Query 015154
Match_columns 412
No_of_seqs 143 out of 813
Neff 3.5
Searched_HMMs 29240
Date Mon Mar 25 07:38:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015154.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015154hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nme_A Ptpkis1 protein, SEX4 g 99.9 1.3E-23 4.4E-28 200.7 9.2 119 283-412 123-253 (294)
2 1z0n_A 5'-AMP-activated protei 99.9 1.9E-22 6.6E-27 165.6 9.3 81 318-412 8-89 (96)
3 2qlv_B Protein SIP2, protein S 99.9 3.3E-22 1.1E-26 189.9 10.6 84 319-412 2-86 (252)
4 4aee_A Alpha amylase, catalyti 99.5 3.4E-14 1.2E-18 148.5 8.2 78 319-409 16-102 (696)
5 4aef_A Neopullulanase (alpha-a 99.2 3.2E-11 1.1E-15 124.5 8.3 68 320-400 16-84 (645)
6 3c8d_A Enterochelin esterase; 98.2 3E-06 1E-10 82.7 8.8 81 318-411 28-149 (403)
7 2z0b_A GDE5, KIAA1434, putativ 98.2 8.6E-06 2.9E-10 70.1 9.5 71 319-397 7-102 (131)
8 1ac0_A Glucoamylase; hydrolase 97.8 1E-05 3.4E-10 66.7 4.0 75 319-401 5-93 (108)
9 1m7x_A 1,4-alpha-glucan branch 97.4 0.00035 1.2E-08 72.4 9.4 68 321-400 25-100 (617)
10 3k1d_A 1,4-alpha-glucan-branch 97.2 0.00046 1.6E-08 73.9 7.7 69 320-400 135-211 (722)
11 3aml_A OS06G0726400 protein; s 97.1 0.00065 2.2E-08 72.9 7.0 64 322-398 66-143 (755)
12 1qho_A Alpha-amylase; glycosid 96.1 0.017 5.7E-07 60.5 9.1 71 319-401 580-673 (686)
13 1cyg_A Cyclodextrin glucanotra 96.0 0.026 8.7E-07 59.1 9.9 74 319-401 578-667 (680)
14 2laa_A Beta/alpha-amylase; SBD 95.9 0.015 5.2E-07 49.0 6.7 65 321-398 5-77 (104)
15 2vn4_A Glucoamylase; hydrolase 95.7 0.024 8.3E-07 59.5 8.6 73 321-401 497-583 (599)
16 1bf2_A Isoamylase; hydrolase, 95.7 0.011 3.7E-07 63.1 5.9 56 322-390 17-85 (750)
17 3vgf_A Malto-oligosyltrehalose 95.5 0.0071 2.4E-07 62.0 3.7 61 322-398 10-73 (558)
18 2wsk_A Glycogen debranching en 95.3 0.019 6.6E-07 60.1 6.2 54 322-389 20-77 (657)
19 3bmv_A Cyclomaltodextrin gluca 95.3 0.037 1.3E-06 57.9 8.2 74 319-401 582-670 (683)
20 1vem_A Beta-amylase; beta-alph 95.1 0.046 1.6E-06 56.5 8.1 72 319-401 418-506 (516)
21 2bhu_A Maltooligosyltrehalose 95.1 0.016 5.4E-07 60.2 4.6 62 322-400 35-97 (602)
22 1d3c_A Cyclodextrin glycosyltr 95.0 0.05 1.7E-06 56.9 8.2 74 319-401 585-673 (686)
23 2vr5_A Glycogen operon protein 94.9 0.037 1.3E-06 58.7 6.9 55 322-390 30-91 (718)
24 1wzl_A Alpha-amylase II; pullu 94.0 0.067 2.3E-06 54.8 6.1 60 320-387 22-87 (585)
25 2e8y_A AMYX protein, pullulana 93.3 0.16 5.3E-06 53.8 7.6 66 322-400 114-186 (718)
26 2fhf_A Pullulanase; multiple d 92.7 0.1 3.5E-06 58.5 5.5 67 322-400 305-385 (1083)
27 1j0h_A Neopullulanase; beta-al 92.5 0.092 3.1E-06 53.9 4.5 61 319-387 21-89 (588)
28 1gcy_A Glucan 1,4-alpha-maltot 91.5 0.035 1.2E-06 56.2 0.0 70 320-400 430-517 (527)
29 2wan_A Pullulanase; hydrolase, 91.4 0.22 7.6E-06 54.5 6.2 63 322-398 326-398 (921)
30 3m07_A Putative alpha amylase; 91.1 0.32 1.1E-05 50.9 6.7 62 322-400 43-107 (618)
31 3faw_A Reticulocyte binding pr 90.8 0.12 4.2E-06 56.6 3.4 65 323-399 146-224 (877)
32 4aio_A Limit dextrinase; hydro 90.7 0.18 6.3E-06 52.8 4.5 54 322-388 137-194 (884)
33 2ya0_A Putative alkaline amylo 90.5 0.26 8.9E-06 52.1 5.5 65 322-398 25-105 (714)
34 2wan_A Pullulanase; hydrolase, 87.2 0.64 2.2E-05 50.9 5.8 51 329-391 161-221 (921)
35 1ea9_C Cyclomaltodextrinase; h 86.0 0.18 6.2E-06 51.7 0.7 60 320-387 22-86 (583)
36 1ji1_A Alpha-amylase I; beta/a 85.2 0.41 1.4E-05 49.6 2.8 60 321-388 30-96 (637)
37 4fch_A Outer membrane protein 81.8 0.9 3.1E-05 41.3 3.3 51 330-391 11-63 (221)
38 2c3v_A Alpha-amylase G-6; carb 80.7 2.9 9.9E-05 35.0 5.8 65 321-397 10-81 (102)
39 2ya1_A Putative alkaline amylo 78.0 3.1 0.00011 46.2 6.7 63 323-397 333-411 (1014)
40 4ham_A LMO2241 protein; struct 58.8 8.1 0.00028 32.1 3.7 30 62-91 17-47 (134)
41 2eef_A Protein phosphatase 1, 58.6 13 0.00043 33.2 5.1 71 322-397 49-132 (156)
42 3tqn_A Transcriptional regulat 57.6 9 0.00031 31.1 3.7 34 62-95 12-46 (113)
43 4fe9_A Outer membrane protein 53.2 12 0.0004 37.2 4.4 46 331-387 150-197 (470)
44 3neu_A LIN1836 protein; struct 49.6 16 0.00053 30.2 4.0 48 62-114 16-64 (125)
45 4dny_A Metalloprotease STCE; m 45.7 41 0.0014 29.4 6.1 25 371-396 98-123 (126)
46 4fe9_A Outer membrane protein 44.2 18 0.0006 35.9 4.1 53 331-394 260-319 (470)
47 3ic7_A Putative transcriptiona 37.7 13 0.00043 30.9 1.6 31 62-92 14-45 (126)
48 2ek5_A Predicted transcription 34.2 35 0.0012 28.4 3.9 31 62-92 7-38 (129)
49 2djm_A Glucoamylase A; beta sa 31.8 60 0.0021 27.1 4.8 68 322-393 22-97 (106)
50 2d3d_A VTS1 protein; RNA bindi 31.5 37 0.0013 27.8 3.4 54 59-113 12-76 (88)
51 4fem_A Outer membrane protein 30.8 31 0.001 33.1 3.3 51 331-392 149-201 (358)
52 3tnu_B Keratin, type II cytosk 30.4 87 0.003 26.3 5.7 64 253-316 34-97 (129)
53 3edp_A LIN2111 protein; APC883 29.1 42 0.0014 30.4 3.7 31 62-92 12-43 (236)
54 2eap_A Lymphocyte cytosolic pr 29.0 30 0.001 28.7 2.5 37 75-112 6-42 (90)
55 1mhx_A Immunoglobulin-binding 28.0 16 0.00054 28.4 0.6 14 386-399 48-61 (65)
56 3qh9_A Liprin-beta-2; coiled-c 27.7 1.2E+02 0.004 24.8 5.7 39 255-293 26-64 (81)
57 4fch_A Outer membrane protein 27.7 34 0.0012 30.8 2.9 49 332-390 117-169 (221)
58 2wv0_A YVOA, HTH-type transcri 27.5 48 0.0016 30.1 3.8 34 61-94 12-46 (243)
59 1v4r_A Transcriptional repress 27.4 45 0.0015 26.0 3.2 32 61-92 13-45 (102)
60 3bwg_A Uncharacterized HTH-typ 26.9 43 0.0015 30.3 3.4 33 62-94 8-41 (239)
61 3by6_A Predicted transcription 26.5 53 0.0018 27.1 3.6 32 61-92 13-45 (126)
62 3tnu_A Keratin, type I cytoske 26.0 89 0.003 26.4 5.0 63 254-316 37-99 (131)
63 3mxz_A Tubulin-specific chaper 24.3 74 0.0025 27.1 4.1 65 254-318 32-105 (116)
64 1igd_A Protein G; immunoglobul 24.0 21 0.00073 27.7 0.6 13 386-398 44-56 (61)
65 3fil_A Immunoglobulin G-bindin 22.9 16 0.00053 27.9 -0.3 13 386-398 39-51 (56)
66 4egu_A Histidine triad (HIT) p 22.5 49 0.0017 26.6 2.6 34 77-111 44-77 (119)
67 2di3_A Bacterial regulatory pr 21.0 77 0.0026 28.1 3.8 30 62-91 7-37 (239)
68 3eet_A Putative GNTR-family tr 20.7 76 0.0026 29.5 3.8 32 61-92 31-63 (272)
69 1x2l_A CUT-like 2, homeobox pr 20.5 1.4E+02 0.0049 24.9 5.0 54 49-116 7-60 (101)
No 1
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.89 E-value=1.3e-23 Score=200.70 Aligned_cols=119 Identities=24% Similarity=0.373 Sum_probs=100.1
Q ss_pred HHHHHHHHHhhhhccccccccccchH------HHHHHHhh-C--CCceEEEEEEec-CCceEEEEeeeCCCccccccCCC
Q 015154 283 LALSVLQTKAVTEINKAEKLISDKDE------ELIAAEES-L--SGLEVVEIQYSG-DGEIVEVAGSFNGWHHRIKMDPL 352 (412)
Q Consensus 283 ~aLa~l~~k~~~~i~~Aq~ll~eK~~------~LdaAe~a-L--sgL~~VTFtW~g-~AkeV~LaGSFNNW~~~IpM~kd 352 (412)
.++|||-.+.++.+.+|-..+.++++ .+..|... + -..++|+|+|.+ +|++|+|+||||||...++|.++
T Consensus 123 vv~ayLm~~~g~s~~~A~~~v~~~Rp~~Pn~~~l~~~~~~~L~~~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~ 202 (294)
T 3nme_A 123 VALTYMFWVQGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLG 202 (294)
T ss_dssp HHHHHHHHTSCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHhCCCCCChhhhhHHHHHhhhccccccceeeeccCCCCEEEEEEeccCCCCcccceEc
Confidence 67899999989999999888877665 22222222 3 334899999999 59999999999999988999986
Q ss_pred CCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCCCCCcc-cC-CCccceEEEeC
Q 015154 353 PSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESV-TK-GGICNNILRVI 412 (412)
Q Consensus 353 ~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DPd~PtV-tD-~G~vNNVL~V~ 412 (412)
...|.|++++.||||+|+|||+|||+|++||++|.+ .+ .|+.||+|.|.
T Consensus 203 -----------~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~nn~~~v~ 253 (294)
T 3nme_A 203 -----------KGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHTNNYAKVV 253 (294)
T ss_dssp -----------TTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCCEEEEEEC
T ss_pred -----------CCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCEeEEEEEC
Confidence 247999999999999999999999999999999987 45 69999999984
No 2
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.87 E-value=1.9e-22 Score=165.61 Aligned_cols=81 Identities=35% Similarity=0.593 Sum_probs=73.5
Q ss_pred CCceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCCCCC
Q 015154 318 SGLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRE 397 (412)
Q Consensus 318 sgL~~VTFtW~g~AkeV~LaGSFNNW~~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DPd~P 397 (412)
...++|+|+|..+|++|+|+|+||+|+ .++|.++ .|.|++++.|+||.|+|||+|||+|++||..|
T Consensus 8 ~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~-------------~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~ 73 (96)
T 1z0n_A 8 AQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRS-------------QNNFVAILDLPEGEHQYKFFVDGQWTHDPSEP 73 (96)
T ss_dssp --CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEE-------------TTEEEEEEEECSEEEEEEEEETTEEECCTTSC
T ss_pred CCceEEEEEECCCCcEEEEEEEeCCCc-cccCEEC-------------CCEEEEEEEccCCCEEEEEEECCeEEcCCCCC
Confidence 456899999998899999999999999 7899862 48999999999999999999999999999999
Q ss_pred cccC-CCccceEEEeC
Q 015154 398 SVTK-GGICNNILRVI 412 (412)
Q Consensus 398 tVtD-~G~vNNVL~V~ 412 (412)
++.+ .|+.||+|.|.
T Consensus 74 ~~~d~~G~~Nnvi~V~ 89 (96)
T 1z0n_A 74 IVTSQLGTVNNIIQVK 89 (96)
T ss_dssp EEECTTSCEEEEEEEC
T ss_pred eEECCCCCEeEEEEEc
Confidence 9887 69999999984
No 3
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=99.87 E-value=3.3e-22 Score=189.87 Aligned_cols=84 Identities=31% Similarity=0.438 Sum_probs=77.1
Q ss_pred CceEEEEEEecCCceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCCCCCc
Q 015154 319 GLEVVEIQYSGDGEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 398 (412)
Q Consensus 319 gL~~VTFtW~g~AkeV~LaGSFNNW~~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DPd~Pt 398 (412)
.+++|+|+|.++|++|+|+|+|++|.+.++|.+.. .++|.|++++.|+||+|+|||+|||+|++||++|+
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~----------~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~ 71 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDS----------DNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPT 71 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECS----------SSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceecc----------CCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCE
Confidence 56899999999999999999999999888998731 35789999999999999999999999999999999
Q ss_pred ccC-CCccceEEEeC
Q 015154 399 VTK-GGICNNILRVI 412 (412)
Q Consensus 399 VtD-~G~vNNVL~V~ 412 (412)
+.+ .|+.||+|.|.
T Consensus 72 ~~d~~G~~nNvi~V~ 86 (252)
T 2qlv_B 72 ATDQMGNFVNYIEVR 86 (252)
T ss_dssp EBCSSCCCEEEEEEC
T ss_pred EecCCCcCcceeecc
Confidence 887 69999999984
No 4
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.48 E-value=3.4e-14 Score=148.49 Aligned_cols=78 Identities=19% Similarity=0.224 Sum_probs=67.0
Q ss_pred CceEEEEEEec--CCceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeee--cC
Q 015154 319 GLEVVEIQYSG--DGEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK--VD 393 (412)
Q Consensus 319 gL~~VTFtW~g--~AkeV~LaGSFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~--~D 393 (412)
+..+|+|++.. +|++|+|+||||+|++ ..+|.+ .+|.|++++.||||+|+|||+|||+|. +|
T Consensus 16 ~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~-------------~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d 82 (696)
T 4aee_A 16 GRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRK-------------IEEQGIVYLKLWPGEYGYGFQIDNDFENVLD 82 (696)
T ss_dssp EEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEE-------------ETTEEEEEEEECSEEEEEEEEETTCCSCCCC
T ss_pred CcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEe-------------cCCeEEEEEEcCCceEEEEEEECCEEeecCC
Confidence 56789999877 5999999999999975 367875 489999999999999999999999999 88
Q ss_pred CCCCccc---C-CCccceEE
Q 015154 394 PQRESVT---K-GGICNNIL 409 (412)
Q Consensus 394 Pd~PtVt---D-~G~vNNVL 409 (412)
|++|... + .|..|+|.
T Consensus 83 ~~~~~~~y~~~~~g~~n~~~ 102 (696)
T 4aee_A 83 PDNEEKKCVHTSFFPEYKKC 102 (696)
T ss_dssp TTCCCEEEEECSSCTTSEEE
T ss_pred CCCCcccccccCCcccccee
Confidence 9988744 3 48899885
No 5
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.17 E-value=3.2e-11 Score=124.54 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=59.9
Q ss_pred ceEEEEEEecCCceEEEEeeeCCCccc-cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCCCCCc
Q 015154 320 LEVVEIQYSGDGEIVEVAGSFNGWHHR-IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRES 398 (412)
Q Consensus 320 L~~VTFtW~g~AkeV~LaGSFNNW~~~-IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DPd~Pt 398 (412)
+..|.|.++..|+.|+|.|+||+|.+. .+|++ .+|.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~-------------~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQ-------------EGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEE-------------CSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceE-------------cCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 357888899989999999999999863 56765 4689999999999999999999999999999986
Q ss_pred cc
Q 015154 399 VT 400 (412)
Q Consensus 399 Vt 400 (412)
..
T Consensus 83 ~~ 84 (645)
T 4aef_A 83 RR 84 (645)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 6
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.21 E-value=3e-06 Score=82.71 Aligned_cols=81 Identities=21% Similarity=0.206 Sum_probs=64.6
Q ss_pred CCceEEEEEEecC-C-------ceEEEEeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeeE-EE
Q 015154 318 SGLEVVEIQYSGD-G-------EIVEVAGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTY-EI 382 (412)
Q Consensus 318 sgL~~VTFtW~g~-A-------keV~LaGSFNNW~~------~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~Y-EY 382 (412)
.+.+.|||.|.++ | ++|+|. +++|.. +.+|++. ...|+|+.++.|++|.| .|
T Consensus 28 ~~~~~vtF~~~~p~a~~~~~~~~~V~~~--~~~~~d~~~~~~~~~m~r~-----------~~~~~W~~t~~l~~~~~~~Y 94 (403)
T 3c8d_A 28 DEMFEVTFWWRDPQGSEEYSTIKRVWVY--ITGVTDHHQNSQPQSMQRI-----------AGTDVWQWTTQLNANWRGSY 94 (403)
T ss_dssp SSEEEEEEEEECTTCSTTTCCCCEEEEE--ETTTC-------CCBCEEC-----------TTSSEEEEEEEEETTCEEEE
T ss_pred CCcEEEEEEeeCCCcccccCccceEEEE--CcCCCccccccCccccccC-----------CCCCeEEEEEEECCCcEEEE
Confidence 3568999999987 5 799998 344432 2468774 26899999999999999 99
Q ss_pred EEEEC------------------------CeeecCCCCCcccC-C-CccceEEEe
Q 015154 383 KFIVD------------------------GQWKVDPQRESVTK-G-GICNNILRV 411 (412)
Q Consensus 383 KFIVD------------------------GeW~~DPd~PtVtD-~-G~vNNVL~V 411 (412)
.|+|| |..+.||.+|.... . |...|+|+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~ 149 (403)
T 3c8d_A 95 CFIPTERDDIFSAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEM 149 (403)
T ss_dssp EEEEESCCSTTCCC--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEEC
T ss_pred EEEecCcccccccccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccC
Confidence 99999 78889999998764 4 777888875
No 7
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.16 E-value=8.6e-06 Score=70.11 Aligned_cols=71 Identities=24% Similarity=0.573 Sum_probs=53.8
Q ss_pred CceEEEEEEecC---CceEEEEee---eCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE---
Q 015154 319 GLEVVEIQYSGD---GEIVEVAGS---FNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV--- 386 (412)
Q Consensus 319 gL~~VTFtW~g~---AkeV~LaGS---FNNW~~~--IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV--- 386 (412)
....|+|+.... ++.|+|+|+ +.+|++. ++|.... -+.....|++++.||.| .+||||+|
T Consensus 7 ~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~--------~~~~~~~W~~~v~lp~~~~~eYKyvi~~~ 78 (131)
T 2z0b_A 7 GPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPEN--------DTGESMLWKATIVLSRGVSVQYRYFKGYF 78 (131)
T ss_dssp CCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECC--------TTCCSSEEEEEEEECTTCCEEEEEEEEEE
T ss_pred CeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccc--------cCCCCCeEEEEEEcCCCCcEEEEEEEEee
Confidence 457889988763 899999999 8999973 6787631 01257899999999998 69999999
Q ss_pred -----C-C-------eeecCCCCC
Q 015154 387 -----D-G-------QWKVDPQRE 397 (412)
Q Consensus 387 -----D-G-------eW~~DPd~P 397 (412)
+ | .|...+++.
T Consensus 79 ~~~~~~~g~~~v~~~~WE~g~~NR 102 (131)
T 2z0b_A 79 LEPKTIGGPCQVIVHKWETHLQPR 102 (131)
T ss_dssp ECCCC----CEEEEEEECCSSCCE
T ss_pred cCccccCCccccceeeECCCCCCc
Confidence 5 3 688887443
No 8
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=97.85 E-value=1e-05 Score=66.66 Aligned_cols=75 Identities=27% Similarity=0.505 Sum_probs=55.7
Q ss_pred CceEEEEEEecC---CceEEEEeee---CCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEEC--
Q 015154 319 GLEVVEIQYSGD---GEIVEVAGSF---NGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVD-- 387 (412)
Q Consensus 319 gL~~VTFtW~g~---AkeV~LaGSF---NNW~~--~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIVD-- 387 (412)
+.+.|+|..... |+.|+|+|+. .+|++ .++|.... -+.+.+.|++++.||+| .+||||+|.
T Consensus 5 ~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~--------~~~~~~~W~~~v~lp~~~~~eYKy~v~~~ 76 (108)
T 1ac0_A 5 TAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADK--------YTSSDPLWYVTVTLPAGESFEYKFIRIES 76 (108)
T ss_dssp CCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSS--------SSSSCSSCEEEECCCSSSCEECCCEECCS
T ss_pred CeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccc--------cCCcCCeEEEEEEeCCCCeEEEEEEEEcC
Confidence 446788887653 8999999986 59986 36787631 00145799999999999 599999993
Q ss_pred -C--eeecCCCCCcccC
Q 015154 388 -G--QWKVDPQRESVTK 401 (412)
Q Consensus 388 -G--eW~~DPd~PtVtD 401 (412)
| .|..+|+.-....
T Consensus 77 ~g~~~WE~g~nR~~~~p 93 (108)
T 1ac0_A 77 DDSVEWESDPNREYTVP 93 (108)
T ss_dssp SSCCCCCCSSCCEECCC
T ss_pred CCCEEeccCCCEEEECC
Confidence 4 4888887766554
No 9
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.44 E-value=0.00035 Score=72.37 Aligned_cols=68 Identities=24% Similarity=0.357 Sum_probs=52.6
Q ss_pred eEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---CCee--ec
Q 015154 321 EVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--KV 392 (412)
Q Consensus 321 ~~VTFtW~g~-AkeV~LaGSFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIV---DGeW--~~ 392 (412)
..|+|+..++ |+.|.|.|+|++|.. .++|.+. ...|+|++++. +.+|.+ |+|.| ||.+ ..
T Consensus 25 ~gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~-----------~~~GvW~~~v~~~~~g~~-Y~f~i~~~~g~~~~~~ 92 (617)
T 1m7x_A 25 TGTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLR-----------KESGIWELFIPGAHNGQL-YKYEMIDANGNLRLKS 92 (617)
T ss_dssp EEEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCC-----------TTTTEEEEEEETCCTTCE-EEEEEECTTSCEEEEC
T ss_pred CcEEEEEECCCCCEEEEEEEeCCCCCceeEeEEC-----------CCCCEEEEEEcCCCCCCE-EEEEEEcCCCcEEEec
Confidence 5789976555 999999999999975 4789863 25799999987 788874 99999 6775 56
Q ss_pred CCCCCccc
Q 015154 393 DPQRESVT 400 (412)
Q Consensus 393 DPd~PtVt 400 (412)
||-...+.
T Consensus 93 DPya~~~~ 100 (617)
T 1m7x_A 93 DPYAFEAQ 100 (617)
T ss_dssp CTTCSSEE
T ss_pred Cccceeec
Confidence 87665443
No 10
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.24 E-value=0.00046 Score=73.92 Aligned_cols=69 Identities=26% Similarity=0.342 Sum_probs=52.8
Q ss_pred ceEEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE---CCee--e
Q 015154 320 LEVVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV---DGQW--K 391 (412)
Q Consensus 320 L~~VTFtW~g~-AkeV~LaGSFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIV---DGeW--~ 391 (412)
..-|+|+..++ |+.|.|.|+||+|+. ..+|.+. ...|+|++.+. +.+|. .|||.| ||+| +
T Consensus 135 ~~g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~-----------~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~ 202 (722)
T 3k1d_A 135 VSGVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVL-----------GPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDR 202 (722)
T ss_dssp EEEEEEEEECTTCSEEEEEEGGGTTCCCSCBCEEC-----------GGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEE
T ss_pred CceEEEEEECCCCCEEEEEeecCCCCCCcccCEEc-----------CCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEe
Confidence 44689976665 999999999999986 4688764 24699999986 88885 588888 5764 6
Q ss_pred cCCCCCccc
Q 015154 392 VDPQRESVT 400 (412)
Q Consensus 392 ~DPd~PtVt 400 (412)
.||-...+.
T Consensus 203 ~DPya~~~~ 211 (722)
T 3k1d_A 203 ADPFAFGTE 211 (722)
T ss_dssp CCTTCSSBC
T ss_pred ecccceeec
Confidence 788776554
No 11
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.08 E-value=0.00065 Score=72.86 Aligned_cols=64 Identities=20% Similarity=0.401 Sum_probs=48.7
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-------eCCeeEEEEEEEC---Ce
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-------LYPGTYEIKFIVD---GQ 389 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-------LPPG~YEYKFIVD---Ge 389 (412)
.|+|+..++ |+.|.|.|+||+|.. .++|.+. ..|+|++.+. +++|.+ |||.|+ |.
T Consensus 66 gv~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~------------~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~ 132 (755)
T 3aml_A 66 ATIYREWAPAAQEAQLIGEFNNWNGAKHKMEKD------------KFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGA 132 (755)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCTTCBCEEC------------TTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCC
T ss_pred eEEEEEECCCCCEEEEEEecCCCCCceeeceeC------------CCCEEEEEEcccccccCCCCCCE-EEEEEECCCCc
Confidence 588975555 999999999999975 4788863 5799999998 788865 888886 45
Q ss_pred e--ecCCCCCc
Q 015154 390 W--KVDPQRES 398 (412)
Q Consensus 390 W--~~DPd~Pt 398 (412)
| +.||-...
T Consensus 133 ~~~~~dpya~~ 143 (755)
T 3aml_A 133 WVDRIPAWIRY 143 (755)
T ss_dssp CEEECCTTCSC
T ss_pred EEecCCcchhe
Confidence 5 34664443
No 12
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.05 E-value=0.017 Score=60.53 Aligned_cols=71 Identities=21% Similarity=0.382 Sum_probs=53.7
Q ss_pred CceEEEEEEec-----CCceEEEEeeeC---CCcc--------cc-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eE
Q 015154 319 GLEVVEIQYSG-----DGEIVEVAGSFN---GWHH--------RI-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TY 380 (412)
Q Consensus 319 gL~~VTFtW~g-----~AkeV~LaGSFN---NW~~--------~I-pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~Y 380 (412)
+.+.|+|+... .|+.|+|+|+-. +|++ .+ +|.. .....|++++.||+| .+
T Consensus 580 ~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~------------~~~~~W~~~v~l~~~~~~ 647 (686)
T 1qho_A 580 TQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLA------------PNYPDWFYVFSVPAGKTI 647 (686)
T ss_dssp SEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBC------------TTTTSEEEEEEEETTCEE
T ss_pred CeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhccccc------------CCCCcEEEEEEeCCCCeE
Confidence 35678888764 478999999984 8987 23 5543 256789999999998 69
Q ss_pred EEEEEE---CC--eeecCCCCCcccC
Q 015154 381 EIKFIV---DG--QWKVDPQRESVTK 401 (412)
Q Consensus 381 EYKFIV---DG--eW~~DPd~PtVtD 401 (412)
||||+| +| +|...|+.-....
T Consensus 648 eyKy~~~~~~~~~~We~~~nr~~~~~ 673 (686)
T 1qho_A 648 QFKFFIKRADGTIQWENGSNHVATTP 673 (686)
T ss_dssp EEEEEEECTTSCEEECCSSCEEEECC
T ss_pred EEEEEEEcCCCCEEeCCCCCeeEECC
Confidence 999998 34 4888877766554
No 13
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=95.95 E-value=0.026 Score=59.06 Aligned_cols=74 Identities=22% Similarity=0.316 Sum_probs=55.2
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 015154 319 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 386 (412)
Q Consensus 319 gL~~VTFtW~g----~AkeV~LaGSFN---NW~~~--I-pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV- 386 (412)
+.+.|+|+... .|+.|+|+|+-. +|++. + +|.... ......|++++.||.| .+||||++
T Consensus 578 ~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~v~~ 648 (680)
T 1cyg_A 578 DQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQV---------VYSYPTWYIDVSVPEGKTIEFKFIKK 648 (680)
T ss_dssp CEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEESSCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 45788998865 389999999875 99864 5 666410 0256799999999988 79999998
Q ss_pred --CC--eeecCCCCCcccC
Q 015154 387 --DG--QWKVDPQRESVTK 401 (412)
Q Consensus 387 --DG--eW~~DPd~PtVtD 401 (412)
+| .|...++.-....
T Consensus 649 ~~~~~~~WE~g~Nr~~~~~ 667 (680)
T 1cyg_A 649 DSQGNVTWESGSNHVYTTP 667 (680)
T ss_dssp CTTSCEEECCSSCEEEECC
T ss_pred eCCCCeEeCCCCCeeEECC
Confidence 34 4888877665554
No 14
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=95.95 E-value=0.015 Score=49.01 Aligned_cols=65 Identities=18% Similarity=0.270 Sum_probs=50.9
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCccc--cccCCCCCCCccccccccCCCcE-EEEEEeCCe-eEEEEEEECCe--eec
Q 015154 321 EVVEIQYSGDGEIVEVAGSFN--GWHHR--IKMDPLPSSSIIEPIRSRKSRLW-STVLWLYPG-TYEIKFIVDGQ--WKV 392 (412)
Q Consensus 321 ~~VTFtW~g~AkeV~LaGSFN--NW~~~--IpM~kd~ss~~~a~~~sk~~G~F-s~tL~LPPG-~YEYKFIVDGe--W~~ 392 (412)
..|+|.|..+.+.|+|...+. +|... ++|.+. .-++ | .+++.|+.| .++|+|. ||. |-.
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~-----------~~~g-w~~~TI~l~~g~~~~~~F~-dG~~~WDN 71 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDA-----------EISG-YAKITVDIGSASQLEAAFN-DGNNNWDS 71 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEE-----------TTTT-EEEEEEECTTCSCEEEEEE-CSSSCEES
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccc-----------cCCC-eEEEEEECCCCCEEEEEEe-CCCCcCcC
Confidence 578999998899999999984 89864 578753 1134 6 699999976 8999995 874 998
Q ss_pred CCCCCc
Q 015154 393 DPQRES 398 (412)
Q Consensus 393 DPd~Pt 398 (412)
++....
T Consensus 72 n~g~Ny 77 (104)
T 2laa_A 72 NNTKNY 77 (104)
T ss_dssp TTTSCE
T ss_pred CCCccE
Confidence 877654
No 15
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=95.73 E-value=0.024 Score=59.47 Aligned_cols=73 Identities=27% Similarity=0.517 Sum_probs=53.1
Q ss_pred eEEEEEEecC---CceEEEEeeeC---CCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE---CC
Q 015154 321 EVVEIQYSGD---GEIVEVAGSFN---GWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV---DG 388 (412)
Q Consensus 321 ~~VTFtW~g~---AkeV~LaGSFN---NW~~--~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV---DG 388 (412)
+.|+|+.... |+.|+|+|+-. +|++ .++|.... -+..+..|++++.||+| .+||||+| +|
T Consensus 497 v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~--------~t~~~~~W~~~v~lp~~~~~eYKyvv~~~~g 568 (599)
T 2vn4_A 497 VAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVN--------YADNHPLWIGTVNLEAGDVVEYKYINVGQDG 568 (599)
T ss_dssp EEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTT--------CBTTBCEEEEEEEEETTCEEEEEEEEECTTC
T ss_pred EEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeeccccc--------CCCCCCcEEEEEEcCCCCcEEEEEEEECCCC
Confidence 5688887653 89999999884 8986 36787631 00124789999999998 69999998 34
Q ss_pred --eeecCCCCCcccC
Q 015154 389 --QWKVDPQRESVTK 401 (412)
Q Consensus 389 --eW~~DPd~PtVtD 401 (412)
.|...|+.-....
T Consensus 569 ~~~WE~g~NR~~~~p 583 (599)
T 2vn4_A 569 SVTWESDPNHTYTVP 583 (599)
T ss_dssp CEEECCSSCEEEECC
T ss_pred ceEeCCCCCEEEecC
Confidence 3877777655444
No 16
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=95.69 E-value=0.011 Score=63.08 Aligned_cols=56 Identities=9% Similarity=0.094 Sum_probs=43.8
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-----ccccCCCCCCCccccccccCCCcEEEEEE-eC------CeeEEEEEEECC
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHH-----RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LY------PGTYEIKFIVDG 388 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~-----~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LP------PG~YEYKFIVDG 388 (412)
.|+|+..++ |+.|.|.+ |++|.. .++|.+. ..|+|++.+. +. +|.|.|+|.|+|
T Consensus 17 ~~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g 83 (750)
T 1bf2_A 17 NITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPA------------GSGVWAVTVPVSSIKAAGITGAVYYGYRAWG 83 (750)
T ss_dssp EEEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEEC------------STTEEEEEEEHHHHHHTTCCSCCEEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEE-EccCCCCccceEEecccC------------CCCEEEEEECCcccccccCCCCEEEEEEEEe
Confidence 388875555 99999998 987653 4678753 5699999986 66 899999999998
Q ss_pred ee
Q 015154 389 QW 390 (412)
Q Consensus 389 eW 390 (412)
.|
T Consensus 84 ~~ 85 (750)
T 1bf2_A 84 PN 85 (750)
T ss_dssp TT
T ss_pred ee
Confidence 53
No 17
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=95.54 E-value=0.0071 Score=61.97 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=49.9
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCe-eecCCCCCc
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ-WKVDPQRES 398 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVDGe-W~~DPd~Pt 398 (412)
.|+|+..++ |+.|.|.|.|+ ..++|.+. ..|+|++.+. +.+|. .|+|.|||. ...||-...
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~------------~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERD------------EKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEEC------------TTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccC------------CCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 578876665 99999999987 56899874 5799999996 88895 699999997 788987653
No 18
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=95.32 E-value=0.019 Score=60.09 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=42.9
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCe
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQ 389 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~--~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVDGe 389 (412)
.|+|+..++ |+.|.|.+ |+++. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.
T Consensus 20 g~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 20 GVNFTLFSAHAERVELCV-FDANGQEHRYDLPGH------------SGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEEECSSCSEEEEEE-ECTTCCEEEEECCEE------------ETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred eEEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCC------------CCCEEEEEECCCCCCCE-EEEEEeee
Confidence 588975555 99999999 98765 35789753 5699999885 788987 99999984
No 19
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=95.30 E-value=0.037 Score=57.90 Aligned_cols=74 Identities=22% Similarity=0.323 Sum_probs=53.8
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 015154 319 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 386 (412)
Q Consensus 319 gL~~VTFtW~g----~AkeV~LaGSFN---NW~~~--I-pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV- 386 (412)
+.+.|+|+... .|+.|+|+|+-. +|++. + +|.... +.....|++++.||.| .+||||++
T Consensus 582 ~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 652 (683)
T 3bmv_A 582 NQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQV---------VYQYPTWYYDVSVPAGTTIQFKFIKK 652 (683)
T ss_dssp SEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSS---------SSCTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccC---------CCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 35788998866 389999999885 99863 5 676410 0246799999999988 79999997
Q ss_pred CC---eeecCCCCCcccC
Q 015154 387 DG---QWKVDPQRESVTK 401 (412)
Q Consensus 387 DG---eW~~DPd~PtVtD 401 (412)
|+ .|...|+.-....
T Consensus 653 ~~~~~~WE~g~Nr~~~~~ 670 (683)
T 3bmv_A 653 NGNTITWEGGSNHTYTVP 670 (683)
T ss_dssp SSSCCEECCSSCEEEECC
T ss_pred cCCceEecCCCCeeEECC
Confidence 32 4777766555444
No 20
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.12 E-value=0.046 Score=56.49 Aligned_cols=72 Identities=19% Similarity=0.279 Sum_probs=52.6
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc---cccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 015154 319 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR---IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 386 (412)
Q Consensus 319 gL~~VTFtW~g----~AkeV~LaGSFN---NW~~~---IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV- 386 (412)
..+.|+|+... .|+.|+|+|+-. +|+.. ++|... ..++.|++++.||.| ..||||+|
T Consensus 418 ~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~-----------~~p~~W~~~v~lp~~~~~eYKyv~~ 486 (516)
T 1vem_A 418 TPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYD-----------SHSNDWRGNVVLPAERNIEFKAFIK 486 (516)
T ss_dssp CEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEE-----------TTTTEEEEEEEEETTCCEEEEEEEE
T ss_pred CccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccC-----------CCCCEEEEEEEECCCCcEEEEEEEE
Confidence 35789998764 389999999884 89874 356431 234599999999988 59999998
Q ss_pred C--C---eeecCCCCCcccC
Q 015154 387 D--G---QWKVDPQRESVTK 401 (412)
Q Consensus 387 D--G---eW~~DPd~PtVtD 401 (412)
| | +|...++.-....
T Consensus 487 ~~~g~v~~WE~g~NR~~~~p 506 (516)
T 1vem_A 487 SKDGTVKSWQTIQQSWNPVP 506 (516)
T ss_dssp CTTSCEEEECSSCEEESSCC
T ss_pred eCCCCeeEEeCCCCEEEecC
Confidence 3 3 4777766554444
No 21
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=95.07 E-value=0.016 Score=60.22 Aligned_cols=62 Identities=19% Similarity=0.187 Sum_probs=48.6
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCCCCCccc
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDPQRESVT 400 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DPd~PtVt 400 (412)
.|+|+..++ |+.|.|.|. + ..++|.+. ..|+|++.+.+.+|.+ |+|.|||....||-...+.
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~------------~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~~ 97 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSL------------GGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFLP 97 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEE------------ETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCCT
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeC------------CCcEEEEEEECCCCcE-EEEEECCeEecCCCccccC
Confidence 688875555 999999994 2 45889873 4689999999889986 9999999767788766543
No 22
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.02 E-value=0.05 Score=56.91 Aligned_cols=74 Identities=20% Similarity=0.280 Sum_probs=53.2
Q ss_pred CceEEEEEEec----CCceEEEEeeeC---CCccc--c-ccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-
Q 015154 319 GLEVVEIQYSG----DGEIVEVAGSFN---GWHHR--I-KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV- 386 (412)
Q Consensus 319 gL~~VTFtW~g----~AkeV~LaGSFN---NW~~~--I-pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV- 386 (412)
..+.|+|+... .|+.|+|+|+-. +|++. + +|.... +.....|++++.||.| .+||||++
T Consensus 585 ~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~---------~~~~~~W~~~v~lp~~~~~eyK~~~~ 655 (686)
T 1d3c_A 585 DQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQV---------VYQYPNWYYDVSVPAGKTIEFKFLKK 655 (686)
T ss_dssp SEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSS---------SSCTTCEEEEEEEETTCEEEEEEEEE
T ss_pred CeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccc---------CCCCCeEEEEEEeCCCCcEEEEEEEE
Confidence 35788898865 389999999885 99864 5 565410 0246799999999988 79999997
Q ss_pred C-C--eeecCCCCCcccC
Q 015154 387 D-G--QWKVDPQRESVTK 401 (412)
Q Consensus 387 D-G--eW~~DPd~PtVtD 401 (412)
| + .|...++.-....
T Consensus 656 ~~~~~~WE~g~Nr~~~~~ 673 (686)
T 1d3c_A 656 QGSTVTWEGGSNHTFTAP 673 (686)
T ss_dssp ETTEEEECCSSCEEEECC
T ss_pred cCCceEecCCCCeEEECC
Confidence 2 2 3776666554443
No 23
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=94.91 E-value=0.037 Score=58.74 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=42.7
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc-----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECCee
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWH-----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDGQW 390 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~-----~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVDGeW 390 (412)
.|+|+..++ |+.|.|.+ |+.+. ..++|.+. ..|+|.+.+. +.+|.+ |+|.|+|.|
T Consensus 30 g~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~------------~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 30 GVNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNK------------TGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEE------------SSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred eEEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccC------------CCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 588875555 99999999 87544 24778763 5799999885 789987 999999854
No 24
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=93.97 E-value=0.067 Score=54.83 Aligned_cols=60 Identities=12% Similarity=0.034 Sum_probs=43.1
Q ss_pred ceEEEEE-EecCCceEEE-EeeeCCCcc----ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 015154 320 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH----RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 387 (412)
Q Consensus 320 L~~VTFt-W~g~AkeV~L-aGSFNNW~~----~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVD 387 (412)
...++|+ |...++.|.| .|.|++|+. .++|.+.. .+...|+|++.+......+.|||.|.
T Consensus 22 ~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 22 QLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAG--------SDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp EEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEE--------ECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEee--------cCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 3455554 4456999999 899999964 47888641 01124579999998777889999885
No 25
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=93.27 E-value=0.16 Score=53.79 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=48.0
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEC--Cee--ecCC
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD--GQW--KVDP 394 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVD--GeW--~~DP 394 (412)
.|+|+..++ |+.|.|.+.|++|.. .++|.+. ..|+|++.+. +.+|. .|+|.|+ |.| ..||
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~------------~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DP 180 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRL------------EKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQ 180 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEEC------------GGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCT
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccC------------CCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCC
Confidence 588976555 999999999998864 4789874 4689999887 55673 4666664 764 5688
Q ss_pred CCCccc
Q 015154 395 QRESVT 400 (412)
Q Consensus 395 d~PtVt 400 (412)
-...+.
T Consensus 181 ya~~~~ 186 (718)
T 2e8y_A 181 YAKAVT 186 (718)
T ss_dssp TCSSBC
T ss_pred cccccc
Confidence 766543
No 26
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=92.74 E-value=0.1 Score=58.49 Aligned_cols=67 Identities=18% Similarity=0.105 Sum_probs=49.5
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc-ccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEEC------Ce--
Q 015154 322 VVEIQYSGD-GEIVEVAG-SFNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVD------GQ-- 389 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaG-SFNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVD------Ge-- 389 (412)
.|+|+..++ |+.|.|.+ .|++|.. .++|.+. ...|+|++.+. +.+|.| |+|.|+ |.
T Consensus 305 gv~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~-----------~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~ 372 (1083)
T 2fhf_A 305 GVTFRVWAPTAQQVELVIYSADKKVIASHPMTRD-----------SASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVE 372 (1083)
T ss_dssp EEEEEEECTTCSEEEEEEECTTCCEEEEEECEEC-----------TTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEEEcCCCCccceEECeEC-----------CCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccc
Confidence 588986555 99999999 8899975 4788753 25689999885 788865 778775 43
Q ss_pred --eecCCCCCccc
Q 015154 390 --WKVDPQRESVT 400 (412)
Q Consensus 390 --W~~DPd~PtVt 400 (412)
...||-...+.
T Consensus 373 ~~~~~DPYa~~~~ 385 (1083)
T 2fhf_A 373 QYEVTDPYAHSLS 385 (1083)
T ss_dssp EEEECCTTCSCBC
T ss_pred cceecCCccceec
Confidence 46787765543
No 27
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=92.55 E-value=0.092 Score=53.88 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=43.8
Q ss_pred CceEEEEE-EecCCceEEE-EeeeCCCcc------ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 015154 319 GLEVVEIQ-YSGDGEIVEV-AGSFNGWHH------RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 387 (412)
Q Consensus 319 gL~~VTFt-W~g~AkeV~L-aGSFNNW~~------~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVD 387 (412)
....++|+ |...++.|.| .|.|++|+. .++|.+..+ +...|.|++.+......+.|+|.|+
T Consensus 21 ~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~--------~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 21 ETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGS--------DELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEE--------CSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeec--------CCCeEEEEEEEECCCcEEEEEEEEE
Confidence 34566675 4456999999 799999964 478986410 1124579999988777788999885
No 28
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=91.47 E-value=0.035 Score=56.18 Aligned_cols=70 Identities=20% Similarity=0.411 Sum_probs=0.0
Q ss_pred ceEEEEEE-ec---CCceEEEEeeeC---CCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEE-C-
Q 015154 320 LEVVEIQY-SG---DGEIVEVAGSFN---GWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIV-D- 387 (412)
Q Consensus 320 L~~VTFtW-~g---~AkeV~LaGSFN---NW~~--~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIV-D- 387 (412)
.+.|+|+. .. .|+.|+|+|+-. +|++ .++|... .....|++++.||+| .+||||+| |
T Consensus 430 ~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~-----------~~~~~W~~~v~lp~~~~~eyKy~~~~~ 498 (527)
T 1gcy_A 430 LVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDT-----------SGYPTWKGSIALPAGQNEEWKCLIRNE 498 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccC-----------CCCCeEEEEEEeCCCCcEEEEEEEEeC
Confidence 35677775 33 389999999885 8987 4678631 145789999999999 69999996 3
Q ss_pred -C-----eeecCCCCCccc
Q 015154 388 -G-----QWKVDPQRESVT 400 (412)
Q Consensus 388 -G-----eW~~DPd~PtVt 400 (412)
| +|...|+.-...
T Consensus 499 ~~~~~~~~We~g~nr~~~~ 517 (527)
T 1gcy_A 499 ANATQVRQWQGGANNSLTP 517 (527)
T ss_dssp -------------------
T ss_pred CCCcceeEecCCCCeeEEC
Confidence 3 377666665443
No 29
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=91.43 E-value=0.22 Score=54.51 Aligned_cols=63 Identities=16% Similarity=0.243 Sum_probs=45.7
Q ss_pred EEEEEEecC-CceEEEEeeeCCCc----cccccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEE--CCe--ee
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWH----HRIKMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIV--DGQ--WK 391 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~----~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIV--DGe--W~ 391 (412)
.|+|+..++ |+.|.|.+ |++|. ..++|.+. ..|+|++.+. +.+|.+ |+|.| +|. ..
T Consensus 326 gv~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~g~~-Y~y~v~~~g~~~~~ 391 (921)
T 2wan_A 326 ATSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKS------------DNGTWKLQVSGNLENWY-YLYQVTVNGTTQTA 391 (921)
T ss_dssp EEEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEEC------------GGGEEEEEEESCCTTCE-EEEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeC------------CCCEEEEEEccCCCCCE-EEEEEEeCCeEEEe
Confidence 588876665 99999997 99994 35789874 4689999886 567753 66666 565 45
Q ss_pred cCCCCCc
Q 015154 392 VDPQRES 398 (412)
Q Consensus 392 ~DPd~Pt 398 (412)
.||-...
T Consensus 392 ~DPya~~ 398 (921)
T 2wan_A 392 VDPYARA 398 (921)
T ss_dssp CCTTCSS
T ss_pred cCCccee
Confidence 6876554
No 30
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=91.12 E-value=0.32 Score=50.89 Aligned_cols=62 Identities=19% Similarity=0.232 Sum_probs=46.5
Q ss_pred EEEEEEecC-CceEEEEeeeCCCccccccCCCCCCCccccccccCCCcEEEEE-EeCCeeEEEEEEEC-CeeecCCCCCc
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHHRIKMDPLPSSSIIEPIRSRKSRLWSTVL-WLYPGTYEIKFIVD-GQWKVDPQRES 398 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL-~LPPG~YEYKFIVD-GeW~~DPd~Pt 398 (412)
.|+|+..++ |+.|.|.+ +|. .++|.+. ..|.|.+.+ .+.+|. .|+|.|+ |....||-...
T Consensus 43 ~~~F~vwap~a~~v~l~~---~~~-~~~m~~~------------~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~ 105 (618)
T 3m07_A 43 VVRFRLWATGQQKVMLRL---AGK-DQEMQAN------------GDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRA 105 (618)
T ss_dssp EEEEEEECTTCSCEEEEE---TTE-EEECEEC------------STTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEE---CCC-cccCeec------------CCEEEEEEeCCCCCCC-EEEEEEeCCeEecccccee
Confidence 578976655 99999998 354 4789874 568999887 477886 5889995 56888987665
Q ss_pred cc
Q 015154 399 VT 400 (412)
Q Consensus 399 Vt 400 (412)
..
T Consensus 106 ~~ 107 (618)
T 3m07_A 106 QK 107 (618)
T ss_dssp BS
T ss_pred ee
Confidence 43
No 31
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=90.81 E-value=0.12 Score=56.55 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=48.2
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCee-----EEEEEEECC--e-
Q 015154 323 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGT-----YEIKFIVDG--Q- 389 (412)
Q Consensus 323 VTFtW~g~-AkeV~LaG-SFNNW~~---~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~-----YEYKFIVDG--e- 389 (412)
|.|+..++ |+.|.|.+ .+++|.. .++|.+. ..|+|++.+.+.||. +.|+|.|++ .
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~ 213 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKN------------NKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDK 213 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEEC------------TTSEEEEEECGGGTCSCCTTCEEEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccC------------CCCEEEEEECCCCCCccCCCeEEEEEEeeCCce
Confidence 88986555 99999998 6778853 5789763 679999999776662 678888863 3
Q ss_pred -eecCCCCCcc
Q 015154 390 -WKVDPQRESV 399 (412)
Q Consensus 390 -W~~DPd~PtV 399 (412)
...||-...+
T Consensus 214 ~~~~DPYA~~~ 224 (877)
T 3faw_A 214 VKILDPYAKSL 224 (877)
T ss_dssp EEECCTTCSCB
T ss_pred eEecCccceec
Confidence 5668876543
No 32
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=90.72 E-value=0.18 Score=52.81 Aligned_cols=54 Identities=15% Similarity=0.038 Sum_probs=38.3
Q ss_pred EEEEEEecC-CceEEEEeeeCCCcccc--ccCCCCCCCccccccccCCCcEEEEEE-eCCeeEEEEEEECC
Q 015154 322 VVEIQYSGD-GEIVEVAGSFNGWHHRI--KMDPLPSSSIIEPIRSRKSRLWSTVLW-LYPGTYEIKFIVDG 388 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaGSFNNW~~~I--pM~kd~ss~~~a~~~sk~~G~Fs~tL~-LPPG~YEYKFIVDG 388 (412)
-|+|+..++ |+.|.|.+-+++|.... .|.+ ...|+|++.+. +.+|.| |+|.|+|
T Consensus 137 g~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~------------~~~g~W~~~~~~~~~g~~-Y~y~v~~ 194 (884)
T 4aio_A 137 SVSLHLWAPTAQGVSVCFFDGPAGPALETVQLK------------ESNGVWSVTGPREWENRY-YLYEVDV 194 (884)
T ss_dssp EEEEEEECTTCSEEEEEEESTTTSCEEEEEECE------------EETTEEEEEEEGGGTTCE-EEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCeeeeeeec------------CCCCEEEEEECCCCCCCE-EEEEEeC
Confidence 489985555 99999999555565432 2322 35799999986 667754 8888875
No 33
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=90.54 E-value=0.26 Score=52.05 Aligned_cols=65 Identities=18% Similarity=0.292 Sum_probs=46.4
Q ss_pred EEEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEe--CCe-----eEEEEEEEC--
Q 015154 322 VVEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWL--YPG-----TYEIKFIVD-- 387 (412)
Q Consensus 322 ~VTFtW~g~-AkeV~LaG-SFNNW~~---~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~L--PPG-----~YEYKFIVD-- 387 (412)
.|.|+..++ |+.|.|.+ .|++|.. .++|.+. ..|+|++.+.- .+| -+.|+|.|+
T Consensus 25 gv~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~ 92 (714)
T 2ya0_A 25 QVDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQ 92 (714)
T ss_dssp EEEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSSCSCCTTCEEEEEEEET
T ss_pred EEEEEEECCCCCEEEEEEEeCCCCCccceEEeCccC------------CCCEEEEEECCccCCCccccCCcEEEEEEEeC
Confidence 388975555 99999999 7888864 5788763 56899998863 134 267888886
Q ss_pred Ce--eecCCCCCc
Q 015154 388 GQ--WKVDPQRES 398 (412)
Q Consensus 388 Ge--W~~DPd~Pt 398 (412)
|. -..||-...
T Consensus 93 ~~~~~~~DPya~~ 105 (714)
T 2ya0_A 93 GKTVLALDPYAKS 105 (714)
T ss_dssp TEEEEECCTTCSE
T ss_pred CceEEecCCceee
Confidence 64 357886543
No 34
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=87.21 E-value=0.64 Score=50.94 Aligned_cols=51 Identities=22% Similarity=0.403 Sum_probs=37.6
Q ss_pred cCCceEEEEeee-------CCCcccc---ccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeee
Q 015154 329 GDGEIVEVAGSF-------NGWHHRI---KMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 391 (412)
Q Consensus 329 g~AkeV~LaGSF-------NNW~~~I---pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~ 391 (412)
..+..+.+.|+| .+|.+.- -|.. ..+|.|+.+-.||+|.||||+.++|.|.
T Consensus 161 ~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~------------~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 161 ANPVTAVLVGDLQQALGAANNWSPDDDHTLLKK------------INPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp CCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEE------------EETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred ccccccccccchhhhccccccCCCCCCcceeec------------cCCcceeeeeccCCcceeEEEeecCccc
Confidence 345678888876 4676532 1322 2468999999999999999999998884
No 35
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=85.96 E-value=0.18 Score=51.72 Aligned_cols=60 Identities=18% Similarity=0.220 Sum_probs=42.0
Q ss_pred ceEEEEE-EecCCceEEE-EeeeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 015154 320 LEVVEIQ-YSGDGEIVEV-AGSFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 387 (412)
Q Consensus 320 L~~VTFt-W~g~AkeV~L-aGSFNNW~~---~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVD 387 (412)
...++|+ |...++.|.| .|.|++|.. .++|.+.. .+...|.|++.+......+.|||.|.
T Consensus 22 ~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~--------~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 22 TVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLA--------TDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp CEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEE--------ECSSCEEECCEECCTTSCEEECBCCE
T ss_pred EEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEe--------ccCCeEEEEEEEECCCceEEEEEEEE
Confidence 3455564 4445999999 799999965 47898741 01124579999987777778888773
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=85.15 E-value=0.41 Score=49.58 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=40.7
Q ss_pred eEEEEEEe----cC-CceEEEEeeeCCCccccccCC--CCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECC
Q 015154 321 EVVEIQYS----GD-GEIVEVAGSFNGWHHRIKMDP--LPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDG 388 (412)
Q Consensus 321 ~~VTFtW~----g~-AkeV~LaGSFNNW~~~IpM~k--d~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDG 388 (412)
..|+|+.. ++ ++.|.|.+.|++=...++|.+ .. .+...|+|++.+........|+|.|+|
T Consensus 30 ~~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~--------~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 30 QSVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSND--------PTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CCEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEEC--------TTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred CEEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeecc--------ccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 35777644 44 899999999875112478876 21 012347999999866566679999975
No 37
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=81.78 E-value=0.9 Score=41.26 Aligned_cols=51 Identities=12% Similarity=0.084 Sum_probs=39.2
Q ss_pred CCceEEEEeeeCCCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeee
Q 015154 330 DGEIVEVAGSFNGWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWK 391 (412)
Q Consensus 330 ~AkeV~LaGSFNNW~~--~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~ 391 (412)
..+++||+|++++|.- ..+|.+.. ...|.|..++.|+-|. +|||.-+..|-
T Consensus 11 ~p~~lY~vG~~~gW~~~~~~~m~~~~----------~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 11 PPKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CCSCCEEEETTTCTTSCCEEECEECT----------TCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred CcceEEEEecCCCCCCCccceeeecc----------CCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 3788999999998853 36776642 3578999999998764 89999876553
No 38
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=80.70 E-value=2.9 Score=35.03 Aligned_cols=65 Identities=17% Similarity=0.292 Sum_probs=47.3
Q ss_pred eEEEEEEecCCceEEEEeeeC--CCcc--ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEECC--eeecC
Q 015154 321 EVVEIQYSGDGEIVEVAGSFN--GWHH--RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDG--QWKVD 393 (412)
Q Consensus 321 ~~VTFtW~g~AkeV~LaGSFN--NW~~--~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIVDG--eW~~D 393 (412)
..|++.|..+...|+|-=.+. +|.. .++|.+. .-.|.|..++.|+.+ .++|.| -|| .|-.+
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~-----------~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN 77 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKS-----------EXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNN 77 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEEC-----------SSTTEEEEEECCCTTCEEEEEE-ECSSSCEECG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCcccc-----------ccCCceEEEEecCCCceEEEEE-eCCCcccccC
Confidence 457788877789998886675 4876 3779763 136788999999975 899999 665 59765
Q ss_pred CCCC
Q 015154 394 PQRE 397 (412)
Q Consensus 394 Pd~P 397 (412)
....
T Consensus 78 ~g~N 81 (102)
T 2c3v_A 78 QGRD 81 (102)
T ss_dssp GGTC
T ss_pred CCcc
Confidence 5444
No 39
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=77.99 E-value=3.1 Score=46.16 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=44.8
Q ss_pred EEEEEecC-CceEEEEe-eeCCCcc---ccccCCCCCCCccccccccCCCcEEEEEEeC--Ce-----eEEEEEEEC--C
Q 015154 323 VEIQYSGD-GEIVEVAG-SFNGWHH---RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLY--PG-----TYEIKFIVD--G 388 (412)
Q Consensus 323 VTFtW~g~-AkeV~LaG-SFNNW~~---~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LP--PG-----~YEYKFIVD--G 388 (412)
|.|+..++ |+.|.|.+ .|++|.. .++|.+. ..|+|++.+.-. +| -+.|+|.|+ |
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~------------~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~ 400 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKG------------ERGTWKQTLDSTNKLGITDFTGYYYQYQIERQG 400 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEEC------------GGGEEEEEECTTCSSCCSCCTTCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccC------------CCCEEEEEEcccccCCccccCCcEEEEEEEeCC
Confidence 78976555 99999999 7888864 4788763 568999988631 23 256777775 5
Q ss_pred e--eecCCCCC
Q 015154 389 Q--WKVDPQRE 397 (412)
Q Consensus 389 e--W~~DPd~P 397 (412)
. ...||-..
T Consensus 401 ~~~~~~DPYa~ 411 (1014)
T 2ya1_A 401 KTVLALDPYAK 411 (1014)
T ss_dssp EEEEECCTTCS
T ss_pred eEEEecCccce
Confidence 4 45788643
No 40
>4ham_A LMO2241 protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, winged helix-turn-helix, four helix bundle; 1.91A {Listeria monocytogenes}
Probab=58.79 E-value=8.1 Score=32.11 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHhhh
Q 015154 62 EELYNDLREFLSTVGLSESH-VPSMKELSAH 91 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~~-vps~kels~h 91 (412)
+.+++.|++.|-+-.|++|. +||.+||++.
T Consensus 17 ~QI~~~i~~~I~~G~l~pG~~LPser~La~~ 47 (134)
T 4ham_A 17 EQIVQKIKEQVVKGVLQEGEKILSIREFASR 47 (134)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEECCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCccHHHHHHH
Confidence 67999999999999999995 9999999875
No 41
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.58 E-value=13 Score=33.24 Aligned_cols=71 Identities=11% Similarity=0.257 Sum_probs=45.3
Q ss_pred EEEEEEec--CCceEEEEeeeCCCcccc--ccCCCCCCCccccccccCCCcEEEEEEeCC-----e--eEEEEEEECCe-
Q 015154 322 VVEIQYSG--DGEIVEVAGSFNGWHHRI--KMDPLPSSSIIEPIRSRKSRLWSTVLWLYP-----G--TYEIKFIVDGQ- 389 (412)
Q Consensus 322 ~VTFtW~g--~AkeV~LaGSFNNW~~~I--pM~kd~ss~~~a~~~sk~~G~Fs~tL~LPP-----G--~YEYKFIVDGe- 389 (412)
.-++.... -.+.|.|.=+|++|.... ++...++ ..+......|...+.||+ + .+-++|.|+|.
T Consensus 49 ~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~-----~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~e 123 (156)
T 2eef_A 49 AGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKD-----TYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQT 123 (156)
T ss_dssp EEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCC-----SSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTEE
T ss_pred EEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccc-----cCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCCE
Confidence 33444433 279999999999998753 3433211 111123457999998886 3 67789999996
Q ss_pred -eecCCCCC
Q 015154 390 -WKVDPQRE 397 (412)
Q Consensus 390 -W~~DPd~P 397 (412)
|-.+....
T Consensus 124 yWDNN~G~N 132 (156)
T 2eef_A 124 YWDSNRGKN 132 (156)
T ss_dssp EEESGGGSC
T ss_pred EecCCCCee
Confidence 76654433
No 42
>3tqn_A Transcriptional regulator, GNTR family; regulatory functions; 2.80A {Coxiella burnetii}
Probab=57.56 E-value=9 Score=31.06 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHhhhchhh
Q 015154 62 EELYNDLREFLSTVGLSESH-VPSMKELSAHGRDD 95 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~~-vps~kels~hgr~d 95 (412)
..+++.|++.|.+-.+|+|. +||.+||+++=.+-
T Consensus 12 ~~i~~~i~~~I~~g~~~~G~~lPs~~~La~~~~vS 46 (113)
T 3tqn_A 12 QQLRDKIVEAIIDGSYVEGEMIPSIRKISTEYQIN 46 (113)
T ss_dssp HHHHHHHHHHHHHTSSCTTCEECCHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHcCCCCCCCcCcCHHHHHHHHCcC
Confidence 57899999999999999885 89999999874443
No 43
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.21 E-value=12 Score=37.19 Aligned_cols=46 Identities=15% Similarity=0.242 Sum_probs=34.5
Q ss_pred CceEEEEeeeCCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEEC
Q 015154 331 GEIVEVAGSFNGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVD 387 (412)
Q Consensus 331 AkeV~LaGSFNNW~~~--IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVD 387 (412)
.+..||.|++++|... .+|.++. ...+.|.....+..+. +|||+.-
T Consensus 150 ~~~~YlvG~~~gW~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 150 PDGYYIVGDFTGWDGNSAQQMKKDA----------LDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TTCEEEEETTTCSSGGGCEECEECS----------SCTTEEEEEEEESSCC-EEEEEEG
T ss_pred cceeEEEcccCCCCcccCeeeeeec----------CCCceEEEEEEeccCc-eEEEeec
Confidence 4679999999999853 4455432 3678899988887666 7999964
No 44
>3neu_A LIN1836 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; 1.58A {Listeria innocua}
Probab=49.64 E-value=16 Score=30.22 Aligned_cols=48 Identities=15% Similarity=0.227 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHhhhchhhHHHHHHhhhHHHHHHHHhC
Q 015154 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHGRDDLANIVRRRGYKFIRQLLKS 114 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~-~vps~kels~hgr~dlan~vrrrgyk~i~~l~~~ 114 (412)
..+++.|++.|.+-.+|+| .+||.+||+++=.+-- +-|| +.++.|...
T Consensus 16 ~~i~~~i~~~I~~g~~~~g~~Lps~~~La~~~~vSr-~tvr----~Al~~L~~~ 64 (125)
T 3neu_A 16 SQISDWMKKQMITGEWKGEDKLPSVREMGVKLAVNP-NTVS----RAYQELERA 64 (125)
T ss_dssp HHHHHHHHHHHHTTSSCTTCBCCCHHHHHHHHTCCH-HHHH----HHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHCcCH-HHHH----HHHHHHHHC
Confidence 5789999999999999887 5899999998744432 3343 234555543
No 45
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=45.73 E-value=41 Score=29.36 Aligned_cols=25 Identities=32% Similarity=0.461 Sum_probs=20.5
Q ss_pred EEEEeCCe-eEEEEEEECCeeecCCCC
Q 015154 371 TVLWLYPG-TYEIKFIVDGQWKVDPQR 396 (412)
Q Consensus 371 ~tL~LPPG-~YEYKFIVDGeW~~DPd~ 396 (412)
.++.|..| .|.|+| ++|.|+.+-+.
T Consensus 98 ~svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 98 RKVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred cEEEecCCCEEEEEE-cCCEEEEcccc
Confidence 34678899 899999 99999987654
No 46
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=44.22 E-value=18 Score=35.90 Aligned_cols=53 Identities=15% Similarity=0.322 Sum_probs=36.4
Q ss_pred CceEEEEeeeCCCccc-------cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeecCC
Q 015154 331 GEIVEVAGSFNGWHHR-------IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKVDP 394 (412)
Q Consensus 331 AkeV~LaGSFNNW~~~-------IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~DP 394 (412)
...++|+|++++|.-. .+|.+. ....+.|.....+.-| .+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPV----------NGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEEC----------TTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccc----------cCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 5679999999887531 123221 1357888888877644 589999998886543
No 47
>3ic7_A Putative transcriptional regulator; helix-turn-helix, structural genomics, PSI-2, protein struct initiative; 2.82A {Bacteroides thetaiotaomicron}
Probab=37.74 E-value=13 Score=30.87 Aligned_cols=31 Identities=13% Similarity=0.168 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcCCCCCC-CCChHHHhhhc
Q 015154 62 EELYNDLREFLSTVGLSESH-VPSMKELSAHG 92 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~~-vps~kels~hg 92 (412)
..+++.|++.|.+-.||+|. +||.+||+++=
T Consensus 14 ~~i~~~l~~~I~~g~~~~G~~lPs~~~La~~~ 45 (126)
T 3ic7_A 14 LQIADRICDDILLGQYEEEGRIPSVREYASIV 45 (126)
T ss_dssp THHHHHHHHHHHTTSSCBTSEECCTTTTTTCC
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcCHHHHHHHH
Confidence 57999999999999999886 79999999863
No 48
>2ek5_A Predicted transcriptional regulators; helix-turn-helix, interwined alpha helices; 2.20A {Corynebacterium glutamicum atcc 13032} PDB: 2du9_A
Probab=34.25 E-value=35 Score=28.44 Aligned_cols=31 Identities=26% Similarity=0.308 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHhhhc
Q 015154 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHG 92 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~-~vps~kels~hg 92 (412)
..+++.|++.|-+-.|++| .+||.+||++.=
T Consensus 7 ~~i~~~i~~~I~~g~l~~G~~LPse~~La~~~ 38 (129)
T 2ek5_A 7 KQIASLIEDSIVDGTLSIDQRVPSTNELAAFH 38 (129)
T ss_dssp HHHHHHHHHHHHTTSSCTTSCBCCHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCCCcCcCHHHHHHHH
Confidence 5788999999999999887 589999999863
No 49
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=31.85 E-value=60 Score=27.11 Aligned_cols=68 Identities=16% Similarity=0.216 Sum_probs=42.1
Q ss_pred EEEEEEecC--CceEEEEee--eCCCcc-ccccCCCCCCCccccccccCCCcEEEEEEeCCe-eEEEEEEECCe--eecC
Q 015154 322 VVEIQYSGD--GEIVEVAGS--FNGWHH-RIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPG-TYEIKFIVDGQ--WKVD 393 (412)
Q Consensus 322 ~VTFtW~g~--AkeV~LaGS--FNNW~~-~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG-~YEYKFIVDGe--W~~D 393 (412)
.-++....- .+.|.|.=+ |++|.. .....-.. . ...+...-..|...+.||+- .+-.+|.|+|. |-.+
T Consensus 22 ~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y---~-~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~eyWDNN 97 (106)
T 2djm_A 22 SGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASF---S-GPISGSNYEYWTFSASVKGIKEFYIKYEVSGKTYYDNN 97 (106)
T ss_dssp EEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEE---E-EECTTSSCEEEEEEECCSSEEEEEEEEEESSCEEEECS
T ss_pred EEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEE---e-cCCCCCCeEEEEEEEECCCCeEEEEEEEECCcEEEcCC
Confidence 334444432 688888888 999987 43221100 0 00112344579999999866 68889999996 5443
No 50
>2d3d_A VTS1 protein; RNA binding, SAM domain, SRE hairpin binding, RNA binding protein; 1.60A {Saccharomyces cerevisiae} PDB: 2f8k_A 2fe9_A
Probab=31.48 E-value=37 Score=27.83 Aligned_cols=54 Identities=17% Similarity=0.215 Sum_probs=43.7
Q ss_pred cCcHHHHHHHHHHHHhcCCCCC-----CCCChHHHhhhchhhHHH------HHHhhhHHHHHHHHh
Q 015154 59 KSNEELYNDLREFLSTVGLSES-----HVPSMKELSAHGRDDLAN------IVRRRGYKFIRQLLK 113 (412)
Q Consensus 59 k~~~~l~~d~~ef~s~~~l~~~-----~vps~kels~hgr~dlan------~vrrrgyk~i~~l~~ 113 (412)
-.|..+.+|+.+|+.+.+|-.| .+ ++.+|..-.-.||-+ --||+-.+-|.+|..
T Consensus 12 ~~d~~~~~~V~~WL~sLrLhKY~~~F~~~-~~~~l~~LtdedL~~~GVta~GaRrKil~aI~~lr~ 76 (88)
T 2d3d_A 12 LTDPKLLKNIPMWLKSLRLHKYSDALSGT-PWIELIYLDDETLEKKGVLALGARRKLLKAFGIVID 76 (88)
T ss_dssp HTCHHHHTCHHHHHHHTTCGGGHHHHTTS-CHHHHTTCCHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred ccCccccccHHHHHHHcccchhHHHHhcC-CHHHHHHcCHHHHHHcCCccHhHHHHHHHHHHHHHH
Confidence 4788999999999999999877 23 777777777777754 468888999988875
No 51
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=30.85 E-value=31 Score=33.06 Aligned_cols=51 Identities=12% Similarity=0.079 Sum_probs=37.1
Q ss_pred CceEEEEeeeCCCc--cccccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCeeec
Q 015154 331 GEIVEVAGSFNGWH--HRIKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQWKV 392 (412)
Q Consensus 331 AkeV~LaGSFNNW~--~~IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW~~ 392 (412)
...++|+|++.+|. ...+|.+.. ...|.|.....|+.| .+|||.-+..|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~----------~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVY----------GMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECT----------TSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeecc----------CCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 57899999998664 334565532 357899999999766 6799988766543
No 52
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=30.40 E-value=87 Score=26.31 Aligned_cols=64 Identities=17% Similarity=0.292 Sum_probs=49.1
Q ss_pred chhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchHHHHHHHhh
Q 015154 253 NQLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 316 (412)
Q Consensus 253 ~~~e~~~l~~m~~qkele~~~~k~q~e~~K~aLa~l~~k~~~~i~~Aq~ll~eK~~~LdaAe~a 316 (412)
...||.+++..+..-+.|+.-++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 97 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQD 97 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3567888888888777777777777666667788888888888889988888877777666554
No 53
>3edp_A LIN2111 protein; APC88337, listeria innocua CLIP11262, structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.09A {Listeria innocua}
Probab=29.10 E-value=42 Score=30.42 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHhhhc
Q 015154 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHG 92 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~-~vps~kels~hg 92 (412)
+.++++|++-|.+-.+|+| .+||.+||++.=
T Consensus 12 ~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~ 43 (236)
T 3edp_A 12 EVIASKIKDSINRDEYKTGMLMPNETALQEIY 43 (236)
T ss_dssp HHHHHHHHHHHHTTSSCCCC--CCHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHH
Confidence 5789999999999899887 689999999864
No 54
>2eap_A Lymphocyte cytosolic protein 2; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.02 E-value=30 Score=28.75 Aligned_cols=37 Identities=24% Similarity=0.336 Sum_probs=31.5
Q ss_pred cCCCCCCCCChHHHhhhchhhHHHHHHhhhHHHHHHHH
Q 015154 75 VGLSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQLL 112 (412)
Q Consensus 75 ~~l~~~~vps~kels~hgr~dlan~vrrrgyk~i~~l~ 112 (412)
-|..=..||+|+|--.=...|+|.-.|++||+=+ +++
T Consensus 6 ~~m~~~~~ps~seV~~Wsp~~VadWLkk~g~~~c-d~l 42 (90)
T 2eap_A 6 SGMALRNVPFRSEVLGWDPDSLADYFKKLNYKDC-EKA 42 (90)
T ss_dssp CCSSTTCCCCHHHHTTCCTTTHHHHHHHTTCHHH-HHH
T ss_pred ccccccccccCccccccCHHHHHHHHHHcCCchH-HHH
Confidence 4666678999999999999999999999999763 444
No 55
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=27.95 E-value=16 Score=28.43 Aligned_cols=14 Identities=36% Similarity=0.847 Sum_probs=11.4
Q ss_pred ECCeeecCCCCCcc
Q 015154 386 VDGQWKVDPQRESV 399 (412)
Q Consensus 386 VDGeW~~DPd~PtV 399 (412)
|||+|.+||.-.+.
T Consensus 48 vdgeWsYD~ATkTF 61 (65)
T 1mhx_A 48 VDGEWTYDDAAKTF 61 (65)
T ss_dssp CCSEEEEETTTTEE
T ss_pred CccEEEecCceeEE
Confidence 68999999987653
No 56
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=27.71 E-value=1.2e+02 Score=24.81 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=28.0
Q ss_pred hhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015154 255 LEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAV 293 (412)
Q Consensus 255 ~e~~~l~~m~~qkele~~~~k~q~e~~K~aLa~l~~k~~ 293 (412)
-||++|++=+.--|-|-.|-...+--||+.|+.||...+
T Consensus 26 qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe 64 (81)
T 3qh9_A 26 QELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVA 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 478888877665555666667778888988888765543
No 57
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=27.68 E-value=34 Score=30.76 Aligned_cols=49 Identities=18% Similarity=0.270 Sum_probs=33.5
Q ss_pred ceEEEEeee--CCCccc--cccCCCCCCCccccccccCCCcEEEEEEeCCeeEEEEEEECCee
Q 015154 332 EIVEVAGSF--NGWHHR--IKMDPLPSSSIIEPIRSRKSRLWSTVLWLYPGTYEIKFIVDGQW 390 (412)
Q Consensus 332 keV~LaGSF--NNW~~~--IpM~kd~ss~~~a~~~sk~~G~Fs~tL~LPPG~YEYKFIVDGeW 390 (412)
..|+|.|+- ++|... .+|... ....+.|.....|..|...++|.++..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~----------~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVP----------ATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCC----------SSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeec----------cCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 469999984 688754 345432 1367788888899999877666555444
No 58
>2wv0_A YVOA, HTH-type transcriptional repressor YVOA; DNA-binding, transcription regulation, transcriptional regulator, GNTR/HUTC family; 2.40A {Bacillus subtilis}
Probab=27.49 E-value=48 Score=30.10 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=28.2
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCChHHHhhhchh
Q 015154 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (412)
Q Consensus 61 ~~~l~~d~~ef~s~~~l~~~-~vps~kels~hgr~ 94 (412)
-..++++|++-|.+-.+++| .+||.+||+++=.+
T Consensus 12 ~~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~~v 46 (243)
T 2wv0_A 12 YYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGI 46 (243)
T ss_dssp HHHHHHHHHHHHHHTSSCTTCBCCCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHHCc
Confidence 35789999999999889887 68999999987433
No 59
>1v4r_A Transcriptional repressor; helix-turn-helix, winged-helix, gene regulation; NMR {Streptomyces} SCOP: a.4.5.6
Probab=27.42 E-value=45 Score=26.02 Aligned_cols=32 Identities=16% Similarity=0.341 Sum_probs=26.4
Q ss_pred cHHHHHHHHHHHHhcCCCCCC-CCChHHHhhhc
Q 015154 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHG 92 (412)
Q Consensus 61 ~~~l~~d~~ef~s~~~l~~~~-vps~kels~hg 92 (412)
-..+++.||..|-.-.|++|. +||.+||+++=
T Consensus 13 ~~~l~~~i~~~I~~~~l~~g~~lps~~eLa~~~ 45 (102)
T 1v4r_A 13 YADVATHFRTLIKSGELAPGDTLPSVADIRAQF 45 (102)
T ss_dssp HHHHHHHHHHHTTTTSCCTTSBCCCHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCCCCCcCCCcCHHHHHHHH
Confidence 468999999999987887665 69999999863
No 60
>3bwg_A Uncharacterized HTH-type transcriptional regulato; APC85486, YYDK, transcriptional regulator, structural genomi 2; 2.09A {Bacillus subtilis subsp} SCOP: a.4.5.6 d.190.1.2
Probab=26.90 E-value=43 Score=30.27 Aligned_cols=33 Identities=12% Similarity=0.335 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHhhhchh
Q 015154 62 EELYNDLREFLSTVGLSES-HVPSMKELSAHGRD 94 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~-~vps~kels~hgr~ 94 (412)
..++++|++.|.+-.+++| .+||.+||+++=.+
T Consensus 8 ~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~~v 41 (239)
T 3bwg_A 8 QQIATEIETYIEEHQLQQGDKLPVLETLMAQFEV 41 (239)
T ss_dssp CHHHHHHHHHHHHTTCCTTCBCCCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcCHHHHHHHHCC
Confidence 4789999999999999886 69999999987544
No 61
>3by6_A Predicted transcriptional regulator; structural genomics, PSI-2, MCSG, structure initiative, midwest center for structural genomic binding; 2.20A {Oenococcus oeni}
Probab=26.50 E-value=53 Score=27.11 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=27.6
Q ss_pred cHHHHHHHHHHHHhcCCCCCC-CCChHHHhhhc
Q 015154 61 NEELYNDLREFLSTVGLSESH-VPSMKELSAHG 92 (412)
Q Consensus 61 ~~~l~~d~~ef~s~~~l~~~~-vps~kels~hg 92 (412)
-..+++.|++-|-+-.||+|. +||.+||+++=
T Consensus 13 ~~~i~~~l~~~I~~g~~~~G~~lPse~~La~~~ 45 (126)
T 3by6_A 13 YLQLVDRIKNEVATDVLSANDQLPSVRETALQE 45 (126)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEECCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCcCcCHHHHHHHH
Confidence 367999999999999998885 69999999873
No 62
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=25.98 E-value=89 Score=26.39 Aligned_cols=63 Identities=16% Similarity=0.211 Sum_probs=42.7
Q ss_pred hhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccchHHHHHHHhh
Q 015154 254 QLEIDHLKFMLHQKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISDKDEELIAAEES 316 (412)
Q Consensus 254 ~~e~~~l~~m~~qkele~~~~k~q~e~~K~aLa~l~~k~~~~i~~Aq~ll~eK~~~LdaAe~a 316 (412)
..||..++..+..-+.|+..++.+...-..+|+-++...+.++..++..|.....+|..++..
T Consensus 37 k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~~l~~~q~~i~~lE~eL~~~r~e 99 (131)
T 3tnu_A 37 KSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCMQLAQIQEMIGSVEEQLAQLRCE 99 (131)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777777777666666666666555556777777788888888888888777777666554
No 63
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=24.35 E-value=74 Score=27.08 Aligned_cols=65 Identities=8% Similarity=0.187 Sum_probs=51.9
Q ss_pred hhhhHHHHHhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccc---c----hHHHHHHHhhCC
Q 015154 254 QLEIDHLKFMLH--QKEMELSRLKEQIEKEKLALSVLQTKAVTEINKAEKLISD---K----DEELIAAEESLS 318 (412)
Q Consensus 254 ~~e~~~l~~m~~--qkele~~~~k~q~e~~K~aLa~l~~k~~~~i~~Aq~ll~e---K----~~~LdaAe~aLs 318 (412)
+-+-+++..|-. -.+-++.+..+-+.++++++.-++.+...++.+-+.+|.+ + ..++.+|++.+.
T Consensus 32 ~~q~~kiekmk~e~~dey~iKkq~evL~Et~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~ 105 (116)
T 3mxz_A 32 EREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVA 105 (116)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHH
Confidence 345566666665 3678899999999999999999999999999999998873 1 348888888753
No 64
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=23.97 E-value=21 Score=27.70 Aligned_cols=13 Identities=38% Similarity=0.838 Sum_probs=10.4
Q ss_pred ECCeeecCCCCCc
Q 015154 386 VDGQWKVDPQRES 398 (412)
Q Consensus 386 VDGeW~~DPd~Pt 398 (412)
|||+|.+||.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5899999987665
No 65
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=22.86 E-value=16 Score=27.93 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=9.9
Q ss_pred ECCeeecCCCCCc
Q 015154 386 VDGQWKVDPQRES 398 (412)
Q Consensus 386 VDGeW~~DPd~Pt 398 (412)
|||+|.+||.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6889998886554
No 66
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile}
Probab=22.54 E-value=49 Score=26.58 Aligned_cols=34 Identities=15% Similarity=0.170 Sum_probs=29.1
Q ss_pred CCCCCCCChHHHhhhchhhHHHHHHhhhHHHHHHH
Q 015154 77 LSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQL 111 (412)
Q Consensus 77 l~~~~vps~kels~hgr~dlan~vrrrgyk~i~~l 111 (412)
+|--|++++.||+.--+.+||.+++ ..-++.+.+
T Consensus 44 iPk~H~~~l~dL~~~e~~~l~~~~~-~~~~~~~~~ 77 (119)
T 4egu_A 44 VPKKHYDSLIDIPDKEMDIVSHIHV-VINKIAKEK 77 (119)
T ss_dssp EESSCCSSGGGSCGGGTHHHHHHHH-HHHHHHHHH
T ss_pred EechhhCCHhHCCHhHHHHHHHHHH-HHHHHHHHh
Confidence 5788999999999988999999997 677777765
No 67
>2di3_A Bacterial regulatory proteins, GNTR family; helix-turn-helix, transcription; 2.05A {Corynebacterium glutamicum}
Probab=21.01 E-value=77 Score=28.12 Aligned_cols=30 Identities=30% Similarity=0.343 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCCCCC-CCCChHHHhhh
Q 015154 62 EELYNDLREFLSTVGLSES-HVPSMKELSAH 91 (412)
Q Consensus 62 ~~l~~d~~ef~s~~~l~~~-~vps~kels~h 91 (412)
+.++..|++.|-+-.|+|| .+||-+||++.
T Consensus 7 ~~v~~~L~~~I~~g~l~pG~~LpsE~~La~~ 37 (239)
T 2di3_A 7 ESVMDWVTEELRSGRLKIGDHLPSERALSET 37 (239)
T ss_dssp HHHHHHHHHHHHHTSSCTTCBCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCcCCCHHHHHHH
Confidence 5688999999999999999 68999999875
No 68
>3eet_A Putative GNTR-family transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 1.97A {Streptomyces avermitilis}
Probab=20.72 E-value=76 Score=29.46 Aligned_cols=32 Identities=19% Similarity=0.213 Sum_probs=27.8
Q ss_pred cHHHHHHHHHHHHhcCCCCC-CCCChHHHhhhc
Q 015154 61 NEELYNDLREFLSTVGLSES-HVPSMKELSAHG 92 (412)
Q Consensus 61 ~~~l~~d~~ef~s~~~l~~~-~vps~kels~hg 92 (412)
-..++++|++-|.+-.+++| .+||.+||++.=
T Consensus 31 ~~~i~~~l~~~I~~g~~~~g~~lPse~~La~~~ 63 (272)
T 3eet_A 31 YLRVAGDLRKKIVDGSLPPHTRLPSQARIREEY 63 (272)
T ss_dssp HHHHHHHHHHHHHHTSSCTTSBCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCCcCCCcCHHHHHHHH
Confidence 46799999999999999887 689999999863
No 69
>1x2l_A CUT-like 2, homeobox protein CUX-2; CUT domain, human homeobox protein CUX-2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.35.1.7
Probab=20.46 E-value=1.4e+02 Score=24.88 Aligned_cols=54 Identities=9% Similarity=0.116 Sum_probs=41.9
Q ss_pred CCCCcccccccCcHHHHHHHHHHHHhcCCCCCCCCChHHHhhhchhhHHHHHHhhhHHHHHHHHhCCC
Q 015154 49 SSSSRSSRKVKSNEELYNDLREFLSTVGLSESHVPSMKELSAHGRDDLANIVRRRGYKFIRQLLKSST 116 (412)
Q Consensus 49 ~~~~r~~~~~k~~~~l~~d~~ef~s~~~l~~~~vps~kels~hgr~dlan~vrrrgyk~i~~l~~~~~ 116 (412)
...|-..--+=+-.++|++|+|++...+++|. -.|..|=.|.=..+++||.++-
T Consensus 7 ~~~p~~~~~~ldTk~I~~~ike~L~~~~isQ~--------------~FA~~VLgrsQgtlS~lL~~Pk 60 (101)
T 1x2l_A 7 GAGPGAEEEQLDTAEIAFQVKEQLLKHNIGQR--------------VFGHYVLGLSQGSVSEILARPK 60 (101)
T ss_dssp CCCCCCCCCCCCHHHHHHHHHHHHHHTTCCHH--------------HHHHHTTCSCHHHHHHHHHCCC
T ss_pred cCCCCCCcCccCHHHHHHHHHHHHHHcCCCHH--------------HHHHHHHccccchHHHHhcCCC
Confidence 34445555566889999999999999988763 4677777777778999999976
Done!