BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015152
(412 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M2D2|YU88_ARATH UPF0187 protein At3g61320, chloroplastic OS=Arabidopsis thaliana
GN=At3g61320 PE=2 SV=2
Length = 410
Score = 526 bits (1354), Expect = e-148, Method: Compositional matrix adjust.
Identities = 276/397 (69%), Positives = 325/397 (81%), Gaps = 3/397 (0%)
Query: 14 SHFIPKTLLKLQPSITTLTFPSKSPNPLTFKTLSCLESQ-SQSETKTLTLISVLRAIPDW 72
S+F ++LL+ + I + F KS N + S ES S ET T LI +LRA+PDW
Sbjct: 11 SNFTHRSLLESRFPIFSTGF-RKSVNLKPPRVSSGPESNDSGHETLTDKLIHLLRAVPDW 69
Query: 73 ADRVKERGVKQKRTLYSHEKWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVI 132
AD +KERG++QKR+LY+HEKWVEHRSSLRHVRHLLSS SSRVILSLIPPV FT VAVVI
Sbjct: 70 ADEIKERGMQQKRSLYTHEKWVEHRSSLRHVRHLLSSFSSRVILSLIPPVFFFTSVAVVI 129
Query: 133 ASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIA 192
ASYNSA+ LPG P+LR+SSLPYQLTAPALALLLVFRTEASYSR+ +G+KAW IIA
Sbjct: 130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189
Query: 193 GTNDFATMVISGTDNSTDE-CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDL 251
GTND A VI D+S DE IKD LLRYI AFPVALK HVI SD++ DL++L++ADDL
Sbjct: 190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249
Query: 252 AIVLDSKHRPRCIIEFISQSLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSY 311
+++L +KHRPRC+IEFISQS+QLL L+ K+++LESK+ HEGIGVCEQLMGIPIPLSY
Sbjct: 250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSY 309
Query: 312 TRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 371
TRLTSRFLV WHLTLPIILWD+CHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL
Sbjct: 310 TRLTSRFLVFWHLTLPIILWDECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDEL 369
Query: 372 CNLVQSNIQEAIATQKVIQAQVSAKRKSHSYQHCANG 408
C+LV SNIQEA+ ++KVI+ ++ AK K H ++H +NG
Sbjct: 370 CDLVHSNIQEAVKSEKVIRNRIIAKIKLHEFKHSSNG 406
>sp|O80832|YU87_ARATH UPF0187 protein At2g45870, chloroplastic OS=Arabidopsis thaliana
GN=At2g45870 PE=2 SV=1
Length = 410
Score = 498 bits (1281), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/382 (66%), Positives = 313/382 (81%), Gaps = 4/382 (1%)
Query: 35 SKSPNPLTFK-TLSCLESQSQSETKTLT--LISVLRAIPDWADRVKERGVKQKRTLYSHE 91
+++P L FK SC+ S +S+ L+ LIS+L+A+P+W+D +KER ++QKR+LY+HE
Sbjct: 29 ARAPKSLHFKFNPSCVSSGPKSDDSPLSEKLISLLKAVPNWSDGIKERRMQQKRSLYTHE 88
Query: 92 KWVEHRSSLRHVRHLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVL 151
WV HRSSLRH+RH+ SS SSRVILSLIPPV FT VA++IA YNSA+D LP F PVL
Sbjct: 89 NWVRHRSSLRHLRHVSSSPSSRVILSLIPPVFFFTTVAILIAGYNSAVDLDWLPDFFPVL 148
Query: 152 RASSLPYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDE 211
RAS LPYQLTAPALALLLVFRTEASYSRF G+KAW +II+GTND A +VIS S DE
Sbjct: 149 RASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHGSGDE 208
Query: 212 -CIKDSLLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQ 270
I+D+LLRYI+AFPVALK HVI SD++ DL+++++ DDL+++L SKHRPRC+I+FISQ
Sbjct: 209 LIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQFISQ 268
Query: 271 SLQLLNLEATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIIL 330
SLQLLNL++TK +MLE+K+ EGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLP+IL
Sbjct: 269 SLQLLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPVIL 328
Query: 331 WDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCNLVQSNIQEAIATQKVIQ 390
WDDCHW VVPATFISAASLFCIEEVGVLIEEPF MLALDELC +V SN EA+ +++VI+
Sbjct: 329 WDDCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLALDELCAMVLSNSDEAVESKEVIR 388
Query: 391 AQVSAKRKSHSYQHCANGWPNS 412
++ AK++ +H +NGW S
Sbjct: 389 NRIIAKKRILEIKHSSNGWHKS 410
>sp|P72926|Y1024_SYNY3 UPF0187 protein sll1024 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll1024 PE=3 SV=2
Length = 307
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 11/229 (4%)
Query: 165 LALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSL--LRYIM 222
L LLLVFRT +Y RF +G+KAW ++ + + ++ + + +D + L ++
Sbjct: 68 LGLLLVFRTNTAYERFWEGRKAWGTMVNTIRNLSRIIWVSVAEPSPQAHQDKIKILHLLV 127
Query: 223 AFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLL----NLE 278
AF VA K H + ++ ++ LL + D + P I +IS LQ N+
Sbjct: 128 AFAVATKLH-LRSQPLNEEIWALLPESGYRKLEDLNNPPLEIAFWISNYLQREYDQNNIN 186
Query: 279 ATKQNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIV 338
A + + + + +G CE+++ PIPL+Y + + L+ P + + HW
Sbjct: 187 AYQLTAMLRLVDTMVDVLGSCERILKTPIPLAYAIHLRQLIFLYCFITPFQIVNTLHWAT 246
Query: 339 VPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAI 383
I A ++F IEE+GV IE PF L LD++C +Q+N+++ I
Sbjct: 247 AFVVGIIAFTVFGIEEIGVEIENPFGHDANDLPLDQICQTMQANLEDLI 295
>sp|Q8YSU5|Y2987_NOSS1 UPF0187 protein alr2987 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=alr2987 PE=3 SV=1
Length = 307
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 31/283 (10%)
Query: 123 IAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPA-------------LALLL 169
IAF + VI + + L G L +L YQL P L LLL
Sbjct: 11 IAFQLRGSVIGAIYKRVICCALFGVL-----VTLLYQLKIPVSQPILGSVIPSIVLGLLL 65
Query: 170 VFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNST--DECIKDSLLRYIMAFPVA 227
VFRT +Y RF +G+KAW I+ T + A + + + D K S+L ++AF VA
Sbjct: 66 VFRTNTAYDRFWEGRKAWGSIVNNTRNLARQIWVSVEEVSLKDREAKISVLNLLVAFAVA 125
Query: 228 LKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRC-----IIEFISQSLQLLNLEATKQ 282
K H+ + ++ +L+DL+ L S + P I +++ Q L + +
Sbjct: 126 TKLHLRGEP-INSELEDLISTSRY-FKLKSMNNPPLEVAFWIGDYLQQQYTCKCLNSYQL 183
Query: 283 NMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPAT 342
++ ++ + +G CE+++ P+PL+Y+ + L+L+ LP + + W
Sbjct: 184 TSIQELLNNLVDNLGSCERILRTPMPLAYSIHLKQLLLLYCFLLPFQMVESLGWWTGLVV 243
Query: 343 FISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQE 381
+ + +LF IE +G+ IE PF L LD +CN ++ NI +
Sbjct: 244 GLVSFTLFGIEAIGLEIENPFGYDPNDLPLDAICNTMKRNIDD 286
>sp|Q8XTY1|Y3414_RALSO UPF0187 protein RSc3414 OS=Ralstonia solanacearum (strain GMI1000)
GN=RSc3414 PE=3 SV=1
Length = 306
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 121/276 (43%), Gaps = 12/276 (4%)
Query: 117 SLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPALALLLVFRTEAS 176
S++P ++ + I+ A+ H LP + S+ P+ L ALA+ L FR AS
Sbjct: 19 SVLPQLLPRLFLIFCISLVAMAVHVHWLP---ITVNLSTTPFSLIGIALAVFLGFRNNAS 75
Query: 177 YSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFPVALKGHVICDS 236
Y R+ + +K W Q++ ++ + ++ + A P AL+ H + +
Sbjct: 76 YDRYWEARKLWGQLLNDARSMTRQALTLPRETLAAADVREFVQVLGALPHALR-HQLRRT 134
Query: 237 DVSGDLQDLLDADDLAIVLDSKHRPRCII----EFISQSLQLLNLEATKQNMLESKISCF 292
D DL L A V+ S++RP ++ E++ Q + +L+A + +
Sbjct: 135 DPRDDLSARLPAPLFERVMASRYRPAALMLWLGEWVRQRSREGSLDAWAVLAFDRNLGSL 194
Query: 293 HEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCI 352
IG CE+++ P+P +Y+ + R + + LP L + + A +
Sbjct: 195 SNVIGGCERIVSTPLPFAYSVMIHRTVYFFCAALPFGLVESIGNFTPVFSVFVAYAFMAH 254
Query: 353 EEVGVLIEEPFPM----LALDELCNLVQSNIQEAIA 384
E + IEEPF LAL+ + +++ +++ I
Sbjct: 255 EAIAAQIEEPFGTEDNDLALNTMSLMIEDAVRDLIG 290
>sp|Q8XAZ3|YNEE_ECO57 UPF0187 protein YneE OS=Escherichia coli O157:H7 GN=yneE PE=3 SV=2
Length = 304
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 44/305 (14%)
Query: 106 LLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPAL 165
+LS +SSR++L+ + F++ + + + + L ++ + P+ + A+
Sbjct: 20 VLSKISSRLLLNFL-----FSIAVIFMLPWYTHLG----------IKFTLAPFSILGVAI 64
Query: 166 ALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFP 225
A+ L FR A Y+R+V+ +K W Q++ + V + +S R +AF
Sbjct: 65 AIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSAS---VREFARLQIAFA 121
Query: 226 VALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNM- 284
L+ + V L L +DL VL S I+ + + L + ++
Sbjct: 122 HCLRMTLRKQPQVEV-LAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDIL 180
Query: 285 ---LESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW----- 336
L +++ + CE++ PIP +YT + R + L+ + LP L D H+
Sbjct: 181 FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI 240
Query: 337 -IVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKVIQA 391
+++ TFI SL C+ E +E+PF L LD +CN ++ ++ Q +A
Sbjct: 241 SVLISYTFI---SLDCLAEE---LEDPFGTENNDLPLDAICNAIEIDL-----LQMNDEA 289
Query: 392 QVSAK 396
++ AK
Sbjct: 290 EIPAK 294
>sp|Q98E66|Y4386_RHILO UPF0187 protein mll4386 OS=Rhizobium loti (strain MAFF303099)
GN=mll4386 PE=3 SV=1
Length = 309
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 18/287 (6%)
Query: 105 HLLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPA 164
L + V+ ++P + F + + VI + + L G + P+ L
Sbjct: 19 QLFFIMRGSVVPRILPQIFGFAVYSAVILALARWFELDL--GVFNIT-----PFGLVGVT 71
Query: 165 LALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAF 224
L++ L FR A+Y R+ + +K W ++ + A + T D + +LL +AF
Sbjct: 72 LSIYLSFRNNAAYDRWWEARKLWGTLVFEIRNLAR---ATTSLIPDPAEQRALLMEALAF 128
Query: 225 PVALKGHVICDSDVSGDLQDLLDADD---LAIVLDSKHRPRCIIEFISQSLQLLNLEATK 281
L+G + +D D + +DA + R + + + +++
Sbjct: 129 CHFLRGQ-LRKTDSIKDARAFIDAQAETVAGFANPADEMVRRMGRRANAQRRAGDVDPIG 187
Query: 282 QNMLESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPA 341
+L+ +++ CE++ G P+P +YT L R + L LPI L W
Sbjct: 188 FRILDERLASITAIQAGCERIAGTPLPFAYTLLVHRTAYIVCLLLPIGLISTTGWATPLF 247
Query: 342 TFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIA 384
T + A + F ++ + +E+PF LALD LC + + ++ EA+
Sbjct: 248 TALIAYTFFGLDALSEELEDPFGTEANDLALDGLCRVCEISVFEALG 294
>sp|P76146|YNEE_ECOLI UPF0187 protein YneE OS=Escherichia coli (strain K12) GN=yneE PE=3
SV=2
Length = 304
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 135/305 (44%), Gaps = 44/305 (14%)
Query: 106 LLSSLSSRVILSLIPPVIAFTMVAVVIASYNSALDSHLLPGFLPVLRASSLPYQLTAPAL 165
+LS +SSR++L+ + F++ + + + + L ++ + P+ + A+
Sbjct: 20 VLSKISSRLLLNFL-----FSIAVIFMLPWYTHLG----------IKFTLAPFSILGVAI 64
Query: 166 ALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDSLLRYIMAFP 225
A+ L FR A Y+R+V+ +K W Q++ + V + +S R +AF
Sbjct: 65 AIFLGFRNNAGYARYVEARKLWGQLMIASRSLLREVKTTLPDSAS---VREFARLQIAFA 121
Query: 226 VALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLNLEATKQNM- 284
L+ + + L L +DL VL S I+ + + L + ++
Sbjct: 122 HCLR-MTLRKQPQAEVLAHYLKTEDLQRVLASNSPANRILLIMGEWLAVQRRNGQLSDIL 180
Query: 285 ---LESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHW----- 336
L +++ + CE++ PIP +YT + R + L+ + LP L D H+
Sbjct: 181 FISLNDRLNDISAVLAGCERIAYTPIPFAYTLILHRTVYLFCIMLPFALVVDLHYMTPFI 240
Query: 337 -IVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKVIQA 391
+++ TFI SL C+ E +E+PF L LD +CN ++ ++ Q +A
Sbjct: 241 SVLISYTFI---SLDCLAEE---LEDPFGTENNDLPLDAICNAIEIDL-----LQMNDEA 289
Query: 392 QVSAK 396
++ AK
Sbjct: 290 EIPAK 294
>sp|Q8ZPI0|YNEE_SALTY UPF0187 protein YneE OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=yneE PE=3 SV=2
Length = 304
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 157 PYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDS 216
P+ + A+A+ L FR A Y+R+V+ + W Q++ + V DE +
Sbjct: 56 PFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREV---KTTLPDERGIED 112
Query: 217 LLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLN 276
+R +AF L+ + + L + LD + L V+ S I+ + + L +
Sbjct: 113 FVRLQIAFAHCLR-MTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAIRR 171
Query: 277 LEATKQNML----ESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWD 332
++L ++++ + CE++ P+P +YT + R + L+ + LP L
Sbjct: 172 RSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALVV 231
Query: 333 DCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKV 388
D H++ + + + + ++ + +E+PF L LD +CN ++ ++ + + +
Sbjct: 232 DLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDI 291
Query: 389 IQAQVSAKR 397
++ KR
Sbjct: 292 PAKRIPDKR 300
>sp|Q8Z706|YNEE_SALTI UPF0187 protein YneE OS=Salmonella typhi GN=yneE PE=3 SV=2
Length = 304
Score = 62.0 bits (149), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 111/249 (44%), Gaps = 12/249 (4%)
Query: 157 PYQLTAPALALLLVFRTEASYSRFVDGKKAWTQIIAGTNDFATMVISGTDNSTDECIKDS 216
P+ + A+A+ L FR A Y+R+V+ + W Q++ + V DE +
Sbjct: 56 PFSILGVAIAIFLGFRNNACYARYVEARHLWGQLMIASRSILREV---KTTLPDERGIED 112
Query: 217 LLRYIMAFPVALKGHVICDSDVSGDLQDLLDADDLAIVLDSKHRPRCIIEFISQSLQLLN 276
+R +AF L+ + + L + LD + L V+ S I+ + + L +
Sbjct: 113 FVRLQIAFAHCLR-MTLRRQPQTQVLGNYLDQEALQKVVASHSPANRILLLMGEWLAIRR 171
Query: 277 LEATKQNML----ESKISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWD 332
++L ++++ + CE++ P+P +YT + R + L+ + LP L
Sbjct: 172 RSGKLSDILFHSLNNRLNDMSSVLAGCERIANTPVPFAYTLILHRTVYLFCIMLPFALVV 231
Query: 333 DCHWIVVPATFISAASLFCIEEVGVLIEEPFPM----LALDELCNLVQSNIQEAIATQKV 388
D H++ + + + + ++ + +E+PF L LD +CN ++ ++ + + +
Sbjct: 232 DLHYMTPFISVLISYTFIALDALAEELEDPFGTENNDLPLDAICNAIEIDLLQMNDERDI 291
Query: 389 IQAQVSAKR 397
++ KR
Sbjct: 292 PAKRIPDKR 300
>sp|O45876|APH1_CAEEL Gamma-secretase subunit aph-1 OS=Caenorhabditis elegans GN=aph-1
PE=1 SV=1
Length = 308
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 304 GIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIV-VPATFISAAS 348
G +PL YT L++ L L+H+T I++WD CH I +P+ F+ A+
Sbjct: 165 GKYLPLCYT-LSAILLTLFHVTWTIMVWDSCHKIGRIPSAFVPGAA 209
>sp|P28972|TG21_EHV1B Tegument protein UL21 homolog OS=Equine herpesvirus 1 (strain Ab4p)
GN=40 PE=3 SV=1
Length = 530
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 308 PLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLA 367
PL T + S F+ + + P +WD + A+ S LF I + +LIEEP+P
Sbjct: 239 PLRKT-VVSDFVQVRLIPKPCSIWDSASRVASGASLQSLQLLFKIADEIILIEEPWP--G 295
Query: 368 LDELCNLVQSNIQEAI 383
LDE N +S I +AI
Sbjct: 296 LDEHLNQARSTIVDAI 311
>sp|Q6S6T1|TG21_EHV1V Tegument protein UL21 homolog OS=Equine herpesvirus 1 (strain V592)
GN=40 PE=3 SV=1
Length = 530
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 308 PLSYTRLTSRFLVLWHLTLPIILWDDCHWIVVPATFISAASLFCIEEVGVLIEEPFPMLA 367
PL T + S F+ + + P +WD + A+ S LF I + +LIEEP+P
Sbjct: 239 PLRKT-VVSDFVQVRLIPKPCSIWDSASRVASGASLQSLQLLFKIADEIILIEEPWP--G 295
Query: 368 LDELCNLVQSNIQEAI 383
LDE N +S I +AI
Sbjct: 296 LDEHLNQARSTIVDAI 311
>sp|Q6DGU5|S2546_DANRE Solute carrier family 25 member 46 OS=Danio rerio GN=slc25a46 PE=2
SV=1
Length = 405
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Query: 289 ISCFHEGIGVCEQLMGIPIPLSYTRLTSRFLVLWHLTLPIILWDDCHWIV 338
+ C EG+G ++MG+ IP S R L LW+L LP +L H+I+
Sbjct: 221 LDCVKEGLG---RVMGMGIPHS-----KRLLPLWNLVLPTVLHGILHYII 262
>sp|P30267|Y2044_BACPE Uncharacterized protein BpOF4_10220 OS=Bacillus pseudofirmus
(strain OF4) GN=BpOF4_10220 PE=4 SV=1
Length = 463
Score = 32.3 bits (72), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 88 YSHEKWVEHRSSLRHVRHLLSSLSSRVI---LSLIPPVIAFTMVAVVIASYNSALDSHLL 144
++ E+ V S ++ V+ + + V+ LIP V+A +A+++A Y S
Sbjct: 303 WALERAVATASKVKSVKGVATKGFQNVLDIWFGLIPLVMALGTIALIVAEYTSIFTYLSY 362
Query: 145 PGFLPVLRASSLPYQLTAPALALLLVF-----------RTEASYSRFVDGKKAWTQII 191
P F+P+L +P + A A ALL+ F E+ +RFV + TQ+I
Sbjct: 363 P-FVPILELLRIP-EAQAAAPALLVGFADMFLPAVVGSGIESELTRFVIAAVSMTQLI 418
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,909,182
Number of Sequences: 539616
Number of extensions: 5405080
Number of successful extensions: 13604
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 13582
Number of HSP's gapped (non-prelim): 18
length of query: 412
length of database: 191,569,459
effective HSP length: 120
effective length of query: 292
effective length of database: 126,815,539
effective search space: 37030137388
effective search space used: 37030137388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)