RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015157
(412 letters)
>gnl|CDD|223131 COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic
ion transport and metabolism].
Length = 304
Score = 152 bits (385), Expect = 6e-43
Identities = 85/306 (27%), Positives = 157/306 (51%), Gaps = 16/306 (5%)
Query: 103 DEEKYLQEQVQHERAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILW 162
EE+ L+ RA IS N+ L K+ A I +GS+A+ A + SL D++A I+
Sbjct: 3 MEEERLKLV---RRAALISLAVNLALALLKLIAGILTGSVALLADAIHSLSDIVASLIVL 59
Query: 163 IT-HLSMKNINIYKYPIGKLRMQPVGIIIFAAVMATLGFQVLVQAVEQLIKDEPSEKMTS 221
I +S K + +P G + + + +I + ++ GF++L++A+++LI +P E
Sbjct: 60 IGLRISSKPPD-RDHPYGHGKAETLASLIVSILIFAAGFEILLEAIKRLISPQPVEPPL- 117
Query: 222 LQLIWLYAIMLSATGIKLALWFYCRSSGNKI----VRAYAKDHYFDVVTNVVGLIAAVLG 277
+ L + IK AL+ Y R G K + A A H DV+T++ L+ +
Sbjct: 118 ----LALGVALISIVIKEALYRYLRRVGKKTNSQALIADALHHRSDVLTSLAVLVGLLGS 173
Query: 278 DEFYWWIDPVGAILLAIYTITNWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKR 337
+ W+DP+ A+L+++Y + +E+ L+ + PE L+K+ +++ P +K
Sbjct: 174 LLGWPWLDPLAALLISLYILKTGFRLFKESVNELMDAALDPEDLEKIRAIILS-VPGVKG 232
Query: 338 VDTVRAYTFGVLYFVEVDIELPEDLPLKEAHTIGESLQIKI-EELPEVERAFVHLDFECD 396
V +R G F++V IE+ DL L+EAH I + ++ +I +E P+V +H++ +
Sbjct: 233 VHDLRTRKSGSRIFIDVHIEVDPDLSLEEAHEIADEVEKRIKKEFPKVADVTIHVEPLGE 292
Query: 397 HKPEHS 402
+ E
Sbjct: 293 KEEEKE 298
>gnl|CDD|216561 pfam01545, Cation_efflux, Cation efflux family. Members of this
family are integral membrane proteins, that are found to
increase tolerance to divalent metal ions such as
cadmium, zinc, and cobalt. These proteins are thought to
be efflux pumps that remove these ions from cells.
Length = 273
Score = 143 bits (362), Expect = 6e-40
Identities = 71/281 (25%), Positives = 142/281 (50%), Gaps = 17/281 (6%)
Query: 127 FLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWIT-HLSMKNINIYKYPIGKLRMQP 185
L K+ A + +GSLA+ A L SL+DL++ + + LS + + ++P G R++P
Sbjct: 1 LLALVKLAAGLLTGSLALLADALHSLIDLLSSLLALLALRLSSRPPD-KRHPFGHGRLEP 59
Query: 186 VGIIIFAAVMATLGFQVLVQAVEQLIKDEPSEKMTSLQLIWLYAIMLSATGIKLALWFYC 245
+ +I + ++ +G +L +++E+LI E E + + L + + L L Y
Sbjct: 60 LAALIVSLLLLGVGVFILYESIERLISPEEIE------PGGILLVALISLVVNLLLALYL 113
Query: 246 RSSGNKI------VRAYAKDHYFDVVTNVVGLIAAVLGDEFYW-WIDPVGAILLAIYTIT 298
R +G KI +RA A DV+ ++ LI +L DP+ ++L+A+ +
Sbjct: 114 RRAGRKIGKKSSALRADALHALVDVLGSLAVLIGLLLILLTGLPIADPLASLLIALLILY 173
Query: 299 NWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLYFVEVDIEL 358
++E+ L+G S PE++ ++ ++ P + V +R + G YFV++ IE+
Sbjct: 174 TGLRLLKESLSELLGASPDPELVDEI-RDALEKLPGVLGVHDLRVWKSGPKYFVDIHIEV 232
Query: 359 PEDLPLKEAHTIGESLQIKI-EELPEVERAFVHLDFECDHK 398
DL ++EAH I + ++ + E+ P + +H++ + +
Sbjct: 233 DPDLTVEEAHEIADEIERALKEKFPGIADVTIHVEPAPEVE 273
>gnl|CDD|233348 TIGR01297, CDF, cation diffusion facilitator family transporter.
This model describes a broadly distributed family of
transporters, a number of which have been shown to
transport divalent cations of cobalt, cadmium and/or
zinc. The family has six predicted transmembrane
domains. Members of the family are variable in length
because of variably sized inserts, often containing
low-complexity sequence [Transport and binding proteins,
Cations and iron carrying compounds].
Length = 268
Score = 108 bits (272), Expect = 4e-27
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 14/273 (5%)
Query: 127 FLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWIT-HLSMKNINIYKYPIGKLRMQP 185
L+ KI + SGSLA+ A + SL D+ A I + +S + + ++P G R +
Sbjct: 1 LLMLIKIVGGLLSGSLALLADAIHSLSDVAASAIALLALRISRRPAD-ERHPFGHGRAEI 59
Query: 186 VGIIIFAAVMATLGFQVLVQAVEQLIKDEPSEKMTSLQLIWLYAIMLSATGIKLALWFYC 245
+ ++ + + +L +A+E+LI EP + + + + L L Y
Sbjct: 60 LAALLNGLFLVVVALFILYEAIERLINPEPEIDG-----GTMLIVAIVGLIVNLILALYL 114
Query: 246 RSSG----NKIVRAYAKDHYFDVVTNVVGLIAAVLGDEFYWWIDPVGAILLAIYTITNWS 301
G + +RA A D +++V LI A+L + W DP+ A+L+++ +
Sbjct: 115 HRVGHRLGSLALRAAALHVLSDALSSVGVLIGALLIYFGWHWADPIAALLISLLILYTAF 174
Query: 302 GTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTFGVLY-FVEVDIELPE 360
++E+ L+ + E L+++ I P +K V + + G F++V + +
Sbjct: 175 RLLKESINVLLDAAPDEEDLEEIKK-AILSIPGVKGVHDLHIWRIGPGKLFLDVHVVVDP 233
Query: 361 DLPLKEAHTIGESLQIKI-EELPEVERAFVHLD 392
DL LK+AH I ++ +I + P +E + ++
Sbjct: 234 DLDLKQAHDIALEIEREILKRHPGIEHVTIQVE 266
>gnl|CDD|224151 COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion
transport and metabolism].
Length = 296
Score = 54.6 bits (132), Expect = 2e-08
Identities = 42/193 (21%), Positives = 88/193 (45%), Gaps = 11/193 (5%)
Query: 107 YLQEQVQHERAMNISNWAN-IFLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWI-T 164
+ + ++ER + I+ N F+L I + +GSLA+ A L L D +A + I
Sbjct: 13 HAHDNPRNERRLLIALLLNLAFMLIEIIGGLL-TGSLALLADALHMLSDALALLLALIAI 71
Query: 165 HLSMKNINIYKYPIGKLRMQPVGIIIFAAVMATLGFQVLVQAVEQLIKDEPSEKMTSLQL 224
L+ + ++ G R++ + + A ++ + +L +A+++L+ P + +
Sbjct: 72 KLARRPAT-KRFTFGYKRLEILAAFLNALLLIVVSLLILWEAIQRLLAPPP---IHYSGM 127
Query: 225 IWLYAIMLSATGIKLALWFYCRSSGNKIVRAYAKDHYF-DVVTNVVGLIAAVLGDEFYW- 282
+ + I L + L + AY H D + +V +IAA++ W
Sbjct: 128 LVVAIIGLVVNLVSALLLHKGHEENLNMRGAYL--HVLGDALGSVGVIIAAIVIRFTGWS 185
Query: 283 WIDPVGAILLAIY 295
W+DP+ +I++A+
Sbjct: 186 WLDPILSIVIALL 198
>gnl|CDD|226474 COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic
ion transport and metabolism].
Length = 314
Score = 47.8 bits (114), Expect = 4e-06
Identities = 60/302 (19%), Positives = 112/302 (37%), Gaps = 43/302 (14%)
Query: 108 LQEQVQHERAMNISNWANIFLLAFKIYATIQSGSLAIAASTLDSLLDL-MAGGILWITHL 166
Q+ + + IS + AF I + SGS++I + SL+D M L ++ L
Sbjct: 12 SQDSSNEQLYLRISIAGTVIFAAFGIIWGLLSGSMSIIFDGVYSLIDAGMTLLSLLVSRL 71
Query: 167 SMKNINIYKYPIGKLRMQPVGIIIFAAVMATLGFQVLVQAVEQLIKDEPSEKMTSLQLIW 226
K+ ++P G ++P+ + I ++A L L+ A+ L+ ++
Sbjct: 72 IAKDPRDARFPYGFWHLEPLVLAINGTLLALLCLYALINALGSLLDGG-----REVEPGH 126
Query: 227 --LYAIMLSATGIKLALWFYCRSS---GNKIVRAYAKDHYFDVVTN---VVGLIAAVL-- 276
Y + +S TG W R + + ++ K + V AA L
Sbjct: 127 AIAYTL-VSVTGCAAIAWKLRRLNRRLKSPLIALDTKQWLMSTCLSAALFVAFAAAWLLA 185
Query: 277 GDEFYW---WIDPVGAILLAIYTITNWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHP 333
G +F + DP+ L+ + I GTV +SA E+L +T +Q
Sbjct: 186 GTKFAHLVVYADPMVLALVCLVFIPLPLGTV---------KSALREILL-MTPNELQQSI 235
Query: 334 QIKRVDTVRAYTFGVLY----------FVEVDIELPEDLPLKEAH---TIGESLQIKIEE 380
+ + V Y F + F+E+ +P + + I + + +
Sbjct: 236 ESHAHEIVEKYGFPSYHVYVARVGRGLFIEIHFIIPRESDARNVEDWDDIRDEIGQSLGS 295
Query: 381 LP 382
L
Sbjct: 296 LG 297
>gnl|CDD|181919 PRK09509, fieF, ferrous iron efflux protein F; Reviewed.
Length = 299
Score = 45.0 bits (107), Expect = 4e-05
Identities = 64/272 (23%), Positives = 118/272 (43%), Gaps = 42/272 (15%)
Query: 127 FLLAFKIYATIQSGSLAIAASTLDSLLDLMAGGILWITHLSMKNINIYKYPIGKLRMQPV 186
LL KI+A +GS+++ A+ +DSL+D+ A S+ N+ + +Y +QP
Sbjct: 22 LLLLIKIFAWWYTGSVSLLAALVDSLVDIAA---------SLTNLLVVRYS-----LQPA 67
Query: 187 ------------GIIIFAAVMATLGFQV--LVQAVEQLIKDEPSEKMTSLQL-IWLYAIM 231
+ A M G + + ++ LI P M + I + +
Sbjct: 68 DDEHTFGHGKAESLAALAQSMFISGSALFLFLTGIQHLISPTP---MNDPGVGIIVTLVA 124
Query: 232 LSATGIKLAL--WFYCRSSGNKIVRAYAKD--HY-FDVVTNVVGLIAAVLGDEFYWWIDP 286
L T I + W R + ++ VRA D HY DV+ N L+A L + D
Sbjct: 125 LICTLILVTFQRWV-VRKTQSQAVRA---DMLHYQSDVMMNGAILLALGLSWYGWHRADA 180
Query: 287 VGAILLAIYTITNWSGTVQENAVSLVGQSASPEVLQKLTYLVIQHHPQIKRVDTVRAYTF 346
+ A+ + IY + + E SL+ ++ E Q++ +V P + +R
Sbjct: 181 LFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEIIDIVTSW-PGVSGAHDLRTRQS 239
Query: 347 GVLYFVEVDIELPEDLPLKEAHTIGESLQIKI 378
G F+++ +E+ ++LPL +AH I + ++ +
Sbjct: 240 GPTRFIQLHLEMEDNLPLVQAHMIADQVEQAL 271
>gnl|CDD|240292 PTZ00148, PTZ00148, 40S ribosomal protein S8; Provisional.
Length = 205
Score = 31.9 bits (73), Expect = 0.42
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 60 TPFHLDLSKTTGLIEGEKEYYEKQFATLKSFEEVDSLVS-------NNAIDEEKYLQEQV 112
PF +K G+ G+K+ Y+K+ K+ ++ +SLV+ N+ ID+ L EQ
Sbjct: 107 APFKQWYAKHYGIDLGKKKKYKKEEENKKAKKKSESLVAKLEVRKKNHKIDKA--LLEQF 164
Query: 113 QHER 116
Q R
Sbjct: 165 QSGR 168
>gnl|CDD|212053 cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1)
transporter CobB-like; solute-binding domain. This NCS1
subfamily includes Escherichia coli CodB (cytosine
permease), and the Saccharomyces cerevisiae
transporters: Fcy21p (Purine-cytosine permease), and
vitamin B6 transporter Tpn1. NCS1s are essential
components of salvage pathways for nucleobases and
related metabolites; their known substrates include
allantoin, uracil, thiamine, and nicotinamide riboside.
NCS1s belong to a superfamily which also contains the
solute carrier 5 family sodium/glucose transporters
(SLC5s), and solute carrier 6 family neurotransmitter
transporters (SLC6s).
Length = 403
Score = 31.9 bits (73), Expect = 0.59
Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
Query: 188 IIIFAAVMAT-LG------FQVLVQAVEQLIKDEPSEKMTSLQLIWLYAIMLSA---TGI 237
I +F V+A LG F + + S+ M + L I+L T
Sbjct: 221 IAVFTTVVAFFLGNSLMFIFGAVGAMA--TGGADISDVMIAQGLGIPAIIVLGLNIWTTN 278
Query: 238 KLALWFYCRSSG-NKIVRAYAKDHYFDVVTNVVGLIAAV-LGDEF-YW------WIDPVG 288
AL Y G I K ++ +VG + A+ L + F W + P+G
Sbjct: 279 DNAL--YASGLGSANITNIPKK--IPVIINGIVGTLLALWLYNNFVGWLNLLGYALPPIG 334
Query: 289 AILLAIYTI 297
AI++A Y I
Sbjct: 335 AIIIADYFI 343
>gnl|CDD|217631 pfam03595, C4dic_mal_tran, C4-dicarboxylate transporter/malic acid
transport protein. This family of transporters have ten
alpha helical transmembrane segments. The structure of a
bacterial homologue of SLAC1 shows it to have a trimeric
arrangement. The pore is composed of five helices with a
conserved phe residue involved in gating. One homologue,
Mae1 from the yeast Schizosaccharomyces pombe, functions
as a malate uptake transporter; another, Ssu1 from
Saccharomyces cerevisiae and other fungi including
Aspergillus fumigatus, is characterized as a sulphite
efflux pump; and TehA from Escherichia coli is
identified as a tellurite resistance protein by virtue
of its association in the tehA/tehB operon. Many
homologues are incorrectly annotated as tellurite
resistance/dicarboxylate transporter (TDT) proteins.
Length = 314
Score = 31.4 bits (72), Expect = 0.71
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 28/134 (20%)
Query: 184 QPVGIIIFAAVMATLGFQVLVQAVEQLIK--DEPSEKMTSLQLIWLYAIMLSATGIKLAL 241
+ F VM T G + + + E + L + L+ ++L+ ++
Sbjct: 1 RHFPPAWFGLVMGTGGLALALHLLPYPFGGLRIIGEILFILAVA-LFLLLLALYLLRFIR 59
Query: 242 WFYCRSSGNKIVRAYAKDHYFDVVTNVVGLIA---AVLGDEFY------------WWIDP 286
+ K V+A + V + G L + WWI
Sbjct: 60 YP-------KAVKAELRHP---VRGSFFGTFPMALLTLINGLLLYGWAPALAYVLWWIGV 109
Query: 287 VGAILLAIYTITNW 300
++LAIY + +
Sbjct: 110 ALHLVLAIYIVFSL 123
>gnl|CDD|223383 COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion
transport and metabolism].
Length = 326
Score = 29.9 bits (68), Expect = 2.3
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 265 VTNVVGLIAAVLGDEF-YWWIDPVGAILLAIYTITNWSGTV 304
V N +G + AVL +W+ +G I LA+ T+T +
Sbjct: 194 VANAIGPLVAVLISSLPPFWVLVLGGIALALGTLTGGPRVI 234
>gnl|CDD|223632 COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid
metabolism].
Length = 192
Score = 29.3 bits (66), Expect = 2.8
Identities = 16/77 (20%), Positives = 30/77 (38%)
Query: 226 WLYAIMLSATGIKLALWFYCRSSGNKIVRAYAKDHYFDVVTNVVGLIAAVLGDEFYWWID 285
WL ++L+ + L S G + + + +V L+ +LG
Sbjct: 101 WLAILILAREILVSYLRALAASLGGRDYVGASGRGKRKTILQMVALLLLLLGLLLTPLWL 160
Query: 286 PVGAILLAIYTITNWSG 302
+G +LLA +T +G
Sbjct: 161 LLGLVLLAAAVLTLITG 177
>gnl|CDD|227102 COG4760, COG4760, Predicted membrane protein [Function unknown].
Length = 276
Score = 29.5 bits (66), Expect = 2.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 9/53 (16%)
Query: 185 PVGII--IFAAVMATLGFQVLVQAVEQLIKDEPSEKMT-------SLQLIWLY 228
P GII +F +A F + A +Q+++ EKM ++ L+WLY
Sbjct: 211 PFGIIFSLFCIGIAAFSFLLDFDAADQMVRAGAPEKMAWGVALGLTVTLVWLY 263
>gnl|CDD|227822 COG5535, RAD4, DNA repair protein RAD4 [DNA replication,
recombination, and repair].
Length = 650
Score = 29.8 bits (67), Expect = 3.4
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 10 HMRVPLLLSEDGGNINEYGRERCCRNSVASLKCDFFSKLPEKVRSGLDPETPFHLDLSKT 69
H+ L G N + R + N + EK LD + + S
Sbjct: 137 HIMDSTCLLLLGFIRNLWFRSKMLSNGLRFN-------RLEKQIKYLDNQNESSISESTY 189
Query: 70 TGLIEGEKEYYEKQFATLKS 89
L+EG + Y K F +
Sbjct: 190 KKLLEGLRFYGNKPFKNIGV 209
>gnl|CDD|237234 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase;
Provisional.
Length = 484
Score = 28.5 bits (64), Expect = 7.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 68 KTTGLIEGEKEYYEKQFAT-LKSFEEVDSLV 97
GL EG + EK F T L S E +++ V
Sbjct: 139 GEAGLAEGSRVVMEKPFGTDLASAEALNAAV 169
>gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase.
Length = 491
Score = 28.5 bits (64), Expect = 8.2
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 12/56 (21%)
Query: 53 RSGLDPETPFHLD--LSKTTGL-IEGEKEYYEKQFATLKSFEEVDSLVSNNAIDEE 105
+SGL E PFH+ L+ L I EK+ + E++ L +A +EE
Sbjct: 168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVK---------EKLKELNEQDASEEE 214
>gnl|CDD|183568 PRK12516, PRK12516, RNA polymerase sigma factor; Provisional.
Length = 187
Score = 27.6 bits (61), Expect = 8.5
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 252 IVRAYAKDHYFDVVTNVVGLIAAVLGDEFY 281
I++A+AK +F+V TN+ + +L +EFY
Sbjct: 45 IMKAWAKQDHFEVGTNMKAWLFTILRNEFY 74
>gnl|CDD|238756 cd01479, Sec24-like, Sec24-like: Protein and membrane traffic in
eukaryotes is mediated by at least in part by the
budding and fusion of intracellular transport vesicles
that selectively carry cargo proteins and lipids from
donor to acceptor organelles. The two main classes of
vesicular carriers within the endocytic and the
biosynthetic pathways are COP- and clathrin-coated
vesicles. Formation of COPII vesicles requires the
ordered assembly of the coat built from several
cytosolic components GTPase Sar1, complexes of
Sec23-Sec24 and Sec13-Sec31. The process is initiated by
the conversion of GDP to GTP by the GTPase Sar1 which
then recruits the heterodimeric complex of Sec23 and
Sec24. This heterodimeric complex generates the
pre-budding complex. The final step leading to membrane
deformation and budding of COPII-coated vesicles is
carried by the heterodimeric complex Sec13-Sec31. The
members of this CD belong to the Sec23-like family. Sec
24 is very similar to Sec23. The Sec23 and Sec24
polypeptides fold into five distinct domains: a
beta-barrel, a zinc finger, a vWA or trunk, an all
helical region and a carboxy Gelsolin domain. The
members of this subgroup carry a partial MIDAS motif and
have the overall Para-Rossmann type fold that is
characteristic of this superfamily.
Length = 244
Score = 28.0 bits (63), Expect = 9.3
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 134 YATIQSGSLAIAASTLDSLLDLMAG 158
Y I+SG LA A L S LD + G
Sbjct: 14 YNAIKSGLLATACEALLSNLDNLPG 38
>gnl|CDD|184693 PRK14467, PRK14467, ribosomal RNA large subunit methyltransferase
N; Provisional.
Length = 348
Score = 27.8 bits (62), Expect = 10.0
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 18/67 (26%)
Query: 61 PFHLDLSK------TTGLIEGEKEYYEKQFATLKSFEEVDSLVSNNAIDEEKYLQEQVQH 114
P+ LDLSK T+G+I K E EV+ VS NA Q
Sbjct: 176 PWGLDLSKRRITISTSGIIHQIKRMAED-----PVMPEVNLAVSLNASS-------QKLR 223
Query: 115 ERAMNIS 121
ER M IS
Sbjct: 224 ERIMPIS 230
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.137 0.404
Gapped
Lambda K H
0.267 0.0729 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,343,815
Number of extensions: 2115043
Number of successful extensions: 2119
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2098
Number of HSP's successfully gapped: 54
Length of query: 412
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 313
Effective length of database: 6,546,556
Effective search space: 2049072028
Effective search space used: 2049072028
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (26.9 bits)