Query 015157
Match_columns 412
No_of_seqs 258 out of 1726
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:41:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015157.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015157hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3j1z_P YIIP, cation efflux fam 100.0 3.9E-53 1.3E-57 414.7 16.7 279 112-396 9-291 (306)
2 3h90_A Ferrous-iron efflux pum 100.0 2E-51 6.7E-56 398.5 17.2 276 115-397 3-283 (283)
3 3byp_A CZRB protein; membrane 99.5 1.9E-13 6.4E-18 109.9 12.0 84 310-394 1-86 (94)
4 2zzt_A Putative uncharacterize 99.4 3.2E-13 1.1E-17 111.4 9.5 84 312-396 1-87 (107)
5 3h90_A Ferrous-iron efflux pum 97.3 0.00012 4E-09 70.0 4.2 93 116-216 112-204 (283)
6 3j1z_P YIIP, cation efflux fam 97.3 0.00014 4.8E-09 70.3 4.3 94 116-217 121-214 (306)
7 3cq1_A Putative uncharacterize 70.2 15 0.00051 28.7 7.3 77 320-400 7-90 (103)
8 1zpv_A ACT domain protein; str 58.0 40 0.0014 24.9 7.5 75 317-401 15-89 (91)
9 1uwd_A Hypothetical protein TM 54.4 25 0.00086 27.3 5.9 47 352-400 44-91 (103)
10 2ko1_A CTR148A, GTP pyrophosph 51.0 41 0.0014 24.4 6.5 64 317-390 15-78 (88)
11 3lno_A Putative uncharacterize 48.5 28 0.00097 27.4 5.3 47 352-400 46-94 (108)
12 1ib8_A Conserved protein SP14. 43.2 81 0.0028 26.9 7.8 59 321-379 11-69 (164)
13 2dbb_A Putative HTH-type trans 40.9 84 0.0029 25.6 7.5 66 315-392 76-142 (151)
14 1mli_A Muconolactone isomerase 38.4 1.4E+02 0.0047 23.2 7.7 22 350-371 3-24 (96)
15 2kjw_A TS9, 30S ribosomal prot 38.3 98 0.0034 24.0 6.8 68 310-381 8-75 (96)
16 3zzp_A TS9, ribosomal protein 35.4 87 0.003 23.2 5.9 67 310-380 8-74 (77)
17 2cvi_A 75AA long hypothetical 32.5 1.1E+02 0.0038 22.1 6.2 67 320-399 14-81 (83)
18 1rwu_A Hypothetical UPF0250 pr 29.7 1.7E+02 0.006 23.1 7.1 67 312-387 42-108 (109)
19 1vq3_A Phosphoribosylformylgly 26.5 2.2E+02 0.0075 21.9 8.2 60 322-391 34-93 (94)
20 3gxs_A Phenylacetate-coenzyme 25.6 2.2E+02 0.0076 21.6 8.5 57 322-380 17-76 (109)
21 3lax_A Phenylacetate-coenzyme 25.3 2.2E+02 0.0075 21.5 8.9 58 322-380 17-76 (109)
22 2cg4_A Regulatory protein ASNC 24.5 1.3E+02 0.0046 24.4 6.0 61 319-392 80-141 (152)
23 2jsx_A Protein NAPD; TAT, proo 23.6 1.3E+02 0.0046 23.0 5.3 65 317-394 15-79 (95)
24 2f1f_A Acetolactate synthase i 23.1 2.4E+02 0.0082 23.9 7.3 63 317-388 13-75 (164)
25 1gtd_A MTH169; synthetase, FGA 22.8 2.4E+02 0.0081 21.0 8.0 63 322-395 21-83 (85)
26 2cyy_A Putative HTH-type trans 22.3 1.5E+02 0.0052 24.0 5.9 65 315-393 74-139 (151)
27 2jp3_A FXYD domain-containing 22.2 77 0.0026 22.9 3.2 29 176-205 10-38 (67)
28 3i4p_A Transcriptional regulat 22.1 2.1E+02 0.0071 23.6 6.8 62 318-393 76-138 (162)
29 2i52_A Hypothetical protein; s 21.2 74 0.0025 25.8 3.3 30 365-395 41-70 (121)
30 2jo1_A Phospholemman; FXYD1, N 21.0 84 0.0029 22.9 3.2 29 176-205 9-37 (72)
31 3eb7_A Insecticidal delta-endo 21.0 3E+02 0.01 28.2 8.9 69 263-331 5-78 (589)
32 2zxe_G FXYD10, phospholemman-l 20.7 79 0.0027 23.3 3.1 29 175-204 11-39 (74)
33 2pn6_A ST1022, 150AA long hypo 20.5 1.7E+02 0.0057 23.6 5.8 63 318-393 75-138 (150)
34 2pc6_A Probable acetolactate s 20.1 2.4E+02 0.0081 24.0 6.6 63 317-388 14-76 (165)
No 1
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=100.00 E-value=3.9e-53 Score=414.75 Aligned_cols=279 Identities=22% Similarity=0.263 Sum_probs=256.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCccchhhhHHHHHH
Q 015157 112 VQHERAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWITHLSMKNINIYKYPIGKLRMQPVGIIIF 191 (412)
Q Consensus 112 ~~~~~al~isi~~N~~l~~~k~~~~~~sgS~aL~adaldsl~D~~s~~i~l~~~~~~~~~~~~~~P~G~~R~E~l~~li~ 191 (412)
...|++.++++++|++++++|+++|++|||+||+||++||++|++++++++++.+.++||++++|||||+|+|+++++++
T Consensus 9 ~~vr~a~~~si~~n~~l~~~k~~ag~~sgS~ALlaDa~hsl~D~~s~~i~l~~~~~s~k~~d~~~pyG~~R~E~l~al~~ 88 (306)
T 3j1z_P 9 FWVKLASRASVATALTLITIKLLAWLYSGSASMLASLTDSFADTLASIINFIAIRYAIVPADHDHRYGHGKAEPLAALAQ 88 (306)
T ss_dssp CCSSTTHHHHHHHHHHHTHHHHHTCTTSSSSCCCTHHHHTTHHHHHHHHHHHHHHHHTSCCCCTTSSCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCchhhHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hcCHHHHHhHHHhhhhHHHH
Q 015157 192 AAVMATLGFQVLVQAVEQLIKDEPSEKMTSLQLIWLYAIMLSATGIKLALWFYCRS----SGNKIVRAYAKDHYFDVVTN 267 (412)
Q Consensus 192 ~~~m~~~~~~vl~esi~~Li~~~~~~~~~~~~~~~~i~i~~ia~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dvi~~ 267 (412)
|++++++++++++|++++|++|++.+ ...+++++++++++++.++++++++ .+|..++|.+.|+++|+++|
T Consensus 89 ~~~l~~~~~~i~~eai~~l~~p~~~~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s 163 (306)
T 3j1z_P 89 SAFIMGSAFLLLFYGGERLLNPSPVE-----NATLGVVVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLN 163 (306)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTCCGG-----GTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHhhhheecCCCcc-----ccccchhhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhh
Confidence 99999999999999999999988763 2234567788888999888888864 34788999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhCCCccccceeEEEEeC
Q 015157 268 VVGLIAAVLGDEFYWWIDPVGAILLAIYTITNWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFG 347 (412)
Q Consensus 268 ~~~lv~~~l~~~~~~~~Dpi~aiiIa~~ii~~~~~~~~e~~~~Llg~s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G 347 (412)
++++++.++..++|||+||++++++++++++.|+++++++...|+|+++|++..++|++.+.+. |+|.++|++|+|+.|
T Consensus 164 ~~vli~~~~~~~g~~~~Dpi~ai~Ia~~I~~~~~~l~~~s~~~Ll~~~~~~~~~~~I~~~i~~~-~~V~~vh~l~~~~~G 242 (306)
T 3j1z_P 164 AAVLLALVLSQYGWWWADGLFAVLIACYIGQQAFDLGYRSIQALLDRELDEDTRQRIKLIAKED-PRVLGLHDLRTRQAG 242 (306)
T ss_dssp TTCCCTTSSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHS-TTBCCCCCBCCEEET
T ss_pred hHHHHHHHHHHhCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHhcC-CCcceeeeEEEEEEC
Confidence 9777765555556899999999999999999999999999999999999999999999999998 999999999999999
Q ss_pred CeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeeccC
Q 015157 348 VLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFECD 396 (412)
Q Consensus 348 ~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~~ 396 (412)
+++++++||++|+++|++|+|+|++++|++|++.+++.+++||+||...
T Consensus 243 ~~~~v~~hi~v~~~~sl~eah~i~~~ie~~l~~~~~~~~v~IhveP~~~ 291 (306)
T 3j1z_P 243 KTVFIQFHLELDGNLSLNEAHSITDTTGLRVKAAFEDAEVIIHQDPVQV 291 (306)
T ss_dssp TEEEEEECCEECTTSBHHHHHHHHHHHHHHHHHHSTTCEEEECCEETTS
T ss_pred CcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCCCC
Confidence 9999999999999999999999999999999876778899999999643
No 2
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=100.00 E-value=2e-51 Score=398.53 Aligned_cols=276 Identities=20% Similarity=0.203 Sum_probs=252.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCccchhhhHHHHHHHHH
Q 015157 115 ERAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWITHLSMKNINIYKYPIGKLRMQPVGIIIFAAV 194 (412)
Q Consensus 115 ~~al~isi~~N~~l~~~k~~~~~~sgS~aL~adaldsl~D~~s~~i~l~~~~~~~~~~~~~~P~G~~R~E~l~~li~~~~ 194 (412)
+|++++++++|++++++|+++|+.+||.||+||++||++|++++++++++.+.++||++++|||||+|+|++++++.|++
T Consensus 3 ~r~~~~~~~~n~~l~~~k~~~g~~t~S~allaDa~hsl~D~~~~~~~l~~~~~s~~~~d~~~pyG~~r~E~l~~l~~~~~ 82 (283)
T 3h90_A 3 SRAAIAATAMASLLLLIKIFAWWYTGSVSILAALVDSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMF 82 (283)
T ss_dssp CTHHHHHHHHHHTTHHHHHHSSCSSSSSCCCSTTTHHHHHHHHHHHHHHHHHHHTCCCCSSCSSCSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999999988999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHh----hcCHHHHHhHHHhhhhHHHHHHH
Q 015157 195 MATLGFQVLVQAVEQLIKDEPSEKMTSLQLIWLYAIMLSATGIKLALWFYCRS----SGNKIVRAYAKDHYFDVVTNVVG 270 (412)
Q Consensus 195 m~~~~~~vl~esi~~Li~~~~~~~~~~~~~~~~i~i~~ia~vv~~~l~~~~~~----~~s~~l~a~a~~~~~Dvi~~~~~ 270 (412)
++++++++++|+++++++|++.+. ..++++++++++++|.++++++++ .+|+.+++.+.|+++|+++++++
T Consensus 83 l~~~~~~i~~eai~~l~~~~~~~~-----~~~~l~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~~v 157 (283)
T 3h90_A 83 ISGSALFLFLTGIQHLISPTPMTD-----PGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAI 157 (283)
T ss_dssp HHHHHHHHHHHHHHTSSSSCCCCC-----CCCCTHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCS
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876532 224567888999999999988865 36899999999999999999876
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHHHHHhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhhCCCccccceeEEEEeCCeE
Q 015157 271 LIAAVLGDEFYWWIDPVGAILLAIYTITNWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLY 350 (412)
Q Consensus 271 lv~~~l~~~~~~~~Dpi~aiiIa~~ii~~~~~~~~e~~~~Llg~s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~ 350 (412)
+++.++....|+|+||++++++++++++.++++++++...|+|.++|++..++|++.+.++ |+|.++|++|+|+.|+++
T Consensus 158 li~~~~~~~g~~~~D~i~~i~ia~~i~~~~~~l~~~s~~~Ll~~~~~~~~~~~i~~~i~~~-~~V~~v~~l~~~~~G~~~ 236 (283)
T 3h90_A 158 LLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSW-PGVSGAHDLRTRQSGPTR 236 (283)
T ss_dssp CSSSCSCSTTSCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHS-SSCSEEEEEEEEEETTEE
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcC-CCcccceeeEEEEECCcE
Confidence 6654432233789999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHHHH-cCCCccEEEEEEeeccCC
Q 015157 351 FVEVDIELPEDLPLKEAHTIGESLQIKIE-ELPEVERAFVHLDFECDH 397 (412)
Q Consensus 351 ~vev~I~v~~~~~l~eah~I~~~lq~~L~-~l~~v~~~~Vhvd~~~~~ 397 (412)
++++||++|++++++|+|++++++|++|+ ++|. .+++||+||+.++
T Consensus 237 ~v~~hv~v~~~~~~~~~~~i~~~i~~~l~~~~~~-~~v~ih~ep~~~~ 283 (283)
T 3h90_A 237 FIQIHLEMEDSLPLVQAHMVADQVEQAILRRFPG-SDVIIHQDPCSVV 283 (283)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHHHHHHHHHHSTT-CEEEEEEECSCCC
T ss_pred EEEEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCC-CeEEEEeccCCCC
Confidence 99999999999999999999999999997 5665 7899999997543
No 3
>3byp_A CZRB protein; membrane protein, zinc transporter, transport protein; 1.70A {Thermus thermophilus} SCOP: d.52.9.1 PDB: 3byr_A
Probab=99.50 E-value=1.9e-13 Score=109.86 Aligned_cols=84 Identities=20% Similarity=0.420 Sum_probs=73.3
Q ss_pred HhhCCCCCHHHHHHHHHHHHhh-CCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHH-cCCCccEE
Q 015157 310 SLVGQSASPEVLQKLTYLVIQH-HPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIE-ELPEVERA 387 (412)
Q Consensus 310 ~Llg~s~~~e~~~~I~~~~~~~-~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~-~l~~v~~~ 387 (412)
.|+|.+++++..++|++.+.++ .|+|.++|++|+|+.|+.+++++||++++++++.++|++.+++++.|+ ++|.+ ++
T Consensus 1 ~Lld~~~~~~~~~~I~~~l~~~~~~gV~~vh~l~~~~~g~~~~v~~hi~v~~~~~~~~~h~i~~~ie~~l~~~~~~~-~v 79 (94)
T 3byp_A 1 GLMDEGLPPEEVERIRAFLQERIRGRALEVHDLKTRRAGPRSFLEFHLVVRGDTPVEEAHRLCDELERALAQAFPGL-QA 79 (94)
T ss_dssp -----CCCHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEEECTTCBHHHHHHHHHHHHHHHHHHSTTE-EE
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCCceeeeeEEEEEECCcEEEEEEEEECCCCcHHHHHHHHHHHHHHHHHHCCCC-EE
Confidence 3789899999999999999876 489999999999999999999999999999999999999999999996 56765 99
Q ss_pred EEEEeec
Q 015157 388 FVHLDFE 394 (412)
Q Consensus 388 ~Vhvd~~ 394 (412)
+||+||+
T Consensus 80 tIh~ep~ 86 (94)
T 3byp_A 80 TIHVEPE 86 (94)
T ss_dssp EEEEEEC
T ss_pred EEEeCCC
Confidence 9999984
No 4
>2zzt_A Putative uncharacterized protein; cation diffusion facilitator (CDF), transporter, zinc, membrane protein, cytosolic domain; 2.84A {Thermotoga maritima}
Probab=99.44 E-value=3.2e-13 Score=111.40 Aligned_cols=84 Identities=19% Similarity=0.385 Sum_probs=75.0
Q ss_pred hCCCCCHH--HHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHH-cCCCccEEE
Q 015157 312 VGQSASPE--VLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIE-ELPEVERAF 388 (412)
Q Consensus 312 lg~s~~~e--~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~-~l~~v~~~~ 388 (412)
||.+++++ ..++|++.+.+. |+|.++|++|+|+.|+.+++++||++++++++.++|+|++++++.|+ ++|.+.+++
T Consensus 1 md~~~~~~~~~~~~I~~~l~~~-~gV~~vh~lr~r~~G~~~~v~~hI~v~~~~sv~eah~i~~~ie~~L~~~~~~i~~vt 79 (107)
T 2zzt_A 1 MDGMKRTELDMYDDIFAVLERF-PNVHNPHRVRIRRVGTKYFIEMDIEVDGKMSVKDAHELTVKIRKEMLKRRDDIEDVT 79 (107)
T ss_dssp ---CCHHHHHHHHHHHHHHTTC-SSCEEEEEEEEECSCC-CEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred CCCCCCccHHHHHHHHHHHHcC-CCccccEEEEEEEECCcEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCcEEE
Confidence 46678889 999999999998 99999999999999999999999999999999999999999999996 577799999
Q ss_pred EEEeeccC
Q 015157 389 VHLDFECD 396 (412)
Q Consensus 389 Vhvd~~~~ 396 (412)
||+||...
T Consensus 80 IhvEp~~~ 87 (107)
T 2zzt_A 80 IHVEPLGN 87 (107)
T ss_dssp EEEEETTC
T ss_pred EEEecCCC
Confidence 99999654
No 5
>3h90_A Ferrous-iron efflux pump FIEF; membrane protein, zinc transporter, cell inner membrane, cell membrane, ION transport, iron transport; 2.90A {Escherichia coli k-12} PDB: 2qfi_A
Probab=97.34 E-value=0.00012 Score=69.98 Aligned_cols=93 Identities=16% Similarity=0.150 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCccchhhhHHHHHHHHHH
Q 015157 116 RAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWITHLSMKNINIYKYPIGKLRMQPVGIIIFAAVM 195 (412)
Q Consensus 116 ~al~isi~~N~~l~~~k~~~~~~sgS~aL~adaldsl~D~~s~~i~l~~~~~~~~~~~~~~P~G~~R~E~l~~li~~~~m 195 (412)
.+..+++++|.+++....-.+-..+|.++.|++.|...|+++++.++++.... -+|+..++++++++.++++
T Consensus 112 ~v~~~s~~v~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~~~s~~vli~~~~~--------~~g~~~~D~i~~i~ia~~i 183 (283)
T 3h90_A 112 IVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMMNGAILLALGLS--------WYGWHRADALFALGIGIYI 183 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCCCSCSCSSSCSC--------STTSCCSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCchHHHHHHHHHHHHHH
Confidence 56778899999999988888889999999999999999999998765553221 2477789999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCC
Q 015157 196 ATLGFQVLVQAVEQLIKDEPS 216 (412)
Q Consensus 196 ~~~~~~vl~esi~~Li~~~~~ 216 (412)
+..++.++++++..|++..++
T Consensus 184 ~~~~~~l~~~s~~~Ll~~~~~ 204 (283)
T 3h90_A 184 LYSALRMGYEAVQSLLDRALP 204 (283)
T ss_dssp HHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999987765
No 6
>3j1z_P YIIP, cation efflux family protein; zinc transporter, secondary transporter, alternating access mechanism, metal transport; 13.00A {Shewanella oneidensis}
Probab=97.30 E-value=0.00014 Score=70.34 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhchHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCccchhhhHHHHHHHHHH
Q 015157 116 RAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWITHLSMKNINIYKYPIGKLRMQPVGIIIFAAVM 195 (412)
Q Consensus 116 ~al~isi~~N~~l~~~k~~~~~~sgS~aL~adaldsl~D~~s~~i~l~~~~~~~~~~~~~~P~G~~R~E~l~~li~~~~m 195 (412)
.+..++++.|.++.......+-..+|.++.||+.|...|+++++..+++..... +|+.-++|+++++.|+++
T Consensus 121 ~v~~~~~~~~~~~~~~~~~~~~~~~s~~l~a~~~h~~~D~l~s~~vli~~~~~~--------~g~~~~Dpi~ai~Ia~~I 192 (306)
T 3j1z_P 121 VVSVVAIVLTLALVLLQKRALAATNSTVVEADSLHYKSDLFLNAAVLLALVLSQ--------YGWWWADGLFAVLIACYI 192 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHTTCCTTCCCTTSSCC--------SSSCCCHHHHHHHHHHHH
T ss_pred hhhhhHhhhhHHHHHHHHHhccccCCHHHHHHHHhhcchhhhhhHHHHHHHHHH--------hCcchhhhHHHHHHHHHH
Confidence 466778888999998888888899999999999999999999987666543321 477789999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCc
Q 015157 196 ATLGFQVLVQAVEQLIKDEPSE 217 (412)
Q Consensus 196 ~~~~~~vl~esi~~Li~~~~~~ 217 (412)
+..++.++++++..|++..+++
T Consensus 193 ~~~~~~l~~~s~~~Ll~~~~~~ 214 (306)
T 3j1z_P 193 GQQAFDLGYRSIQALLDRELDE 214 (306)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHhCcccch
Confidence 9999999999999999877653
No 7
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=70.19 E-value=15 Score=28.71 Aligned_cols=77 Identities=19% Similarity=0.265 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhh-CCC----ccccceeEEEEe-CCeEEEEEEEEeC-CCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEe
Q 015157 320 VLQKLTYLVIQH-HPQ----IKRVDTVRAYTF-GVLYFVEVDIELP-EDLPLKEAHTIGESLQIKIEELPEVERAFVHLD 392 (412)
Q Consensus 320 ~~~~I~~~~~~~-~~~----V~~v~~vr~~~~-G~~~~vev~I~v~-~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd 392 (412)
..++|.+.+.++ +|+ +.+..-++--.. |. .|.+.+.++ +.++. ...+.+.++++|+++|++..+.|++.
T Consensus 7 ~~~~V~~aL~~V~DPel~~~iv~lG~V~~v~v~~~--~V~v~l~lt~~~cp~--~~~l~~~i~~al~~l~gv~~V~V~l~ 82 (103)
T 3cq1_A 7 LEAQAWALLEAVYDPELGLDVVNLGLIYDLVVEPP--RAYVRMTLTTPGCPL--HDSLGEAVRQALSRLPGVEEVEVEVT 82 (103)
T ss_dssp HHHHHHHHHTTCBCTTTCSBTTTTTCEEEEEEETT--EEEEEECCSSSSCCS--SCHHHHHHHHHHHTSTTCCEEEEEEC
T ss_pred HHHHHHHHHhCCCCCCCCcCchhcCceEEEEEECC--EEEEEEEECCCCCcH--HHHHHHHHHHHHHhCCCceeEEEEEe
Confidence 345666666664 343 222233332222 44 345555554 44565 45788999999999999999888886
Q ss_pred eccCCCCc
Q 015157 393 FECDHKPE 400 (412)
Q Consensus 393 ~~~~~~pe 400 (412)
.+..=.|+
T Consensus 83 ~~p~W~~~ 90 (103)
T 3cq1_A 83 FEPPWTLA 90 (103)
T ss_dssp CSSCCCGG
T ss_pred cCCCCChH
Confidence 55443333
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=57.96 E-value=40 Score=24.89 Aligned_cols=75 Identities=4% Similarity=0.045 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeeccC
Q 015157 317 SPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFECD 396 (412)
Q Consensus 317 ~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~~ 396 (412)
.|..+.+|...+.++ . .+|.++.....+....+.+.+.++....+ .++.+++++.-+++ .+.+++.++.-
T Consensus 15 rpGila~vt~~la~~-~--~NI~~i~~~~~~~~~~~~i~v~~~~~~~l---~~l~~~L~~~~~~~----~~~~~~~~~~i 84 (91)
T 1zpv_A 15 KSGIVAGVSGKIAEL-G--LNIDDISQTVLDEYFTMMAVVSSDEKQDF---TYLRNEFEAFGQTL----NVKINIQSAAI 84 (91)
T ss_dssp CTTHHHHHHHHHHHT-T--CEEEEEEEEEETTEEEEEEEEEESSCCCH---HHHHHHHHHHHHHH----TEEEEEEEGGG
T ss_pred CCCHHHHHHHHHHHc-C--CCEEEEEeEEEcCEEEEEEEEEeCCCCCH---HHHHHHHHHHHHHc----CCEEEEeeHHH
Confidence 467899999999988 2 36666666666666677888888754443 34555554433322 25566666554
Q ss_pred CCCcc
Q 015157 397 HKPEH 401 (412)
Q Consensus 397 ~~peh 401 (412)
.+.-|
T Consensus 85 f~~~~ 89 (91)
T 1zpv_A 85 FEAMY 89 (91)
T ss_dssp TC---
T ss_pred HHHhh
Confidence 44333
No 9
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=54.43 E-value=25 Score=27.34 Aligned_cols=47 Identities=28% Similarity=0.334 Sum_probs=33.4
Q ss_pred EEEEEEeC-CCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeeccCCCCc
Q 015157 352 VEVDIELP-EDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFECDHKPE 400 (412)
Q Consensus 352 vev~I~v~-~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~~~~pe 400 (412)
|.+.+.++ +.++. ...+.+.++++|+++|++..+.|++..+..=.|+
T Consensus 44 V~v~l~lt~~~cp~--~~~l~~~i~~al~~l~gv~~v~V~l~~~p~W~~~ 91 (103)
T 1uwd_A 44 VKVLMTMTTPMCPL--AGMILSDAEEAIKKIEGVNNVEVELTFDPPWTPE 91 (103)
T ss_dssp EEEEECCSSSCCSS--HHHHHHHHHHHHHTSSSCCEEEEEECCSSCCCGG
T ss_pred EEEEEEECCCCCcH--HHHHHHHHHHHHHhCCCcceEEEEEecCCCCChH
Confidence 44555554 45665 4688999999999999999988888655443333
No 10
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=51.04 E-value=41 Score=24.44 Aligned_cols=64 Identities=9% Similarity=0.038 Sum_probs=41.7
Q ss_pred CHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEE
Q 015157 317 SPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVH 390 (412)
Q Consensus 317 ~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vh 390 (412)
.|..+.+|...+.+. + .+|.++.....+....+.+.+.++. .. -.+++.++|+++++|.++...
T Consensus 15 r~G~L~~I~~~la~~--~-inI~~i~~~~~~~~~~~~i~v~~~~---~~----~l~~l~~~L~~~~~V~~v~~~ 78 (88)
T 2ko1_A 15 KNGMTNQITGVISKF--D-TNIRTIVLNAKDGIFTCNLMIFVKN---TD----KLTTLMDKLRKVQGVFTVERL 78 (88)
T ss_dssp CTTHHHHHHHHHTTS--S-SCEEEEEEEECSSEEEEEEEEEESS---HH----HHHHHHHHHTTCTTEEEEEEE
T ss_pred CCcHHHHHHHHHHHC--C-CCeEEEEEEEcCCEEEEEEEEEECC---HH----HHHHHHHHHhcCCCceEEEEe
Confidence 356788888888876 2 4677777766655334555555542 11 235777888899999876544
No 11
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=48.49 E-value=28 Score=27.40 Aligned_cols=47 Identities=15% Similarity=0.251 Sum_probs=33.1
Q ss_pred EEEEEEeC-CCCCHHHHHHHHHHHHHHH-HcCCCccEEEEEEeeccCCCCc
Q 015157 352 VEVDIELP-EDLPLKEAHTIGESLQIKI-EELPEVERAFVHLDFECDHKPE 400 (412)
Q Consensus 352 vev~I~v~-~~~~l~eah~I~~~lq~~L-~~l~~v~~~~Vhvd~~~~~~pe 400 (412)
|.+.+.++ +.++.. ..|.+.++++| +++|++..+.|++..+..=.|+
T Consensus 46 V~V~ltlt~p~cp~~--~~i~~~i~~al~~~l~Gv~~V~V~l~~~p~W~~~ 94 (108)
T 3lno_A 46 AVITMTMTSIGCPMA--GQIVSDVKKVLSTNVPEVNEIEVNVVWNPPWSKE 94 (108)
T ss_dssp EEEEECCSCTTCTTH--HHHHHHHHHHHHHHCTTCCCEEEEECCSSCCCGG
T ss_pred EEEEEEECCCCCcHH--HHHHHHHHHHHHHhCCCCceEEEEEEecCCCChH
Confidence 34444443 346654 57899999999 8999999999998765544443
No 12
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=43.24 E-value=81 Score=26.85 Aligned_cols=59 Identities=10% Similarity=0.148 Sum_probs=46.1
Q ss_pred HHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHH
Q 015157 321 LQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIE 379 (412)
Q Consensus 321 ~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~ 379 (412)
.++++.++......-..+.++.+.+.|....+.+.|.-+..++++++.++++.+...|.
T Consensus 11 ~~~v~~li~p~~~~g~eLvdve~~~~g~~~~LrV~ID~~~gi~lddC~~vSr~is~~LD 69 (164)
T 1ib8_A 11 VELVREVVEPVIEAPFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEMISPVLD 69 (164)
T ss_dssp HHHHHHHHHHHHCSSSEEEEEEEEEETTEEEEEEEEECSSCCCHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHHHHcCCcEEEEEEEEecCCCcEEEEEEECCCCCCHHHHHHHHHHHHHHhc
Confidence 45566666655222356778888888998888888888888999999999999999997
No 13
>2dbb_A Putative HTH-type transcriptional regulator PH006; ASNC family, helix-turn-helix (HTH) domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=40.91 E-value=84 Score=25.59 Aligned_cols=66 Identities=18% Similarity=0.184 Sum_probs=41.3
Q ss_pred CCCHHHHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEe
Q 015157 315 SASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLD 392 (412)
Q Consensus 315 s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd 392 (412)
..++...+++.+.+.+. |+|..++.+ .|+ ++++.+ .+++ +. .++.+-+.+.|.++|+|.++..++-
T Consensus 76 ~~~~~~~~~~~~~l~~~-peV~~~~~v----tG~~d~~~~v--~~~~--d~---~~l~~~~~~~l~~~~gV~~~~t~iv 142 (151)
T 2dbb_A 76 SKVPSDADKVISEISDI-EYVKSVEKG----VGRYNIIVRL--LLPK--DI---KDAENLISEFLQRIKNAENVEVILI 142 (151)
T ss_dssp ESSHHHHHHHHHHHTTC-TTEEEEEEE----ESSCSEEEEE--EEES--SH---HHHHHHHHHHHHTCCSEEEEEEEEE
T ss_pred EeCCCCHHHHHHHHHcC-CCeEEEeEe----cCCCCEEEEE--EEcC--CH---HHHHHHHHHHhhcCCCeeEEEEEEE
Confidence 45666677888888887 887666543 576 455444 4412 22 2344445577888999987666653
No 14
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=38.41 E-value=1.4e+02 Score=23.20 Aligned_cols=22 Identities=23% Similarity=0.520 Sum_probs=14.2
Q ss_pred EEEEEEEEeCCCCCHHHHHHHH
Q 015157 350 YFVEVDIELPEDLPLKEAHTIG 371 (412)
Q Consensus 350 ~~vev~I~v~~~~~l~eah~I~ 371 (412)
+.|++++.+|++++.+++.++.
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~ 24 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLK 24 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHH
Confidence 4567777777777766655543
No 15
>2kjw_A TS9, 30S ribosomal protein S6; S6 permutant, solution structure, backbone dynamics, folding, ribonucleoprotein, RNA-binding, rRNA-binding; NMR {Thermus thermophilus}
Probab=38.32 E-value=98 Score=23.96 Aligned_cols=68 Identities=19% Similarity=0.127 Sum_probs=53.4
Q ss_pred HhhCCCCCHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcC
Q 015157 310 SLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEEL 381 (412)
Q Consensus 310 ~Llg~s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l 381 (412)
.++.-.+|++..+++.+.+.=. +.|...-.+|+-. ... =|+-+.++|+++-++...+.++++..|++.
T Consensus 8 ~~~~~~a~~~~v~eler~~r~~-e~vlR~l~v~~e~--Mr~-YE~m~Il~P~l~ee~~~~~ve~~~~iI~~~ 75 (96)
T 2kjw_A 8 LWYQVEMPEDRVNDLARELRIR-DNVRRVMVVASTT--PGR-YEVNIVLNPNLDQSQLALEKEIIQRALENY 75 (96)
T ss_dssp EEECCCCCHHHHHHHHHHHHHC-TTCSEEEEEECSS--SSC-EEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecChhHHHHHHHHhccc-hhhhhhhheehhh--hhh-hheeeeeCCCCCHHHHHHHHHHHHHHHHhC
Confidence 3566678999999999988666 8888887777653 112 266677999999999999999999999754
No 16
>3zzp_A TS9, ribosomal protein S6; protein folding, RNA-binding; 0.96A {Thermus thermophilus}
Probab=35.44 E-value=87 Score=23.15 Aligned_cols=67 Identities=18% Similarity=0.179 Sum_probs=49.1
Q ss_pred HhhCCCCCHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHc
Q 015157 310 SLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEE 380 (412)
Q Consensus 310 ~Llg~s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~ 380 (412)
.|+.-.++++.++++.+.+.-. +.|...-.+| .-.++.+ |+-..++|+++-++.....++++..|++
T Consensus 8 vl~~~~a~~~~i~Eler~~rin-e~VlR~l~vr--~d~~r~Y-E~m~Il~P~l~ee~~~~~vek~~~~i~~ 74 (77)
T 3zzp_A 8 TWYQVEMPEDRVNDLARELRIR-DNVRRVMVVA--STTPGRY-EVNIVLNPNLDQSQLQNEKEIIQRALEN 74 (77)
T ss_dssp EEEEEECCHHHHHHHHHHHHTS-TTEEEEEEEE--CSSTTEE-EEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCHhHHHHHHHHhCCC-HHHHHHHHHh--ccCCCce-EEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 3455567899999999998776 7776544433 3334333 6778889999998899999999988864
No 17
>2cvi_A 75AA long hypothetical regulatory protein ASNC; structural genomics, unknown function; 1.50A {Pyrococcus horikoshii} PDB: 2z4p_A 2e1a_A
Probab=32.48 E-value=1.1e+02 Score=22.12 Aligned_cols=67 Identities=19% Similarity=0.328 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeeccCCC
Q 015157 320 VLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFECDHK 398 (412)
Q Consensus 320 ~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~~~~ 398 (412)
..+++.+.+.+. |+|..++.+ .|+ ++.+. +.++ +.+ ++.+-+.++|.++|+|.+..-++-.+..|.
T Consensus 14 ~~~~~~~~l~~~-peV~e~~~v----tG~~D~ll~--v~~~---d~~---~l~~~i~~~l~~~~gV~~~~T~ivl~~~~~ 80 (83)
T 2cvi_A 14 KEREVMEKLLAM-PEVKEAYVV----YGEYDLIVK--VETD---TLK---DLDQFITEKIRKMPEIQMTSTMIAILEHHH 80 (83)
T ss_dssp CHHHHHHHHHTS-TTEEEEEEC----BSSCSEEEE--EEES---SHH---HHHHHHHTTGGGCTTEEEEEEEEEEEETTT
T ss_pred CHHHHHHHHhCC-CCeeEEEEE----cccCCEEEE--EEEC---CHH---HHHHHHHHHhccCCCEeEEEEEEEEehhcc
Confidence 357788888888 887654332 365 45554 4443 233 333445557888999998888887655544
Q ss_pred C
Q 015157 399 P 399 (412)
Q Consensus 399 p 399 (412)
-
T Consensus 81 ~ 81 (83)
T 2cvi_A 81 H 81 (83)
T ss_dssp T
T ss_pred c
Confidence 3
No 18
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=29.73 E-value=1.7e+02 Score=23.06 Aligned_cols=67 Identities=24% Similarity=0.316 Sum_probs=41.6
Q ss_pred hCCCCCHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEE
Q 015157 312 VGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERA 387 (412)
Q Consensus 312 lg~s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~ 387 (412)
+|. ..+++.+.|..++.++.|+-..+ +.|.-+-|...-+.+.|.+. +-++ .+.|-+.|.+.|+|..+
T Consensus 42 IG~-a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~v~---S~eQ----v~aiY~~L~~~~~VkmV 108 (109)
T 1rwu_A 42 MGQ-ALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITINAT---HIEQ----VETLYEELGKIDIVRMV 108 (109)
T ss_dssp EEE-CCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEECCS---SHHH----HHHHHHHHSCSSSCEEE
T ss_pred EEE-CcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEEEC---CHHH----HHHHHHHHhcCCCEEEe
Confidence 443 36678999999999996631222 33433335555677777764 2333 45666777778887643
No 19
>1vq3_A Phosphoribosylformylglycinamidine synthase, PURS; TM1244, PURS SUB 6.3.5.3), structural genomics, joint center for structural JCSG; 1.90A {Thermotoga maritima} SCOP: d.284.1.1 PDB: 3d54_B*
Probab=26.48 E-value=2.2e+02 Score=21.86 Aligned_cols=60 Identities=20% Similarity=0.123 Sum_probs=38.3
Q ss_pred HHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEE
Q 015157 322 QKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHL 391 (412)
Q Consensus 322 ~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhv 391 (412)
+.|...+.+. |+.+|.++|+ |..+.+++ ..+ +-+++.+-.+++.++|-..|-+++..+.+
T Consensus 34 ~aV~~aL~~L--G~~~V~~VR~---GK~~el~~--~~~---~~~~a~~~v~~mc~kLLaNpVIE~y~ie~ 93 (94)
T 1vq3_A 34 ETIERVLREE--KGLPVKKLRL---GKSIHLEV--EAE---NKEKAYEIVKKACEELLVNPVVEEYEVRE 93 (94)
T ss_dssp HHHHHHHHHT--TCCCEEEEEE---EEEEEEEE--ECS---SHHHHHHHHHHHHHHTTSCTTTEEEEEEE
T ss_pred HHHHHHHHHc--CCCccceeee---eeEEEEEe--cCC---CHHHHHHHHHHHHHHHcCCCcceEEEEEe
Confidence 4455666665 5667777776 64444444 332 44567777778878877678888876653
No 20
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=25.59 E-value=2.2e+02 Score=21.61 Aligned_cols=57 Identities=11% Similarity=0.143 Sum_probs=35.6
Q ss_pred HHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCC---HHHHHHHHHHHHHHHHc
Q 015157 322 QKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLP---LKEAHTIGESLQIKIEE 380 (412)
Q Consensus 322 ~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~---l~eah~I~~~lq~~L~~ 380 (412)
++|+..+.++ |+|.....+-+.+-+..-.+.+.+++ +... ..+..++.+.+++.+.+
T Consensus 17 ~eIE~~l~~~-p~v~~~~~v~v~~~~~~e~l~~~ve~-~~~~~~~~~~~~~l~~~i~~~l~~ 76 (109)
T 3gxs_A 17 IQIETILLQF-KELGSDYLITLETAESNDEMTVEVEL-SQLFTDDYGRLQALTREITRQLKD 76 (109)
T ss_dssp HHHHHHHHTC-TTEEEEEEEEEEEETTEEEEEEEEEE-CTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCcCCcEEEEEEcCCCceEEEEEEEE-cCccccchhHHHHHHHHHHHHHHH
Confidence 5678888888 98876555555555443344555666 4332 23556777888888853
No 21
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=25.30 E-value=2.2e+02 Score=21.47 Aligned_cols=58 Identities=9% Similarity=0.095 Sum_probs=38.4
Q ss_pred HHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCC--CCHHHHHHHHHHHHHHHHc
Q 015157 322 QKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPED--LPLKEAHTIGESLQIKIEE 380 (412)
Q Consensus 322 ~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~--~~l~eah~I~~~lq~~L~~ 380 (412)
++|+..+.++ |+|...--+-+..-+..-.+.+.+++.+. .+..+..++.+.++..+..
T Consensus 17 ~eIE~vl~~~-p~v~~~~vv~v~~~~~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~l~~ 76 (109)
T 3lax_A 17 IQIETILLQF-KELGSDYLITLETAESNDEMTVEVELSQLFTDDYGRLQALTREITRQLKD 76 (109)
T ss_dssp HHHHHHHHTC-TTEEEEEEEEEEEETTEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCcccceEEEEeccccceeEEEEEEEeeccccccchhhhhHHHHHHHHHH
Confidence 5677788888 98877655555555555455566666544 3445566778888888864
No 22
>2cg4_A Regulatory protein ASNC; DNA binding, FFRP, LRP family, transcription, DNA- binding, transcription regulation; 2.4A {Escherichia coli} SCOP: a.4.5.32 d.58.4.2
Probab=24.55 E-value=1.3e+02 Score=24.37 Aligned_cols=61 Identities=11% Similarity=0.097 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEe
Q 015157 319 EVLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLD 392 (412)
Q Consensus 319 e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd 392 (412)
...+++.+.+.++ |+|..++.+ .|+ ++++.+ ..+ +.+ ++.+-+.+.|.++|+|.+...++-
T Consensus 80 ~~~~~~~~~l~~~-peV~~~~~v----tG~~d~~~~v--~~~---d~~---~l~~~l~~~l~~~~gV~~~~t~iv 141 (152)
T 2cg4_A 80 KDYPSALAKLESL-DEVTEAYYT----TGHYSIFIKV--MCR---SID---ALQHVLINKIQTIDEIQSTETLIV 141 (152)
T ss_dssp GGHHHHHHHHHTC-TTEEEEEEE----SSSCSEEEEE--EES---CHH---HHHHHHHHTTTTSTTEEEEEEEEC
T ss_pred CCHHHHHHHHhCC-cCeEEEEEE----ecccCEEEEE--EEC---CHH---HHHHHHHHHhhcCCCeeEEEEEEE
Confidence 3577888888888 887766543 465 455544 443 233 344445567778899988776664
No 23
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=23.63 E-value=1.3e+02 Score=23.04 Aligned_cols=65 Identities=11% Similarity=0.030 Sum_probs=39.1
Q ss_pred CHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeec
Q 015157 317 SPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFE 394 (412)
Q Consensus 317 ~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~ 394 (412)
.|+..+.+...+.+. |++ .+ +.. .|...-+-+.++-+ +. .++.+.+ .+|+++|+|.++.....+.
T Consensus 15 ~p~~~~~V~~~L~~i-pgv-Ei---~~~-~~~~GkiVV~iEa~---~~---~~l~~~i-~~I~~i~GVlst~lvy~~~ 79 (95)
T 2jsx_A 15 KSERISDISTQLNAF-PGC-EV---AVS-DAPSGQLIVVVEAE---DS---ETLIQTI-ESVRNVEGVLAVSLVYHQQ 79 (95)
T ss_dssp CTTSHHHHHHHHTTS-TTE-EE---EEE-ETTTTEEEEEEEES---SH---HHHHHHH-HHHTTSTTEEEEEESSCCC
T ss_pred CCCCHHHHHHHHHCC-CCe-EE---EEe-cCCCCCEEEEEEeC---CH---HHHHHHH-HHHhcCCCccEEeEEEEEe
Confidence 566778888888777 765 32 222 12222222233332 22 4566767 7899999999888776653
No 24
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=23.12 E-value=2.4e+02 Score=23.88 Aligned_cols=63 Identities=14% Similarity=0.175 Sum_probs=43.1
Q ss_pred CHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEE
Q 015157 317 SPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAF 388 (412)
Q Consensus 317 ~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~ 388 (412)
.|..+.+|..++.+. + .+|.++.+....+.-...+.++++.+ .+..+++.+.|+++++|.++.
T Consensus 13 rpGvLarIt~lfs~r--g-~NI~Sl~v~~t~d~~~sriti~V~~d------~~~leqI~kqL~Kl~dV~~V~ 75 (164)
T 2f1f_A 13 ESGALSRVIGLFSQR--G-YNIESLTVAPTDDPTLSRMTIQTVGD------EKVLEQIEKQLHKLVDVLRVS 75 (164)
T ss_dssp CTTHHHHHHHHHHTT--T-CCCSEEEEEECSCSSEEEEEEEEESC------HHHHHHHHHHHHHSTTEEEEE
T ss_pred CCcHHHHHHHHHHHC--C-CCeeeceeeecCCCCEEEEEEEEecc------HHHHHHHHHHHcCCCCEEEEE
Confidence 456889999998876 2 57788888766532234555566543 345678888888899986654
No 25
>1gtd_A MTH169; synthetase, FGAM synthetase, purine synthesis pathway, PSI, protein structure initiative, NESG; 2.56A {Methanobacterium thermoautotrophicum} SCOP: d.284.1.1
Probab=22.81 E-value=2.4e+02 Score=20.96 Aligned_cols=63 Identities=11% Similarity=0.056 Sum_probs=40.4
Q ss_pred HHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEeecc
Q 015157 322 QKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDFEC 395 (412)
Q Consensus 322 ~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~ 395 (412)
+.|.+.+.+. |+ ++.++|. |..+.+++ +.+ +-++|.+-.+.+.++|-..|-+++..+.+.+-.
T Consensus 21 ~av~~al~~L--G~-~v~~VR~---gK~~~l~~----~~~-~~~~a~~~v~~~~~~LLaNpVie~~~~~~~~~~ 83 (85)
T 1gtd_A 21 ATIERALALL--GY-EVEDTDT---TDVITFTM----DED-SLEAVEREVEDMCQRLLCNPVIHDYDVSINEMS 83 (85)
T ss_dssp HHHHHHHHHH--TC-CCEEEEE---EEEEEEEE----CCS-CHHHHHHHHHHHHHHTTCCTTTEEEEEEEEEC-
T ss_pred HHHHHHHHHc--CC-ChheEEE---EEEEEEEe----cCC-CHHHHHHHHHHHHHHhcCCCcceEEEEEEEEcC
Confidence 3566666665 55 7777776 54444433 332 445667777777777766788999888877543
No 26
>2cyy_A Putative HTH-type transcriptional regulator PH151; structural genomics, pyrococcus horikosii OT3, NPPSFA; HET: MSE GLN; 1.80A {Pyrococcus horikoshii} SCOP: a.4.5.32 d.58.4.2
Probab=22.32 E-value=1.5e+02 Score=24.01 Aligned_cols=65 Identities=17% Similarity=0.180 Sum_probs=41.7
Q ss_pred CCCHHHHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEee
Q 015157 315 SASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDF 393 (412)
Q Consensus 315 s~~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~ 393 (412)
..+++..+++.+.+.+. |+|..++.+ .|+ ++++.+ ..+ +.++ +.+-+ +.|.+.|+|.+...++--
T Consensus 74 ~~~~~~~~~~~~~l~~~-p~V~~~~~~----tG~~d~~~~v--~~~---d~~~---l~~~~-~~l~~~~gV~~~~t~ivl 139 (151)
T 2cyy_A 74 KVKAGKYSEVASNLAKY-PEIVEVYET----TGDYDMVVKI--RTK---NSEE---LNNFL-DLIGSIPGVEGTHTMIVL 139 (151)
T ss_dssp EECTTCHHHHHHHHHTC-TTEEEEEEC----SSSSSEEEEE--EES---SHHH---HHHHH-HHHHTSTTEEEEEEEECC
T ss_pred EECcccHHHHHHHHhcC-CCeeEeeEe----cCCCCEEEEE--EEC---CHHH---HHHHH-HHHhCCCCEeEEEEEEEE
Confidence 34566778888888888 887665442 365 455544 443 2333 33444 678889999887777654
No 27
>2jp3_A FXYD domain-containing ION transport regulator 4; protein, transcription; NMR {Rattus norvegicus}
Probab=22.18 E-value=77 Score=22.88 Aligned_cols=29 Identities=14% Similarity=0.340 Sum_probs=19.1
Q ss_pred CCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 015157 176 YPIGKLRMQPVGIIIFAAVMATLGFQVLVQ 205 (412)
Q Consensus 176 ~P~G~~R~E~l~~li~~~~m~~~~~~vl~e 205 (412)
|-|-|..+ -+++++++.+++++|+.++..
T Consensus 10 F~YDY~tL-RigGLifA~vLfi~GI~iilS 38 (67)
T 2jp3_A 10 FYYDWESL-QLGGLIFGGLLCIAGIALALS 38 (67)
T ss_dssp GGGGGHHH-HHHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHh-eecchhhHHHHHHHHHHHHHc
Confidence 33344443 257888888888888877654
No 28
>3i4p_A Transcriptional regulator, ASNC family; PSI, structural genom protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens str}
Probab=22.11 E-value=2.1e+02 Score=23.64 Aligned_cols=62 Identities=15% Similarity=0.240 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEee
Q 015157 318 PEVLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDF 393 (412)
Q Consensus 318 ~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~ 393 (412)
++..+++.+.+.+. |+|..++. ..|+ ++++.+. ++ +.++ +.+-+.+.+.++| |.++..++--
T Consensus 76 ~~~~~~~~~~l~~~-peV~~~~~----vtG~~D~~l~v~--~~---d~~~---l~~~l~~~l~~~~-V~~~~T~ivl 138 (162)
T 3i4p_A 76 IEWLKRFSEVVSEF-PEVVEFYR----MSGDVDYLLRVV--VP---DIAA---YDAFYKRMIAKIE-IRDVSSAFAM 138 (162)
T ss_dssp HHHHHHHHHHHHHC-TTEEEEEE----CCSSCSEEEEEE--ES---SHHH---HHHHHHHHHHHCC-CSEEEEEECS
T ss_pred hHHHHHHHHHHhcC-CCEEEeee----cCCCCCEEEEEE--EC---CHHH---HHHHHHHHhhcCC-eeEEEEEEEE
Confidence 35688888889888 88866554 2465 5665554 42 2333 4445556677788 9887777643
No 29
>2i52_A Hypothetical protein; structural genomics, unknown function, PSI, protein structur initiative; 2.08A {Picrophilus torridus} SCOP: d.316.1.1
Probab=21.16 E-value=74 Score=25.77 Aligned_cols=30 Identities=17% Similarity=0.168 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHcCCCccEEEEEEeecc
Q 015157 365 KEAHTIGESLQIKIEELPEVERAFVHLDFEC 395 (412)
Q Consensus 365 ~eah~I~~~lq~~L~~l~~v~~~~Vhvd~~~ 395 (412)
+.++.+-..|++.++..|.++++.|+++ +.
T Consensus 41 eta~sLE~AIE~si~~QP~v~~v~V~I~-d~ 70 (121)
T 2i52_A 41 ENASMAEEFIERSTMIQPFVENVRISIN-NV 70 (121)
T ss_dssp TTHHHHHHHHHHHHTTSTTEEEEEEEEC-CC
T ss_pred ccHHHHHHHHHHHHhcCCceEEEEEEEe-hh
Confidence 4566777888888988999999999998 54
No 30
>2jo1_A Phospholemman; FXYD1, Na,K-ATPase, micelle, hydrolase regulator; NMR {Homo sapiens}
Probab=21.00 E-value=84 Score=22.93 Aligned_cols=29 Identities=17% Similarity=0.473 Sum_probs=19.1
Q ss_pred CCCccchhhhHHHHHHHHHHHHHHHHHHHH
Q 015157 176 YPIGKLRMQPVGIIIFAAVMATLGFQVLVQ 205 (412)
Q Consensus 176 ~P~G~~R~E~l~~li~~~~m~~~~~~vl~e 205 (412)
|-|-|..+. +++++++.+++++|+.++..
T Consensus 9 F~YDY~tLR-iGGLifA~vLfi~GI~iilS 37 (72)
T 2jo1_A 9 FTYDYQSLQ-IGGLVIAGILFILGILIVLS 37 (72)
T ss_dssp GGCSTHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred cccchHHhh-ccchHHHHHHHHHHHHHHHc
Confidence 334444432 57788888888888877654
No 31
>3eb7_A Insecticidal delta-endotoxin CRY8EA1; 2.30A {Bacillus thuringiensis}
Probab=21.00 E-value=3e+02 Score=28.21 Aligned_cols=69 Identities=14% Similarity=0.147 Sum_probs=40.7
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHH-----HhHHHHHHHHHHhhCCCCCHHHHHHHHHHHHhh
Q 015157 263 DVVTNVVGLIAAVLGDEFYWWIDPVGAILLAIYTIT-----NWSGTVQENAVSLVGQSASPEVLQKLTYLVIQH 331 (412)
Q Consensus 263 Dvi~~~~~lv~~~l~~~~~~~~Dpi~aiiIa~~ii~-----~~~~~~~e~~~~Llg~s~~~e~~~~I~~~~~~~ 331 (412)
|++...+++++.+++....|.+-++++++-.++=+. .-+..+.+.+..|+++..++.........+...
T Consensus 5 ~~v~~~i~i~~~ilg~~~vP~vg~~~~~~s~l~~~lwp~~~~~w~~~~~~ve~lIdq~I~~~~~~~a~~~l~gl 78 (589)
T 3eb7_A 5 DAVKTAISLVGTILGKLGVPLVGPIVSLYSTLIDVLWPGGKSQWEIFMEQVEALINQKIAEYARAKALAELEGL 78 (589)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHCCSSSCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHhhhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666677777666544444444433221111111 235678899999999998887766655555443
No 32
>2zxe_G FXYD10, phospholemman-like protein; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_G*
Probab=20.66 E-value=79 Score=23.28 Aligned_cols=29 Identities=28% Similarity=0.497 Sum_probs=19.3
Q ss_pred CCCCccchhhhHHHHHHHHHHHHHHHHHHH
Q 015157 175 KYPIGKLRMQPVGIIIFAAVMATLGFQVLV 204 (412)
Q Consensus 175 ~~P~G~~R~E~l~~li~~~~m~~~~~~vl~ 204 (412)
.|-|-|..+ -+++++++.+++.+|+.++.
T Consensus 11 pF~YDY~tL-RigGLifA~vLfi~GI~iil 39 (74)
T 2zxe_G 11 RFTYDYYRL-RVVGLIVAAVLCVIGIIILL 39 (74)
T ss_dssp GGCCCHHHH-HHHHHHHHHHHHHHHHHHHT
T ss_pred CcccchHHh-eeccchhHHHHHHHHHHHHH
Confidence 344444443 25888899888888887764
No 33
>2pn6_A ST1022, 150AA long hypothetical transcriptional regulator; LRP/ASNC family Gln binding, structural genomics, NPPSFA; HET: GLN; 1.44A {Sulfolobus tokodaii} PDB: 2efn_A* 2e7x_A* 2e7w_A* 2yx4_A* 2efq_A* 2pmh_A* 2yx7_A* 2efp_A* 2efo_A*
Probab=20.55 E-value=1.7e+02 Score=23.60 Aligned_cols=63 Identities=19% Similarity=0.179 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhhCCCccccceeEEEEeCC-eEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEEEEEee
Q 015157 318 PEVLQKLTYLVIQHHPQIKRVDTVRAYTFGV-LYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAFVHLDF 393 (412)
Q Consensus 318 ~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~-~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~Vhvd~ 393 (412)
++..+++.+.+.+. |+|..++. ..|+ ++++ .+..+ +. .++.+-+.+.|.++|+|.+...++--
T Consensus 75 ~~~~~~~~~~l~~~-p~V~~~~~----~tG~~d~~~--~v~~~---d~---~~l~~~l~~~l~~~~gV~~~~t~ivl 138 (150)
T 2pn6_A 75 KNYHVELGNKLAQI-PGVWGVYF----VLGDNDFIV--MARYK---TR---EEFMEKFLERVMSIPEVERTSTQVVV 138 (150)
T ss_dssp TTHHHHHHHHHHTS-TTEEEEEE----CSSSCSEEE--EEEES---SH---HHHHHHTHHHHTTCTTEEEEEEEECS
T ss_pred hhHHHHHHHHHhcC-chhhhhhh----hcCcCCEEE--EEEEC---CH---HHHHHHHHHHhccCCCeeEEEEEEEE
Confidence 66788899899888 88765543 2365 4554 44443 22 33445555778889999887777654
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=20.06 E-value=2.4e+02 Score=23.95 Aligned_cols=63 Identities=11% Similarity=0.123 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHhhCCCccccceeEEEEeCCeEEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCCccEEE
Q 015157 317 SPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKIEELPEVERAF 388 (412)
Q Consensus 317 ~~e~~~~I~~~~~~~~~~V~~v~~vr~~~~G~~~~vev~I~v~~~~~l~eah~I~~~lq~~L~~l~~v~~~~ 388 (412)
.|..+.+|..++.+. + .+|.++.+....+.-...+.++++.+ ....+++.+.|.++++|.++.
T Consensus 14 rpGvL~rI~~lfs~r--g-~NI~Sl~v~~t~d~g~sritivV~~d------~~~leql~kQL~Kl~dV~~V~ 76 (165)
T 2pc6_A 14 EAGALSRVAGLFSAR--G-YNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNKLIEVVKLI 76 (165)
T ss_dssp STTHHHHHHHHHHHH--T-CCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHHSTTEEEEE
T ss_pred CCcHHHHHHHHHHHC--C-CcEEEEEEEecCCCCEEEEEEEEecc------HHHHHHHHHHhcCCCCEEEEE
Confidence 457899999999887 2 47777777765532234455555533 345678888899999986654
Done!