQQAIST 157
Query: 310 GNARILCGKPIKCS 323
N +L + + S
Sbjct: 158 MNGMLLNNRKVFVS 171
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A LA+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 72 MNFEVIKGQPIRIMWSQR 89
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 143/291 (49%), Gaps = 20/291 (6%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAI 102
++++VG++ + L FS TG L K+I+ + YGF+++ R +A +
Sbjct: 91 VKTLWVGDLQFWMDEGYLHTCFSHTGELVSAKIIRNKYTGQSEGYGFMEFITRTAAEKIM 150
Query: 103 VTLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
T NG + Q ++NWA S +R D F++FVGDL +V+D L F S +
Sbjct: 151 QTYNGTLMPNTEQVFRMNWATFSMGERRLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYS 210
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F + + A+ ++NG + R +R + A ++G
Sbjct: 211 SVKAAKVVMDANTGRSKGYGFVRFGEESERARAMTEMNGVYCSTRPMRISAATPRKSAGV 270
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q S NG S Q +++ N TT++VG L T DL + F
Sbjct: 271 QHQYSGRAG-----NGGSHAQGFPSDNDLNN----TTIFVGRLDPNATDEDLRQVFGQY- 320
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ KG GFV++ A A+Q + ++ + ++ SWG P
Sbjct: 321 -GELVSVKIPVGKGCGFVQFGNRASAEEALQRLHGTVIRQQTVRLSWGRSP 370
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 33/196 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V++ +LQE F S ++ K++ + YGFV + +
Sbjct: 178 RLDGGPDFSIFVGDLDSDVSDLVLQETFQSRYSSVKAAKVVMDANTGRSKGYGFVRFGEE 237
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA---------YASSQREDTSG-------------HF 133
A A+ +NG + +P++++ A + S R G +
Sbjct: 238 SERARAMTEMNGVYCSTRPMRISAATPRKSAGVQHQYSGRAGNGGSHAQGFPSDNDLNNT 297
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+FVG L P TD L F + ++ +G GFV F N+ A+ A+
Sbjct: 298 TIFVGRLDPNATDEDLRQVFGQYGELVSVKIP------VGKGCGFVQFGNRASAEEALQR 351
Query: 194 LNGKWLGNRQIRCNWA 209
L+G + + +R +W
Sbjct: 352 LHGTVIRQQTVRLSWG 367
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 135/293 (46%), Gaps = 19/293 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ S Y FVD F +AA ++
Sbjct: 65 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAAAAKALS 123
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
LNG + + K+NWA A R+D +++FVGDL PEV + L + F S FP
Sbjct: 124 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 183
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 184 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 243
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLHRH 272
AP+ +P TTV+VG LS VT +L
Sbjct: 244 VVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 303
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 304 FQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 354
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 139/275 (50%), Gaps = 28/275 (10%)
Query: 64 LQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHI--FGQPIKV 117
++ F+ +G L K+I+ ++ YGF+++ +A + T N + Q ++
Sbjct: 6 IRTCFAQSGELVNVKIIRNKQTMQSECYGFIEFSTHAAAERILQTYNNTLMPNVEQNYRL 65
Query: 118 NWAYASS--QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSR 174
NWA+ S +R + + + +FVGDL+P+VTD TL F V +P+ A+V+ D+ T RS+
Sbjct: 66 NWAFYGSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSK 125
Query: 175 GFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGI 234
G+GFV F ++ + A++++NG R +R AA +K V T
Sbjct: 126 GYGFVRFGDESEQARAMSEMNGMMCLGRAMRIGAAA-------------NKKSVGGTASY 172
Query: 235 SDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGF 294
+ Q N+ P N TT++VGNL S VT L + F G + V++ K GF
Sbjct: 173 QNNQGTPNDSDPSN----TTIFVGNLDSNVTDEHLRQTFSPY--GELVHVKIPAGKQCGF 226
Query: 295 VRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
V+++ A A+++ N L G+ ++ SWG P
Sbjct: 227 VQFTNRSSAEEALRVLNGMQLGGRNVRLSWGRSPN 261
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 36 GNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFV 90
G+ R + ++ +++VG++ P VT+ LQE F P ++G K++ +S YGFV
Sbjct: 71 GSGEKRGEDASDYTIFVGDLAPDVTDYTLQETFRVRYPSVKGAKVVIDRLTSRSKGYGFV 130
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN--------------VF 136
+ D A A+ +NG G+ +++ A T+ + N +F
Sbjct: 131 RFGDESEQARAMSEMNGMMCLGRAMRIGAAANKKSVGGTASYQNNQGTPNDSDPSNTTIF 190
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
VG+L VTD L FS + ++ ++ GFV F N+ A+ A+ LNG
Sbjct: 191 VGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC------GFVQFTNRSSAEEALRVLNG 244
Query: 197 KWLGNRQIRCNWA 209
LG R +R +W
Sbjct: 245 MQLGGRNVRLSWG 257
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VGN+ VT+ L++ FS G L K+ + GFV + +R SA A+ LNG
Sbjct: 188 TIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQC--GFVQFTNRSSAEEALRVLNGM 245
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ G+ ++++W + + R+
Sbjct: 246 QLGGRNVRLSWGRSPNNRQ 264
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/327 (29%), Positives = 154/327 (47%), Gaps = 30/327 (9%)
Query: 24 LLAAPQIEPILSGNLPPRFDAST--------CRSVYVGNIHPQVTNALLQEVFSSTGPLE 75
+ AP P ++G+ P F + + +++++G + P + ++ VFS+T
Sbjct: 9 VTGAPGNGPNVNGSGDPGFASPSQMPAPSEAAKTLWMGEMEPWMDENFIKNVFSNTSAEN 68
Query: 76 GCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFG--QPIKVNWAYASS---QR 126
+ +D++S Y FV+ F AA + LNG + + K+NWA +R
Sbjct: 69 VQVKVIRDRNSGNAGYCFVE-FSTPEAAQKALALNGTPVPNSQRVFKLNWASGGGLVDRR 127
Query: 127 EDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
+D +++FVGDL PEV + L + F S FP+C A++M D TG+SRG+GFV F ++
Sbjct: 128 DDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDES 187
Query: 186 DAQSAINDLNGKWLGNRQIRCNWAAKGA----TSGDEKQSSDSKSVVELTNGISDGQEKS 241
D Q A+ ++ G + GNR +R + A Q+ V G +
Sbjct: 188 DQQRALVEMQGVYCGNRPMRISTATPKTRYMMPPVPGAQAPMWGGVPPY--GYAQPAAPF 245
Query: 242 NEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYS 298
N P N +P TTV+VG LS VT +L F G I V++ KG GFV++
Sbjct: 246 NPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFV 303
Query: 299 THPEAALAIQMGNARILCGKPIKCSWG 325
A +AI + ++ SWG
Sbjct: 304 HRHAAEMAINQMQGYPIGNSRVRLSWG 330
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 47/217 (21%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F S P I D + YGFV + D
Sbjct: 127 RDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDE 186
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQR---------------------EDTSGHFN 134
A+V + G + +P++++ A ++ + FN
Sbjct: 187 SDQQRALVEMQGVYCGNRPMRISTATPKTRYMMPPVPGAQAPMWGGVPPYGYAQPAAPFN 246
Query: 135 ---------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFV 179
VFVG LS VT+ L + F F + ++ +G GFV
Sbjct: 247 PMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP------PGKGCGFV 300
Query: 180 SFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
F ++ A+ AIN + G +GN ++R +W SG
Sbjct: 301 QFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 337
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 47/238 (19%)
Query: 135 VFVGDLSPEVTDATLFACFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++G++ P + + + FS +V+ D+ +G + G+ FV F E AQ A+
Sbjct: 43 LWMGEMEPWMDENFIKNVFSNTSAENVQVKVIRDRNSGNA-GYCFVEFSTPEAAQKAL-A 100
Query: 194 LNGKWLGNRQ--IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
LNG + N Q + NWA+ G G+ D ++ + P+
Sbjct: 101 LNGTPVPNSQRVFKLNWASGG--------------------GLVDRRD-------DRGPE 133
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHAL-----CVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
Y+ ++VG+L EV L F + + D + +G+GFVR+S + A
Sbjct: 134 YS-IFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDESDQQRA 192
Query: 307 -IQMGNARILCG-KPIKCSWGSKPTPPGTSSTPLPPPPAPHLPGFSATDLAAYERQIA 362
++M + CG +P++ S + T +PP P P + Y + A
Sbjct: 193 LVEM--QGVYCGNRPMRISTATPKT-----RYMMPPVPGAQAPMWGGVPPYGYAQPAA 243
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 32/300 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRR 96
P S ++++ N+ + + L E FS+ GP+ CK+ YGFV Y
Sbjct: 119 PSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDE 178
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH----FNVFVGDLSPEVTDATLFAC 152
+A AI LNG + + + V QR D SG NV+V +LS ++D L
Sbjct: 179 AAQRAIDKLNGMLLNDKQVYVGPFVHKLQR-DPSGEKVKFTNVYVKNLSESLSDEELNKV 237
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F + +M D + G+S+GFGFV+F N +DA A++ LNGK +++ W
Sbjct: 238 FGEFGVTTSCVIMRDGE-GKSKGFGFVNFENSDDAARAVDALNGKTFDDKE----WFVGK 292
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+++ EL E+S ++A + + Q + +YV NL VT L H
Sbjct: 293 AQKKSERET-------ELKQKF----EQSLKEAADKS-QGSNLYVKNLDESVTDDKLREH 340
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V RD +G GFV +ST EA+ AI N +++ KP+ + +
Sbjct: 341 FAPF--GTITSCKVMRDPTGVSRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALAQR 398
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L E FS G + ++ + + YG+V+Y + A+ A+
Sbjct: 40 SLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNE 99
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN + G+ I+V ++ S R+ SG N+F+ +L + L FS F +
Sbjct: 100 LNFMALNGRAIRVMYSVRDPSLRK--SGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 157
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V D +G+S+G+GFV + E AQ AI+ LNG L ++Q+
Sbjct: 158 VAVD-PSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFV------------- 203
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
K D ++T VYV NLS ++ +L++ F V T
Sbjct: 204 ---------------HKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTT--S 246
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
+ RD KGFGFV + +AA A+ N + K
Sbjct: 247 CVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDK 286
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
G +++VGDL VTD+ LF FS RV D T RS G+G+V++ +DA A
Sbjct: 37 GTTSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRA 96
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNP 250
+N+LN L R IR ++ + S KS V
Sbjct: 97 LNELNFMALNGRAIRVMYSV--------RDPSLRKSGV---------------------- 126
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAAL 305
+++ NL + LH F A G I +V D KG+GFV+Y T A
Sbjct: 127 --GNIFIKNLDKSIDHKALHETFSAF--GPILSCKVAVDPSGQSKGYGFVQYDTDEAAQR 182
Query: 306 AIQMGNARILCGKPI 320
AI N +L K +
Sbjct: 183 AIDKLNGMLLNDKQV 197
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS---SYGFVDYFDRRSAA 99
D S ++YV N+ VT+ L+E F+ G + CK+++ GFV + A+
Sbjct: 316 DKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGVSRGSGFVAFSTPEEAS 375
Query: 100 LAIVTLNGRHIFGQPIKVNWAYASSQRE 127
AI +NG+ I +P+ V A R+
Sbjct: 376 RAITEMNGKMIVTKPLYVALAQRKEDRK 403
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L + VT L F + V D+ +R G+G+V Y+T +A+ A+
Sbjct: 39 TSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 98
Query: 309 MGNARILCGKPIKCSW 324
N L G+ I+ +
Sbjct: 99 ELNFMALNGRAIRVMY 114
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++H VT ALL E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L + ++ S E++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGH----FKSRREREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL ++V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLQADVDEQGLQELFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + TH EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDSSGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQK 268
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + V + +RE G N++V +L +V + L
Sbjct: 151 AQHAINTMNGMLLNDHKVFVGHFKSRREREVELGARAMEFTNIYVKNLQADVDEQGLQEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-SSGHSRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D N Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDR-MNRYQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F + T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 144/324 (44%), Gaps = 36/324 (11%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDY 92
+ G L P D + RSV+ G + QV ++++ FS + + Y FVD
Sbjct: 74 LWMGELEPWIDENFVRSVWFGMGY-QVNVKMIRDKFSGS------------NAGYCFVD- 119
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTD 146
F+ A + LNG+ I + K+NWA A R+D F++FVGDL PEV +
Sbjct: 120 FENPDQATRALQLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEFSIFVGDLGPEVNE 179
Query: 147 ATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L + F + +C A++M D +G SRG+GFV F +++D Q A++++ G + GNR +R
Sbjct: 180 YVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEQDQQKALHEMQGVYCGNRPMR 239
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-------------NNPQY 252
+ A SG G + + AP +P
Sbjct: 240 ISTATPKNKSGAGGPGGMPGMGPPGGPGGNPNMGMYSMGAPPMGYYGAPQPMNQFTDPNN 299
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 300 TTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQG 357
Query: 313 RILCGKPIKCSWGSKPTPPGTSST 336
+ ++ SWG G + T
Sbjct: 358 YPIGNSRVRLSWGRSQNNSGPAGT 381
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ NI + N L + FS+ G + CK++ ++ S YGFV + + +
Sbjct: 91 PALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N+++ + +TD L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEA 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F RVM D+K GRSRGFGFV++ + EDAQ A++++NGK + + I A K
Sbjct: 211 FSAFGKTLSVRVMRDEK-GRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q + +L +D + Q +YV NL + L +
Sbjct: 270 L----ERQGELKRKFDQL-----------KQDRIQRY-QGVNLYVKNLDDSIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEAGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 133/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L + FS GP+ + +I + Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG N+F+ ++ + + L+ FS F
Sbjct: 72 MNYDVIKGRPIRIMW----SQRDPALRKSGVGNIFIKNIDDSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D++ S+G+GFV F QE A AI +NG L +R++ S E++
Sbjct: 128 CKVVCDERG--SKGYGFVHFETQEAANRAIETMNGMLLNDRKVFVGH----FKSRKEREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V++ TN +Y+ N +T L F A G
Sbjct: 182 EFGTKVMKFTN----------------------IYIKNFGDNLTDEKLKEAFSAF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
VRV RD +GFGFV Y+ H +A A+ N + + GK I K
Sbjct: 218 LSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQK 268
>gi|15594035|emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 148/292 (50%), Gaps = 23/292 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++ + L+ F+ST + K+I+ ++ YGFV++F +A +
Sbjct: 117 RTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKVLQ 176
Query: 104 TLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
T + + QP ++NWA S +R + ++FVGDL+ +VTD L F+ +P+
Sbjct: 177 TYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKYPS 236
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V++D TGRS+G+GFV F + + A+ ++NG + +R +R A +SG +
Sbjct: 237 VKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQ 296
Query: 219 KQSSDSKSVVELTNGISDG--QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+Q S G S+G + S DA N TT++VG L V+ DL + F +
Sbjct: 297 QQYSSQ-------GGYSNGGPAQGSQPDADSTN---TTIFVGGLDPNVSDEDLRQPF--V 344
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ ++ +++ +A A+Q N + + ++ WG P
Sbjct: 345 QYGEIVSVKIPVEERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNP 396
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 156/322 (48%), Gaps = 34/322 (10%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS----Y 87
I G P + DA+ ++++G + P + ++ VF ++TG K+I+ DK+S Y
Sbjct: 43 IPGGQAPIQGDANK-NTLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGY 100
Query: 88 GFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSP 142
FV+ F AA + LNG + + K+NWA + +R+D +++FVGDL P
Sbjct: 101 CFVE-FTSSDAASKALQLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGP 159
Query: 143 EVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
EV + L + F FP+C A++M D +G+SRG+GFV F +++D Q A+ ++ G + GN
Sbjct: 160 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGN 219
Query: 202 RQIRCNWAA-KGATSGDEKQSSDSKSVVELT------NGI-SDGQEKSNEDAPEN----- 248
R +R + A K G + + L G+ S Q AP N
Sbjct: 220 RPMRISTATPKNRNHGPYQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQ 279
Query: 249 -----NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
+P TTV+VG LS VT +L F G I V++ KG GFV++ A
Sbjct: 280 MNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVQIPPGKGCGFVQFVHRHAA 337
Query: 304 ALAIQMGNARILCGKPIKCSWG 325
+AI + ++ SWG
Sbjct: 338 EMAINQMQGYPIGNSRVRLSWG 359
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 141/291 (48%), Gaps = 30/291 (10%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
RS+++G++ P + FS TG + K+I+ ++ YGF++ R +A +
Sbjct: 75 RSLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQ 134
Query: 104 TLNGRHIFG--QPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
T NG + Q ++NWA A +R D + + +FVGDL+ +VTD L F +P+
Sbjct: 135 TYNGTLMPNSEQNFRLNWATLGAGERRADDTPDYTIFVGDLASDVTDYVLQETFRGHYPS 194
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A+V+ D+ TGRS+G+GFV F ++ + A+N++NG + R +R AA G
Sbjct: 195 VKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRAMNEMNGMFCSTRPMRIGPAATKKPVGAS 254
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
Q++ E++P TT++VG L S VT L + F
Sbjct: 255 FQNTQGXQ-------------------GESDPNNTTIFVGGLDSNVTDDYLRQVFSQY-- 293
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+ N L + I+ SWG P+
Sbjct: 294 GELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWGRSPS 344
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
++++GDL P + + + CFS +V+ +++TG+ G+GF+ + A+ +
Sbjct: 76 SLWIGDLQPWMEENYXWGCFSQTGEVVSVKVIRNKQTGQCEGYGFIELATRAAAERILQT 135
Query: 194 LNGKWLGNRQ--IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQ 251
NG + N + R NWA GA E+ +D P+
Sbjct: 136 YNGTLMPNSEQNFRLNWATLGAG------------------------ERRADDTPD---- 167
Query: 252 YTTVYVGNLSSEVTSVDLHRHFHA-----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALA 306
T++VG+L+S+VT L F + D R KG+GFVR+ E A
Sbjct: 168 -YTIFVGDLASDVTDYVLQETFRGHYPSVKGAKVVTDRTTGRSKGYGFVRFGDEGEQLRA 226
Query: 307 IQMGNARILCGKPIKCSWGSKPTPPGTS 334
+ N +P++ + P G S
Sbjct: 227 MNEMNGMFCSTRPMRIGPAATKKPVGAS 254
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + VT+ L++VFS G L K+ + GFV + +R A A+ LNG
Sbjct: 271 TIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRC--GFVQFANRACAEQALAGLNGT 328
Query: 109 HIFGQPIKVNWAYASSQRE 127
+ Q I+++W + S ++
Sbjct: 329 QLGAQSIRLSWGRSPSNKQ 347
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGSRGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D TGRSRGFGFV++ N E+AQ A++++NGK + R I A K
Sbjct: 211 FSAFGNTLSVKVMMDD-TGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q + ++ QE+ N Q +YV NL + L +
Sbjct: 270 I----ERQGELKRKFEQIK------QERINRY------QGVNLYVKNLDDGIDDDRLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ I +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F QE A AI +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH----FKSRREREL 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V+E TN VY+ N ++ L F A G
Sbjct: 182 EYGAKVMEFTN----------------------VYIKNFGEDMDDKRLREIFSAF--GNT 217
Query: 282 EDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V R +GFGFV Y H EA A+ N + + G+ I K
Sbjct: 218 LSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQK 268
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 134/291 (46%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ+AI+ +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH----FKSRREREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQRLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N R + G+ + K
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQK 268
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ ++NG+ + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDR-LTRYQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
+N +FG+PI+VN A + D N+F+G+L P+V + L FS F ++
Sbjct: 85 IMNMIKLFGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLHDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGF+S+ + + + +AI +NG++L NRQI ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLCNRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ V+ +N
Sbjct: 202 PAERVLAASN 211
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI +N
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIMN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MIKLFGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V LH F A V + + ++ RD +GFGF+ Y + + AI+
Sbjct: 115 FIGNLDPDVDEKLLHDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC + I S+ K
Sbjct: 174 MNGQYLCNRQITVSYAYK 191
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 133/292 (45%), Gaps = 21/292 (7%)
Query: 52 VGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNG 107
+G + P + ++ ++ G K+I+ S Y FVD F +AA +TL+G
Sbjct: 93 MGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FTTPAAAAKALTLSG 151
Query: 108 RHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCS 160
I + K+NWA A RE+ F++FVGDL PEV + L + F S FP+C
Sbjct: 152 TPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNEYVLVSLFQSRFPSCK 211
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 212 SAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMRISTATPKNKGAGAGP 271
Query: 221 SSDSKSVVELTNGIS--DGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLHRHF 273
+ G AP+ +P TTV+VG LS VT +L F
Sbjct: 272 GAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFF 331
Query: 274 HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 332 QGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 381
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 128/282 (45%), Gaps = 31/282 (10%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK--------KDKSSYGFVDYFDRRSAALA 101
+YVGN+ +VT+ ++ + + P K++ + Y FV + D SA +
Sbjct: 14 LYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDNISAMQS 73
Query: 102 IVTLNGRHIFGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
+ LNGR G+ +KVNWA S + +++ G+L + + L A F VF
Sbjct: 74 MNFLNGREFCGKKVKVNWATNSPNGMPKVIGTSVSIYCGNLDDTIDEEDLKAAFEVFGEI 133
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
+ +V+ D T S+ F+SF N+ DA+ AI +++G L R I+ NWA + E+
Sbjct: 134 LNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIREMHGAMLKTRAIKTNWATRNQNQKKEE 193
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
Q D E+ G S TTVY G + S T + HF G
Sbjct: 194 QDYD-----EVYKGAS--------------ADNTTVYAGGIPSNCTEEQIRSHFDDY--G 232
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
I DVR+ K + F+++ TH AA AI N L G +K
Sbjct: 233 KIVDVRIFAAKNYAFIKFDTHANAATAICKSNGTELVGSCLK 274
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 22/170 (12%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALA 101
T S+Y GN+ + L+ F G + K+++ +++ F+ + ++ A A
Sbjct: 105 TSVSIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKA 164
Query: 102 IVTLNGRHIFGQPIKVNWA------------YASSQREDTSGHFNVFVGDLSPEVTDATL 149
I ++G + + IK NWA Y + ++ + V+ G + T+ +
Sbjct: 165 IREMHGAMLKTRAIKTNWATRNQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEEQI 224
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
+ F + D R+ ++ + F+ F +A +AI NG L
Sbjct: 225 RSHFDDYGKIVDVRIF------AAKNYAFIKFDTHANAATAICKSNGTEL 268
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 135/290 (46%), Gaps = 40/290 (13%)
Query: 38 LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYF 93
+ P A S+YVG++HP VT A+L E+FS G + C+ + +S Y ++++
Sbjct: 64 MDPGGQACALSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQ 123
Query: 94 DRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
A A+ T+N I GQPI++ W++ SG N+F+ +L + + L+ F
Sbjct: 124 QPADAERALDTMNFEMIKGQPIRIMWSHRDPGLRK-SGMGNIFIKNLENSIDNKALYDTF 182
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F + ++V++++ SRGFGFV F E AQ AIN +NG L +R++
Sbjct: 183 STFGSILSSKVVYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------- 233
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
G ++K + +T VYV NL ++ L F
Sbjct: 234 -------------------GHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDLF 274
Query: 274 HALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
G ++ V+V RD +GFGFV + H EA A+ N + + G+
Sbjct: 275 SQF--GKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQ 322
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 140/304 (46%), Gaps = 26/304 (8%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ + P S ++++ N+ + N L + FS+ G + K++ + S +GFV
Sbjct: 147 IMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFV 206
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVT 145
+ +A AI T+NG + + + V + +RE G NV+V +L ++
Sbjct: 207 HFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNVYVKNLHMDMD 266
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F +VM D G+SRGFGFV+F E+AQ A++ +NGK + + +
Sbjct: 267 EQGLQDLFSQFGKMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLY 325
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K A E+QS + ++ QE+ +N Q +YV NL +
Sbjct: 326 VGRAQKRA----ERQSELKRRFEQVK------QER------QNRYQGVNLYVKNLDDSIN 369
Query: 266 SVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F A V T V + KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 370 DERLKEVFSAYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 429
Query: 324 WGSK 327
+
Sbjct: 430 LAQR 433
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
+++YVG+L +VT L+ F +GTI +RV RD G+ ++ + +A A
Sbjct: 74 SSLYVGDLHPDVTEAMLYEMFSP--IGTILSIRVCRDVATRRSLGYAYINFQQPADAERA 131
Query: 307 IQMGNARILCGKPIKCSWGSK 327
+ N ++ G+PI+ W +
Sbjct: 132 LDTMNFEMIKGQPIRIMWSHR 152
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L+EVFS+ G + K++ + S +GFV + A A+ +N
Sbjct: 358 NLYVKNLDDSINDERLKEVFSAYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 417
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 418 GRIVGTKPLYVALAQRKEERK 438
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ATRAIETMNGMLLNDRKVFVGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D GRS+GFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSRFGKTLSVKVMMDN-NGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ N Q +YV NL + L +
Sbjct: 270 L----ERQSELKRKFEQMK------QERVNRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F E A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SRGYGFVHFETHEAATRAIETMNGMLLNDRKVFVGH----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN VY+ N ++ L F G
Sbjct: 182 EVGARAIEFTN----------------------VYIKNFGDDMDDDRLREIFSRF--GKT 217
Query: 282 EDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V R KGFGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMMDNNGRSKGFGFVNFEKHEEAQKAVADMNGKEINGR 259
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F + + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 72 MNFEVIKGRPIRIMWSQR 89
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGAALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGINDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGAALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 144/306 (47%), Gaps = 34/306 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + + L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEE 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + R+ G NV++ +L ++ D L
Sbjct: 151 AERAIEKMNGMFLNDRKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D+ +G+S+GFGFVSF EDA+ A++++NGK L +QI A K
Sbjct: 211 FSRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV-------YVGNLSSEVT 265
E+Q+ EL + GQ K ++ E PQ +V YV NL +
Sbjct: 270 V----ERQT-------ELKHKF--GQMKQDKPKIEQVPQDRSVRCQGVNLYVKNLDDGID 316
Query: 266 SVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L + F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 317 DERLRKEFSPF--GTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLY 374
Query: 322 CSWGSK 327
+ +
Sbjct: 375 VALAQR 380
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
S+YVG++HP VT A+L E FS GP+ + + +D+++ Y V++ A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIR-VYRDRTTRRSLGYASVNFQQLEDAERALD 70
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
T+N I G+P+++ W SQR+ + SG N+FV +L + TL+ FS F
Sbjct: 71 TMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNIL 126
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+V+ D+ S+G+GFV F QE+A+ AI +NG +L +R++ + + + D +
Sbjct: 127 SCKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFLNDRKV---FVGRFKSRRDRQA 181
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----AL 276
+++ ++T VY+ NL ++ L F AL
Sbjct: 182 ELGARA-----------------------KEFTNVYIKNLGEDMDDERLQDLFSRFGPAL 218
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 219 SVKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRAQK 268
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 248 NNPQYT--TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYST 299
++P Y+ ++YVG+L +VT L+ F G I +RV RD+ G+ V +
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 139/296 (46%), Gaps = 25/296 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA ++
Sbjct: 68 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAAAAKALS 126
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
LNG + + K+NWA A R+D +++FVGDL PEV + L + F + FP
Sbjct: 127 LNGTPMPNTNRVFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQNRFP 186
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-----AKG 212
+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R + A G
Sbjct: 187 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALTEMQGVYCGNRPMRISTATPKNKGPG 246
Query: 213 ATSGDEKQSSDSKSVVELTN---GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
G + + G + N+ NN TTV+VG LS VT +L
Sbjct: 247 VVPGAMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNN---TTVFVGGLSGYVTEDEL 303
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 304 RSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 357
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 129/278 (46%), Gaps = 45/278 (16%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALA 101
T S+YVG + P V+ ALL ++FS G + ++ I K Y +V++ D + A
Sbjct: 45 TSTSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQA 104
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
I LN I G+ ++ W SQR+ + GH N+F+ +L+ ++ + LF FSVF
Sbjct: 105 IEKLNYTPIKGKLCRIMW----SQRDPSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGN 160
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+++ D+ TG+S+GFGFV F + A AI+ LNG L ++I
Sbjct: 161 ILSSKIATDE-TGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYV------------ 207
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
LT D Q E +T VYV N+ E T + F +
Sbjct: 208 --------APHLTRKERDSQ------LEETKAHFTNVYVKNIDLETTDEEFKEFFGK--I 251
Query: 279 GTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGN 311
GT+ V ++R KGFGFV Y H +A A++ N
Sbjct: 252 GTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEELN 289
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 124/285 (43%), Gaps = 32/285 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N++ + N L + FS G + K+ + +GFV + + +A AI L
Sbjct: 136 NIFIKNLNQDIDNKALFDTFSVFGNILSSKIATDETGKSKGFGFVHFEEESAANEAIDAL 195
Query: 106 NGRHIFGQPIKV----NWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + GQ I V SQ E+T HF NV+V ++ E TD F T +
Sbjct: 196 NGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVT 255
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ G+ +GFGFV++ + DA A+ +LNG ++++ A K E+
Sbjct: 256 SV-ALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQKKY----ERI 310
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S K Q +S Q ++V NL + L F G
Sbjct: 311 QSLKK------------QYESTRLEKMAKYQGVNLFVKNLDDSIDDEKLQEEFAPF--GN 356
Query: 281 IEDVRVQR-----DKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
I V+V R KGFGFV +S+ EA AI N +I+ GKP+
Sbjct: 357 ITSVKVMRTENGKSKGFGFVCFSSPEEATKAITEKNQQIVAGKPL 401
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 243 EDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVR 296
+ A +N+ T++YVG L V+ L+ F +G++ +RV RD G+ +V
Sbjct: 37 QQAGDNDVTSTSLYVGELDPSVSEALLYDLFSP--IGSVASIRVCRDAITKTSLGYAYVN 94
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+S H AI+ N + GK + W +
Sbjct: 95 FSDHEAGKQAIEKLNYTPIKGKLCRIMWSQR 125
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 140/305 (45%), Gaps = 35/305 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++G + P + ++ ++ + G K+I+ + Y FVD+ +AA A+ L
Sbjct: 65 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFASPDAAAKAL-NL 123
Query: 106 NGRHI--FGQPIKVNWAYASSQ-------REDTSGHFNVFVGDLSPEVTDATLFACF-SV 155
NG+ I +P K+NWA R++ F++FVGDL PEVT+ L F +
Sbjct: 124 NGQLIPNSNRPFKLNWASGGGLADRRQVIRDERGPEFSIFVGDLGPEVTEFVLVQLFQNK 183
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+ A++M D +G SRG+GFV F ++ED Q A+ ++ G + GNR +R + A S
Sbjct: 184 YPSTKSAKIMSDPISGMSRGYGFVRFASEEDQQKALTEMQGVYCGNRPMRISTATPKNKS 243
Query: 216 ---------------GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNL 260
G S + N Q + P N TTV+VG L
Sbjct: 244 GGPGGPGGMGMPQGAGGPGMGMYSMGAPPMGNYYGAPQPMNQFTDPNN----TTVFVGGL 299
Query: 261 SSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
S VT +L F G I V++ KG GFV++ A +AI + +
Sbjct: 300 SGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRV 357
Query: 321 KCSWG 325
+ SWG
Sbjct: 358 RLSWG 362
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 109/189 (57%), Gaps = 8/189 (4%)
Query: 34 LSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YG 88
L+G +PP ++ + ++Y+GN+ +VT+ ++ E+F GP+ I KDK S YG
Sbjct: 5 LAGVVPPLYERNQEATIYIGNLDQKVTDDIVWELFIQCGPVVNVH-IPKDKISGEHQGYG 63
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDAT 148
FV++ A AI ++ ++G+PIKVN A + ++ N+F+G+L E+ + T
Sbjct: 64 FVEFKSEEDADYAIKIMHMIKLYGKPIKVNKASQDKRTQEVGA--NLFIGNLDTEIDEKT 121
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ FS F ++M + +TG S+G+GFVS+ N E + A+ +NG++LG + IR +
Sbjct: 122 LYETFSAFGHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALTAMNGQFLGTKIIRVEY 181
Query: 209 AAKGATSGD 217
A K G+
Sbjct: 182 AFKKDAKGE 190
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+++G+L +VTD ++ F + + D+ +G +G+GFV F+++EDA AI +
Sbjct: 21 IYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKIM 80
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
+ L + I+ N A+ Q+K ++ N
Sbjct: 81 HMIKLYGKPIKVNKAS---------------------------QDKRTQEVGAN------ 107
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +E+ L+ F A G I ++ R+ KG+GFV Y + A+
Sbjct: 108 LFIGNLDTEIDEKTLYETFSAF--GHILSTKIMRNPETGVSKGYGFVSYDNFESSDGALT 165
Query: 309 MGNARILCGKPIKCSWGSKPTPPG 332
N + L K I+ + K G
Sbjct: 166 AMNGQFLGTKIIRVEYAFKKDAKG 189
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T+Y+GNL +VT D+ C G + +V + +DK G+GFV + + +A
Sbjct: 17 QEATIYIGNLDQKVTD-DIVWELFIQC-GPVVNVHIPKDKISGEHQGYGFVEFKSEEDAD 74
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
AI++ + L GKPIK + S+
Sbjct: 75 YAIKIMHMIKLYGKPIKVNKASQ 97
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + E+ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D+ G+SRGFGFVSF EDAQ A++++NGK + + + A K
Sbjct: 211 FSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRMTRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS G + + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQP+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGQPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N E+ L F G
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGDEMDDEKLRELFSKY--GNA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
+RV D +GFGFV + H +A A+ N + + GK
Sbjct: 218 MSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGK 259
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+P++ W +
Sbjct: 72 MNFDVIKGQPVRIMWSQR 89
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 151/342 (44%), Gaps = 49/342 (14%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGF 89
++ N P S ++++ N+ + N L + FS+ G + CK+ D +GF
Sbjct: 110 VMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVATDDMGQSKGFGF 169
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTD 146
V Y A A+ +LNG I +P+ V +R+ D + NVFV +LS T
Sbjct: 170 VQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKARFNNVFVKNLSESTTK 229
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L FS + + A VM G+SR FGF++F + +DA A+ +LNGK + +++ C
Sbjct: 230 EDLVKIFSEYGNITSAVVMVG-TDGKSRCFGFINFESPDDAVRAVEELNGKKINDKEWYC 288
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
A K KS E+ + E+S +DA + Q +Y+ NL ++
Sbjct: 289 GRAQK-------------KSEREMD--LKRRFEQSMKDAADKY-QGQNLYLKNLDDGISD 332
Query: 267 VDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L F G I +V RD KG GFV +ST EA+ AI N ++L GKP+
Sbjct: 333 DQLRELFSTF--GKITSCKVMRDQNGVSKGSGFVAFSTREEASQAITEMNGKMLSGKPLY 390
Query: 322 CSWGSKP-------------------TPPGTSSTPLPPPPAP 344
++ + TP T P+ PP AP
Sbjct: 391 VAFAQRKEERKAMLQAQFSQMRPVPITPSMTPRLPMYPPMAP 432
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L E+FS G + C+ + +S Y +V++ + AA A+
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEM 97
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + +PI+V ++ SS+R SG N+F+ +L + + TL FS F
Sbjct: 98 LNFVPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHDTFSAFGAILSC 154
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D G+S+GFGFV + +E AQSA+ LNG + ++ + +
Sbjct: 155 KVATDD-MGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLR----------- 202
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
K D + ++ V+V NLS T DL + F T
Sbjct: 203 -----------------KQERDNSFDKARFNNVFVKNLSESTTKEDLVKIFSEYGNITSA 245
Query: 283 DVRVQRD---KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V V D + FGF+ + + +A A++ N + + K C K
Sbjct: 246 VVMVGTDGKSRCFGFINFESPDDAVRAVEELNGKKINDKEWYCGRAQK 293
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L + VT L+ F + V DV +R G+ +V +S +AA A++
Sbjct: 37 TSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE 96
Query: 309 MGNARILCGKPIKCSWGSK 327
M N L KPI+ + ++
Sbjct: 97 MLNFVPLNNKPIRVMYSNR 115
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 151/316 (47%), Gaps = 35/316 (11%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
R++++G++ + L+ +F+ TG + K+I+ ++ Y GF+++ +A +
Sbjct: 27 VRTLWIGDLQYWMDENYLRNLFAHTGEVLSAKVIRNKQTGYPEGYGFIEFNSHPAAERVL 86
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
+ NG + Q ++NWA +R D ++FVGDL+P+VTD L F FP
Sbjct: 87 LAYNGTQMPQTEQAFRLNWASFGMGEKRMDGGPELSIFVGDLAPDVTDYMLHETFRTRFP 146
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRS+G+GFV F ++ + A++++NG + +R +R + A
Sbjct: 147 SVRGAKVVIDAVTGRSKGYGFVRFADENERARAMSEMNGVYCSSRPMRISAATPKKAMAA 206
Query: 218 EKQSSDSKSVVELTNGISDGQE------------------------KSNEDAPENNPQYT 253
+ + ++V S + +S P+++P T
Sbjct: 207 GLTTVTAATIVPQPTIASPFKAATTTTTPTYQTMPYSITPPPSLSIQSQVLPPDSDPTNT 266
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR 313
T++VG L +T ++ + F +G + V++ KG FV+Y+ A A+Q +
Sbjct: 267 TIFVGGLDLNITEEEVKQTFSQ--IGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHGT 324
Query: 314 ILCGKPIKCSWGSKPT 329
++ + I+ SWG PT
Sbjct: 325 VIGQQAIRLSWGRSPT 340
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 22 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK 81
P + P I S LPP D T +++VG + +T +++ FS G L K+
Sbjct: 241 PYSITPPPSLSIQSQVLPPDSDP-TNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKI-- 297
Query: 82 KDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNW 119
FV Y R SA A+ L+G I Q I+++W
Sbjct: 298 PPGKGCAFVQYAQRNSAEDALQRLHGTVIGQQAIRLSW 335
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 134/293 (45%), Gaps = 19/293 (6%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
+V +G + P + ++ ++ G K+I+ S Y FVD F +AA ++
Sbjct: 89 NVRMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSPAAAAKALS 147
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
LNG + + K+NWA A R+D +++FVGDL PEV + L + F S FP
Sbjct: 148 LNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 207
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 208 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 267
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDLHRH 272
AP+ +P TTV+VG LS VT +L
Sbjct: 268 VVPGGMGMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSF 327
Query: 273 FHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 328 FQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 378
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + E+ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D+ G+SRGFGFVSF EDAQ A++++NGK + + + A K
Sbjct: 211 FSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRMTRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 126/282 (44%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS G + + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQP+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGQPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N E+ L F G
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGDEMDDEKLRELFSKY--GNA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
+RV D +GFGFV + H +A A+ N + + GK
Sbjct: 218 MSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGK 259
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+P++ W +
Sbjct: 72 MNFDVIKGQPVRIMWSQR 89
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 25/294 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H +T A+L E FSS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + ++ FS F
Sbjct: 72 MNFDMIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ +G S+G+GFV F +E A +I+ +NG L +++ + K + ++
Sbjct: 128 CKVAQDE-SGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKV---YVGKFIPRKEREKE 183
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPE----NNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
K+ + + + + K + + N Q +YV NL + L + F
Sbjct: 184 LGEKAKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERLRKEFTPF- 242
Query: 278 VGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GTI +V R KGFGFV +S EA A+ N RI+ KP+ + +
Sbjct: 243 -GTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQR 295
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 91/207 (43%), Gaps = 37/207 (17%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S +V++ N+ + N + + FS+ G + CK+ + + + YGFV +
Sbjct: 91 PSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFETEE 150
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH------------------------ 132
+A +I +NG + G+ + V +RE G
Sbjct: 151 AANKSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKI 210
Query: 133 --------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQ 184
N++V +L + D L F+ F T + A+VM ++ GRS+GFGFV F
Sbjct: 211 ERLNRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAKVMMEE--GRSKGFGFVCFSQP 268
Query: 185 EDAQSAINDLNGKWLGNRQIRCNWAAK 211
E+A A+ ++NG+ +G++ + A +
Sbjct: 269 EEATKAVTEMNGRIVGSKPLYVALAQR 295
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L +++T L F + L + D+ +R G+ +V + +A
Sbjct: 6 PNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ G+PI+ W +
Sbjct: 66 ERALDTMNFDMIKGRPIRIMWSQR 89
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 146/309 (47%), Gaps = 36/309 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++G + P + ++ VF ++TG K+I+ DK+S Y FV+ F AA +
Sbjct: 60 TLWMGELEPWMDENFIKGVFLTATGEPVNVKVIR-DKTSGNAGYCFVE-FSSSDAASKAL 117
Query: 104 TLNGRHI--FGQPIKVNWAYA---SSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
LNG + + K+NWA + +R+D +++FVGDL PEV + L + F FP
Sbjct: 118 GLNGTPVPNSNRAFKLNWASGGGINDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFP 177
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+C A++M D +G+SRG+GFV F +++D Q A+ ++ G + GNR +R + A S
Sbjct: 178 SCKSAKIMTDAMSGQSRGYGFVRFTDEQDQQRALVEMQGVYCGNRPMRISTATPKNRSNH 237
Query: 218 EKQSSDSKSVVELTNGI-----------SDGQEKSNEDAPEN----------NPQYTTVY 256
+ G+ S Q AP N +P TTV+
Sbjct: 238 GGPYQQHHGNQMMAPGLPPHQQGFYGVPSPAQYGGAYGAPYNPPGQQMNQFTDPNNTTVF 297
Query: 257 VGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILC 316
VG LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 298 VGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIG 355
Query: 317 GKPIKCSWG 325
++ SWG
Sbjct: 356 NSRVRLSWG 364
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 138/291 (47%), Gaps = 33/291 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
R+++VG++ + L F +G + K+I+ S YGFV+++ SA A+
Sbjct: 99 RTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQ 158
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFS-VFP 157
G H+ + K+NWA S +R + + ++FVGDL+ +VTD L F+ +
Sbjct: 159 NFAG-HVMPNTDRAFKLNWASYSVGEKRSELASDHSIFVGDLAVDVTDDMLMELFANKYR 217
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A+ ++NG + R IR A TSGD
Sbjct: 218 SVKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGD 277
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S +S +LTN TVYVG L V+ +L + F
Sbjct: 278 SGSSPPRQSDGDLTN--------------------RTVYVGGLDPNVSEDELRKTFAKY- 316
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G + V++ K GFV++ +A A+Q + + + ++ SWG P
Sbjct: 317 -GDVASVKIPVGKQCGFVQFVNRADAEEALQALSGSTIGKQAVRLSWGRSP 366
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+F++ ++G K+I + YGFV + D
Sbjct: 185 RSELASDHSIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 244
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY--------ASSQREDTSGHFN---VFVGDLSPEV 144
A+ +NG + +PI++ A SS + G V+VG L P V
Sbjct: 245 NDRTHAMTEMNGVYCSTRPIRIGPATPRRTSGDSGSSPPRQSDGDLTNRTVYVGGLDPNV 304
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ G FV F N+ DA+ A+ L+G +G + +
Sbjct: 305 SEDELRKTFAKYGDVASVKIPVGKQCG------FVQFVNRADAEEALQALSGSTIGKQAV 358
Query: 205 RCNWA 209
R +W
Sbjct: 359 RLSWG 363
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 39/215 (18%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VGDL + + L +CF +V+ ++ +G S G+GFV F + A+ A+ +
Sbjct: 101 IWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRHSGVSEGYGFVEFYSHASAEKALQNF 160
Query: 195 NGKWLGN--RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQY 252
G + N R + NWA S SV EK +E A ++
Sbjct: 161 AGHVMPNTDRAFKLNWA--------------SYSV----------GEKRSELASDH---- 192
Query: 253 TTVYVGNLSSEVTSVDLHRHF-----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAI 307
+++VG+L+ +VT L F I D R +G+GFVR+ + A+
Sbjct: 193 -SIFVGDLAVDVTDDMLMELFANKYRSVKGAKVIIDANTGRSRGYGFVRFGDDNDRTHAM 251
Query: 308 QMGNARILCGKPIKCSWGSKPTPPGTSSTPLPPPP 342
N +PI+ TP TS PP
Sbjct: 252 TEMNGVYCSTRPIRI---GPATPRRTSGDSGSSPP 283
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 26 AAPQIEPILSGNLPPRFDAS--TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD 83
A P+ SG+ PPR T R+VYVG + P V+ L++ F+ G + K+
Sbjct: 269 ATPRRTSGDSGSSPPRQSDGDLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGK 328
Query: 84 KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAY--ASSQREDTSGH 132
+ GFV + +R A A+ L+G I Q ++++W AS Q SGH
Sbjct: 329 QC--GFVQFVNRADAEEALQALSGSTIGKQAVRLSWGRSPASKQPRGDSGH 377
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|444723404|gb|ELW64061.1| Nucleolysin TIA-1 [Tupaia chinensis]
Length = 387
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 39/192 (20%)
Query: 51 YVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS------------------------ 86
YVGN+ VT AL+ ++FS GP + CK+I +
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAAAALAAMNGR 64
Query: 87 -----------YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA-SSQREDTSGHFN 134
Y FV++ + R AA A+ +NGR I G+ +KVNWA SSQ++DTS HF+
Sbjct: 65 KIMGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFH 124
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI--- 191
VFVGDLSPE+T + A F+ F SDARV+ D TG+S+G+GFVSF N+ Q
Sbjct: 125 VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWQNQIGYPPP 184
Query: 192 NDLNGKWLGNRQ 203
G+W GN Q
Sbjct: 185 YGQWGQWYGNAQ 196
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+LS +VT+A + FS C + +++ D T + + FV F A +A+ +N
Sbjct: 5 YVGNLSRDVTEALILQLFSQIGPCKNCKMIMD--TAGNDPYCFVEFHEHRHAAAALAAMN 62
Query: 196 GKWLGNRQIRCNWAAKGATSGDE-------KQSSDSKSVVELTNG--ISDGQEKSN-EDA 245
G R+I G T+G++ + + + + NG I + K N
Sbjct: 63 G-----RKI------MGKTAGNDPYCFVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATT 111
Query: 246 PENNPQYTT----VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFV 295
P + + T+ V+VG+LS E+T+ D+ F G I D RV +D KG+GFV
Sbjct: 112 PSSQKKDTSNHFHVFVGDLSPEITTEDIKAAFAPF--GRISDARVVKDMATGKSKGYGFV 169
Query: 296 RY 297
+
Sbjct: 170 SF 171
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFV--------------- 170
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
G Q++ + ++T VY+ N ++ L F AL
Sbjct: 171 -----------GRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 141/307 (45%), Gaps = 22/307 (7%)
Query: 36 GNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGFVDY 92
G L P D + R+++ + QV ++++ FS E + I + + Y FVD
Sbjct: 70 GELEPWIDENFIRNLWF-QMGEQVNVKMIRDKFSGK-QHESSRSNIDIPRSNAGYCFVD- 126
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTD 146
F +AA +TL+G I + K+NWA A RE+ F++FVGDL PEV +
Sbjct: 127 FTTPAAAAKALTLSGTPIPNTSRTFKLNWASGGGLADRSREERGPEFSIFVGDLGPEVNE 186
Query: 147 ATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L + F S FP+C A++M D +G SRG+GFV F ++ D Q A+ ++ G + GNR +R
Sbjct: 187 YVLVSLFQSRFPSCKSAKIMTDPISGMSRGYGFVRFSDETDQQRALTEMQGVYCGNRPMR 246
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGIS--DGQEKSNEDAPE-----NNPQYTTVYVG 258
+ A + G AP+ +P TTV+VG
Sbjct: 247 ISTATPKNKGAGAGPGAMGMPGAGPAGMFPPMGGPPMGYYGAPQPMNQFTDPNNTTVFVG 306
Query: 259 NLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
LS VT +L F G I V++ KG GFV++ A +AI +
Sbjct: 307 GLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNS 364
Query: 319 PIKCSWG 325
++ SWG
Sbjct: 365 RVRLSWG 371
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 136/300 (45%), Gaps = 32/300 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRR 96
P S ++++ N+ + + L E FS+ GP+ CK+ YGFV Y
Sbjct: 125 PSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDE 184
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH----FNVFVGDLSPEVTDATLFAC 152
+A AI LNG + + + V QR D SG NV+V +LS ++D L
Sbjct: 185 AAQGAIDKLNGMLLNDKQVYVGPFVHKLQR-DPSGEKVKFTNVYVKNLSESLSDEELNKV 243
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F + +M D + G+S+GFGFV+F N +DA A++ LNGK +++ W
Sbjct: 244 FGEFGVTTSCVIMRDGE-GKSKGFGFVNFENSDDAARAVDALNGKTFDDKE----WFVGK 298
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+++ + + +D + SN +YV NL VT L H
Sbjct: 299 AQKKSERETELKQKFEQSLKEAADKSQGSN------------LYVKNLDESVTDDKLREH 346
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V RD +G GFV +ST EA AI N +++ KP+ + +
Sbjct: 347 FAPF--GTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQR 404
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK----KDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L E F+ G + ++ + + YG+V+Y + A+ A+
Sbjct: 46 SLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNE 105
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN + G+ I+V ++ S R+ SG N+F+ +L + L FS F +
Sbjct: 106 LNFMALNGRAIRVMYSVRDPSLRK--SGVGNIFIKNLDKSIDHKALHETFSAFGPILSCK 163
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V D +G+S+G+GFV + E AQ AI+ LNG L ++Q+
Sbjct: 164 VAVD-PSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFV------------- 209
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
K D ++T VYV NLS ++ +L++ F V T
Sbjct: 210 ---------------HKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTT--S 252
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
+ RD KGFGFV + +AA A+ N + K
Sbjct: 253 CVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDK 292
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
G +++VGDL VTD+ LF F+ RV D T RS G+G+V++ +DA A
Sbjct: 43 GTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRA 102
Query: 191 INDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNP 250
+N+LN L R IR ++ + S KS V
Sbjct: 103 LNELNFMALNGRAIRVMYSV--------RDPSLRKSGV---------------------- 132
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAAL 305
+++ NL + LH F A G I +V D KG+GFV+Y T A
Sbjct: 133 --GNIFIKNLDKSIDHKALHETFSAF--GPILSCKVAVDPSGQSKGYGFVQYDTDEAAQG 188
Query: 306 AIQMGNARILCGKPI 320
AI N +L K +
Sbjct: 189 AIDKLNGMLLNDKQV 203
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSA 98
D S ++YV N+ VT+ L+E F+ G + CK+++ D S GFV + A
Sbjct: 322 DKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMR-DPSGVSRGSGFVAFSTPEEA 380
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE 127
AI +NG+ I +P+ V A R+
Sbjct: 381 TRAITEMNGKMIVTKPLYVALAQRKEDRK 409
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L + VT L F + V D+ +R G+G+V Y+T +A+ A+
Sbjct: 45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALN 104
Query: 309 MGNARILCGKPIKCSW 324
N L G+ I+ +
Sbjct: 105 ELNFMALNGRAIRVMY 120
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ ++ S YGFV + +
Sbjct: 91 PGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILSCKVVCDERGSKGYGFVHFETEEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE+ G N+++ + + D L
Sbjct: 151 ANRAIETMNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEV 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F+ F RVM D++ GRSRGFGFV+F + EDAQ A++++NGK L + I A K
Sbjct: 211 FAAFGRTLSVRVMKDER-GRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q + K EL Q++ Q +YV NL + L +
Sbjct: 270 L----ERQ-GELKRKFELIK-----QDRIQRY------QGVNLYVKNLDDSIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V D +GFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FAPY--GTITSAKVMTDGPQSRGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L + FS GP+ + +I + Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG N+F+ ++ + + L+ FS F
Sbjct: 72 MNYDVIKGRPIRIMW----SQRDPGLRKSGVGNIFIKNMDESIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D++ S+G+GFV F +E A AI +NG L +R++ + + + ++
Sbjct: 128 CKVVCDERG--SKGYGFVHFETEEAANRAIETMNGMLLNDRKV---FVGHFKSRKEREEE 182
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
SK++ ++T +Y+ N + L F A G
Sbjct: 183 LGSKAL-----------------------KFTNIYIKNFGEDYNDEKLKEVFAAF--GRT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
VRV +D +GFGFV ++ H +A A+ N + L GK I K
Sbjct: 218 LSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQK 268
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 27 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 86
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 87 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 146
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 147 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 205
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 206 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 249
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 250 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 306
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS
Sbjct: 1 AERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 56
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 57 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FK 110
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
S E+++ E TN VY+ N ++ L F
Sbjct: 111 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFG 148
Query: 275 ----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 149 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 204
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 145/298 (48%), Gaps = 29/298 (9%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGF 89
++ N P S +V+V N++ + N +LQE+FS G + CK+ + D + YGF
Sbjct: 175 VMWSNRDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGDILSCKVARNDDGTSRGYGF 234
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR--EDTSGHFNVFVGDLSPEVTDA 147
V + + SA +AI LN H G+ + V S+R + + N+++ +L ++T+
Sbjct: 235 VQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSERSANNDDKYTNLYMKNLDDDMTEE 294
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
+ FS F ++M + G S+GFGFVSF++ + A+ A +NG LG++ +
Sbjct: 295 LIKLKFSQFGPLISVKIM-KRDDGTSKGFGFVSFKSPDSAKKAKEAMNGIPLGSKSLYVA 353
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
A K A + K ++L + +EK NE ++N + VY+ N+S V
Sbjct: 354 RAQKKA---------ERKQYLQLLH-----EEKRNEILTKSNG--SNVYIKNISDRVDDE 397
Query: 268 DLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
L F G I V++ RD KGFGFV Y+T EA A+ + KP+
Sbjct: 398 TLRERFDEF--GNITSVKIMRDDKGISKGFGFVCYNTPDEAKCAVSSMRGVMFYDKPL 453
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 46/294 (15%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
+T ++YVG++H L + FS G + ++ + +S YG+V+YF + A
Sbjct: 99 ATVPALYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQADAMT 158
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ +N I +PI+V W S++ D SG NVFV +L+ + + L FS F
Sbjct: 159 ALEKMNHSLILDKPIRVMW---SNRDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFGD 215
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+V + G SRG+GFV F QE A AI +LN RQ+
Sbjct: 216 ILSCKVARNDD-GTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFI-------- 266
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
K +E + N+ +YT +Y+ NL ++T + F
Sbjct: 267 ---------------------KKSERSANNDDKYTNLYMKNLDDDMTEELIKLKFSQF-- 303
Query: 279 GTIEDVRV-QRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G + V++ +RD KGFGFV + + A A + N L K + + K
Sbjct: 304 GPLISVKIMKRDDGTSKGFGFVSFKSPDSAKKAKEAMNGIPLGSKSLYVARAQK 357
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG------FGFVRYSTHPE 302
N +YVG+L + L F VG + VRV RD +G+V Y + +
Sbjct: 98 NATVPALYVGDLHEDAQEEHLFDAFSK--VGAVTSVRVCRDTATSSSLRYGYVNYFSQAD 155
Query: 303 AALAIQMGNARILCGKPIKCSWGSK 327
A A++ N ++ KPI+ W ++
Sbjct: 156 AMTALEKMNHSLILDKPIRVMWSNR 180
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDR 95
P + + ++YVG + +VT+A+L E+F GP+ + K +S +GF+++
Sbjct: 5 PILERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGE 64
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A AI +N ++G+PIKVN A A + D NVFVG+L PEV + LF FS
Sbjct: 65 EDADYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSA 122
Query: 156 FPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F ++M D +TG S+GF FV+F + E + SAI +NG++L NR I ++A K T
Sbjct: 123 FGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDT 182
Query: 215 SGD 217
G+
Sbjct: 183 KGE 185
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 40/204 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L +VTDA L+ F + D+ T +GFGF+ F +EDA AI +
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + I+ N A S EK N D N
Sbjct: 75 NMIKLYGKPIKVNKA-----SAHEK----------------------NMDVGAN------ 101
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VGNL EV L F A V ++ ++ RD KGF FV +++ + AI+
Sbjct: 102 VFVGNLDPEVDEKLLFDTFSAFGV-ILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIE 160
Query: 309 MGNARILCGKPIKCSWGSKPTPPG 332
N + LC + I S+ K G
Sbjct: 161 AMNGQFLCNRAITVSYAFKKDTKG 184
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T+YVG L +VT L F + G + V + +D+ GFGF+ + +A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELF--VQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDAD 68
Query: 305 LAIQMGNARILCGKPIKCSWGS 326
AI++ N L GKPIK + S
Sbjct: 69 YAIKIMNMIKLYGKPIKVNKAS 90
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 46 PPLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 105
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 106 AERAIEKMNGMLLNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 165
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 166 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 224
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 225 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 268
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 269 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTGMNGRIVATKPLYVALAQR 325
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 109/256 (42%), Gaps = 40/256 (15%)
Query: 79 LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNV 135
+I + Y +V++ A A+ T+N I G+P+++ W SQR+ SG N+
Sbjct: 1 MITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMW----SQRDPPLRKSGVGNI 56
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
F+ +L + + L+ FS F +V+ D+ S+G+GFV F QE A+ AI +N
Sbjct: 57 FIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMN 114
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
G L +R++ S E+++ E TN V
Sbjct: 115 GMLLNDRKVSVGR----FKSRKEREAELGARAKEFTN----------------------V 148
Query: 256 YVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGN 311
Y+ N ++ L F AL V + D + KGFGFV + H +A A+ N
Sbjct: 149 YIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMN 207
Query: 312 ARILCGKPIKCSWGSK 327
+ L GK I K
Sbjct: 208 GKELNGKQIYVGRAQK 223
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 54 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 113
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 114 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 173
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 174 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 232
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 233 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 276
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 277 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 333
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 40/238 (16%)
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACF 153
+A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ F
Sbjct: 27 AAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 82
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 83 SAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----F 136
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
S E+++ E TN VY+ N ++ L F
Sbjct: 137 KSRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLF 174
Query: 274 H----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 175 GKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 231
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDR 95
P + + ++YVG + +VT+A+L E+F GP+ + K +S +GF+++
Sbjct: 5 PILERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGE 64
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A AI +N ++G+PIKVN A A + D NVFVG+L PEV + LF FS
Sbjct: 65 EDADYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSA 122
Query: 156 FPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F ++M D +TG S+GF FV+F + E + SAI +NG++L NR I ++A K T
Sbjct: 123 FGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDT 182
Query: 215 SGD 217
G+
Sbjct: 183 KGE 185
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 40/204 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L +VTDA L+ F + D+ T +GFGF+ F +EDA AI +
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + I+ N A S EK N D N
Sbjct: 75 NMIKLYGKPIKVNKA-----SAHEK----------------------NMDVGAN------ 101
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VGNL EV L F A V ++ ++ RD KGF FV +++ + AI+
Sbjct: 102 VFVGNLDPEVDEKLLFDTFSAFGV-ILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIE 160
Query: 309 MGNARILCGKPIKCSWGSKPTPPG 332
N + LC + I S+ K G
Sbjct: 161 AMNGQFLCNRAITVSYAFKKDTKG 184
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T+YVG L +VT L F + G + V + +D+ GFGF+ + +A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELF--VQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDAD 68
Query: 305 LAIQMGNARILCGKPIKCSWGS 326
AI++ N L GKPIK + S
Sbjct: 69 YAIKIMNMIKLYGKPIKVNKAS 90
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP T A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT ++L E+FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+N I GQPI++ W++ SG N+F+ +L + + L+ FS F + ++V
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK-SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
++++ SRGFGFV F E AQ AIN +NG L +R++
Sbjct: 131 VYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------------------ 170
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
G ++K + +T +YV NL + V L F G ++ V
Sbjct: 171 --------GHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQF--GNMQSV 220
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 221 KVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 26/304 (8%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ + P S ++++ N+ + N L + FS+ G + K++ + S +GFV
Sbjct: 84 IMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFV 143
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVT 145
+ +A AI T+NG + + + V + +RE G N++V +L V
Sbjct: 144 HFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVD 203
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F +VM D G+SRGFGFV+F E+AQ A++ +NGK + + +
Sbjct: 204 EQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLY 262
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K A E+QS + ++ QE+ +N Q +YV NL +
Sbjct: 263 VGRAQKRA----ERQSELKRRFEQMK------QER------QNRYQGVNLYVKNLDDSIN 306
Query: 266 SVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F V T V + KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 307 DERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 324 WGSK 327
+
Sbjct: 367 LAQR 370
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 42/201 (20%)
Query: 128 DTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
DT GH +++VGDL P+VT++ L+ FS RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
DA+ A++ +N + + + IR W S+
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMW--------------------------------SHR 89
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYST 299
D +++ NL + + + L+ F G+I +V + +GFGFV + T
Sbjct: 90 DPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF--GSILSSKVVYNEHGSRGFGFVHFET 147
Query: 300 HPEAALAIQMGNARILCGKPI 320
H A AI N +L + +
Sbjct: 148 HEAAQKAINTMNGMLLNDRKV 168
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L+EVFS+ G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 32 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 91
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 92 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 151
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 152 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 210
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 211 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 254
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 255 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 311
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 40/238 (16%)
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACF 153
+A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ F
Sbjct: 5 AAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 60
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 61 SAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----F 114
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
S E+++ E TN VY+ N ++ L F
Sbjct: 115 KSRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLF 152
Query: 274 H----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 153 GKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 209
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 132/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ+AI+ +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH----FKSRREREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQRLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD +GFGFV + H EA A+ N R + G+
Sbjct: 218 LSVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGR 259
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 131/290 (45%), Gaps = 26/290 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ ++NG+ + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-VSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDR-LTRYQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F V T V + KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 72 MNFEVIKGQPIRIMWSQR 89
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 32/317 (10%)
Query: 32 PILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS---Y 87
P +G PP+ ++++G + P + ++ VF S+ G K+I+ S Y
Sbjct: 40 PPGAGQEPPK------TTLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGY 93
Query: 88 GFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSP 142
FV+ F AA + LNG + + K+NWA +R+D +++FVGDL P
Sbjct: 94 CFVE-FQSPDAATKALGLNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGP 152
Query: 143 EVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
EV + L + F FP+C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GN
Sbjct: 153 EVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGN 212
Query: 202 RQIRC------NWAAKGATSGDEKQSSDS-------KSVVELTNGISDGQEKSNEDAPEN 248
R +R N G G + + G G + +
Sbjct: 213 RPMRISTATPKNRGNHGFGHGQHNGGPMMGGGVMPQQQMWNGAQGFYGGFNPATQMNQFT 272
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+P TTV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 273 DPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAIN 330
Query: 309 MGNARILCGKPIKCSWG 325
+ ++ SWG
Sbjct: 331 QMQGYPIGNSRVRLSWG 347
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|297836592|ref|XP_002886178.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
gi|297332018|gb|EFH62437.1| hypothetical protein ARALYDRAFT_480759 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 117/212 (55%), Gaps = 12/212 (5%)
Query: 29 QIEPILSGNLPPRFDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-- 84
+I P + NL + A + +VYVGN+ Q++ LL E+F GP+ + KD+
Sbjct: 4 RIAPGVGANLLGQHSAERNQDATVYVGNLDAQLSEELLWELFVQAGPVVNV-YVPKDRVT 62
Query: 85 ---SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLS 141
+YGF++Y A AI LN + G+PI+VN A + D N+F+G+L
Sbjct: 63 NLHQNYGFIEYRSEEDADYAIKVLNMIKVHGKPIRVNKASQDKKSLDVGA--NLFIGNLD 120
Query: 142 PEVTDATLFACFSVFPT-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P+V + L+ FS F S+ ++M D TG SRGFGF+S+ + E + +AI + G++L
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMTGQYLS 180
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
NRQI ++A K T G E+ + ++ ++ TN
Sbjct: 181 NRQITVSYAYKKDTKG-ERHGTPAERLLAATN 211
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG+L ++++ L+ F + V D+ T + +GF+ +R++EDA AI L
Sbjct: 27 VYVGNLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N + + IR N K S D KS+ N
Sbjct: 87 NMIKVHGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
+ L + I S+ K
Sbjct: 173 AMTGQYLSNRQITVSYAYK 191
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q TVYVGNL ++++ L F + G + +V V +D+ +GF+ Y + +A
Sbjct: 23 QDATVYVGNLDAQLSEELLWELF--VQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDAD 80
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
AI++ N + GKPI+ + S+
Sbjct: 81 YAIKVLNMIKVHGKPIRVNKASQ 103
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL ++ L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDDIDDERLQKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + LQ+ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVCRDLITRGSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQR 89
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT ++L E+FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+N I GQPI++ W++ SG N+F+ +L + + L+ FS F + ++V
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK-SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
++++ SRGFGFV F E AQ AIN +NG L +R++
Sbjct: 131 VYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------------------ 170
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
G ++K + +T +YV NL + V L F G ++ V
Sbjct: 171 --------GHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQF--GNMQSV 220
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 221 KVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 26/304 (8%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ + P S ++++ N+ + N L + FS+ G + K++ + S +GFV
Sbjct: 84 IMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFV 143
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVT 145
+ +A AI T+NG + + + V + +RE G N++V +L V
Sbjct: 144 HFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVD 203
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F +VM D G+SRGFGFV+F E+AQ A++ +NGK + + +
Sbjct: 204 EQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLY 262
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K A E+QS + ++ QE+ +N Q +YV NL +
Sbjct: 263 VGRAQKRA----ERQSELKRRFEQMK------QER------QNRYQGVNLYVKNLDDSIN 306
Query: 266 SVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F V T V + KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 307 DERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 324 WGSK 327
+
Sbjct: 367 LAQR 370
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 42/201 (20%)
Query: 128 DTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
DT GH +++VGDL P+VT++ L+ FS RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
DA+ A++ +N + + + IR W S+
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMW--------------------------------SHR 89
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYST 299
D +++ NL + + + L+ F G+I +V + +GFGFV + T
Sbjct: 90 DPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF--GSILSSKVVYNEHGSRGFGFVHFET 147
Query: 300 HPEAALAIQMGNARILCGKPI 320
H A AI N +L + +
Sbjct: 148 HEAAQKAINTMNGMLLNDRKV 168
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L+EVFS+ G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 33/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV++F SA A+
Sbjct: 101 KTIWVGDLQYWMDENYLHSCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 160
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G H+ + K+NWA S +R + + ++FVGDL+ +VTD L FS +
Sbjct: 161 NFTG-HVMPNTDRAFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYR 219
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A++++NG + R IR G
Sbjct: 220 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRI---------GP 270
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + SN TVYVG L V+ +L + F
Sbjct: 271 ATPRRSSGDSGSSTPGHSDG-DSSNR----------TVYVGGLDPNVSEDELRKAFAKY- 318
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV++++ +A A+Q N ++ + ++ SWG P+
Sbjct: 319 -GDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLIGKQAVRLSWGRSPS 369
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 22/185 (11%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+FSS ++G K+I + YGFV + D
Sbjct: 187 RSEVASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 246
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 247 NDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSSNRTVYVGGLDPNV 306
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + + ++ ++ GFV F ++ DA+ A+ LNG +G + +
Sbjct: 307 SEDELRKAFAKYGDLASVKIPLGKQC------GFVQFASRTDAEEALQGLNGSLIGKQAV 360
Query: 205 RCNWA 209
R +W
Sbjct: 361 RLSWG 365
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S+ R+VYVG + P V+ L++ F+ G L K+ + GFV + R A A+
Sbjct: 292 SSNRTVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQC--GFVQFASRTDAEEALQG 349
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 350 LNGSLIGKQAVRLSWGRSPSHKQ 372
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 27 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 86
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 87 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 146
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 147 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 205
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 206 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 249
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 250 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 306
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS
Sbjct: 1 AERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 56
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 57 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FK 110
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
S E+++ E TN VY+ N ++ L F
Sbjct: 111 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFG 148
Query: 275 ----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 149 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 204
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ ++ I + Y +V+Y R + A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPRDSERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL ++ L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVCRDLITRGSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQR 89
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
>gi|170590788|ref|XP_001900153.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
gi|158592303|gb|EDP30903.1| Hypothetical RNA-binding protein C08B11.5 in chromosome II,
putative [Brugia malayi]
Length = 375
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 103/183 (56%), Gaps = 7/183 (3%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDR 95
P + + ++YVG + +VT+A+L E+F GP+ + K +S +GF+++
Sbjct: 5 PILERNQDATIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGE 64
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A AI +N ++G+PIKVN A A + D NVFVG+L PEV + LF FS
Sbjct: 65 EDADYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGA--NVFVGNLDPEVDEKLLFDTFSA 122
Query: 156 FPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F ++M D +TG S+GF FV+F + E + SAI +NG++L NR I ++A K T
Sbjct: 123 FGVILQVPKIMRDAETGXSKGFAFVNFASFEASDSAIEAMNGQFLCNRAITVSYAFKKDT 182
Query: 215 SGD 217
G+
Sbjct: 183 KGE 185
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 40/204 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
++VG L +VTDA L+ F + D+ T +GFGF+ F +EDA AI +
Sbjct: 15 IYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKIM 74
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + I+ N A S EK N D N
Sbjct: 75 NMIKLYGKPIKVNKA-----SAHEK----------------------NMDVGAN------ 101
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
V+VGNL EV L F A V ++ ++ RD KGF FV +++ + AI+
Sbjct: 102 VFVGNLDPEVDEKLLFDTFSAFGV-ILQVPKIMRDAETGXSKGFAFVNFASFEASDSAIE 160
Query: 309 MGNARILCGKPIKCSWGSKPTPPG 332
N + LC + I S+ K G
Sbjct: 161 AMNGQFLCNRAITVSYAFKKDTKG 184
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T+YVG L +VT L F + G + V + +D+ GFGF+ + +A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELF--VQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDAD 68
Query: 305 LAIQMGNARILCGKPIKCSWGS 326
AI++ N L GKPIK + S
Sbjct: 69 YAIKIMNMIKLYGKPIKVNKAS 90
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL ++ L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDDIDDERLQKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + LQ+ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVCRDLITRGSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQR 89
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLRELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLHKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLRELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 20 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 79
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 140 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 198
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 199 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 242
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 243 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 299
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 20 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 79
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 140 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 198
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 199 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 242
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 243 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 299
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 128/275 (46%), Gaps = 43/275 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP+VT A L E FS G + ++ + + Y +V+Y A A+
Sbjct: 9 SLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALEE 68
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LN I +P ++ WA + SG N+F+ +L+ E+ + L+ FS F T +V
Sbjct: 69 LNFEKIHDKPCRIMWAQRNPAAR-RSGAGNIFIKNLNKEIDNKALYDTFSAFGTILSCKV 127
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
D+K G SRG+GFV F +EDAQ AI+ +NGK L
Sbjct: 128 AADEK-GESRGYGFVHFEKEEDAQKAIDTVNGKML------------------------L 162
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNL-SSEVTSVDLHRHFHALCVGTIED 283
K VV +T +S E + YT +YV NL S T+ DL + F GTI
Sbjct: 163 KQVVTVTKFLS-----RKEREQQGGRTYTNIYVKNLPDSYATNDDLKKLFEKF--GTITS 215
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAIQMGNAR 313
+ +D +GFGFV + A A++ N +
Sbjct: 216 TFLAKDENDKSRGFGFVNFENSEAANAAVEAMNEK 250
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 149/323 (46%), Gaps = 47/323 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++++ N++ ++ N L + FS+ G + CK+ +K YGFV + A AI T+
Sbjct: 97 NIFIKNLNKEIDNKALYDTFSAFGTILSCKVAADEKGESRGYGFVHFEKEEDAQKAIDTV 156
Query: 106 NGRHIFGQPIKVNWAYASSQREDTSG--HFNVFVGDL-SPEVTDATLFACFSVFPTCSDA 162
NG+ + Q + V + +RE G + N++V +L T+ L F F T +
Sbjct: 157 NGKMLLKQVVTVTKFLSRKEREQQGGRTYTNIYVKNLPDSYATNDDLKKLFEKFGTITST 216
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL-GNRQIRCNWAAKGATSGDEKQS 221
+ D+ +SRGFGFV+F N E A +A+ +N K + +R++ A K +
Sbjct: 217 FLAKDE-NDKSRGFGFVNFENSEAANAAVEAMNEKEIETDRKLFVGRAMK--------KH 267
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ + + + I +++ N++ + +Y+ +L +VT L F GTI
Sbjct: 268 ERERELKRIHDKIRQERDEKNKN--------SNLYIKHLPEDVTEDALRDKFSKF--GTI 317
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS-----------WG 325
+++ D +GFGFV + + EAA AIQ + ++ GKP+ +
Sbjct: 318 TSLKIMTDNNGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVALALRKVDRQKQLA 377
Query: 326 SKPTPPGTSST-----PLPPPPA 343
S+ T PG +PPP A
Sbjct: 378 SRRTMPGQMPMGYLPFMMPPPQA 400
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 92/186 (49%), Gaps = 21/186 (11%)
Query: 46 TCRSVYVGNI-HPQVTNALLQEVFSSTGPLEGCKLIK--KDKS-SYGFVDYFDRRSAALA 101
T ++YV N+ TN L+++F G + L K DKS +GFV++ + +A A
Sbjct: 184 TYTNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAA 243
Query: 102 IVTLNGRHI-------FGQPIKVNWAYAS---------SQREDTSGHFNVFVGDLSPEVT 145
+ +N + I G+ +K + +R++ + + N+++ L +VT
Sbjct: 244 VEAMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKHLPEDVT 303
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F T + ++M D G SRGFGFV+F + ++A +AI +++G + + +
Sbjct: 304 EDALRDKFSKFGTITSLKIMTDN-NGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLY 362
Query: 206 CNWAAK 211
A +
Sbjct: 363 VALALR 368
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q ++YVG+L EVT L+ F + G++ +RV RD G+ +V Y H +A
Sbjct: 6 QNASLYVGDLHPEVTEATLYEFFSQM--GSVISIRVCRDAVSRQSLGYAYVNYQQHADAK 63
Query: 305 LAIQMGNARILCGKPIKCSWGSK 327
A++ N + KP + W +
Sbjct: 64 HALEELNFEKIHDKPCRIMWAQR 86
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 147/292 (50%), Gaps = 25/292 (8%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAI 102
+S+++G++ + + +FS+TG + K+I+ ++ Y GF+++ +A +
Sbjct: 66 IKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAERIL 125
Query: 103 VTLNGRHI--FGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
T NG + Q ++NWA A +R+D + VF+GDL+ +V D L F +V+
Sbjct: 126 QTYNGTPMPNSEQTFRLNWATLGAGERRQDDGPDYTVFIGDLAADVNDYLLQETFRNVYS 185
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D+ TGRS+G+GFV F ++ + A+ ++NG++ R +R AA
Sbjct: 186 SVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKKPLTQ 245
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ Q + +S + N+ E++P TT++VG L VT L F
Sbjct: 246 QYQKAAYQS------------PQGNQG--ESDPNNTTIFVGALDPSVTDDTLRAVFSKY- 290
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
G + V++ K GFV+++ A A+ M N + G+ I+ SWG P+
Sbjct: 291 -GELVHVKIPAGKRCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPS 341
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT+ L+ VFS G L K+ + GFV + +R A A+ LNG
Sbjct: 268 TIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRC--GFVQFANRTCAEQALSMLNGT 325
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ I+++W + S ++
Sbjct: 326 QIAGQNIRLSWGRSPSNKQ 344
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLRELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 106 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 165
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 166 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 225
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 226 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 284
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 285 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 328
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 329 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 385
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 40/234 (17%)
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFP 157
A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 83 ALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 138
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S
Sbjct: 139 NILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRK 192
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH--- 274
E+++ E TN VY+ N ++ L F
Sbjct: 193 EREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFG 230
Query: 275 -ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 231 PALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 283
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 27/301 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVT 104
++++G + P + ++ VF S+ G K+I+ S Y FV+ F AA +
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVE-FTTPEAATKALG 87
Query: 105 LNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
LNG + + K+NWA +R+D +++FVGDL PEV + L + F FP+
Sbjct: 88 LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 147
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGD 217
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A K +
Sbjct: 148 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 207
Query: 218 EKQSSDSKSVVELTNGISD-------------GQEKSNEDAPENNPQYTTVYVGNLSSEV 264
+ G+ G + + +P TTV+VG LS V
Sbjct: 208 FGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGYV 267
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
T +L F G I V++ KG GFV++ A +AI + ++ SW
Sbjct: 268 TEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 325
Query: 325 G 325
G
Sbjct: 326 G 326
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 86/226 (38%), Gaps = 56/226 (24%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F + P I D S YGFV + D
Sbjct: 114 RDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDE 173
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS------------------------- 130
A+V + G + +P++++ A ++
Sbjct: 174 NDQQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGM 233
Query: 131 -----GHFN---------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKT 170
G +N VFVG LS VT+ L + F F + ++
Sbjct: 234 QGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP----- 288
Query: 171 GRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+G GFV F ++ A+ AIN + G +GN ++R +W SG
Sbjct: 289 -PGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 333
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 137 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 196
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 197 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 256
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 257 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 315
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 316 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 359
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 360 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 416
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 134/328 (40%), Gaps = 73/328 (22%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 20 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 79
Query: 98 AALAIVTLNG---------------RHIF----------------GQPIKVNWAYASSQR 126
A AI +NG ++F G+P+++ W SQR
Sbjct: 80 AERAIEKMNGMLLNXXXXEASNIDSENVFPAAERALDTMNFDVIKGKPVRIMW----SQR 135
Query: 127 EDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
+ + SG N+F+ +L + + L+ FS F +V+ D+ S+G+GFV F
Sbjct: 136 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFET 193
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
QE A+ AI +NG L +R++ S E+++ E TN
Sbjct: 194 QEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAELGARAKEFTN----------- 238
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYST 299
VY+ N ++ L F AL V + D + KGFGFV +
Sbjct: 239 -----------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFER 286
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
H +A A+ N + L GK I K
Sbjct: 287 HEDAQKAVDEMNGKELNGKQIYVGRAQK 314
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 102/229 (44%), Gaps = 28/229 (12%)
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 1 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 56
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ- 220
+V+ D+ S+G+GFV F QE A+ AI +NG L N A++ D +
Sbjct: 57 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLL-------NXXXXEASNIDSENV 107
Query: 221 -SSDSKSVVELTNGISDGQEK----SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+ +++ + + G+ S D +++ NL + + L+ F A
Sbjct: 108 FPAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSA 167
Query: 276 LCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
G I +V D KG+GFV + T A AI+ N +L + +
Sbjct: 168 F--GNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 214
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 29/303 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P + ++ VF S+ + +DK+S Y FV+ F AA +
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSGNAGYCFVE-FQSPEAATKALN 108
Query: 105 LNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+NG + + K+NWA +R+D +++FVGDL PEV + L + F FP+
Sbjct: 109 MNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 168
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 169 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 228
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPEN----------------NPQYTTVYVGNLSS 262
+ + G+ Q+ N + +P TTV+VG LS
Sbjct: 229 FGGQGHQHGGPMMPGMPQQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSG 288
Query: 263 EVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
VT +L F G I V++ KG GFV++ A +AI + ++
Sbjct: 289 YVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRL 346
Query: 323 SWG 325
SWG
Sbjct: 347 SWG 349
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + E+++ L
Sbjct: 151 ANRAIATMNGMLLNDRKVFVGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQET 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS+F +VM D GRS+GFGFV+F +DAQ A+ D+NGK + R + A K
Sbjct: 211 FSIFGKTLSVKVMTDN-IGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ + Q +YV NL + L +
Sbjct: 270 M----ERQSELKRKFEQIK------QERVSRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 136/291 (46%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC-NWAAKGATSGDEKQ 220
+V+ D+ SRG+GFV F E A AI +NG L +R++ N+ ++ E++
Sbjct: 128 CKVVCDENG--SRGYGFVHFETHEAANRAIATMNGMLLNDRKVFVGNFKSR-----RERE 180
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HAL 276
+ +E TN VY+ N E+++ L F L
Sbjct: 181 AEYGAKAMEFTN----------------------VYIKNFGEEMSNERLQETFSIFGKTL 218
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + R KGFGFV + H +A A++ N + + G+ + K
Sbjct: 219 SVKVMTD-NIGRSKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQK 268
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F + RVM D+ +G RGFGFVSF N EDAQ A++++NGK L R + A K
Sbjct: 211 FSKFGNATSVRVMTDE-SGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q + ++ Q+++ Q +YV NL + L +
Sbjct: 270 M----ERQMELKRRFEQMK------QDRTTRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS G + + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQP+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGQPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F + A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ L F G
Sbjct: 182 ELGARAREFTN----------------------VYIKNFGEDMDDEKLKEIFSKF--GNA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
VRV D +GFGFV + H +A A+ N + L G+
Sbjct: 218 TSVRVMTDESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGR 259
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALAI 307
++YVG+L +VT L+ F G I +RV RD G+ +V + +A A+
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSP--AGAIVSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 308 QMGNARILCGKPIKCSWGSK 327
N ++ G+P++ W +
Sbjct: 70 DTMNFDVIKGQPVRIMWSQR 89
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 141/290 (48%), Gaps = 16/290 (5%)
Query: 49 SVYVG-NIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
SV +G + V A L F+ G + K+I+ + + YGFV++ +A +
Sbjct: 4 SVRLGCGLRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQ 63
Query: 104 TLNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCS 160
T N Q ++NWA +R D + ++FVGDL+P++TD L F +P+
Sbjct: 64 TYNATD---QTFRLNWASFGIGERRPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVR 120
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGDEK 219
A+V+ D TGRS+G+GFV F ++ + A+ ++NG + R +R + A K TS
Sbjct: 121 GAKVVSDPNTGRSKGYGFVKFSDENERNRAMTEMNGVYCSTRPMRISAATPKKTTSAYAA 180
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
++ V + PE + T ++VGNL V+ +L ++F L G
Sbjct: 181 PAAPVPKPVYPVPAYT--APVVQVQPPEYDVNNTAIFVGNLDLNVSEEELKQNF--LQFG 236
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
I V+VQ KG GFV++ T A AIQ +++ + ++ SWG T
Sbjct: 237 EIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQEKMIGQQVVRISWGRTLT 286
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 47/207 (22%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDR 95
R DA+ S++VG++ P +T+ LLQE+F + P + G K++ + YGFV + D
Sbjct: 85 RPDAALEHSIFVGDLAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDE 144
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN--------------------- 134
A+ +NG + +P++++ A++ ++ TS +
Sbjct: 145 NERNRAMTEMNGVYCSTRPMRIS---AATPKKTTSAYAAPAAPVPKPVYPVPAYTAPVVQ 201
Query: 135 ------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
+FVG+L V++ L F F +V +G GFV F
Sbjct: 202 VQPPEYDVNNTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQ------SGKGCGFVQFG 255
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ A+ AI + K +G + +R +W
Sbjct: 256 TRASAEEAIQKMQEKMIGQQVVRISWG 282
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 40/201 (19%)
Query: 140 LSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 199
L V +A L CF+ +++ ++ TG+ G+GFV F + A+ + N
Sbjct: 11 LRTAVDEAYLSHCFAPAGEVVSIKIIRNELTGQPEGYGFVEFVSHATAERVLQTYNAT-- 68
Query: 200 GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGN 259
++ R NWA+ G E+ + A E+ +++VG+
Sbjct: 69 -DQTFRLNWASFGIG------------------------ERRPDAALEH-----SIFVGD 98
Query: 260 LSSEVTSVDLHRHFHA-----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
L+ ++T L F A + D R KG+GFV++S E A+ N
Sbjct: 99 LAPDITDYLLQEMFRAHYPSVRGAKVVSDPNTGRSKGYGFVKFSDENERNRAMTEMNGVY 158
Query: 315 LCGKPIKCSWGSKPTPPGTSS 335
+P++ S TP T+S
Sbjct: 159 CSTRPMRI---SAATPKKTTS 176
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 39 PPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSA 98
PP +D + +++VGN+ V+ L++ F G + K+ + GFV + R SA
Sbjct: 204 PPEYDVNNT-AIFVGNLDLNVSEEELKQNFLQFGEIVSVKV--QSGKGCGFVQFGTRASA 260
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG 131
AI + + I Q ++++W + R+D G
Sbjct: 261 EEAIQKMQEKMIGQQVVRISWGRTLTARQDLPG 293
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 27/301 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVT 104
++++G + P + ++ VF S+ G K+I+ S Y FV+ F AA +
Sbjct: 29 TLWMGELEPWMDENFIKGVFLSAAGETVNVKVIRDKNSGNAGYCFVE-FTTPEAATKALG 87
Query: 105 LNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
LNG + + K+NWA +R+D +++FVGDL PEV + L + F FP+
Sbjct: 88 LNGTPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 147
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGD 217
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A K +
Sbjct: 148 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 207
Query: 218 EKQSSDSKSVVELTNGISD-------------GQEKSNEDAPENNPQYTTVYVGNLSSEV 264
+ G+ G + + +P TTV+VG LS V
Sbjct: 208 FGGPGHHAGGAPMMGGVPQQPMWGGMQGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGYV 267
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
T +L F G I V++ KG GFV++ A +AI + ++ SW
Sbjct: 268 TEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSW 325
Query: 325 G 325
G
Sbjct: 326 G 326
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 86/226 (38%), Gaps = 56/226 (24%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F + P I D S YGFV + D
Sbjct: 114 RDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDE 173
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTS------------------------- 130
A+V + G + +P++++ A ++
Sbjct: 174 NDQQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGGPGHHAGGAPMMGGVPQQPMWGGM 233
Query: 131 -----GHFN---------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKT 170
G +N VFVG LS VT+ L + F F + ++
Sbjct: 234 QGFPYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP----- 288
Query: 171 GRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+G GFV F ++ A+ AIN + G +GN ++R +W SG
Sbjct: 289 -PGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 333
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQELFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|212274429|ref|NP_001130902.1| uncharacterized protein LOC100192006 [Zea mays]
gi|194690404|gb|ACF79286.1| unknown [Zea mays]
gi|413934109|gb|AFW68660.1| hypothetical protein ZEAMMB73_687460 [Zea mays]
Length = 357
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 107/190 (56%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
TLN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 TLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ ++ N
Sbjct: 202 PAERLLAANN 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI L
Sbjct: 27 TYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKTL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS+ N
Sbjct: 87 NMIKLYGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 173 AMNNQHLCNRPITVSYAYK 191
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 111 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 170
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 171 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 230
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 231 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 289
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 290 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 333
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 334 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 390
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 129/310 (41%), Gaps = 64/310 (20%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGF------------------- 89
S+YVG++HP VT A+L E FS GP+ ++ +
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPELLPAPQPGEE 71
Query: 90 VDYFDRR-----SAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLS 141
V + R+ + A+ T+N I G+P+++ W SQR+ + SG N+F+ +L
Sbjct: 72 VQFCARKIPRVEPSERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLD 127
Query: 142 PEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
+ + L+ FS F +V+ D+ S+G+GFV F QE A+ AI +NG L +
Sbjct: 128 KSIDNKALYDTFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLND 185
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLS 261
R++ S E+++ E TN VY+ N
Sbjct: 186 RKVFVGR----FKSRKEREAELGARAKEFTN----------------------VYIKNFG 219
Query: 262 SEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG 317
++ L F AL V + D + KGFGFV + H +A A+ N + L G
Sbjct: 220 EDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNG 278
Query: 318 KPIKCSWGSK 327
K I K
Sbjct: 279 KQIYVGRAQK 288
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 127 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 186
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 187 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 246
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 247 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 305
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 306 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 349
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 350 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 406
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 104/240 (43%), Gaps = 40/240 (16%)
Query: 95 RRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFA 151
R+ A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+
Sbjct: 98 RQDAERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYD 153
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
FS F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 154 TFSAFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR--- 208
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
S E+++ E TN VY+ N ++ L
Sbjct: 209 -FKSRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKD 245
Query: 272 HFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 246 LFGKFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 304
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + RVM D+ G+SRGFGFVSF EDAQ A++++NGK + + I A K
Sbjct: 211 FSKYGNAMSIRVMTDE-NGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDR-MTRYQGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMDGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS G + + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ L F G
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDDKLKDIFSKY--GNA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+RV D +GFGFV + H +A A+ N + + GK I K
Sbjct: 218 MSIRVMTDENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQK 268
>gi|255077948|ref|XP_002502554.1| predicted protein [Micromonas sp. RCC299]
gi|226517819|gb|ACO63812.1| predicted protein [Micromonas sp. RCC299]
Length = 325
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 109/202 (53%), Gaps = 9/202 (4%)
Query: 23 SLLAAPQIEPILSGNLPPR--FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI 80
SL+A +I NL + D + +VYVGN+ PQVT ++ EVF GP+ +
Sbjct: 4 SLIAGGRITASAGSNLLGQHAVDRNQEATVYVGNLDPQVTEEIVWEVFVQAGPVVNVYMP 63
Query: 81 KKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
K S+ Y FV+Y A AI LN +FG+PI+ N A + D N+F
Sbjct: 64 KDRVSNAHQGYAFVEYRGEEDADYAIKVLNMIKLFGKPIRANKASVDKKSTDVGA--NLF 121
Query: 137 VGDLSPEVTDATLFACFSVFPTC-SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
VG+L P++ + L+ FS F + ++M D TG SRGFGFVS+ + E + +AI +N
Sbjct: 122 VGNLDPDMDEKLLYDTFSAFGVVITTPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMN 181
Query: 196 GKWLGNRQIRCNWAAKGATSGD 217
G++L NR I +A K T+G+
Sbjct: 182 GQFLCNRPISVTYAYKKDTNGE 203
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 40/204 (19%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG+L P+VT+ ++ F + + D+ + +G+ FV +R +EDA AI L
Sbjct: 33 VYVGNLDPQVTEEIVWEVFVQAGPVVNVYMPKDRVSNAHQGYAFVEYRGEEDADYAIKVL 92
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS D N
Sbjct: 93 NMIKLFGKPIRAN-----------KASVDKKST----------------DVGAN------ 119
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
++VGNL ++ L+ F A V I ++ RD +GFGFV Y + + AI+
Sbjct: 120 LFVGNLDPDMDEKLLYDTFSAFGV-VITTPKIMRDPDTGNSRGFGFVSYDSFEASDAAIE 178
Query: 309 MGNARILCGKPIKCSWGSKPTPPG 332
N + LC +PI ++ K G
Sbjct: 179 AMNGQFLCNRPISVTYAYKKDTNG 202
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 131/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E AQ+AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G I
Sbjct: 182 ELGARALEFTN----------------------IYVKNLHVDVDERCLQDLFSQF--GKI 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD +GFGFV + H +A A+ N + + G+
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEDAQKAVTDMNGKEVSGR 259
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 134/299 (44%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ D S +GFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQNAIRTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLHVDVDERCLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F EDAQ A+ D+NGK + R + A K
Sbjct: 211 FSQFGKILSVKVMRDD-SGHSRGFGFVNFEKHEDAQKAVTDMNGKEVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDR-LTRYQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G I +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FAPY--GMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 72 MNFEVIKGQPIRIMWSQR 89
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 111 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 170
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 171 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 230
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 231 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 289
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 290 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 333
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 334 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 390
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 40/227 (17%)
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFP 157
A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 88 ALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 143
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S
Sbjct: 144 NILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRK 197
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH--- 274
E+++ E TN VY+ N ++ L F
Sbjct: 198 EREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFG 235
Query: 275 -ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
AL V + D + KGFGFV + H +A A+ N + L GK I
Sbjct: 236 PALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 281
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT ++L E+FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+N I GQPI++ W++ SG N+F+ +L + + L+ FS F + ++V
Sbjct: 72 MNFEVIKGQPIRIMWSHRDPGLRK-SGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
++++ SRGFGFV F E AQ AIN +NG L +R++
Sbjct: 131 VYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------------------ 170
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
G ++K + +T +YV NL + V L F G ++ V
Sbjct: 171 --------GHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQF--GNMQSV 220
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 221 KVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 138/304 (45%), Gaps = 26/304 (8%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ + P S ++++ N+ + N L + FS+ G + K++ + S +GFV
Sbjct: 84 IMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFV 143
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVT 145
+ +A AI T+NG + + + V + +RE G N++V +L V
Sbjct: 144 HFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVD 203
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F +VM D G+SRGFGFV+F E+AQ A++ +NGK + + +
Sbjct: 204 EQRLQDLFSQFGNMQSVKVMRD-SNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLY 262
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K A E+QS + ++ QE+ +N Q +YV NL +
Sbjct: 263 VGRAQKRA----ERQSELKRRFEQMK------QER------QNRYQGVNLYVKNLDDSIN 306
Query: 266 SVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F V T V + KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 307 DERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 324 WGSK 327
+
Sbjct: 367 LAQR 370
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 42/201 (20%)
Query: 128 DTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
DT GH +++VGDL P+VT++ L+ FS RV D T RS G+ +++F+
Sbjct: 2 DTGGHGCSLSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
DA+ A++ +N + + + IR W S+
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMW--------------------------------SHR 89
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYST 299
D +++ NL + + + L+ F G+I +V + +GFGFV + T
Sbjct: 90 DPGLRKSGMGNIFIKNLENSIDNKALYDTFSTF--GSILSSKVVYNEHGSRGFGFVHFET 147
Query: 300 HPEAALAIQMGNARILCGKPI 320
H A AI N +L + +
Sbjct: 148 HEAAQKAINTMNGMLLNDRKV 168
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L+EVFS+ G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 131/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 66 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 125
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 126 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 185
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 186 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 244
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 245 ---------------VERQTELKRKFEQMKQDRI-TRYQGVNLYVKNLDDGIDDERLRKE 288
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 289 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 345
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 63 LLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVN 118
+L E FS GP+ + +I + Y +V++ A A+ T+N I G+P+++
Sbjct: 1 MLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIM 60
Query: 119 WAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
W SQR+ + SG N+F+ +L + + L+ FS F +V+ D+ S+G
Sbjct: 61 W----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG--SKG 114
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
+GFV F QE A+ AI +NG L +R++ S E+++ E TN
Sbjct: 115 YGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAELGARAKEFTN--- 167
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKG 291
VY+ N ++ L F AL V + D + KG
Sbjct: 168 -------------------VYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD-ESGKSKG 207
Query: 292 FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
FGFV + H +A A+ N + L GK I K
Sbjct: 208 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 243
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 26 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 85
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 86 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 145
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 146 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 204
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 205 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 248
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP + +
Sbjct: 249 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQR 305
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 40/234 (17%)
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFP 157
A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 3 ALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 58
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S
Sbjct: 59 NILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRK 112
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH--- 274
E+++ E TN VY+ N ++ L F
Sbjct: 113 EREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFG 150
Query: 275 -ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 151 PALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 203
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N +L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKVKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL ++ L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + SSY +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
V E N VY+ N ++ L F AL
Sbjct: 182 ELGAKVKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + DV +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHF 133
GR + +P+ V A ++ED H
Sbjct: 355 GRIVATKPLYVALA---QRKEDRQAHL 378
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKELFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-EGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 94 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 149
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 150 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 203
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 204 ELGAKAKEFTN----------------------VYIKNFGEEVDDDNLKELFSQF--GKT 239
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 240 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 283
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 113 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 172
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 173 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKEL 232
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 233 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 291
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 292 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 335
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 336 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 392
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 41/197 (20%)
Query: 131 GHF---NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
GH+ +++VGDL +VT+A L+ FS RV D T RS G+ +V+F+ DA
Sbjct: 28 GHYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 87
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+ A++ +N + + IR W+ ++ S KS V
Sbjct: 88 ERALDTMNFDVIKGKPIRIMWS--------QRDPSLRKSGV------------------- 120
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEA 303
V++ NL + + L+ F A G I +V D KG+ FV + T A
Sbjct: 121 -----GNVFIKNLDKSIDNKALYDTFSAF--GNILSCKVVCDENGSKGYAFVHFETQEAA 173
Query: 304 ALAIQMGNARILCGKPI 320
AI+ N +L + +
Sbjct: 174 DKAIEKMNGMLLNDRKV 190
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 34 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 93
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 94 MNFDVIKGKPIRIMWSQR 111
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 317 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 376
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 377 GRIVGSKPLYVALAQRKEERK 397
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 20 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 79
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 140 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 198
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 199 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 242
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP + +
Sbjct: 243 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQR 299
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI 261
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + CK++ + S YGFV + R +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGIPLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM DQ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKCKFEQMKQDRITRY-QVVNLYVKNLDDAIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F +E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E N VY+ N ++ L F G
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKF--GPT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D KGFGFV + H +A A+ N + L GK I K
Sbjct: 218 LSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSR--AGPILSIRVCRDVITPHSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQR 89
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI 261
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 17 LYQYHPSLLAAP-QIEPILSGNLPPRFDAST--------CRSVYVGNIHPQVTNALLQEV 67
+ +Y P+ P P ++G+ F A++ +++++G + + ++ V
Sbjct: 1 MAEYTPTGPTGPVSTAPNMNGSGDAGFSATSQMSASNEAAKTLWMGEMEGWMDENFIKNV 60
Query: 68 FSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAY 121
F + ++ + +D++S Y F++ F AA +TLNG + + K+NWA
Sbjct: 61 FQTVLSVDVQVKVIRDRNSGNAGYCFIE-FPTPDAAQKALTLNGTPVPNSSRVFKLNWAS 119
Query: 122 ASS---QREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFG 177
+R+D +++FVGDL PEV + L + F S FP+C A++M D TG+SRG+G
Sbjct: 120 GGGLVDRRDDRGPEYSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYG 179
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISD- 236
FV F ++ + Q A+ ++ G + GNR +R + A + S + ++ I+
Sbjct: 180 FVRFSDESEQQRALVEMQGVYCGNRAMRISTATPKSRS--HQFGHHGHGATQMMPPIAGH 237
Query: 237 -----------GQEKSNED-APEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
GQ+ N+ AP N +P TTV+VG LS VT +L F G I
Sbjct: 238 PGPMWGVPSYYGQQPFNQHIAPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEI 295
Query: 282 EDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
V++ KG GFV++ A +AI + ++ SWG
Sbjct: 296 TYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 339
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E AQ AI +NG L +R++ S E++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGH----FKSRREREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQGLQDLFSRF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 136/297 (45%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ D S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAITTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F+ E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSRFGKMLSVKVMRDD-SGHSRGFGFVNFQKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + +L Q++ Q +YV NL + L +
Sbjct: 270 V----ERQSELKRRFEQLK------QDRLTRY------QGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RIL KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYVALAQR 370
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 8/186 (4%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDE 218
+E
Sbjct: 270 MERQNE 275
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLRELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSI 261
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ANKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDC-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 363
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 147/313 (46%), Gaps = 36/313 (11%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS---YGFVDYFDRRSAALA 101
+ +++++G + P + +++++S+ G K+I+ +S Y FV+ F AA
Sbjct: 45 SAKTLWMGELEPWMDENFIKQIWSTVCGETVNVKVIRDRQSGNAGYCFVE-FPSSEAATK 103
Query: 102 IVTLNGRHIFG--QPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV- 155
+ LNG + + K+NWA +R++ +++FVGDL PEV + L + F
Sbjct: 104 ALGLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEYSIFVGDLGPEVNEFVLVSLFQAR 163
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
FP+C A++M D TG+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A S
Sbjct: 164 FPSCKSAKIMTDAMTGQSRGYGFVRFTDESDQQRALVEMQGVYCGNRPMRISTATPKTRS 223
Query: 216 GDE--KQSSDSKSVVELTNGISDGQEKSN-------EDAPEN--------------NPQY 252
+ Q + +T + Q N + P N +P
Sbjct: 224 HQQYGNQGPHGAGPMNMTPPAQNMQWGMNPYGYQQPQAPPPNTAFNNPMQPMNQFTDPNN 283
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 284 TTVFVGGLSGYVTEDELRSFFQGF--GDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQG 341
Query: 313 RILCGKPIKCSWG 325
+ ++ SWG
Sbjct: 342 YPIGNSRVRLSWG 354
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI 261
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVI 261
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 102/175 (58%), Gaps = 9/175 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 7 TAYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 65
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L FS F ++
Sbjct: 66 VLNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLHDTFSAFGVIVTNP 123
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
++M D +TG SRGFGF+S+ + E + +AI +NG++L NRQI ++A K T G+
Sbjct: 124 KIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLCNRQITVSYAYKKDTKGE 178
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 40/203 (19%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 9 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLN 68
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ D N +
Sbjct: 69 MIKLYGKPIRVN-----------KASQDKKSL----------------DVGAN------L 95
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V LH F A V + + ++ RD +GFGF+ Y + + AI+
Sbjct: 96 FIGNLDPDVDEKLLHDTFSAFGV-IVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEA 154
Query: 310 GNARILCGKPIKCSWGSKPTPPG 332
N + LC + I S+ K G
Sbjct: 155 MNGQYLCNRQITVSYAYKKDTKG 177
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIRGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E AQ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDNHG--SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQK 268
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDNHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AIVT+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAIVTMNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L R
Sbjct: 270 ---------------VERQNELKRRFEQMKQDR-LTRYQGVNLYVKNLDDSIDDEKLRRE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 142/296 (47%), Gaps = 23/296 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVT 104
++++G + P + ++ ++ G K+I+ + Y FVD F +AA ++
Sbjct: 60 TLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVD-FSSAAAAGKALS 118
Query: 105 LNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFP 157
LNG + + K+NWA A R++ +++FVGDL PEV + L + F S FP
Sbjct: 119 LNGTPMPNTTRAFKLNWATGGGLADRGRDERGPEYSIFVGDLGPEVNEYVLVSLFQSRFP 178
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA---KGAT 214
+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A KG
Sbjct: 179 SCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGPG 238
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE-----NNPQYTTVYVGNLSSEVTSVDL 269
G + + + G AP+ +P TTV+VG LS VT +L
Sbjct: 239 VGPGGMGMPGPAGIYPPAAMG-GPPMGFYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDEL 297
Query: 270 HRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 298 RSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++H + L F TG + K+I+ ++ YGFV+++ +A +
Sbjct: 153 KTIWVGDLHYWMDENYLHTCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLD 212
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G HI QP ++NWA S +R D + ++FVGDL+ +V D L FS +
Sbjct: 213 GFAG-HIMPNTDQPFRINWASFSMGDRRSDIASDHSIFVGDLASDVNDTALLETFSSRYS 271
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSG 216
+ A+V+ D TGRS+G+GFV F + + +A+ ++NG + R +R A + ++
Sbjct: 272 SVKGAKVVIDANTGRSKGYGFVRFGDDSEKTNAMTEMNGVYCSTRPMRIGPATPRKSSGT 331
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
S ++S +LTN TTV+VG L V+ DL + F
Sbjct: 332 SGSTGSSARSDGDLTN--------------------TTVFVGGLDPNVSEDDLKQTFSQY 371
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I V++ K GFV++ A A+Q N + + ++ SWG P
Sbjct: 372 --GEISSVKIPVGKQCGFVQFLQRKNAEDALQGLNGSTIGKQTVRLSWGRNP 421
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 23/186 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D ++ S++VG++ V + L E FSS ++G K++ + YGFV + D
Sbjct: 239 RSDIASDHSIFVGDLASDVNDTALLETFSSRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 298
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA------------YASSQREDTSGHFNVFVGDLSPE 143
A+ +NG + +P+++ A +S++ + + VFVG L P
Sbjct: 299 SEKTNAMTEMNGVYCSTRPMRIGPATPRKSSGTSGSTGSSARSDGDLTNTTVFVGGLDPN 358
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 359 VSEDDLKQTFSQYGEISSVKIPVGKQCG------FVQFLQRKNAEDALQGLNGSTIGKQT 412
Query: 204 IRCNWA 209
+R +W
Sbjct: 413 VRLSWG 418
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++++ N+ + N L + FS+ G + CK++ + S YGFV + + +A AI +N
Sbjct: 104 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 163
Query: 107 GRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
G + + + V + +RE G NV++ + ++ D L F F
Sbjct: 164 GMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALS 223
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+
Sbjct: 224 VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT 278
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ ++ Q++ Q +YV NL + L + F GTI
Sbjct: 279 ELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKEFSPF--GTI 324
Query: 282 EDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 325 TSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 374
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 130/294 (44%), Gaps = 48/294 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ ++ I + Y +V+Y A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALET 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT-------SGHFNVFVGDLSPEVTDATLFACFSVFP 157
LN I G+P+++ W SQR+ + G N+F+ +L + + L+ FS F
Sbjct: 72 LNFDVIKGRPVRIMW----SQRDPSLRKSGVGGGVGNIFIKNLDKSIDNKALYDTFSAFG 127
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S
Sbjct: 128 NILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRK 181
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH--- 274
E+++ E TN VY+ N ++ L F
Sbjct: 182 EREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFG 219
Query: 275 -ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 PALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 272
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 147/295 (49%), Gaps = 23/295 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD----KSSYGFVDYFDRRSAALAIVT 104
++++G + P VT A +Q+V+++ G KLI+ + Y FV++ A+ A+ +
Sbjct: 94 TLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-S 152
Query: 105 LNGRHIFG--QPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+N + I G K+NWA RE + + +++FVGDLSP V + +++ F S + +
Sbjct: 153 MNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNS 212
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
C A++M D +T SRG+GFV F ++ D +SA+ ++ G+ G+R IR AT +
Sbjct: 213 CKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGL----ATPKSK 268
Query: 219 KQSSDSKSVVELTN---GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+VV ++ G + + A N +TV+VG LS V+ +L F
Sbjct: 269 AHVFSPVNVVPVSMPPVGFYSAAQPVPQFADTAN---STVFVGGLSKFVSEEELKYLFQN 325
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I V++ KG GFV++ A +AI L I+ SWG P
Sbjct: 326 F--GEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQNP 378
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 34/208 (16%)
Query: 121 YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVS 180
Y SS+ E+ +++G+L P VT+A + ++ +++ ++ TG + G+ FV
Sbjct: 81 YGSSRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVE 140
Query: 181 FRNQEDAQSAINDLNGKWLG-NRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQE 239
F + +A SA++ N G N + NWA+ G +E
Sbjct: 141 FASPHEASSAMSMNNKPIPGTNHLFKLNWASGGGL-----------------------RE 177
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLH-----RHFHALCVGTIEDVRVQRDKGFGF 294
KS A E +++VG+LS V D++ R+ + D + +G+GF
Sbjct: 178 KSISKASE-----YSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGF 232
Query: 295 VRYSTHPEAALAIQMGNARILCGKPIKC 322
VR++ + A+ +I +PI+
Sbjct: 233 VRFTDENDQKSALAEMQGQICGDRPIRV 260
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGSRGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +GRSRGFGFV++ N E+AQ A+ ++NGK + R + A K
Sbjct: 211 FSAFGNTLSVKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q + ++ QE+ N Q +YV NL + L +
Sbjct: 270 I----ERQGELKRKFEQIK------QERINRY------QGVNLYVKNLDDGIDDDRLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSTKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+Y+G++HP VT A+L E FS GP+ C+ I +S Y ++++ A A+ T
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG+GFV F QE A AI +NG L +R++ S E++
Sbjct: 128 CKVVCDEYG--SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH----FKSRREREL 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V+E TN VY+ N ++ L F A G
Sbjct: 182 EYGAKVMEFTN----------------------VYIKNFGEDMDDKRLKEIFSAF--GNT 217
Query: 282 EDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V R +GFGFV Y H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQK 268
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL ++ L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+N I G+P+++ W+ + S R+ SG N+FV +L + + L+ S F +
Sbjct: 72 MNFDVIKGKPVRIMWSQHDPSLRK--SGVGNIFVKNLDKSINNKALYDTVSAFGNILSCK 129
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 130 VVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAEL 183
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALCVG 279
E N VY+ N ++ L F AL V
Sbjct: 184 GAKAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 222 VMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQK 268
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + D+ +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSW 324
+A A+ N ++ GKP++ W
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMW 86
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 38/329 (11%)
Query: 32 PILSGNLPPRFDASTC----------RSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLI 80
P ++GN F A +++++G + + ++ VF++ G K+I
Sbjct: 49 PTMNGNSEANFQAPAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVI 108
Query: 81 KKDKSS---YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGH 132
+ S Y F++ F AA + LNG + + K+NWA +R+D
Sbjct: 109 RDRNSGNAGYCFIE-FATPEAAQKALNLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPE 167
Query: 133 FNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
+++FVGDL PEV + L + F S FP+C A++M D TG+SRG+GFV F ++ D Q A+
Sbjct: 168 YSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRAL 227
Query: 192 NDLNGKWLGNRQIRCN----------WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
++ G + GNR +R + + A + + + L G+ S
Sbjct: 228 VEMQGVYCGNRPMRISTATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYS 287
Query: 242 --NEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
N P N +P TTV+VG LS VT +L F G I V++ KG GFV+
Sbjct: 288 GFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQ 345
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ A +AI + ++ SWG
Sbjct: 346 FVHRHAAEMAINQMQGYPIGNSRVRLSWG 374
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N++ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE T NV++ + + D TL
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ G+S+GFGFVSF EDAQ A++++NGK L + I A K
Sbjct: 211 FGRFGQILSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK- 268
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
D++ + ++T Q+KS Q +YV NL + L +
Sbjct: 269 ---KDDRHTELKHKFEQVT------QDKSIRY------QGINLYVKNLDDGIDDERLQKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQR 370
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FSS GP+ + +I + Y V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG NVF+ +L+ + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G GFV F +E A+ AI +NG L +R++ +
Sbjct: 128 CKVVSDENG--SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVG-----------RFK 174
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
S + EL G + +T VY+ N + L+ F G I
Sbjct: 175 SQKEREAELGTGTKE---------------FTNVYIKNFGDRMDDETLNGLFGRF--GQI 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D KGFGFV + H +A A+ N + L GK I K
Sbjct: 218 LSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK 268
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|428172560|gb|EKX41468.1| hypothetical protein GUITHDRAFT_141953 [Guillardia theta CCMP2712]
Length = 439
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 141/286 (49%), Gaps = 15/286 (5%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNG 107
R ++V + P V LL +F + G L C++I +G+ D+ D SA++A+ +LNG
Sbjct: 7 RCLHVTGLSPLVDETLLSSIFGAFGQLTSCRIIPDANGIHGYCDFADFSSASVALASLNG 66
Query: 108 RHIFGQPIKVNWAY-ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
R + G P+ V+W + +EDTS H VFVG++ + + LF F+ F CSD+R++
Sbjct: 67 REVLGSPLNVSWHLQQAGPKEDTSNHITVFVGNIGDIIDEYMLFESFAHF-NCSDSRIIR 125
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
G+ G+GFV+ R Q + + G + G S D + +D +
Sbjct: 126 GDD-GKCLGYGFVTIRTQVTEFGLLLQRFDRSAGTGGCKRRCCCHGWRSVDGEALADVNA 184
Query: 227 VVELTNG---ISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
+D Q + + A E+N TTV+VGNL + L + F G I++
Sbjct: 185 AANRPPDPPPSTDAQTVAKQ-ASESN---TTVHVGNLVGTESEEALKKAFAKH--GEIDN 238
Query: 284 VRVQRDKGFGFVRYSTHPEAALAIQMGNARILCG--KPIKCSWGSK 327
VRV K F FV Y+TH AA AI N G +P+KC+W ++
Sbjct: 239 VRVP-GKNFAFVTYTTHKAAAAAIAALNGTKPPGLTRPLKCTWAAE 283
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAAL 100
++ S+YVG + P V+ ALL ++FS G + ++ I K Y +V++ D +
Sbjct: 39 TSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKT 98
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
AI LN I G P ++ W+ S R+ SG N+F+ +L P++ + L FSVF
Sbjct: 99 AIEKLNYAPIKGVPCRIMWSQRDPSMRKKGSG--NIFIKNLHPDIDNKALHDTFSVFGNI 156
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
++ D+ G SRGFGFV F + E A+ AI+ +NG L +++ + A+ + D +
Sbjct: 157 LSCKIATDE-AGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEV---YVAQHVSKKDRQ 212
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
D E +T VYV N+ + + F VG
Sbjct: 213 SKLD-----------------------EAKANFTNVYVKNIHPDTGDEEFEEFFTK--VG 247
Query: 280 TIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +++D +GFGFV Y H +AA A++ N G+ + K
Sbjct: 248 PITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEELNETDFKGQTLHVGRAQK 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
+VYV NIHP + +E F+ GP+ L K ++ +GFV+Y + AA A+ L
Sbjct: 224 NVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEEL 283
Query: 106 NGRHIFGQPIKVNWAYASSQR----------------EDTSGHFNVFVGDLSPEVTDATL 149
N GQ + V A +R E G N+FV +L + D L
Sbjct: 284 NETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQG-VNLFVKNLDDTIDDQKL 342
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F+ + T + +VM + G+S+GFGFV F E+A AI + N + + + + A
Sbjct: 343 EEEFAPYGTITSVKVMRSE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIA 401
Query: 210 AK 211
+
Sbjct: 402 QR 403
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 40/203 (19%)
Query: 123 SSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFR 182
SQ+ +TS +++VG+L P V++A L+ FS + S RV D T S G+ +V+F
Sbjct: 33 ESQKVETSSA-SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFN 91
Query: 183 NQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSN 242
+ E ++AI LN + R W+ + + K+ S +
Sbjct: 92 DHEAGKTAIEKLNYAPIKGVPCRIMWSQRDPSM--RKKGSGN------------------ 131
Query: 243 EDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRY 297
+++ NL ++ + LH F G I ++ D +GFGFV +
Sbjct: 132 ------------IFIKNLHPDIDNKALHDTFSVF--GNILSCKIATDEAGNSRGFGFVHF 177
Query: 298 STHPEAALAIQMGNARILCGKPI 320
A AI N +L G+ +
Sbjct: 178 EDDEAAKEAIDAINGMLLNGQEV 200
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 138/301 (45%), Gaps = 32/301 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S +V++ N+ + N + + FS+ G + C++ ++++ YGFV +
Sbjct: 91 PSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILSCRVATDEEAASKGYGFVHFETEE 150
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFA 151
+A AI +NG + + + V +RE G NV++ + E+ D L
Sbjct: 151 AANKAISKVNGMLLNNKKVYVGKFIPRKEREKMLGDKARCFTNVYIKNFGDELDDDKLLV 210
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F + + A+VM D +G++RGFGFVSF + A+ A+ +LNGK +G R + A K
Sbjct: 211 IFEKYGKITSAKVMTDD-SGKNRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQK 269
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHR 271
A E+QS + +L QE+ N Q +YV NL + L +
Sbjct: 270 KA----ERQSELKRHFEQLK------QERLNRY------QGVNLYVKNLDDALDDERLRK 313
Query: 272 HFHALCVGTIEDVRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
F G I +V R KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 314 EFGPF--GNITSAKVMTDANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQ 371
Query: 327 K 327
+
Sbjct: 372 R 372
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP+VT A+L E FS+ GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I +PI++ W SQR+ + SG NVF+ +L + + ++ FS F
Sbjct: 72 MNFDAIKNKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKTIDNKAMYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
RV D++ S+G+GFV F +E A AI+ +NG L N+++ + K + ++
Sbjct: 128 CRVATDEEAA-SKGYGFVHFETEEAANKAISKVNGMLLNNKKV---YVGKFIPRKEREKM 183
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
K+ +T VY+ N E+ L F G I
Sbjct: 184 LGDKARC-----------------------FTNVYIKNFGDELDDDKLLVIFEKY--GKI 218
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V D +GFGFV + A A++ N + + G+P+ K
Sbjct: 219 TSAKVMTDDSGKNRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQK 269
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L EVT L F L + D+ +R G+ +V + +A
Sbjct: 6 PNYPMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N + KPI+ W +
Sbjct: 66 ERALDTMNFDAIKNKPIRIMWSQR 89
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N +L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL ++ L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + SSY +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPKDAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + DV +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQR 89
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 131/291 (45%), Gaps = 45/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+Y+G++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVVKGKPIRIMW----SQRDPSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ L +F VG
Sbjct: 182 EFGAKAREFTN----------------------VYIKNFGDDMDDERLREYFEQY-VGKT 218
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D KGFGFV + H +A A+ N + L G+ I K
Sbjct: 219 LSVKVMMDEGGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQK 269
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 140/301 (46%), Gaps = 33/301 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRRSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEFGAKAREFTNVYIKNFGDDMDDERLREY 210
Query: 153 FS--VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F V T S +VM D+ G+S+GFGFVSF EDAQ A++++N K L R I A
Sbjct: 211 FEQYVGKTLS-VKVMMDE-GGKSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQ 268
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
K A E+Q+ + L QE+ ++ Q +YV NL + L
Sbjct: 269 KKA----ERQTELKRKFEMLK------QERMSKY------QGVNLYVKNLDDNINDERLW 312
Query: 271 RHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
+ F GTI +V R +GFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 313 KEFSPF--GTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVALAQ 370
Query: 327 K 327
+
Sbjct: 371 R 371
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L + FS G + K++ ++ S +GFV + A A+ +N
Sbjct: 296 NLYVKNLDDNINDERLWKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMN 355
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR I +P+ V A +R+
Sbjct: 356 GRIIGSKPLYVALAQRKEERK 376
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E+FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+N I GQPI++ W++ SG N+F+ +L + + L+ FS F + ++V
Sbjct: 72 MNFEMIKGQPIRIMWSHRDPGLR-RSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKV 130
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
++++ SRGFGFV F E AQ AIN +NG L +R++
Sbjct: 131 VYNEHG--SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFV------------------ 170
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
G ++K + +T +YV NL ++ L F G + V
Sbjct: 171 --------GHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDLFSQF--GKTQSV 220
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD +GFGF+ + H EA A+ N + + G+ + K
Sbjct: 221 KVMRDSNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQK 268
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 26/304 (8%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ + P S ++++ N+ + N L + FS+ G + K++ + S +GFV
Sbjct: 84 IMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHGSRGFGFV 143
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVT 145
+ +A AI T+NG + + + V + +RE G N++V +L ++
Sbjct: 144 HFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLRVDMD 203
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
+ L FS F +VM D G+SRGFGF++F E+AQ A++ +NGK + + +
Sbjct: 204 EQGLQDLFSQFGKTQSVKVMRD-SNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLY 262
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K A E+Q+ + ++ QE+ +N Q +YV NL +
Sbjct: 263 VGRAQKRA----ERQNELKRRFEQMK------QER------QNRYQGVNLYVKNLDDSIN 306
Query: 266 SVDLHRHFHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
L F V T V + KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 307 DDRLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVA 366
Query: 324 WGSK 327
+
Sbjct: 367 LAQR 370
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 42/201 (20%)
Query: 128 DTSGH----FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
DT GH +++VGDL P+VT+A L+ FS T RV D T RS G+ +++F+
Sbjct: 2 DTRGHGCSLSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 184 QEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
DA+ A++ +N + + + IR W S+
Sbjct: 62 PADAERALDTMNFEMIKGQPIRIMW--------------------------------SHR 89
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYST 299
D +++ NL + + + L+ F G+I +V + +GFGFV + T
Sbjct: 90 DPGLRRSGMGNIFIKNLENSIDNKALYDTFSTF--GSILSSKVVYNEHGSRGFGFVHFET 147
Query: 300 HPEAALAIQMGNARILCGKPI 320
H A AI N +L + +
Sbjct: 148 HEAAQKAINTMNGMLLNDRKV 168
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L+EVFS+ G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESSHSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGTKPLYVALAQRKEERK 375
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
+++YVG+L +VT L+ F +GTI +RV RD G+ ++ + +A A
Sbjct: 11 SSLYVGDLHPDVTEAMLYEMFSP--IGTILSIRVCRDVATRRSLGYAYINFQQPADAERA 68
Query: 307 IQMGNARILCGKPIKCSWGSK 327
+ N ++ G+PI+ W +
Sbjct: 69 LDTMNFEMIKGQPIRIMWSHR 89
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVMKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDGNLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 261
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVMKGKPIRIMWSQR 89
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +R+ RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRICRDLITSGSSNYAYVNFQHTK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP+V+ A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALET 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + LF FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F ++ A+ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVVCDEHG--SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ + L R F G
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDLRLKRLFGKF--GPS 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D KGFGFV + H +A A++ N + L GK I K
Sbjct: 218 LSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQK 268
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + R +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSKGYGFVHFETRDA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G S+GFGFV+F EDAQ A+ ++NGK L ++I A K
Sbjct: 211 FGKFGPSLSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L Q++ Q +YV NL + L +
Sbjct: 270 G----ERQTELKRKFEQLK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R+KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQR 370
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y T +YVG+L EV+ L+ F L + D+ +R G+ +V + +A
Sbjct: 6 PSYPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A++ N ++ GKP++ W +
Sbjct: 66 ERALETMNFDVIKGKPVRIMWSQR 89
>gi|21593441|gb|AAM65408.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 30 IEPILSGNLPPRFDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK--- 84
I P + NL + A + +VYVG + Q++ LL E+F GP+ + KD+
Sbjct: 5 IAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVTN 63
Query: 85 --SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSP 142
+YGF++Y A AI LN + G+PI+VN A + D N+F+G+L P
Sbjct: 64 LHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGA--NLFIGNLDP 121
Query: 143 EVTDATLFACFSVFPT-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
+V + L+ FS F S+ ++M D TG SRGFGF+S+ + E + +AI + G++L N
Sbjct: 122 DVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLSN 181
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
RQI ++A K T G E+ + ++ ++ TN
Sbjct: 182 RQITVSYAYKKDTKG-ERHGTPAERLLAATN 211
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG L ++++ L+ F + V D+ T + +GF+ +R++EDA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS+ N
Sbjct: 87 NMIKLHGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
+ L + I S+ K
Sbjct: 173 SMTGQYLSNRQITVSYAYK 191
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N++ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 66 PSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGHGFVHFETEEA 125
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE T NV++ + + D TL
Sbjct: 126 AERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGL 185
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ G+S+GFGFVSF EDAQ A++++NGK L + I A K
Sbjct: 186 FGRFGQILSVKVMTDE-GGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK- 243
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
D++ + ++T Q+KS Q +YV NL + L +
Sbjct: 244 ---KDDRHTELKHKFEQVT------QDKSIRY------QGINLYVKNLDDGIDDERLQKE 288
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 289 FSPF--GTITSTKVMTEGGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQR 345
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 120/277 (43%), Gaps = 46/277 (16%)
Query: 63 LLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVN 118
+L E FSS GP+ ++ I + Y V++ A A+ T+N I G+P+++
Sbjct: 1 MLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPVRIM 60
Query: 119 WAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRG 175
W SQR+ + SG NVF+ +L+ + + L+ FS F +V+ D+ S+G
Sbjct: 61 W----SQRDPSLRRSGVGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENG--SKG 114
Query: 176 FGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGIS 235
GFV F +E A+ AI +NG L +R++ + S + EL G
Sbjct: 115 HGFVHFETEEAAERAIEKMNGMLLNDRKVFVG-----------RFKSQKEREAELGTGTK 163
Query: 236 DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----K 290
+ +T VY+ N + L+ F G I V+V D K
Sbjct: 164 E---------------FTNVYIKNFGDRMDDETLNGLFGRF--GQILSVKVMTDEGGKSK 206
Query: 291 GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GFGFV + H +A A+ N + L GK I K
Sbjct: 207 GFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK 243
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +R+ RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRICRDLITSGSSNYAYVNFQHTK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVMKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDGNLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 261
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L R
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRRE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVMKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L+ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +R+ RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRICRDLITSGSSNYAYVNFQHTK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|15224186|ref|NP_179441.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
gi|4218014|gb|AAD12222.1| putative spliceosome associated protein [Arabidopsis thaliana]
gi|23297611|gb|AAN12991.1| putative spliceosome-associated protein [Arabidopsis thaliana]
gi|330251682|gb|AEC06776.1| splicing factor 3B subunit 4 [Arabidopsis thaliana]
Length = 363
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 29 QIEPILSGNLPPRFDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-- 84
+I P + NL + A + +VYVG + Q++ LL E+F GP+ + KD+
Sbjct: 4 RIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVT 62
Query: 85 ---SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLS 141
+YGF++Y A AI LN + G+PI+VN A + D N+F+G+L
Sbjct: 63 NLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVNKASQDKKSLDVGA--NLFIGNLD 120
Query: 142 PEVTDATLFACFSVFPT-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P+V + L+ FS F S+ ++M D TG SRGFGF+S+ + E + +AI + G++L
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
NRQI ++A K T G E+ + ++ ++ TN
Sbjct: 181 NRQITVSYAYKKDTKG-ERHGTPAERLLAATN 211
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 82/199 (41%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG L ++++ L+ F + V D+ T + +GF+ +R++EDA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS+ N
Sbjct: 87 NMIKLHGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
+ L + I S+ K
Sbjct: 173 SMTGQYLSNRQITVSYAYK 191
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +R+ RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRICRDLITSGSSNYAYVNFQHTK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N +L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKVLYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F + G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELF--IQFGKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FIQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 43 DASTCRS----VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRR 96
D ST +S +++ N+ + N L + F + GP+ CK+ +D S YGFV +
Sbjct: 117 DPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAHQDGRSKGYGFVHFETDE 176
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTDATLFACF 153
+A LAI +NG + G+ + V S R +G NVFV +L PE+ + + F
Sbjct: 177 AANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHF 236
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F ++ +M D+ +S+GFGFV+F + E A++A+ +N LG+R I A K A
Sbjct: 237 STFGVITNVVIMKDEND-KSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKA 295
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
E++ + +EK E + Q +YV NL + L + F
Sbjct: 296 ----EREQILRRQF----------EEKRMEQFQKY--QGANLYVKNLDDSIDDETLKQEF 339
Query: 274 HALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I +V RD KGFGFV +++ EA+ A N ++ GKPI + +
Sbjct: 340 SRY--GNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 396
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 126/287 (43%), Gaps = 52/287 (18%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++ V L +FS G + ++ + + YG+V+Y A A+
Sbjct: 39 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 98
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN I G+ I++ W++ S R+ SG N+F+ +L + + L F F +
Sbjct: 99 LNYTPINGKTIRIMWSHRDPSTRK--SGVGNIFIKNLDESIDNKALHDTFIAFGPILSCK 156
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
+ + GRS+G+GFV F E A AI +NG L +++ + AK
Sbjct: 157 IA--HQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKV---FVAKFV---------- 201
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
++S+ A ++T V+V NL E+ ++ HF G I +
Sbjct: 202 ---------------KRSDRLAATGETKFTNVFVKNLDPEMAEEEIKEHFSTF--GVITN 244
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAI-------QMGNARILCGK 318
V + +D KGFGFV + PEAA A Q+G+ I G+
Sbjct: 245 VVIMKDENDKSKGFGFVNFD-DPEAARAAVETMNNSQLGSRTIYVGR 290
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
++YVG+L V L F + G + VRV RD G+G+V YS+ +A A
Sbjct: 38 VSLYVGDLDETVAETQLFTIFSQM--GLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 95
Query: 307 IQMGNARILCGKPIKCSWGSK 327
++ N + GK I+ W +
Sbjct: 96 MEALNYTPINGKTIRIMWSHR 116
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDENLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKII 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P VT A+L E+F+ GP+ ++ + + Y +V+Y + A+
Sbjct: 50 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 109
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I +P ++ W SQR+ +G N+F+ +L + + L F+ F T
Sbjct: 110 LNYSLIKNRPCRIMW----SQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGTVLS 165
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ TGRS+G+GFV + E A++AI +NG L ++++ G
Sbjct: 166 CKVATDE-TGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYV---------GHHISR 215
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS---VDLHRHFHALCV 278
+ +S +E E Q+T +YV NL EVT ++L + + +
Sbjct: 216 KERQSKLE-----------------EMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTS 258
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I + KGFGFV + TH EA A+ N L GK + S K
Sbjct: 259 AVISVDEEGKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQK 307
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 32/292 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N+ + N L + F++ G + CK+ + YGFV Y +A AI +
Sbjct: 138 NIFIKNLDEAIDNKALHDTFAAFGTVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAV 197
Query: 106 NGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + + + V + +R E+ F N++V +L PEVT F + +
Sbjct: 198 NGMLLNDKKVYVGHHISRKERQSKLEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVT 257
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A + D++ G+S+GFGFV+F ++AQ A+++LN L +++ + A K A +E +
Sbjct: 258 SAVISVDEE-GKSKGFGFVNFETHDEAQKAVDELNDFELKGKKLFVSRAQKKAEREEELR 316
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S ++ +E + Q +Y+ NL +V L F GT
Sbjct: 317 RSYEQAKLEKLSKY----------------QGVNLYIKNLEDDVDDDKLRAEFEPF--GT 358
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +V RD KGFGFV +S+ EA A+ N +++ KP+ S +
Sbjct: 359 ITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQR 410
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 25/299 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVT 104
++++G + P + ++ VF S++G K+I+ S Y FV+ F AA +
Sbjct: 49 TLWMGELEPWMDENFIKGVFLSASGETVNVKVIRDKNSGNAGYCFVE-FQTADAATKALG 107
Query: 105 LNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
LNG + + K+NWA +R+D +++FVGDL PEV + L + F FP+
Sbjct: 108 LNGNPVPNSSRQFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 167
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-------- 210
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 168 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 227
Query: 211 KGATSGDEKQSSDSKSVVELTNGIS----DGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
G + NG+ G + + +P TTV+VG LS VT
Sbjct: 228 FGHGPHGGPMMGGGMPQQPMWNGMQGFAYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTE 287
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+L F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 288 DELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 344
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 84/224 (37%), Gaps = 54/224 (24%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDR 95
R D S++VG++ P+V +L +F + P I D S YGFV + D
Sbjct: 134 RDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPSCKSAKIMTDAMSGQSRGYGFVRFSDE 193
Query: 96 RSAALAIVTLNGRHIFGQPIKVN------------------------------------- 118
A+V + G + +P++++
Sbjct: 194 NDQQRALVEMQGVYCGNRPMRISTATPKNRGNHGFGHGPHGGPMMGGGMPQQPMWNGMQG 253
Query: 119 WAYASSQREDTSGHFN------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGR 172
+AY F VFVG LS VT+ L + F F + ++
Sbjct: 254 FAYGGYNPATQMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP------P 307
Query: 173 SRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+G GFV F ++ A+ AIN + G +GN ++R +W SG
Sbjct: 308 GKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 351
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 136/269 (50%), Gaps = 27/269 (10%)
Query: 68 FSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAY 121
F+ TG L+ KLI+ ++ YGF+++ A + T NG + Q ++NWA
Sbjct: 10 FAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVEQTYRLNWAS 69
Query: 122 ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRSRGFGFVS 180
A +R+DT + +FVGDL+ +VTD L F V +P+ A+V+ D+ T RS+G+GFV
Sbjct: 70 AGEKRDDTP-DYTIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVK 128
Query: 181 FRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEK 240
F + + A+ ++NG +R +R AA +G +++ ++ V +
Sbjct: 129 FGDPSEQARAMTEMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGV------------Q 176
Query: 241 SNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTH 300
S+ D P TT++VG L VT L + F G + V++ K GFV+++
Sbjct: 177 SDSD-----PSNTTIFVGGLDPSVTDDMLKQVFTPY--GDVVHVKIPVGKRCGFVQFANR 229
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSKPT 329
A A+ + ++ G+ ++ SWG P+
Sbjct: 230 ASADEALVLLQGTLIGGQNVRLSWGRSPS 258
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 25/180 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
+++VG++ VT+ +LQE F P ++G K++ + YGFV + D A A+
Sbjct: 81 TIFVGDLAADVTDYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMT 140
Query: 104 TLNGRHIFGQPIKVNWAYASS--------------QREDTSGHFNVFVGDLSPEVTDATL 149
+NG +P+++ A Q + + +FVG L P VTD L
Sbjct: 141 EMNGMVCSSRPMRIGPAANKKATGVQEKVPSAQGVQSDSDPSNTTIFVGGLDPSVTDDML 200
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
F+ + ++ ++ G FV F N+ A A+ L G +G + +R +W
Sbjct: 201 KQVFTPYGDVVHVKIPVGKRCG------FVQFANRASADEALVLLQGTLIGGQNVRLSWG 254
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 39/182 (21%)
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN--RQIR 205
T+ ACF+ +++ D++TG+ +G+GF+ F + A+ + NG + N + R
Sbjct: 5 TVSACFAPTGELQSVKLIRDKQTGQLQGYGFIEFTSHAGAERVLQTYNGAMMPNVEQTYR 64
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
NWA+ G EK+ ++ P Y T++VG+L+++VT
Sbjct: 65 LNWASAG-----EKR--------------------------DDTPDY-TIFVGDLAADVT 92
Query: 266 SVDLHRHFH-----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
L F + D R KG+GFV++ E A A+ N + +P+
Sbjct: 93 DYILQETFRVHYPSVKGAKVVTDKMTMRSKGYGFVKFGDPSEQARAMTEMNGMVCSSRPM 152
Query: 321 KC 322
+
Sbjct: 153 RI 154
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+++VG + P VT+ +L++VF+ G + K+ + GFV + +R SA A+V L G
Sbjct: 185 TIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRC--GFVQFANRASADEALVLLQGT 242
Query: 109 HIFGQPIKVNWAYASSQRE 127
I GQ ++++W + S R+
Sbjct: 243 LIGGQNVRLSWGRSPSNRQ 261
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 89 MNFDVMKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 198
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 199 ELGAKAKEFTN----------------------VYIKNFGEEVDDGNLKELFSQF--GKT 234
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 235 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 278
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 108 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 167
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 168 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 227
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 228 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 286
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L R
Sbjct: 287 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRRE 330
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 331 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 387
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 89 MNFDVMKGKPIRIMWSQR 106
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L+ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 312 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 371
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 372 GRIVGSKPLYVALAQRKEERK 392
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 130/275 (47%), Gaps = 24/275 (8%)
Query: 80 IKKDKSSYGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGHFN 134
+ + + Y FVD+ +AA A+ TLNG+ I +P K+NWA +R+D ++
Sbjct: 11 VCSNNAGYCFVDFQTPEAAAKAL-TLNGQMIPNSNRPFKLNWASGGGLQDRRDDRGPEYS 69
Query: 135 VFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+FVGDL PEV + L + F +P+C A++M D +G SRG+GFV F ++ + Q A+N+
Sbjct: 70 IFVGDLGPEVNEYVLVSLFQGKYPSCKSAKIMSDPISGMSRGYGFVRFSDESEQQRALNE 129
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTN------------GISDGQEKS 241
+ G + GNR +R + A SG + + G +
Sbjct: 130 MQGVYCGNRPMRISTATPKNKSGGGPGAGPMGGMHGGPGPVGMYGMGAPPLGYYGAPQPM 189
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHP 301
N+ NN TTV+VG LS VT +L F G I V++ KG GFV++
Sbjct: 190 NQFTDPNN---TTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRH 244
Query: 302 EAALAIQMGNARILCGKPIKCSWGSKPTPPGTSST 336
A +AI + ++ SWG G + T
Sbjct: 245 AAEMAINQMQGYPIGNSRVRLSWGRSQNNSGPAGT 279
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 38/329 (11%)
Query: 32 PILSGNLPPRFDA----------STCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLI 80
P ++GN F A +++++G + + ++ VF++ G K+I
Sbjct: 17 PTMNGNSEANFQAPAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVI 76
Query: 81 KKDKSS---YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGH 132
+ S Y F++ F AA + LNG + + K+NWA +R+D
Sbjct: 77 RDRNSGNAGYCFIE-FATPEAAQKALNLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPE 135
Query: 133 FNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
+++FVGDL PEV + L + F S FP+C A++M D TG+SRG+GFV F ++ D Q A+
Sbjct: 136 YSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRAL 195
Query: 192 NDLNGKWLGNRQIRCN----------WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
++ G + GNR +R + + A + + + L G+ S
Sbjct: 196 VEMQGVYCGNRPMRISTATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYS 255
Query: 242 --NEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
N P N +P TTV+VG LS VT +L F G I V++ KG GFV+
Sbjct: 256 GFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQ 313
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ A +AI + ++ SWG
Sbjct: 314 FVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 150/337 (44%), Gaps = 52/337 (15%)
Query: 43 DASTCRS----VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDR 95
D S+ RS +++ N+ + N L + FS+ G + CK+ D +GFV Y
Sbjct: 2 DPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEKE 61
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFAC 152
SA A+ +LNG I +P+ V +R+ D + NVFV +LS T L
Sbjct: 62 ESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKV 121
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + T + A VM G+SR F FV+F + +DA A+ +LNGK + +++ W
Sbjct: 122 FSGYGTITSAVVMIGM-DGKSRCFDFVNFESPDDAARAVEELNGKKINDKE----WYVGR 176
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E++ + E+S +DA + Q +Y+ NL +T L
Sbjct: 177 AQKKSEREMDLKRRF-----------EQSMKDAADKY-QGQNLYLKNLDDGITDDQLREL 224
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS- 326
F G I ++ RD KG GFV +ST EA+ A+ N +++ GKP+ ++
Sbjct: 225 FSNF--GKITSCKIMRDQNGVSKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQR 282
Query: 327 ---------------KPTPPGTSSTPLPP--PPAPHL 346
+P P S TP P PP P L
Sbjct: 283 KEDRKAMLQAQFSQMRPVPMTPSMTPRLPMYPPMPTL 319
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 42 FDASTCRSVYVGNIHPQVTNALLQEVFSSTGPL-EGCKLIKKDKSS--YGFVDYFDRRSA 98
FD + +V+V N+ T L +VFS G + +I D S + FV++ A
Sbjct: 96 FDKAKFNNVFVKNLSESTTKDDLVKVFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDA 155
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQRE-DTSGHF--------------NVFVGDLSPE 143
A A+ LNG+ I + V A S+RE D F N+++ +L
Sbjct: 156 ARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDG 215
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
+TD L FS F + ++M DQ G S+G GFVSF +E+A A+ ++NGK + +
Sbjct: 216 ITDDQLRELFSNFGKITSCKIMRDQ-NGVSKGSGFVSFSTREEASQALTEMNGKMISGKP 274
Query: 204 IRCNWAAK 211
+ +A +
Sbjct: 275 LYVAFAQR 282
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 35/289 (12%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSS-TGPLEGCKLIKKDK----SSYGFVDYFDRRSAA 99
S +++++G++ P T ++ +FSS G KLI+ + YGF+D+ + +A
Sbjct: 13 SAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQ 72
Query: 100 LAIVTLNGRHIFGQPIK--VNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
L + +LNG+ I G ++ +NW A +R + + ++VFVGDLSPEVTDA L A F +
Sbjct: 73 LVLDSLNGKPIEGTSLRYRLNWG-AGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKY 131
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+V+ + TG S+ FGF+ F ++++ A+ +NG R IR A K
Sbjct: 132 TSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATK----- 186
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
++ V+ G A +P TTV+VG ++ VT L F++
Sbjct: 187 --------RTSVQGQTG-----------AHATDPSNTTVFVGGINDSVTEKVLRDTFNS- 226
Query: 277 CVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
G I+ V +G FV ++ A I +CG ++ SWG
Sbjct: 227 -AGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWG 274
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 40/213 (18%)
Query: 125 QREDTSGHFNVFVGDLSPEVTDATLFACFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRN 183
Q E+ S +++GD+ P+ T+ + + FS + + +++ D+ G G+GF+ FRN
Sbjct: 8 QDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRN 67
Query: 184 QEDAQSAINDLNGKWLGNRQI--RCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
E AQ ++ LNGK + + R NW A G K
Sbjct: 68 HETAQLVLDSLNGKPIEGTSLRYRLNWGAGG---------------------------KR 100
Query: 242 NEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF-----HALCVGTIEDVRVQRDKGFGFVR 296
E APE +V+VG+LS EVT +L F L + + K FGF+R
Sbjct: 101 IEQAPE-----YSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIR 155
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ E A+ N CG+PI+ + +K T
Sbjct: 156 FGDEQERDEALTAMNGAECCGRPIRVAPATKRT 188
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVF-SSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIV 103
SV+VG++ P+VT+A L+ F + G K++ S+GF+ + D + A+
Sbjct: 108 SVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALT 167
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSG-------HFNVFVGDLSPEVTDATLFACFSVF 156
+NG G+PI+V A + + +G + VFVG ++ VT+ L F+
Sbjct: 168 AMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFN-- 225
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
A + T RG FV+F ++ A+ IN++ G + +R +W G
Sbjct: 226 ----SAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSG 277
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 142/298 (47%), Gaps = 29/298 (9%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGFVDYFDRR 96
P F S ++++ N+ V N L + FS+ G + CK+ +K + YGFV +
Sbjct: 121 PAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGNILSCKVAQDLKGESKGYGFVHFEKDE 180
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQRE-DTSGHF-NVFVGDLSPEVTDATLFACFS 154
SA LAI +NG + G+ + V S+R D+ F NVFV +L V+D + A F+
Sbjct: 181 SARLAIEKVNGMLLEGKKVYVGPFLRRSERSSDSEVKFTNVFVKNLDEAVSDDEVKAMFA 240
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
T + +M D + G+S+GFGF++F E A SA+ LNGK + +++ A K A
Sbjct: 241 EHGTVNSCIIMRDDE-GKSKGFGFINFEEPEQAASAVQALNGKDVNCKELYVGRAQKKA- 298
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
E+++ EL +S A Q +YV NL ++ L F
Sbjct: 299 ---EREAMLRAKFEEL---------RSERIA---KYQGMNLYVKNLHDDIDDETLRTEFS 343
Query: 275 ALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GTI +V D +GFGFV Y++ EA A+ N R++ GKPI + +
Sbjct: 344 QF--GTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYVALAQR 399
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 50/286 (17%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDY---FDRRSAALA 101
S+YVG++ VT A L EVFS GP+ ++ + + Y +V+Y D +A A
Sbjct: 39 SLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAERA 98
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+ LN + G+P+++ W++ SG N+F+ +L V + L FS F
Sbjct: 99 LDQLNYTPLVGRPMRIMWSHRDPAFR-KSGVGNIFIKNLDRSVDNKALHDTFSAFGNILS 157
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D K G S+G+GFV F E A+ AI +NG L +++ G ++S
Sbjct: 158 CKVAQDLK-GESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYV-----GPFLRRSERS 211
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
SDS+ ++T V+V NL V+ ++ F GT+
Sbjct: 212 SDSEV------------------------KFTNVFVKNLDEAVSDDEVKAMFAEH--GTV 245
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
+ RD KGFGF+ + +AA A+Q L GK + C
Sbjct: 246 NSCIIMRDDEGKSKGFGFINFEEPEQAASAVQA-----LNGKDVNC 286
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++YV N+H + + L+ FS G + K++ +GFV Y A A+ +
Sbjct: 323 NLYVKNLHDDIDDETLRTEFSQFGTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEM 382
Query: 106 NGRHIFGQPIKVNWAYASSQREDT 129
NGR I G+PI V A +QR D
Sbjct: 383 NGRMIKGKPIYV----ALAQRRDV 402
>gi|297831910|ref|XP_002883837.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329677|gb|EFH60096.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 108/190 (56%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAALAIV 103
++YVGN+ PQ++ LL E+F GP+ I KDK ++GFV + + A AI
Sbjct: 26 TIYVGNLSPQLSEDLLLELFVQAGPVVSV-FIPKDKVTNLQQTFGFVQFRNEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD-A 162
N ++G+PI+V A + D N+F+G+L P+V + L+ FS F +D
Sbjct: 85 VYNMIKLYGEPIRVKKASQDKKSLDVGA--NLFIGNLDPDVDEKMLYDTFSAFGMVADHP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D TG RGFGF+S+ + E + +AI ++G++L +RQI ++A K T G E+ +
Sbjct: 143 KIMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQYLSSRQITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ ++ TN
Sbjct: 202 QAERLLAATN 211
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 95/228 (41%), Gaps = 53/228 (23%)
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMW 166
G ++ GQ +A+ + +D + ++VG+LSP++++ L F +
Sbjct: 10 GANLLGQ-------HATERNQDAT----IYVGNLSPQLSEDLLLELFVQAGPVVSVFIPK 58
Query: 167 DQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKS 226
D+ T + FGFV FRN+EDA AI N L IR +K S D KS
Sbjct: 59 DKVTNLQQTFGFVQFRNEEDADYAIKVYNMIKLYGEPIRV-----------KKASQDKKS 107
Query: 227 VVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED-VR 285
+ N +++GNL +V L+ F A G + D +
Sbjct: 108 LDVGAN----------------------LFIGNLDPDVDEKMLYDTFSAF--GMVADHPK 143
Query: 286 VQRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ RD +GFGF+ Y + + AI+ + + L + I S+ K
Sbjct: 144 IMRDPDTGNPRGFGFISYDSFEASDAAIEAMSGQYLSSRQITVSYAYK 191
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVMKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDGNLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 261
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L R
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRRE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVMKGKPIRIMWSQR 89
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L+ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 89 MNFDVMKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 144
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 145 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 198
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 199 ELGAKAKEFTN----------------------VYIKNFGEEVDDGNLKELFSQF--GKT 234
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 235 LSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 278
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 108 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 167
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 168 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 227
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 228 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 286
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L R
Sbjct: 287 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRRE 330
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 331 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 387
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 28 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 87
Query: 309 MGNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 88 TMNFDVMKGKPIRIMWSQR 106
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L+ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 312 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 371
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 372 GRIVGSKPLYVALAQRKEERK 392
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 141/301 (46%), Gaps = 30/301 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++G + P + ++ ++ + G K+I+ + Y FVD+ +AA A+ +L
Sbjct: 62 TLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNAGYCFVDFSTPEAAAKAL-SL 120
Query: 106 NGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
NG+ I +P K+NWA A R++ +++FVGDL PEVT+ L F + + +
Sbjct: 121 NGQLIPNSNRPFKLNWASGGGLADRSRDERGPEYSIFVGDLGPEVTEFVLVQLFQNKYRS 180
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
A++M D +G SRG+GFV F ++ D Q A+ D+ G + GNR +R + A SG
Sbjct: 181 TKSAKIMSDPISGMSRGYGFVRFADEADQQKALTDMQGVYCGNRPMRISTATPKNKSGGP 240
Query: 219 KQSSDSK--------------SVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEV 264
S+ G + N+ NN TTV+VG LS V
Sbjct: 241 GGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAPQPMNQFTDPNN---TTVFVGGLSGYV 297
Query: 265 TSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
T +L F G I V++ KG GFV++ A +AI + ++ SW
Sbjct: 298 TEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSW 355
Query: 325 G 325
G
Sbjct: 356 G 356
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 83/215 (38%), Gaps = 53/215 (24%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
S++VG++ P+VT +L ++F + I D S YGFV + D A+
Sbjct: 155 SIFVGDLGPEVTEFVLVQLFQNKYRSTKSAKIMSDPISGMSRGYGFVRFADEADQQKALT 214
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTS---------------------------GHFN-- 134
+ G + +P++++ A ++ G++
Sbjct: 215 DMQGVYCGNRPMRISTATPKNKSGGPGGPGGMGMQQGGPGGPGMGMYSMGAPPMGYYGAP 274
Query: 135 -------------VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
VFVG LS VT+ L + F F + ++ +G GFV F
Sbjct: 275 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIP------PGKGCGFVQF 328
Query: 182 RNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A+ AIN + G +GN ++R +W SG
Sbjct: 329 VQRHAAEMAINQMQGYPIGNSRVRLSWGRSQNNSG 363
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 44/213 (20%)
Query: 122 ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSF 181
A + ++G +++G+L P + + + + + + +++ D+ +G + G+ FV F
Sbjct: 50 AGGDGQPSAGKTTLWMGELEPWIDENFVRSIWYNMGETVNVKMIRDKFSGNA-GYCFVDF 108
Query: 182 RNQEDAQSAINDLNGKWL--GNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQE 239
E A A++ LNG+ + NR + NWA+ G G++D
Sbjct: 109 STPEAAAKALS-LNGQLIPNSNRPFKLNWASGG--------------------GLAD--- 144
Query: 240 KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFG 293
+S + E P+Y+ ++VG+L EVT L + F T + ++ D +G+G
Sbjct: 145 RSRD---ERGPEYS-IFVGDLGPEVTEFVLVQLFQNKYRST-KSAKIMSDPISGMSRGYG 199
Query: 294 FVRYSTHPE--AALAIQMGNARILCG-KPIKCS 323
FVR++ + AL G + CG +P++ S
Sbjct: 200 FVRFADEADQQKALTDMQG---VYCGNRPMRIS 229
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 150/329 (45%), Gaps = 38/329 (11%)
Query: 32 PILSGNLPPRFDA----------STCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLI 80
P ++GN F A +++++G + + ++ VF++ G K+I
Sbjct: 17 PTMNGNSEANFQAPAALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGETVQVKVI 76
Query: 81 KKDKSS---YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGH 132
+ S Y F++ F AA + LNG + + K+NWA +R+D
Sbjct: 77 RDRNSGNAGYCFIE-FATPEAAQKALNLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPE 135
Query: 133 FNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
+++FVGDL PEV + L + F S FP+C A++M D TG+SRG+GFV F ++ D Q A+
Sbjct: 136 YSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRAL 195
Query: 192 NDLNGKWLGNRQIRCN----------WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
++ G + GNR +R + + A + + + L G+ S
Sbjct: 196 VEMQGVYCGNRPMRISTATPKTRTHQYGAHAPHAANPMMAPVPAHATNLQWGVPPQPYYS 255
Query: 242 --NEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
N P N +P TTV+VG LS VT +L F G I V++ KG GFV+
Sbjct: 256 GFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQ 313
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ A +AI + ++ SWG
Sbjct: 314 FVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 26/290 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F V T V + KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG NVF+ +L + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGH----FKSHREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ TN +YV NL ++ L F G +
Sbjct: 182 ELGAQALAFTN----------------------IYVKNLHVDMDEQGLQDLFFEF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQK 268
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + + L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETNEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L ++ + L
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D +G SRGFGFV+F E+AQ A++ +NGK + +Q+ A K
Sbjct: 211 FFEFGKMLSVKVMRD-NSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E+ +D + Q +YV NL ++ L
Sbjct: 270 G---------------ERQNELKRRFEQMKQDR-QTRYQGVNLYVKNLDDSISDEKLRTV 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N I+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQR 370
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
+++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 11 SSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERALD 70
Query: 309 MGNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 71 TMNFEVIKGQPIRIMWSQR 89
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S +GFV + + +
Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGHGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ATRAIQTMNGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D TGRS+GFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSRFGKTLSVKVMMDH-TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ + Q +YV NL + L +
Sbjct: 270 L----ERQSELKRKFEQMK------QERVSRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPVRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG GFV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGH----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
+E TN VY+ N ++ L F L
Sbjct: 182 EFGARAMEFTN----------------------VYIKNFGDDMDDNRLREIFSRFGKTLS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D R KGFGFV + H EA A+ N + + G+ + K
Sbjct: 220 VKVMMD-HTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQK 268
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L +VT L+ F L + D+ +R G+ +V + +A
Sbjct: 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ GKP++ W +
Sbjct: 66 ERALDTMNFDVIKGKPVRIMWSQR 89
>gi|213406019|ref|XP_002173781.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|212001828|gb|EEB07488.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 680
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 151/316 (47%), Gaps = 39/316 (12%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS------SYGFVDYFDRRSAALAI 102
++++G++ + A +Q++++S G KL++ S SY FV + ++A A+
Sbjct: 88 TLWMGDLESWMDAAFIQQLWASLGETVHVKLMRTKSSVSEGCVSYCFVQFSSPQAAEYAL 147
Query: 103 VTLNGRHI--FGQPIKVNWAY-------ASSQREDTSGHFNVFVGDLSPEVTDATLFACF 153
+ N I K+NWA A ++RE ++VFVGDL PE +A L+ F
Sbjct: 148 LRYNNTIIPRTHSVFKLNWATGGGIQHSAKTRREP---EYSVFVGDLDPETHEAELYHTF 204
Query: 154 -SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA--- 209
SV+P+C+ A+++ D TG SR +GFV F ++ + Q A++++ G R +R + A
Sbjct: 205 HSVYPSCTSAKIIIDPVTGMSRKYGFVRFSDEREQQRALSEMQGYLCHGRPLRISVASPR 264
Query: 210 AKGATSGDEKQSSDSKSV------------VELTNGI---SDGQEKSNEDAPENNPQYTT 254
++ + S D + + S G+ S + ++ +P TT
Sbjct: 265 SRTSISADSTTPTGAASTANGGAAASSSAVATGVTGVPSSSSSTRQPDQGLCSIDPFNTT 324
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARI 314
V+VG L S T DL HF G I ++++ KG GFV+Y+ A AI M +
Sbjct: 325 VFVGGLFSGATEKDLFYHFSPF--GNILNIKIPPGKGCGFVQYTEKAAAEKAITMMQGAL 382
Query: 315 LCGKPIKCSWGSKPTP 330
+ I+ +WG P
Sbjct: 383 VGPSHIRLAWGHNTLP 398
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S +GFV + + +
Sbjct: 91 PGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENGSRGHGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 ATRAIETMNGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D TGRS+GFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSRFGKTLSVKVMMDN-TGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+QS + ++ QE+ + Q +YV NL + L +
Sbjct: 270 L----ERQSELKRKFEQMK------QERVSRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPY--GTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPVRIMW----SQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRG GFV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGH----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
+E TN VY+ N ++ L F L
Sbjct: 182 EFGARAMEFTN----------------------VYIKNFGDDMDDNRLREIFSRFGKTLS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D R KGFGFV + H EA A+ N + + G+ + K
Sbjct: 220 VKVMMD-NTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQK 268
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D TG+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PTGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 33/299 (11%)
Query: 43 DASTCRS----VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRR 96
D ST +S +++ N+ + N L + F + GP+ CK+ +D S YGFV +
Sbjct: 116 DPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFGPILSCKIAHQDGRSKGYGFVHFETDE 175
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTDATLFACF 153
+A LAI +NG + G+ + V S R +G NVFV +L PE+ + + F
Sbjct: 176 AANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAATGETKFTNVFVKNLDPEMAEEEINEHF 235
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F ++ +M D+ +S+GFGFV+F + E A++A+ +N LG+R I A K A
Sbjct: 236 STFGVITNVVIMKDEND-KSKGFGFVNFDDPEAARAAVETMNNSQLGSRTIYVGRAQKKA 294
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
E++ + +EK E + Q +YV NL + L + F
Sbjct: 295 ----EREQILRRQF----------EEKRMEQFQKY--QGANLYVKNLDDSIDDETLKQEF 338
Query: 274 HALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I +V RD KGFGFV +++ EA+ A N ++ GKPI + +
Sbjct: 339 SRY--GNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 395
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 52/287 (18%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++ V L +FS G + ++ + + YG+V+Y A A+
Sbjct: 38 SLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAMEA 97
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN I G+ I++ W++ S R+ SG N+F+ +L + + L F F +
Sbjct: 98 LNYTPINGKTIRIMWSHRDPSTRK--SGVGNIFIKNLDESIDNKALHDTFIAFGPILSCK 155
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
+ + GRS+G+GFV F E A AI +NG L +++ + AK
Sbjct: 156 IA--HQDGRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKV---FVAKFV---------- 200
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
++S+ A ++T V+V NL E+ +++ HF G I +
Sbjct: 201 ---------------KRSDRLAATGETKFTNVFVKNLDPEMAEEEINEHFSTF--GVITN 243
Query: 284 VRVQRD-----KGFGFVRYSTHPEAALAI-------QMGNARILCGK 318
V + +D KGFGFV + PEAA A Q+G+ I G+
Sbjct: 244 VVIMKDENDKSKGFGFVNFD-DPEAARAAVETMNNSQLGSRTIYVGR 289
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
++YVG+L V L F + G + VRV RD G+G+V YS+ +A A
Sbjct: 37 VSLYVGDLDETVAETQLFTIFSQM--GLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRA 94
Query: 307 IQMGNARILCGKPIKCSWGSK 327
++ N + GK I+ W +
Sbjct: 95 MEALNYTPINGKTIRIMWSHR 115
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 45/296 (15%)
Query: 44 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAA 99
+ T S+YVG + P VT + L E FS G + ++ + K YG+V++ + +
Sbjct: 48 SETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGE 107
Query: 100 LAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVF 156
A+ LN I G ++ W SQR+ + SG N+F+ +L P + + TL FS F
Sbjct: 108 RALEELNYAEIKGVRCRLMW----SQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSF 163
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+V D+ G S+GFGFV + + E AQ+AI ++NG L R+I G
Sbjct: 164 GKVLSCKVATDE-NGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYV-----GPHLA 217
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+ + S + +++ YT V+V N +E T +L F +
Sbjct: 218 KKDRESRFQEMIK---------------------NYTNVFVKNFDTESTEDELRELFESY 256
Query: 277 CVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I + +Q D KGFGFV ++ H +A A++ N + GKP+ K
Sbjct: 257 --GPITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQK 310
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 127/296 (42%), Gaps = 36/296 (12%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S ++++ N+ P + N L + FSS G + CK+ + + +GFV Y
Sbjct: 132 PSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGNSKGFGFVHYESDE 191
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQRED-----TSGHFNVFVGDLSPEVTDATLFA 151
+A AI +NG + G+ I V A RE + NVFV + E T+ L
Sbjct: 192 AAQAAIENINGMLLNGREIYVGPHLAKKDRESRFQEMIKNYTNVFVKNFDTESTEDELRE 251
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F + + + D + G ++GFGFV+F +DA A+ LN K + + A K
Sbjct: 252 LFESYGPITSIHLQVDSE-GHNKGFGFVNFAEHDDAVKAVEALNDKEYKGKPLYVGRAQK 310
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV--YVGNLSSEVTSVDL 269
++ V ELT +K D E +Y +V ++ NL + L
Sbjct: 311 -----------KNERVHELT-------KKYEADRLEKLQKYQSVNLFIKNLDESIDDARL 352
Query: 270 HRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F GTI +V D +GFGFV ST EA AI N R++ KP+
Sbjct: 353 EEEFKPF--GTITSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPL 406
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 221 SSDSKSVVELTNGIS-DGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
S + +V E T S + E+SNE + + + ++YVG L VT DL+ F +G
Sbjct: 19 ESPATAVTEETPATSTEAAEESNESSTQASETLASLYVGELDPTVTESDLYEFFSP--IG 76
Query: 280 TIEDVRVQRDK------GFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
++ +RV RD G+G+V + + A++ N + G + W +
Sbjct: 77 SVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERALEELNYAEIKGVRCRLMWSQR 130
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ ++ I + Y V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + TL+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE+A+ AI +NG +L
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFL---------------------- 163
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
+D K V D Q + A E +T VY+ NL ++ L F AL
Sbjct: 164 NDHKVFVGRFKSRRDRQAELGARAKE----FTNVYIKNLGEDMDDERLQDLFGRFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A++ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQK 268
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 141/306 (46%), Gaps = 34/306 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + + L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEE 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + V + R+ G NV++ +L ++ D L
Sbjct: 151 AERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDA+ A+ ++NGK L +QI A K
Sbjct: 211 FGRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV-------YVGNLSSEVT 265
E+Q+ EL + GQ K ++ E PQ +V YV NL +
Sbjct: 270 V----ERQT-------ELKHKF--GQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGID 316
Query: 266 SVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L + F GTI +V R KGFGFV +S+ EA A+ N +I+ KP+
Sbjct: 317 DERLRKEFSPF--GTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLY 374
Query: 322 CSWGSK 327
+ +
Sbjct: 375 VALAQR 380
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 248 NNPQYT--TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYST 299
++P Y+ ++YVG+L +VT L+ F G I +RV RD+ G+ V +
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 258 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 317
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 318 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 377
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 378 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 436
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 437 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 480
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 481 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 530
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 40/230 (17%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS
Sbjct: 232 AERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 287
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 288 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVG----RFK 341
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF- 273
S E+++ E TN VY+ N ++ L F
Sbjct: 342 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFG 379
Query: 274 ---HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
AL V + D + KGFGFV + H +A A+ N + L GK I
Sbjct: 380 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 428
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 149/302 (49%), Gaps = 23/302 (7%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
+++++G++ + + + +F TG L K+I+ ++ YGFV++ +A +
Sbjct: 11 KTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQVLR 70
Query: 104 TLNGRHI--FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCS 160
T NG I Q ++NWA + T ++VFVGDL+P+VTD L F F +
Sbjct: 71 TFNGCPIPNTDQIFRLNWAAFGVGKVTTDSDYSVFVGDLAPDVTDYALQEHFRQFFASVR 130
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA-AKGATSG--- 216
A+V+ D TGRS+G+GFV F N+ + ++ +++G + +R IR + A AK + +
Sbjct: 131 SAKVITDPLTGRSKGYGFVRFGNEAERDRSLTEMSGHVINSRPIRVSIATAKKSQTATML 190
Query: 217 -DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+ Q+ D ++ G + S + +P TT+++G LSS V+ DL F
Sbjct: 191 PKQCQNFDFENFRLRVQG-APAPVASQPHPSDYDPNNTTLFIGGLSSGVSEDDLRVLFGR 249
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR--------ILCGKPIKCSWGSK 327
G I ++ KG GFV++ P A A+ AR IL G I+ SWG
Sbjct: 250 F--GDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQARCSPSLFGQILGGSTIRISWGRS 307
Query: 328 PT 329
T
Sbjct: 308 ST 309
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 38/200 (19%)
Query: 131 GHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSA 190
G +++GDL+ + ++ +++ F +++ ++ T S G+GFV F E A+
Sbjct: 9 GTKTLWMGDLAYWMDESFIYSIFVGTGNLVSVKIIRNKNTAVSEGYGFVEFATHEAAEQV 68
Query: 191 INDLNGKWLGNRQ--IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN 248
+ NG + N R NWAA G G+ ++ D
Sbjct: 69 LRTFNGCPIPNTDQIFRLNWAAFGV-----------------------GKVTTDSD---- 101
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVG-----TIEDVRVQRDKGFGFVRYSTHPEA 303
+V+VG+L+ +VT L HF I D R KG+GFVR+ E
Sbjct: 102 ----YSVFVGDLAPDVTDYALQEHFRQFFASVRSAKVITDPLTGRSKGYGFVRFGNEAER 157
Query: 304 ALAIQMGNARILCGKPIKCS 323
++ + ++ +PI+ S
Sbjct: 158 DRSLTEMSGHVINSRPIRVS 177
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 133/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ ++ I + Y V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQLEDAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + TL+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE+A+ AI +NG +L
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEEAERAIEKMNGMFL---------------------- 163
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
+D K V D Q + A E +T VY+ NL ++ L F AL
Sbjct: 164 NDHKVFVGRFKSRRDRQAELGARAKE----FTNVYIKNLGEDMDDERLQDLFGRFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A++ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQK 268
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 141/306 (46%), Gaps = 34/306 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + + L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEE 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + V + R+ G NV++ +L ++ D L
Sbjct: 151 AERAIEKMNGMFLNDHKVFVGRFKSRRDRQAELGARAKEFTNVYIKNLGEDMDDERLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDA+ A+ ++NGK L +QI A K
Sbjct: 211 FGRFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV-------YVGNLSSEVT 265
E+Q+ EL + GQ K ++ E PQ +V YV NL +
Sbjct: 270 V----ERQT-------ELKHKF--GQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGID 316
Query: 266 SVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L + F GTI +V R KGFGFV +S+ EA A+ N +I+ KP+
Sbjct: 317 DERLRKEFSPF--GTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLY 374
Query: 322 CSWGSK 327
+ +
Sbjct: 375 VALAQR 380
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 248 NNPQYT--TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYST 299
++P Y+ ++YVG+L +VT L+ F G I +RV RD+ G+ V +
Sbjct: 4 SDPSYSLASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 LEDAERALDTMNFDVIKGKPVRIMWSQR 89
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 41/272 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P VT A+L E+F+ GP+ ++ + + Y +V+Y + A+
Sbjct: 45 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 104
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I G+ ++ W SQR+ +G N+F+ +L ++ + L F+ F
Sbjct: 105 LNYSLIKGRACRIMW----SQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 160
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ GRS+G+GFV + E A++AI +NG L ++++ S E+QS
Sbjct: 161 CKVATDEH-GRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRERQS 219
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E Q+T +YV NL EVT D + F G +
Sbjct: 220 K----------------------LEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQF--GNV 255
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQ 308
+Q D +GFGFV + TH EA A++
Sbjct: 256 TSAVIQTDEQGQSRGFGFVNFETHEEAQKAVE 287
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 36/296 (12%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N+ Q+ N L + F++ G + CK+ + YGFV Y +A AI +
Sbjct: 133 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAV 192
Query: 106 NGRHIFGQPI--------KVNWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVF 156
NG + + + K + S+ E+ F N++V +L PEVT F F
Sbjct: 193 NGMLLNDKKVYVGHHISRKASSRERQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQF 252
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
+ A + D++ G+SRGFGFV+F E+AQ A+ L+ R++ + A K A
Sbjct: 253 GNVTSAVIQTDEQ-GQSRGFGFVNFETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAERE 311
Query: 217 DEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHAL 276
+E + S ++ VE + Q +Y+ NL ++ L + F
Sbjct: 312 EELRKSYEQAKVEKMSKY----------------QGVNLYIKNLEDDIDDERLRQEFEPF 355
Query: 277 CVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G+I +V RD KGFGFV +S+ EA A+ N +++ KP+ S +
Sbjct: 356 --GSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQR 409
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N +L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDA+ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL ++ L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + SSY +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGAKAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQK 268
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + DV +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQR 89
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 12/212 (5%)
Query: 29 QIEPILSGNLPPRFDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS 86
+I P + NL + A + + YVGN+ PQV+ LL E+F GP+ + KD+ +
Sbjct: 4 RIAPGVGANLLGQHSAERNQDATTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVT 62
Query: 87 -----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLS 141
YGFV++ A AI LN ++G+PI+VN A + D N+F+G+L
Sbjct: 63 NLHQGYGFVEFRSEEDADYAIKILNMLKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLD 120
Query: 142 PEVTDATLFACFSVFPT-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
PEV + L+ FS F ++ ++M D +TG SRGFGFVS+ + E + AI +N + L
Sbjct: 121 PEVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLC 180
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
NR I ++A K T G E+ + ++ ++ N
Sbjct: 181 NRPITVSYAYKKDTKG-ERHGTPAERLLAANN 211
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 89/198 (44%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ D N +
Sbjct: 88 MLKLYGKPIRVN-----------KASQDKKSL----------------DVGAN------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL EV L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FIGNLDPEVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 174 MNNQHLCNRPITVSYAYK 191
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 137/292 (46%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITR------YQGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 44/283 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V + D + KGFGFV + H +A A+ N + L GK I
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L +VT L+ F L + D+ +R G+ +V + +A
Sbjct: 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ GKP++ W +
Sbjct: 66 ERALDTMNFDVIKGKPVRIMWSQR 89
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L PEV + L+ FS F ++
Sbjct: 85 ILNMLKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPEVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ ++ N
Sbjct: 202 PAERLLAANN 211
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MLKLYGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL EV L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FIGNLDPEVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 174 MNNQHLCNRPITVSYAYK 191
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 130/299 (43%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDRR 96
P S ++++ N+ + N L + FSS G + CK+ YGFV Y +
Sbjct: 118 PTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKGYGFVQYDNEE 177
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTDATLFACF 153
SA AI LNG + + + V +RE T+G NV+V +LS TD L F
Sbjct: 178 SAQGAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTKFQNVYVKNLSESTTDDELKKVF 237
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
F + A VM D G+S+ FGF++F EDA A+ LNGK +++ A K +
Sbjct: 238 GEFGNITSAVVMRD-ADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKS 296
Query: 214 TSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF 273
E +S ++ E + Q +YV NL + L F
Sbjct: 297 EREQELKSKFEQTAKEAVDKY----------------QGLNLYVKNLDDTIDDEKLKELF 340
Query: 274 HALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GTI +V RD +G GFV +ST EA+ A+ N +++ KP+ + +
Sbjct: 341 SEF--GTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQR 397
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 47/280 (16%)
Query: 46 TCRSVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALA 101
T S+YVG++ VT++ L ++F+ G + C+ + +S YG+V+Y + A+ A
Sbjct: 36 TSTSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRA 95
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
+ LN + G+ I+V + S R+ T SG N+F+ +L + + L FS F
Sbjct: 96 MEMLNFTPVNGKSIRVMY----SHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGN 151
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
++ D G+S+G+GFV + N+E AQ AI+ LNG + ++Q+ +
Sbjct: 152 ILSCKIATD-SNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLR------- 203
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
KQ +S T G++ ++ VYV NLS T +L + F
Sbjct: 204 KQERES------TTGMT---------------KFQNVYVKNLSESTTDDELKKVFGEF-- 240
Query: 279 GTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNAR 313
G I V RD K FGF+ + T +AA A++ N +
Sbjct: 241 GNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGK 280
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
T++YVG+L VT L+ F+ VG + VRV RD G+G+V YS +A+ A
Sbjct: 38 TSLYVGDLEFNVTDSQLYDLFNQ--VGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRA 95
Query: 307 IQMGNARILCGKPIKCSW 324
++M N + GK I+ +
Sbjct: 96 MEMLNFTPVNGKSIRVMY 113
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 130/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 63 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 118
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 119 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 172
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV +L F G
Sbjct: 173 ELGAKAKEFTN----------------------VYIKNFGEEVDDDNLKELFSQF--GKT 208
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 209 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAI 252
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 134/292 (45%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 82 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 141
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 142 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKEL 201
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 202 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 260
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 261 V----ERQAELKRKFEQLK------QERISR------YQGVNLYIKNLDDTIDDEKLRKE 304
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 305 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 354
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 3 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 62
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 63 MNFDVIKGKPIRIMWSQR 80
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 286 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 345
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 346 GRIVGSKPLYVALAQRKEERK 366
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP+ C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 140/292 (47%), Gaps = 32/292 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++++ N+ Q+ N L + F++ G + CK+ + + YGFV Y +A AI +
Sbjct: 135 NIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKNV 194
Query: 106 NGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + + + V + +R ++ F N+++ ++ PEVTD A F +
Sbjct: 195 NGMLLNDKKVYVGHHISRKERQSKIDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVT 254
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ + D++ GRSRGFGFV++ E+AQ A+++LN K R++ + A K A +E +
Sbjct: 255 SSVIQRDEE-GRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELR 313
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
+ ++ +E + Q +YV NL +V L F GT
Sbjct: 314 KAHEQARLEKLSKY----------------QGLNLYVKNLDDDVDDEKLRAEFEPF--GT 355
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +V RD KGFGFV YS+ EA+ A+ N +++ KP+ S +
Sbjct: 356 ITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYVSHAQR 407
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 45/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P VT A+L E+F+ GP+ ++ + + Y +V+Y + A+
Sbjct: 47 SLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQ 106
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I +P ++ W SQR+ +G N+F+ +L ++ + L F+ F
Sbjct: 107 LNYSLIKNRPCRIMW----SQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLS 162
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ G S+G+GFV + E A++AI ++NG L +++
Sbjct: 163 CKVATDEH-GNSKGYGFVHYETAEAAENAIKNVNGMLLNDKK------------------ 203
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
V + + IS + +S D E Q+T +Y+ N+ EVT + F G +
Sbjct: 204 ------VYVGHHISRKERQSKID--EMKAQFTNLYIKNIDPEVTDEEFEALFREQ--GNV 253
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+QRD +GFGFV Y TH EA A+ N + G+ + S K
Sbjct: 254 TSSVIQRDEEGRSRGFGFVNYETHEEAQKAVDNLNDKDFHGRKLFVSRAQK 304
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 131/292 (44%), Gaps = 31/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S YGFV Y + +
Sbjct: 125 PAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILSCKVVTDENGSKGYGFVHYETQEA 184
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHFNVFVGDLSPEVTDATLFACF 153
A AI +NG I G+ + V +R E + NVFV +L + TDA L F
Sbjct: 185 AETAIAKVNGMVINGKQVFVGIFVPRKERVELGEGVTKFTNVFVKNLPEDTTDAALNDMF 244
Query: 154 SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 213
S F + +M +S+GFGFV + EDAQ+A+N LNG L + + A K A
Sbjct: 245 SKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQKKA 304
Query: 214 TSGDE-KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E KQ D+ + + N Q +YV NL + +
Sbjct: 305 EREAELKQRYDALRLERI-----------------NKYQGINLYVKNLDDAIDEDKIRTE 347
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKP 319
F GTI V++ RD +GFGF+ +S+ EA A+ N + + G P
Sbjct: 348 FAPF--GTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFP 397
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP+VT A L E+F++ GP+ ++ I + Y +V++ A A+ T
Sbjct: 46 SLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALDT 105
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I G+P ++ W SQR+ SG NVF+ +L + + L FS F
Sbjct: 106 LNYSLIRGKPCRIMW----SQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGNILS 161
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV + QE A++AI +NG + +Q+
Sbjct: 162 CKVVTDENG--SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVP---------- 209
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
K VEL G++ ++T V+V NL + T L+ F G I
Sbjct: 210 --RKERVELGEGVT---------------KFTNVFVKNLPEDTTDAALNDMFSKF--GKI 250
Query: 282 EDVRVQ------RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + + KGFGFV Y +A A+ N L GK + + K
Sbjct: 251 TSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNALNGTELAGKTLFVARAQK 302
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF-HALCVGT 280
E TN VY+ N ++ L F AL V
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGPALSVKV 219
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 MTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 265
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 33/299 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F P S +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FG--PALS-VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 267 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 310
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 311 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 367
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 136/302 (45%), Gaps = 35/302 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRR 96
P S +V++ N+ + N + + FS+ G + CK+ + +K + YGFV +
Sbjct: 82 PSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEE 141
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFA 151
SA +I +NG + + + V +RE G NV+V + E+TD +L
Sbjct: 142 SANTSIEKVNGMLLNAKKVFVGRFIPRKEREKELGEKAKLFTNVYVKNFGDELTDESLKE 201
Query: 152 CFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 211
F + T + RVM K +SRGFGFV+F N E A+ A+ +LNGK LG+ ++
Sbjct: 202 MFEKYGTITSHRVMI--KENKSRGFGFVAFENPESAEVAVQELNGKELGDGKV---LYVG 256
Query: 212 GATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV--YVGNLSSEVTSVDL 269
A +E+Q + +L E +Y V YV NL + L
Sbjct: 257 RAQKKNERQMELKRRFEQLKM--------------ERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 270 HRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ F GTI +V R KGFGFV +S EA A+ N RI+ KP+ +
Sbjct: 303 RKEFSPF--GTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALA 360
Query: 326 SK 327
+
Sbjct: 361 QR 362
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 130/278 (46%), Gaps = 44/278 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H +T A+L E FSS GP + C+ ++ + Y +V++ A A+ T
Sbjct: 3 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + ++ FS F
Sbjct: 63 MNFDLIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILS 118
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+K G S+G+GFV F +E A ++I +NG L +++
Sbjct: 119 CKVAQDEK-GNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFV--------------- 162
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
G +++ ++ E +T VYV N E+T L F GTI
Sbjct: 163 -----------GRFIPRKEREKELGEKAKLFTNVYVKNFGDELTDESLKEMFEKY--GTI 209
Query: 282 EDVRV----QRDKGFGFVRYSTHPEAALAIQMGNARIL 315
RV + +GFGFV + A +A+Q N + L
Sbjct: 210 TSHRVMIKENKSRGFGFVAFENPESAEVAVQELNGKEL 247
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +++T L F + L + DV +R G+ +V + +A A+
Sbjct: 3 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERALDT 62
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ G+PI+ W +
Sbjct: 63 MNFDLIKGRPIRIMWSQR 80
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF-HALCVGT 280
E TN VY+ N ++ L F AL V
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGPALSVKV 219
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 MTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 265
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 33/299 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F P S +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FG--PALS-VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 267 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 310
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 311 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 367
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 150/312 (48%), Gaps = 37/312 (11%)
Query: 47 CRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS---YGFVDYFDRRSAALAI 102
+++++G + P + +++V+ + G K+I+ +S Y FV+ F+ AA
Sbjct: 42 AKTLWMGELEPWMDENFVKQVWQTVCGEAVNVKVIRDRQSGNAGYCFVE-FNSAEAANKA 100
Query: 103 VTLNGRHIFG--QPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-F 156
+ LNG + + K+NWA +R++ F++FVGDL PEV + L + F F
Sbjct: 101 LQLNGSPVPNSQRVFKLNWASGGGLVDRRDERGPEFSIFVGDLGPEVNEFVLVSLFQARF 160
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN--------- 207
P+C A++M D TG+SRG+GFV F ++ D Q A+ ++ G + GNR +R +
Sbjct: 161 PSCKSAKIMTDAMTGQSRGYGFVRFTDEGDQQRALLEMQGVYCGNRPMRISTATPKTRSH 220
Query: 208 --WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPEN------------NPQYT 253
++A+G G ++ ++ + G+ G + A N +P T
Sbjct: 221 QQYSAQGQHGGPMPMAAPAQQ-QNMNWGMPYGFNQPAPPAANNFNAAMQPMNQFTDPNNT 279
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNAR 313
TV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 280 TVFVGGLSGYVTEDELRSFFQGF--GDITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 337
Query: 314 ILCGKPIKCSWG 325
+ ++ SWG
Sbjct: 338 PIGNSRVRLSWG 349
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKV----FVGHFKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V+V RD + FGFV + H EA A+ N + + G+
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 128/290 (44%), Gaps = 26/290 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F V T V + KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPL 363
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + DV +R G+ ++ + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N +L G+PI+ W +
Sbjct: 72 MNFEMLKGQPIRIMWSQR 89
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF-HALCVGT 280
E TN VY+ N ++ L F AL V
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGPALSVKV 219
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 MTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 265
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 33/299 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F P S +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FG--PALS-VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 267 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 310
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 311 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 367
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 136/292 (46%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + E+ +D Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKF-----------EQMKQDRI-TRYQGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 363
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 44/283 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V + D + KGFGFV + H +A A+ N + L GK I
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQI 261
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L +VT L+ F L + D+ +R G+ +V + +A
Sbjct: 6 PSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ GKP++ W +
Sbjct: 66 ERALDTMNFDVIKGKPVRIMWSQR 89
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+N I G+P+++ W+ + S R+ SG N+FV +L + + L+ S F +
Sbjct: 72 MNFDVIKGKPVRIMWSQHDPSLRK--SGVGNIFVKNLDKSINNKALYDTVSAFGNILSCK 129
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 130 VVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAEL 183
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALCVG 279
E N VY+ N ++ L F AL V
Sbjct: 184 GAKAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 222 VMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQK 268
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + D+ +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSW 324
+A A+ N ++ GKP++ W
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMW 86
>gi|19115155|ref|NP_594243.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe 972h-]
gi|3121946|sp|O13759.1|CSX1_SCHPO RecName: Full=RNA-binding post-transcriptional regulator csx1
gi|2656019|emb|CAB16569.1| RNA-binding protein Csx1 [Schizosaccharomyces pombe]
Length = 632
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 143/295 (48%), Gaps = 21/295 (7%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS------YGFVDYFDRRSAALAI 102
++++G++ P + +Q++++S K+++ SS Y FV + +A A+
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 103 VTLNGRHIFGQ--PIKVNWAYASSQREDT----SGHFNVFVGDLSPEVTDATLFACF-SV 155
+ N I G K+NWA + + F++FVGDL P D+ LF F S+
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 156 FPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATS 215
+P+C+ A+++ D TG SR +GFV F ++++ Q A+ + G R +R + A S
Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVA-----S 260
Query: 216 GDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA 275
+ S + S + + S + N+D +P TTV+VG L+S ++ DL F
Sbjct: 261 PKSRASIAADSALGIV-PTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQP 319
Query: 276 LCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPTP 330
G I ++++ KG GFV+YS A AI ++ I+ +WG P
Sbjct: 320 F--GRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHNTLP 372
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 8/184 (4%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSA 98
D + +VYVGN+ PQVT +L E+F GP+ + K +S YGFV++ + A
Sbjct: 24 DRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDA 83
Query: 99 ALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT 158
I LN +FG+PIKVN + R D G N+F+G+L P++ + L+ FS F
Sbjct: 84 EYGIKILNMVKLFGKPIKVNKSVGD--RRDEVGA-NLFIGNLDPDIDEKLLYDTFSAFGV 140
Query: 159 CSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ ++M D G S+GFGFV++ + E + +AI +NG++L N+QI +A K + G+
Sbjct: 141 VINTPKIMRDPDNGASKGFGFVAYDSFEASDAAIEAMNGQFLCNKQINVQYAYKKDSKGE 200
Query: 218 EKQS 221
S
Sbjct: 201 RHGS 204
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 87/206 (42%), Gaps = 41/206 (19%)
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
D + V+VG+L P+VT+ L+ F ++ V D+ T +G+GFV FRN+EDA
Sbjct: 24 DRNAEATVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDA 83
Query: 188 QSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPE 247
+ I LN L + I+ N + GD + +
Sbjct: 84 EYGIKILNMVKLFGKPIKVN-----KSVGDRRDEVGA----------------------- 115
Query: 248 NNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
+++GNL ++ L+ F A V I ++ RD KGFGFV Y +
Sbjct: 116 ------NLFIGNLDPDIDEKLLYDTFSAFGV-VINTPKIMRDPDNGASKGFGFVAYDSFE 168
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+ AI+ N + LC K I + K
Sbjct: 169 ASDAAIEAMNGQFLCNKQINVQYAYK 194
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 133/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ P VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ+AI+ +NG L +R++ S E++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGH----FKSRREREV 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQRLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N R + G+ + K
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQK 268
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQNAISTMNGMLLNDRKVFVGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ ++NG+ + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLTRY-QGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N E+ L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEMDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + E+ D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N +L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L + I A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL ++ L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + SSY +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPKDAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGAKAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK 268
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + DV +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQR 89
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATKPLYVALAQRKEERQ 375
>gi|14334958|gb|AAK59656.1| putative spliceosome associated protein [Arabidopsis thaliana]
Length = 363
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 116/212 (54%), Gaps = 12/212 (5%)
Query: 29 QIEPILSGNLPPRFDASTCR--SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-- 84
+I P + NL + A + +VYVG + Q++ LL E+F GP+ + KD+
Sbjct: 4 RIAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNV-YVPKDRVT 62
Query: 85 ---SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLS 141
+YGF++Y A AI LN + G+P++VN A + D N+F+G+L
Sbjct: 63 NLHQNYGFIEYRSEEDADYAIKVLNMIKLHGKPMRVNKASQDKKSLDVGA--NLFIGNLD 120
Query: 142 PEVTDATLFACFSVFPT-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLG 200
P+V + L+ FS F S+ ++M D TG SRGFGF+S+ + E + +AI + G++L
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180
Query: 201 NRQIRCNWAAKGATSGDEKQSSDSKSVVELTN 232
NRQI ++A K T G E+ + ++ ++ TN
Sbjct: 181 NRQITVSYAYKKDTKG-ERHGTPAERLLAATN 211
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
V+VG L ++++ L+ F + V D+ T + +GF+ +R++EDA AI L
Sbjct: 27 VYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNLHQNYGFIEYRSEEDADYAIKVL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + +R N K S D KS+ N
Sbjct: 87 NMIKLHGKPMRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + ++ RD +GFGF+ Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
+ L + I S+ K
Sbjct: 173 SMTGQYLSNRQITVSYAYK 191
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQP+++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPVRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDDIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ D S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AHQAIATMNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G SRGFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-IGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRATRY-QGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N E+ L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEMDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 261
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + E+ D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQP+++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPVRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARAMEFTN----------------------IYVKNLHVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDDIGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQK 268
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ D S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AHQAIATMNGMLLNDRKVFVGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G SRGFGFV+F E+AQ A+ D+NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-IGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRATRY-QGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 117 bits (294), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEI 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + RVM D +G+S+GFGFVSF EDAQ A++++NGK + +Q+ A K
Sbjct: 211 FCKYGPALSIRVMTDD-SGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 G----ERQTELKRKFEQMK------QDRMTRY------QGVNLYVKNLDDGLDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 48/292 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + ++ + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC-VGT 280
E TN VY+ N ++ L F C G
Sbjct: 182 EMGARAKEFTN----------------------VYIKNFGEDMDDEKLKEIF---CKYGP 216
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+RV D KGFGFV + H +A A+ N + + GK + K
Sbjct: 217 ALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQK 268
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 138/302 (45%), Gaps = 28/302 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++++G + P + ++ VF S+ + +DK+S Y FV+ F AA +
Sbjct: 50 TLWMGELEPWMDENFIKGVFLSSAHENVNVKVIRDKNSGNAGYCFVE-FQSPEAATKALN 108
Query: 105 LNGRHI--FGQPIKVNWAYASS---QREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPT 158
+NG + + K+NWA +R+D +++FVGDL PEV + L + F FP+
Sbjct: 109 MNGSQVPNSSRSFKLNWASGGGLVDRRDDRGPEYSIFVGDLGPEVNEYVLVSLFQARFPS 168
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
C A++M D +G+SRG+GFV F ++ D Q A+ ++ G + GNR +R + A
Sbjct: 169 CKSAKIMTDAMSGQSRGYGFVRFSDENDQQRALVEMQGVYCGNRPMRISTATPKNRGNHG 228
Query: 219 KQSSDSKSVVELTNGISD---------------GQEKSNEDAPENNPQYTTVYVGNLSSE 263
+ + G+ G + + +P TTV+VG LS
Sbjct: 229 FGGQGHQHGGPMMPGMPQQQMWNGGGMQGFPYGGFNPATQMNQFTDPNNTTVFVGGLSGY 288
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCS 323
VT +L F G I V++ KG GFV++ A +AI + ++ S
Sbjct: 289 VTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLS 346
Query: 324 WG 325
WG
Sbjct: 347 WG 348
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 135/303 (44%), Gaps = 48/303 (15%)
Query: 37 NLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDY 92
N PP F +S+YVG++ P V A+L E FS GP + C+ LI K Y +V++
Sbjct: 6 NPPPSF--PPLQSLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNF 63
Query: 93 FDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATL 149
A A+ T+N I GQP ++ W SQR+ + SG N+F+ +L + L
Sbjct: 64 QQPADAERALDTMNYEPIKGQPCRIMW----SQRDPSLRRSGVGNIFIKNLDKSIDHKAL 119
Query: 150 FACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
+ FS F +V D S+GFGFV F QE A AI +NGK L + ++ +
Sbjct: 120 YDTFSAFGNILSCKVATDGNR-HSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKV---YV 175
Query: 210 AKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDL 269
K D TNG N YT V++ N + T L
Sbjct: 176 GKFIPRKDRSH----------TNGF--------------NQHYTNVFIKNFGEDFTDTML 211
Query: 270 HRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSW 324
+ F G+I V +D KGFGFV + +H A+ A+Q + I+ G+ + C
Sbjct: 212 YDVFEKY--GSIVSAVVMKDGEGLSKGFGFVSFESHEAASAAVQAVHNSIVNGRQVYCGR 269
Query: 325 GSK 327
K
Sbjct: 270 AQK 272
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 137/302 (45%), Gaps = 35/302 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRR 96
P S ++++ N+ + + L + FS+ G + CK+ + +GFV + ++
Sbjct: 95 PSLRRSGVGNIFIKNLDKSIDHKALYDTFSAFGNILSCKVATDGNRHSKGFGFVHFDEQE 154
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG---HF-NVFVGDLSPEVTDATLFAC 152
+A LAI +NG+ + + V R T+G H+ NVF+ + + TD L+
Sbjct: 155 AADLAIEKVNGKLLNDMKVYVGKFIPRKDRSHTNGFNQHYTNVFIKNFGEDFTDTMLYDV 214
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + + A VM D + G S+GFGFVSF + E A +A+ ++ + RQ+ C A
Sbjct: 215 FEKYGSIVSAVVMKDGE-GLSKGFGFVSFESHEAASAAVQAVHNSIVNGRQVYCGRA--- 270
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV--YVGNLSSEVTSVDLH 270
+K++ S+ ++ + E E +Y V Y+ NL + L
Sbjct: 271 -----QKKNERSRELM----------RRKEEQRQERLSRYQGVNLYIKNLEDTLGEEKLK 315
Query: 271 RHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
F G+I ++ D KGFGFV +S+ EA A+ N RI+ KP+ +
Sbjct: 316 SEFSKF--GSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALA 373
Query: 326 SK 327
+
Sbjct: 374 QR 375
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKDLFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVI 261
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK +G + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 139/297 (46%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILSCKVVCDENGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V + ++ D L
Sbjct: 151 ANQAINTMNGMLLNDRKVFVGHFKSRQEREAELGARALEFTNIYVKNFEGDMDDECLQEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D+ G+SRGFGFV+F E+AQ A++++NGK LG R + A K
Sbjct: 211 FSQFGKTLSVKVMVDE-NGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
+ E+QS + ++ QE+ N Q +YV NL + L +
Sbjct: 270 S----ERQSELKRRFEQMK------QERVNRY------QGVNLYVKNLDDIIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 131/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS+ GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGRPIRIMW----SQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E A AIN +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGH----FKSRQEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV N ++ L F G
Sbjct: 182 ELGARALEFTN----------------------IYVKNFEGDMDDECLQELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D +GFGFV + H EA A+ N + L G+ + K
Sbjct: 218 LSVKVMVDENGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQK 268
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 102/181 (56%), Gaps = 13/181 (7%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRS 97
DA+T YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++
Sbjct: 24 DATT----YVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEED 78
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
A AI LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F
Sbjct: 79 ADYAIKILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFG 136
Query: 158 T-CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSG 216
++ ++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G
Sbjct: 137 VIVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKG 196
Query: 217 D 217
+
Sbjct: 197 E 197
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI L
Sbjct: 27 TYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS+ N
Sbjct: 87 NMIKLYGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYESFESSDQAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 173 AMNNQHLCNRPITVSYAYK 191
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 153/332 (46%), Gaps = 27/332 (8%)
Query: 5 RLKQQTMMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALL 64
RLK +++ +++L + ++ I I+ P S +V++ N+ + N L
Sbjct: 53 RLKCVSLVAERALDTMNFDVIKGKPIR-IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAL 111
Query: 65 QEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYA 122
+ FS+ G + CK++ + S Y FV + + +A AI +NG + + + V +
Sbjct: 112 YDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKS 171
Query: 123 SSQREDTSG-----HFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFG 177
+RE G NV++ + EV D +L FS F +VM D TG+S+GFG
Sbjct: 172 RKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRD-PTGKSKGFG 230
Query: 178 FVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDG 237
FVS+ EDA A+ ++NGK + + I A K E+Q+ + +L
Sbjct: 231 FVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKV----ERQAELKRKFEQLK------ 280
Query: 238 QEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ--RDKGFGFV 295
QE+ + Q +Y+ NL + L + F T +V ++ R KGFGFV
Sbjct: 281 QERISRY------QGVNLYIKNLDDTIDDEKLRKEFSPFGSITRAEVMLEDGRSKGFGFV 334
Query: 296 RYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+S+ EA A+ N RI+ KP+ + +
Sbjct: 335 CFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 366
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 124/284 (43%), Gaps = 50/284 (17%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAAL----AIVT 104
S+YVGN+H VT A+L E S L +IK + V Y + +L A+ T
Sbjct: 12 SLYVGNLHGDVTEAMLYEKLSPRD-LTHLWVIKNITNC---VLYPRLKCVSLVAERALDT 67
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 68 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 123
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 124 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 177
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 178 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 213
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 214 LSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 257
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P V+ ALL ++FS G + ++ + K Y +V++ D + AI
Sbjct: 36 SLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIEQ 95
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I G+ ++ W SQR+ G N+F+ +L P++ + LF FSVF
Sbjct: 96 LNYTPIKGRLCRIMW----SQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNILS 151
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+++ D+ TG+S+GFGFV F ++ A+ AI+ LNG L ++I
Sbjct: 152 SKIATDE-TGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYV--------------- 195
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA---LCV 278
LT D Q E +T VYV N++ E T + + F +
Sbjct: 196 -----APHLTRKERDSQ------LEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVLS 244
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
++E + KGFGFV + H +AA A++ N
Sbjct: 245 SSLEKTEDGKLKGFGFVDFEKHEDAAKAVEELNG 278
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 125/285 (43%), Gaps = 32/285 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N+HP + N L E FS G + K+ + +GFV + SA AI L
Sbjct: 124 NIFIKNLHPDIDNKALFETFSVFGNILSSKIATDETGKSKGFGFVHFEHESSAKEAIDAL 183
Query: 106 NGRHIFGQPIKV----NWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + GQ I V SQ E+T HF NV+V +++ E TD F+ +
Sbjct: 184 NGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAKYGNVL 243
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+ + + G+ +GFGFV F EDA A+ +LNG ++ + + A K E +
Sbjct: 244 SSS-LEKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYERMQELK 302
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S +E Q ++V NL + L F GT
Sbjct: 303 KQYEASRLEKMAKY----------------QGVNLFVKNLDDSIDDEKLKEEFAPY--GT 344
Query: 281 IEDVRVQR-----DKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
I VRV R KGFGFV +ST EA AI N +I+ GKP+
Sbjct: 345 ITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 389
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + CK++ + S YGFV + R +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGIPLNDCKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM DQ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPTLSVKVMTDQ-SGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QVVNLYVKNLDDAIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ +P+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALAQR 370
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNVLS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F +E A+ AI +NG L + C S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFGTREAAERAIEKMNGIPLND----CKVFVGRFKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E N VY+ N ++ L F G
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKF--GPT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V D KGFGFV + H +A A+ N + L GK I K
Sbjct: 218 LSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y T +YVG+L +VT L+ F L + DV +R + +V + +A
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQHPKDA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ GKP++ W +
Sbjct: 66 EHALDTMNFDVIKGKPLRIMWSQR 89
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ + + L++ FS G + K++ + S +GFV + A A+ +N
Sbjct: 295 NLYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVATEPLYVALAQRKEERQ 375
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F G
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 261
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 40/338 (11%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGF 89
++ N P S ++++ N+ + N L E FSS G + CK+ + +GF
Sbjct: 119 VMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSFGTILSCKVAMDEAGQSKGFGF 178
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTD 146
V Y +A AI +LNG I +P+ V +R+ D + NVFV +LS T
Sbjct: 179 VQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTK 238
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L F + + + A VM G+SR FGF++F N + A A+ +LNGK + +++
Sbjct: 239 EDLLKVFGEYGSITSAVVMIGMD-GKSRCFGFINFENPDAASRAVQELNGKKINDKE--- 294
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
W A E++ +EL E+S +DA + Q +Y+ NL +
Sbjct: 295 -WYVGRAQKKSERE-------MELKRRF----EQSLKDAADKY-QGLNLYLKNLDDSIGD 341
Query: 267 VDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L F G I +V RD KG GFV +ST EA+ A+ N +++ GKP+
Sbjct: 342 DQLRELFSNF--GKITSYKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLY 399
Query: 322 CSWGSKPTPPGT----------SSTPLPPPPAPHLPGF 349
++ + + P+ P AP LP +
Sbjct: 400 VAFAQRKEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMY 437
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 41/279 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ V+++ L E+FS G + C+ + +S Y +V++ + AA A+
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + +PI+V ++ SS+R SG N+F+ +L + + TL FS F T
Sbjct: 107 LNFAVLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKTIDNKTLHETFSSFGTILSC 163
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D+ G+S+GFGFV + +E AQ+AI LNG + ++ + +
Sbjct: 164 KVAMDE-AGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLR----------- 211
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
K D + ++ V+V NLS T DL + F T
Sbjct: 212 -----------------KQERDHSFDKTKFNNVFVKNLSESTTKEDLLKVFGEYGSITSA 254
Query: 283 DVRVQRD---KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V + D + FGF+ + A+ A+Q N + + K
Sbjct: 255 VVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDK 293
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L V+ L+ F + V DV +R G+ +V +S +AA A++
Sbjct: 46 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALE 105
Query: 309 MGNARILCGKPIKCSWGSK 327
+ N +L KPI+ + ++
Sbjct: 106 VLNFAVLNNKPIRVMYSNR 124
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 143/307 (46%), Gaps = 31/307 (10%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGF 89
I+ N P S ++++ N+ + N L + FS+ G + CK+ I + YGF
Sbjct: 115 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFGTILSCKVATEISGESKGYGF 174
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG---HFNVFVGDLSPEVTD 146
V Y SA AI LNG + + + V +RE+ G NV+V +LS T+
Sbjct: 175 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTE 234
Query: 147 ATLFACFSVF-PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L F F P S V D G+SR FGFV+F N +DA A+ DLNGK L ++++
Sbjct: 235 DNLKEMFGKFGPITSVIVVRADD--GKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELY 292
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K KS E+ + + EKSN++ + N Q T +Y+ NL V
Sbjct: 293 VGRAQK-------------KSEREMQ--LKEKFEKSNKETADKN-QGTNLYLKNLDGSVD 336
Query: 266 SVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+ + A GTI +V RD KG GFV + + +A+ A+ N +++ KP+
Sbjct: 337 DDEKLKELFA-EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPL 395
Query: 321 KCSWGSK 327
+ +
Sbjct: 396 YVALAQR 402
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 43/291 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVT 104
S+YVG++ V +A L +VFS G + ++ + + Y +V++ AA A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN + G+PI++ ++ S R+ SG N+F+ +L + + LF FS F T +
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRK--SGAANIFIKNLDKSIDNKALFDTFSAFGTILSCK 160
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V + +G S+G+GFV + E AQ+AIN+LNG L ++++ +
Sbjct: 161 VAT-EISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVR------------ 207
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
QE+ N +P++ VYV NLS T +L F G I
Sbjct: 208 -------------KQERENVFG---SPKFNNVYVKNLSESTTEDNLKEMFGKF--GPITS 249
Query: 284 VRVQR-DKG----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
V V R D G FGFV + +AA A++ N + L K + K +
Sbjct: 250 VIVVRADDGKSRCFGFVNFENPDDAARAVEDLNGKKLDDKELYVGRAQKKS 300
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAALAIVTL 105
+++V N+ V N L E FS G + CK+ YGFV + SA AI L
Sbjct: 135 NLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKL 194
Query: 106 NGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
NG+ + + I V +RE D NV+V +LS TD L F + + S A
Sbjct: 195 NGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSA 254
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
VM D G+SR FGFV+F N EDA A+ LNGK +++ W A E++
Sbjct: 255 VVMRD-GDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKE----WYVGKAQKKSERELE 309
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
S+ G SDG K + +YV NL VT L F GTI
Sbjct: 310 LSR---RYEQGSSDGGNKFDG---------LNLYVKNLDDTVTDEKLRELFAEF--GTIT 355
Query: 283 DVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD KG GFV +S EA+ + N +++ GKP+ + +
Sbjct: 356 SCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L + F+ + ++ + ++ YG+V+Y + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LN ++ G+ I++ ++ S SG N+FV +L V + TL FS T +V
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSAR-RSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
D G+SRG+GFV F ++ A++AI LNGK L ++QI + +E++S+
Sbjct: 166 ATDH-MGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLR----KEERESAAD 220
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K ++T VYV NLS T +L F G+I
Sbjct: 221 KM------------------------KFTNVYVKNLSEATTDDELKTTFGQY--GSISSA 254
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNAR 313
V RD + FGFV + +AA A++ N +
Sbjct: 255 VVMRDGDGKSRCFGFVNFENPEDAARAVEALNGK 288
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALAI 307
++YVG+L VT L+ +F +C + VRV RD G+G+V YS +A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVC--QVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 308 QMGNARILCGKPIKCSW 324
Q N L GK I+ ++
Sbjct: 105 QKLNYSYLNGKMIRITY 121
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY---GFVDYFDRRSAALAIVTL 105
++YV N+ VT+ L+E+F+ G + CK+++ + GFV + A+ + +
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 106 NGRHIFGQPIKVNWAYASSQR 126
NG+ + G+P+ V A +R
Sbjct: 389 NGKMVGGKPLYVALAQRKEER 409
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKK---DKSSYGFVDYFDRRSAALAIVTL 105
+++V N+ V N L E FS G + CK+ YGFV + SA AI L
Sbjct: 135 NLFVKNLDKSVDNKTLHEAFSGCGTIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKL 194
Query: 106 NGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
NG+ + + I V +RE D NV+V +LS TD L F + + S A
Sbjct: 195 NGKVLNDKQIFVGPFLRKEERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSA 254
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
VM D G+SR FGFV+F N EDA A+ LNGK +++ W A E++
Sbjct: 255 VVMRD-GDGKSRCFGFVNFENPEDAARAVEALNGKKFDDKE----WYVGKAQKKSERELE 309
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
S+ G SDG K + +YV NL VT L F GTI
Sbjct: 310 LSR---RYEQGSSDGGNKFDG---------LNLYVKNLDDTVTDEKLRELFAEF--GTIT 355
Query: 283 DVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V RD KG GFV +S EA+ + N +++ GKP+ + +
Sbjct: 356 SCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 405
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 41/274 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
S+YVG++ VT++ L + F+ + ++ + ++ YG+V+Y + A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
LN ++ G+ I++ ++ S SG N+FV +L V + TL FS T +V
Sbjct: 107 LNYSYLNGKMIRITYSSRDSSAR-RSGVGNLFVKNLDKSVDNKTLHEAFSGCGTIVSCKV 165
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
D G+SRG+GFV F ++ A++AI LNGK L ++QI + +E++S+
Sbjct: 166 ATDH-MGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLR----KEERESAAD 220
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
K ++T VYV NLS T +L F G+I
Sbjct: 221 KM------------------------KFTNVYVKNLSEATTDDELKTTFGQY--GSISSA 254
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNAR 313
V RD + FGFV + +AA A++ N +
Sbjct: 255 VVMRDGDGKSRCFGFVNFENPEDAARAVEALNGK 288
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALAI 307
++YVG+L VT L+ +F +C + VRV RD G+G+V YS +A A+
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVC--QVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAM 104
Query: 308 QMGNARILCGKPIKCSW 324
Q N L GK I+ ++
Sbjct: 105 QKLNYSYLNGKMIRITY 121
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY---GFVDYFDRRSAALAIVTL 105
++YV N+ VT+ L+E+F+ G + CK+++ + GFV + A+ + +
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 106 NGRHIFGQPIKVNWAYASSQR 126
NG+ + G+P+ V A +R
Sbjct: 389 NGKMVGGKPLYVALAQRKEER 409
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 133/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ AIN +NG L +R++ S E+ +
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGH----FKSRRERAA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL ++V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPADVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD + FGFV + H EA A+ N + + G+ + S K
Sbjct: 218 LSVKVMRDSSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQK 268
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETYEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +R G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +GRSR FGFV+F E+AQ A+ +NGK + R + + A K
Sbjct: 211 FSQFGKMLSVKVMRD-SSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLSRY-QGVNLYVKNLDDSIDDGKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 144/324 (44%), Gaps = 39/324 (12%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDY 92
+ G L P D + RSV+ G + QV ++++ FS + + Y FVD+
Sbjct: 73 LWMGELEPWIDENFVRSVWFGMGY-QVNVKMIRDKFSGS------------NAGYCFVDF 119
Query: 93 FDRRSAALAIVTLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTD 146
+ SA A+ LNG+ I + K+NWA A R+D +++FVGDL PEV +
Sbjct: 120 ENPESATRAL-QLNGQVIPNSNRQFKLNWASGGGLADRSRDDRGPEYSIFVGDLGPEVNE 178
Query: 147 ATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L + F + +C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R
Sbjct: 179 YVLMSLFQGKYTSCKSAKIMSDPISGMSRGYGFVRFADEGDQQKALHEMQGVYCGNRPMR 238
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTN-------------GISDGQEKSNEDAPENNPQY 252
+ A SG G + N+ NN
Sbjct: 239 ISTATPKNKSGGGGPGMPGMQGGMGPGAPGGVYAMGAPPMGYYGAPQPMNQFTDPNN--- 295
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNA 312
TTV+VG LS VT +L F G I V++ KG GFV++ A +AI
Sbjct: 296 TTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQG 353
Query: 313 RILCGKPIKCSWGSKPTPPGTSST 336
+ ++ SWG G + T
Sbjct: 354 YPIGNSRVRLSWGRSQNNSGPAGT 377
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ + L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDV 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F+ + RVM D +G+SRGFGFVSF EDAQ A++++NGK + + I A K
Sbjct: 211 FNKYGNAMSIRVMTDD-SGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQAELKRKFEQMK------QDRMTRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMLEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 130/291 (44%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS G + + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGRPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N ++ L F+ G
Sbjct: 182 ELGARAREFTN----------------------VYIKNFGDDMDEEKLRDVFNKY--GNA 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+RV D +GFGFV + H +A A+ N + + GKPI K
Sbjct: 218 MSIRVMTDDSGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQK 268
>gi|226495169|ref|NP_001150649.1| nucleic acid binding protein [Zea mays]
gi|195640856|gb|ACG39896.1| nucleic acid binding protein [Zea mays]
Length = 420
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV++F SA A+
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G H+ +P K+NWA S +R + + ++FVGDL+ +VTD L FS +
Sbjct: 159 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYR 217
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A++++NG + R IR G
Sbjct: 218 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRI---------GP 268
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + SN TVYVG L V+ +L + F
Sbjct: 269 ATPRRSSGDSGSSTPGHSDG-DSSNR----------TVYVGGLDPNVSEDELRKAFAKY- 316
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV++ + +A A+Q N ++ + ++ SW P+
Sbjct: 317 --DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPS 366
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+FSS ++G K+I + YGFV + D
Sbjct: 185 RSEVASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 244
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 245 NDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSSNRTVYVGGLDPNV 304
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + S K + GFV F ++ DA+ A+ LNG +G + +
Sbjct: 305 SEDELRKAFAKYDLAS-------VKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAV 357
Query: 205 RCNW 208
R +W
Sbjct: 358 RLSW 361
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S+ R+VYVG + P V+ L++ F+ L K+ + GFV + R A A+
Sbjct: 290 SSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC--GFVQFVSRTDAEEALQG 346
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 347 LNGSLIGKQAVRLSWVRSPSHKQ 369
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS G + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+ +
Sbjct: 128 CKVACDKHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRRERAA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL ++V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPADVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD + FGFV + H EA A+ N + + G+ + S K
Sbjct: 218 LSVKVMRDNSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQK 268
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI--KKDKSSYGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ K +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDKHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +R G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +GRSR FGFV+F E+AQ A+ +NGK + R + + A K
Sbjct: 211 FSQFGKMLSVKVMRD-NSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRKFEQMKQDRLSRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 129/284 (45%), Gaps = 46/284 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFV--------------- 170
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
G +++ + ++T VY+ N EV L F G
Sbjct: 171 -----------GRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQF--GKT 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 218 LSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVI 261
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 270 V----ERQAELKRKFEQLK------QERI------SRYQGVNLYIKNLDDTIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 370
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 354
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 355 GRIVGSKPLYVALAQRKEERK 375
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 29/305 (9%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGF 89
++ N P S +V+V N++ V N LQE+F G + CK+ K + + YGF
Sbjct: 111 VMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGF 170
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR--EDTSGHFNVFVGDLSPEVTDA 147
V + + SA +I LN H G+ + V S+R + + N+++ +L ++T+
Sbjct: 171 VQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEE 230
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
+ FS + ++M + G S+GFGFVSF+N E A+ A +NG LG++ +
Sbjct: 231 LIKLKFSQYGLVISVKIM-KRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTL--- 286
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
+ A+ + KQ +EK NE ++N + VY+ N++ EV
Sbjct: 287 YVARAQKKAERKQYLQRLH-----------EEKRNEIITKSNG--SNVYIKNINDEVGDD 333
Query: 268 DLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L F+ G I ++ RD KGFGFV Y+T EA A+ + GKP+
Sbjct: 334 ALRERFNEF--GNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYV 391
Query: 323 SWGSK 327
+ +
Sbjct: 392 AIAQR 396
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 46/294 (15%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
+T ++YVG++H V L EVF G L ++ + + +S YG+V+Y + AA+
Sbjct: 35 ATVPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAI 94
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ LN I +PI+V W S++ D SG NVFV +L+ V + +L F F
Sbjct: 95 ALEKLNHSLILDKPIRVMW---SNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGD 151
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+V ++ G SRG+GFV F QE A ++I +LN RQ+ K +
Sbjct: 152 ILSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKS----- 205
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
E + N+ +YT +Y+ NL ++T + F
Sbjct: 206 ------------------------ERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQY-- 239
Query: 279 GTIEDVRV-QRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G + V++ +RD KGFGFV + A A + N +L K + + K
Sbjct: 240 GLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQK 293
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG------FGFVRYSTHPE 302
N +YVG+L V L F +GT+ VRV RD +G+V Y + +
Sbjct: 34 NATVPALYVGDLHESVREEHLLEVFGK--IGTLTSVRVCRDNATSNSLRYGYVNYLSQAD 91
Query: 303 AALAIQMGNARILCGKPIKCSWGSK 327
AA+A++ N ++ KPI+ W ++
Sbjct: 92 AAIALEKLNHSLILDKPIRVMWSNR 116
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDRRSAALA 101
S +VY+ NI+ +V + L+E F+ G + K+++ +K +GFV Y A A
Sbjct: 316 SNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCA 375
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHFNVFVGDLSPEV 144
+ + G +G+P+ V A +R E VG SP +
Sbjct: 376 VSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVI 422
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + C ++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +M D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVELMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ ++ ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 128/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
V+ D+ S+G+GFV F E A+ AI +NG L R++ S E+++
Sbjct: 128 CNVVCDENG--SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VELMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 250 PQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHP 301
P Y T +YVG+L +VT L+ F G I +R+ RD + +V +
Sbjct: 6 PSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRICRDLITSGSSNYAYVNFQHTK 63
Query: 302 EAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQR 89
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ ++ N
Sbjct: 202 PAERLLAANN 211
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MIKLYGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 174 MNNQHLCNRPITVSYAYK 191
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 143/305 (46%), Gaps = 29/305 (9%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGF 89
++ N P S +V+V N++ V N LQE+F G + CK+ K + + YGF
Sbjct: 111 VMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGDILSCKVAKNEDGTSRGYGF 170
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR--EDTSGHFNVFVGDLSPEVTDA 147
V + + SA +I LN H G+ + V S+R + + N+++ +L ++T+
Sbjct: 171 VQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTNNDDKYTNLYMKNLDDDITEE 230
Query: 148 TLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCN 207
+ FS + ++M + G S+GFGFVSF+N E A+ A +NG LG++ +
Sbjct: 231 LIKLKFSQYGLVISVKIM-KRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTL--- 286
Query: 208 WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSV 267
+ A+ + KQ +EK NE ++N + VY+ N++ EV
Sbjct: 287 YVARAQKKAERKQYLQCLH-----------EEKRNEIITKSNG--SNVYIKNINDEVGDD 333
Query: 268 DLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKC 322
L F+ G I ++ RD KGFGFV Y+T EA A+ + GKP+
Sbjct: 334 ALRERFNEF--GNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYV 391
Query: 323 SWGSK 327
+ +
Sbjct: 392 AIAQR 396
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 132/294 (44%), Gaps = 46/294 (15%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAAL 100
+T ++YVG++H V L EVF G L ++ + + +S YG+V+Y + AA+
Sbjct: 35 ATVPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAI 94
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQREDT--SGHFNVFVGDLSPEVTDATLFACFSVFPT 158
A+ LN I +PI+V W S++ D SG NVFV +L+ V + +L F F
Sbjct: 95 ALEKLNHSLILDKPIRVMW---SNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFGD 151
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 218
+V ++ G SRG+GFV F QE A ++I +LN RQ+ K +
Sbjct: 152 ILSCKVAKNE-DGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKS----- 205
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
E + N+ +YT +Y+ NL ++T + F
Sbjct: 206 ------------------------ERSTNNDDKYTNLYMKNLDDDITEELIKLKFSQY-- 239
Query: 279 GTIEDVRV-QRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G + V++ +RD KGFGFV + A A + N +L K + + K
Sbjct: 240 GLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESMNGMLLGSKTLYVARAQK 293
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 249 NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKG------FGFVRYSTHPE 302
N +YVG+L V L F +GT+ VRV RD +G+V Y + +
Sbjct: 34 NATVPALYVGDLHESVREEHLLEVFGK--IGTLTSVRVCRDNATSNSLRYGYVNYLSQAD 91
Query: 303 AALAIQMGNARILCGKPIKCSWGSK 327
AA+A++ N ++ KPI+ W ++
Sbjct: 92 AAIALEKLNHSLILDKPIRVMWSNR 116
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDRRSAALA 101
S +VY+ NI+ +V + L+E F+ G + K+++ +K +GFV Y A A
Sbjct: 316 SNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCA 375
Query: 102 IVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHFNVFVGDLSPEV 144
+ + G +G+P+ V A +R E VG SP +
Sbjct: 376 VSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMVGATSPVI 422
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ S YGFV + +
Sbjct: 92 PSLRKSGVGNIFIKNLDKNIDNKALYDTFSAFGNILSCKIAMDQNGSLGYGFVHFETEEA 151
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH-----FNVFVGDLSPEVTDATLFAC 152
A +I +NG + G+ + V + +R + G NV+V +L+ + D L
Sbjct: 152 ARNSIEKVNGMLLNGKKVFVGRFMSRKERLEMLGDKAKKFTNVYVKNLNETMDDKKLREM 211
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F VF A++M + + G+ RGFGFVSF + E A A+ +LN K + ++I A K
Sbjct: 212 FEVFGKIISAKMM-NTEEGQKRGFGFVSFDDHEAAAKAVEELNNKEVEGKEIYVGRAQKK 270
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E + + +E N Q +YV NL ++ L +
Sbjct: 271 AERQAELKEKFERMKMERINRY----------------QGVNLYVKNLDEQIDDERLRKE 314
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI RV R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 315 FSQF--GTITSARVMTEGGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALAQR 371
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS+ GP + C+ LI + Y +V++ A A+ T
Sbjct: 13 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 72
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 73 MNFDAIKGRPIRIMW----SQRDPSLRKSGVGNIFIKNLDKNIDNKALYDTFSAFGNILS 128
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
++ DQ S G+GFV F +E A+++I +NG L +++ +
Sbjct: 129 CKIAMDQNG--SLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVG------------RF 174
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHA---LCV 278
K +E+ + D +K +T VYV NL+ + L F +
Sbjct: 175 MSRKERLEM---LGDKAKK-----------FTNVYVKNLNETMDDKKLREMFEVFGKIIS 220
Query: 279 GTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ + + +GFGFV + H AA A++ N + + GK I K
Sbjct: 221 AKMMNTEEGQKRGFGFVSFDDHEAAAKAVEELNNKEVEGKEIYVGRAQK 269
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ Q+ + L++ FS G + +++ + + +GFV + A A+ +N
Sbjct: 296 NLYVKNLDEQIDDERLRKEFSQFGTITSARVMTEGGRTKGFGFVCFSSPEEATKAVTEMN 355
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGHF 133
GR + +P+ V A ++ED H
Sbjct: 356 GRIVVAKPLYVALA---QRKEDRKAHL 379
>gi|194703366|gb|ACF85767.1| unknown [Zea mays]
Length = 420
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV++F SA A+
Sbjct: 99 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 158
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G H+ +P K+NWA S +R + + ++FVGDL+ +VTD L FS +
Sbjct: 159 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYR 217
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A++++NG + R IR G
Sbjct: 218 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRI---------GP 268
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + SN TVYVG L V+ +L + F
Sbjct: 269 ATPRRSSGDSGSSTPGHSDG-DSSNR----------TVYVGGLDPNVSEDELRKAFAKY- 316
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV++ + +A A+Q N ++ + ++ SW P+
Sbjct: 317 --DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPS 366
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+FSS ++G K+I + YGFV + D
Sbjct: 185 RSEVASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 244
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 245 NDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSSNRTVYVGGLDPNV 304
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + S K + GFV F ++ DA+ A+ LNG +G + +
Sbjct: 305 SEDELRKAFAKYDLAS-------VKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAV 357
Query: 205 RCNW 208
R +W
Sbjct: 358 RLSW 361
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S+ R+VYVG + P V+ L++ F+ L K+ + GFV + R A A+
Sbjct: 290 SSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC--GFVQFVSRTDAEEALQG 346
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 347 LNGSLIGKQAVRLSWVRSPSHKQ 369
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 29/299 (9%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N + + FS+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGDILSCKVVCDENGSKGYGFVHFATEEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A +I +NG + G+ + V + +R D G NVFV + E+ D L
Sbjct: 151 ANKSIEKVNGMLLNGKKVYVGKFMSRKERYDAMGGQQKKFTNVFVKNFGDELDDEGLREM 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + +VM D +GR++GFGFV F + DA++A +DLN K + R + A K
Sbjct: 211 FERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQKK 270
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q ++ ++ EL E++N Q +YV NL + L +
Sbjct: 271 I----ERQ-AELRNRFELMKA-----ERANRY------QGVNLYVKNLDDSLDDERLRKE 314
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F + GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 315 F--MPFGTITSAKVMSEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 371
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 43/281 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FSS GP+ + +I + Y +V++ A A+ +
Sbjct: 12 SLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDS 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + ++ FS F
Sbjct: 72 MNFDVIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGDILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F +E A +I +NG L +++ + K + K+
Sbjct: 128 CKVVCDENG--SKGYGFVHFATEEAANKSIEKVNGMLLNGKKV---YVGKFMS---RKER 179
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
D+ GQ+K ++T V+V N E+ L F +
Sbjct: 180 YDAMG----------GQQK----------KFTNVFVKNFGDELDDEGLREMFERYGKIVS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGK 318
++D R+KGFGFV + +A A N + + G+
Sbjct: 220 HKVMQDDHSGRNKGFGFVCFEDPIDAENACDDLNMKDINGR 260
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 250 PQY--TTVYVGNLSSEVTSVDLHRHFHA----LCVGTIEDVRVQRDKGFGFVRYSTHPEA 303
P Y ++YVG+L ++VT L F + L + D+ +R G+ +V + +A
Sbjct: 6 PSYPMASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQPADA 65
Query: 304 ALAIQMGNARILCGKPIKCSWGSK 327
A+ N ++ G+PI+ W +
Sbjct: 66 ERALDSMNFDVIKGRPIRIMWSQR 89
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 30/292 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 20 PSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 79
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D L
Sbjct: 80 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKEL 139
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 140 FSQFGKTLSVKVMRDS-SGKSKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKK 198
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L R
Sbjct: 199 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRRE 242
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 243 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPL 292
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L+ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 224 NLYIKNLDDTIDDEKLRREFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 283
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 284 GRIVGSKPLYVALAQRKEERK 304
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 106/190 (55%), Gaps = 10/190 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G E+ +
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKG-ERHGT 201
Query: 223 DSKSVVELTN 232
++ ++ N
Sbjct: 202 PAERLLAANN 211
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 40/198 (20%)
Query: 136 FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 195
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI LN
Sbjct: 28 YVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKILN 87
Query: 196 GKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTV 255
L + IR N K S D KS+ N +
Sbjct: 88 MIKLYGKPIRVN-----------KASQDKKSLDVGAN----------------------L 114
Query: 256 YVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQM 309
++GNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 115 FIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIEA 173
Query: 310 GNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 174 MNNQHLCNRPITVSYAYK 191
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 152/337 (45%), Gaps = 39/337 (11%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGF 89
I+ N P S ++++ N+ + N L + FS+ G + CK+ + + YGF
Sbjct: 115 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGF 174
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG---HFNVFVGDLSPEVTD 146
V Y SA AI LNG + + + V +RE+ G NV+V +LS T+
Sbjct: 175 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTE 234
Query: 147 ATLFACFSVF-PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L F F P S V D G+SR FGFV+F N +DA A+ DLNGK ++++
Sbjct: 235 DNLKELFGNFGPITSVIVVRADD--GKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 292
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K KS E+ + + EKSN++ + N Q T +Y+ NL V
Sbjct: 293 VGRAQK-------------KSEREMQ--LKESFEKSNKETADRN-QGTNLYLKNLDGSVD 336
Query: 266 SVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+ + A GTI +V RD KG GFV + + +A A+ N +++ KP+
Sbjct: 337 DDEKLKELFA-EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 395
Query: 321 KCSWGSKPTPPG-------TSSTP-LPPPPAPHLPGF 349
+ + + P +PPP AP +P +
Sbjct: 396 YVALAQRKEERRARLQAQFSQMRPVMPPPVAPRMPMY 432
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 43/288 (14%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTL 105
+YVG++ V +A L +VFS G + ++ + + Y +V++ AA A+ L
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 106 NGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
N + G+PI++ ++ S R+ SG N+F+ +L + + L+ FS F +V
Sbjct: 104 NFTPVNGKPIRIMYSNRDPSSRK--SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKV 161
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ +G S+G+GFV + E AQ+AIN+LNG L ++++ +
Sbjct: 162 ATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVR------------- 207
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
QE+ N +P++ VYV NLS T +L F G I V
Sbjct: 208 ------------KQERENVFG---SPKFNNVYVKNLSESTTEDNLKELFGNF--GPITSV 250
Query: 285 RVQR-DKG----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V R D G FGFV + +A A++ N + K + K
Sbjct: 251 IVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK 298
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 128/284 (45%), Gaps = 49/284 (17%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+ FV F QE A AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
E TN VY+ N EV L F
Sbjct: 182 ELGAKAKEFTN----------------------VYIKNFGEEVDDESLKELFSKTL---- 215
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 216 -SVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKII 258
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 33/299 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 151 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 211 FS---KTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKK 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 267 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 310
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 311 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 367
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L S+VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKPI+ W +
Sbjct: 72 MNFDVIKGKPIRIMWSQR 89
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 292 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 351
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 352 GRIVGSKPLYVALAQRKEERK 372
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/329 (28%), Positives = 151/329 (45%), Gaps = 38/329 (11%)
Query: 32 PILSGNLPPRFDASTC----------RSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLI 80
P ++GN F A T +++++G + + ++ VF++ G K+I
Sbjct: 17 PPMNGNSEANFQAPTALVQPGTNEASKTLWMGEMEGWMDENFIKNVFTTVLGENVQVKVI 76
Query: 81 KKDKSS---YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYASS---QREDTSGH 132
+ S Y F++ F AA + LNG + + K+NWA +R+D
Sbjct: 77 RDRNSGNAGYCFIE-FASAEAAQKALNLNGTPVPNSNRAFKLNWASGGGLIDRRDDRGPE 135
Query: 133 FNVFVGDLSPEVTDATLFACF-SVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAI 191
+++FVGDL PEV + L + F S FP+C A++M D TG+SRG+GFV F ++ D Q A+
Sbjct: 136 YSIFVGDLGPEVNEFVLVSLFQSRFPSCKSAKIMTDAMTGQSRGYGFVRFSDEGDQQRAL 195
Query: 192 NDLNGKWLGNRQIRCN----------WAAKGATSGDEKQSSDSKSVVELTNGISDGQEKS 241
++ G + GNR +R + + A + + + + G+ S
Sbjct: 196 VEMQGVYCGNRPMRISTATPKTRTHQYGAHAPHAANAMMAPVPAHAANMQWGVPPQPYYS 255
Query: 242 --NEDAPEN---NPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVR 296
N P N +P TTV+VG LS VT +L F G I V++ KG GFV+
Sbjct: 256 GFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGF--GEITYVKIPPGKGCGFVQ 313
Query: 297 YSTHPEAALAIQMGNARILCGKPIKCSWG 325
+ A +AI + ++ SWG
Sbjct: 314 FVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 131/276 (47%), Gaps = 34/276 (12%)
Query: 64 LQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIF---GQPIK 116
L F TG + K+I+ ++ YGFV+++ +A + G HI QP +
Sbjct: 6 LHSCFGYTGEVVAIKVIRNKQTGQSEGYGFVEFYSHAAAEKVLEGFAG-HIMPNTDQPFR 64
Query: 117 VNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FPTCSDARVMWDQKTGRS 173
+NWA S +R D + ++FVGDL+ +V D TL FS + + A+V+ D TGRS
Sbjct: 65 INWASFSMGDRRSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRS 124
Query: 174 RGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS-SDSKSVVELTN 232
+G+GFV F + + A+ ++NG + R +R A TSG + S ++S +LTN
Sbjct: 125 KGYGFVRFGDDNEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTN 184
Query: 233 GISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDKGF 292
TTV+VG L V+ DL + F G I V++ K
Sbjct: 185 --------------------TTVFVGGLDPNVSEDDLRQTFSQY--GEISSVKIPVGKQC 222
Query: 293 GFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
GFV++ A A+Q N + + ++ SWG P
Sbjct: 223 GFVQFVQRKNAEDALQGLNGSTIGKQTVRLSWGRNP 258
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 23/186 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKSS----YGFVDYFDR 95
R D ++ S++VG++ V + L E FS ++G K++ + YGFV + D
Sbjct: 76 RSDIASDHSIFVGDLASDVNDTTLLETFSKRYSSVKGAKVVIDANTGRSKGYGFVRFGDD 135
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAY-----------ASSQREDTS-GHFNVFVGDLSPE 143
A+ +NG + +P+++ A S+ R D + VFVG L P
Sbjct: 136 NEKTHAMTEMNGVYCSTRPMRIGPATPRKTSGTSGPTGSAARSDGDLTNTTVFVGGLDPN 195
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
V++ L FS + S ++ ++ G FV F +++A+ A+ LNG +G +
Sbjct: 196 VSEDDLRQTFSQYGEISSVKIPVGKQCG------FVQFVQRKNAEDALQGLNGSTIGKQT 249
Query: 204 IRCNWA 209
+R +W
Sbjct: 250 VRLSWG 255
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 129/291 (44%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D SRGFGFV F E AQ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVVCDDHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
TN +YV NL V L F G +
Sbjct: 182 ELGARATAFTN----------------------IYVKNLPGHVDERGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD +GFGFV + H EA A+ N + G+ + K
Sbjct: 218 LSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQK 268
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ D S +GFV + +
Sbjct: 91 PGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L V + L
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SRGFGFV+F E+AQ A+ D+NG + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDD-SGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E N + E + +D N Q +YV NL + L +
Sbjct: 270 G---------------ERQNELKRRFEHTKQDR-LNRCQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQR 370
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD + FGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLRRY-QGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 370
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 135/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N R++ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALAQR 370
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDIKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 152/337 (45%), Gaps = 39/337 (11%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGF 89
I+ N P S ++++ N+ + N L + FS+ G + CK+ + + YGF
Sbjct: 115 IMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFGNILSCKVATEMSGESKGYGF 174
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG---HFNVFVGDLSPEVTD 146
V Y SA AI LNG + + + V +RE+ G NV+V +LS T+
Sbjct: 175 VQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENVFGSPKFNNVYVKNLSESTTE 234
Query: 147 ATLFACFSVF-PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
L F F P S V D G+SR FGFV+F N +DA A+ DLNGK ++++
Sbjct: 235 DNLKELFGNFGPITSVIVVRADD--GKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELY 292
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K KS E+ + + EKSN++ + N Q T +Y+ NL V
Sbjct: 293 VGRAQK-------------KSEREMQ--LKESFEKSNKETADRN-QGTNLYLKNLDGSVD 336
Query: 266 SVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+ + A GTI +V RD KG GFV + + +A A+ N +++ KP+
Sbjct: 337 DDEKLKELFA-EFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPL 395
Query: 321 KCSWGSKPTPPG-------TSSTP-LPPPPAPHLPGF 349
+ + + P +PPP AP +P +
Sbjct: 396 YVALAQRKEERRARLQAQFSQMRPVMPPPVAPRMPMY 432
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 43/289 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVT 104
S+YVG++ V +A L +VFS G + ++ + + Y +V++ AA A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN + G+PI++ ++ S R+ SG N+F+ +L + + L+ FS F +
Sbjct: 103 LNFTPVNGKPIRIMYSNRDPSSRK--SGAANIFIKNLDKSIDNKALYDTFSAFGNILSCK 160
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V + +G S+G+GFV + E AQ+AIN+LNG L ++++ +
Sbjct: 161 VATEM-SGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVR------------ 207
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
QE+ N +P++ VYV NLS T +L F G I
Sbjct: 208 -------------KQERENVFG---SPKFNNVYVKNLSESTTEDNLKELFGNF--GPITS 249
Query: 284 VRVQR-DKG----FGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V V R D G FGFV + +A A++ N + K + K
Sbjct: 250 VIVVRADDGKSRCFGFVNFENPDDAVHAVEDLNGKKFDDKELYVGRAQK 298
>gi|195620484|gb|ACG32072.1| nucleic acid binding protein [Zea mays]
gi|195625400|gb|ACG34530.1| nucleic acid binding protein [Zea mays]
Length = 369
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 34/292 (11%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIV 103
++++VG++ + L F +G + K+I+ ++ YGFV++F SA A+
Sbjct: 48 KTIWVGDLQYWMDENYLHNCFGPSGEVVTIKVIRNRQTGQSEGYGFVEFFSHASAEKALQ 107
Query: 104 TLNGRHIF---GQPIKVNWAYAS--SQREDTSGHFNVFVGDLSPEVTDATLFACFSV-FP 157
G H+ +P K+NWA S +R + + ++FVGDL+ +VTD L FS +
Sbjct: 108 NFTG-HVMPNTDRPFKLNWASYSMGEKRSEVASDHSIFVGDLAADVTDEMLLELFSSKYR 166
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
+ A+V+ D TGRSRG+GFV F + D A++++NG + R IR G
Sbjct: 167 SVKGAKVIIDANTGRSRGYGFVRFGDDNDKSHAMSEMNGVYCSTRPIRI---------GP 217
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
S T G SDG + SN TVYVG L V+ +L + F
Sbjct: 218 ATPRRSSGDSGSSTPGHSDG-DSSNR----------TVYVGGLDPNVSEDELRKAFAKY- 265
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKPT 329
+ V++ K GFV++ + +A A+Q N ++ + ++ SW P+
Sbjct: 266 --DLASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAVRLSWVRSPS 315
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 23/185 (12%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSST-GPLEGCKLIKKDKS----SYGFVDYFDR 95
R + ++ S++VG++ VT+ +L E+FSS ++G K+I + YGFV + D
Sbjct: 134 RSEVASDHSIFVGDLAADVTDEMLLELFSSKYRSVKGAKVIIDANTGRSRGYGFVRFGDD 193
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA----YASSQREDTSGHFN-------VFVGDLSPEV 144
+ A+ +NG + +PI++ A + T GH + V+VG L P V
Sbjct: 194 NDKSHAMSEMNGVYCSTRPIRIGPATPRRSSGDSGSSTPGHSDGDSSNRTVYVGGLDPNV 253
Query: 145 TDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 204
++ L F+ + S K + GFV F ++ DA+ A+ LNG +G + +
Sbjct: 254 SEDELRKAFAKYDLAS-------VKIPLGKQCGFVQFVSRTDAEEALQGLNGSLIGKQAV 306
Query: 205 RCNWA 209
R +W
Sbjct: 307 RLSWV 311
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRRSAALAIVT 104
S+ R+VYVG + P V+ L++ F+ L K+ + GFV + R A A+
Sbjct: 239 SSNRTVYVGGLDPNVSEDELRKAFAKY-DLASVKIPLGKQC--GFVQFVSRTDAEEALQG 295
Query: 105 LNGRHIFGQPIKVNWAYASSQRE 127
LNG I Q ++++W + S ++
Sbjct: 296 LNGSLIGKQAVRLSWVRSPSHKQ 318
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
S+YVG++HP+VT A+L E FS+ GP+ ++ + SS YG+V++ A A+ T
Sbjct: 20 SLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALNT 79
Query: 105 LNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARV 164
+N + G+P+++ W + SG NVFV L + + L+ F+ F T +V
Sbjct: 80 MNFDVLHGKPVRIMWCHRDPSLR-RSGVGNVFVNHLDASIDNKELYDLFAGFGTILSCKV 138
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDS 224
+ D+ +G GFV F +E A AI ++NG + R++ G ++ +
Sbjct: 139 VSDENG--PKGHGFVHFETREAADKAIKEMNGSLVKERKVFV-----GQFKRPNQREEER 191
Query: 225 KSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDV 284
++ +E Q+T VYV N + T L F G + V
Sbjct: 192 RAKME---------------------QFTNVYVKNFADGTTDEYLLEIFSQY--GPLSSV 228
Query: 285 RVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
++ D KGFGF+R+ H +A AI+ N + G+ I S K
Sbjct: 229 KIMTDDSGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRAQK 276
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 151/338 (44%), Gaps = 43/338 (12%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK--SSYGFVDYFDRRS 97
P S +V+V ++ + N L ++F+ G + CK++ + +GFV + R +
Sbjct: 99 PSLRRSGVGNVFVNHLDASIDNKELYDLFAGFGTILSCKVVSDENGPKGHGFVHFETREA 158
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQRED-----TSGHFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V +QRE+ NV+V + + TD L
Sbjct: 159 ADKAIKEMNGSLVKERKVFVGQFKRPNQREEERRAKMEQFTNVYVKNFADGTTDEYLLEI 218
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + S ++M D +G+S+GFGF+ F DA+ AI ++NGK G R+I + A K
Sbjct: 219 FSQYGPLSSVKIMTDD-SGKSKGFGFIRFECHADAKRAIEEVNGKQFGGRKIYVSRAQK- 276
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E++ + + E+ K N A + +++V NL+ L +
Sbjct: 277 ---KKEREEELQQKLEEI---------KQNRIAKYHG---MSLFVKNLAESTDDEHLRKI 321
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG----- 325
F T V V+ R KGFGFV +S+ EA A++ + ++L +P+ S+
Sbjct: 322 FAPFGTVTSAKVIVKGGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLYVSYARYKQE 381
Query: 326 -----------SKPTPPGTSSTPLPPPPAPHLP-GFSA 351
K +P + STP P P P GF A
Sbjct: 382 RRAYFASYYGKKKASPAKSPSTPDTSPSQPASPDGFMA 419
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 131/297 (44%), Gaps = 26/297 (8%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNG-----RHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFAC 152
A AI T+NG R +F K + R N++V +L ++ + L
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D G SRGFGFV+F E+AQ A+ D+NGK + RQ+ A K
Sbjct: 211 FSQFGKLLSVKVMKD-NNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D N Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRKFEQMKQDR-LNRYQGVNLYVKNLDDSIDDEKLRKE 313
Query: 273 FHALCVGTIEDVRVQ--RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F V T V + KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQR 370
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E F GP + C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEVIKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ SRGFGFV F E AQ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVVCDEHG--SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL ++ L F G +
Sbjct: 182 ELRARAMEFTN----------------------IYVKNLQVDMDEQGLQDLFSQF--GKL 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V +D +GFGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMKDNNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQK 268
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 132/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKEMFGKYGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + + GK I K
Sbjct: 220 VKVMTDDN-GKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQK 268
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEM 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + +VM D G+S+GFGFVSF EDAQ A++D+NGK + + I A K
Sbjct: 211 FGKYGPALSVKVMTDD-NGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 133/284 (46%), Gaps = 45/284 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + PQVT A+L E+F+ GP+ ++ + + Y +V+Y + A+
Sbjct: 75 SLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQ 134
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I G+P ++ W SQR+ +G N+F+ +L + + L F+ F T
Sbjct: 135 LNYSQIRGKPCRIMW----SQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFGTVLS 190
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D +G S+G+GFV + + E A++AI +NG L ++++
Sbjct: 191 CKVATDD-SGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVGQH------------ 237
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
IS + +S D E +T +YV NL +EV + F G I
Sbjct: 238 ------------ISRKERQSKID--EMKSHFTNLYVKNLDTEVGEEEFEGLFSQF--GPI 281
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+Q+D KGFGFV + H +A A++ + + + GKP+
Sbjct: 282 TSAVIQKDEEGNSKGFGFVNFENHEDAQRAVEELDNKEIHGKPV 325
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDRRSAALAIVTL 105
++++ N+ + N L + F++ G + CK+ D YGFV Y +A AI +
Sbjct: 163 NIFIKNLDQGIDNKALHDTFAAFGTVLSCKVATDDSGLSKGYGFVHYDSNEAAEAAIKAV 222
Query: 106 NGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + + + V + +R ++ HF N++V +L EV + FS F +
Sbjct: 223 NGMLLNDKKVFVGQHISRKERQSKIDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPIT 282
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE-- 218
A + D++ G S+GFGFV+F N EDAQ A+ +L+ K + + + A K + +E
Sbjct: 283 SAVIQKDEE-GNSKGFGFVNFENHEDAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELR 341
Query: 219 KQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCV 278
KQ +K EK+ + Q + +Y+ NL +V L F
Sbjct: 342 KQYEQAKY------------EKAGKY------QGSNLYIKNLEDDVDDEKLRAEFEPF-- 381
Query: 279 GTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
GTI +V RD KGFGFV +S+ EA A+ N +I+ KP+ + +
Sbjct: 382 GTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYVALAQR 435
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 92/216 (42%), Gaps = 41/216 (18%)
Query: 112 GQPIKVNWAYASSQREDTSGHFNV--FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQK 169
GQPI ++A A G V +VG+L P+VT+A LF F++ + RV D
Sbjct: 51 GQPIVQSYAAAPQPLGGQGGQGPVSLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAV 110
Query: 170 TGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVE 229
T RS G+ +V++ N D + A++ LN + + R W+ +
Sbjct: 111 TRRSLGYAYVNYLNYNDGERALDQLNYSQIRGKPCRIMWSQR------------------ 152
Query: 230 LTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD 289
G K+ + +++ NL + + LH F A GT+ +V D
Sbjct: 153 -----DPGLRKTGQG---------NIFIKNLDQGIDNKALHDTFAAF--GTVLSCKVATD 196
Query: 290 -----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
KG+GFV Y ++ A AI+ N +L K +
Sbjct: 197 DSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKV 232
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 253 TTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAALA 306
++YVG L +VT L F+ +G + VRV RD G+ +V Y + + A
Sbjct: 74 VSLYVGELDPQVTEAMLFEIFN--MIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERA 131
Query: 307 IQMGNARILCGKPIKCSWGSK 327
+ N + GKP + W +
Sbjct: 132 LDQLNYSQIRGKPCRIMWSQR 152
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 44/274 (16%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKSSYGFVDYFDRRSAALAIVTL 105
S+YVG++ P V L ++F+ P++ C+ + + Y +V++ + A+ A+ +L
Sbjct: 59 SLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASRAMDSL 118
Query: 106 NGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
N I +PI++ S R+ + SG NVF+ +L P + + L+ FS F T
Sbjct: 119 NYAPIRDRPIRIML----SNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSC 174
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D GRS+G+GFV F +E AQ+AI+ LNG L ++Q+ + ++ S
Sbjct: 175 KVAMD-AVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVR----RQDRSRS 229
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
+S +V P++T VYV NL E+T +L + F G I
Sbjct: 230 ESGAV----------------------PRFTNVYVKNLPKEITDDELKKTFGKY--GDIS 265
Query: 283 DVRVQRD-----KGFGFVRYSTHPEAALAIQMGN 311
V +D + FGFV + + AA+A++ N
Sbjct: 266 SAVVMKDQSGNSRSFGFVNFESPEAAAVAVEKMN 299
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 148/345 (42%), Gaps = 53/345 (15%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYG 88
I+ N P S +V++ N+ P + N L E FS+ G + CK+ + + K YG
Sbjct: 130 IMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFGTILSCKVAMDAVGRSK-GYG 188
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKV-NWAYASSQREDTSGHF----NVFVGDLSPE 143
FV + +A AI LNG + + + V ++ + SG NV+V +L E
Sbjct: 189 FVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRSESGAVPRFTNVYVKNLPKE 248
Query: 144 VTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQ 203
+TD L F + S A VM DQ +G SR FGFV+F + E A A+ +NG LG
Sbjct: 249 ITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFESPEAAAVAVEKMNGISLGEDV 307
Query: 204 IRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSE 263
+ A K + +E + + + + Q + +Y+ NL
Sbjct: 308 LYVGRAQKKSEREEELRRKFEQERISRFEKL----------------QGSNLYLKNLDDS 351
Query: 264 VTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V L F G + +V + +GFGFV YS+ EA+ A+ N +++ K
Sbjct: 352 VNDEKLKEMFSEY--GNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRK 409
Query: 319 PIKCSWGSKPTP--------------PGTSSTPLPPPPAPHLPGF 349
P+ ++ + PGT S P+P P +PGF
Sbjct: 410 PLYVAFAQRKEERRAHLQTLFTHIRSPGTMS-PIPSP----MPGF 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 75/192 (39%), Gaps = 40/192 (20%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++VGDL P V + L F+ RV D T RS G+ +V+F N EDA A++
Sbjct: 59 SLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDL-TRRSLGYAYVNFANPEDASRAMDS 117
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
LN + +R IR SN D
Sbjct: 118 LNYAPIRDRPIRIML--------------------------------SNRDPSTRLSGKG 145
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQ-----RDKGFGFVRYSTHPEAALAIQ 308
V++ NL + + L+ F A GTI +V R KG+GFV++ A AI
Sbjct: 146 NVFIKNLDPSIDNKALYETFSAF--GTILSCKVAMDAVGRSKGYGFVQFEKEETAQAAID 203
Query: 309 MGNARILCGKPI 320
N +L K +
Sbjct: 204 KLNGMLLNDKQV 215
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 99/175 (56%), Gaps = 9/175 (5%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDYFDRRSAALAIV 103
+ YVGN+ PQV+ LL E+F GP+ + KD+ + YGFV++ A AI
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNV-YVPKDRVTNLHQGYGFVEFRSEEDADYAIK 84
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPT-CSDA 162
LN ++G+PI+VN A + D N+F+G+L P+V + L+ FS F ++
Sbjct: 85 ILNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNP 142
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
++M D +TG SRGFGFVS+ + E + AI +N + L NR I ++A K T G+
Sbjct: 143 KIMRDPETGNSRGFGFVSYDSFESSDQAIEAMNNQHLCNRPITVSYAYKKDTKGE 197
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 40/199 (20%)
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+VG+L P+V++ L+ F + V D+ T +G+GFV FR++EDA AI L
Sbjct: 27 TYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKIL 86
Query: 195 NGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTT 254
N L + IR N K S D KS+ N
Sbjct: 87 NMIKLYGKPIRVN-----------KASQDKKSLDVGAN---------------------- 113
Query: 255 VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQ 308
+++GNL +V L+ F A V + + ++ RD +GFGFV Y + + AI+
Sbjct: 114 LFIGNLDPDVDEKLLYDTFSAFGV-IVTNPKIMRDPETGNSRGFGFVSYDSFESSDQAIE 172
Query: 309 MGNARILCGKPIKCSWGSK 327
N + LC +PI S+ K
Sbjct: 173 AMNNQHLCNRPITVSYAYK 191
>gi|148666752|gb|EDK99168.1| cytotoxic granule-associated RNA binding protein 1, isoform CRA_b
[Mus musculus]
Length = 293
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 94/167 (56%), Gaps = 14/167 (8%)
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
DARV+ D TG+S+G+GFVSF N+ DA++AI + G+WLG RQIR NWA + +
Sbjct: 41 DARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTY 100
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
S++K Q +E +++P TVY G ++S +T + + F G
Sbjct: 101 ESNTK------------QLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPF--GQ 146
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I ++RV DKG+ FVR+S+H AA AI N + G +KC WG +
Sbjct: 147 IMEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKE 193
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 25/144 (17%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA----------YASSQR---------E 127
YGFV +F++ A AI + G+ + G+ I+ NWA Y S+ + +
Sbjct: 56 YGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVSQ 115
Query: 128 DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDA 187
+ + V+ G ++ +T+ + FS F + RV D +G+ FV F + E A
Sbjct: 116 SSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPD------KGYSFVRFSSHESA 169
Query: 188 QSAINDLNGKWLGNRQIRCNWAAK 211
AI +NG + ++C W +
Sbjct: 170 AHAIVSVNGTTIEGHVVKCYWGKE 193
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 156/359 (43%), Gaps = 87/359 (24%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVT 104
S+YVG++HP V+ + L EVF+ GP+ ++ + + + SY +++Y + A A+ T
Sbjct: 9 SLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERALDT 68
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
LN I G+ ++ W SQR+ + SG N+F+ +L V L+ FS F
Sbjct: 69 LNNTPIKGKACRIMW----SQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFGNILS 124
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC----NWAAKGATS-- 215
+V+ D+ T S+GFGFV + +QE A+ AI +NG + N+++ + +GAT
Sbjct: 125 CKVVTDE-TNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFVGPFKSSKERGATQEV 183
Query: 216 -----------------------------------GDEKQSSD------------SKSVV 228
DEK S +K V
Sbjct: 184 KYTNVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEKGKSKGFGFANFEHADAAKGAV 243
Query: 229 ELTNG---------ISDGQEKSNEDAP-----ENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
E NG + Q+K +A E Q +Y+ NL + S L F
Sbjct: 244 ENENGKMFSGKVIYVGRAQKKLEREAELKHKFETKYQGVNLYIKNLDDSIDSDKLRATFS 303
Query: 275 ALCVGTIEDVRVQRD------KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
A GTI +V RD KGFGFV YST EA+ A+ + R++ KP+ ++ +
Sbjct: 304 AY--GTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYVAFAQR 360
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVT 104
++Y+ N+ + + L+ FS+ G + K+++ DK S +GFV Y A+ A+
Sbjct: 283 NLYIKNLDDSIDSDKLRATFSAYGTITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAE 342
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT 129
++GR + +P+ V +A QR+D
Sbjct: 343 MHGRMVGSKPLYVAFA----QRKDV 363
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 30/282 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++YV N+ +T++ L+ +F G + CK+++++ S +GFV + +SA A L+
Sbjct: 113 NLYVKNLDSSITSSCLERMFCPFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSARSALH 172
Query: 107 GRHIFGQPIKVNWAYASSQREDTSGH---FNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
G ++G+ + V +R +G+ NV+V +L VTD L FS + T S
Sbjct: 173 GSMVYGKKLFVAKFINKDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVV 232
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
VM D GRSRGFGFV+F N E+A+ A+ L G LG++++ A K DE++
Sbjct: 233 VMRD-GMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKKLFVGKALK----KDERR--- 284
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIED 283
E+ Q+ S+ + N +++ +YV NLS + L F C G I
Sbjct: 285 -----EMLK-----QKFSDNFIAKPNMRWSNLYVKNLSESMNETRLREIFG--CYGQIVS 332
Query: 284 VRVQ-----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+V R KGFGFV +S E+ A + N ++ GKPI
Sbjct: 333 AKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPI 374
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 131/291 (45%), Gaps = 51/291 (17%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVT 104
S+YVG++ P VT L + FS P+ L + + Y ++++ SA+ A+
Sbjct: 22 SLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASNAMTR 81
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + G+ +++ W+ + +R +G N++V +L +T + L F F +
Sbjct: 82 LNHSDLKGKAMRIMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSC 141
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V+ ++ G+S+GFGFV F ++ A SA + L+G + +++
Sbjct: 142 KVV--EENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKL------------------ 181
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
V + N K A N T VYV NL VT LH F GT+
Sbjct: 182 ---FVAKFIN-------KDERAAMAGNQDSTNVYVKNLIETVTDDCLHTLFSQY--GTVS 229
Query: 283 DVRVQRD-----KGFGFVRYSTHPEAA-------LAIQMGNARILCGKPIK 321
V V RD +GFGFV + +PE A +Q+G+ ++ GK +K
Sbjct: 230 SVVVMRDGMGRSRGFGFVNF-CNPENAKKAMESLCGLQLGSKKLFVGKALK 279
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 129/276 (46%), Gaps = 43/276 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG + P +T ALL +VFS GP+ ++ + K Y +V+Y D + AI
Sbjct: 51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQE 110
Query: 105 LNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
LN I G+P ++ W+ + R+ SG N+F+ +L P + + L FS F +
Sbjct: 111 LNYAEINGRPCRIMWSERDPAIRKKGSG--NIFIKNLHPAIDNKALHETFSTFGEVLSCK 168
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V D+ G SRGFGFV F+ + DA+ AI +NG + ++ + A D
Sbjct: 169 VALDE-NGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEV---YVAMHVPKKDR----- 219
Query: 224 SKSVVELTNGISDGQE-KSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
IS +E K+N +T +YV N+ E T + + F G I
Sbjct: 220 ----------ISKLEEAKAN---------FTNIYVKNIDVETTDEEFEQLFSQY--GEIV 258
Query: 283 DVRVQRD-----KGFGFVRYSTHPEAALAIQMGNAR 313
+++D KGFGFV + H AA A++ N +
Sbjct: 259 SAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGK 294
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 128/292 (43%), Gaps = 32/292 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++++ N+HP + N L E FS+ G + CK+ + + +GFV + + A AI +
Sbjct: 139 NIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAV 198
Query: 106 NGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + G + V R E+ +F N++V ++ E TD FS +
Sbjct: 199 NGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIV 258
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A + D + G+ +GFGFV+F + A A+ +LNGK ++ + A K +E +
Sbjct: 259 SAALEKDAE-GKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELK 317
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
+ +E Q +++ NL + L F GT
Sbjct: 318 KQYEQYRLEKLAKF----------------QGVNLFIKNLDDSIDDEKLKEEFAPY--GT 359
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I RV RD KGFGFV +S+ EA A+ N +I+ GKP+ + +
Sbjct: 360 ITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQR 411
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 10/87 (11%)
Query: 247 ENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTH 300
ENN ++YVG L +T L+ F L G I +RV RD G+ +V Y+ +
Sbjct: 46 ENN--NASLYVGELDPNITEALLYDVFSPL--GPISSIRVCRDAVTKASLGYAYVNYTDY 101
Query: 301 PEAALAIQMGNARILCGKPIKCSWGSK 327
AIQ N + G+P + W +
Sbjct: 102 EAGKKAIQELNYAEINGRPCRIMWSER 128
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + R +
Sbjct: 160 PSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFGNILSCKVVCDEHGSKGYGFVHFETRDA 219
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 220 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRL 279
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G S+GFGFV+F EDAQ A+ ++NGK L ++I A K
Sbjct: 280 FGKFGPALSVKVMTDE-SGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKK 338
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L Q++ Q +YV NL + L +
Sbjct: 339 G----ERQTELKRKFEQLK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 382
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 383 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQR 439
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 42/238 (17%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + LF FS
Sbjct: 134 AERALETMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFS 189
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F ++ A+ AI+ +NG L +R++
Sbjct: 190 AFGNILSCKVVCDEHG--SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGR----FK 243
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
S E+++ E TN VY+ N ++ + L R F
Sbjct: 244 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDLRLKRLFG 281
Query: 275 ALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G V+V D KGFGFV + H +A A++ N + L GK I K
Sbjct: 282 KF--GPALSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQK 337
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQELFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD + FGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQEL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLR-RYQGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQR 288
F V T R QR
Sbjct: 314 FSPYGVITSAKKRRQR 329
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 45/295 (15%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAAL 100
+T S+YVG + P V+ ALL ++FS GP+ ++ I K Y +V++ D S
Sbjct: 47 TTSASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRT 106
Query: 101 AIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFP 157
AI LN I G+P ++ W SQR+ G N+F+ +L P++ + L FSVF
Sbjct: 107 AIEKLNYSPIKGKPCRIMW----SQRDPALRKKGAGNIFIKNLHPDIDNKALHDTFSVFG 162
Query: 158 TCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGD 217
++ D+ TG+S+GFGFV F A A++ +NG L R++ + A+ + D
Sbjct: 163 NILSCKIATDE-TGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREV---YVAQHVSKKD 218
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+E E+ N +T VYV N+ + + F
Sbjct: 219 --------------------RESKLEEVKAN---FTNVYVKNVDVDTPEDEFTALFSKY- 254
Query: 278 VGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
G I + +++D +GFGF+ + H +AA A++ N G+ + K
Sbjct: 255 -GPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQK 308
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTL 105
++++ N+HP + N L + FS G + CK+ + +GFV + + +A A+ +
Sbjct: 139 NIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAI 198
Query: 106 NGRHIFGQPIKVNWAYASSQRE----DTSGHF-NVFVGDLSPEVTDATLFACFSVF-PTC 159
NG + G+ + V + RE + +F NV+V ++ + + A FS + P
Sbjct: 199 NGMMLNGREVYVAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTALFSKYGPIT 258
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
S A M G+ RGFGF++F N +DA A+ +LN +++ A K E
Sbjct: 259 SIA--MEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQKKYERLQEL 316
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
+ S +E Q ++V NL + L F G
Sbjct: 317 KKQYEASRLEKLAKY----------------QGVNLFVKNLDDSIDDEKLEAEFAPF--G 358
Query: 280 TIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
+I +V R+ K FGFV +ST EA AI N +I+ GKP+
Sbjct: 359 SITSAKVMRNEEGKSKNFGFVCFSTPEEATKAITEKNQQIVAGKPL 404
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY---GFVDYFDRRSAALAIVTL 105
+VYV N+ +FS GP+ + K + + GF+++ + AA A+ L
Sbjct: 232 NVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEEL 291
Query: 106 NGRHIFGQPIKVNWA-------------YASSQREDTSGH--FNVFVGDLSPEVTDATLF 150
N GQ + V A Y +S+ E + + N+FV +L + D L
Sbjct: 292 NDLEFKGQKLYVGRAQKKYERLQELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDDEKLE 351
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
A F+ F + + A+VM +++ G+S+ FGFV F E+A AI + N + + + + A
Sbjct: 352 AEFAPFGSITSAKVMRNEE-GKSKNFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 410
Query: 211 K 211
+
Sbjct: 411 R 411
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 142/291 (48%), Gaps = 27/291 (9%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSY----GFVDYFDRRSAALAIV 103
++++VG++ + L F+ T ++ K+I+ ++ Y GFV++ + +A +
Sbjct: 21 KTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNHSTAEKVLQ 80
Query: 104 TLNGRHIFGQPI--KVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPT 158
+ NG + I ++NWA +R D F++FVGDL+P+VTD L F S + +
Sbjct: 81 SFNGTQMPSTDIAFRLNWACFGIGERRPDQGPDFSIFVGDLAPDVTDYMLQETFQSRYSS 140
Query: 159 CSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA-KGATSGD 217
A+V+ D T RS+G+GFV F ++ + A+ ++ G + R +R + A K + +
Sbjct: 141 VKGAKVVMDTTTARSKGYGFVRFGDEAEKMRAMTEMAGVYCSTRPMRISTATPKKSLATI 200
Query: 218 EKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC 277
+ + V LT +N+P TTV+VG L V DL + F
Sbjct: 201 PPKGFQNFGVPPLT---------------DNDPSNTTVFVGGLDHSVKDEDLKQVFSQF- 244
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP 328
G I+ V++ K GFV++ T A A+Q + + + I+ SWG P
Sbjct: 245 -GDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHGSTIGQQTIRLSWGRSP 294
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 91/222 (40%), Gaps = 45/222 (20%)
Query: 131 GHFN-----VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQE 185
GH N ++VGDL + + L++CF+ A+V+ +++TG S G+GFV F N
Sbjct: 14 GHANGELKTLWVGDLQYWMDEGYLYSCFAHTSEVQVAKVIRNKQTGYSEGYGFVEFTNHS 73
Query: 186 DAQSAINDLNGKWLGNRQI--RCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNE 243
A+ + NG + + I R NWA G E
Sbjct: 74 TAEKVLQSFNGTQMPSTDIAFRLNWACFGI----------------------------GE 105
Query: 244 DAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALC-----VGTIEDVRVQRDKGFGFVRYS 298
P+ P + +++VG+L+ +VT L F + + D R KG+GFVR+
Sbjct: 106 RRPDQGPDF-SIFVGDLAPDVTDYMLQETFQSRYSSVKGAKVVMDTTTARSKGYGFVRFG 164
Query: 299 THPEAALAIQMGNARILCGKPIKCSWGSKPTPPGTSSTPLPP 340
E A+ +P++ S + P S +PP
Sbjct: 165 DEAEKMRAMTEMAGVYCSTRPMRISTAT----PKKSLATIPP 202
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 38 LPPRFDAS-TCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSSYGFVDYFDRR 96
+PP D + +V+VG + V + L++VFS G ++ K+ GFV ++ R
Sbjct: 210 VPPLTDNDPSNTTVFVGGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNC--GFVQFYTRA 267
Query: 97 SAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFN 134
SA A+ L+G I Q I+++W + + ++ FN
Sbjct: 268 SAEEALQKLHGSTIGQQTIRLSWGRSPANKQQVQPEFN 305
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 40/338 (11%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGF 89
++ N P S ++++ N+ + N L E FSS G + CK+ + +GF
Sbjct: 113 VMYSNRDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSFGTILSCKVAMDEGGQSKGFGF 172
Query: 90 VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTD 146
V Y +A AI +LNG I +P+ V +R+ D + NVFV +LS T
Sbjct: 173 VQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTK 232
Query: 147 ATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRC 206
L F + + A VM G+SR FGF++F N + A A+ +LNGK + +++
Sbjct: 233 EDLLKIFGEYGNITSAVVMIGMD-GKSRCFGFINFENPDAASRAVQELNGKKINDKE--- 288
Query: 207 NWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
W A E++ + ++ +D + N +Y+ NL +
Sbjct: 289 -WYVGRAQKKSEREMELKRRFEQILKDAADKYQGLN------------LYLKNLDDSIGD 335
Query: 267 VDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
L F G I +V RD KG GFV +ST EA+ A+ N +++ GKP+
Sbjct: 336 DQLRELFSNF--GKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMNGKMISGKPLY 393
Query: 322 CSWGSKPTPPGT----------SSTPLPPPPAPHLPGF 349
++ + + P+ P AP LP +
Sbjct: 394 VAFAQRKEDRKAMLQAQFSQMRPAVPMTPTLAPRLPMY 431
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 41/279 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTG---PLEGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++ V+++ L E+FS G + C+ + +S Y +V++ + AA A+
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 105 LNGRHIFGQPIKVNWAY--ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDA 162
LN + +PI+V ++ SS+R SG N+F+ +L + + +L FS F T
Sbjct: 101 LNFAPLNNKPIRVMYSNRDPSSRR---SGSANIFIKNLDKMIDNKSLHETFSSFGTILSC 157
Query: 163 RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSS 222
+V D+ G+S+GFGFV + +E AQ+AI LNG + ++ + +
Sbjct: 158 KVAMDE-GGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLR----------- 205
Query: 223 DSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTIE 282
K D + ++ V+V NLS T DL + F T
Sbjct: 206 -----------------KQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFGEYGNITSA 248
Query: 283 DVRVQRD---KGFGFVRYSTHPEAALAIQMGNARILCGK 318
V + D + FGF+ + A+ A+Q N + + K
Sbjct: 249 VVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDK 287
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 253 TTVYVGNLSSEVTSVDLHRHF----HALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQ 308
T++YVG+L V+ L+ F + V DV +R G+ +V ++ +AA A++
Sbjct: 40 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALE 99
Query: 309 MGNARILCGKPIKCSWGSK 327
+ N L KPI+ + ++
Sbjct: 100 VLNFAPLNNKPIRVMYSNR 118
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP+ + +I + Y +V++ A + T
Sbjct: 3 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVLET 62
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+FV +L + + LF FS F
Sbjct: 63 MNLDVIKGKPVRIMW----SQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILS 118
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L
Sbjct: 119 CKVVSDENG--SKGYGFVHFETQESAEKAIEKMNGIVL---------------------- 154
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
KS+ +E+ E ++T VY+ N ++ + L F AL
Sbjct: 155 ---KSLKVFVGHFKSRKERELELGARAR-EFTNVYIKNFGEDMDNARLGEIFGRFGRALS 210
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D R R KGFGFV Y+TH +A A+ N + L G+ I K
Sbjct: 211 VKVMTDER-GRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQK 259
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 34/301 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + FS G + CK++ + S YGFV + + S
Sbjct: 82 PSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFGNILSCKVVSDENGSKGYGFVHFETQES 141
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT------SGHF-NVFVGDLSPEVTDATLF 150
A AI +NG I + +KV + S++E + F NV++ + ++ +A L
Sbjct: 142 AEKAIEKMNG--IVLKSLKVFVGHFKSRKERELELGARAREFTNVYIKNFGEDMDNARLG 199
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F F +VM D++ GRS+GFGFVS+ EDAQ A++++NGK L R+I A
Sbjct: 200 EIFGRFGRALSVKVMTDER-GRSKGFGFVSYATHEDAQRAVDEMNGKELNGRRIYVGRAQ 258
Query: 211 KGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLH 270
K E+Q+ + ++ Q++ Q +YV NL + L
Sbjct: 259 KKG----ERQTELKRHFEQIK------QDRVTRY------QGVNLYVKNLDDTIDDERLR 302
Query: 271 RHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGS 326
F GTI +V + +GFGFV +S EAA A+ N +++ KP+ +
Sbjct: 303 TEFSPF--GTITSAKVMMEGGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALAQ 360
Query: 327 K 327
+
Sbjct: 361 R 361
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 141/299 (47%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+I + S YGFV + ++++
Sbjct: 396 PSLRKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILSCKVISDENGSKGYGFVHFENQQA 455
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + V + +RE G NV++ + ++ + L
Sbjct: 456 ADKAIEKMNGVRLNNLKVYVGRFKSRKERELELGARAREFTNVYIKNFGEDMDNDRLTEV 515
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVS+ EDAQ A++++NGK ++I A K
Sbjct: 516 FGKFGHALSVKVMTDE-SGKSKGFGFVSYEKHEDAQRAVDEMNGKEFNGKRIYVGRAQKK 574
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ QE+S+ Q +YV NL + L +
Sbjct: 575 G----ERQTELKRHFEQVK------QERSSRY------QGVNLYVKNLDDSIDDERLRKA 618
Query: 273 FHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V + +GFGFV +S EAA A+ N +++ KP+ + +
Sbjct: 619 FSPF--GTITSAKVMMEGGHSRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALAQR 675
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 131/290 (45%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++H VT A+L E FS GP+ + ++ + Y +V++ A + T
Sbjct: 317 SLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVLET 376
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 377 MNLDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSAFGNILS 432
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F NQ+ A AI +NG L N ++
Sbjct: 433 CKVISDENG--SKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYVGRF------------ 478
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
S+ EL G ++ E +T VY+ N ++ + L F HAL
Sbjct: 479 -KSRKERELELGA-----RARE--------FTNVYIKNFGEDMDNDRLTEVFGKFGHALS 524
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV Y H +A A+ N + GK I K
Sbjct: 525 VKVMTD-ESGKSKGFGFVSYEKHEDAQRAVDEMNGKEFNGKRIYVGRAQK 573
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 29/299 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK-----KDKSSYGFVDYFDRRSAALAIV 103
++++G + P + ++ ++ G K+I+ + + Y FVD F +AA +
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 125
Query: 104 TLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
+LNG + + K+NWA A R+D +++FVGDL PEV + L + F S F
Sbjct: 126 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 185
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA------- 209
P+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 186 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 245
Query: 210 ---AKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
A GA G + + G + N+ NN TTV+VG LS VT
Sbjct: 246 SLGAAGAM-GMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNN---TTVFVGGLSGYVTE 301
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+L F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 302 DELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 358
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
+++V N+ + N L + S+ G + CK++ + S YGFV + +A AI +N
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 107 GRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFACFSVFPTCSD 161
G + + + V + +RE G F NV++ + ++ D L F F
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+
Sbjct: 220 VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT 274
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
++ ++ Q++ Q +YV NL + L + F GTI
Sbjct: 275 ELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLWKAFSPF--GTI 320
Query: 282 EDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 321 TSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALHT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + G N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYST 299
+ P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 PKDAEHALHTMNFDVIKGKPLRIMWSQR 89
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 29/299 (9%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIK-----KDKSSYGFVDYFDRRSAALAIV 103
++++G + P + ++ ++ G K+I+ + + Y FVD F +AA +
Sbjct: 67 TLWMGELEPWIDENFVRNLWFQMGEQVNVKMIRDKFSGRSNAGYCFVD-FASPAAAAKAL 125
Query: 104 TLNGRHI--FGQPIKVNWA----YASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVF 156
+LNG + + K+NWA A R+D +++FVGDL PEV + L + F S F
Sbjct: 126 SLNGTPMPNTNRLFKLNWATGGGLADRSRDDRGPEYSIFVGDLGPEVNEYVLVSLFQSRF 185
Query: 157 PTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA------- 209
P+C A++M D +G SRG+GFV F ++ D Q A++++ G + GNR +R + A
Sbjct: 186 PSCKSAKIMTDPISGMSRGYGFVRFSDENDQQRALSEMQGVYCGNRPMRISTATPKNKGP 245
Query: 210 ---AKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTS 266
A GA G + + G + N+ NN TTV+VG LS VT
Sbjct: 246 SLGAAGAM-GMPGPAGMYPPMGAPPMGFYGAPQPMNQFTDPNN---TTVFVGGLSGYVTE 301
Query: 267 VDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWG 325
+L F G I V++ KG GFV++ A +AI + ++ SWG
Sbjct: 302 DELRSFFQGF--GEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 358
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 134/283 (47%), Gaps = 47/283 (16%)
Query: 48 RSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIV 103
RS+YVG++ V L ++FS P+ ++ + Y +V++ + + AA A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 104 TLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCS 160
LN + G+PI++ + S R+ T SGH NVF+ +L ++ + L+ F+ F
Sbjct: 93 VLNFTPLNGKPIRIMF----SHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVL 148
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
+V D G+S+G+GF+ F N+EDAQSAIN LNG + +R++
Sbjct: 149 SCKVAVD-NNGQSKGYGFIQFENEEDAQSAINRLNGMLVNDREVYV-------------- 193
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
V L ++G +P++T VYV NLS + DL + F + G
Sbjct: 194 ---GPFVRRLERIEANG-----------SPKFTNVYVKNLSETTSDEDLKKIFSSY--GA 237
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGK 318
I V +D +GFGFV + + AA A++ N K
Sbjct: 238 ITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDK 280
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 136/300 (45%), Gaps = 34/300 (11%)
Query: 43 DASTCRS----VYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK---SSYGFVDYFDR 95
D +T RS V++ N+ ++ N L E F+S GP+ CK+ + YGF+ + +
Sbjct: 112 DPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENE 171
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG---HFNVFVGDLSPEVTDATLFAC 152
A AI LNG + + + V +R + +G NV+V +LS +D L
Sbjct: 172 EDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTNVYVKNLSETTSDEDLKKI 231
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS + + A VM DQ G+SRGFGFV+F++ + A +A+ LNG ++ W
Sbjct: 232 FSSYGAITSAIVMKDQ-NGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDKV----WYVGR 286
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+++ + N + + +N +Y+ NL + L
Sbjct: 287 AQRKGEREAELKAKFEQERNSRYEKMKAAN------------LYLKNLGDTIDEERLKEL 334
Query: 273 FHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V D KG GFV +ST EA+ A+ N +++ KP+ + +
Sbjct: 335 FSEF--GSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAIAQR 392
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 137/290 (47%), Gaps = 30/290 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
+++V N+ + N L + S+ G + CK++ + S YGFV + +A AI +N
Sbjct: 100 NIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 159
Query: 107 GRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFACFSVFPTCSD 161
G + + + V + +RE G F NV++ + ++ D L F F
Sbjct: 160 GMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K E+Q+
Sbjct: 220 VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV----ERQT 274
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
++ ++ Q++ Q +YV NL + L + F GTI
Sbjct: 275 ELKRTFEQMK------QDRITRY------QVVNLYVKNLDDGIDDERLWKAFSPF--GTI 320
Query: 282 EDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 321 TSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 44/290 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSSNYAYVNFQHPKDAEHALHT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + G N+FV +L + + L+ S F
Sbjct: 72 MNFDVIKGKPLRIMW----SQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQ----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH----ALC 277
E N VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD------KGFGFVRYST 299
+ P Y T +YVG+L +VT L+ F G I +RV RD + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSP--AGPILSIRVCRDLITRGSSNYAYVNFQH 61
Query: 300 HPEAALAIQMGNARILCGKPIKCSWGSK 327
+A A+ N ++ GKP++ W +
Sbjct: 62 PKDAEHALHTMNFDVIKGKPLRIMWSQR 89
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +++V N+ + N L + S+ G + CK++ + S YGFV + +
Sbjct: 91 PSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG----HF-NVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G F NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL ++ L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QVVNLYVKNLDDDIDDERLRKA 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R +GFGFV +S+ EA A+ N I+ KP+ S +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYVSLAHR 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 40/288 (13%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + LI + S+Y +V++ + A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPKDAEHALDT 71
Query: 105 LNGRHIFGQPIKVNWA-YASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDAR 163
+N I G+P+++ W+ + S R+ SG N+FV +L + + L+ S F +
Sbjct: 72 MNFDVIKGKPVRIMWSQHDPSLRK--SGVGNIFVKNLDKSINNKALYDTVSAFGNILSCK 129
Query: 164 VMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQSSD 223
V+ D+ S+G+GFV F E A+ AI +NG L +R++ S E+++
Sbjct: 130 VVCDENG--SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREAEL 183
Query: 224 SKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALCVG 279
E N VY+ N ++ L F AL V
Sbjct: 184 GAKAKEFPN----------------------VYIKNFGEDMDDERLKDLFGKFGPALSVK 221
Query: 280 TIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 222 VMTD-ESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQK 268
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 248 NNPQYTT--VYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHP 301
+ P Y T +YVG+L +VT L+ F L + D+ +R + +V +
Sbjct: 4 STPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQHPK 63
Query: 302 EAALAIQMGNARILCGKPIKCSW 324
+A A+ N ++ GKP++ W
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMW 86
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERVSEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 270 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 100/237 (42%), Gaps = 40/237 (16%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS
Sbjct: 65 AERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 120
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F QE A+ +NG L +R++
Sbjct: 121 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERVSEKMNGMLLNDRKVFVGR----FK 174
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
S E+++ E TN VY+ N ++ L F
Sbjct: 175 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFG 212
Query: 275 ----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
AL V + D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 213 KFGPALSVKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 45 STCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAAL 100
++ S+YVG++ P V+ A L ++FS G + ++ I K Y +V++ D +
Sbjct: 35 NSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRK 94
Query: 101 AIVTLNGRHIFGQPIKVNWAYAS-SQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTC 159
AI LN I G+ ++ W+ S R+ SG N+F+ +L P++ + L+ FSVF
Sbjct: 95 AIDQLNYTPIKGRLCRIMWSQRDPSLRKKGSG--NIFIKNLHPDIDNKALYDTFSVFGDI 152
Query: 160 SDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEK 219
+++ D+ G+S+GFGFV F + A+ AI+ LNG L ++I
Sbjct: 153 LSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYV------------- 198
Query: 220 QSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVG 279
L+ D Q E YT +YV N++SE T F G
Sbjct: 199 -------APHLSRKERDSQ------LEETKAHYTNLYVKNINSETTDEKFQEMFAQF--G 243
Query: 280 TIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
I +++D KGFGFV Y H +A A++ N L G+ + K
Sbjct: 244 PIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQK 296
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 128/285 (44%), Gaps = 32/285 (11%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++++ N+HP + N L + FS G + K+ + +GFV + + +A AI L
Sbjct: 127 NIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDAL 186
Query: 106 NGRHIFGQPIKV----NWAYASSQREDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCS 160
NG + GQ I V + SQ E+T H+ N++V +++ E TD F+ F
Sbjct: 187 NGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQFGPIV 246
Query: 161 DARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQ 220
A + D G+ +GFGFV++ N EDA A+ LN L ++ A K
Sbjct: 247 SASLEKD-ADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQK--------- 296
Query: 221 SSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGT 280
++ V++ Q ++ Q ++V NL V L F GT
Sbjct: 297 KNERMHVLK-------KQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPY--GT 347
Query: 281 IEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
I +V R KGFGFV +ST EA AI N +I+ GKP+
Sbjct: 348 ITSAKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPL 392
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 19/181 (10%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTL 105
++YV NI+ + T+ QE+F+ GP+ L K +GFV+Y + A A+ L
Sbjct: 220 NLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEAL 279
Query: 106 NGRHIFGQPIKVNWAYASSQR-------------EDTSGH--FNVFVGDLSPEVTDATLF 150
N + G+ + V A ++R E + + N+FV +L V D L
Sbjct: 280 NESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLE 339
Query: 151 ACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAA 210
F+ + T + A+VM + G+S+GFGFV F E+A AI + N + + + + A
Sbjct: 340 EEFAPYGTITSAKVMRSE-NGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQ 398
Query: 211 K 211
+
Sbjct: 399 R 399
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 131/287 (45%), Gaps = 41/287 (14%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH-ALCVGT 280
E TN VY+ N ++ L F AL V
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFGPALSVKV 219
Query: 281 IEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
+ D + KGFGFV + H +A A+ N + L GK I K
Sbjct: 220 MTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 265
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 33/299 (11%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F P S +VM D+ +G+S+GFGFVSF EDAQ A++++NGK L +QI A K
Sbjct: 211 FG--PALS-VKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + ++ Q++ Q +YV NL + L +
Sbjct: 267 V----ERQTELKRKFEQMK------QDRITRY------QGVNLYVKNLDDGIDDERLRKE 310
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 311 FSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 367
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 135/299 (45%), Gaps = 29/299 (9%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK+ + S YGFV + +
Sbjct: 91 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYGFVHFETEEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHFN-VFVGDLSPEVTDATLFAC 152
A AI +NG + G+ + V +R D FN V++ + E+ D +
Sbjct: 151 ARQAIEKVNGMLLNGKKVYVGKFIPRKERIALLGDKMKRFNNVYIKNFGDELDDDKIREL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F F A+VM D+ G+SRGFGFVS+ E A+ A+++LNG LG ++ A
Sbjct: 211 FDPFGKIISAKVMTDE-IGKSRGFGFVSYEEPEAAEKAVDNLNGMELGGGKV---LYAGR 266
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
A E+Q+ + D EK + N Q +YV NL V L +
Sbjct: 267 AQKKAERQAE-----------LKDKFEKIKMERI-NRYQGVNLYVKNLDDVVDDERLRKE 314
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F GTI RV R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 315 FSQF--GTITSARVMSEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIVSKPLYVALAQR 371
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 54/286 (18%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGP---LEGCK-LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS+ GP + C+ +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+PI++ W SQR+ + SG NVF+ +L + + L+ FS F
Sbjct: 72 MNFDTIKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
++ D+ S+G+GFV F +E A+ AI +NG L +++ K
Sbjct: 128 CKIASDENG--SKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYVG-----------KFI 174
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+ + L + + ++ VY+ N E+ + F G I
Sbjct: 175 PRKERIALLGDKMK---------------RFNNVYIKNFGDELDDDKIRELFDPF--GKI 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAAL-------AIQMGNARIL 315
+V D +GFGFV Y PEAA +++G ++L
Sbjct: 218 ISAKVMTDEIGKSRGFGFVSYE-EPEAAEKAVDNLNGMELGGGKVL 262
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 38/191 (19%)
Query: 134 NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAIND 193
+++VGDL P+VT+A LF FS RV D T RS G+ +V+F+ DA+ A++
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 194 LNGKWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYT 253
+N + R IR W+ ++ S KS V
Sbjct: 72 MNFDTIKGRPIRIMWS--------QRDPSLRKSGV------------------------G 99
Query: 254 TVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD----KGFGFVRYSTHPEAALAIQM 309
V++ NL + + L+ F A G I ++ D KG+GFV + T A AI+
Sbjct: 100 NVFIKNLDKSIDNKALYDTFSAF--GNILSCKIASDENGSKGYGFVHFETEEAARQAIEK 157
Query: 310 GNARILCGKPI 320
N +L GK +
Sbjct: 158 VNGMLLNGKKV 168
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 101/183 (55%), Gaps = 7/183 (3%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDR 95
P + + ++YVG + +VT+A+L E+F +GP+ + + +GFV++
Sbjct: 5 PILERNQDATIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGE 64
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSV 155
A AI +N ++G+PIKVN A A + D N+FVG+L PEV + LF FS
Sbjct: 65 EDADYAIKIMNMIKLYGKPIKVNKASAHEKNMDVGA--NIFVGNLDPEVDEKLLFDTFSA 122
Query: 156 FPTCSDA-RVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F ++M D +TG S+GF FV+F + E + SAI ++G++L NR I ++A K
Sbjct: 123 FGVILQVPKIMRDAETGNSKGFAFVNFASFEASDSAIEAMSGQFLCNRAITVSYAFKKDA 182
Query: 215 SGD 217
G+
Sbjct: 183 KGE 185
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 251 QYTTVYVGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRDK------GFGFVRYSTHPEAA 304
Q T+YVG L +VT L F + G + V + +D+ GFGFV + +A
Sbjct: 11 QDATIYVGGLDEKVTDAILWELF--VQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDAD 68
Query: 305 LAIQMGNARILCGKPIKCSWGS 326
AI++ N L GKPIK + S
Sbjct: 69 YAIKIMNMIKLYGKPIKVNKAS 90
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 136/299 (45%), Gaps = 30/299 (10%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFV 90
I+ P S ++++ N+ + N L + FS+ G + CK++ + S YGFV
Sbjct: 129 IMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFV 188
Query: 91 DYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVT 145
+ + +A AI +NG + + + V + +RE G NV++ + ++
Sbjct: 189 HFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMD 248
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
D L F F +V+ D+ +G+S+GFGFVSF EDA+ A++++NGK L +QI
Sbjct: 249 DERLKDLFGKFGPALSVKVVTDE-SGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIY 307
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K VE + E+ +D Q +YV NL +
Sbjct: 308 VGRAQKK---------------VERQTELKRKFEQMKQDRI-TRYQGVNLYVKNLDDGID 351
Query: 266 SVDLHRHFHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
L + F GTI +V R KGFGFV +S+ EA A+ N RI+ KP+
Sbjct: 352 DERLRKEFSPF--GTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 408
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 40/230 (17%)
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFS 154
A A+ T+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS
Sbjct: 110 AERALDTMNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS 165
Query: 155 VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGAT 214
F +V+ D+ S+G+GFV F QE A+ AI +NG L +R++
Sbjct: 166 AFGNILSCKVVCDENG--SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR----FK 219
Query: 215 SGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFH 274
S E+++ E TN VY+ N ++ L F
Sbjct: 220 SRKEREAELGARAKEFTN----------------------VYIKNFGEDMDDERLKDLFG 257
Query: 275 ----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
AL V + D + KGFGFV + H +A A+ N + L GK I
Sbjct: 258 KFGPALSVKVVTD-ESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQI 306
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 130/247 (52%), Gaps = 17/247 (6%)
Query: 87 YGFVDYFDRRSAALAIVTLNGRHI--FGQPIKVNWAYAS--SQREDTSGHFNVFVGDLSP 142
YGFV++F +A + G + QP ++NWA S +R D ++FVGDL+
Sbjct: 15 YGFVEFFSHAAAEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLAS 74
Query: 143 EVTDATLFACFS-VFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGN 201
+V+D+ L F+ +P+ A+V++D TGRS+G+GFV F ++ + A+ ++NG + +
Sbjct: 75 DVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSS 134
Query: 202 RQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLS 261
R +R A +SG ++Q S +NG S +S+ D+ TT++VG L
Sbjct: 135 RPMRIGAATPRKSSGYQQQYSSHGGYA--SNGAS---VQSDGDSMN-----TTIFVGGLD 184
Query: 262 SEVTSVDLHRHFHALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIK 321
V+ DL + F G I V++ KG GFV+++ A A+Q N ++ + ++
Sbjct: 185 PNVSDEDLRQPFSQY--GEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVR 242
Query: 322 CSWGSKP 328
SWG P
Sbjct: 243 LSWGRNP 249
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 32/195 (16%)
Query: 41 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGP-LEGCKLIKKDKSS----YGFVDYFDR 95
R D S++VG++ V+++LL E F+ P ++ K++ + YGFV + D
Sbjct: 58 RSDNGPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDE 117
Query: 96 RSAALAIVTLNGRHIFGQPIKVNWA-----------------YASS----QREDTSGHFN 134
+ A+ +NG + +P+++ A YAS+ Q + S +
Sbjct: 118 NERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTT 177
Query: 135 VFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDL 194
+FVG L P V+D L FS + ++ +G GFV F N+ +A+ A+ L
Sbjct: 178 IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEDALQKL 231
Query: 195 NGKWLGNRQIRCNWA 209
NG +G + +R +W
Sbjct: 232 NGTVIGKQTVRLSWG 246
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL-IKKDKSSYGFVDYFDRRSAALAIVTLNG 107
+++VG + P V++ L++ FS G + K+ + K GFV + +R +A A+ LNG
Sbjct: 177 TIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGK---GCGFVQFANRNNAEDALQKLNG 233
Query: 108 RHIFGQPIKVNWAYASSQREDTS 130
I Q ++++W + ++ S
Sbjct: 234 TVIGKQTVRLSWGRNPANKQANS 256
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 146/345 (42%), Gaps = 51/345 (14%)
Query: 33 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YG 88
I+ + P S ++++ N+ + + L + FSS G + CK I D S YG
Sbjct: 106 IMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCK-IATDASGLSKGYG 164
Query: 89 FVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVT 145
FV + SA AI LNG I + + V RE+ + NV+V +LS T
Sbjct: 165 FVQFDSEESAQNAIDKLNGMLINDKQVYVGHFLRKQDRENALSKTKFNNVYVKNLSESTT 224
Query: 146 DATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 205
D L F + T + A +M D G+SR FGFV+F N +DA A+ LNGK + +++
Sbjct: 225 DEELMKFFGEYGTITSAVIMRD-ADGKSRCFGFVNFENPDDAAKAVEGLNGKKVDDKEWY 283
Query: 206 CNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVT 265
A K + E + +S+ E + Q +Y+ NL ++
Sbjct: 284 VGKAQKKSEREQELKGRFEQSIKESADKY----------------QGVNLYLKNLDDTIS 327
Query: 266 SVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
L F GTI +V RD +G GFV +ST EA+ A+ N +++ GKP+
Sbjct: 328 DEKLKEMFAEY--GTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMNGKMIAGKPL 385
Query: 321 KCSWGSKP-------------------TPPGTSSTPLPPPPAPHL 346
+ + TP PL PP AP L
Sbjct: 386 YVALAQRKEDRRARLQAQFSQMRPVAITPSVAPRMPLYPPGAPGL 430
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 43/307 (14%)
Query: 21 HPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEG---C 77
H S ++AP P N P + S+YVG++ V +A L ++F+ + C
Sbjct: 8 HQSPVSAP--PPNGVANAPNNPNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVC 65
Query: 78 KLIKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVF 136
+ + +S YG+V++ + + AA A+ LN + +PI++ +++ SG N+F
Sbjct: 66 RDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNNRPIRIMYSHRDPSLR-KSGTANIF 124
Query: 137 VGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNG 196
+ +L + L FS F ++ D +G S+G+GFV F ++E AQ+AI+ LNG
Sbjct: 125 IKNLDKAIDHKALHDTFSSFGLILSCKIATD-ASGLSKGYGFVQFDSEESAQNAIDKLNG 183
Query: 197 KWLGNRQIRCNWAAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVY 256
+ ++Q+ G + D ++ + T ++ VY
Sbjct: 184 MLINDKQVYV---------GHFLRKQDRENALSKT-------------------KFNNVY 215
Query: 257 VGNLSSEVTSVDLHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGN 311
V NLS T +L + F GTI + RD + FGFV + +AA A++ N
Sbjct: 216 VKNLSESTTDEELMKFFGEY--GTITSAVIMRDADGKSRCFGFVNFENPDDAAKAVEGLN 273
Query: 312 ARILCGK 318
+ + K
Sbjct: 274 GKKVDDK 280
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 244 DAPENNPQY--TTVYVGNLSSEVTSVDLHRHFHALCVGTI----EDVRVQRDKGFGFVRY 297
+AP N Q+ T++YVG+L V L+ F+ + D+ +R G+G+V +
Sbjct: 22 NAPNNPNQFVTTSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYGYVNF 81
Query: 298 STHPEAALAIQMGNARILCGKPIKCSWGSK 327
S +AA A+ + N L +PI+ + +
Sbjct: 82 SNPQDAARALDVLNFTPLNNRPIRIMYSHR 111
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 137/299 (45%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S +V++ N+ + N L + FS+ G + CK++ + S Y FV + + +
Sbjct: 104 PSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQEA 163
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + EV D +L
Sbjct: 164 ADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKEL 223
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G+S+GFGFVS+ EDA A+ ++NGK + + I A K
Sbjct: 224 FSQFGKTLSVKVMRD-PSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKK 282
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
E+Q+ + +L QE+ + Q +Y+ NL + L +
Sbjct: 283 V----ERQAELKRKFEQLK------QERISRY------QGVNLYIKNLDDTIDDEKLRKE 326
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 327 FSPF--GSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 383
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 131/297 (44%), Gaps = 59/297 (19%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CK-LIKKDKSSYGFVDY--------FDRR 96
S+YVG++H VT A+L E FS GP+ C+ +I + Y +V++
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTSTS 71
Query: 97 SAAL-----AIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDAT 148
S+ L A+ T+N I G+PI++ W SQR+ + SG NVF+ +L + +
Sbjct: 72 SSPLTVTERALDTMNFDVIKGKPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKA 127
Query: 149 LFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNW 208
L+ FS F +V+ D+ S+G+ FV F QE A AI +NG L +R++
Sbjct: 128 LYDTFSAFGNILSCKVVCDENG--SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGR 185
Query: 209 AAKGATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVD 268
S E+++ E TN VY+ N EV
Sbjct: 186 ----FKSRKEREAELGAKAKEFTN----------------------VYIKNFGEEVDDES 219
Query: 269 LHRHFHALCVGTIEDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
L F G V+V RD KGFGFV Y H +A A++ N + + GK I
Sbjct: 220 LKELFSQF--GKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKVI 274
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLN 106
++Y+ N+ + + L++ FS G + K++ +D S +GFV + A A+ +N
Sbjct: 308 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMN 367
Query: 107 GRHIFGQPIKVNWAYASSQRE 127
GR + +P+ V A +R+
Sbjct: 368 GRIVGSKPLYVALAQRKEERK 388
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 46/291 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPL---EGCKLIKKDKS-SYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ C+ + +S Y ++++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N + GQPI++ W SQR+ SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFEMLKGQPIRIMW----SQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V D+ SRGFGFV F E AQ AIN +NG L +R++ S E+++
Sbjct: 128 CKVACDEHG--SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH----FKSRREREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHFHALCVGTI 281
+E TN +YV NL +V L F G +
Sbjct: 182 ELGARALEFTN----------------------IYVKNLPVDVDEQGLQDLFSQF--GKM 217
Query: 282 EDVRVQRD-----KGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
V+V RD + FGFV + H EA A+ N + + G+ + K
Sbjct: 218 LSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 109/256 (42%), Gaps = 24/256 (9%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK+ + S +GFV + +
Sbjct: 91 PGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHGSRGFGFVHFETHEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI T+NG + + + V + +RE G N++V +L +V + L
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDL 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
FS F +VM D +G SR FGFV+F E+AQ A+ +NGK + R + A K
Sbjct: 211 FSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKR 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE N + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQNELKRRFEQMKQDRLR-RYQGVNLYVKNLDDSIDDDKLRKE 313
Query: 273 FHALCVGTIEDVRVQR 288
F V T R QR
Sbjct: 314 FSPYGVITSAKKRRQR 329
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 44/283 (15%)
Query: 49 SVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVT 104
S+YVG++HP VT A+L E FS GP+ + +I + Y +V++ A A+ T
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 105 LNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSD 161
+N I G+P+++ W SQR+ + SG N+F+ +L + + L+ FS F
Sbjct: 72 MNFDVIKGKPVRIMW----SQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILS 127
Query: 162 ARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQS 221
+V+ D+ S+G+GFV F QE A+ AI+ +NG L +R++ S E+++
Sbjct: 128 CKVVCDENG--SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGR----FKSRKEREA 181
Query: 222 SDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRHF----HALC 277
E TN VY+ N ++ L F AL
Sbjct: 182 ELGARAKEFTN----------------------VYIKNFGEDMDDERLKEWFGQYGAALS 219
Query: 278 VGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPI 320
V + D + +GFGFV + H +A A+ N + L GK I
Sbjct: 220 VKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAI 261
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 133/299 (44%), Gaps = 30/299 (10%)
Query: 40 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRS 97
P S ++++ N+ + N L + FS+ G + CK++ + S YGFV + + +
Sbjct: 91 PSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEA 150
Query: 98 AALAIVTLNGRHIFGQPIKVNWAYASSQREDTSG-----HFNVFVGDLSPEVTDATLFAC 152
A AI +NG + + + V + +RE G NV++ + ++ D L
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEW 210
Query: 153 FSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKG 212
F + +VM D G+SRGFGFVSF EDAQ A++D+NGK L + I A K
Sbjct: 211 FGQYGAALSVKVMTDDH-GKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKK 269
Query: 213 ATSGDEKQSSDSKSVVELTNGISDGQEKSNEDAPENNPQYTTVYVGNLSSEVTSVDLHRH 272
VE + E+ +D Q +YV NL + L +
Sbjct: 270 ---------------VERQTELKRKFEQMKQDRITRY-QGVNLYVKNLDDGIDDERLRKE 313
Query: 273 FHALCVGTIEDVRVQ----RDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSK 327
F G+I +V R KGFGFV +S+ EA A+ N RI+ KP+ + +
Sbjct: 314 FTPF--GSITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 370
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 254 TVYVGNLSSEVTSVDLHRHFH----ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQM 309
++YVG+L +VT L+ F L + D+ +R G+ +V + +A A+
Sbjct: 12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 310 GNARILCGKPIKCSWGSK 327
N ++ GKP++ W +
Sbjct: 72 MNFDVIKGKPVRIMWSQR 89
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 160/349 (45%), Gaps = 51/349 (14%)
Query: 50 VYVGNIHPQVTNALLQEVFSSTG-PLEGCKLIKKDKSSYGFVDYFDRRSAALAIVTLNGR 108
+Y+G++ ++ ++++S G P K++ + Y F+ + D +A+ A++ NG
Sbjct: 34 LYMGDLDLSWDERVVSQIWASLGEPNVSVKMMNR----YCFITFLDSLTASNALLK-NGM 88
Query: 109 HI---FGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACF-SVFPTCSDARV 164
I G+ +K+NWA ASS + S +++FVGDLSP VT+A LF F + + + A++
Sbjct: 89 LIPGYGGKRLKLNWAQASS---NASNGYSIFVGDLSPNVTEAQLFDLFINKYASTDHAKI 145
Query: 165 MWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK-----GATSGDEK 219
++DQ TG SRG+GFV F + D Q A+ ++ G +L R I+ +
Sbjct: 146 VYDQATGVSRGYGFVRFNSLMDQQHALLEMQGIFLNGRAIKIGMTGNKQGQLQGQQHQGQ 205
Query: 220 QSSDSKSVVELTNGISDGQ-EKSNEDAPENN----PQYTTVYVGNLSSEVTSVDLHRHFH 274
Q D K ++ ++ Q + P N P TTV+VG LSS VT +L +F
Sbjct: 206 QQQDFKVPIQSNTPMNQSQFMYPVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDELREYFK 265
Query: 275 ALCVGTIEDVRVQRDKGFGFVRYSTHPEAALAIQMGNARILCGKPIKCSWGSKP------ 328
GTI V++ KG GFV+Y A AI + I+ SWG
Sbjct: 266 PF--GTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGFPIANSRIRLSWGRSAKQTALL 323
Query: 329 --------------------TPPGTSSTPLPPPPAPHLPGFSATDLAAY 357
PP ++ P +LPGF D ++Y
Sbjct: 324 QQQLYQQQRQPQLVQQNYSYVPPPMNAKPSNNHNNYYLPGFQTADASSY 372
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 91/213 (42%), Gaps = 52/213 (24%)
Query: 43 DASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS-----YGFVDY---FD 94
+AS S++VG++ P VT A L ++F + I D+++ YGFV + D
Sbjct: 108 NASNGYSIFVGDLSPNVTEAQLFDLFINKYASTDHAKIVYDQATGVSRGYGFVRFNSLMD 167
Query: 95 RRSAALAI--VTLNGRHI------------------------FGQPIKVNWAYASS---- 124
++ A L + + LNGR I F PI+ N S
Sbjct: 168 QQHALLEMQGIFLNGRAIKIGMTGNKQGQLQGQQHQGQQQQDFKVPIQSNTPMNQSQFMY 227
Query: 125 --QREDTSGHF------NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGF 176
Q++ T HF VFVG LS VT+ L F F T ++ +G
Sbjct: 228 PVQQQPTLNHFTDPNNTTVFVGGLSSLVTEDELREYFKPFGTIVYVKI------PVGKGC 281
Query: 177 GFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWA 209
GFV + ++ A++AI+ + G + N +IR +W
Sbjct: 282 GFVQYIDRVSAENAISKMQGFPIANSRIRLSWG 314
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.131 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,615,049,615
Number of Sequences: 23463169
Number of extensions: 284873357
Number of successful extensions: 1526145
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14060
Number of HSP's successfully gapped in prelim test: 7693
Number of HSP's that attempted gapping in prelim test: 1430747
Number of HSP's gapped (non-prelim): 73080
length of query: 412
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 267
effective length of database: 8,957,035,862
effective search space: 2391528575154
effective search space used: 2391528575154
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)