Query 015155
Match_columns 412
No_of_seqs 217 out of 1029
Neff 5.2
Searched_HMMs 46136
Date Fri Mar 29 03:37:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015155.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015155hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03191 Type I inositol-1,4,5 100.0 1.9E-91 4.1E-96 733.0 28.5 334 55-393 255-620 (621)
2 KOG0566 Inositol-1,4,5-triphos 100.0 1.1E-70 2.3E-75 589.6 19.7 314 53-381 492-845 (1080)
3 smart00128 IPPc Inositol polyp 100.0 4.2E-64 9.2E-69 498.4 21.9 226 139-373 79-310 (310)
4 COG5411 Phosphatidylinositol 5 100.0 6.3E-54 1.4E-58 434.3 14.4 231 136-377 103-336 (460)
5 PTZ00312 inositol-1,4,5-tripho 100.0 3.1E-32 6.7E-37 265.6 11.2 174 182-365 64-356 (356)
6 KOG0565 Inositol polyphosphate 99.9 2E-27 4.4E-32 211.1 11.5 142 141-283 2-145 (145)
7 KOG1976 Inositol polyphosphate 99.8 9.4E-21 2E-25 185.7 4.6 171 183-367 154-388 (391)
8 TIGR03395 sphingomy sphingomye 98.6 1.1E-06 2.4E-11 87.0 14.3 96 152-259 90-189 (283)
9 PRK05421 hypothetical protein; 98.5 1.5E-06 3.2E-11 84.6 12.9 127 186-368 135-262 (263)
10 PF03372 Exo_endo_phos: Endonu 98.3 2.3E-07 4.9E-12 83.8 0.5 98 151-264 72-173 (249)
11 COG3568 ElsH Metal-dependent h 98.0 3.2E-05 7E-10 76.1 10.0 55 186-257 119-174 (259)
12 PRK11756 exonuclease III; Prov 97.7 0.00022 4.8E-09 69.0 9.3 65 185-259 88-155 (268)
13 PTZ00297 pantothenate kinase; 97.5 0.00069 1.5E-08 80.4 12.3 70 183-258 130-206 (1452)
14 TIGR00633 xth exodeoxyribonucl 97.4 0.0011 2.5E-08 62.6 10.6 53 198-260 100-154 (255)
15 PLN03144 Carbon catabolite rep 96.5 0.0088 1.9E-07 65.5 8.7 63 198-275 417-480 (606)
16 KOG3873 Sphingomyelinase famil 96.3 0.03 6.5E-07 57.7 10.3 221 124-369 50-294 (422)
17 TIGR00195 exoDNase_III exodeox 96.1 0.036 7.8E-07 53.1 9.7 52 199-260 98-151 (254)
18 smart00476 DNaseIc deoxyribonu 96.0 0.039 8.4E-07 55.0 9.6 104 138-258 76-187 (276)
19 COG3021 Uncharacterized protei 95.8 0.045 9.7E-07 55.4 8.9 133 184-367 173-307 (309)
20 PRK13911 exodeoxyribonuclease 95.6 0.2 4.3E-06 48.9 12.4 33 333-365 215-249 (250)
21 PRK15251 cytolethal distending 95.3 0.059 1.3E-06 53.7 7.7 56 184-258 140-195 (271)
22 PF14529 Exo_endo_phos_2: Endo 95.2 0.028 6.1E-07 46.7 4.5 33 330-362 86-119 (119)
23 KOG2756 Predicted Mg2+-depende 93.2 0.34 7.3E-06 48.6 7.8 64 188-261 194-257 (349)
24 KOG2338 Transcriptional effect 86.2 1.5 3.3E-05 47.0 6.2 93 156-258 205-303 (495)
25 KOG3870 Uncharacterized conser 26.3 28 0.0006 36.9 0.7 15 245-259 350-364 (434)
26 PRK10947 global DNA-binding tr 21.3 56 0.0012 29.5 1.6 25 305-334 93-120 (135)
No 1
>PLN03191 Type I inositol-1,4,5-trisphosphate 5-phosphatase 2; Provisional
Probab=100.00 E-value=1.9e-91 Score=732.96 Aligned_cols=334 Identities=50% Similarity=0.900 Sum_probs=297.4
Q ss_pred cccccccccccccccccccCCCCcccchhhhhhcCCCchhhhcccccccccccc--------------------cccccc
Q 015155 55 QYNGRLTKMLSGSERIGLSWPEPPLNLLTQKVLERPNSLKTVKSFKTSNSFRRY--------------------SSFKPA 114 (412)
Q Consensus 55 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~--------------------~~~~~~ 114 (412)
.++++|+|+||.+|||||.||||||+|++|++..+.+|+++ +.++|..+ .++.++
T Consensus 255 ~~~~~l~r~~s~~~r~~~~~~e~p~~~~~~~~~~~~~~~~~-----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (621)
T PLN03191 255 SSNSKLRRVFSSSARLGFKWPENPSLFSPQRFALNARGLKR-----SHRSFGNLGLSWNEIKQRSEVPEVPEVIDSLSDV 329 (621)
T ss_pred cccccceeeeccccccccCCCCCccccCchhhcccccccch-----hhhccccccccccchhhccccccccccccccccc
Confidence 46789999999999999999999999999999777665544 22333322 234444
Q ss_pred ccc-cchHHHHHHHhhH----HHH--HhccCCCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCee
Q 015155 115 VDD-MSSELALLAEIDI----ETL--MKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKG 187 (412)
Q Consensus 115 ~~~-~~~~~~~~~~~~~----~~~--~~~~~~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKG 187 (412)
.++ ..++.+++++++. +.. ...+...+|++|.|+||+||+|+||||+++.++|++|++++|+||+||++||||
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~YvkV~S~qLvGl~L~VFvk~~l~~~Is~V~~s~V~tGl~G~~GNKG 409 (621)
T PLN03191 330 SDRSSEAEDDTFKEVPSYQLPEDLIKDCRKVKQKYVRIVSKQMVGIYVSVWVRKRLRRHINNLKVSPVGVGLMGYMGNKG 409 (621)
T ss_pred ccccCCCcccccccCChhhhhhHHHHhhccCCCCEEEEEEEeeeeEEEEEEEehhhhhhcccceeeeEeeccccccccce
Confidence 433 3344667777766 444 456688999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCChHHH
Q 015155 188 SVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKT 267 (412)
Q Consensus 188 aV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~~~v 267 (412)
||+|+|.+++++||||||||+||+++++.++||+|+.+|++++.|.+..+...|..|.+||+|||||||||||+++++++
T Consensus 410 AVaIr~~l~~Ts~cFVn~HLAAg~~~~~~~rRN~D~~~I~~~l~F~~~~~~~~~~~I~dhD~vFWlGDLNYRIdl~~~ev 489 (621)
T PLN03191 410 SVSISMSLFQSRLCFVCSHLTSGHKDGAEQRRNADVYEIIRRTRFSSVLDTDQPQTIPSHDQIFWFGDLNYRLNMLDTEV 489 (621)
T ss_pred eEEEEEEEcCcEEEEEEeccccccccchHHHHHHHHHHHHhccccCcccccCCCccccccceEEEecCccccccCCHHHH
Confidence 99999999999999999999999988878899999999999999976545556788999999999999999999999999
Q ss_pred HHHHhhhcHHHHHhhhHHHHHHHcCCCcccccccCcccCCCccccCCCccccCC--CCCCCCCCCccccceeecCCCeeE
Q 015155 268 RELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGE--DPKVGRRNPSWCDRILSYGKGMRL 345 (412)
Q Consensus 268 ~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~I~FpPTYKy~~gs~~Y~~~--d~~~k~R~PSWcDRIL~~~~~i~~ 345 (412)
+++|.+++|++||++|||+.++++|++|.||.|++|+|||||||++|++.|++. +++.++|+|||||||||+++++++
T Consensus 490 ~~lI~~~~~~~LL~~DQL~~e~~~g~vF~GF~Eg~I~FpPTYKYd~gSd~Ydg~~~~Ts~KkR~PSWCDRILykg~~i~~ 569 (621)
T PLN03191 490 RKLVAQKRWDELINSDQLIKELRSGHVFDGWKEGPIKFPPTYKYEINSDRYVGENPKEGEKKRSPAWCDRILWLGKGIKQ 569 (621)
T ss_pred HHHHhhccHHHHHHHhHHHHHHHcCCccCCcccCCccCCCCcccccCCccccccccccccCccccchhheEeecCCCceE
Confidence 999999999999999999999999999999999999999999999999999853 356789999999999999999999
Q ss_pred eeeeccccccCCCCcceeEEEEEEEeeChhhhhhhccchhhh---hhchhh
Q 015155 346 LNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRALTLTDAE---IENEDV 393 (412)
Q Consensus 346 l~Y~s~el~~SDHrPV~A~f~v~v~v~~~~kl~r~l~~~~~e---~~~~~~ 393 (412)
+.|.+.++++||||||+|.|.++|++++++|+||++++++|| +|++.+
T Consensus 570 l~Y~s~ei~~SDHRPV~A~F~v~V~~id~~k~q~~~~~~~a~~~~~~~~~~ 620 (621)
T PLN03191 570 LCYKRSEIRLSDHRPVSSMFLVEVEVFDHRKLQRALNVNSAAASAVHPEPS 620 (621)
T ss_pred eEeccCCcccCCchhcceEEEEEEEecCHHHHHhhhhcchhhhhccCCccC
Confidence 999999999999999999999999999999999999999999 888754
No 2
>KOG0566 consensus Inositol-1,4,5-triphosphate 5-phosphatase (synaptojanin), INP51/INP52/INP53 family [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-70 Score=589.63 Aligned_cols=314 Identities=34% Similarity=0.568 Sum_probs=260.7
Q ss_pred ccccccccccccc-ccccccccCCCCcccchhhhhhcCC---Cchhhhcccccccc-------cc-----ccc------c
Q 015155 53 AVQYNGRLTKMLS-GSERIGLSWPEPPLNLLTQKVLERP---NSLKTVKSFKTSNS-------FR-----RYS------S 110 (412)
Q Consensus 53 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~~~~~~~~~~-------~~-----~~~------~ 110 (412)
+++..+.|...|+ .+.++-|..|..++.+-..+ +|. +..++++-|..+.- ++ |.. .
T Consensus 492 kQeaIdlLLg~l~~~q~~v~L~dpv~~yv~~~L~--er~~eyt~~k~i~IfvgTfNvNG~s~~~k~~L~~WLfp~s~~~~ 569 (1080)
T KOG0566|consen 492 KQEAIDLLLGRLPSAQSAVILYDPVHEYVLKELR--ERRSEYTEPKDISIFVGTFNVNGRSAAFKDDLSDWLFPISRGKE 569 (1080)
T ss_pred hHHHHHHHHhcCccccchhhhcCchhHHHHHHHH--HhhhhhccccceEEEEEeeeccCccccchhhHHhhccccccCCc
Confidence 3345588888888 58889999997777654333 443 45566655554321 11 111 1
Q ss_pred cc-ccc--cccchHHHH---------------HHHhhHHHHHhccCCCCeEEEEeeehheeeeeeeEecccccccceeeE
Q 015155 111 FK-PAV--DDMSSELAL---------------LAEIDIETLMKRKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRV 172 (412)
Q Consensus 111 ~~-~~~--~~~~~~~~~---------------~~~~~~~~~~~~~~~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~ 172 (412)
++ .++ -++.+-++| |++...+.+.. ....|+++.|.||||++|.+|+|.+..++|++|..
T Consensus 570 ~~~aDIyviG~eEvVeLnag~iv~As~tk~~~Wee~i~~~Ln~--~~~kYvlL~s~QlvGv~L~iF~r~~~~p~Ik~V~~ 647 (1080)
T KOG0566|consen 570 FSPADIYVIGFEEVVELNAGNIVSASTTKRRFWEEKILKTLNR--YKNKYVLLRSEQLVGVCLLLFIRPDHAPYIKDVAG 647 (1080)
T ss_pred CCcCcEEEEeehhhhhcCccceeccChHHHHHHHHHHHHHhcC--CCCceEEEehhhhheeeEEEEEcccccchhhhccc
Confidence 11 000 122222222 23222222221 16899999999999999999999999999999999
Q ss_pred eEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEE
Q 015155 173 STVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIW 252 (412)
Q Consensus 173 ~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw 252 (412)
++++||++|..||||||+|||.++.|+|||||+|||||+.+. ++||.||.+|.++++|. +.+.|.+||+|||
T Consensus 648 ~tkKTGfGG~tgNKGAVAIrf~~~~TsfCFv~SHlAAG~snv--~ERn~DY~tI~r~l~Fp------~Gr~I~~HD~ifW 719 (1080)
T KOG0566|consen 648 DTKKTGFGGATGNKGAVAIRFVYHATSFCFVCSHLAAGQSNV--EERNEDYKTIARKLRFP------RGRMIFSHDYIFW 719 (1080)
T ss_pred ceeecccccccCCCceEEEEEEeccccEEEEecccccccchH--hhhhhhHHHHHHhcccc------CCccccCCceEEE
Confidence 999999999999999999999999999999999999999875 68999999999999995 3467899999999
Q ss_pred eCccCcccCCChHHHHHHHhhhcHHHHHhhhHHHHHHHcCCCcccccccCcccCCCccccCCCccccCCCCCCCCCCCcc
Q 015155 253 LGDLNYRINLPYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSW 332 (412)
Q Consensus 253 ~GDLNyRI~l~~~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSW 332 (412)
+|||||||++++++|+++|.+++|+.|+++|||++|+.+|.+|.||.|++|+|+||||||.||++|| +++|+|+|||
T Consensus 720 ~GDFNYRI~l~nEEVr~~v~~~d~~kL~e~DQL~~q~~~G~vF~gF~E~~ltF~PTYKyD~gTd~YD---TSeK~R~PAW 796 (1080)
T KOG0566|consen 720 LGDFNYRIDLSNEEVRRLVRNQDLDKLLEYDQLTQQMNAGQVFPGFHEGQLTFPPTYKYDPGTDDYD---TSEKCRTPAW 796 (1080)
T ss_pred ecccceeecCCHHHHHHHHHhccHHHHhhHHHHHHHHhcCcccccccccccccCCcccccCCCCccc---cchhccCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999996 6789999999
Q ss_pred ccceeecCCCeeEeeeeccccccCCCCcceeEEEEEEEeeChhhhhhhc
Q 015155 333 CDRILSYGKGMRLLNYRRNEIKMSDHRPVTATYMAEVEVFSPRKLQRAL 381 (412)
Q Consensus 333 cDRIL~~~~~i~~l~Y~s~el~~SDHrPV~A~f~v~v~v~~~~kl~r~l 381 (412)
||||||++....+++|.+.++++||||||+|+|.++|..+|.+|..+.+
T Consensus 797 TDRIL~r~e~~~~l~Y~~~el~~SDHRPV~A~~~a~i~~Vd~~kk~~l~ 845 (1080)
T KOG0566|consen 797 TDRILWRGEKLELLSYKRAELKTSDHRPVYAIFRAEIFEVDEQKKLRLF 845 (1080)
T ss_pred hhhheeccccccccccccccccccCCCceEEEEEEEEEEEcHHHHHHHH
Confidence 9999999988899999999999999999999999999999988876543
No 3
>smart00128 IPPc Inositol polyphosphate phosphatase, catalytic domain homologues. Mg(2+)-dependent/Li(+)-sensitive enzymes.
Probab=100.00 E-value=4.2e-64 Score=498.39 Aligned_cols=226 Identities=38% Similarity=0.689 Sum_probs=206.3
Q ss_pred CCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhH
Q 015155 139 RSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELK 218 (412)
Q Consensus 139 ~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~ 218 (412)
+..|+++.+.+|+||.|+||+|+++.++|+++.++++++|++|.+||||||+++|.+.+++||||||||+||+++ .++
T Consensus 79 ~~~Y~~v~~~~l~gi~l~vf~~~~~~~~i~~v~~~~v~~G~~~~~~nKG~v~i~~~~~~~~~~fv~~HL~a~~~~--~~~ 156 (310)
T smart00128 79 DGQYNVLAKVRLVGILVLVFVKANHLVYIKDVETFTVKTGMGGLWGNKGAVAVRFKLSDTSFCFVNSHLAAGASN--VEQ 156 (310)
T ss_pred CCceEEEeeeeecceEEEEEEehhhcCccceeEeeeeeccccceeecCceEEEEEEEcCcEEEEEeeccccccch--hhh
Confidence 489999999999999999999999999999999999999999999999999999999999999999999999875 579
Q ss_pred HhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCCh-HHHHHHHhhhcHHHHHhhhHHHHHHHcCCCccc
Q 015155 219 RNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPY-EKTRELISKKQWSKLAESDQLLRELRKGRAFDG 297 (412)
Q Consensus 219 Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~-~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~g 297 (412)
||+|+.+|++.+.|.... ...+.+|||+||||||||||++++ +++++++++++|.+|+++|||+.+++++.+|.|
T Consensus 157 R~~~~~~I~~~~~f~~~~----~~~~~~~d~~f~~GDlNyRi~~~~~~~v~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~~ 232 (310)
T smart00128 157 RNQDYKTILRALSFPERA----ELSQFDHDVVFWFGDLNFRLDSPSYEEVRRKISKKEFDDLLEKDQLNRQKEAGKVFKG 232 (310)
T ss_pred hHHHHHHHHHhcCCCCCc----cccccccceEEEecCcceeecCCCHHHHHHHHhhCcHHHHhhhhhHHHHhhcccccCc
Confidence 999999999998886321 112568999999999999999988 899999999999999999999999999999999
Q ss_pred ccccCcccCCCcccc-CCCccccCCCCCCCCCCCccccceeecC--CCeeEee-eec-cccccCCCCcceeEEEEEEEee
Q 015155 298 WSEGTLIFAPTYKYE-LNSEKYYGEDPKVGRRNPSWCDRILSYG--KGMRLLN-YRR-NEIKMSDHRPVTATYMAEVEVF 372 (412)
Q Consensus 298 f~E~~I~FpPTYKy~-~gs~~Y~~~d~~~k~R~PSWcDRIL~~~--~~i~~l~-Y~s-~el~~SDHrPV~A~f~v~v~v~ 372 (412)
|.|++|+|||||||+ .|++.|+ ++.|+|+|||||||||+. ..+..+. |.+ +++.+||||||+|.|.+.+..+
T Consensus 233 f~E~~I~F~PTYK~~~~~t~~Yd---~~~k~R~PsWcDRIL~~~~~~~~~~~~~Y~s~~~~~~SDHkPV~~~f~v~~~~~ 309 (310)
T smart00128 233 FQEGPITFPPTYKYDSVGTETYD---TSEKKRVPAWCDRILYRSNGPNLIQLSEYHSGMELTTSDHKPVFATFRLKVTAV 309 (310)
T ss_pred CccCCcCCCCCeeecCCCCcccc---CcccccCcchhheehhhccCCCceecccccCCCccCCcCcccccEEEEEEEEec
Confidence 999999999999999 9999996 567899999999999995 3455554 876 7899999999999999998765
Q ss_pred C
Q 015155 373 S 373 (412)
Q Consensus 373 ~ 373 (412)
+
T Consensus 310 ~ 310 (310)
T smart00128 310 D 310 (310)
T ss_pred C
Confidence 3
No 4
>COG5411 Phosphatidylinositol 5-phosphate phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-54 Score=434.33 Aligned_cols=231 Identities=34% Similarity=0.565 Sum_probs=215.5
Q ss_pred ccCCCCeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcc
Q 015155 136 RKRRSSYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGD 215 (412)
Q Consensus 136 ~~~~~~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~ 215 (412)
....++|.++.+.||+|+.+.||.+.+-.+.+.+|..++-+||++|..+|||+|+++++...+.+|||||||+||..+
T Consensus 103 ~~~~eky~~l~s~q~~~~~~~vf~~~~~~~v~~~V~~~~~KtG~gg~s~nKGav~i~~~~~~t~~cFv~shlaag~~N-- 180 (460)
T COG5411 103 AQSDEKYSLLRSPQLGGILLRVFSLATNLPVVKPVSGTVKKTGFGGSSSNKGAVAIRFNYERTSFCFVNSHLAAGVNN-- 180 (460)
T ss_pred cccCCceEEecchhccCcceEEeeeccccceeccccccccccccceecccccccceeEEeecCCcEEEecchhccccc--
Confidence 467899999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCChHHHHHHHhhhc--HHHHHhhhHHHHHHHcCC
Q 015155 216 ELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQ--WSKLAESDQLLRELRKGR 293 (412)
Q Consensus 216 ~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~~~v~~lI~~~~--~~~Ll~~DQL~~e~~~g~ 293 (412)
.++|+.||+.|.+.++|.. ...|++||++||+|||||||++.+++++..+...+ +.+|+++|||..|+..|.
T Consensus 181 ~eeR~~Dy~~I~~~i~f~~------g~~I~~hdti~w~GDlNyRVts~~e~v~~~~~~~~g~~~~l~~~DqL~~e~~~g~ 254 (460)
T COG5411 181 IEERIFDYRSIASNICFSR------GLRIYDHDTIFWLGDLNYRVTSTNEEVRPEIASDDGRLDKLFEYDQLLWEMEVGN 254 (460)
T ss_pred HHHHHHHHHHHHHheecCC------CceecccceEEEecccCceeecCchhcchhhhCCcchhhhhhhhhhHhhhhcccc
Confidence 5789999999999999852 24688999999999999999999999998887766 888999999999999999
Q ss_pred CcccccccCcccCCCccccCCCccccCCCCCCCCCCCccccceeecCCCeeEeeeecc-ccccCCCCcceeEEEEEEEee
Q 015155 294 AFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMRLLNYRRN-EIKMSDHRPVTATYMAEVEVF 372 (412)
Q Consensus 294 ~F~gf~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~i~~l~Y~s~-el~~SDHrPV~A~f~v~v~v~ 372 (412)
+|.+|+|..|+|||||||+.|+++|+ ++.|.|+||||||||+++.....++|++. .+.+||||||+|+|.+++.+.
T Consensus 255 ~f~~f~E~~i~FpPTYKfd~gt~~yd---tsdk~RiPsWtDRIl~~s~~~~p~sY~sip~l~~SDHrPV~a~~~~~i~~~ 331 (460)
T COG5411 255 VFPGFKEPVITFPPTYKFDYGTDEYD---TSDKGRIPSWTDRILYKSEQLTPHSYSSIPHLMISDHRPVYATFRAKIKVV 331 (460)
T ss_pred cccceecccccCCCceEeecCCcccc---ccccccCCchhhhhhhhccccccccccccCceeecCCCeEEEEEecceEEe
Confidence 99999999999999999999999997 45689999999999999988889999984 499999999999999999999
Q ss_pred Chhhh
Q 015155 373 SPRKL 377 (412)
Q Consensus 373 ~~~kl 377 (412)
|+.+.
T Consensus 332 d~~~k 336 (460)
T COG5411 332 DPSKK 336 (460)
T ss_pred Ccchh
Confidence 97653
No 5
>PTZ00312 inositol-1,4,5-triphosphate 5-phosphatase; Provisional
Probab=99.97 E-value=3.1e-32 Score=265.58 Aligned_cols=174 Identities=21% Similarity=0.288 Sum_probs=130.3
Q ss_pred ccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcc---------hhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEE
Q 015155 182 FIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGD---------ELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIW 252 (412)
Q Consensus 182 ~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~---------~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw 252 (412)
.++.||.+.+|++|+++.|||||+||.+++.+.. ...|..++..|+.+ +. ..+..++++||
T Consensus 64 kwSRKGfmrtrw~i~~t~fdfVNiHLFHDaSNl~A~~tSPSiYS~~RqrAL~~iL~r--~~--------~~~~~~~~lF~ 133 (356)
T PTZ00312 64 GRSRKGFLLLSLRLGTVVVNVLNVHLYNDDDNRVAAASSPSLYTGQRQEALLEAIAE--CS--------AFISPSDPLFI 133 (356)
T ss_pred CccccceEEEEEEECCEEEEEEEeeccCCcchhhHHhcCCchhHHHHHHHHHHHHHH--Hh--------hccCCCCcEEE
Confidence 4789999999999999999999999999987753 24688899999875 22 11235689999
Q ss_pred eCccCcccCCChH-H-HH------------HHHhhhcHHHHHhhhHHHHHHHc-------------CCCcccccccCccc
Q 015155 253 LGDLNYRINLPYE-K-TR------------ELISKKQWSKLAESDQLLRELRK-------------GRAFDGWSEGTLIF 305 (412)
Q Consensus 253 ~GDLNyRI~l~~~-~-v~------------~lI~~~~~~~Ll~~DQL~~e~~~-------------g~~F~gf~E~~I~F 305 (412)
|||||||++...- + ++ ++-....|.+|+++|||.+|+++ .+.|.++.|.||+|
T Consensus 134 fGDfNyRld~~~~~e~L~ek~Ql~ve~~~g~~~~P~hf~~Lf~~dQl~rE~~~fd~e~q~l~~~va~~s~~eLaE~pI~F 213 (356)
T PTZ00312 134 FGDFNVRLDGHNLLEWLKEKMQIDVKIEVKRVRAPDRFWELFTNPQTQGEIRRFDLELQRLMDVVAQQSGVELAEFAIRF 213 (356)
T ss_pred eccceeeeccccHHHHhcccccccccccccccCChHHHHHHhcChhhhHHHhhhhhhhhhhhhhhhhhcccchhcccccC
Confidence 9999999995421 1 11 01114579999999999999995 56788999999999
Q ss_pred CCCccccCC----------------CccccCCC---------------------------------------CCCCCCCC
Q 015155 306 APTYKYELN----------------SEKYYGED---------------------------------------PKVGRRNP 330 (412)
Q Consensus 306 pPTYKy~~g----------------s~~Y~~~d---------------------------------------~~~k~R~P 330 (412)
|||||-... ...|...| .+.+.|+|
T Consensus 214 pPTYkrva~r~~~~~~~~~a~~~~~a~~~~~~d~~~~~~~~~~~~~~~~~~g~~d~i~~~~~l~~~ta~P~r~~~~~r~p 293 (356)
T PTZ00312 214 PPTYPRVAERTNTGAQIESAGANVAASVYGVKDVAAKLDNQQRKKAAKDLKGTADAILASVVLTRVTAIPHRNYCRDRLP 293 (356)
T ss_pred CCcchhhhhhcCCcchhhhcccccccchhcccccccccccccccchhhhccCccceeeeeeeeecccccCCcchhcccch
Confidence 999993221 11111100 13468999
Q ss_pred ccccceeecCCC----------------------------eeEeeeeccccccCCCCcceeEE
Q 015155 331 SWCDRILSYGKG----------------------------MRLLNYRRNEIKMSDHRPVTATY 365 (412)
Q Consensus 331 SWcDRIL~~~~~----------------------------i~~l~Y~s~el~~SDHrPV~A~f 365 (412)
||||||||...+ .....|++.++..+||.||+..|
T Consensus 294 awcdrvl~~~~~~~~~~~~r~~~a~~~~~aa~~~~~~~~~~~~~~Y~s~~L~htDH~~V~~lF 356 (356)
T PTZ00312 294 AWCDRVLWNPAGLELMTGDRSRSASPQSAAASKGDQASGQSCRYAYRSIDLIHTDHDGVFLLF 356 (356)
T ss_pred hhhheeeechhhhhhhcCccccCCCcchhhhccCCcccchhhhheeeeeeeeeccCccceecC
Confidence 999999997431 12346888999999999999765
No 6
>KOG0565 consensus Inositol polyphosphate 5-phosphatase and related proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=2e-27 Score=211.13 Aligned_cols=142 Identities=47% Similarity=0.720 Sum_probs=126.6
Q ss_pred CeEEEEeeehheeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhHHh
Q 015155 141 SYVRMVSKQMVGIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRN 220 (412)
Q Consensus 141 ~Yv~v~s~qmvGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn 220 (412)
.|+.+.+.+|+|+.+.+|+++++..++.+++++++++|++|++||||+|++++.++++.+|||||||+||.++.. +.||
T Consensus 2 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~v~~g~~~~~~nkg~v~is~~~~~~~~~~v~~hl~~~~~~~~-~~r~ 80 (145)
T KOG0565|consen 2 LYVVVASGRLVGIDLSVLLRRDLLDHSFNVRVSEVGTGIMGYLGNKGGVAISFVLSQTSFCFVISHLTSGVHKVY-ERRN 80 (145)
T ss_pred cEEEEeeeEEEEEEEEEEehhhhhhhhcccEEEEecceEEEEeCCCCeEEEEEEEcCceEEEEEecccccchhhH-HHhh
Confidence 599999999999999999999999999999999999999999999999999999999999999999999998753 3399
Q ss_pred HHHHHHHHhcCCCCCCCCCCCcccCc-cceEEEeCccCcccCCC-hHHHHHHHhhhcHHHHHhhh
Q 015155 221 ADVHEIHRRTHFRSHSEIGFPKSICD-HERIIWLGDLNYRINLP-YEKTRELISKKQWSKLAESD 283 (412)
Q Consensus 221 ~d~~~I~~~~~F~~~~~~~~p~~I~d-~d~vfw~GDLNyRI~l~-~~~v~~lI~~~~~~~Ll~~D 283 (412)
+|+.+|..++.|........|..+.. ||.|||+||||||+..+ +.++...+..+.|+.|++.|
T Consensus 81 ~d~~~i~~~~~~~~~~~~~~~~~~~~~~D~v~w~GDlN~Rl~~~~~~~~~~~~~~~~~~~l~~~d 145 (145)
T KOG0565|consen 81 EDYQEILNGLRFPSVSPASEPVISDGEHDTVIWLGDLNYRLSGPSYLEVRTLISVKSRDGLLEKD 145 (145)
T ss_pred ccHHHHHhhccccccCcccccccccccccEEEEecceeeeecCcccccchhhhhhcchhhhhccC
Confidence 99999999999975444444544444 89999999999999987 78888888888888887765
No 7
>KOG1976 consensus Inositol polyphosphate 5-phosphatase, type I [Lipid transport and metabolism]
Probab=99.81 E-value=9.4e-21 Score=185.75 Aligned_cols=171 Identities=26% Similarity=0.396 Sum_probs=112.9
Q ss_pred cCCeeEEEEEEEECCEEEEEEeeccCCCCCCcc---------hhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEe
Q 015155 183 IGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGD---------ELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWL 253 (412)
Q Consensus 183 ~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~---------~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~ 253 (412)
++.||-.-.++.|++..|.|||.||-....+.. -.+|.+.+..++.++.=+ + +..+.+|+|
T Consensus 154 ~~rkg~~~~r~~I~~k~fdfVN~hLFhD~snla~~~sspt~ys~~R~~al~~vL~el~~~-----~-----~~~~~~fVf 223 (391)
T KOG1976|consen 154 NQRKGFLLARFRIHGKEFDFVNLHLFHDVSNLATKNSSPTKYSSKREQALEMVLKELDEE-----G-----LRNDAIFVF 223 (391)
T ss_pred hhhccccceeEEEcCceeeeeehhhhcchhhhhhhcCChhhhhhhHHHHHHHHHHHHHhh-----c-----cCceEEEEe
Confidence 688999999999999999999999977655422 236777777776653211 1 234679999
Q ss_pred CccCcccCCCh-----------HH--------HHHH---------------HhhhcHHHHHhhhHHHHHHH--------c
Q 015155 254 GDLNYRINLPY-----------EK--------TREL---------------ISKKQWSKLAESDQLLRELR--------K 291 (412)
Q Consensus 254 GDLNyRI~l~~-----------~~--------v~~l---------------I~~~~~~~Ll~~DQL~~e~~--------~ 291 (412)
||||||++... +. +.++ |+++.|+ -..+|-+...-+ .
T Consensus 224 GdfNfrLds~s~ln~l~a~q~~qtv~~~d~~~vv~~ifr~esd~drkv~l~vEkk~FD-yfnh~~f~d~~r~~~~~~dkE 302 (391)
T KOG1976|consen 224 GDFNFRLDSTSLLNYLAATQLVQTVAKKDEDGVVESIFRVESDGDRKVTLTVEKKRFD-YFNHDWFFDLGRGMVKRYDKE 302 (391)
T ss_pred cccccccchHHHHHHHhcCCccchhhhcccCcceeeEEeecccCCceeEEEeehhhcc-hhhhHHHHHcCchhhhhcchH
Confidence 99999998532 11 1111 1223333 222222221100 0
Q ss_pred CCCccc-ccccCcccCCCccccCCCccccCCCCCCCCCCCccccceeecCCC----------eeEeeeec--cccccCCC
Q 015155 292 GRAFDG-WSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKG----------MRLLNYRR--NEIKMSDH 358 (412)
Q Consensus 292 g~~F~g-f~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~----------i~~l~Y~s--~el~~SDH 358 (412)
-..|.. ..|..|.|||||+|..+... .++..+.|+||||||||+.... .+.+.|+. ++.++.||
T Consensus 303 l~nf~~kl~E~~i~FpPsypysed~~~---~E~~m~TrcPAWcDRILmn~~a~eLv~~~e~e~~~~~Y~~vg~e~c~GdH 379 (391)
T KOG1976|consen 303 LANFAFKLKEETIFFPPSYPYSEDDSG---KEEFMRTRCPAWCDRILMNDRANELVKHDEFEASGLYYGLVGEEKCVGDH 379 (391)
T ss_pred HHHHHHHHhheeecCCCCCCCCcCccc---hHHHHhccChHhhhhhhcCccHHHHhhccccCcccceecccccccccCCC
Confidence 012332 77999999999999865432 1123468999999999997531 23467887 78999999
Q ss_pred CcceeEEEE
Q 015155 359 RPVTATYMA 367 (412)
Q Consensus 359 rPV~A~f~v 367 (412)
|||+..+.+
T Consensus 380 KpVfl~~~i 388 (391)
T KOG1976|consen 380 KPVFLHASI 388 (391)
T ss_pred cceEEEEee
Confidence 999998865
No 8
>TIGR03395 sphingomy sphingomyelin phosphodiesterase. Members of this family are bacterial proteins that act as sphingomyelin phosphodiesterase (EC 3.1.4.12), also called sphingomyelinase. Some members of this family have been shown to act as hemolysins.
Probab=98.57 E-value=1.1e-06 Score=86.97 Aligned_cols=96 Identities=23% Similarity=0.314 Sum_probs=61.4
Q ss_pred eeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCEEEEEEeeccCCCCCC----cchhHHhHHHHHHH
Q 015155 152 GIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKD----GDELKRNADVHEIH 227 (412)
Q Consensus 152 Gi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~----~~~~~Rn~d~~~I~ 227 (412)
+--++|+.|--+...... ... .++|. ....+||.+.+++.+.+..+.++|+||.+.... .....|..++.+|.
T Consensus 90 ~~G~~iLSr~Pi~~~~~~-~f~-~~~~~-d~~~~kg~l~a~i~~~g~~~~v~~THL~~~~~~~~~~~~~~~R~~Q~~~i~ 166 (283)
T TIGR03395 90 DGGVAIVSKWPIEEKIQY-IFN-KGCGA-DNLSNKGFAYVKINKNGKKFHVIGTHLQAQDSMCSKLGPASIRANQLNEIQ 166 (283)
T ss_pred CCEEEEEECCCccccEEE-Ecc-CCCCC-ccccCCceEEEEEecCCeEEEEEEeCCCCCcccccccccHHHHHHHHHHHH
Confidence 334556666555432211 111 22232 335789999999999999999999999985321 11357999999998
Q ss_pred HhcCCCCCCCCCCCcccCccceEEEeCccCcc
Q 015155 228 RRTHFRSHSEIGFPKSICDHERIIWLGDLNYR 259 (412)
Q Consensus 228 ~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyR 259 (412)
+.+.-. ..| ..+.+|++||||..
T Consensus 167 ~~i~~~-----~~~----~~~pvIl~GDfN~~ 189 (283)
T TIGR03395 167 DFIDSK-----NIP----KDETVLIGGDLNVN 189 (283)
T ss_pred HHHhhc-----cCC----CCceEEEEeeCCCC
Confidence 753211 122 23569999999984
No 9
>PRK05421 hypothetical protein; Provisional
Probab=98.50 E-value=1.5e-06 Score=84.61 Aligned_cols=127 Identities=18% Similarity=0.243 Sum_probs=76.6
Q ss_pred eeEEEEEEEE-CCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCCCh
Q 015155 186 KGSVSVSMSI-HQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINLPY 264 (412)
Q Consensus 186 KGaV~vr~~i-~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~ 264 (412)
||++.+.+.+ .+..+.++|+||.+.... ...|.+++..|.+.+. ... ..+|++||||-.-....
T Consensus 135 r~~l~a~~~~~~g~~l~v~ntHl~~~~~~--~~~r~~q~~~l~~~~~-----~~~--------~p~Il~GDFN~~~~~~~ 199 (263)
T PRK05421 135 KSALITEYPLPNGRTLLVVNIHAINFSLG--VDVYSKQLEPIGDQIA-----HHS--------GPVILAGDFNTWSRKRM 199 (263)
T ss_pred ceeEEEEEEeCCCCEEEEEEECccccCcC--hHHHHHHHHHHHHHHH-----hCC--------CCEEEEcccccCcccch
Confidence 8999999998 556799999999875332 2468888888876421 111 24899999995111100
Q ss_pred HHHHHHHhhhcHHHHHhhhHHHHHHHcCCCcccccccCcccCCCccccCCCccccCCCCCCCCCCCccccceeecCCCee
Q 015155 265 EKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKGMR 344 (412)
Q Consensus 265 ~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~i~ 344 (412)
+. +..+. ... ++.. .+|++.-++ ..+ ..| -|+||.+ ++.
T Consensus 200 ~~---------l~~~~------~~~-------~l~~--~~~~~~~~~----~~~-------~~~----ID~I~~~--~~~ 238 (263)
T PRK05421 200 NA---------LKRFA------REL-------GLKE--VRFTDDQRR----RAF-------GRP----LDFVFYR--GLN 238 (263)
T ss_pred HH---------HHHHH------HHc-------CCCc--cCcCCcccc----ccc-------CCC----cceEEEC--CcE
Confidence 00 11111 110 1111 133332211 011 234 5999984 577
Q ss_pred EeeeeccccccCCCCcceeEEEEE
Q 015155 345 LLNYRRNEIKMSDHRPVTATYMAE 368 (412)
Q Consensus 345 ~l~Y~s~el~~SDHrPV~A~f~v~ 368 (412)
+.++...+...|||+||.|.|.++
T Consensus 239 v~~~~v~~~~~SDH~Pv~a~l~l~ 262 (263)
T PRK05421 239 VSKASVLVTRASDHNPLLVEFSLK 262 (263)
T ss_pred EEEEEcCCCCCCCccCEEEEEEec
Confidence 777777677899999999999753
No 10
>PF03372 Exo_endo_phos: Endonuclease/Exonuclease/phosphatase family Subset of Pfam family Subset of Pfam family; InterPro: IPR005135 This domain is found in a large number of proteins including magnesium dependent endonucleases and phosphatases involved in intracellular signalling []. Proteins this domain is found in include: AP endonuclease proteins (4.2.99.18 from EC), DNase I proteins (3.1.21.1 from EC), Synaptojanin an inositol-1,4,5-trisphosphate phosphatase (3.1.3.56 from EC) and Sphingomyelinase (3.1.4.12 from EC).; PDB: 2J63_A 2JC4_A 3TEB_B 3MTC_A 3N9V_B 1ZWX_A 2F1N_A 1Y21_A 1NTF_A 2IMQ_X ....
Probab=98.25 E-value=2.3e-07 Score=83.76 Aligned_cols=98 Identities=24% Similarity=0.273 Sum_probs=53.7
Q ss_pred heeeeeeeEecccccccceeeEeEEeeccc---cccCCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHH
Q 015155 151 VGIFLTIWVRRSLRRHIQNVRVSTVGVGVM---GFIGNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIH 227 (412)
Q Consensus 151 vGi~L~Vfvr~~l~~~Is~v~~~~V~tG~~---G~~GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~ 227 (412)
.+..++|+.|.++...+........+.+.. ....+++.+.+++. +..|+++|+|+.+... .|..+..++.
T Consensus 72 ~~~g~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~~~H~~~~~~-----~~~~~~~~~~ 144 (249)
T PF03372_consen 72 GGYGVAILSRSPIFSSVSYVFSLFSKPGIRIFRRSSKSKGIVPVSIN--GKPITVVNVHLPSSND-----ERQEQWRELL 144 (249)
T ss_dssp SSEEEEEEESSCCCEEEEEEEEEESSSTTCEEEEEEEEEEEEEEEEE--TEEEEEEEEETTSHHH-----HHHHHHHHHH
T ss_pred cCceEEEEEcccccccccccccccccccccccccccccccccccccc--ceEEEeeeccccccch-----hhhhhhhhhh
Confidence 356778889988654443333222222222 22455666777766 9999999999998542 3333333333
Q ss_pred HhcC-CCCCCCCCCCcccCccceEEEeCccCcccCCCh
Q 015155 228 RRTH-FRSHSEIGFPKSICDHERIIWLGDLNYRINLPY 264 (412)
Q Consensus 228 ~~~~-F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~ 264 (412)
+.+. +.. ..+ ...+|++||||.+.+...
T Consensus 145 ~~~~~~~~----~~~-----~~~~iv~GDfN~~~~~~~ 173 (249)
T PF03372_consen 145 ARIQKIYA----DNP-----NEPVIVMGDFNSRPDSRD 173 (249)
T ss_dssp HHHHHHHH----TSS-----CCEEEEEEE-SS-BSSGG
T ss_pred hhhhhccc----ccc-----cceEEEEeecccCCccch
Confidence 3211 100 000 015999999999887543
No 11
>COG3568 ElsH Metal-dependent hydrolase [General function prediction only]
Probab=98.01 E-value=3.2e-05 Score=76.09 Aligned_cols=55 Identities=18% Similarity=0.310 Sum_probs=42.9
Q ss_pred eeEEEEEEEEC-CEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccC
Q 015155 186 KGSVSVSMSIH-QTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLN 257 (412)
Q Consensus 186 KGaV~vr~~i~-~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLN 257 (412)
.|++-+.+... +..+-++|+||+=.+ +.|.+++..|++.+.+ |. ...++|+||||
T Consensus 119 Rgal~a~~~~~~g~~l~V~~~HL~l~~-----~~R~~Q~~~L~~~~~l--------~~----~~p~vl~GDFN 174 (259)
T COG3568 119 RGALLAEIELPGGKPLRVINAHLGLSE-----ESRLRQAAALLALAGL--------PA----LNPTVLMGDFN 174 (259)
T ss_pred ceeEEEEEEcCCCCEEEEEEEeccccH-----HHHHHHHHHHHhhccC--------cc----cCceEEEccCC
Confidence 79999999985 779999999999554 4699999999873222 21 12599999999
No 12
>PRK11756 exonuclease III; Provisional
Probab=97.66 E-value=0.00022 Score=68.97 Aligned_cols=65 Identities=8% Similarity=0.157 Sum_probs=38.6
Q ss_pred CeeEEEEEEEECCEEEEEEeeccCCCCCC---cchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcc
Q 015155 185 NKGSVSVSMSIHQTLFCFVCAHLTSGEKD---GDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYR 259 (412)
Q Consensus 185 NKGaV~vr~~i~~t~~~FVn~HLaA~~~~---~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyR 259 (412)
..+.+.+.+...+..+.++|+|++.+... .....|.+.+..+...+.-. .. ....+||+||||--
T Consensus 88 ~~r~l~~~i~~~~g~~~v~n~y~P~~~~~~~~~~~~~r~~~~~~l~~~l~~~--~~--------~~~pvIl~GDfN~~ 155 (268)
T PRK11756 88 QRRIIMATIPTPNGNLTVINGYFPQGESRDHPTKFPAKRQFYQDLQNYLETE--LS--------PDNPLLIMGDMNIS 155 (268)
T ss_pred cCCEEEEEEEcCCCCEEEEEEEecCCCCCCcchhHHHHHHHHHHHHHHHHHH--hc--------cCCCEEEEeecccC
Confidence 35788888887655699999999876532 11123444444444322100 00 11349999999963
No 13
>PTZ00297 pantothenate kinase; Provisional
Probab=97.51 E-value=0.00069 Score=80.39 Aligned_cols=70 Identities=16% Similarity=0.193 Sum_probs=43.3
Q ss_pred cCCeeEEEEEEEEC----C-EEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcC--CCCCCCCCCCcccCccceEEEeCc
Q 015155 183 IGNKGSVSVSMSIH----Q-TLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTH--FRSHSEIGFPKSICDHERIIWLGD 255 (412)
Q Consensus 183 ~GNKGaV~vr~~i~----~-t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~--F~~~~~~~~p~~I~d~d~vfw~GD 255 (412)
..+||.+.+.+.+. + ..+.|+|+||.+.... ..|.+++.+|.+-+. .....+ ...+.+...+|++||
T Consensus 130 ~~~RG~L~a~I~vp~~~g~~~~v~v~~tHL~~~~~~---~~R~~Q~~ql~~~i~~~i~~~~~---~~~~~~~~PvILaGD 203 (1452)
T PTZ00297 130 SVRRGCLFAEVEVPLAEGGSQRIVFFNVHLRQEDSL---PSTSSQVQETRRFVESVIANVYE---QNNDGAEIPFVIAGD 203 (1452)
T ss_pred ccccceEEEEEEccccCCCCceEEEEEeCCCCCCCc---chHHHHHHHHHHHHHHhhhhhcc---cccCCCCCCEEEEee
Confidence 35899999999985 2 5799999999987653 235566666554211 100000 001112346999999
Q ss_pred cCc
Q 015155 256 LNY 258 (412)
Q Consensus 256 LNy 258 (412)
||-
T Consensus 204 FN~ 206 (1452)
T PTZ00297 204 FNI 206 (1452)
T ss_pred CCC
Confidence 994
No 14
>TIGR00633 xth exodeoxyribonuclease III (xth). This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.43 E-value=0.0011 Score=62.55 Aligned_cols=53 Identities=15% Similarity=0.121 Sum_probs=30.2
Q ss_pred EEEEEEeeccCCCCCCc--chhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCccc
Q 015155 198 TLFCFVCAHLTSGEKDG--DELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRI 260 (412)
Q Consensus 198 t~~~FVn~HLaA~~~~~--~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI 260 (412)
..+.++|+|++++.... ....|.+.+..+.+.+. .. +.....+|++||||--.
T Consensus 100 ~~~~i~~vy~p~~~~~~~~~~~~r~~~~~~l~~~~~--~~--------~~~~~~~Il~GDFN~~~ 154 (255)
T TIGR00633 100 DGFTVVNVYVPNGGSRGLERLEYKLQFWDALFQYYE--KE--------LDAGKPVIICGDMNVAH 154 (255)
T ss_pred CCEEEEEEEccCCCCCCchhHHHHHHHHHHHHHHHH--HH--------HhcCCcEEEEeecccCC
Confidence 35789999998876322 12345555655543210 00 00123489999999754
No 15
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=96.51 E-value=0.0088 Score=65.49 Aligned_cols=63 Identities=17% Similarity=0.339 Sum_probs=43.2
Q ss_pred EEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcC-CCCCCCCCCCcccCccceEEEeCccCcccCCChHHHHHHHhhhc
Q 015155 198 TLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTH-FRSHSEIGFPKSICDHERIIWLGDLNYRINLPYEKTRELISKKQ 275 (412)
Q Consensus 198 t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~-F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l~~~~v~~lI~~~~ 275 (412)
..||++|+||..+.... ..|..+...|++.+. +.. ..+.| +|++||||. .+.+.+-+++.++.
T Consensus 417 ~~l~VaNTHL~~~p~~~--dvRl~Q~~~Ll~~l~~~~~--~~~~P--------vIlcGDFNS---~P~S~vy~lLt~G~ 480 (606)
T PLN03144 417 QLLCVANTHIHANQELK--DVKLWQVHTLLKGLEKIAA--SADIP--------MLVCGDFNS---VPGSAPHCLLATGK 480 (606)
T ss_pred cEEEEEEeeeccCCccc--hhHHHHHHHHHHHHHHHhh--cCCCc--------eEEeccCCC---CCCChhhhhhhcCC
Confidence 36999999997665432 357778887776532 110 11233 899999998 77788888887664
No 16
>KOG3873 consensus Sphingomyelinase family protein [Signal transduction mechanisms]
Probab=96.27 E-value=0.03 Score=57.74 Aligned_cols=221 Identities=19% Similarity=0.235 Sum_probs=115.9
Q ss_pred HHHHhhHHHHHh-ccCCCCeEE-EEeeehheeeeeeeEeccccccccee-----eEeEEeeccccccCCeeEEEEEEEEC
Q 015155 124 LLAEIDIETLMK-RKRRSSYVR-MVSKQMVGIFLTIWVRRSLRRHIQNV-----RVSTVGVGVMGFIGNKGSVSVSMSIH 196 (412)
Q Consensus 124 ~~~~~~~~~~~~-~~~~~~Yv~-v~s~qmvGi~L~Vfvr~~l~~~Is~v-----~~~~V~tG~~G~~GNKGaV~vr~~i~ 196 (412)
.+...|-+.+.+ ...--.|.+ ..|--| |-.|+||.|-.+..-..+. ....+-.| .+.|-||--..++.+.
T Consensus 50 vWs~eD~~~L~~~~ss~yPysh~FHSGim-GaGL~vfSK~PI~~t~~~~y~lNG~p~~i~rG--DWf~GK~Vgl~~l~~~ 126 (422)
T KOG3873|consen 50 VWSQEDFEYLQSGCSSVYPYSHYFHSGIM-GAGLCVFSKHPILETLFHRYSLNGYPHAIHRG--DWFGGKGVGLTVLLVG 126 (422)
T ss_pred HHHHHHHHHHHHhccccCchHHhhhcccc-cCceEEeecCchhhhhhhccccCCccceeeec--cccccceeEEEEEeeC
Confidence 344445555554 222233443 445555 9999999988765332221 11222222 4567899888899999
Q ss_pred CEEEEEEeeccCCCCCC---cchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccC-CChHHHH--HH
Q 015155 197 QTLFCFVCAHLTSGEKD---GDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRIN-LPYEKTR--EL 270 (412)
Q Consensus 197 ~t~~~FVn~HLaA~~~~---~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~-l~~~~v~--~l 270 (412)
+..+.+-|+||-|--.. .-+..|-.+.-++.+-++- .-...|.||..||||-+=. ++..-.. ++
T Consensus 127 g~~v~~yntHLHAeY~rq~D~YL~HR~~QAwdlaqfi~~----------t~q~~~vVI~~GDLN~~P~dl~~~ll~~a~l 196 (422)
T KOG3873|consen 127 GRMVNLYNTHLHAEYDRQNDEYLCHRVAQAWDLAQFIRA----------TRQNADVVILAGDLNMQPQDLGHKLLLSAGL 196 (422)
T ss_pred CEEeeeeehhccccccccCchhhhHHHHHHHHHHHHHHH----------HhcCCcEEEEecCCCCCccccceeeeeccch
Confidence 99999999999885322 2234566666666542111 1124588999999997532 2222111 11
Q ss_pred HhhhcHHHHHhhhHHHHHHHcCCCcccccccC--cccCCCccccCCCccccCCCCCCCCCCCccccceeecCCC--eeEe
Q 015155 271 ISKKQWSKLAESDQLLRELRKGRAFDGWSEGT--LIFAPTYKYELNSEKYYGEDPKVGRRNPSWCDRILSYGKG--MRLL 346 (412)
Q Consensus 271 I~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~--I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSWcDRIL~~~~~--i~~l 346 (412)
. .-|..+ --||.-..--+..-+++..|+. -.=.-||.- .+.+ -+|| -++| .|.||+++.. ++..
T Consensus 197 ~--daw~~~-h~~q~e~~~~r~s~~~~l~~g~tcd~~~N~y~~--aqk~--~ddp-~~~R----iDYvl~k~~~~~~~~a 264 (422)
T KOG3873|consen 197 V--DAWTSL-HLDQCESDSFRLSEDKELVEGNTCDSPLNCYTS--AQKR--EDDP-LGKR----IDYVLVKPGDCNAKIA 264 (422)
T ss_pred h--hhHhhh-chhhhcCcccccchhhhhhcCCcccCcchhhhH--HHhC--CCCc-ccee----eeEEEEcCcceEEEee
Confidence 1 122222 2233222111111233344443 011122321 0000 0111 1467 8999999743 3333
Q ss_pred eee----c---cccccCCCCcceeEEEEEE
Q 015155 347 NYR----R---NEIKMSDHRPVTATYMAEV 369 (412)
Q Consensus 347 ~Y~----s---~el~~SDHrPV~A~f~v~v 369 (412)
.|. + .+...|||--+.|++.+.-
T Consensus 265 ~~~~t~~rvP~~d~s~SDH~Al~a~L~I~~ 294 (422)
T KOG3873|consen 265 EVEFTEPRVPGEDCSYSDHEALMATLKIFK 294 (422)
T ss_pred eEEecCCCCCCCCCCccchhhheeEEEeec
Confidence 332 2 3577899999999997753
No 17
>TIGR00195 exoDNase_III exodeoxyribonuclease III. The model brings in reverse transcriptases at scores below 50, model also contains eukaryotic apurinic/apyrimidinic endonucleases which group in the same family
Probab=96.13 E-value=0.036 Score=53.11 Aligned_cols=52 Identities=12% Similarity=0.191 Sum_probs=28.5
Q ss_pred EEEEEeeccCCCCCCc--chhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCccc
Q 015155 199 LFCFVCAHLTSGEKDG--DELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRI 260 (412)
Q Consensus 199 ~~~FVn~HLaA~~~~~--~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI 260 (412)
.+.++|+|++++.... ....|.+-+..+.+.+. .... ....+|++||||-..
T Consensus 98 ~~~l~~~~~p~~~~~~~~~~~~r~~~~~~l~~~~~--~~~~--------~~~pvIi~GDfN~~~ 151 (254)
T TIGR00195 98 SFLVINGYFPNGSRDDSEKLPYKLQWLEALQNYLE--KLVD--------KDKPVLICGDMNIAP 151 (254)
T ss_pred CEEEEEEEccCCCCCCCccHHHHHHHHHHHHHHHH--HHHh--------cCCcEEEEeecccCC
Confidence 3789999999853221 12334444555443211 0000 113499999999644
No 18
>smart00476 DNaseIc deoxyribonuclease I. Deoxyribonuclease I catalyzes the endonucleolytic cleavage of double-stranded DNA. The enzyme is secreted outside the cell and also involved in apoptosis in the nucleus.
Probab=96.02 E-value=0.039 Score=55.03 Aligned_cols=104 Identities=15% Similarity=0.123 Sum_probs=55.7
Q ss_pred CCCCeEEEEeeehh----eeeeeeeEecccccccceeeEeEEeeccccccCCeeEEEEEEEECCE---EEEEEeeccCCC
Q 015155 138 RRSSYVRMVSKQMV----GIFLTIWVRRSLRRHIQNVRVSTVGVGVMGFIGNKGSVSVSMSIHQT---LFCFVCAHLTSG 210 (412)
Q Consensus 138 ~~~~Yv~v~s~qmv----Gi~L~Vfvr~~l~~~Is~v~~~~V~tG~~G~~GNKGaV~vr~~i~~t---~~~FVn~HLaA~ 210 (412)
.++.|..+.|..+. |-...++-|++....+..-......-|-.. .=.-=...++|+...+ .|.+|++|+.+.
T Consensus 76 ~~~~Y~~v~s~r~gr~~~~E~~a~~Yr~drv~v~~~~~f~d~~~~~~~-~F~ReP~~~~F~~~~~~~~~F~li~~H~~p~ 154 (276)
T smart00476 76 SPNTYSYVSSEPLGRNSYKEQYLFLYRSDLVSVLDSYLYDDGCECGND-VFSREPFVVKFSSPSTAVKEFVIVPLHTTPE 154 (276)
T ss_pred CCCCceEEecCCCCCCCCCEEEEEEEecceEEEcccceecCCCCCccc-cccccceEEEEEeCCCCCccEEEEEecCChH
Confidence 45688888877653 466777778776543333222110000000 0022356677776664 799999999985
Q ss_pred CCCcchhHHhHHHHH-HHHhcCCCCCCCCCCCcccCccceEEEeCccCc
Q 015155 211 EKDGDELKRNADVHE-IHRRTHFRSHSEIGFPKSICDHERIIWLGDLNY 258 (412)
Q Consensus 211 ~~~~~~~~Rn~d~~~-I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNy 258 (412)
.. .++...+.. +..... .. ..+-||++||||-
T Consensus 155 ~~----~~e~~aL~~v~~~~~~--~~----------~~~~villGDFNa 187 (276)
T smart00476 155 AA----VAEIDALYDVYLDVRQ--KW----------GTEDVIFMGDFNA 187 (276)
T ss_pred HH----HHHHHHHHHHHHHHHH--hh----------ccCCEEEEccCCC
Confidence 31 233433222 222110 00 1234899999998
No 19
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.79 E-value=0.045 Score=55.42 Aligned_cols=133 Identities=25% Similarity=0.344 Sum_probs=71.9
Q ss_pred CCeeEEEEEEEE-CCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccCC
Q 015155 184 GNKGSVSVSMSI-HQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRINL 262 (412)
Q Consensus 184 GNKGaV~vr~~i-~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~l 262 (412)
+-||+..+.... +++.+..+|.|.....-..+ ..| ++..++.+.+. +..-| ++++||||- .
T Consensus 173 ~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~-~~~-~ql~~l~~~i~-----~~~gp--------vIlaGDfNa---~ 234 (309)
T COG3021 173 LPKSALATAYPLPDGTELTVVALHAVNFPVGTD-PQR-AQLLELGDQIA-----GHSGP--------VILAGDFNA---P 234 (309)
T ss_pred CCccceeEEEEcCCCCEEEEEeeccccccCCcc-HHH-HHHHHHHHHHH-----cCCCC--------eEEeecCCC---c
Confidence 567777766654 56889999999985443332 345 66666655421 11123 899999997 3
Q ss_pred ChHHHHHHHhhhcHHHHHhhhHHHHHHHcCCCcccccccCcccCCCccccCCCccccCCCCCCCCCCCcc-ccceeecCC
Q 015155 263 PYEKTRELISKKQWSKLAESDQLLRELRKGRAFDGWSEGTLIFAPTYKYELNSEKYYGEDPKVGRRNPSW-CDRILSYGK 341 (412)
Q Consensus 263 ~~~~v~~lI~~~~~~~Ll~~DQL~~e~~~g~~F~gf~E~~I~FpPTYKy~~gs~~Y~~~d~~~k~R~PSW-cDRIL~~~~ 341 (412)
+-..+. ++...|...+... +.| -.| -.|-|. . ..|.+.| .|.|++++
T Consensus 235 pWS~~~-----~R~~~l~~~~~~~---~aG-----~~~--~~~~p~--------~--------~~r~~g~PIDhvf~rg- 282 (309)
T COG3021 235 PWSRTA-----KRMAALGGLRAAP---RAG-----LWE--VRFTPD--------E--------RRRAFGLPIDHVFYRG- 282 (309)
T ss_pred chhHHH-----HHHHHhcccccch---hcc-----CCc--cccCHH--------H--------HhhccCCCcceeeecC-
Confidence 322221 1112221111110 111 111 111121 1 1223444 79999998
Q ss_pred CeeEeeeeccccccCCCCcceeEEEE
Q 015155 342 GMRLLNYRRNEIKMSDHRPVTATYMA 367 (412)
Q Consensus 342 ~i~~l~Y~s~el~~SDHrPV~A~f~v 367 (412)
.....-.+.+...|||+||.+.|+.
T Consensus 283 -l~~~ka~rl~~~gSDH~PLLveF~~ 307 (309)
T COG3021 283 -LTVMKARRLPDRGSDHRPLLVEFSY 307 (309)
T ss_pred -cchhhhhhccccCCCCCceEEEEEe
Confidence 3333334455689999999999974
No 20
>PRK13911 exodeoxyribonuclease III; Provisional
Probab=95.57 E-value=0.2 Score=48.93 Aligned_cols=33 Identities=30% Similarity=0.208 Sum_probs=20.1
Q ss_pred ccceeecCCCe-eE-eeeeccccccCCCCcceeEE
Q 015155 333 CDRILSYGKGM-RL-LNYRRNEIKMSDHRPVTATY 365 (412)
Q Consensus 333 cDRIL~~~~~i-~~-l~Y~s~el~~SDHrPV~A~f 365 (412)
.|+||....-. +. ......+...|||-||.+.+
T Consensus 215 IDyilvs~~~~~~~~~~~i~~~~~~SDH~Pv~~~~ 249 (250)
T PRK13911 215 IDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLEL 249 (250)
T ss_pred EEEEEEChHHhhhEEEEEECCCCCCCCcccEEEEe
Confidence 78998764211 11 11122456689999999875
No 21
>PRK15251 cytolethal distending toxin subunit CdtB; Provisional
Probab=95.30 E-value=0.059 Score=53.72 Aligned_cols=56 Identities=20% Similarity=0.316 Sum_probs=37.8
Q ss_pred CCeeEEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCc
Q 015155 184 GNKGSVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNY 258 (412)
Q Consensus 184 GNKGaV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNy 258 (412)
.....+++++ .+ +.|.+.|+.+.... .|.+.++.|..- |.+ ..| +.-.+++||||=
T Consensus 140 ~~Rpilgi~i--~~--~~ffstH~~a~~~~----da~aiV~~I~~~--f~~----~~~-----~~pw~I~GDFNr 195 (271)
T PRK15251 140 ASRPIIGIRI--GN--DVFFSIHALANGGT----DAGAIVRAVHNF--FRP----NMR-----HINWMIAGDFNR 195 (271)
T ss_pred cccceEEEEe--cC--eEEEEeeecCCCCc----cHHHHHHHHHHH--Hhh----ccC-----CCCEEEeccCCC
Confidence 4567778876 33 78999999998432 478888888764 321 111 133899999994
No 22
>PF14529 Exo_endo_phos_2: Endonuclease-reverse transcriptase ; PDB: 2EI9_A 1WDU_B.
Probab=95.24 E-value=0.028 Score=46.70 Aligned_cols=33 Identities=27% Similarity=0.216 Sum_probs=17.4
Q ss_pred CccccceeecCCCeeE-eeeeccccccCCCCcce
Q 015155 330 PSWCDRILSYGKGMRL-LNYRRNEIKMSDHRPVT 362 (412)
Q Consensus 330 PSWcDRIL~~~~~i~~-l~Y~s~el~~SDHrPV~ 362 (412)
.+--|+||....-... ..-.......|||+||.
T Consensus 86 ~s~iD~~~~s~~~~~~~~~~~~~~~~~SDH~~I~ 119 (119)
T PF14529_consen 86 GSRIDLILTSDNLLSWCVWVISSDDSGSDHCPIT 119 (119)
T ss_dssp EE--EEEEEECCGCCCEEEEEETTSSSSSB--EE
T ss_pred CceEEEEEECChHHhcCcEEEeCCCCCCCccCCC
Confidence 4558999987542221 11122467889999985
No 23
>KOG2756 consensus Predicted Mg2+-dependent phosphodiesterase TTRAP [Signal transduction mechanisms]
Probab=93.21 E-value=0.34 Score=48.63 Aligned_cols=64 Identities=19% Similarity=0.330 Sum_probs=44.0
Q ss_pred EEEEEEEECCEEEEEEeeccCCCCCCcchhHHhHHHHHHHHhcCCCCCCCCCCCcccCccceEEEeCccCcccC
Q 015155 188 SVSVSMSIHQTLFCFVCAHLTSGEKDGDELKRNADVHEIHRRTHFRSHSEIGFPKSICDHERIIWLGDLNYRIN 261 (412)
Q Consensus 188 aV~vr~~i~~t~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~~F~~~~~~~~p~~I~d~d~vfw~GDLNyRI~ 261 (412)
-..+...|.|..+||.++||.+-.+- ..+|.+++...++++.=- -...| .-.||+.||+|.|=.
T Consensus 194 L~I~Ev~v~G~Kl~l~tsHLEStr~h--~P~r~~qF~~~~~k~~Ea---Ie~lP-----nA~ViFGGD~NlrD~ 257 (349)
T KOG2756|consen 194 LLIVEVNVSGNKLCLMTSHLESTRGH--APERMNQFKMVLKKMQEA---IESLP-----NATVIFGGDTNLRDR 257 (349)
T ss_pred eEEEEEeecCceEEEEeccccCCCCC--ChHHHHHHHHHHHHHHHH---HHhCC-----CceEEEcCcccchhh
Confidence 34566778898999999999998753 468888888766553210 00112 234899999999743
No 24
>KOG2338 consensus Transcriptional effector CCR4-related protein [Transcription]
Probab=86.17 E-value=1.5 Score=46.99 Aligned_cols=93 Identities=18% Similarity=0.128 Sum_probs=57.4
Q ss_pred eeeEecccccccce--eeEeEEeeccccccCCeeEEEEEEEECCE---EEEEEeeccCCCCCCcchhHHhHHHHHHHHhc
Q 015155 156 TIWVRRSLRRHIQN--VRVSTVGVGVMGFIGNKGSVSVSMSIHQT---LFCFVCAHLTSGEKDGDELKRNADVHEIHRRT 230 (412)
Q Consensus 156 ~Vfvr~~l~~~Is~--v~~~~V~tG~~G~~GNKGaV~vr~~i~~t---~~~FVn~HLaA~~~~~~~~~Rn~d~~~I~~~~ 230 (412)
+|+-+.++-+.+.+ |...-.+.|++..-.-++.|+.++++-+. -++..|+||--+..... .|.++..-|++.+
T Consensus 205 ai~w~~~~F~lv~~~~l~y~~~~~~l~n~~NV~lvv~l~f~~~~~~sq~ilVanTHLl~np~~~~--vrL~Q~~iiL~~~ 282 (495)
T KOG2338|consen 205 AILWHSAKFKLVNHSELNYFDSGSALANRDNVGLVVSLEFRLVDESSQGILVANTHLLFNPSRSD--VRLAQVYIILAEL 282 (495)
T ss_pred EEEEecccceecccchhhcccccchhhcccceeEEEEEEecccCcccCceEEEeeeeeecCcccc--hhhHHHHHHHHHH
Confidence 44445554444433 33334556665532235677777766654 89999999999876654 5888988888653
Q ss_pred C-CCCCCCCCCCcccCccceEEEeCccCc
Q 015155 231 H-FRSHSEIGFPKSICDHERIIWLGDLNY 258 (412)
Q Consensus 231 ~-F~~~~~~~~p~~I~d~d~vfw~GDLNy 258 (412)
. +..... .|=.+|++||||-
T Consensus 283 ~~~~~~~~--------~~~pi~l~GDfNt 303 (495)
T KOG2338|consen 283 EKMSKSSK--------SHWPIFLCGDFNT 303 (495)
T ss_pred HHHHhhcc--------cCCCeEEecCCCC
Confidence 2 211000 2335999999994
No 25
>KOG3870 consensus Uncharacterized conserved protein [Function unknown]
Probab=26.31 E-value=28 Score=36.94 Aligned_cols=15 Identities=47% Similarity=0.802 Sum_probs=12.6
Q ss_pred CccceEEEeCccCcc
Q 015155 245 CDHERIIWLGDLNYR 259 (412)
Q Consensus 245 ~d~d~vfw~GDLNyR 259 (412)
...+.||+=||||||
T Consensus 350 ~~S~LvIFKGDLNYR 364 (434)
T KOG3870|consen 350 QKSSLVIFKGDLNYR 364 (434)
T ss_pred hhCcEEEEeccccHH
Confidence 346889999999996
No 26
>PRK10947 global DNA-binding transcriptional dual regulator H-NS; Provisional
Probab=21.32 E-value=56 Score=29.55 Aligned_cols=25 Identities=24% Similarity=0.482 Sum_probs=16.5
Q ss_pred cCCCccc-cCCC--ccccCCCCCCCCCCCcccc
Q 015155 305 FAPTYKY-ELNS--EKYYGEDPKVGRRNPSWCD 334 (412)
Q Consensus 305 FpPTYKy-~~gs--~~Y~~~d~~~k~R~PSWcD 334 (412)
=||-||| +++. ..|.| .-|.|.|.-
T Consensus 93 ~paKYky~dp~G~~~TWTG-----rGR~P~wi~ 120 (135)
T PRK10947 93 RPAKYSYVDENGETKTWTG-----QGRTPAVIK 120 (135)
T ss_pred CCCCCcccCCCCCcCcccC-----CCCCCHHHH
Confidence 3788998 5443 35543 469999973
Done!