Your job contains 1 sequence.
>015158
MAGLAEGSQFDARQFDARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFE
KPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELA
QQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPD
NIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI
LVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS
RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE
NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 015158
(412 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2020078 - symbol:EIF4A-2 "eif4a-2" species:370... 1956 3.9e-202 1
TAIR|locus:2030285 - symbol:AT1G72730 species:3702 "Arabi... 1892 2.4e-195 1
TAIR|locus:2088237 - symbol:EIF4A1 "eukaryotic translatio... 1859 7.5e-192 1
UNIPROTKB|Q8JFP1 - symbol:EIF4A2 "Eukaryotic initiation f... 1454 6.2e-149 1
UNIPROTKB|Q3SZ65 - symbol:EIF4A2 "Eukaryotic initiation f... 1448 2.7e-148 1
UNIPROTKB|E2R3J1 - symbol:EIF4A2 "Uncharacterized protein... 1448 2.7e-148 1
UNIPROTKB|Q14240 - symbol:EIF4A2 "Eukaryotic initiation f... 1448 2.7e-148 1
UNIPROTKB|A6M930 - symbol:EIF4A2 "Eukaryotic translation ... 1448 2.7e-148 1
MGI|MGI:106906 - symbol:Eif4a2 "eukaryotic translation in... 1448 2.7e-148 1
RGD|1309225 - symbol:Eif4a2 "eukaryotic translation initi... 1448 2.7e-148 1
UNIPROTKB|F8WFX2 - symbol:Eif4a2 "Eukaryotic initiation f... 1448 2.7e-148 1
ZFIN|ZDB-GENE-040426-2802 - symbol:eif4a2 "eukaryotic tra... 1446 4.3e-148 1
ZFIN|ZDB-GENE-040120-6 - symbol:eif4a1b "eukaryotic trans... 1441 1.5e-147 1
UNIPROTKB|Q3SZ54 - symbol:EIF4A1 "Eukaryotic initiation f... 1438 3.1e-147 1
UNIPROTKB|J9NY67 - symbol:EIF4A1 "Uncharacterized protein... 1438 3.1e-147 1
UNIPROTKB|P60842 - symbol:EIF4A1 "Eukaryotic initiation f... 1438 3.1e-147 1
UNIPROTKB|A6M928 - symbol:EIF4A1 "Uncharacterized protein... 1438 3.1e-147 1
MGI|MGI:95303 - symbol:Eif4a1 "eukaryotic translation ini... 1438 3.1e-147 1
UNIPROTKB|Q6P3V8 - symbol:Eif4a1 "Protein Eif4a1" species... 1438 3.1e-147 1
UNIPROTKB|F1P895 - symbol:EIF4A1 "Uncharacterized protein... 1433 1.0e-146 1
ZFIN|ZDB-GENE-031030-2 - symbol:eif4a1a "eukaryotic trans... 1424 9.3e-146 1
POMBASE|SPAC1006.07 - symbol:SPAC1006.07 "translation ini... 1423 1.2e-145 1
UNIPROTKB|A4QVP2 - symbol:TIF1 "ATP-dependent RNA helicas... 1414 1.1e-144 1
FB|FBgn0001942 - symbol:eIF-4a "Eukaryotic initiation fac... 1411 2.2e-144 1
UNIPROTKB|I3LLD5 - symbol:I3LLD5 "Uncharacterized protein... 1392 2.3e-142 1
ASPGD|ASPL0000037981 - symbol:AN2932 species:162425 "Emer... 1387 7.8e-142 1
GENEDB_PFALCIPARUM|PF14_0655 - symbol:PF14_0655 "RNA heli... 1354 2.4e-138 1
UNIPROTKB|Q8IKF0 - symbol:H45 "Helicase 45" species:36329... 1354 2.4e-138 1
WB|WBGene00002083 - symbol:inf-1 species:6239 "Caenorhabd... 1341 5.8e-137 1
ZFIN|ZDB-GENE-040426-915 - symbol:eif4a3 "eukaryotic tran... 1336 2.0e-136 1
FB|FBgn0037573 - symbol:eIF4AIII "eIF4AIII" species:7227 ... 1320 9.8e-135 1
UNIPROTKB|Q5ZM36 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
UNIPROTKB|Q2NL22 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
UNIPROTKB|E2RDZ4 - symbol:EIF4A3 "Uncharacterized protein... 1318 1.6e-134 1
UNIPROTKB|P38919 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
UNIPROTKB|A6M931 - symbol:EIF4A3 "Eukaryotic initiation f... 1318 1.6e-134 1
RGD|1591139 - symbol:Eif4a3 "eukaryotic translation initi... 1318 1.6e-134 1
ASPGD|ASPL0000014018 - symbol:fal1 species:162425 "Emeric... 1310 1.1e-133 1
DICTYBASE|DDB_G0269146 - symbol:ifdA "eukaryotic translat... 1305 3.8e-133 1
UNIPROTKB|J9NU36 - symbol:EIF4A1 "Uncharacterized protein... 1302 7.9e-133 1
WB|WBGene00022029 - symbol:Y65B4A.6 species:6239 "Caenorh... 1297 2.7e-132 1
WB|WBGene00018007 - symbol:F33D11.10 species:6239 "Caenor... 1296 3.4e-132 1
POMBASE|SPAC1F5.10 - symbol:SPAC1F5.10 "ATP-dependent RNA... 1289 1.9e-131 1
UNIPROTKB|E7EQG2 - symbol:EIF4A2 "Eukaryotic initiation f... 1268 3.2e-129 1
TAIR|locus:2091191 - symbol:EIF4A-III "eukaryotic initiat... 1265 6.6e-129 1
UNIPROTKB|F1RZ83 - symbol:EIF4A3 "Eukaryotic initiation f... 1264 8.4e-129 1
SGD|S000001767 - symbol:TIF1 "Translation initiation fact... 1234 1.3e-125 1
SGD|S000003674 - symbol:TIF2 "Translation initiation fact... 1234 1.3e-125 1
CGD|CAL0004095 - symbol:TIF species:5476 "Candida albican... 1224 1.5e-124 1
UNIPROTKB|P87206 - symbol:TIF1 "ATP-dependent RNA helicas... 1224 1.5e-124 1
DICTYBASE|DDB_G0269192 - symbol:tifA "eukaryotic translat... 1209 5.7e-123 1
CGD|CAL0001638 - symbol:FAL1 species:5476 "Candida albica... 1195 1.7e-121 1
GENEDB_PFALCIPARUM|PFD1070w - symbol:PFD1070w "eukaryotic... 1156 2.3e-117 1
UNIPROTKB|F1NTS2 - symbol:EIF4A3 "Eukaryotic initiation f... 1156 2.3e-117 1
UNIPROTKB|Q8IFN9 - symbol:PFD1070w "Eukaryotic initiation... 1156 2.3e-117 1
SGD|S000002428 - symbol:FAL1 "Nucleolar protein required ... 1146 2.7e-116 1
UNIPROTKB|J3KT12 - symbol:EIF4A1 "Eukaryotic initiation f... 1145 3.4e-116 1
UNIPROTKB|E1BSE5 - symbol:EIF4A3 "Eukaryotic initiation f... 1134 5.0e-115 1
UNIPROTKB|F1LP27 - symbol:Eif4a2 "Eukaryotic initiation f... 1130 1.3e-114 1
UNIPROTKB|Q9NZE6 - symbol:EIF4A2 "BM-010" species:9606 "H... 1127 2.8e-114 1
TAIR|locus:2008296 - symbol:AT1G51380 species:3702 "Arabi... 1127 2.8e-114 1
UNIPROTKB|J3QS69 - symbol:EIF4A1 "Eukaryotic initiation f... 988 1.5e-99 1
UNIPROTKB|J3KTB5 - symbol:EIF4A1 "Eukaryotic initiation f... 880 4.1e-88 1
WB|WBGene00018997 - symbol:F57B9.3 species:6239 "Caenorha... 847 1.3e-84 1
UNIPROTKB|J3KSZ0 - symbol:EIF4A1 "Eukaryotic initiation f... 811 8.5e-81 1
CGD|CAL0006152 - symbol:DHH1 species:5476 "Candida albica... 744 1.1e-73 1
UNIPROTKB|Q5AAW3 - symbol:DHH1 "ATP-dependent RNA helicas... 744 1.1e-73 1
SGD|S000002319 - symbol:DHH1 "Cytoplasmic DExD/H-box heli... 733 1.6e-72 1
UNIPROTKB|A4R715 - symbol:DHH1 "ATP-dependent RNA helicas... 715 1.3e-70 1
TAIR|locus:2127043 - symbol:RH8 "RNAhelicase-like 8" spec... 706 1.1e-69 1
TAIR|locus:2098886 - symbol:AT3G61240 species:3702 "Arabi... 704 1.8e-69 1
CGD|CAL0000067 - symbol:DBP5 species:5476 "Candida albica... 700 4.9e-69 1
ASPGD|ASPL0000065093 - symbol:AN7659 species:162425 "Emer... 696 1.3e-68 1
TAIR|locus:2050715 - symbol:AT2G45810 species:3702 "Arabi... 695 1.7e-68 1
UNIPROTKB|A0R8U6 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q63GX5 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q6HPE6 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q73EU1 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q81IT9 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
UNIPROTKB|Q81VG0 - symbol:cshA "DEAD-box ATP-dependent RN... 690 5.6e-68 1
TIGR_CMR|BA_0247 - symbol:BA_0247 "ATP-dependent RNA heli... 690 5.6e-68 1
WB|WBGene00000479 - symbol:cgh-1 species:6239 "Caenorhabd... 690 5.6e-68 1
UNIPROTKB|Q95YF3 - symbol:cgh-1 "ATP-dependent RNA helica... 690 5.6e-68 1
UNIPROTKB|E1BDM8 - symbol:DDX6 "Uncharacterized protein" ... 687 1.2e-67 1
UNIPROTKB|E2RR01 - symbol:DDX6 "Uncharacterized protein" ... 687 1.2e-67 1
UNIPROTKB|P26196 - symbol:DDX6 "Probable ATP-dependent RN... 687 1.2e-67 1
UNIPROTKB|F1SAJ5 - symbol:DDX6 "Uncharacterized protein" ... 687 1.2e-67 1
MGI|MGI:104976 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box ... 687 1.2e-67 1
RGD|1564560 - symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box hel... 687 1.2e-67 1
DICTYBASE|DDB_G0291804 - symbol:ddx6 "DEAD/DEAH box helic... 684 2.4e-67 1
ZFIN|ZDB-GENE-030131-6611 - symbol:wu:fk48d07 "wu:fk48d07... 684 2.4e-67 1
UNIPROTKB|Q5ZKB9 - symbol:DDX6 "Probable ATP-dependent RN... 683 3.1e-67 1
POMBASE|SPBC776.09 - symbol:ste13 "ATP-dependent RNA heli... 681 5.1e-67 1
UNIPROTKB|P54824 - symbol:ddx6 "ATP-dependent RNA helicas... 680 6.5e-67 1
UNIPROTKB|E1C8R1 - symbol:DDX6 "Probable ATP-dependent RN... 678 1.1e-66 1
ASPGD|ASPL0000036135 - symbol:AN10417 species:162425 "Eme... 677 1.3e-66 1
TIGR_CMR|SO_4034 - symbol:SO_4034 "ATP-dependent RNA heli... 673 3.6e-66 1
POMBASE|SPBC12C2.06 - symbol:SPBC12C2.06 "cytoplasmic ATP... 673 3.6e-66 1
SGD|S000005572 - symbol:DBP5 "Cytoplasmic ATP-dependent R... 670 7.4e-66 1
UNIPROTKB|Q5L3G9 - symbol:cshA "DEAD-box ATP-dependent RN... 668 1.2e-65 1
WARNING: Descriptions of 847 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 1956 (693.6 bits), Expect = 3.9e-202, P = 3.9e-202
Identities = 382/414 (92%), Positives = 402/414 (97%)
Query: 1 MAGLA-EGSQFDARQFDARMNDLLGSDGQD-FFTSYDEVYDTFDAMGLQENLLRGIYAYG 58
MAG A EG+QFD RQFD R+N++L DGQD FFTSYDEV+++FDAMGLQENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDTRQFDQRLNEVL--DGQDEFFTSYDEVHESFDAMGLQENLLRGIYAYG 58
Query: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 118
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLDY L++CQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRE 118
Query: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR 178
LAQQIEKVMRALGDY GVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDMLRRQSLR
Sbjct: 119 LAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLR 178
Query: 179 PDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 238
PD I++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 PDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 239 RILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
RILVKRDELTLEGIKQF+VNVEKE+WKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 358
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
PENYLHRIGRSGRFGRKGVAINFVT DD+RMLFDIQKFYNVV+EELP+NVADLL
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQKFYNVVVEELPSNVADLL 412
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 1892 (671.1 bits), Expect = 2.4e-195, P = 2.4e-195
Identities = 365/414 (88%), Positives = 395/414 (95%)
Query: 1 MAGLA-EGSQFDARQFDARMNDLLGSDGQD-FFTSYDEVYDTFDAMGLQENLLRGIYAYG 58
MAG+A +G+Q+D RQFD +MN +LG +G++ F+T+YDEV D+FDAM LQ +LLRGIYAYG
Sbjct: 1 MAGMASDGTQYDPRQFDTKMNAILGEEGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYG 60
Query: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 118
FEKPSAIQQRGI+PFCKGLDVIQQAQSGTGKTATFCSG+LQQLD LV+CQALVLAPTRE
Sbjct: 61 FEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDISLVQCQALVLAPTRE 120
Query: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR 178
LAQQIEKVMRALGDYLGVK ACVGGTSVREDQR+L SGVHVVVGTPGRVFD+LRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGVHVVVGTPGRVFDLLRRQSLR 180
Query: 179 PDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 238
D I++FVLDEADEMLSRGFKDQIYDIFQLLP K+QVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 ADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNKPV 240
Query: 239 RILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
RILVKRDELTLEGIKQF+VNV+KEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 358
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 360
Query: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
PENYLHRIGRSGRFGRKGVAINF+T +DERM+ DIQ+FYNVV+EELP+NVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 1859 (659.5 bits), Expect = 7.5e-192, P = 7.5e-192
Identities = 362/392 (92%), Positives = 383/392 (97%)
Query: 1 MAGLA-EGSQFDARQFDARMNDLLGSDGQD-FFTSYDEVYDTFDAMGLQENLLRGIYAYG 58
MAG A EG+QFDARQFD ++N++L +GQD FFTSYD+V+++FDAMGLQENLLRGIYAYG
Sbjct: 1 MAGSAPEGTQFDARQFDQKLNEVL--EGQDEFFTSYDDVHESFDAMGLQENLLRGIYAYG 58
Query: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 118
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG+LQQLD+ L++CQALVLAPTRE
Sbjct: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRE 118
Query: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR 178
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL +GVHVVVGTPGRVFDML+RQSLR
Sbjct: 119 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLR 178
Query: 179 PDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 238
DNI++FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFM+KPV
Sbjct: 179 ADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSKPV 238
Query: 239 RILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
RILVKRDELTLEGIKQF+VNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 239 RILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM 298
Query: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 358
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVIN+DLPTQ
Sbjct: 299 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQ 358
Query: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
PENYLHRIGRSGRFGRKGVAINFVTRDDERML
Sbjct: 359 PENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 1454 (516.9 bits), Expect = 6.2e-149, P = 6.2e-149
Identities = 279/382 (73%), Positives = 327/382 (85%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 26 SNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 85
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED- 150
TF ILQQL+ L E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR +
Sbjct: 86 TFAISILQQLEIDLKETQALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEM 145
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 146 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLS 205
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
IQV + SATMP + LE+T+KFM +P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLC
Sbjct: 206 TNIQVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLC 265
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
DLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSR
Sbjct: 266 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
VLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 391 FDIQKFYNVVIEELPANVADLL 412
DI+ FYN +EE+P NVADL+
Sbjct: 386 RDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 373
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 374 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 1448 (514.8 bits), Expect = 2.7e-148, P = 2.7e-148
Identities = 281/394 (71%), Positives = 329/394 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 15 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 74
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 75 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 134
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 135 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 194
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 195 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 254
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 255 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 314
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 315 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 374
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
INFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 375 INFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 408
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 1446 (514.1 bits), Expect = 4.3e-148, P = 4.3e-148
Identities = 280/382 (73%), Positives = 324/382 (84%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
++++E+ D FD M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 30 SNWNEITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTA 89
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED- 150
TF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR +
Sbjct: 90 TFAISILQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRNEM 149
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L
Sbjct: 150 QKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLS 209
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
IQV + SATMP + LE+T KFM +PVRILVK++ELTLEGIKQF++NVE+EEWKL+TLC
Sbjct: 210 TNIQVVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLC 269
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
DLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RDIIMREFRSGSSR
Sbjct: 270 DLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSR 329
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
VLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L
Sbjct: 330 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 389
Query: 391 FDIQKFYNVVIEELPANVADLL 412
DI+ FYN +EE+P NVADL+
Sbjct: 390 RDIETFYNTTVEEMPMNVADLI 411
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 1441 (512.3 bits), Expect = 1.5e-147, P = 1.5e-147
Identities = 282/396 (71%), Positives = 328/396 (82%)
Query: 18 RMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGL 77
R + L +DG +++DE+ D+FD M L+E LLRGIYAYGFEKPSAIQQR I+P KG
Sbjct: 35 RKSPRLQADGV-IESNWDEIVDSFDDMNLRETLLRGIYAYGFEKPSAIQQRAILPCIKGY 93
Query: 78 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK 137
DVI QAQSGTGKTATF ILQQ+D L QALVLAPTRELAQQI+KV+ ALGDY+G
Sbjct: 94 DVIAQAQSGTGKTATFAISILQQIDIELKGTQALVLAPTRELAQQIQKVILALGDYMGAT 153
Query: 138 VHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR 196
HAC+GGT+VR + Q++ + H+VVGTPGRV+DML R+ L I++FVLDEADEMLSR
Sbjct: 154 CHACIGGTNVRNEVQKLQAEAPHIVVGTPGRVYDMLNRKFLSSKYIKMFVLDEADEMLSR 213
Query: 197 GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH 256
GFKDQIY+IFQ L IQV + SATMP E L++T KFM +PVRILVK++ELTLEGI+QF+
Sbjct: 214 GFKDQIYEIFQKLSTSIQVVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFY 273
Query: 257 VNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 316
+NVEKEEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ
Sbjct: 274 INVEKEEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKD 333
Query: 317 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 376
RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKG
Sbjct: 334 RDLIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKG 393
Query: 377 VAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
VAIN VT DD+R L DI+ FYN +EE+P NVADL+
Sbjct: 394 VAINMVTEDDKRTLRDIETFYNTTVEEMPMNVADLI 429
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 282/402 (70%), Positives = 329/402 (81%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR G
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGG 364
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 365 RFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 1433 (509.5 bits), Expect = 1.0e-146, P = 1.0e-146
Identities = 279/394 (70%), Positives = 325/394 (82%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 13 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDV 72
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 73 IAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCH 132
Query: 140 ACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 133 ACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGF 192
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLEGI+QF++N
Sbjct: 193 KDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYIN 252
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 253 VEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERD 312
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVA
Sbjct: 313 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVA 372
Query: 379 INFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
IN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 373 INMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 1424 (506.3 bits), Expect = 9.3e-146, P = 9.3e-146
Identities = 276/382 (72%), Positives = 319/382 (83%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
+++ E+ D+FD M L+E LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 25 SNWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 84
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF ILQQ+D L QA+VLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR D
Sbjct: 85 TFAISILQQIDVELKATQAMVLAPTRELAQQIQKVVLALGDYMGATCHACIGGTNVRNDV 144
Query: 152 RILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
+ L + V H+VVGTPGRVFDML R+ L P I++F LDEADEMLSRGFKDQIY+IFQ L
Sbjct: 145 QKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLA 204
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
QV + SATMP E LE+T KFM PVRILVK++ELTLEGI+QF++NVEKEEWKL+TLC
Sbjct: 205 TDTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLC 264
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
DLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDM+Q RD+IM+EFRSGSSR
Sbjct: 265 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSR 324
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
VLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN +T DD+R L
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKRTL 384
Query: 391 FDIQKFYNVVIEELPANVADLL 412
DI+ FYN +EE+P NVADL+
Sbjct: 385 RDIETFYNTTVEEMPMNVADLI 406
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 1423 (506.0 bits), Expect = 1.2e-145, P = 1.2e-145
Identities = 270/381 (70%), Positives = 320/381 (83%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
T+YDEV DTFD M L+ LLRGIYAYGFE+PSAIQQR I+P DV+ QAQSGTGKTA
Sbjct: 12 TNYDEVIDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPILGERDVLAQAQSGTGKTA 71
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF +LQ++D L +CQAL+LAPTRELAQQI+KV+ ALGD + V+ HAC+GGT VR+D
Sbjct: 72 TFSISVLQKIDTSLKQCQALILAPTRELAQQIQKVVVALGDLMNVECHACIGGTLVRDDM 131
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
L +GVHVVVGTPGRV DM++R++L D +++FVLDEADEMLSRGFKDQIYDIFQLLPP
Sbjct: 132 AALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLPP 191
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
QV + SATMP + LE+T KFM P+RILVK+DELTLEGIKQF+V VEKEEWKL+TLCD
Sbjct: 192 TAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLEGIKQFYVAVEKEEWKLDTLCD 251
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LYET+ +TQ+VIF NTRRKVDWLT+++ RD TVS+ HGDMDQ RD +M EFR+GSSR+
Sbjct: 252 LYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRI 311
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LITTDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGV+INFVT DD RM+
Sbjct: 312 LITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMR 371
Query: 392 DIQKFYNVVIEELPANVADLL 412
+I++FYN IEE+P N+ADL+
Sbjct: 372 EIEQFYNTHIEEMPMNIADLI 392
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 1414 (502.8 bits), Expect = 1.1e-144, P = 1.1e-144
Identities = 271/387 (70%), Positives = 323/387 (83%)
Query: 26 DGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQS 85
+GQ ++YDE D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P KG DVI QAQS
Sbjct: 11 EGQ-IESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQS 69
Query: 86 GTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 145
GTGKTATF +LQ++D + +CQAL+LAPTRELAQQI+KV+ A+GD++ ++ HAC+GGT
Sbjct: 70 GTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFMNIECHACIGGT 129
Query: 146 SVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDI 205
SVR+D + L G VVVGTPGRV DM++R+ L+ D +++FVLDEADEMLSRGF +QIYDI
Sbjct: 130 SVRDDMKALQDGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEMLSRGFTEQIYDI 189
Query: 206 FQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWK 265
FQLLP QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF++ VEKEEWK
Sbjct: 190 FQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAVEKEEWK 249
Query: 266 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 325
L+TL DLYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDMDQ RD+IM+EFR
Sbjct: 250 LDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFR 309
Query: 326 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 385
SGSSRVLI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D
Sbjct: 310 SGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAD 369
Query: 386 DERMLFDIQKFYNVVIEELPANVADLL 412
D RM+ +I++FY+ IEE+P NVADL+
Sbjct: 370 DVRMMREIEQFYSTQIEEMPMNVADLI 396
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 1411 (501.8 bits), Expect = 2.2e-144, P = 2.2e-144
Identities = 269/381 (70%), Positives = 322/381 (84%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
+++ EVYD FD M L+E LLRGIY YGFEKPSAIQQR I+P +G DVI QAQSGTGKTA
Sbjct: 23 STWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTA 82
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF ILQQ+D + ECQAL+LAPTRELA QI++V+ ALG+Y+ V HAC+GGT+VRED
Sbjct: 83 TFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDA 142
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
RIL SG HVVVGTPGRV+DM+ R+ LR I++FVLDEADEMLSRGFKDQI D+F++LPP
Sbjct: 143 RILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPP 202
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
+QV + SATMPP+ LE++R FM PV ILVK++ELTLEGIKQF+VNV++E WKL TLCD
Sbjct: 203 DVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCD 262
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY+TL+ITQSVIF NTRRKVD LT +M + TVSA HGDM+Q R++IM++FRSGSSRV
Sbjct: 263 LYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRV 322
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LITTDLLARGIDVQQVSLVINYDLP+ ENY+HRIGR GRFGRKGVAINF+T DD R+L
Sbjct: 323 LITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILK 382
Query: 392 DIQKFYNVVIEELPANVADLL 412
DI++FY+ IEE+PAN+ADL+
Sbjct: 383 DIEQFYHTTIEEMPANIADLI 403
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 272/382 (71%), Positives = 315/382 (82%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 25 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 84
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-ED 150
TF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E
Sbjct: 85 TFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEV 144
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
QV + SATMP + LE+T+KFM P+RI LTLEGI+QF++NVE+EEWKL+TLC
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRIX-----LTLEGIRQFYINVEREEWKLDTLC 259
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
DLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSR
Sbjct: 260 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 319
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
VLITTDLLARGIDVQQVSLVINYDLPT ENY+HRIGR GRFGRKGVAIN VT +D+R L
Sbjct: 320 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 379
Query: 391 FDIQKFYNVVIEELPANVADLL 412
DI+ FYN IEE+P NVADL+
Sbjct: 380 RDIETFYNTSIEEMPLNVADLI 401
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
Identities = 262/381 (68%), Positives = 318/381 (83%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
++YDE+ D+FD+M L+ LLRG+YAYGFE+PSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 18 SNYDEITDSFDSMELKPELLRGVYAYGFERPSAIQQRAILPIVKGNDVIAQAQSGTGKTA 77
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF LQ+LD + CQAL++APTRELAQQI+KV+ A+GD++ ++ HAC+GGT+VR+D
Sbjct: 78 TFSISALQKLDPNVKACQALIVAPTRELAQQIQKVVIAIGDFMNIQCHACIGGTAVRDDM 137
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
L G +VVGTPGR+ DM++R+ L+ D +++F+LDEADEMLSRGF +QIYDIFQLLP
Sbjct: 138 NALREGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEMLSRGFTEQIYDIFQLLPQ 197
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
QV + SATMP + LE+T KFM PVRILVK+ ELTLEGIKQF++ VEKEEWKL+TL D
Sbjct: 198 STQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQELTLEGIKQFYIAVEKEEWKLDTLSD 257
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LYET+ ITQ+VIF NTRRKVDWLTDK+ +RD TVSA HGDM+Q RD+IM+EFRSGSSRV
Sbjct: 258 LYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRV 317
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT DD RM+
Sbjct: 318 LIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMR 377
Query: 392 DIQKFYNVVIEELPANVADLL 412
+I++FY+ IEE+P NVADL+
Sbjct: 378 EIEQFYSTQIEEMPMNVADLI 398
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
Identities = 265/380 (69%), Positives = 308/380 (81%)
Query: 35 DEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 94
+E+ DTFDA+GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF
Sbjct: 19 EEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFV 78
Query: 95 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 154
LQ ++Y V CQAL+LAPTRELAQQI+KV+ ALGDYL VK HACVGGT VRED L
Sbjct: 79 ISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKL 138
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
GVH+VVGTPGRV+DM+ ++ L D +++F+LDEADEMLSRGFK QIY++F+ L P IQ
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQ 198
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
V +FSATMP E LE+T +FM P ILVK+DELTLEGI+QF+V VEKEEWKL+TLCDLYE
Sbjct: 199 VALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
TL ITQS+I+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+T
Sbjct: 259 TLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVT 318
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM--LFD 392
TDLLARGIDVQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD+ L
Sbjct: 319 TDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKK 378
Query: 393 IQKFYNVVIEELPANVADLL 412
I+ +Y+ IEE+P VAD L
Sbjct: 379 IESYYSTQIEEMPLEVADYL 398
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
Identities = 265/380 (69%), Positives = 308/380 (81%)
Query: 35 DEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC 94
+E+ DTFDA+GL E LLRGIY+YGFEKPSAIQQRGI P G D I QAQSGTGKTATF
Sbjct: 19 EEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGKTATFV 78
Query: 95 SGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 154
LQ ++Y V CQAL+LAPTRELAQQI+KV+ ALGDYL VK HACVGGT VRED L
Sbjct: 79 ISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTVVREDIDKL 138
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
GVH+VVGTPGRV+DM+ ++ L D +++F+LDEADEMLSRGFK QIY++F+ L P IQ
Sbjct: 139 KQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVFKKLVPDIQ 198
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
V +FSATMP E LE+T +FM P ILVK+DELTLEGI+QF+V VEKEEWKL+TLCDLYE
Sbjct: 199 VALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKLDTLCDLYE 258
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
TL ITQS+I+ NTR+KVD LT +M +R TVS HGDMDQ RD+IMREFRSGS+RVL+T
Sbjct: 259 TLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVT 318
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM--LFD 392
TDLLARGIDVQQVSLVINYDLP P+ Y+HRIGRSGRFGRKGVAINFVT DD+ L
Sbjct: 319 TDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNDDKEKDKLKK 378
Query: 393 IQKFYNVVIEELPANVADLL 412
I+ +Y+ IEE+P VAD L
Sbjct: 379 IESYYSTQIEEMPLEVADYL 398
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 1341 (477.1 bits), Expect = 5.8e-137, P = 5.8e-137
Identities = 258/397 (64%), Positives = 317/397 (79%)
Query: 16 DARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK 75
D ++ ++ +DG +YD+V ++FD M L+E LLRGIY +GFEKPSAIQ+R IVP
Sbjct: 7 DVNVSSVVDADGL-IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTT 65
Query: 76 GLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG 135
G DVI QAQSGTGKTATF ILQ++D+ QALV+APTRELAQQI+KVM ALG+YL
Sbjct: 66 GKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLN 125
Query: 136 VKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLS 195
V + C+GGTSVR+DQR L +G+HVVVGTPGRV DM+ R +L I++FVLDEADEMLS
Sbjct: 126 VNILPCIGGTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLS 185
Query: 196 RGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF 255
RGFKDQIY++F+ +P +QV + SATMP E L++T +FM P+RILVK+DELTLEGI+QF
Sbjct: 186 RGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQF 245
Query: 256 HVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQN 315
++NV+K+EWK + LCDLY + +TQ+VIF NTRRKVD LT+KM TVS HGDMDQ
Sbjct: 246 YINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQA 305
Query: 316 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 375
RD IMREFRSGSSRVLITTD+LARGIDVQQVSLVINYDLP+ ENY+HRIGRSGRFGRK
Sbjct: 306 ERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRK 365
Query: 376 GVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
GVAINFVT +D R L +I+ +Y IEE+P ++ADL+
Sbjct: 366 GVAINFVTENDARQLKEIESYYTTQIEEMPESIADLI 402
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
Identities = 260/385 (67%), Positives = 314/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 81
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATFC +LQ LD + E QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V
Sbjct: 82 GKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNV 141
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 142 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 201
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 202 YLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 261
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 262 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 321
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 322 ASRVLISTDVWARGLDVSQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 381
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 382 RILRDIEQYYSTQIDEMPMNVADLI 406
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 1320 (469.7 bits), Expect = 9.8e-135, P = 9.8e-135
Identities = 266/402 (66%), Positives = 316/402 (78%)
Query: 12 ARQFDARMNDLLGSDGQDFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGI 70
AR+ +A+ DL +F TS D EV TF+AM L+E LLRGIYAYGFEKPSAIQQR I
Sbjct: 2 ARK-NAQAEDL---SNVEFETSEDVEVIPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSI 57
Query: 71 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRAL 130
P KG DVI QAQSGTGKTATF ILQ LD L E Q L L+PTRELA QI+KV+ AL
Sbjct: 58 TPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILAL 117
Query: 131 GDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
GD + V+ H C+GGT++ ED R L G H+V GTPGRVFDM++R+ LR I++ VLDEA
Sbjct: 118 GDMMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEA 177
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEML++GFK+QIYD+++ LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLE
Sbjct: 178 DEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE 237
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GIKQF V VE+EEWK +TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HG
Sbjct: 238 GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHG 297
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSG 370
DM Q RD IM+EFR+G SRVLITTD+ ARGIDVQQVSLVINYDLP E Y+HRIGRSG
Sbjct: 298 DMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG 357
Query: 371 RFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RFGRKGVAINFV DD R+L DI+++Y+ I+E+P NVADL+
Sbjct: 358 RFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPVNVADLI 399
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 28 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 87
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 88 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 147
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 148 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 207
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 208 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 267
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 268 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 327
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 328 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 387
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 388 RILRDIEQYYSTQIDEMPMNVADLI 412
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 1318 (469.0 bits), Expect = 1.6e-134, P = 1.6e-134
Identities = 258/385 (67%), Positives = 312/385 (81%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 1310 (466.2 bits), Expect = 1.1e-133, P = 1.1e-133
Identities = 257/393 (65%), Positives = 311/393 (79%)
Query: 21 DLLGSDGQDFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
D D +F TS + V TF+ M L+E+LLRGIYAYG+E PSA+Q R IV CKG D
Sbjct: 6 DRRADDKMEFNTSKEVTVAPTFEDMHLKESLLRGIYAYGYESPSAVQSRAIVQICKGRDT 65
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF LQ +D + E QALVL+PTRELA QI+ V+ ALGDY+ V+ H
Sbjct: 66 IAQAQSGTGKTATFSISALQVIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCH 125
Query: 140 ACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFK 199
AC+GGT++ ED R L G HVV GTPGRV DM+RR+ LR +I++ VLDEADE+L+RGF+
Sbjct: 126 ACIGGTNIGEDIRKLDYGQHVVSGTPGRVADMIRRRHLRTRHIKMLVLDEADELLNRGFR 185
Query: 200 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNV 259
+QIYD+++ LPP QV V SAT+P + L++T KFM PVR+LVKRDELTLEGIKQ+ + V
Sbjct: 186 EQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRVLVKRDELTLEGIKQYFIAV 245
Query: 260 EKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDI 319
EKEEWK +TLCDLY+TL ITQ+VIF NTRRKVDWLTDKMR + TVS+ HG+M Q RD
Sbjct: 246 EKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDS 305
Query: 320 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 379
IM++FR G+SRVLI+TD+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKGVAI
Sbjct: 306 IMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAI 365
Query: 380 NFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
NFVT DD R+L DI+ +Y+ I+E+P NVADLL
Sbjct: 366 NFVTSDDVRILRDIELYYSTQIDEMPMNVADLL 398
>DICTYBASE|DDB_G0269146 [details] [associations]
symbol:ifdA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269146
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K03257 OMA:AVINYHI EMBL:U78759
RefSeq:XP_645917.1 ProteinModelPortal:P90529 STRING:P90529
PRIDE:P90529 EnsemblProtists:DDB0191262 GeneID:8616858
KEGG:ddi:DDB_G0269146 InParanoid:P90529 Uniprot:P90529
Length = 395
Score = 1305 (464.4 bits), Expect = 3.8e-133, P = 3.8e-133
Identities = 254/384 (66%), Positives = 308/384 (80%)
Query: 29 DFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 88
+F ++YD++ D+FD M L ++LLRGIY+YGFEKPSAIQQR I+P KG D+I QAQSGTG
Sbjct: 14 EFESTYDKIVDSFDNMELPKDLLRGIYSYGFEKPSAIQQRAIIPLSKGFDIIAQAQSGTG 73
Query: 89 KTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 148
KTATF GIL ++D +++CQAL++APTRELAQQI+KV+ ALG+YL +K +AC+GGT +
Sbjct: 74 KTATFTVGILSRIDISVLKCQALIIAPTRELAQQIQKVVLALGEYLHIKSYACIGGTKIT 133
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
+D + L SGVHVVVGTPGRVF+ML R + D IRIF LDEADEMLSRGFKDQIY+IF+
Sbjct: 134 DDIQALQSGVHVVVGTPGRVFEMLSRGIINRDTIRIFCLDEADEMLSRGFKDQIYEIFRF 193
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
LP IQVG+FSATM E L IT KFM PV ILVK+DELTLEGI+QF+VNV E+ K E
Sbjct: 194 LPKTIQVGLFSATMTDETLGITSKFMQNPVSILVKKDELTLEGIRQFYVNVGVEQGKFEV 253
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L DLYETL+ITQSVIF NTRRKVDWLT KM + TVS+THGD Q RD I++ FRSG+
Sbjct: 254 LTDLYETLSITQSVIFCNTRRKVDWLTSKMTEQKFTVSSTHGD--QKDRDGILQAFRSGA 311
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
+RVLITTDLLARGIDVQQVSLVIN+DLPT ENY+HRIGRSGRFGRKGVAINF+T +
Sbjct: 312 TRVLITTDLLARGIDVQQVSLVINFDLPTNIENYIHRIGRSGRFGRKGVAINFITDAERG 371
Query: 389 MLFDIQKFYNVVIEELPANVADLL 412
+ ++ + YN I E+P ++ L
Sbjct: 372 QIDELSRHYNTYIAEMPQDIGSFL 395
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 1302 (463.4 bits), Expect = 7.9e-133, P = 7.9e-133
Identities = 252/348 (72%), Positives = 291/348 (83%)
Query: 66 QQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEK 125
+QR I+P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+K
Sbjct: 76 RQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQK 135
Query: 126 VMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRI 184
V+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++
Sbjct: 136 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 195
Query: 185 FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 244
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 196 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 255
Query: 245 DELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+ELTLEGI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 256 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 315
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+H
Sbjct: 316 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIH 375
Query: 365 RIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
RIGR GRFGRKGVAIN VT +D+R L DI+ FYN IEE+P NVADL+
Sbjct: 376 RIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 423
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 1297 (461.6 bits), Expect = 2.7e-132, P = 2.7e-132
Identities = 252/384 (65%), Positives = 311/384 (80%)
Query: 31 FTSYDEV--YDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 88
F S +EV TFD MGL+E+LLRGIYAYGFEKPSAIQQR I K DVI QAQSGTG
Sbjct: 16 FESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTG 75
Query: 89 KTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 148
KTATF +LQ LD + E QAL+L+PTRELA QI+KV+ ALGDY+ V+ HAC+GGT++
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
ED R L G HVV GTPGRVFDM+RR++LR I++ VLDEADEML++GFK+Q+YDI++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V V++EEWK +T
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L DLY+TL ITQ+V+F NTRRKVDWLTDKM+ + TVS+ HGDM+Q RD +M+EFR+G+
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
+RVLI+TD+ ARG+DV QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R
Sbjct: 316 TRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVR 375
Query: 389 MLFDIQKFYNVVIEELPANVADLL 412
+L DI+++Y+ I+E+P N+AD++
Sbjct: 376 ILRDIEQYYSTQIDEMPMNIADII 399
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
Identities = 251/384 (65%), Positives = 311/384 (80%)
Query: 31 FTSYDEV--YDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTG 88
F S +EV TFD MGL+E+LLRGIYAYGFEKPSAIQQR + K DVI QAQSGTG
Sbjct: 16 FESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTG 75
Query: 89 KTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 148
KTATF +LQ LD + E QAL+L+PTRELA QI+KV+ ALGDY+ V+ HAC+GGT++
Sbjct: 76 KTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
ED R L G HVV GTPGRVFDM+RR++LR I++ VLDEADEML++GFK+Q+YDI++
Sbjct: 136 EDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRY 195
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V V++EEWK +T
Sbjct: 196 LPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDT 255
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L DLY+TL ITQ+V+F NTRRKVDWLTDKM+ + TVS+ HGDM+Q RD +M+EFR+G+
Sbjct: 256 LIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGT 315
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
+RVLI+TD+ ARG+DV QVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +DD R
Sbjct: 316 TRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDVR 375
Query: 389 MLFDIQKFYNVVIEELPANVADLL 412
+L DI+++Y+ I+E+P N+AD++
Sbjct: 376 ILRDIEQYYSTQIDEMPMNIADII 399
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 1289 (458.8 bits), Expect = 1.9e-131, P = 1.9e-131
Identities = 244/382 (63%), Positives = 307/382 (80%)
Query: 32 TSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 90
TS D +F+ M L+E+LLRGIYAYG+E PSA+Q R I+ CKG DVI QAQSGTGKT
Sbjct: 13 TSEDVNAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKT 72
Query: 91 ATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 150
ATF GILQ +D + + QAL+L+PTRELA QI+ V+ ALGD++ V+ HAC+GGTSV D
Sbjct: 73 ATFSIGILQSIDLSVRDTQALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVGND 132
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
+ L G HVV GTPGRV DM+RR++LR N+++ +LDEADE+L++GFK+QIYDI++ LP
Sbjct: 133 IKKLDYGQHVVSGTPGRVTDMIRRRNLRTRNVKMLILDEADELLNQGFKEQIYDIYRYLP 192
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
P QV V SAT+P + LE+T KF PVRILVKRDELTLEG+KQ+ + VEKEEWK +TLC
Sbjct: 193 PGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAVEKEEWKFDTLC 252
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
DLY+TL ITQ+VIF N+RRKVDWLT+KMR + TV++ HG+M Q RD IM++FR G+SR
Sbjct: 253 DLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSR 312
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
VLI TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINFVT +D R+L
Sbjct: 313 VLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRIL 372
Query: 391 FDIQKFYNVVIEELPANVADLL 412
DI+++Y+ VI+E+P N+ D++
Sbjct: 373 RDIEQYYSTVIDEMPMNIGDMV 394
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 1268 (451.4 bits), Expect = 3.2e-129, P = 3.2e-129
Identities = 248/347 (71%), Positives = 289/347 (83%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G +G D ++++E+ D FD M L+E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 14 GPEGMDPDGVIESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDV 73
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQL+ E QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 74 IAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGDYMGATCH 133
Query: 140 ACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 134 ACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGF 193
Query: 199 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVN 258
KDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RILVK++ELTLEGIKQF++N
Sbjct: 194 KDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYIN 253
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
VE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HGDMDQ RD
Sbjct: 254 VEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERD 313
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHR 365
+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT ENY+HR
Sbjct: 314 VIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHR 360
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
Identities = 244/377 (64%), Positives = 302/377 (80%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E +F+ MG++E++LRG+Y YGFEKPSAIQQR ++P +G DVI QAQSGTGKT+
Sbjct: 32 EPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIAL 91
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+ Q +D E QAL+L+PTRELA Q EK ++A+G + ++ HAC+GG SV ED R L
Sbjct: 92 SVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLE 151
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GVHVV GTPGRV DM++R+SLR I++ +LDE+DEMLSRGFKDQIYD+++ LPP +QV
Sbjct: 152 HGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQV 211
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+ SAT+P E LE+T KFM +PV+ILVKRDELTLEGIKQF V VEKEEWK +TLCDLY+T
Sbjct: 212 CLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDT 271
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
L ITQ+VIF NT+RKVD+L++KMRS + TVS+ HGDM Q RD IM EFRSG SRVLITT
Sbjct: 272 LTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITT 331
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ ARGIDVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 332 DVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQ 391
Query: 396 FYNVVIEELPANVADLL 412
+Y+ I+E+P NVADL+
Sbjct: 392 YYSTQIDEMPMNVADLI 408
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 248/385 (64%), Positives = 306/385 (79%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYG +P A QQR I+ K + + +QSGT
Sbjct: 27 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGRPEPGAFQQRKILVVMKSNNAVVISQSGT 86
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V
Sbjct: 87 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNV 146
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
ED R L G HVV GTPGRVFDM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 147 GEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 206
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 207 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 266
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 267 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 326
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 327 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 387 RILRDIEQYYSTQIDEMPMNVADLI 411
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 243/381 (63%), Positives = 300/381 (78%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT
Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTG 74
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED
Sbjct: 75 TFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDA 134
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
L +VVGTPGRVFD ++R+ R D I++F+LDEADEMLS GFK+QIY IF LLPP
Sbjct: 135 EGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPP 193
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNVE+EE+K E L D
Sbjct: 194 TTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTD 253
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+
Sbjct: 254 LYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 313
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D +
Sbjct: 314 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMR 373
Query: 392 DIQKFYNVVIEELPANVADLL 412
+++KFY+ IEELP+++A LL
Sbjct: 374 ELEKFYSTQIEELPSDIATLL 394
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 1234 (439.4 bits), Expect = 1.3e-125, P = 1.3e-125
Identities = 243/381 (63%), Positives = 300/381 (78%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
T+YD+V FD M L ENLLRG++ YGFE+PSAIQQR I+P +G DV+ QAQSGTGKT
Sbjct: 15 TNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTG 74
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF LQ++D + QAL+LAPTRELA QI+KV+ AL ++ +KVHAC+GGTS ED
Sbjct: 75 TFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDA 134
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
L +VVGTPGRVFD ++R+ R D I++F+LDEADEMLS GFK+QIY IF LLPP
Sbjct: 135 EGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPP 193
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
QV + SATMP + LE+T KFM PVRILVK+DELTLEGIKQF+VNVE+EE+K E L D
Sbjct: 194 TTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLTD 253
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY+++++TQ+VIF NTRRKV+ LT K+R+ TVSA + D+ Q RD IM+EFRSGSSR+
Sbjct: 254 LYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRI 313
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT +D +
Sbjct: 314 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMR 373
Query: 392 DIQKFYNVVIEELPANVADLL 412
+++KFY+ IEELP+++A LL
Sbjct: 374 ELEKFYSTQIEELPSDIATLL 394
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 235/380 (61%), Positives = 299/380 (78%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA
Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D
Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDI 135
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
SGV +VVGTPGRV DM+ R+ + D +++F+LDEADEMLS GFK+QIY+IF+LLP
Sbjct: 136 EAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPE 195
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
Q+ + SATMP + LE+T KFMN PVRILVK+DELTLEGIKQF++NVE E++K + LCD
Sbjct: 196 TTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCD 255
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+
Sbjct: 256 LYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRI 315
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+
Sbjct: 316 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMR 375
Query: 392 DIQKFYNVVIEELPANVADL 411
+I+KFY+ IEE+PA++ L
Sbjct: 376 EIEKFYSTQIEEMPADIGAL 395
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 1224 (435.9 bits), Expect = 1.5e-124, P = 1.5e-124
Identities = 235/380 (61%), Positives = 299/380 (78%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
T+YD V FD + L+ N++RGI+ YG+E PSAIQQR I+P +G DV+ QAQSGTGKTA
Sbjct: 16 TNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTA 75
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
TF LQ+++ QAL+LAPTRELA QI+ V+ A+G YL V VHA +GGTS+ +D
Sbjct: 76 TFTISALQRINENEKATQALILAPTRELALQIKNVITAIGLYLKVTVHASIGGTSMSDDI 135
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
SGV +VVGTPGRV DM+ R+ + D +++F+LDEADEMLS GFK+QIY+IF+LLP
Sbjct: 136 EAFRSGVQIVVGTPGRVLDMIERRYFKTDKVKMFILDEADEMLSSGFKEQIYNIFRLLPE 195
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
Q+ + SATMP + LE+T KFMN PVRILVK+DELTLEGIKQF++NVE E++K + LCD
Sbjct: 196 TTQIVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCD 255
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY+++++TQ+VIF NTR KV++LT+K+R + TVSA H D+ Q RD IM+EFRSGSSR+
Sbjct: 256 LYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRI 315
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI+TDLLARGIDVQQVSLVINYDLP ENY+HRIGR GRFGRKGVAINFVT D M+
Sbjct: 316 LISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMR 375
Query: 392 DIQKFYNVVIEELPANVADL 411
+I+KFY+ IEE+PA++ L
Sbjct: 376 EIEKFYSTQIEEMPADIGAL 395
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
Identities = 239/403 (59%), Positives = 308/403 (76%)
Query: 16 DARMNDLLGSDGQDF-----FTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRG 69
D R N +DG F FTS + EV TF++MGL+E LLRGI+ YGFEKPSAIQQR
Sbjct: 5 DRRGNS--SNDGSSFKLNETFTSSEVEVKPTFESMGLREELLRGIFNYGFEKPSAIQQRA 62
Query: 70 IVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRA 129
I+P KG D I QAQSGTGKTATF G LQ ++ + Q L+L+PTRELAQQI+KV A
Sbjct: 63 ILPIIKGRDTIAQAQSGTGKTATFSIGALQCVEVNVRSPQVLILSPTRELAQQIQKVALA 122
Query: 130 LGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDE 189
L +++ ++VHACVGG ++ +D + L +GVH+V GTPGRV DM+ R+SL +I++ +LDE
Sbjct: 123 LSEFMNIQVHACVGGKNLSDDVKKLETGVHIVSGTPGRVLDMITRKSLPTRHIKMMILDE 182
Query: 190 ADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL 249
ADEMLS GF+ QI D+++ LP Q+ + SAT+ + + +T KFM KPVRIL+KRDELTL
Sbjct: 183 ADEMLSLGFQQQINDVYRYLPNGTQIVLVSATLTQDVVSMTEKFMTKPVRILLKRDELTL 242
Query: 250 EGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATH 309
+GIKQF V+VEKE+WK TLCD+Y++L ITQ+VIF NT++KVD LT++MR + TV++ H
Sbjct: 243 DGIKQFFVSVEKEDWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMH 302
Query: 310 GDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRS 369
GDM Q R+ I++ FRSG +RVLITTD+LARGIDVQQVSLVINYDLP ENY+HRIGRS
Sbjct: 303 GDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRS 362
Query: 370 GRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
GRFGRKGVAINFV D R+L DI++FY+ I+E+P N A ++
Sbjct: 363 GRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 1195 (425.7 bits), Expect = 1.7e-121, P = 1.7e-121
Identities = 221/377 (58%), Positives = 295/377 (78%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
+V+ TF++M L+ +LL+GIYAYGFE PSAIQ R I+ G D I QAQSGTGKTATF
Sbjct: 23 KVHRTFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSI 82
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
G+L+ +D ECQAL+L+PTRELA QI+ V++ LGDY+ + HAC+GG +V ED + L
Sbjct: 83 GMLEVIDTKSKECQALILSPTRELAIQIQNVVKHLGDYMNIHTHACIGGKNVGEDVKKLQ 142
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
G +V GTPGRV D+++R++L+ NI++ +LDEADE+ ++GFK+QIY+I++ LPP +QV
Sbjct: 143 QGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQV 202
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
V SAT+P E LE+T KF PV+ILVKRDE++L GIKQ++V E+E+WK +TLCDLY+
Sbjct: 203 VVVSATLPREVLEMTSKFTTDPVKILVKRDEISLSGIKQYYVQCEREDWKFDTLCDLYDN 262
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
L ITQ+VIF NT+ KV+WL D+M+ ++ TV A HGDM Q+ RD IM +FR G+SRVLI+T
Sbjct: 263 LTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLIST 322
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ ARGIDVQQVSLVINYDLPT ENY+HRIGRSGRFGRKG AIN +T+DD L + +K
Sbjct: 323 DVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEK 382
Query: 396 FYNVVIEELPANVADLL 412
+Y+ I+E+P N+ D++
Sbjct: 383 YYSTKIKEMPMNINDIM 399
>GENEDB_PFALCIPARUM|PFD1070w [details] [associations]
symbol:PFD1070w "eukaryotic initiation factor,
putative" species:5833 "Plasmodium falciparum" [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 219/377 (58%), Positives = 286/377 (75%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E+ +F+ +G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F
Sbjct: 14 EICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAV 73
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
G L ++ L E Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L+
Sbjct: 74 GALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALN 133
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
+GVHV+ GTPGR++ ML + L+ I+ V+DEADEML++GFK+Q+YDI++ L P Q+
Sbjct: 134 NGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+ SAT+P E LEIT KFM+KPV+ILVKRDELTLEGIKQF V++EKE+WK ETL DLYE+
Sbjct: 194 ILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYES 253
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
L ITQ+V+F NT+ KVDWLT KM + TV H M Q+ RD IM +FR RVLI+T
Sbjct: 254 LTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLIST 313
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ RG+DVQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 314 DIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQ 373
Query: 396 FYNVVIEELPANVADLL 412
+Y+ I+E+P N+ +LL
Sbjct: 374 YYSTQIDEMPMNITELL 390
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 235/386 (60%), Positives = 292/386 (75%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 29 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 88
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVK-VHACVGGTS 146
GKTATF +LQ LD + E QAL+LAPTRELA QI+KV + + +K +H +G
Sbjct: 89 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFK 148
Query: 147 VREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIF 206
D + G ++ M+RR+SLR I++ VLDEADEML++GFK+QIYD++
Sbjct: 149 QEVDLPAGHEVARCISGIQLQLLYMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVY 208
Query: 207 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKL 266
+ LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK
Sbjct: 209 RYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKF 268
Query: 267 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 326
+TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRS
Sbjct: 269 DTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRS 328
Query: 327 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
G+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 329 GASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDD 388
Query: 387 ERMLFDIQKFYNVVIEELPANVADLL 412
R+L DI+++Y+ I+E+P NVADL+
Sbjct: 389 IRILRDIEQYYSTQIDEMPMNVADLI 414
>UNIPROTKB|Q8IFN9 [details] [associations]
symbol:PFD1070w "Eukaryotic initiation factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006446
"regulation of translational initiation" evidence=ISS] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006446 GO:GO:0016281
GO:GO:0003743 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025
OMA:EDWKFDT RefSeq:XP_001351530.1 ProteinModelPortal:Q8IFN9
SMR:Q8IFN9 EnsemblProtists:PFD1070w:mRNA GeneID:812458
KEGG:pfa:PFD1070w EuPathDB:PlasmoDB:PF3D7_0422700
ProtClustDB:CLSZ2436055 Uniprot:Q8IFN9
Length = 390
Score = 1156 (412.0 bits), Expect = 2.3e-117, P = 2.3e-117
Identities = 219/377 (58%), Positives = 286/377 (75%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E+ +F+ +G+ E LLRGIYAYGFEKPSAIQQRGI P G DVI Q+QSGTGKT F
Sbjct: 14 EICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQSQSGTGKTCVFAV 73
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
G L ++ L E Q ++L+PTRELA+Q +KV AL DY+ V ++ C+GG + +D + L+
Sbjct: 74 GALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCIGGKKMSDDIKALN 133
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
+GVHV+ GTPGR++ ML + L+ I+ V+DEADEML++GFK+Q+YDI++ L P Q+
Sbjct: 134 NGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQVYDIYRFLSPNTQI 193
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+ SAT+P E LEIT KFM+KPV+ILVKRDELTLEGIKQF V++EKE+WK ETL DLYE+
Sbjct: 194 ILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKEQWKYETLADLYES 253
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
L ITQ+V+F NT+ KVDWLT KM + TV H M Q+ RD IM +FR RVLI+T
Sbjct: 254 LTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIMLKFRQCKFRVLIST 313
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ RG+DVQ+VSLV+NYDLP E+Y+HRIGRSGRFGRKGVAINFV DD ++L DI++
Sbjct: 314 DIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQ 373
Query: 396 FYNVVIEELPANVADLL 412
+Y+ I+E+P N+ +LL
Sbjct: 374 YYSTQIDEMPMNITELL 390
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 1146 (408.5 bits), Expect = 2.7e-116, P = 2.7e-116
Identities = 224/379 (59%), Positives = 288/379 (75%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
+V TF++M L+++LLRGIY+YGFE PS+IQ R I G DVI QAQSGTGKTATF
Sbjct: 20 KVSSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTI 79
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRIL 154
G+LQ +D + QAL+L+PTRELA QI +V++ LGDY+ V A GG ++++D +++
Sbjct: 80 GLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQ 139
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR--GFKDQIYDIFQLLPPK 212
G V GTPGRV DM+++Q L+ N+++ VLDEADE+LS GFK QIYDIF LP
Sbjct: 140 KHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 213 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDL 272
QV V SATM + LE+TRKFMN PV+ILVKRDE++LEGIKQ+ VNV+KEEWK +TLCD+
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILVKRDEISLEGIKQYVVNVDKEEWKFDTLCDI 259
Query: 273 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Y++L ITQ VIF NT++KVDWL+ ++ + V + HGDM Q RD +M +FR+G SRVL
Sbjct: 260 YDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVL 319
Query: 333 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 392
I+TD+ ARGIDVQQVSLVINYDLP ENY+HRIGRSGRFGRKGVAINF+T+ D L +
Sbjct: 320 ISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKADLAKLRE 379
Query: 393 IQKFYNVVIEELPANVADL 411
I+KFY++ I +PAN A+L
Sbjct: 380 IEKFYSIKINPMPANFAEL 398
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 1145 (408.1 bits), Expect = 3.4e-116, P = 3.4e-116
Identities = 226/330 (68%), Positives = 267/330 (80%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 244
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG 310
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA HG
Sbjct: 245 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHG 304
Query: 311 DMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
DMDQ RD+IMREFRSGSSRVLITTDLL R
Sbjct: 305 DMDQKERDVIMREFRSGSSRVLITTDLLNR 334
>UNIPROTKB|E1BSE5 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:AADN02041229
EMBL:AADN02041230 IPI:IPI00819993 Ensembl:ENSGALT00000013903
ArrayExpress:E1BSE5 Uniprot:E1BSE5
Length = 402
Score = 1134 (404.2 bits), Expect = 5.0e-115, P = 5.0e-115
Identities = 234/380 (61%), Positives = 290/380 (76%)
Query: 29 DFFTSYD-EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGT 87
+F TS + +V TFD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGT
Sbjct: 28 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGT 87
Query: 88 GKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 147
GKTATF +LQ LD + E QAL+LAPTRELA QI+K + A G+ V V V T
Sbjct: 88 GKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKSLLATGE---VPVPPPVKCTVS 144
Query: 148 REDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQ 207
+Q L+ + + + + DM+RR+SLR I++ VLDEADEML++GFK+QIYD+++
Sbjct: 145 SWEQCRLACFLSLFI-LQSEI-DMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYR 202
Query: 208 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE 267
LPP QV + SAT+P E LE+T KFM P+RILVKRDELTLEGIKQF V VE+EEWK +
Sbjct: 203 YLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFD 262
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
TLCDLY+TL ITQ+VIF NT+RKVDWLT+KMR + TVS+ HGDM Q R+ IM+EFRSG
Sbjct: 263 TLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG 322
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+SRVLI+TD+ ARG+DV QVSL+INYDLP E Y+HRIGRSGR+GRKGVAINFV DD
Sbjct: 323 ASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDI 382
Query: 388 RMLFDIQKFYNVVIEELPAN 407
R+L DI+++Y+ I+E+P N
Sbjct: 383 RILRDIEQYYSTQIDEMPMN 402
>UNIPROTKB|F1LP27 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
IPI:IPI00949972 Ensembl:ENSRNOT00000066369 ArrayExpress:F1LP27
Uniprot:F1LP27
Length = 312
Score = 1130 (402.8 bits), Expect = 1.3e-114, P = 1.3e-114
Identities = 217/301 (72%), Positives = 257/301 (85%)
Query: 116 TREL---AQQIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDM 171
+REL A +I+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDM
Sbjct: 12 SRELYNYAFKIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDM 71
Query: 172 LRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 231
L R+ L P I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+
Sbjct: 72 LNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTK 131
Query: 232 KFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKV 291
KFM P+RILVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKV
Sbjct: 132 KFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKV 191
Query: 292 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 351
DWLT+KM +RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVI
Sbjct: 192 DWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 251
Query: 352 NYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADL 411
NYDLPT ENY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +EE+P NVADL
Sbjct: 252 NYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADL 311
Query: 412 L 412
+
Sbjct: 312 I 312
>UNIPROTKB|Q9NZE6 [details] [associations]
symbol:EIF4A2 "BM-010" species:9606 "Homo sapiens"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CH471052 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
HOVERGEN:HBG107989 HSSP:P10081 EMBL:AC112907 UniGene:Hs.518475
UniGene:Hs.599481 HGNC:HGNC:3284 ChiTaRS:EIF4A2 EMBL:AF208852
IPI:IPI00030296 SMR:Q9NZE6 STRING:Q9NZE6 Ensembl:ENST00000356531
UCSC:uc003fqv.3 Uniprot:Q9NZE6
Length = 312
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 213/292 (72%), Positives = 252/292 (86%)
Query: 122 QIEKVMRALGDYLGVKVHACVGGTSVRED-QRILSSGVHVVVGTPGRVFDMLRRQSLRPD 180
+I+KV+ ALGDY+G HAC+GGT+VR + Q++ + H+VVGTPGRVFDML R+ L P
Sbjct: 21 KIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPK 80
Query: 181 NIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI 240
I++FVLDEADEMLSRGFKDQIY+IFQ L IQV + SATMP + LE+T+KFM P+RI
Sbjct: 81 WIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSATMPTDVLEVTKKFMRDPIRI 140
Query: 241 LVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS 300
LVK++ELTLEGIKQF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +
Sbjct: 141 LVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHA 200
Query: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE 360
RD TVSA HGDMDQ RD+IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT E
Sbjct: 201 RDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRE 260
Query: 361 NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
NY+HRIGR GRFGRKGVAINFVT +D+R+L DI+ FYN +EE+P NVADL+
Sbjct: 261 NYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 312
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 1127 (401.8 bits), Expect = 2.8e-114, P = 2.8e-114
Identities = 215/369 (58%), Positives = 278/369 (75%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+FD MG+ + +LRG+Y YG++KPS IQQR +VP KG DVI QAQSGTGKT+ + Q
Sbjct: 23 SFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVCQ 82
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++ + Q LVL+P+RELA Q EK ++A+G + ++ HAC+GG S+ ED + L GVH
Sbjct: 83 IVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLERGVH 142
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
V GTPGRV+DM++R SL+ +++ VLDE+DEMLS+G KDQIYD+++ LP IQV + S
Sbjct: 143 AVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQVCLIS 202
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT+P E LE+T KFM PVRILVK DELTLEGIKQ++V+V+KEEWK +TLCDLY L I
Sbjct: 203 ATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTIN 262
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
Q++IF NTR+KVDWLT+KMRS + VS+ HGD Q RD IM +FRS SRVLI +D+ A
Sbjct: 263 QAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWA 322
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGIDVQ VS VINYD+P PE Y+HRIGR+GRFGR+GVAINFV D + L DI++ Y
Sbjct: 323 RGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGT 382
Query: 400 VIEELPANV 408
I E+PA++
Sbjct: 383 KIREMPADL 391
>UNIPROTKB|J3QS69 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000578495
Uniprot:J3QS69
Length = 300
Score = 988 (352.9 bits), Expect = 1.5e-99, P = 1.5e-99
Identities = 197/297 (66%), Positives = 236/297 (79%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQ KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQ--KVVMALG 122
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 123 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 182
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE 250
DEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK++ELTLE
Sbjct: 183 DEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE 242
Query: 251 GIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSA 307
GI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA
Sbjct: 243 GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA 299
>UNIPROTKB|J3KTB5 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584860
Uniprot:J3KTB5
Length = 257
Score = 880 (314.8 bits), Expect = 4.1e-88, P = 4.1e-88
Identities = 170/249 (68%), Positives = 204/249 (81%)
Query: 32 TSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTA
Sbjct: 9 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTA 68
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-ED 150
TF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E
Sbjct: 69 TFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEV 128
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIYDIFQ L
Sbjct: 129 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 188
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
QV + SATMP + LE+T+KFM P+RILVK++ELTLEGI+QF++NVE+EEWKL+TLC
Sbjct: 189 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLC 248
Query: 271 DLYETLAIT 279
DLYETL IT
Sbjct: 249 DLYETLTIT 257
>WB|WBGene00018997 [details] [associations]
symbol:F57B9.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0003676 GO:GO:0019915 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 GeneTree:ENSGT00530000062880 KO:K03257
PIR:E88493 RefSeq:NP_498514.1 UniGene:Cel.32055
ProteinModelPortal:Q20935 SMR:Q20935 STRING:Q20935 PaxDb:Q20935
EnsemblMetazoa:F57B9.3 GeneID:186440 KEGG:cel:CELE_F57B9.3
UCSC:F57B9.3 CTD:186440 WormBase:F57B9.3 InParanoid:Q20935
NextBio:931850 Uniprot:Q20935
Length = 363
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 174/369 (47%), Positives = 249/369 (67%)
Query: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 103
M L+E LLRGIY +GFEKPSAIQ+ + P G DV Q+Q+G+GKT ILQ +D
Sbjct: 1 MELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Query: 104 GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVG 163
Q ++LAP R +AQ+ + +++LG L V C+G + E+ +I HV++G
Sbjct: 61 EDAHLQVILLAPQRGMAQRAHEQLKSLGRNLNVNA-TCLGFDTTAENDKIS----HVLMG 115
Query: 164 TPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMP 223
TP D L I++FVLDEADEMLS+GFKDQIY++F+ +P +QV + SATMP
Sbjct: 116 TPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMP 172
Query: 224 PEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVI 283
E L++T +FM P+RILVK+DELTLEGI+QF++NV+K+EWK LCDL +T TQ++I
Sbjct: 173 SEVLDVTNRFMRDPIRILVKKDELTLEGIRQFYINVQKDEWKFNCLCDLLKTSRETQALI 232
Query: 284 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 343
F NTRR+V LT+++ S VS HG+M+ N R+ ++++F S ++RVL+TTDL+ARG++
Sbjct: 233 FCNTRRRVTQLTEQLMSIPIKVSCFHGNMEHNEREDMVKDFNSRNTRVLVTTDLMARGMN 292
Query: 344 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEE 403
+++ SL+INYD+ ENY+ R GR G FG KG+ I+F T +D L I+ Y+ IEE
Sbjct: 293 IRK-SLIINYDVSGNMENYMLRNGRQGNFGSKGLPISFFTENDISDLKKIENHYSTRIEE 351
Query: 404 LPANVADLL 412
+P + + L
Sbjct: 352 MPESFLEYL 360
>UNIPROTKB|J3KSZ0 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC016876 HGNC:HGNC:3282
ChiTaRS:EIF4A1 Ensembl:ENST00000583389 Uniprot:J3KSZ0
Length = 230
Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
Identities = 153/216 (70%), Positives = 182/216 (84%)
Query: 126 VMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRI 184
V+ ALGDY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++
Sbjct: 2 VVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKM 61
Query: 185 FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 244
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 62 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 121
Query: 245 DELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+ELTLEGI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 122 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 181
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
VSA HGDMDQ RD+IMREFRSGSSRVLITTDLL +
Sbjct: 182 VSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLGK 217
>CGD|CAL0006152 [details] [associations]
symbol:DHH1 species:5476 "Candida albicans" [GO:0010494
"cytoplasmic stress granule" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0030996 "cell cycle arrest
in response to nitrogen starvation" evidence=IEA] [GO:0034063
"stress granule assembly" evidence=IEA] [GO:0000753 "cell
morphogenesis involved in conjugation with cellular fusion"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0000290 "deadenylation-dependent
decapping of nuclear-transcribed mRNA" evidence=IEA] [GO:0031142
"induction of conjugation upon nitrogen starvation" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0006152 GO:GO:0005524 GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037 eggNOG:COG0513
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_718704.1
RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3 SMR:Q5AAW3
GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 160/369 (43%), Positives = 225/369 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+ L + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGRV D+ R+ + +FV+DEAD+MLSR FK I I + PP Q +FS
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P K + KP I + DELTL+GI QF+ VE+++ KL L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQIN 268
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L+ I++
Sbjct: 329 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGT 388
Query: 400 VIEELPANV 408
I+ +PA +
Sbjct: 389 EIKPIPATI 397
>UNIPROTKB|Q5AAW3 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:237561 "Candida albicans SC5314" [GO:0010494 "cytoplasmic
stress granule" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0006152 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0008026 EMBL:AACQ01000038 EMBL:AACQ01000037
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_718704.1 RefSeq:XP_718788.1 ProteinModelPortal:Q5AAW3
SMR:Q5AAW3 GeneID:3639490 GeneID:3639628 KEGG:cal:CaO19.13577
KEGG:cal:CaO19.6197 Uniprot:Q5AAW3
Length = 549
Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
Identities = 160/369 (43%), Positives = 225/369 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA+F LQ
Sbjct: 31 SFEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQ 90
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+ L + QAL+L PTRELA Q +V+R LG ++G + GGTS+R+D L VH
Sbjct: 91 LVKPKLNKVQALILVPTRELALQTSQVVRTLGKHVGTQCMVTTGGTSLRDDIVRLHDPVH 150
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGRV D+ R+ + +FV+DEAD+MLSR FK I I + PP Q +FS
Sbjct: 151 ILVGTPGRVLDLAARKVVDLSECPLFVMDEADKMLSREFKGIIEQILEFFPPNRQALLFS 210
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P K + KP I + DELTL+GI QF+ VE+++ KL L L+ L I
Sbjct: 211 ATFPLAVKSFMDKHLTKPYEINLM-DELTLKGISQFYAFVEEKQ-KLHCLNTLFSKLQIN 268
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL
Sbjct: 269 QSIIFCNSTNRVELLAKKITELGYSCYYSHAKMPQQARNKVFHEFRQGKVRNLVCSDLLT 328
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN ++ +D L+ I++
Sbjct: 329 RGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLMSWNDRYSLYKIEQELGT 388
Query: 400 VIEELPANV 408
I+ +PA +
Sbjct: 389 EIKPIPATI 397
>SGD|S000002319 [details] [associations]
symbol:DHH1 "Cytoplasmic DExD/H-box helicase, stimulates mRNA
decapping" species:4932 "Saccharomyces cerevisiae" [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0034063 "stress granule assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=IMP] [GO:0003724 "RNA helicase activity" evidence=IGI;ISS]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IGI;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002319 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 EMBL:BK006938 GO:GO:0003723
GO:GO:0000753 GO:GO:0000932 EMBL:Z67750 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0034063 GO:GO:0008026 eggNOG:COG0513
GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000290 OrthoDB:EOG4QJVWF EMBL:X66057 EMBL:Z74208 PIR:S31229
RefSeq:NP_010121.1 PDB:1S2M PDBsum:1S2M ProteinModelPortal:P39517
SMR:P39517 DIP:DIP-1243N IntAct:P39517 MINT:MINT-385061
STRING:P39517 PaxDb:P39517 PeptideAtlas:P39517 EnsemblFungi:YDL160C
GeneID:851394 KEGG:sce:YDL160C CYGD:YDL160c
EvolutionaryTrace:P39517 NextBio:968552 Genevestigator:P39517
GermOnline:YDL160C Uniprot:P39517
Length = 506
Score = 733 (263.1 bits), Expect = 1.6e-72, P = 1.6e-72
Identities = 156/370 (42%), Positives = 225/370 (60%)
Query: 39 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 98
+TF+ L+ LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L
Sbjct: 46 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTL 105
Query: 99 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 158
+++ L + QAL++ PTRELA Q +V+R LG + G+ GGT++R+D L+ V
Sbjct: 106 EKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETV 165
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
H++VGTPGRV D+ R+ + +F++DEAD+MLSR FK I I LPP Q +F
Sbjct: 166 HILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLF 225
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SAT P E K ++KP I + +ELTL+GI Q++ VE+ + KL L L+ L I
Sbjct: 226 SATFPLTVKEFMVKHLHKPYEINLM-EELTLKGITQYYAFVEERQ-KLHCLNTLFSKLQI 283
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
Q++IF N+ +V+ L K+ ++ +H M Q R+ + EFR G R L+ +DLL
Sbjct: 284 NQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLL 343
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN + +D L+ I++
Sbjct: 344 TRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLINWNDRFNLYKIEQELG 403
Query: 399 VVIEELPANV 408
I +PA +
Sbjct: 404 TEIAAIPATI 413
>UNIPROTKB|A4R715 [details] [associations]
symbol:DHH1 "ATP-dependent RNA helicase DHH1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0006417 GO:GO:0006397 GO:GO:0003723 GO:GO:0000932
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001234 GO:GO:0008026 eggNOG:COG0513 KO:K12614
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_003716556.1
GeneID:2676879 KEGG:mgr:MGG_03388 OrthoDB:EOG4QJVWF Uniprot:A4R715
Length = 535
Score = 715 (256.8 bits), Expect = 1.3e-70, P = 1.3e-70
Identities = 149/368 (40%), Positives = 223/368 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ GL+ +LL GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L+
Sbjct: 49 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALET 108
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
++ + + Q L+L PTRELA Q +V + LG +LG+ V GGT++R+D L VH+
Sbjct: 109 INPKVSKIQCLILVPTRELAMQTSQVCKTLGKHLGINVMVTTGGTTLRDDILRLQDPVHI 168
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
VVGTPGR+ D+ + +F++DEAD++LS F I + Q P QV +FSA
Sbjct: 169 VVGTPGRILDLAGKNVADLSECPMFIMDEADKLLSIEFTPVIEQLLQFHPKDRQVMLFSA 228
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P E + K M P I + DELTL GI Q++ VE+++ K+ L L+ L I Q
Sbjct: 229 TFPISVKEFSDKNMTNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQ 286
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ +H M Q R+ + +FR+G R L+ +DLL R
Sbjct: 287 SIIFCNSTNRVELLAKKITELGYSCFYSHAKMQQQARNRVFHDFRNGVCRNLVCSDLLTR 346
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN ++ +D L++I++
Sbjct: 347 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLISWEDRFNLYNIERDLGTE 406
Query: 401 IEELPANV 408
I+ +P+ +
Sbjct: 407 IQPIPSTI 414
>TAIR|locus:2127043 [details] [associations]
symbol:RH8 "RNAhelicase-like 8" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0016032 "viral reproduction" evidence=IMP] [GO:0019048
"virus-host interaction" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0019048 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006417
GO:GO:0006397 GO:GO:0003723 EMBL:AF058919 EMBL:AL161472
GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 InterPro:IPR014014 PROSITE:PS51195 OMA:QFMEKHL
ProtClustDB:CLSN2683443 EMBL:AJ010460 EMBL:AY080837 EMBL:AY113985
IPI:IPI00531108 PIR:T01230 PIR:T51741 RefSeq:NP_191975.2
RefSeq:NP_849535.1 UniGene:At.25593 UniGene:At.67100
UniGene:At.71300 ProteinModelPortal:Q8RXK6 SMR:Q8RXK6 STRING:Q8RXK6
PaxDb:Q8RXK6 PRIDE:Q8RXK6 EnsemblPlants:AT4G00660.1
EnsemblPlants:AT4G00660.2 GeneID:828042 KEGG:ath:AT4G00660
GeneFarm:919 TAIR:At4g00660 InParanoid:Q8RXK6 PhylomeDB:Q8RXK6
Genevestigator:Q8RXK6 GermOnline:AT4G00660 Uniprot:Q8RXK6
Length = 505
Score = 706 (253.6 bits), Expect = 1.1e-69, P = 1.1e-69
Identities = 143/368 (38%), Positives = 226/368 (61%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC +L++
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+D QA+++ PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 193 IDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPVHL 252
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+VGTPGR+ D+ ++ + + V+DEAD++LS+ F+ + + LP Q+ +FSA
Sbjct: 253 LVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQILMFSA 312
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P + +F+ P ++ DELTL+GI QF+ VE+ + K+ L L+ L I Q
Sbjct: 313 TFPVTVKDFKDRFLTNPY-VINLMDELTLKGITQFYAFVEERQ-KIHCLNTLFSKLQINQ 370
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 371 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 430
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 431 GIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 490
Query: 401 IEELPANV 408
I+++P ++
Sbjct: 491 IKQIPPHI 498
>TAIR|locus:2098886 [details] [associations]
symbol:AT3G61240 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006417 GO:GO:0006397 GO:GO:0003723
EMBL:AL137898 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AJ010464 EMBL:AY120712 EMBL:BT000038 IPI:IPI00548726
PIR:T47916 PIR:T51743 RefSeq:NP_191683.1 RefSeq:NP_974472.1
UniGene:At.20236 ProteinModelPortal:Q9M2E0 SMR:Q9M2E0 STRING:Q9M2E0
PaxDb:Q9M2E0 PRIDE:Q9M2E0 EnsemblPlants:AT3G61240.1
EnsemblPlants:AT3G61240.2 GeneID:825296 KEGG:ath:AT3G61240
GeneFarm:928 TAIR:At3g61240 InParanoid:Q9M2E0 OMA:PLAMDQR
PhylomeDB:Q9M2E0 ProtClustDB:CLSN2683443 Genevestigator:Q9M2E0
GermOnline:AT3G61240 Uniprot:Q9M2E0
Length = 498
Score = 704 (252.9 bits), Expect = 1.8e-69, P = 1.8e-69
Identities = 144/368 (39%), Positives = 224/368 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ +LL+GIY GFEKPS IQ+ I G D++ +A++GTGKT FC +L++
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L VH+
Sbjct: 186 IDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHL 245
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+VGTPGR+ D+ ++ + + V+DEAD++LS F+ + ++ Q LP Q +FSA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSA 305
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P + + KP ++ D+LTL G+ Q++ VE+ + K+ L L+ L I Q
Sbjct: 306 TFPVTVKAFKDRHLRKPY-VINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQINQ 363
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ H M Q+ R+ + EFR+G+ R L+ TDL R
Sbjct: 364 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTR 423
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D ++ ++
Sbjct: 424 GIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTE 483
Query: 401 IEELPANV 408
I+ +P+N+
Sbjct: 484 IKPIPSNI 491
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 700 (251.5 bits), Expect = 4.9e-69, P = 4.9e-69
Identities = 153/379 (40%), Positives = 227/379 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 97
+F+ +GL LL+G+YA F KPS IQ++ + ++I Q+QSGTGKTA F +
Sbjct: 151 SFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFSLTM 210
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSG 157
L ++D + Q L L+PTRELA+Q +V+ +G + + V R S
Sbjct: 211 LSRVDPTIKMPQCLCLSPTRELARQTLEVITTMGKFTNITTQLVVPNAIPRGS----SVN 266
Query: 158 VHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVG 216
V+VGTPG D++RR+ L +++FVLDEAD ML ++G DQ + + LP +Q+
Sbjct: 267 AQVLVGTPGIAIDLIRRRQLNLSKMKVFVLDEADNMLEAQGLGDQAIRVKKALPRGVQLV 326
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT P E E + + + +K++EL ++GIKQ +++ E+ K E LC+LY L
Sbjct: 327 LFSATFPTEVREYAERLVPDANSLELKQEELNVDGIKQLYMDCRSEQHKFEVLCELYGLL 386
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
I S+IFV + D L KM+ HTVS HG +D RD ++ +FR G S+VLITT+
Sbjct: 387 TIGSSIIFVEKKETADVLYGKMKKEGHTVSVLHGGLDNTDRDRLIDDFREGRSKVLITTN 446
Query: 337 LLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDERM 389
+LARGID+ VS+V+NYD+PT P YLHRIGR+GRFGR GV+I+F+ R +
Sbjct: 447 VLARGIDIASVSMVVNYDMPTDKYGKPDPSTYLHRIGRTGRFGRVGVSISFIHDRRSYDI 506
Query: 390 LFDIQKFY-NVVIEELPAN 407
L I+ ++ NV + +P +
Sbjct: 507 LMAIKAYFGNVEMTRVPTD 525
>ASPGD|ASPL0000065093 [details] [associations]
symbol:AN7659 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0000822 "inositol hexakisphosphate binding" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0006406 "mRNA export from nucleus" evidence=IEA] [GO:0006415
"translational termination" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 EMBL:BN001304 EMBL:AACD01000130 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_680928.1 ProteinModelPortal:Q5AVM1
EnsemblFungi:CADANIAT00000783 GeneID:2869488 KEGG:ani:AN7659.2
OMA:PQAICLA OrthoDB:EOG4B2X5R Uniprot:Q5AVM1
Length = 477
Score = 696 (250.1 bits), Expect = 1.3e-68, P = 1.3e-68
Identities = 164/385 (42%), Positives = 237/385 (61%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGI 97
F+ +GL +L+G+ A F KPS IQ+R + P G +++ Q+QSGTGKTA F I
Sbjct: 71 FEDLGLDPRILQGLSAMNFRKPSKIQERAL-PLLMGNPPKNLVGQSQSGTGKTAAFVLNI 129
Query: 98 LQQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQR 152
L +LD + Q AL+LAPTRELA+QI V++ +G +L G+ + V + R
Sbjct: 130 LSRLDLSSEQAQKTPQALILAPTRELARQIVGVIQVMGKFLDGLHIGTAVPADTNARPTR 189
Query: 153 ILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPP 211
+ +S VVVGTPG V DM++++ + +++ VLDEAD ML + G DQ + LLP
Sbjct: 190 MEAS---VVVGTPGTVMDMIKKRIMVAAKLKVIVLDEADNMLDQQGLGDQCIRVKALLPR 246
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
IQV +FSAT P + KF + ++ +ELT+EGIKQ +++ EE K TL
Sbjct: 247 DIQVVLFSATFPAHVHQYASKFAPAANELTLQHEELTVEGIKQLYLDCASEEDKYRTLVQ 306
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY L + S+IFV TR + +M + HTV++ G ++ + RD I+ +FR+G ++V
Sbjct: 307 LYGLLTVGSSIIFVKTRASAVEIERRMVAEGHTVASLTGGIEGSQRDQIIDQFRAGHAKV 366
Query: 332 LITTDLLARGIDVQQVSLVINYDLPT--QPEN---------YLHRIGRSGRFGRKGVAIN 380
LITT++LARGIDV VS+VINYD+P QP N YLHRIGR+GRFGR GV+I+
Sbjct: 367 LITTNVLARGIDVSTVSMVINYDIPELHQPPNRPRQADFQTYLHRIGRTGRFGRVGVSIS 426
Query: 381 FVT-RDDERMLFDIQKFYNVVIEEL 404
FV+ R++ ML IQK++N I+ +
Sbjct: 427 FVSNREEWEMLNQIQKYFNTDIQRI 451
>TAIR|locus:2050715 [details] [associations]
symbol:AT2G45810 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005829
"cytosol" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006417 GO:GO:0006397
GO:GO:0003723 GO:GO:0000932 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC004665 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF ProtClustDB:CLSN2683443 EMBL:AY039862
EMBL:BT002709 EMBL:AJ010459 IPI:IPI00528597 PIR:T02466 PIR:T51740
RefSeq:NP_182105.1 UniGene:At.46 ProteinModelPortal:Q94BV4
SMR:Q94BV4 IntAct:Q94BV4 STRING:Q94BV4 PaxDb:Q94BV4 PRIDE:Q94BV4
EnsemblPlants:AT2G45810.1 GeneID:819189 KEGG:ath:AT2G45810
GeneFarm:917 TAIR:At2g45810 InParanoid:Q94BV4 PhylomeDB:Q94BV4
Genevestigator:Q94BV4 GermOnline:AT2G45810 Uniprot:Q94BV4
Length = 528
Score = 695 (249.7 bits), Expect = 1.7e-68, P = 1.7e-68
Identities = 145/366 (39%), Positives = 223/366 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ +LLRGIY GFEKPS IQ+ I G D++ +A++GTGKT FC L++
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+D QA++L PTRELA Q +V + L YL ++V GGTS+R+D L VH+
Sbjct: 216 IDPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHL 275
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+VGTPGR+ D+ ++ + + V+DEAD++LS F+ I ++ Q LP Q+ +FSA
Sbjct: 276 LVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSA 335
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P +++ KP I+ D+LTL G+ Q++ VE+ + K+ L L+ L I Q
Sbjct: 336 TFPVTVKSFKDRYLKKPY-IINLMDQLTLMGVTQYYAFVEERQ-KVHCLNTLFSKLQINQ 393
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 394 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTR 453
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E+YLHR+GRSGRFG G+A+N VT +D ++ ++
Sbjct: 454 GIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTE 513
Query: 401 IEELPA 406
I+ +P+
Sbjct: 514 IKPIPS 519
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 142/371 (38%), Positives = 225/371 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ++LL+ + + GFE+ + IQ I +G D+I QAQ+GTGKTA F +L
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++D Q +V+APTRELA Q+ + + +G + V++ GG + R L H
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R++LR N+ VLDEADEML+ GF + I I +P Q +FS
Sbjct: 123 IIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P I VK E+T+ I+QF++ V++++ K + L L + +
Sbjct: 183 ATMPDPIRRIAERFMTEPQHIKVKAKEVTMPNIQQFYLEVQEKK-KFDVLTRLLDIQSPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L++ + R + HGD+ Q R ++R+F+ GS VL+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVLVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+KG+A+ FVT + L +I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESGQLKNIERTTKR 361
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 362 KMDRMDAPTLD 372
>WB|WBGene00000479 [details] [associations]
symbol:cgh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0051729 "germline cell cycle switching, mitotic
to meiotic cell cycle" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007276 "gamete generation" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043186 "P granule" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017148 "negative regulation of translation"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 143/368 (38%), Positives = 224/368 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+ L QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L+ VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
V+ TPGR+ D++ + + ++ + VLDEAD++LS+ F+ + + LP + QV ++SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P +K M+KP I + +ELTL G+ Q++ V++++ K+ L L+ L I Q
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQEKQ-KVHCLNTLFRKLQINQ 282
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ ++V+ L K+ ++ H M QN R+ + +FR G+ R L+ +DLL R
Sbjct: 283 SIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTR 342
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++
Sbjct: 343 GIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTR 402
Query: 401 IEELPANV 408
IE +P V
Sbjct: 403 IEPIPKTV 410
>UNIPROTKB|Q95YF3 [details] [associations]
symbol:cgh-1 "ATP-dependent RNA helicase cgh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008340
GO:GO:0009792 GO:GO:0002009 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 GO:GO:0043066
GO:GO:0030154 GO:GO:0007052 GO:GO:0002119 GO:GO:0017148
GO:GO:0048477 GO:GO:0007283 GO:GO:0051729 GO:GO:0003723
GO:GO:0040035 GO:GO:0000932 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007276 GO:GO:0008026 EMBL:FO080423
RefSeq:NP_498646.1 ProteinModelPortal:Q95YF3 SMR:Q95YF3
DIP:DIP-25457N IntAct:Q95YF3 MINT:MINT-250782 STRING:Q95YF3
PaxDb:Q95YF3 EnsemblMetazoa:C07H6.5.1 EnsemblMetazoa:C07H6.5.2
GeneID:176061 KEGG:cel:CELE_C07H6.5 UCSC:C07H6.5.1 CTD:176061
WormBase:C07H6.5 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 InParanoid:Q95YF3 KO:K12614 OMA:YSHARMK
NextBio:890944 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
Uniprot:Q95YF3
Length = 430
Score = 690 (248.0 bits), Expect = 5.6e-68, P = 5.6e-68
Identities = 143/368 (38%), Positives = 224/368 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L +LL GI+ G+EKPS IQ+ I G D++ +A++GTGKT +C ++++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+ L QA+V+ PTRELA Q ++ L ++ +KV GGT +R+D L+ VH+
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
V+ TPGR+ D++ + + ++ + VLDEAD++LS+ F+ + + LP + QV ++SA
Sbjct: 165 VIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVMLYSA 224
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P +K M+KP I + +ELTL G+ Q++ V++++ K+ L L+ L I Q
Sbjct: 225 TFPNTVTSFMQKHMHKPYEINLM-EELTLLGVTQYYAFVQEKQ-KVHCLNTLFRKLQINQ 282
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ ++V+ L K+ ++ H M QN R+ + +FR G+ R L+ +DLL R
Sbjct: 283 SIIFCNSTQRVELLAKKITEIGYSCYYIHSKMAQNHRNRVFHDFRQGNCRNLVCSDLLTR 342
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGRFG GVAIN +T +D L I++
Sbjct: 343 GIDIQAVNVVINFDFPRNAETYLHRIGRSGRFGHLGVAINLITYEDRHTLRRIEQELRTR 402
Query: 401 IEELPANV 408
IE +P V
Sbjct: 403 IEPIPKTV 410
>UNIPROTKB|E1BDM8 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:DAAA02040478
EMBL:DAAA02040479 IPI:IPI00697295 RefSeq:NP_001137339.1
UniGene:Bt.12357 PRIDE:E1BDM8 Ensembl:ENSBTAT00000011952
GeneID:513906 KEGG:bta:513906 NextBio:20871085 Uniprot:E1BDM8
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>UNIPROTKB|E2RR01 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:AAEX03003444
RefSeq:XP_849975.1 Ensembl:ENSCAFT00000019743 GeneID:479414
KEGG:cfa:479414 NextBio:20854600 Uniprot:E2RR01
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>UNIPROTKB|P26196 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0004386 "helicase activity" evidence=TAS]
[GO:0003724 "RNA helicase activity" evidence=TAS] [GO:0016442
"RNA-induced silencing complex" evidence=IDA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IDA]
[GO:0000288 "nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016070 "RNA metabolic process" evidence=TAS] [GO:0016071 "mRNA
metabolic process" evidence=TAS] [GO:0043928 "exonucleolytic
nuclear-transcribed mRNA catabolic process involved in
deadenylation-dependent decay" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
GO:GO:0010467 GO:GO:0003723 GO:GO:0000932 GO:GO:0016442
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0010494
GO:GO:0033962 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
KO:K12614 OMA:YSHARMK GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043928 HOVERGEN:HBG106685 OrthoDB:EOG4J1182
EMBL:Z11685 EMBL:BC065007 EMBL:D17532 IPI:IPI00030320 PIR:S22651
RefSeq:NP_001244120.1 RefSeq:NP_004388.2 UniGene:Hs.408461 PDB:1VEC
PDB:2WAX PDB:2WAY PDBsum:1VEC PDBsum:2WAX PDBsum:2WAY
ProteinModelPortal:P26196 SMR:P26196 DIP:DIP-29195N IntAct:P26196
STRING:P26196 PhosphoSite:P26196 DMDM:116241327
DOSAC-COBS-2DPAGE:P26196 PaxDb:P26196 PeptideAtlas:P26196
PRIDE:P26196 DNASU:1656 Ensembl:ENST00000264018
Ensembl:ENST00000526070 Ensembl:ENST00000534980 GeneID:1656
KEGG:hsa:1656 UCSC:uc001pub.2 CTD:1656 GeneCards:GC11M118654
HGNC:HGNC:2747 HPA:CAB004668 HPA:HPA024201 HPA:HPA026644 MIM:600326
neXtProt:NX_P26196 PharmGKB:PA27229 InParanoid:P26196
PhylomeDB:P26196 ChiTaRS:DDX6 EvolutionaryTrace:P26196
GenomeRNAi:1656 NextBio:6820 ArrayExpress:P26196 Bgee:P26196
CleanEx:HS_DDX6 Genevestigator:P26196 GermOnline:ENSG00000110367
Uniprot:P26196
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>UNIPROTKB|F1SAJ5 [details] [associations]
symbol:DDX6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0010494 "cytoplasmic stress granule"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 CTD:1656 EMBL:FP089499
RefSeq:XP_003129962.1 RefSeq:XP_003357372.1 UniGene:Ssc.97711
Ensembl:ENSSSCT00000016463 GeneID:100515499 KEGG:ssc:100515499
Uniprot:F1SAJ5
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>MGI|MGI:104976 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 6"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=ISO] [GO:0016442 "RNA-induced silencing complex"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:104976 GO:GO:0005524
GO:GO:0003723 GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962
GO:GO:0008026 eggNOG:COG0513 GeneTree:ENSGT00530000063986
HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG106685 OrthoDB:EOG4J1182 CTD:1656
EMBL:D50494 EMBL:AK054144 EMBL:AK148483 EMBL:BC021452 EMBL:AF038995
IPI:IPI00109932 RefSeq:NP_001104296.1 RefSeq:NP_031867.1
RefSeq:NP_851841.2 UniGene:Mm.267061 ProteinModelPortal:P54823
SMR:P54823 IntAct:P54823 STRING:P54823 PhosphoSite:P54823
PaxDb:P54823 PRIDE:P54823 Ensembl:ENSMUST00000170489 GeneID:13209
KEGG:mmu:13209 UCSC:uc009pdy.2 InParanoid:P54823 NextBio:283376
Bgee:P54823 CleanEx:MM_DDX6 Genevestigator:P54823
GermOnline:ENSMUSG00000032097 Uniprot:P54823
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>RGD|1564560 [details] [associations]
symbol:Ddx6 "DEAD (Asp-Glu-Ala-Asp) box helicase 6"
species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA;ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA;ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA;ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1564560
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CH473975 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4J1182 CTD:1656
IPI:IPI00558056 RefSeq:NP_001102762.1 UniGene:Rn.231713
Ensembl:ENSRNOT00000017391 GeneID:500988 KEGG:rno:500988
UCSC:RGD:1564560 NextBio:707903 Uniprot:D3ZD73
Length = 483
Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
Identities = 143/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + D++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 142/365 (38%), Positives = 222/365 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
FD + L+ +LLRGI+ G+ KPS IQ++ I G D++ +A++GTGKTA+F L++
Sbjct: 51 FDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMARAKNGTGKTASFLIPALEK 110
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
D Q L+L PTRELA Q +V + LG Y+ V+V A GGTS+++D L + VH+
Sbjct: 111 TDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNVQVMASTGGTSLKDDIMRLYNPVHI 170
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+V TPGRV D+ ++ N ++DEAD++LS+ F+ + + LP + Q+ +FSA
Sbjct: 171 LVATPGRVLDLAQKNVANLSNCHTMIMDEADKLLSQEFQPLVEQLINFLPQQRQILLFSA 230
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P ++ + I + +ELTL+G+ Q++ VE+ + K+ L L+ L I Q
Sbjct: 231 TFPVTVKSFKEHYLQQAFEINLM-EELTLKGVTQYYAFVEERQ-KIHCLNTLFSKLQINQ 288
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ H M Q R+ + +FR+G+ R L+++DL R
Sbjct: 289 SIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHDFRNGACRNLVSSDLFTR 348
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L+ I++
Sbjct: 349 GIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLITYEDRFSLYKIEQELGTE 408
Query: 401 IEELP 405
I+ +P
Sbjct: 409 IKPIP 413
>ZFIN|ZDB-GENE-030131-6611 [details] [associations]
symbol:wu:fk48d07 "wu:fk48d07" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-6611 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 OMA:HIDPARF EMBL:CR391937 IPI:IPI00901625
RefSeq:XP_001340860.1 UniGene:Dr.104819 UniGene:Dr.127773
Ensembl:ENSDART00000114495 GeneID:100007313 KEGG:dre:100007313
NextBio:20787456 Uniprot:E7F1G8
Length = 483
Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
Identities = 144/369 (39%), Positives = 225/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 90 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 149
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
+D QA+VL PTRELA Q+ ++ + +LG +KV A GGT++R+D L VH
Sbjct: 150 IDLKKDYIQAIVLVPTRELALQVSQISINMSKHLGGIKVMATTGGTNLRDDIMRLDEIVH 209
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
V++ TPGR+ D++++ + D +++ V+DEAD++LS+ F I DI LP K Q+ ++S
Sbjct: 210 VIIATPGRILDLIKKGVAKVDKVQMAVMDEADKLLSQDFVVLIEDIISFLPKKRQILLYS 269
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + K + KP I + DELTL+GI Q++ V + + K+ L L+ L I
Sbjct: 270 ATFPISVQKFMTKHLQKPYEINLM-DELTLKGITQYYAYVTERQ-KVHCLNTLFSRLQIN 327
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 328 QSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFT 387
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L I+
Sbjct: 388 RGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITSEDRFNLKGIEDQLMT 447
Query: 400 VIEELPANV 408
I+ +P+++
Sbjct: 448 DIKPIPSSI 456
>UNIPROTKB|Q5ZKB9 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IEA] [GO:0010494 "cytoplasmic stress
granule" evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0000932 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010494 GO:GO:0033962 GO:GO:0008026
eggNOG:COG0513 GeneTree:ENSGT00530000063986 HOGENOM:HOG000268797
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 HSSP:P26196
EMBL:AJ720165 IPI:IPI00595692 UniGene:Gga.2331
ProteinModelPortal:Q5ZKB9 SMR:Q5ZKB9 Ensembl:ENSGALT00000012405
HOVERGEN:HBG106685 InParanoid:Q5ZKB9 OrthoDB:EOG4J1182
ArrayExpress:Q5ZKB9 Uniprot:Q5ZKB9
Length = 483
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 142/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + +++++ VLDEAD++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>POMBASE|SPBC776.09 [details] [associations]
symbol:ste13 "ATP-dependent RNA helicase Ste13"
species:4896 "Schizosaccharomyces pombe" [GO:0000290
"deadenylation-dependent decapping of nuclear-transcribed mRNA"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006417 "regulation of translation"
evidence=IEA] [GO:0030996 "cell cycle arrest in response to
nitrogen starvation" evidence=IMP] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IMP] [GO:0051028
"mRNA transport" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBC776.09
GO:GO:0005524 GO:GO:0006417 EMBL:CU329671 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0000932 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0031142 eggNOG:COG0513 HOGENOM:HOG000268797 KO:K12614
OMA:YSHARMK InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000290
OrthoDB:EOG4QJVWF EMBL:D29795 PIR:S46654 RefSeq:NP_596324.1
ProteinModelPortal:Q09181 SMR:Q09181 STRING:Q09181 PRIDE:Q09181
EnsemblFungi:SPBC776.09.1 GeneID:2541216 KEGG:spo:SPBC776.09
NextBio:20802328 GO:GO:0030996 Uniprot:Q09181
Length = 485
Score = 681 (244.8 bits), Expect = 5.1e-67, P = 5.1e-67
Identities = 146/368 (39%), Positives = 218/368 (59%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ GFE+PS IQ+ I G D++ +A++GTGKTA F L++
Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEK 105
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+D + Q L+L PTRELA Q +V + LG ++ VKV GGT++R+D L+ VH+
Sbjct: 106 VDTKKSKIQTLILVPTRELALQTSQVCKTLGKHMNVKVMVTTGGTTLRDDIIRLNDTVHI 165
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
VVGTPGRV D+ + FV+DEAD++LS F I + P Q+ ++SA
Sbjct: 166 VVGTPGRVLDLAGKGVADFSECTTFVMDEADKLLSPEFTPIIEQLLSYFPKNRQISLYSA 225
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P K +NKP I + DELTL G+ Q++ V++ + K+ L L+ L I Q
Sbjct: 226 TFPLIVKNFMDKHLNKPYEINLM-DELTLRGVTQYYAFVDESQ-KVHCLNTLFSKLQINQ 283
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ +H M Q+ R+ + FR+G R L+ +DLL R
Sbjct: 284 SIIFCNSTNRVELLAKKITELGYSCFYSHAKMLQSHRNRVFHNFRNGVCRNLVCSDLLTR 343
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGRFG +G+AI+F++ D L+ I+
Sbjct: 344 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHRGLAISFISWADRFNLYRIENELGTE 403
Query: 401 IEELPANV 408
I+ +P ++
Sbjct: 404 IQPIPPSI 411
>UNIPROTKB|P54824 [details] [associations]
symbol:ddx6 "ATP-dependent RNA helicase ddx6" species:8355
"Xenopus laevis" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003723
GO:GO:0030529 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG106685 CTD:1656 EMBL:X92421 EMBL:BC170228 EMBL:BC170230
RefSeq:NP_001083721.1 UniGene:Xl.157 IntAct:P54824 PRIDE:P54824
GeneID:399080 KEGG:xla:399080 Xenbase:XB-GENE-922237 Uniprot:P54824
Length = 481
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 144/370 (38%), Positives = 226/370 (61%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 97 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 156
Query: 101 LDYGLVEC-QALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGV 158
LD +C QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L V
Sbjct: 157 LDLKK-DCIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTV 215
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
HVV+ TPGR+ D++++ + D+I++ VLDEAD++LS+ F + DI LP Q+ ++
Sbjct: 216 HVVIATPGRILDLIKKGVAKVDHIQMIVLDEADKLLSQDFMQIMEDIIMTLPKNRQILLY 275
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 276 SATFPLSVQKFMTLHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQI 333
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 334 NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLF 393
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 394 TRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLG 453
Query: 399 VVIEELPANV 408
I+ +P+++
Sbjct: 454 TEIKPIPSSI 463
>UNIPROTKB|E1C8R1 [details] [associations]
symbol:DDX6 "Probable ATP-dependent RNA helicase DDX6"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 KO:K12614 InterPro:IPR014014
PROSITE:PS51195 UniGene:Gga.2331 CTD:1656 EMBL:AADN02058042
EMBL:AADN02058043 IPI:IPI00818395 RefSeq:NP_001006319.2
PRIDE:E1C8R1 Ensembl:ENSGALT00000040594 GeneID:419783
KEGG:gga:419783 NextBio:20822787 ArrayExpress:E1C8R1 Uniprot:E1C8R1
Length = 483
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 141/369 (38%), Positives = 224/369 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 98 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 157
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGVH 159
LD QA+V+ PTRELA Q+ ++ + ++G KV A GGT++R+D L VH
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+ TPGR+ D++++ + +++++ VLDEA+++LS+ F + DI LP Q+ ++S
Sbjct: 218 VVIATPGRILDLIKKGVAKVEHVQMIVLDEANKLLSQDFVQIMEDIILTLPKNRQILLYS 277
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 278 ATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQIN 335
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 336 QSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFT 395
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 396 RGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGT 455
Query: 400 VIEELPANV 408
I+ +P+N+
Sbjct: 456 EIKPIPSNI 464
>ASPGD|ASPL0000036135 [details] [associations]
symbol:AN10417 species:162425 "Emericella nidulans"
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0030996 "cell
cycle arrest in response to nitrogen starvation" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0000290 "deadenylation-dependent decapping of
nuclear-transcribed mRNA" evidence=IEA] [GO:0031142 "induction of
conjugation upon nitrogen starvation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:BN001306 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:HIDPARF
EnsemblFungi:CADANIAT00009573 Uniprot:C8VHA5
Length = 498
Score = 677 (243.4 bits), Expect = 1.3e-66, P = 1.3e-66
Identities = 147/368 (39%), Positives = 214/368 (58%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ ++ L+ GI+ GFEKPS IQ+ I G D++ +A++GTGKTA F L++
Sbjct: 41 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLER 100
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
++ + QAL+L PTRELA Q V + LG +LG+ V GGT + +D L+ VH+
Sbjct: 101 INPKSTKTQALILVPTRELALQTSHVCKTLGKHLGINVMVTTGGTGLMDDIIRLNDAVHI 160
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+VGTPGRV D+ + FV+DEAD++LS F I + P QV +FSA
Sbjct: 161 LVGTPGRVLDLASKGVADLSECPTFVMDEADKLLSPEFTPVIEQLLSFHPKDRQVMLFSA 220
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P + M P I + DELTL GI Q++ VE+++ K+ L L+ L I Q
Sbjct: 221 TFPMIVKSFKDRHMRNPYEINLM-DELTLRGITQYYAFVEEKQ-KVHCLNTLFSKLQINQ 278
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ +V+ L K+ ++ +H M Q R+ + +FR+G R L+ +DLL R
Sbjct: 279 SIIFCNSTNRVELLAKKITELGYSCFYSHARMLQQHRNRVFHDFRNGVCRNLVCSDLLTR 338
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN + DD L+ I++
Sbjct: 339 GIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLINWDDRFNLYKIEQELGTE 398
Query: 401 IEELPANV 408
I+ +P N+
Sbjct: 399 IQPIPQNI 406
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 150/376 (39%), Positives = 215/376 (57%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL ENLLR + G+EKP+ IQ I P G D++ QAQ+GTGKT F +L
Sbjct: 7 TFRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLN 66
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
++ Q LVLAPTRELA Q+ + + ++ V GG S+++ L G
Sbjct: 67 KVTSQTTP-QILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQLNALKRGP 125
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
V+VGTPGRV D +RR +L+ + ++ VLDEADEML GF D I I + PP+ Q+ +F
Sbjct: 126 QVIVGTPGRVMDHMRRGTLKLETLQALVLDEADEMLKMGFIDDIEWILEHTPPQRQLALF 185
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SATMP + + K + I + T++ I+Q V V + KLE L + E
Sbjct: 186 SATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQVSQHN-KLEALVRVLEVENT 244
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
+IFV TR L +K+ +R + S HGDM+Q R+ + + ++G +LI TD+
Sbjct: 245 EGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNGKLDILIATDVA 304
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARG+DV+++ V+NYD+P E Y+HRIGR+GR GR G+AI FVT + RML I++ N
Sbjct: 305 ARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTSREMRMLRTIERATN 364
Query: 399 VVIEEL----PANVAD 410
I + P VA+
Sbjct: 365 SRISPMKVPSPETVAE 380
>POMBASE|SPBC12C2.06 [details] [associations]
symbol:SPBC12C2.06 "cytoplasmic ATP-dependent RNA
helicase Dbp5 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0002184 "cytoplasmic translational termination" evidence=NAS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006415 "translational
termination" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC12C2.06 GO:GO:0005829 GO:GO:0005524
GO:GO:0005635 GO:GO:0015031 EMBL:CU329671 GO:GO:0031965
GO:GO:0005643 GenomeReviews:CU329671_GR GO:GO:0003723 GO:GO:0006406
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
PIR:T39375 RefSeq:NP_596016.1 PDB:3FHO PDBsum:3FHO
ProteinModelPortal:Q09747 STRING:Q09747 PRIDE:Q09747
EnsemblFungi:SPBC12C2.06.1 GeneID:2539975 KEGG:spo:SPBC12C2.06
EvolutionaryTrace:Q09747 NextBio:20801118 GO:GO:0002184
Uniprot:Q09747
Length = 503
Score = 673 (242.0 bits), Expect = 3.6e-66, P = 3.6e-66
Identities = 152/378 (40%), Positives = 230/378 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 97
+F+ + L+ LL+GIY+ F+KPS IQ++ + ++I Q+QSGTGKTA F +
Sbjct: 115 SFEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTM 174
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSG 157
L ++D + + QA+ LAP+RELA+QI V+ +G Y VK + SV + +I
Sbjct: 175 LSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYTEVKTAFGIKD-SVPKGAKI---D 230
Query: 158 VHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPPKIQVG 216
+V+GTPG V D+++R+ L +I++FVLDEAD ML + G DQ I LLP Q+
Sbjct: 231 AQIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLDQQGLGDQSMRIKHLLPRNTQIV 290
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT + +F I +K +EL++EGIKQ +++ + EE K L +LY L
Sbjct: 291 LFSATFSERVEKYAERFAPNANEIRLKTEELSVEGIKQLYMDCQSEEHKYNVLVELYGLL 350
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
I QS+IF + + + +M + HTV+ G+++ RD IM FR G+S+VL+TT+
Sbjct: 351 TIGQSIIFCKKKDTAEEIARRMTADGHTVACLTGNLEGAQRDAIMDSFRVGTSKVLVTTN 410
Query: 337 LLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDERM 389
++ARGIDV QV+LV+NYD+P P+ YLHRIGR+GRFGR GV+INFV +
Sbjct: 411 VIARGIDVSQVNLVVNYDMPLDQAGRPDPQTYLHRIGRTGRFGRVGVSINFVHDKKSWEE 470
Query: 390 LFDIQKFYNVVIEELPAN 407
+ IQ+++ I +P +
Sbjct: 471 MNAIQEYFQRPITRVPTD 488
>SGD|S000005572 [details] [associations]
symbol:DBP5 "Cytoplasmic ATP-dependent RNA helicase of the
DEAD-box family" species:4932 "Saccharomyces cerevisiae"
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0005934 "cellular bud tip" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IEA;IPI] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IDA] [GO:0006406 "mRNA
export from nucleus" evidence=IGI;IMP] [GO:0003724 "RNA helicase
activity" evidence=ISS;IDA] [GO:0005844 "polysome" evidence=IDA]
[GO:0006415 "translational termination" evidence=IGI;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000822 "inositol hexakisphosphate
binding" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000005572 GO:GO:0005524
GO:GO:0005737 EMBL:BK006948 GO:GO:0005934 GO:GO:0015031
GO:GO:0031965 GO:GO:0003723 GO:GO:0006406 GO:GO:0005844
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA OrthoDB:EOG4B2X5R
EMBL:U28135 EMBL:Z74954 EMBL:Z74955 PIR:S66920 RefSeq:NP_014689.1
PDB:2KBE PDB:2KBF PDB:3GFP PDB:3PEU PDB:3PEV PDB:3PEW PDB:3PEY
PDB:3RRM PDB:3RRN PDBsum:2KBE PDBsum:2KBF PDBsum:3GFP PDBsum:3PEU
PDBsum:3PEV PDBsum:3PEW PDBsum:3PEY PDBsum:3RRM PDBsum:3RRN
ProteinModelPortal:P20449 SMR:P20449 DIP:DIP-2352N IntAct:P20449
MINT:MINT-488024 STRING:P20449 PaxDb:P20449 PeptideAtlas:P20449
EnsemblFungi:YOR046C GeneID:854211 KEGG:sce:YOR046C CYGD:YOR046c
GeneTree:ENSGT00530000063236 EvolutionaryTrace:P20449
NextBio:976065 Genevestigator:P20449 GermOnline:YOR046C
GO:GO:0044614 GO:GO:0008186 GO:GO:0006415 Uniprot:P20449
Length = 482
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 150/379 (39%), Positives = 234/379 (61%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 97
+FD +GL LL+GIYA F+KPS IQ+R + ++I Q+QSGTGKTA F +
Sbjct: 93 SFDELGLAPELLKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTM 152
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSG 157
L +++ QA+ LAP+RELA+Q +V++ +G + + V S ++++I
Sbjct: 153 LTRVNPEDASPQAICLAPSRELARQTLEVVQEMGKFTKITSQLIVPD-SFEKNKQI---N 208
Query: 158 VHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPPKIQVG 216
V+VGTPG V D++RR+ ++ I+IFVLDEAD ML + G DQ + + LP Q+
Sbjct: 209 AQVIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLV 268
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT + +K + + ++ +E+ ++ IKQ +++ + E K + L +LY +
Sbjct: 269 LFSATFADAVRQYAKKIVPNANTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLM 328
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
I S+IFV T++ + L K++S H VS HGD+ RD ++ +FR G S+VLITT+
Sbjct: 329 TIGSSIIFVATKKTANVLYGKLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTN 388
Query: 337 LLARGIDVQQVSLVINYDLPT------QPENYLHRIGRSGRFGRKGVAINFV-TRDDERM 389
+LARGID+ VS+V+NYDLPT P Y+HRIGR+GRFGRKGVAI+FV ++ +
Sbjct: 389 VLARGIDIPTVSMVVNYDLPTLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNSFNI 448
Query: 390 LFDIQKFY-NVVIEELPAN 407
L IQK++ ++ + +P +
Sbjct: 449 LSAIQKYFGDIEMTRVPTD 467
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 668 (240.2 bits), Expect = 1.2e-65, P = 1.2e-65
Identities = 139/356 (39%), Positives = 217/356 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL + +++ I GFE+ + IQ + I + DVI QAQ+GTGKTA F I++
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+++ QALV+APTRELA Q+ + + +G V+V GG + R L H
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
V+VGTPGR+ D + R +LR +++ VLDEADEML+ GF + I I +P + Q +FS
Sbjct: 123 VIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FMN+P + VK E+T+ I+Q+++ V +++ K + L L + A
Sbjct: 183 ATMPDPIRRIAERFMNEPELVKVKAKEMTVPNIQQYYLEVHEKK-KFDILTRLLDIQAPE 241
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L + + R + HGD+ Q R ++R+F+ G+ +L+ TD+ A
Sbjct: 242 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVATDVAA 301
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ GVA+ FVT + L I++
Sbjct: 302 RGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREIGQLHHIER 357
>UNIPROTKB|F1MUT6 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 EMBL:DAAA02045970
IPI:IPI00704706 UniGene:Bt.37736 Ensembl:ENSBTAT00000004644
OMA:KMSMNIL Uniprot:F1MUT6
Length = 484
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 150/384 (39%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L Q++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 157 MLSQVEPANRHPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 216
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 217 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC++Y
Sbjct: 274 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 334 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 394 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 453
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 454 MNILNRIQEHFNKKIERLDTDDLD 477
>UNIPROTKB|F1S432 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:HETIFEV
EMBL:CU929739 Ensembl:ENSSSCT00000003016 Uniprot:F1S432
Length = 481
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 151/384 (39%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 95 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 153
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L Q++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 154 MLSQVEPANRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 213
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 214 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 270
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 271 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 330
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 331 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 390
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 391 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 450
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 451 MNILNRIQEHFNKKIERLDTDDLD 474
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 135/356 (37%), Positives = 216/356 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF L +L++ I GFE+ + IQ + I DVI QAQ+GTGKTA F +++
Sbjct: 4 TFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+++ QA+V+APTRELA Q+ + + +G KV GG + R L +
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPN 123
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R+++R +N+ V+DEADEML+ GF D I I +P + Q +FS
Sbjct: 124 IIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQTLLFS 183
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM +P + VK E+T+ I+QF++ V++ + K +TL L + +
Sbjct: 184 ATMPAPIKRIAERFMTEPEHVKVKAKEMTVSNIQQFYLEVQERK-KFDTLTRLLDIQSPE 242
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD L + + R + HGD+ Q R + +R+F+ G+ VL+ TD+ A
Sbjct: 243 LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVLVATDVAA 302
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T ++ ML I++
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKSMLRAIEQ 358
>MGI|MGI:1353582 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 25"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISO] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IDA]
[GO:0051028 "mRNA transport" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1353582 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:29118
OrthoDB:EOG4NS3BD OMA:WHFAERI ChiTaRS:DDX25 EMBL:AF142630
EMBL:AY380091 EMBL:AY380080 EMBL:AY380081 EMBL:AY380082
EMBL:AY380083 EMBL:AY380084 EMBL:AY380085 EMBL:AY380086
EMBL:AY380087 EMBL:AY380088 EMBL:AY380089 EMBL:AY380090
EMBL:AK050693 EMBL:AK078340 EMBL:BC024852 EMBL:BC061130
IPI:IPI00135420 IPI:IPI00759935 RefSeq:NP_038960.2
UniGene:Mm.291723 ProteinModelPortal:Q9QY15 SMR:Q9QY15
STRING:Q9QY15 PhosphoSite:Q9QY15 PaxDb:Q9QY15 PRIDE:Q9QY15
Ensembl:ENSMUST00000034612 GeneID:30959 KEGG:mmu:30959
UCSC:uc012gqi.1 InParanoid:Q9QY15 NextBio:307448 Bgee:Q9QY15
CleanEx:MM_DDX25 Genevestigator:Q9QY15
GermOnline:ENSMUSG00000032101 Uniprot:Q9QY15
Length = 484
Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
Identities = 150/385 (38%), Positives = 231/385 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 99 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 157
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 158 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTEVTK 217
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 218 Q---IIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 274
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V E + K + LC++Y
Sbjct: 275 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKGKYQALCNIY 334
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 335 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 394
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 395 TTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 454
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ +N I++L P ++ ++
Sbjct: 455 PLLMKIQDHFNSNIKQLDPEDMDEI 479
>RGD|68381 [details] [associations]
symbol:Ddx25 "DEAD (Asp-Glu-Ala-Asp) box helicase 25"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=ISO;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO;ISS] [GO:0006417 "regulation of translation"
evidence=IEA;ISO;ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA;ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0033391 "chromatoid body" evidence=IEA;ISO;ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:68381
GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF142629 IPI:IPI00213497 IPI:IPI00760145 IPI:IPI00760150
RefSeq:NP_113818.2 UniGene:Rn.224821 ProteinModelPortal:Q9QY16
SMR:Q9QY16 STRING:Q9QY16 PRIDE:Q9QY16 GeneID:58856 KEGG:rno:58856
UCSC:RGD:68381 InParanoid:Q9QY16 NextBio:611449 ArrayExpress:Q9QY16
Genevestigator:Q9QY16 GermOnline:ENSRNOG00000012260 Uniprot:Q9QY16
Length = 483
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 151/385 (39%), Positives = 231/385 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLNRVNALELFPQCLCLAPTYELALQTGRVVERMGKFCVDVEVMYAIRGNRIPRGTDVTK 216
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 217 Q---IVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V E + K + LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCENRKDKYQALCNIY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQSEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ +N I++L P ++ ++
Sbjct: 454 PLLMKIQDHFNSSIKQLDPEDMDEI 478
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 658 (236.7 bits), Expect = 1.4e-64, P = 1.4e-64
Identities = 138/371 (37%), Positives = 218/371 (58%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF L +L + I GFE+ + IQ + I DVI QAQ+GTGKTA F +++
Sbjct: 4 TFQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVE 63
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+++ QA+V+APTRELA Q+ + + +G +V GG + R L H
Sbjct: 64 KINPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALKKNPH 123
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D + R+++R + VLDEADEML+ GF + I I +P + Q +FS
Sbjct: 124 IIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQTLLFS 183
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMP I +FM P + VK E+T+ I+QF++ V + + K +TL L + +
Sbjct: 184 ATMPAPIKRIAERFMTNPEHVKVKAKEMTVSNIQQFYLEVHERK-KFDTLTRLLDIQSPE 242
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+++F T+R+VD LT+ + R +T HGD+ Q R + +R+F+ G+ VL+ TD+ A
Sbjct: 243 LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAA 302
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ V+ V N+D+P PE+Y+HRIGR+GR G+ G+A+ F+T ++ ML I++
Sbjct: 303 RGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPREKDMLRAIEQTTKR 362
Query: 400 VIEELPANVAD 410
++ + A D
Sbjct: 363 KMDRMKAPTLD 373
>ZFIN|ZDB-GENE-070912-83 [details] [associations]
symbol:ddx6 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
6" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-070912-83 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063986 InterPro:IPR014014 PROSITE:PS51195
EMBL:CR759774 IPI:IPI00505165 ProteinModelPortal:E7FD91
Ensembl:ENSDART00000087382 Bgee:E7FD91 Uniprot:E7FD91
Length = 485
Score = 657 (236.3 bits), Expect = 1.8e-64, P = 1.8e-64
Identities = 139/370 (37%), Positives = 223/370 (60%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G D++ +A++GTGK+ + +L++
Sbjct: 99 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLER 158
Query: 101 LDYGLVECQA-LVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGV 158
+D QA +V+ PTRELA Q+ ++ + ++G VKV A GGT++R+D L V
Sbjct: 159 IDLKKDSIQAAVVIVPTRELALQVSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETV 218
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
HVV+ TPGR+ D++++ + +++ VLDEAD++LS+ F + +I L + Q+ ++
Sbjct: 219 HVVIATPGRILDLIKKGVAKVGQVQMIVLDEADKLLSQDFVQMMEEILSSLSKQRQILLY 278
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SAT P + + KP I + +ELTL+G+ Q++ V + + K+ L L+ L I
Sbjct: 279 SATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQ-KVHCLNTLFSRLQI 336
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
QS+IF N+ ++V+ L K+ ++ H M Q R+ + +FR+G R L+ TDL
Sbjct: 337 NQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLF 396
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
RGID+Q V++VIN+D P E YLHRIGRSGRFG G+AIN +T DD L I++
Sbjct: 397 TRGIDIQAVNVVINFDFPKLGETYLHRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLG 456
Query: 399 VVIEELPANV 408
I+ +P+++
Sbjct: 457 TEIKPIPSSI 466
>UNIPROTKB|Q2TBP1 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0033391
"chromatoid body" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0007286 "spermatid
development" evidence=ISS] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 GO:GO:0007286
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q9UHL0
HOVERGEN:HBG107989 EMBL:BC109867 IPI:IPI00724449
RefSeq:NP_001033606.1 UniGene:Bt.14611 ProteinModelPortal:Q2TBP1
SMR:Q2TBP1 PRIDE:Q2TBP1 GeneID:508962 KEGG:bta:508962 CTD:29118
InParanoid:Q2TBP1 OrthoDB:EOG4NS3BD NextBio:20868762 Uniprot:Q2TBP1
Length = 483
Score = 655 (235.6 bits), Expect = 2.9e-64, P = 2.9e-64
Identities = 150/385 (38%), Positives = 232/385 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF+DQ I + LP +
Sbjct: 217 Q---IVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFEDQSIRIQRALPSEC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K + LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ +N I++L P ++ ++
Sbjct: 454 PLLMKIQDHFNSSIKQLDPEDMDEI 478
>UNIPROTKB|E2RR50 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
EMBL:AAEX03004077 RefSeq:XP_536790.2 ProteinModelPortal:E2RR50
Ensembl:ENSCAFT00000032061 GeneID:479658 KEGG:cfa:479658
NextBio:20854805 Uniprot:E2RR50
Length = 478
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 149/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>UNIPROTKB|H3BQK0 [details] [associations]
symbol:DDX19B "HCG1998531, isoform CRA_g" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:CH471241 EMBL:AC012184 HGNC:HGNC:2742
ChiTaRS:DDX19B SMR:H3BQK0 Ensembl:ENST00000563206 Uniprot:H3BQK0
Length = 484
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 150/384 (39%), Positives = 228/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L Q++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 157 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 216
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 217 Q---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 274 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 334 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 394 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 453
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 454 MNILNRIQEHFNKKIERLDTDDLD 477
>UNIPROTKB|Q9UMR2 [details] [associations]
symbol:DDX19B "ATP-dependent RNA helicase DDX19B"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0006406 "mRNA export from nucleus" evidence=TAS]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0004386
GO:GO:0006406 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
OrthoDB:EOG46MBJK EMBL:CH471241 EMBL:AJ237946 EMBL:AF353720
EMBL:AL136639 EMBL:CR457215 EMBL:CR533509 EMBL:AK027378
EMBL:AK301938 EMBL:AK302107 EMBL:AK316346 EMBL:AC012184
EMBL:BC003626 EMBL:BC010008 IPI:IPI00008943 IPI:IPI00027599
IPI:IPI00556368 IPI:IPI00939593 RefSeq:NP_001014449.1
RefSeq:NP_001014451.1 RefSeq:NP_001244101.1 RefSeq:NP_001244102.1
RefSeq:NP_001244103.1 RefSeq:NP_009173.1 UniGene:Hs.221761 PDB:3EWS
PDB:3FHC PDB:3FHT PDB:3FMO PDB:3FMP PDB:3G0H PDBsum:3EWS
PDBsum:3FHC PDBsum:3FHT PDBsum:3FMO PDBsum:3FMP PDBsum:3G0H
ProteinModelPortal:Q9UMR2 SMR:Q9UMR2 DIP:DIP-48486N IntAct:Q9UMR2
MINT:MINT-1387516 STRING:Q9UMR2 PhosphoSite:Q9UMR2 DMDM:10719979
PaxDb:Q9UMR2 PRIDE:Q9UMR2 DNASU:11269 Ensembl:ENST00000288071
Ensembl:ENST00000355992 Ensembl:ENST00000393657
Ensembl:ENST00000451014 Ensembl:ENST00000563392
Ensembl:ENST00000568625 GeneID:11269 KEGG:hsa:11269 UCSC:uc002eyo.3
UCSC:uc002eyp.3 CTD:11269 GeneCards:GC16P070328 HGNC:HGNC:2742
HPA:CAB037284 MIM:605812 neXtProt:NX_Q9UMR2 PharmGKB:PA27208
InParanoid:Q9UMR2 OMA:HETIFEV PhylomeDB:Q9UMR2 ChiTaRS:DDX19B
EvolutionaryTrace:Q9UMR2 GenomeRNAi:11269 NextBio:42879
ArrayExpress:Q9UMR2 Bgee:Q9UMR2 CleanEx:HS_DDX19B
Genevestigator:Q9UMR2 GermOnline:ENSG00000157349 Uniprot:Q9UMR2
Length = 479
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 150/384 (39%), Positives = 228/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 93 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 151
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L Q++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 152 MLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 211
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 212 Q---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 268
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 269 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 328
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 329 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 388
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 389 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 448
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 449 MNILNRIQEHFNKKIERLDTDDLD 472
>RGD|1303136 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19A"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEP] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524 GO:GO:0006917
GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 149/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 208
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 209 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V E K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>RGD|1593382 [details] [associations]
symbol:Ddx19b "DEAD (Asp-Glu-Ala-As) box polypeptide 19B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1303136 RGD:1593382 GO:GO:0005524
GO:GO:0006917 GO:GO:0010043 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
CTD:55308 HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:BC079094
IPI:IPI00476885 RefSeq:NP_001005381.2 UniGene:Rn.228949 SMR:Q68FX3
Ensembl:ENSRNOT00000024793 GeneID:292022 KEGG:rno:292022
UCSC:RGD:1303136 NextBio:633623 Genevestigator:Q68FX3
Uniprot:Q68FX3
Length = 478
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 149/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 208
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 209 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V E K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>UNIPROTKB|E9PTL9 [details] [associations]
symbol:Ddx19b "Protein Ddx19b" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 RGD:1593382 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00959699
Ensembl:ENSRNOT00000059034 ArrayExpress:E9PTL9 Uniprot:E9PTL9
Length = 482
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 149/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 96 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PLMLAEPPQNLIAQSQSGTGKTAAFVLA 154
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 155 MLSRVEPADRHPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKV-- 212
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
G +V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 213 -GEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 271
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V E K + LC+LY
Sbjct: 272 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 331
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 332 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 391
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 392 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 451
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 452 MNILNRIQEHFNKKIERLDTDDLD 475
>UNIPROTKB|F1PIZ6 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:AAEX03003382 Ensembl:ENSCAFT00000016722 Uniprot:F1PIZ6
Length = 462
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 149/385 (38%), Positives = 231/385 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 77 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 135
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 136 MLSRVNTLELFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTK 195
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 196 Q---IIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSEC 252
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V E + K + LC++Y
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIY 312
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 372
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ RGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 373 TTNVSRRGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 432
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ +N I++L P ++ ++
Sbjct: 433 PLLMKIQDHFNSSIKQLDPEDMDEI 457
>UNIPROTKB|I3LC00 [details] [associations]
symbol:DDX19A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236
EMBL:CU929739 RefSeq:XP_003126917.1 Ensembl:ENSSSCT00000029799
GeneID:100524144 KEGG:ssc:100524144 Uniprot:I3LC00
Length = 478
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 149/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNRDEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>FB|FBgn0024804 [details] [associations]
symbol:Dbp80 "Dead box protein 80" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0044614 "nuclear pore
cytoplasmic filaments" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AF005239 ProteinModelPortal:O61305 SMR:O61305 PaxDb:O61305
PRIDE:O61305 FlyBase:FBgn0024804 InParanoid:O61305
OrthoDB:EOG4BCC38 Bgee:O61305 GermOnline:CG17023 Uniprot:O61305
Length = 460
Score = 652 (234.6 bits), Expect = 6.0e-64, P = 6.0e-64
Identities = 150/384 (39%), Positives = 230/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 97
TF+A+ L+ +LL+GIYA GF PS IQ+ + ++I Q+QSGTGKTA F +
Sbjct: 74 TFEALHLKASLLKGIYAMGFNTPSKIQETALPTLLADPPQNMIAQSQSGTGKTAAFVLAM 133
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSS 156
L +++ L Q L L+PT ELA Q +V +G + +K+ V G V ++I
Sbjct: 134 LSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRFAVRGEEVDRSKKIEE- 192
Query: 157 GVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKIQ 214
H+++GTPG++ D ++ + I +FVLDEAD M++ +G DQ I ++L P Q
Sbjct: 193 --HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCIRIHKMLNPHCQ 250
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+ FSAT E ++ R + P I + R+E +LE IKQ++V + EE K + ++Y
Sbjct: 251 MLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNAIQNIYG 310
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
+++ Q++IF +T+R WL KM S H+V+ GD+ R ++ FRSG +VLIT
Sbjct: 311 CISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLIT 370
Query: 335 TDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDER 388
T++L+RGID++Q+ +V+N+DLP E YLHRIGR+GRFG+ G+AIN +T D++
Sbjct: 371 TNILSRGIDIEQLQVVVNFDLPVDLDGMADCETYLHRIGRTGRFGKSGIAINLIT-DEKT 429
Query: 389 MLF--DIQKFYNVVIEELPANVAD 410
M DI+K +N IE L + AD
Sbjct: 430 MKVCSDIEKHFNKKIEVLNTDSAD 453
>UNIPROTKB|Q3ZBV2 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9913 "Bos taurus" [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 KO:K01529 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 EMBL:BC103093 IPI:IPI00788586
RefSeq:NP_001029743.1 UniGene:Bt.49612 HSSP:Q9UHL0
ProteinModelPortal:Q3ZBV2 SMR:Q3ZBV2 PRIDE:Q3ZBV2
Ensembl:ENSBTAT00000004645 GeneID:529929 KEGG:bta:529929 CTD:55308
HOVERGEN:HBG107989 InParanoid:Q3ZBV2 OMA:MMAINTI OrthoDB:EOG46MBJK
NextBio:20875139 ArrayExpress:Q3ZBV2 Uniprot:Q3ZBV2
Length = 478
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 148/384 (38%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q+I
Sbjct: 151 MLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISE 210
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
H+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 211 ---HIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC++Y
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>UNIPROTKB|F1RVF0 [details] [associations]
symbol:LOC100512980 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:ESATTFE
Ensembl:ENSSSCT00000012145 Uniprot:F1RVF0
Length = 462
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 150/385 (38%), Positives = 230/385 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 77 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 135
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 136 MLSRVNALELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITK 195
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+++GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP
Sbjct: 196 Q---IIIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGC 252
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K + LC++Y
Sbjct: 253 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 312
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 313 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLRGELTVDQRAAIIQRFRDGKEKVLI 372
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 373 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 432
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ +N I++L P ++ ++
Sbjct: 433 PLLMKIQDHFNSNIKQLDPEDMDEI 457
>UNIPROTKB|A4RBS3 [details] [associations]
symbol:SUB2 "ATP-dependent RNA helicase SUB2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM000230 EMBL:CM001237 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12812
RefSeq:XP_003720935.1 ProteinModelPortal:A4RBS3 SMR:A4RBS3
STRING:A4RBS3 PRIDE:A4RBS3 EnsemblFungi:MGG_02806T0 GeneID:2682359
KEGG:mgr:MGG_02806 OrthoDB:EOG4H49C6 Uniprot:A4RBS3
Length = 436
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 153/407 (37%), Positives = 229/407 (56%)
Query: 12 ARQFDARMNDLLGSDGQDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGI 70
A + + +L D SY ++ T F L+ LLR I GFE PS +QQ I
Sbjct: 24 AADSNGKKGELAAGGNVDKKGSYVGIHSTGFRDFLLKPELLRAIGDCGFEHPSEVQQTCI 83
Query: 71 VPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRAL 130
G D+I QA+SG GKTA F LQQ++ EC LV+ TRELA QI
Sbjct: 84 PQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRF 143
Query: 131 GDYL-GVKVHACVGGTSVREDQRILSSGV---HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ +K GGT +++D +L + H++VGTPGR+ ++R + LR ++RIFV
Sbjct: 144 SKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFV 203
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF+ P + QV +FSAT+ E I +KFM P V D
Sbjct: 204 LDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDED 263
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q+ V +E++E K L +L + L Q +IFV + + L +R +
Sbjct: 264 TKLTLHGLQQYFVALEEKE-KNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFP 322
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H + Q R +EF+ + R+ + TD+ RGID+++++L INYD+P ++YLH
Sbjct: 323 SIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLAINYDMPADADSYLH 382
Query: 365 RIGRSGRFGRKGVAINFVTRD-DERMLFDIQKFYNVVIEELPANVAD 410
R+GR+GRFG KG+A++FVT D D+ +L I+K + V I E P + D
Sbjct: 383 RVGRAGRFGTKGLAVSFVTNDQDKEVLTAIEKRFEVPIPEFPKDGID 429
>FB|FBgn0004419 [details] [associations]
symbol:me31B "maternal expression at 31B" species:7227
"Drosophila melanogaster" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS;NAS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=IDA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007095 "mitotic G2 DNA damage checkpoint"
evidence=IGI] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005875 GO:GO:0007095 EMBL:AE014134 GO:GO:0003723
GO:GO:0000932 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033962 GO:GO:0004004 eggNOG:COG0513
GeneTree:ENSGT00530000063986 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 EMBL:M59926 EMBL:AY051663
PIR:A39157 RefSeq:NP_523533.2 RefSeq:NP_723539.1 UniGene:Dm.2770
ProteinModelPortal:P23128 SMR:P23128 IntAct:P23128 MINT:MINT-769276
STRING:P23128 PaxDb:P23128 PRIDE:P23128 EnsemblMetazoa:FBtr0079975
GeneID:34364 KEGG:dme:Dmel_CG4916 CTD:34364 FlyBase:FBgn0004419
InParanoid:P23128 OrthoDB:EOG45QFVG PhylomeDB:P23128 ChiTaRS:me31B
GenomeRNAi:34364 NextBio:788139 Bgee:P23128 GermOnline:CG4916
Uniprot:P23128
Length = 459
Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
Identities = 139/365 (38%), Positives = 213/365 (58%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+E+PS IQ+ I G DV+ +A++GTGKT +C +L+Q
Sbjct: 60 FEEFCLKRELLMGIFEKGWERPSPIQEAAIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 119
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+D QALV+ PTRELA Q ++ L +L ++V GGT +++D + V +
Sbjct: 120 IDPTKDYIQALVMVPTRELALQTSQICIELAKHLDIRVMVTTGGTILKDDILRIYQKVQL 179
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
++ TPGR+ D++ ++ + RI VLDEAD++LS F+ + + LP Q+ +FSA
Sbjct: 180 IIATPGRILDLMDKKVADMSHCRILVLDEADKLLSLDFQGMLDHVILKLPKDPQILLFSA 239
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P K + +P I + +ELTL+G+ Q++ V++ + K+ L L+ L I Q
Sbjct: 240 TFPLTVKNFMEKHLREPYEINLM-EELTLKGVTQYYAFVQERQ-KVHCLNTLFSKLQINQ 297
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
S+IF N+ ++V+ L K+ + H M Q R+ + +FR G R L+ +DL R
Sbjct: 298 SIIFCNSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRQGLCRNLVCSDLFTR 357
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GIDVQ V++VIN+D P E YLHRIGRSGRFG G+AIN +T +D L I+K
Sbjct: 358 GIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFDLHRIEKELGTE 417
Query: 401 IEELP 405
I+ +P
Sbjct: 418 IKPIP 422
>UNIPROTKB|Q9NUU7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0010043
"response to zinc ion" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0003723 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:AK001988 EMBL:AK223262
EMBL:AL832970 EMBL:CH471241 EMBL:BC005162 EMBL:BC006544
EMBL:BC137496 EMBL:BC137497 IPI:IPI00019918 RefSeq:NP_060802.1
UniGene:Hs.656037 ProteinModelPortal:Q9NUU7 SMR:Q9NUU7
IntAct:Q9NUU7 MINT:MINT-1450935 STRING:Q9NUU7 PhosphoSite:Q9NUU7
DMDM:73919226 PaxDb:Q9NUU7 PeptideAtlas:Q9NUU7 PRIDE:Q9NUU7
DNASU:55308 Ensembl:ENST00000302243 GeneID:55308 KEGG:hsa:55308
UCSC:uc002eyv.3 GeneCards:GC16P070380 H-InvDB:HIX0038837
HGNC:HGNC:25628 HPA:HPA045252 neXtProt:NX_Q9NUU7
PharmGKB:PA134894996 InParanoid:Q9NUU7 PhylomeDB:Q9NUU7
GenomeRNAi:55308 NextBio:59538 ArrayExpress:Q9NUU7 Bgee:Q9NUU7
CleanEx:HS_DDX19A Genevestigator:Q9NUU7 GermOnline:ENSG00000168872
Uniprot:Q9NUU7
Length = 478
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 149/384 (38%), Positives = 228/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 151 MLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 210
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 211 Q---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>UNIPROTKB|Q9UHL0 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007286 "spermatid development" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006406 "mRNA export from
nucleus" evidence=ISS] [GO:0006417 "regulation of translation"
evidence=ISS] [GO:0033391 "chromatoid body" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0006417 EMBL:CH471065
GO:GO:0007286 GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 CTD:29118 OrthoDB:EOG4NS3BD
EMBL:AF155140 EMBL:AY735312 EMBL:AY735301 EMBL:AY735302
EMBL:AY735303 EMBL:AY735304 EMBL:AY735305 EMBL:AY735306
EMBL:AY735307 EMBL:AY735308 EMBL:AY735309 EMBL:AY735310
EMBL:AY735311 EMBL:AK312772 EMBL:BC035388 EMBL:BC050360
IPI:IPI00296139 IPI:IPI00759454 RefSeq:NP_037396.3
UniGene:Hs.420263 PDB:2RB4 PDBsum:2RB4 ProteinModelPortal:Q9UHL0
SMR:Q9UHL0 STRING:Q9UHL0 PhosphoSite:Q9UHL0 DMDM:61222937
PaxDb:Q9UHL0 PRIDE:Q9UHL0 Ensembl:ENST00000263576 GeneID:29118
KEGG:hsa:29118 UCSC:uc001qcz.4 GeneCards:GC11P125773
HGNC:HGNC:18698 HPA:HPA020090 HPA:HPA020137 MIM:607663
neXtProt:NX_Q9UHL0 PharmGKB:PA38644 InParanoid:Q9UHL0 OMA:WHFAERI
PhylomeDB:Q9UHL0 ChiTaRS:DDX25 EvolutionaryTrace:Q9UHL0
GenomeRNAi:29118 NextBio:52207 ArrayExpress:Q9UHL0 Bgee:Q9UHL0
CleanEx:HS_DDX25 Genevestigator:Q9UHL0 GermOnline:ENSG00000109832
Uniprot:Q9UHL0
Length = 483
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 151/383 (39%), Positives = 225/383 (58%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 157 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK 216
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRP-DNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+++GTPG V D + L IR+FVLDEAD M+ ++GF D I + LP +
Sbjct: 217 Q---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + P I ++++ELTL I+Q++V E + K + LC++Y
Sbjct: 274 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
++ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 334 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDEL 453
Query: 388 RMLFDIQKFYNVVIEELPANVAD 410
L IQ +N I++L A D
Sbjct: 454 PSLMKIQDHFNSSIKQLNAEDMD 476
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 144/365 (39%), Positives = 210/365 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
L+ + QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
+VVGTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMPP EI +F+ P + V T+ ++Q + V+ E K E + L ET
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETD 266
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
S++FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++A
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I++
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRS 386
Query: 400 VIEEL 404
+EE+
Sbjct: 387 SMEEI 391
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 648 (233.2 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 144/365 (39%), Positives = 210/365 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L +L + GF P+ IQ I +G D + +AQ+GTGKTA F +L +
Sbjct: 28 FSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNK 87
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
L+ + QA+V+APTRELA Q+ ++ LG + G+KV GG S+ + R L SG H
Sbjct: 88 LNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAH 147
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
+VVGTPGRV D++ R L D F+LDEADEML GF D + I + P Q +FS
Sbjct: 148 IVVGTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPESAQRVLFS 207
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMPP EI +F+ P + V T+ ++Q + V+ E K E + L ET
Sbjct: 208 ATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGVE-KDEAMARLLETEETD 266
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
S++FV TR+ + L D + +R +A HGD+ Q+ R+ + + G +L+ TD++A
Sbjct: 267 ASIVFVRTRQDTERLADWLCARGFKAAALHGDIPQSLRERTVDHIKQGVIDILVATDVVA 326
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+DV +++ V NYD+P E+Y+HRIGR+GR GRKG AI V + RML I++
Sbjct: 327 RGLDVPRITHVYNYDIPFDVESYIHRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRS 386
Query: 400 VIEEL 404
+EE+
Sbjct: 387 SMEEI 391
>GENEDB_PFALCIPARUM|PFC0915w [details] [associations]
symbol:PFC0915w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006200 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844502 HOGENOM:HOG000268797 KO:K12614 OMA:YSHARMK
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
ProtClustDB:CLSZ2429504 RefSeq:XP_001351278.1
ProteinModelPortal:O97285 SMR:O97285 EnsemblProtists:PFC0915w:mRNA
GeneID:814522 KEGG:pfa:PFC0915w EuPathDB:PlasmoDB:PF3D7_0320800
Uniprot:O97285
Length = 433
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 138/368 (37%), Positives = 217/368 (58%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ L+ LL GI+ G+EKPS IQ+ I G +++ +A++GTGKTA F +L++
Sbjct: 62 FEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLEK 121
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHV 160
+ Q L+L PTRELA Q +++ LG ++ V+ GGTS+RED L + VH+
Sbjct: 122 CNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVHI 181
Query: 161 VVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 220
+ GTPGR+ D+ + I V+DEAD++LS F+ + ++ + LP + Q+ ++SA
Sbjct: 182 LCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYSA 241
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T P E +++ I + DELTL+GI Q++ V KE K+ L L+ L I Q
Sbjct: 242 TFPVTVKEFRAIYLSDAHEINLM-DELTLKGITQYYAFV-KERQKVHCLNTLFAKLQINQ 299
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
++IF N+ +V+ L K+ ++ H M Q R+ + +FR+G+ R L+++DL R
Sbjct: 300 AIIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTR 359
Query: 341 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVV 400
GID+Q V++VIN+D P E YLHRIGRSGR+G G+AIN +T +D L+ I+
Sbjct: 360 GIDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELGTE 419
Query: 401 IEELPANV 408
I+ +P +
Sbjct: 420 IQPIPNEI 427
>UNIPROTKB|F1MSI6 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0007286 "spermatid development" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0006417
GO:GO:0007286 GO:GO:0003676 GO:GO:0006406 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0033391 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
IPI:IPI00724449 OMA:WHFAERI EMBL:DAAA02063102
Ensembl:ENSBTAT00000005587 Uniprot:F1MSI6
Length = 483
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 149/385 (38%), Positives = 231/385 (60%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 98 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 156
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + +
Sbjct: 157 MLSRVNALKLFPQCLCLAPTYELALQTGRVVERMGKFCVDVQVMYAIRGNRIPRGTDVTK 216
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+V+GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP +
Sbjct: 217 Q---IVIGTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFADQSIRIQRALPSEC 273
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I ++++ELTL I+Q++V + K + LC++Y
Sbjct: 274 QMLLFSATFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIY 333
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF TRR WLT +M H VS G++ + R I++ FR G +VLI
Sbjct: 334 GGITIGQAIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLI 393
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D
Sbjct: 394 TTNVCARGIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKL 453
Query: 388 RMLFDIQKFYNVVIEEL-PANVADL 411
+L IQ ++ I++L P ++ ++
Sbjct: 454 PLLMKIQDHFSENIKQLDPEDMDEI 478
>UNIPROTKB|E2QY95 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006406 "mRNA export from nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:10212
KO:K13182 GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:AAEX03012368 RefSeq:XP_533895.2 Ensembl:ENSCAFT00000025943
GeneID:476689 KEGG:cfa:476689 NextBio:20852303 Uniprot:E2QY95
Length = 427
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 147/387 (37%), Positives = 224/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 32 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 91
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +SL N++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 272 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 390
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|F1SCH3 [details] [associations]
symbol:DDX39A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:WANCVIS EMBL:FP103015
Ensembl:ENSSSCT00000015052 Uniprot:F1SCH3
Length = 475
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 147/387 (37%), Positives = 224/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 80 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 139
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 140 MGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 199
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +SL N++ FVLDE D+ML + + +
Sbjct: 200 SIKKDEEVLKKNCPHVVVGTPGRILALVRNRSLNLKNVKHFVLDECDKMLEQLDMRRDVQ 259
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 260 EIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 319
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 320 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 378
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 379 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 438
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 439 SDENDAKILNDVQDRFEVNVAELPEEI 465
>MGI|MGI:99240 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=ISO] [GO:0000346 "transcription export complex"
evidence=ISO] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=ISO] [GO:0030621 "U4 snRNA binding" evidence=ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:99240 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:AF118128 EMBL:AY255786 EMBL:AY255787
EMBL:AC007080 EMBL:AK088867 EMBL:AK051034 EMBL:BC011067
EMBL:BC024859 IPI:IPI00409462 RefSeq:NP_001239386.1
RefSeq:NP_062667.1 UniGene:Mm.439827 ProteinModelPortal:Q9Z1N5
SMR:Q9Z1N5 IntAct:Q9Z1N5 STRING:Q9Z1N5 PhosphoSite:Q9Z1N5
PaxDb:Q9Z1N5 PRIDE:Q9Z1N5 Ensembl:ENSMUST00000068056
Ensembl:ENSMUST00000172549 Ensembl:ENSMUST00000173731 GeneID:53817
KEGG:mmu:53817 InParanoid:Q9Z1N5 NextBio:310679 Bgee:Q9Z1N5
CleanEx:MM_BAT1A Genevestigator:Q9Z1N5 Uniprot:Q9Z1N5
Length = 428
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 151/405 (37%), Positives = 229/405 (56%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G+DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 RIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
R+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 374 RVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>RGD|70923 [details] [associations]
symbol:Ddx39b "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B"
species:10116 "Rattus norvegicus" [GO:0000245 "spliceosomal complex
assembly" evidence=IEA;ISO] [GO:0000346 "transcription export
complex" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005687 "U4 snRNP" evidence=IEA;ISO]
[GO:0005688 "U6 snRNP" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=IEA;ISO] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0017070 "U6 snRNA binding"
evidence=IEA;ISO] [GO:0030621 "U4 snRNA binding" evidence=IEA;ISO]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA;ISO]
[GO:0046784 "intronless viral mRNA export from host nucleus"
evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:70923 GO:GO:0005524
GO:GO:0005737 GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501
GO:GO:0017070 HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 CTD:7919 KO:K12812 OMA:NAENPAI
GO:GO:0000346 GO:GO:0005687 GO:GO:0005688 GO:GO:0030621
GO:GO:0046784 EMBL:M75168 EMBL:AF387339 EMBL:AJ314857 EMBL:BC080243
IPI:IPI00215291 PIR:A42811 RefSeq:NP_579834.2 UniGene:Rn.202950
ProteinModelPortal:Q63413 SMR:Q63413 STRING:Q63413
World-2DPAGE:0004:Q63413 PRIDE:Q63413 Ensembl:ENSRNOT00000001115
GeneID:114612 KEGG:rno:114612 UCSC:RGD:70923 InParanoid:Q63413
NextBio:618775 ArrayExpress:Q63413 Genevestigator:Q63413
GermOnline:ENSRNOG00000000841 Uniprot:Q63413
Length = 428
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 151/405 (37%), Positives = 229/405 (56%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G+DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGADGTEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 RIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
R+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 374 RVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q3T147 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9913 "Bos taurus" [GO:0006406 "mRNA export from nucleus"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046784 "intronless viral mRNA export
from host nucleus" evidence=IEA] [GO:0043008 "ATP-dependent protein
binding" evidence=IEA] [GO:0030621 "U4 snRNA binding" evidence=IEA]
[GO:0017070 "U6 snRNA binding" evidence=IEA] [GO:0010501 "RNA
secondary structure unwinding" evidence=IEA] [GO:0005688 "U6 snRNP"
evidence=IEA] [GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IEA] [GO:0000346 "transcription export
complex" evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 GO:GO:0006406 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000245
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0010501 GO:GO:0017070 HSSP:Q5STU4 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 EMBL:BC102131
IPI:IPI00690141 RefSeq:NP_001028801.1 UniGene:Bt.4945
ProteinModelPortal:Q3T147 SMR:Q3T147 STRING:Q3T147 PRIDE:Q3T147
Ensembl:ENSBTAT00000029090 GeneID:540191 KEGG:bta:540191 CTD:7919
InParanoid:Q3T147 KO:K12812 OMA:NAENPAI NextBio:20878478
ArrayExpress:Q3T147 GO:GO:0000346 GO:GO:0005687 GO:GO:0005688
GO:GO:0030621 GO:GO:0046784 Uniprot:Q3T147
Length = 428
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 151/405 (37%), Positives = 228/405 (56%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 RIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
R+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 374 RVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q13838 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0000346 "transcription export complex"
evidence=IDA] [GO:0046784 "intronless viral mRNA export from host
nucleus" evidence=IDA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008380 "RNA splicing" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0043008
"ATP-dependent protein binding" evidence=IDA] [GO:0005687 "U4
snRNP" evidence=IDA] [GO:0005688 "U6 snRNP" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005737 EMBL:BA000025 EMBL:CH471081
GO:GO:0016607 GO:GO:0005681 TCDB:3.A.18.1.1 EMBL:AL662847
EMBL:AL662801 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
CleanEx:HS_BAT1 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX CTD:7919 KO:K12812
GO:GO:0000346 GO:GO:0030621 GO:GO:0046784 EMBL:Z37166 EMBL:BT009909
EMBL:AK222912 EMBL:AB088115 EMBL:AB103621 EMBL:AB202112
EMBL:BX001040 EMBL:BX248516 EMBL:BX927320 EMBL:CR753820
EMBL:CR753864 EMBL:BC000361 EMBL:BC013006 EMBL:AF029061
EMBL:AF029062 IPI:IPI00641829 IPI:IPI00848161 PIR:I37201
RefSeq:NP_004631.1 RefSeq:NP_542165.1 UniGene:Hs.254042
UniGene:Hs.730849 PDB:1T5I PDB:1T6N PDB:1XTI PDB:1XTJ PDB:1XTK
PDBsum:1T5I PDBsum:1T6N PDBsum:1XTI PDBsum:1XTJ PDBsum:1XTK
ProteinModelPortal:Q13838 SMR:Q13838 IntAct:Q13838
MINT:MINT-1032422 STRING:Q13838 PhosphoSite:Q13838 DMDM:2500529
PaxDb:Q13838 PRIDE:Q13838 DNASU:7919 Ensembl:ENST00000383508
Ensembl:ENST00000396172 Ensembl:ENST00000400295
Ensembl:ENST00000400296 Ensembl:ENST00000412106
Ensembl:ENST00000412330 Ensembl:ENST00000413678
Ensembl:ENST00000414440 Ensembl:ENST00000415689
Ensembl:ENST00000416863 Ensembl:ENST00000430784
Ensembl:ENST00000431360 Ensembl:ENST00000441425
Ensembl:ENST00000445218 Ensembl:ENST00000448296
Ensembl:ENST00000453138 Ensembl:ENST00000456476
Ensembl:ENST00000456666 Ensembl:ENST00000458640 GeneID:7919
KEGG:hsa:7919 UCSC:uc003ntt.3 GeneCards:GC06M031500 HGNC:HGNC:13917
HPA:CAB034012 MIM:142560 neXtProt:NX_Q13838 PharmGKB:PA25262
InParanoid:Q13838 PhylomeDB:Q13838 ChiTaRS:DDX39B
EvolutionaryTrace:Q13838 GenomeRNAi:7919 NextBio:30405
ArrayExpress:Q13838 Bgee:Q13838 Genevestigator:Q13838
GermOnline:ENSG00000198563 GO:GO:0043008 Uniprot:Q13838
Length = 428
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 151/405 (37%), Positives = 228/405 (56%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 RIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
R+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 374 RVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q29024 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784 "intronless viral
mRNA export from host nucleus" evidence=IEA] [GO:0043008
"ATP-dependent protein binding" evidence=IEA] [GO:0030621 "U4 snRNA
binding" evidence=IEA] [GO:0017070 "U6 snRNA binding" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0005688 "U6 snRNP" evidence=IEA] [GO:0005687 "U4 snRNP"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000346 "transcription export complex" evidence=IEA]
[GO:0000245 "spliceosomal complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0016607
GO:GO:0005681 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000245 GO:GO:0004004 EMBL:AJ251914 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:Z34846 PIR:I47126
RefSeq:NP_001005157.1 UniGene:Ssc.11719 ProteinModelPortal:Q29024
SMR:Q29024 STRING:Q29024 PRIDE:Q29024 Ensembl:ENSSSCT00000001529
GeneID:448813 KEGG:ssc:448813 ArrayExpress:Q29024 Uniprot:Q29024
Length = 428
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 151/405 (37%), Positives = 228/405 (56%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 RIGRSGRFGRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
R+ R+GRFG KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 374 RVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
>MGI|MGI:99526 [details] [associations]
symbol:Ddx19a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:99526
GO:GO:0005524 GO:GO:0005737 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 EMBL:CH466525 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 OMA:PQAICLA GeneTree:ENSGT00530000063236 CTD:55308
HOVERGEN:HBG107989 OrthoDB:EOG46MBJK EMBL:L25125 EMBL:AK049467
EMBL:AK146548 EMBL:BC011270 IPI:IPI00123651 PIR:I49731
RefSeq:NP_031942.2 UniGene:Mm.287901 ProteinModelPortal:Q61655
SMR:Q61655 IntAct:Q61655 PhosphoSite:Q61655
REPRODUCTION-2DPAGE:Q61655 PaxDb:Q61655 PRIDE:Q61655
Ensembl:ENSMUST00000040416 GeneID:13680 KEGG:mmu:13680
InParanoid:Q543M2 ChiTaRS:DDX19A NextBio:284434 Bgee:Q61655
CleanEx:MM_DDX19A Genevestigator:Q61655
GermOnline:ENSMUSG00000015023 Uniprot:Q61655
Length = 478
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 148/384 (38%), Positives = 228/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 92 SFEELRLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 150
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L +++ Q L L+PT ELA Q KV+ +G + +K+ V G + Q++
Sbjct: 151 MLSRVEPADRYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKVSE 210
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 211 Q---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNC 267
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V E K + LC+LY
Sbjct: 268 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNNREEKFQALCNLY 327
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 328 GAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 387
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++
Sbjct: 388 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHS 447
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ +N IE L + D
Sbjct: 448 MNILNRIQEHFNKKIERLDTDDLD 471
>UNIPROTKB|Q5WR10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9615 "Canis lupus familiaris" [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046784
"intronless viral mRNA export from host nucleus" evidence=IEA]
[GO:0043008 "ATP-dependent protein binding" evidence=IEA]
[GO:0030621 "U4 snRNA binding" evidence=IEA] [GO:0017070 "U6 snRNA
binding" evidence=IEA] [GO:0010501 "RNA secondary structure
unwinding" evidence=IEA] [GO:0005688 "U6 snRNP" evidence=IEA]
[GO:0005687 "U4 snRNP" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0000346 "transcription export complex"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0016607 GO:GO:0005681 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000245 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0017070
HOVERGEN:HBG107334 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
CTD:7919 KO:K12812 OMA:NAENPAI GO:GO:0000346 GO:GO:0005687
GO:GO:0005688 GO:GO:0030621 GO:GO:0046784 EMBL:AY423389
RefSeq:NP_001014399.1 UniGene:Cfa.10131 ProteinModelPortal:Q5WR10
SMR:Q5WR10 Ensembl:ENSCAFT00000036511 GeneID:474839 KEGG:cfa:474839
InParanoid:Q5WR10 NextBio:20850784 Uniprot:Q5WR10
Length = 428
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 147/387 (37%), Positives = 223/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 33 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 92
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQL+ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 93 MGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGL 152
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + +
Sbjct: 153 SIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQ 212
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF++ P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V ++
Sbjct: 213 EIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDN 272
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 273 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQ 331
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 332 QFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 391
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V I ELP +
Sbjct: 392 SDENDAKILNDVQDRFEVNISELPDEI 418
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 147/374 (39%), Positives = 218/374 (58%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++GL ENLL + + GF + IQ I P G DV+ +AQ+GTGKTA F L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALG-DYLGVKVHACVGGTSVREDQRILSSGVH 159
+D + + Q +VLAPTRELA Q+ + + + G D G++V GG S + L G
Sbjct: 77 IDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQ 136
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VVVGTPGR+ D LRR+SL+ D +R+ VLDEADEML+ GF + I I +P Q+ +FS
Sbjct: 137 VVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFS 196
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
ATMPP +I +F+ P I V + I Q+ V K+ L + E +
Sbjct: 197 ATMPPAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGIT-KMTALERIAEVVEYD 255
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+IFV TR + +K+ + A +GD++Q R+ + + +SG S +L+ TD++A
Sbjct: 256 AMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVA 315
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN- 398
RG+D+ ++SLVINYDLP E Y+HRIGR+GR GR+G++I FV + + ++ N
Sbjct: 316 RGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGREGMSIAFVRPREMYSIRHYERLTNG 375
Query: 399 -VVIEELPANVADL 411
V+ +LP N+ D+
Sbjct: 376 TVLNYDLP-NIQDI 388
>ZFIN|ZDB-GENE-040426-1259 [details] [associations]
symbol:ddx39b "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39B" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-1259 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX511233
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOVERGEN:HBG107334
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 KO:K12812
OMA:NNPLINC EMBL:FP085397 EMBL:BC055240 IPI:IPI00502330
RefSeq:NP_957237.1 UniGene:Dr.5423 SMR:Q7SXU7 STRING:Q7SXU7
Ensembl:ENSDART00000052355 GeneID:393917 KEGG:dre:393917 CTD:393917
InParanoid:Q7SXU7 NextBio:20814893 Uniprot:Q7SXU7
Length = 435
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 148/382 (38%), Positives = 221/382 (57%)
Query: 33 SYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG GKTA
Sbjct: 45 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTA 104
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 150
F LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D
Sbjct: 105 VFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKD 164
Query: 151 QRILSS-GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQL 208
+ +L HVVVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF++
Sbjct: 165 EEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRM 224
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLE 267
P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V ++ E K
Sbjct: 225 TPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNR 283
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
L DL + L Q VIFV + ++ L + ++ A H M Q+ R ++F+
Sbjct: 284 KLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDF 343
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDD 386
R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D
Sbjct: 344 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 403
Query: 387 ERMLFDIQKFYNVVIEELPANV 408
R L D+Q + V I ELP +
Sbjct: 404 ARTLNDVQDRFEVNISELPEEI 425
>UNIPROTKB|Q5ZHZ0 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334
EMBL:AJ720994 IPI:IPI00585240 ProteinModelPortal:Q5ZHZ0 SMR:Q5ZHZ0
Uniprot:Q5ZHZ0
Length = 428
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 147/387 (37%), Positives = 223/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 33 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 92
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQL+ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 93 MGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGL 152
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
+V++D+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + +
Sbjct: 153 AVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQ 212
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF++ P + QV +FSAT+ E + RKFM P+ I V + +LTL G++Q++V ++
Sbjct: 213 EIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDN 272
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 273 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQ 331
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 332 QFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 391
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V I ELP +
Sbjct: 392 SDENDAKILNDVQDRFEVNISELPDEI 418
>UNIPROTKB|Q5E970 [details] [associations]
symbol:DDX39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
isoform 1" species:9913 "Bos taurus" [GO:0006406 "mRNA export from
nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0006406
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334
KO:K13182 OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549
OMA:WANCVIS EMBL:DAAA02019335 EMBL:BT021050 IPI:IPI00700228
RefSeq:NP_001029924.1 UniGene:Bt.29896 SMR:Q5E970 STRING:Q5E970
Ensembl:ENSBTAT00000029088 GeneID:614215 KEGG:bta:614215
InParanoid:Q5E970 NextBio:20899000 Uniprot:Q5E970
Length = 427
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 145/387 (37%), Positives = 224/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+D++ QA+SG
Sbjct: 32 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSG 91
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +SL N++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEEVLKRNCPHVVVGTPGRILALVRNRSLNLRNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 272 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFV 390
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>MGI|MGI:1915528 [details] [associations]
symbol:Ddx39 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915528 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003676 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX EMBL:AK088894 EMBL:AK145927 EMBL:AK146294
EMBL:AK150997 EMBL:AK162752 EMBL:AK168079 EMBL:BC020134
IPI:IPI00123878 IPI:IPI00553461 RefSeq:NP_932099.2 UniGene:Mm.28222
ProteinModelPortal:Q8VDW0 SMR:Q8VDW0 STRING:Q8VDW0
PhosphoSite:Q8VDW0 PaxDb:Q8VDW0 PRIDE:Q8VDW0
Ensembl:ENSMUST00000019576 Ensembl:ENSMUST00000109810
Ensembl:ENSMUST00000172396 GeneID:68278 KEGG:mmu:68278
UCSC:uc008chc.2 CTD:68278 GeneTree:ENSGT00660000095549
InParanoid:Q8VDW0 OMA:WANCVIS NextBio:326910 Bgee:Q8VDW0
CleanEx:MM_DDX39 Genevestigator:Q8VDW0
GermOnline:ENSMUSG00000005481 Uniprot:Q8VDW0
Length = 427
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 146/387 (37%), Positives = 224/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 32 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 91
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +SL N++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 272 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFV 390
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>RGD|619920 [details] [associations]
symbol:Ddx39a "DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006406 "mRNA export from nucleus"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 EMBL:AF063447 RGD:619920
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10212 HOVERGEN:HBG107334 KO:K13182
OrthoDB:EOG4XSKPX GeneTree:ENSGT00660000095549 OMA:WANCVIS
EMBL:BC086328 IPI:IPI00325144 RefSeq:NP_446015.2 UniGene:Rn.161716
ProteinModelPortal:Q5U216 SMR:Q5U216 STRING:Q5U216 PRIDE:Q5U216
Ensembl:ENSRNOT00000045974 GeneID:89827 KEGG:rno:89827
InParanoid:Q5U216 NextBio:617744 Genevestigator:Q5U216
GermOnline:ENSRNOG00000004373 Uniprot:Q5U216
Length = 427
Score = 642 (231.1 bits), Expect = 6.9e-63, P = 6.9e-63
Identities = 146/387 (37%), Positives = 224/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 32 KDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 91
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +SL N++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q VIFV + ++ L + ++ A H M Q R +
Sbjct: 272 E-KNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFV 390
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|Q5ZMC1 [details] [associations]
symbol:DDX19B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K01529 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 OMA:PQAICLA
GeneTree:ENSGT00530000063236 HOVERGEN:HBG107989 CTD:11269
EMBL:AADN02040672 UniGene:Gga.7753 EMBL:AJ719463 IPI:IPI00571485
RefSeq:NP_001006568.1 SMR:Q5ZMC1 Ensembl:ENSGALT00000039619
GeneID:426504 KEGG:gga:426504 InParanoid:Q5ZMC1 NextBio:20828056
Uniprot:Q5ZMC1
Length = 479
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 147/384 (38%), Positives = 228/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 93 SFEELHLKPQLLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 151
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L +++ G Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I
Sbjct: 152 MLSRVEPGNKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE 211
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D + + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 212 Q---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRDC 268
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + +K + P I +KR+E TL+ IKQ++V + K LC++Y
Sbjct: 269 QMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFRALCNIY 328
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q+++F +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 329 GAITIAQAMVFCHTRKTAGWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLV 388
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN V ++
Sbjct: 389 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHS 448
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
+L IQ+ ++ I +L + D
Sbjct: 449 MNILNRIQEHFSKKINKLDTDDLD 472
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 143/377 (37%), Positives = 223/377 (59%)
Query: 39 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 98
+ F +GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 99 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 158
Q++ G + Q L++ PTRELA Q+ + LG YL V+ A GG ++ R L GV
Sbjct: 62 QRIQRGK-KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
V+VGTPGR+ D + R++ I+I +LDEADEML GF D I I L + Q +F
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 219 SATMPPEALEITRKFMN--KPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
SAT+P I +KF+ K V+ LV R++ T+ I+Q + + + E K+E L + +
Sbjct: 181 SATLPAPIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSE 237
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q+++F T+++VD + +++ R + HGDM Q R ++ F++G + +L+ TD
Sbjct: 238 LPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATD 297
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+ ARG+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I++
Sbjct: 298 VAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEA 357
Query: 397 YNVVI--EELPANVADL 411
N + E LP V DL
Sbjct: 358 INKRLKREILPEPV-DL 373
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 143/377 (37%), Positives = 223/377 (59%)
Query: 39 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 98
+ F +GL LL+ + GFE P+ IQ+ I +G +++ QA +GTGKTA + +L
Sbjct: 2 EEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVL 61
Query: 99 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 158
Q++ G + Q L++ PTRELA Q+ + LG YL V+ A GG ++ R L GV
Sbjct: 62 QRIQRGK-KAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIRGLRQGV 120
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
V+VGTPGR+ D + R++ I+I +LDEADEML GF D I I L + Q +F
Sbjct: 121 EVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNRQQTLLF 180
Query: 219 SATMPPEALEITRKFMN--KPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
SAT+P I +KF+ K V+ LV R++ T+ I+Q + + + E K+E L + +
Sbjct: 181 SATLPAPIKTIIKKFLGGYKTVK-LVGREK-TVPAIRQVYYELPETE-KIEGLVSILNSE 237
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q+++F T+++VD + +++ R + HGDM Q R ++ F++G + +L+ TD
Sbjct: 238 LPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATD 297
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+ ARG+D+ VS VIN+D+P PE+Y+HRIGR+GR GR+G AI + + ++L I++
Sbjct: 298 VAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKLLKAIEEA 357
Query: 397 YNVVI--EELPANVADL 411
N + E LP V DL
Sbjct: 358 INKRLKREILPEPV-DL 373
>UNIPROTKB|O00148 [details] [associations]
symbol:DDX39A "ATP-dependent RNA helicase DDX39A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0006406 "mRNA export from
nucleus" evidence=IGI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:U90426 EMBL:AK026614 EMBL:BC001009
IPI:IPI00940237 RefSeq:NP_005795.2 UniGene:Hs.311609
ProteinModelPortal:O00148 SMR:O00148 IntAct:O00148
MINT:MINT-1035991 STRING:O00148 PhosphoSite:O00148 PaxDb:O00148
PeptideAtlas:O00148 PRIDE:O00148 DNASU:10212
Ensembl:ENST00000242776 GeneID:10212 KEGG:hsa:10212 UCSC:uc002myo.3
CTD:10212 GeneCards:GC19M014521 HGNC:HGNC:17821 neXtProt:NX_O00148
PharmGKB:PA27226 HOVERGEN:HBG107334 InParanoid:O00148 KO:K13182
OrthoDB:EOG4XSKPX PhylomeDB:O00148 ChiTaRS:DDX39A GenomeRNAi:10212
NextBio:38664 ArrayExpress:O00148 Bgee:O00148 CleanEx:HS_DDX39
Genevestigator:O00148 GermOnline:ENSG00000123136 Uniprot:O00148
Length = 427
Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
Identities = 144/387 (37%), Positives = 223/387 (57%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D SY ++ + F L+ LLR I GFE PS +Q I G+DV+ QA+SG
Sbjct: 32 KDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSG 91
Query: 87 TGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGT 145
GKTA F LQQ++ + LV+ TRELA QI K Y+ VKV GG
Sbjct: 92 MGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGL 151
Query: 146 SVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIY 203
S+++D+ +L HVVVGTPGR+ ++R +S N++ FVLDE D+ML + + +
Sbjct: 152 SIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQ 211
Query: 204 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKE 262
+IF+L P + Q +FSAT+ + + RKFM P+ + V + +LTL G++Q++V ++
Sbjct: 212 EIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDS 271
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
E K L DL + L Q +IFV + ++ L + ++ A H M Q R +
Sbjct: 272 E-KNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQ 330
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV
Sbjct: 331 QFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFV 390
Query: 383 T-RDDERMLFDIQKFYNVVIEELPANV 408
+ +D ++L D+Q + V + ELP +
Sbjct: 391 SDENDAKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|B4DRZ7 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
UniGene:Hs.656037 HGNC:HGNC:25628 EMBL:AC012184 EMBL:AK299504
IPI:IPI01009735 SMR:B4DRZ7 STRING:B4DRZ7 Ensembl:ENST00000443119
UCSC:uc002eys.3 Uniprot:B4DRZ7
Length = 388
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 147/374 (39%), Positives = 222/374 (59%)
Query: 50 LLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLV 106
LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 12 LLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDR 70
Query: 107 ECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILSSGVHVVVGTP 165
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I +V+GTP
Sbjct: 71 YPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ---IVIGTP 127
Query: 166 GRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKIQVGVFSATMP 223
G V D + + + P I++FVLDEAD M++ +G +DQ I ++LP Q+ +FSAT
Sbjct: 128 GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFE 187
Query: 224 PEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVI 283
+ +K + P I +KR+E TL+ IKQ++V + K + LC+LY + I Q++I
Sbjct: 188 DSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMI 247
Query: 284 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 343
F +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGID
Sbjct: 248 FCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGID 307
Query: 344 VQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKF 396
V+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L IQ+
Sbjct: 308 VEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEH 367
Query: 397 YNVVIEELPANVAD 410
+N IE L + D
Sbjct: 368 FNKKIERLDTDDLD 381
>UNIPROTKB|I3L352 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:25628 EMBL:AC012184
Ensembl:ENST00000575878 Uniprot:I3L352
Length = 396
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 147/374 (39%), Positives = 222/374 (59%)
Query: 50 LLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLV 106
LL+G+YA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 20 LLQGVYAMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPSDR 78
Query: 107 ECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILSSGVHVVVGTP 165
Q L L+PT ELA Q KV+ +G Y +K+ V G + Q+I +V+GTP
Sbjct: 79 YPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ---IVIGTP 135
Query: 166 GRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKIQVGVFSATMP 223
G V D + + + P I++FVLDEAD M++ +G +DQ I ++LP Q+ +FSAT
Sbjct: 136 GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFE 195
Query: 224 PEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVI 283
+ +K + P I +KR+E TL+ IKQ++V + K + LC+LY + I Q++I
Sbjct: 196 DSVWKFAQKVVPDPNVIKLKREEETLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMI 255
Query: 284 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 343
F +TR+ WL ++ H V+ G+M R ++ FR G +VL+TT++ ARGID
Sbjct: 256 FCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGID 315
Query: 344 VQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKF 396
V+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+A+N V ++ +L IQ+
Sbjct: 316 VEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEH 375
Query: 397 YNVVIEELPANVAD 410
+N IE L + D
Sbjct: 376 FNKKIERLDTDDLD 389
>ZFIN|ZDB-GENE-080721-12 [details] [associations]
symbol:zgc:193690 "zgc:193690" species:7955 "Danio
rerio" [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-080721-12 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000063236
EMBL:CR846089 IPI:IPI00928637 ProteinModelPortal:F1Q5T4
Ensembl:ENSDART00000134461 ArrayExpress:F1Q5T4 Bgee:F1Q5T4
Uniprot:F1Q5T4
Length = 492
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 148/370 (40%), Positives = 220/370 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+ LL+G+Y GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 85 TFEELRLKPQLLKGVYEMGFNRPSKIQENAL-PMMLAEPPQNLIAQSQSGTGKTAAFVLA 143
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L +D Q L ++PT ELA Q KV+ +G Y V + V G + RI
Sbjct: 144 MLSHVDPACKWSQCLCISPTYELALQTGKVIEQMGKFYPEVTLAYAVRGHRMERGVRIKD 203
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D ++ + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 204 Q---IVIGTPGTVLDWCIKLKLIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKGC 260
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + + P I +KR+E TL+ IKQ++V +E K LC++Y
Sbjct: 261 QMLLFSATFEDSVWKFAERVVPDPNIIKLKREEETLDTIKQYYVLCNSKEDKFNALCNIY 320
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ +WL +M H V+ G+M R ++ FR G +VLI
Sbjct: 321 GAITIAQAMIFCHTRKMANWLAGQMSKEGHQVALLSGEMVVEQRAAVIERFRDGKEKVLI 380
Query: 334 TTDLLARGIDVQQVSLVINYDLP----TQPEN--YLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QVS+VIN+DLP + P+N YLHRIGR+GRFG++G+AIN V D +
Sbjct: 381 TTNVCARGIDVEQVSVVINFDLPLDKDSNPDNETYLHRIGRTGRFGKRGLAINMV--DSQ 438
Query: 388 RMLFDIQKFY 397
R + +I K Y
Sbjct: 439 RSM-EILKTY 447
>ZFIN|ZDB-GENE-040426-2902 [details] [associations]
symbol:ddx39ab "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Ab" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-040426-2902 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOVERGEN:HBG107334 KO:K13182 OrthoDB:EOG4XSKPX
GeneTree:ENSGT00660000095549 OMA:WANCVIS CTD:7919 EMBL:FP101915
EMBL:BC044169 EMBL:BC067555 EMBL:BC128804 EMBL:BX248081
IPI:IPI00631848 RefSeq:NP_998142.1 UniGene:Dr.75872 SMR:Q803W0
STRING:Q803W0 Ensembl:ENSDART00000019957 GeneID:406249
KEGG:dre:406249 InParanoid:Q803W0 NextBio:20817884 Uniprot:Q803W0
Length = 427
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 143/382 (37%), Positives = 222/382 (58%)
Query: 33 SYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
SY ++ + F L+ LLR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 96
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVRED 150
F LQQ++ + LV+ TRELA QI K Y+ VKV GG S+++D
Sbjct: 97 VFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKD 156
Query: 151 QRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQL 208
+ +L H+VVGTPGR+ ++R ++L N++ FVLDE D+ML + + + DIF+L
Sbjct: 157 EDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRL 216
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLE 267
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++ ++ E K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNE-KNR 275
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
L DL + L Q VIFV + ++ L+ + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDF 335
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-D 386
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI FV+ + D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETD 395
Query: 387 ERMLFDIQKFYNVVIEELPANV 408
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|F1S758 [details] [associations]
symbol:LOC100523329 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000063236 OMA:WHFAERI
EMBL:CU928873 Ensembl:ENSSSCT00000016589 Uniprot:F1S758
Length = 379
Score = 633 (227.9 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 147/378 (38%), Positives = 225/378 (59%)
Query: 47 QENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDY 103
+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++
Sbjct: 1 KEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNA 59
Query: 104 GLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILSSGVHVVV 162
+ Q L LAPT ELA Q +V+ +G + + V+V + G + I +++
Sbjct: 60 LELFPQCLCLAPTYELALQTGRVVERMGRFCVDVQVMYAIRGNRIPRGTDITKQ---III 116
Query: 163 GTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSA 220
GTPG V D +R+ + IR+FVLDEAD M+ ++GF DQ I + LP Q+ +FSA
Sbjct: 117 GTPGTVLDWCFKRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSGCQMLLFSA 176
Query: 221 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQ 280
T + + + P I ++++ELTL I+Q++V + K + LC++Y + I Q
Sbjct: 177 TFEDSVWQFAERIIPDPNVIKLRKEELTLNNIRQYYVLCGNRKDKYQALCNIYGGITIGQ 236
Query: 281 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 340
++IF TRR WLT +M H VS G++ + R I++ FR G +VLITT++ AR
Sbjct: 237 AIIFCQTRRNAKWLTVEMMQDGHQVSLLSGELTVDQRAAIIQRFRDGKEKVLITTNVCAR 296
Query: 341 GIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
GIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ
Sbjct: 297 GIDVKQVTIVVNFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQ 356
Query: 395 KFYNVVIEEL-PANVADL 411
+N I++L P ++ ++
Sbjct: 357 DHFNSNIKQLDPEDMDEI 374
>UNIPROTKB|J3QL17 [details] [associations]
symbol:DDX25 "ATP-dependent RNA helicase DDX25"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AP000842 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:18698
ChiTaRS:DDX25 Ensembl:ENST00000530414 Uniprot:J3QL17
Length = 468
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 146/371 (39%), Positives = 219/371 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L+E LL+GIYA GF +PS IQ+ + P ++I Q+QSGTGKTA F
Sbjct: 101 TFEELRLKEELLKGIYAMGFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLA 159
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILS 155
+L +++ + Q L LAPT ELA Q +V+ +G + + V+V + G + I
Sbjct: 160 MLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAIRGNRIPRGTDITK 219
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRP-DNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+++GTPG V D + L IR+FVLDEAD M+ ++GF D I + LP +
Sbjct: 220 Q---IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFSDHSIRIQRALPSEC 276
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + P I ++++ELTL I+Q++V E + K + LC++Y
Sbjct: 277 QMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELTLNNIRQYYVLCEHRKDKYQALCNIY 336
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
++ I Q++IF TRR WLT +M H VS G++ R I++ FR G +VLI
Sbjct: 337 GSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDGKEKVLI 396
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV+QV++V+N+DLP +P E YLHRIGR+GRFG+KG+A N + D+
Sbjct: 397 TTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDEL 456
Query: 388 RMLFDIQKFYN 398
L IQ ++
Sbjct: 457 PSLMKIQDHFS 467
>ZFIN|ZDB-GENE-030131-4275 [details] [associations]
symbol:ddx39aa "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 39Aa" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-4275 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BC071505
IPI:IPI00510085 UniGene:Dr.1111 ProteinModelPortal:Q6IQA5
SMR:Q6IQA5 STRING:Q6IQA5 PRIDE:Q6IQA5 InParanoid:Q6IQA5
ArrayExpress:Q6IQA5 Bgee:Q6IQA5 Uniprot:Q6IQA5
Length = 427
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 143/382 (37%), Positives = 221/382 (57%)
Query: 33 SYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
SY ++ + F L+ LLR I GFE PS +Q I G+D++ QA+SG GKTA
Sbjct: 37 SYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTA 96
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVRED 150
F LQQ++ + LV+ TRELA QI K Y+ VK A GG S+++D
Sbjct: 97 VFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAAFFGGMSIKKD 156
Query: 151 QRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQL 208
+ +L H+VVGTPGR+ + R ++L N++ FVLDE D+ML + + + DIF+L
Sbjct: 157 EDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRL 216
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLE 267
P + Q +FSAT+ E + RKFM P+ + V + +LTL G++Q++V ++ E K
Sbjct: 217 TPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSE-KNR 275
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
L DL + L Q VIFV + + L+ + ++ A H M Q R ++F+
Sbjct: 276 KLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDF 335
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD-D 386
R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+A+ FV+ + D
Sbjct: 336 QRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVIFVSDETD 395
Query: 387 ERMLFDIQKFYNVVIEELPANV 408
++L D+Q + V + ELP +
Sbjct: 396 AKILNDVQDRFEVNVAELPEEI 417
>UNIPROTKB|J3QL43 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000584784
Uniprot:J3QL43
Length = 271
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 130/204 (63%), Positives = 154/204 (75%)
Query: 16 DARMNDLLGSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIV 71
D+R D G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+
Sbjct: 6 DSRSRDN-GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAIL 64
Query: 72 PFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALG 131
P KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALG
Sbjct: 65 PCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALG 124
Query: 132 DYLGVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEA 190
DY+G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEA
Sbjct: 125 DYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEA 184
Query: 191 DEMLSRGFKDQIYDIFQLLPPKIQ 214
DEMLSRGFKDQIYDIFQ L Q
Sbjct: 185 DEMLSRGFKDQIYDIFQKLNSNTQ 208
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 62/118 (52%), Positives = 83/118 (70%)
Query: 197 GFKDQIYDIF--QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVK-----RDELTL 249
G +++D+ + L PK + +F E L +R F ++ I K ++ELTL
Sbjct: 157 GTPGRVFDMLNRRYLSPKY-IKMFVLDEADEML--SRGFKDQIYDIFQKLNSNTQEELTL 213
Query: 250 EGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSA 307
EGI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD TVSA
Sbjct: 214 EGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSA 271
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 628 (226.1 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 147/378 (38%), Positives = 208/378 (55%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E TF +GL+ +L + G+EKPS IQ I G DV+ AQ+G+GKTA F
Sbjct: 3 EFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSL 62
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRIL 154
+LQ LD L Q LVLAPTRELA Q+ + M ++ GV V A GG R L
Sbjct: 63 PLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRAL 122
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
G +VVGTPGR+ D L+R +L + VLDEADEML GF + + I +P Q
Sbjct: 123 RQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQ 182
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+FSATMP ITR+FM +P + ++ T I Q + V K E L E
Sbjct: 183 TALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMR-KNEALVRFLE 241
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
++IFV T+ + + + + +A +GDM+Q R+ + + G +LI
Sbjct: 242 AEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIA 301
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARG+DV+++SLV+NYD+P E+Y+HRIGR+GR GR G A+ FV + R+L +I+
Sbjct: 302 TDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIE 361
Query: 395 KFYNVVIEELPANVADLL 412
+ + I E+ A+LL
Sbjct: 362 RTMKLTIPEVELPNAELL 379
>UNIPROTKB|Q9DGP9 [details] [associations]
symbol:deadsouth "ATP-dependent RNA helicase DDX25"
species:8355 "Xenopus laevis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0003724 "RNA helicase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032019 "mitochondrial cloud" evidence=IDA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0045495 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0032019 HSSP:Q9UHL0 HOVERGEN:HBG107989 CTD:29118
EMBL:AF190623 RefSeq:NP_001082017.1 UniGene:Xl.670
ProteinModelPortal:Q9DGP9 SMR:Q9DGP9 PRIDE:Q9DGP9 GeneID:398180
KEGG:xla:398180 Xenbase:XB-GENE-958142 Uniprot:Q9DGP9
Length = 483
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 139/376 (36%), Positives = 219/376 (58%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG--LDVIQQAQSGTGKTATFCSGI 97
+F+ + L+ LLRGIYA GF +PS IQ+ + ++I Q+QSGTGKTA F +
Sbjct: 98 SFEELHLKNELLRGIYAMGFNRPSKIQENALPMMLADPPQNLIAQSQSGTGKTAAFVLAM 157
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSS 156
L ++D Q + L+PT ELA Q KV+ +G + G++V + G + R+ +
Sbjct: 158 LSRVDANKKYPQCICLSPTFELALQTGKVVEEMGKFCAGIEVIYALRGNRPGKGSRLEAQ 217
Query: 157 GVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKIQ 214
+V+GTPG V D + + + +NI +FVLDEAD M++ +G D + + +P Q
Sbjct: 218 ---IVIGTPGTVLDWCFKLRLITVENISVFVLDEADVMINVQGHSDHSVRVKRSMPKSCQ 274
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+ +FSAT + + P I +K++ELTL+ I+QF+ E +E K LC+LY
Sbjct: 275 MLLFSATFEDSVWAFAERIVPDPNIIKLKKEELTLKNIQQFYDQCENKEQKYSALCNLYG 334
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
+ I Q+++F TR+ WL+ K+ H V+ G++ R +++ FR G +VL+T
Sbjct: 335 VITIAQAIVFCQTRKIASWLSQKLSDDGHQVALLSGELPVYDRADMIQRFREGREKVLVT 394
Query: 335 TDLLARGIDVQQVSLVINYDLPTQP------ENYLHRIGRSGRFGRKGVAINFVTRDDER 388
T++ ARGIDV+QVS+V+N+DLP E YLHRIGR+GRFG+KG+A++ +
Sbjct: 395 TNVCARGIDVEQVSIVVNFDLPVNVDGSVDFETYLHRIGRTGRFGKKGIAVSLIENFFVY 454
Query: 389 MLFDIQKFYNVVIEEL 404
ML +I+ +N I +L
Sbjct: 455 MLKEIEDHFNTKITKL 470
>TAIR|locus:2147987 [details] [associations]
symbol:UAP56a "homolog of human UAP56 a" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0009506
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046686
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL360314 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ010466 EMBL:AY052303
EMBL:BT001052 EMBL:AK221273 EMBL:AK221708 EMBL:AK226428
IPI:IPI00760330 IPI:IPI00760336 IPI:IPI00760344 PIR:T51343
RefSeq:NP_568244.2 RefSeq:NP_568245.1 UniGene:At.49007
UniGene:At.73904 ProteinModelPortal:Q56XG6 SMR:Q56XG6 IntAct:Q56XG6
STRING:Q56XG6 PRIDE:Q56XG6 EnsemblPlants:AT5G11170.1
EnsemblPlants:AT5G11200.1 GeneID:830986 GeneID:830990
KEGG:ath:AT5G11170 KEGG:ath:AT5G11200 GeneFarm:932 TAIR:At5g11170
InParanoid:Q56XG6 PhylomeDB:Q56XG6 ProtClustDB:CLSN2689601
Genevestigator:Q56XG6 Uniprot:Q56XG6
Length = 427
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 146/368 (39%), Positives = 209/368 (56%)
Query: 46 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 105
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 106 VECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVG 163
+ ALVL TRELA QI YL KV GG +++ + +L + H+VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 164 TPGRVFDMLRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSATM 222
TPGRV + R + L N+R F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 223 PPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQS 281
E + +KFM P+ I V + +LTL G+ Q ++ + + E K L DL + L Q
Sbjct: 233 SKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQV 291
Query: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341
VIFV + + L + + H M Q R + F+ G R+L+ TDL+ RG
Sbjct: 292 VIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRG 351
Query: 342 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVV 400
ID+++V++VINYD+P + YLHR+GR+GRFG KG+AI FV + D +L +Q+ + V
Sbjct: 352 IDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVD 411
Query: 401 IEELPANV 408
I+ELP +
Sbjct: 412 IKELPEQI 419
>UNIPROTKB|J3QR64 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000581384
Uniprot:J3QR64
Length = 214
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 126/191 (65%), Positives = 149/191 (78%)
Query: 24 GSDGQD----FFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDV 79
G DG + ++++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P KG DV
Sbjct: 24 GPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDV 83
Query: 80 IQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVH 139
I QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+G H
Sbjct: 84 IAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCH 143
Query: 140 ACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGF 198
AC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEMLSRGF
Sbjct: 144 ACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGF 203
Query: 199 KDQIYDIFQLL 209
KDQIYDIFQ L
Sbjct: 204 KDQIYDIFQKL 214
>POMBASE|SPAC17G6.14c [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase Uap56"
species:4896 "Schizosaccharomyces pombe" [GO:0000346 "transcription
export complex" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006406 "mRNA export from nucleus" evidence=ISO] [GO:0008380
"RNA splicing" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC17G6.14c GO:GO:0005524 EMBL:CU329670
GO:GO:0008380 GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0005681
GO:GO:0003723 GO:GO:0006406 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:D89270 PIR:T37846 PIR:T43199
RefSeq:NP_594261.1 ProteinModelPortal:O13792 SMR:O13792
STRING:O13792 EnsemblFungi:SPAC17G6.14c.1 GeneID:2542433
KEGG:spo:SPAC17G6.14c OMA:DAVEFNQ NextBio:20803490 Uniprot:O13792
Length = 434
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 147/384 (38%), Positives = 222/384 (57%)
Query: 33 SYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
SY ++ T F L+ LLR I GFE PS +QQ I G DV+ QA+SG GKTA
Sbjct: 44 SYVGIHSTGFRDFLLKPELLRAITDSGFEHPSEVQQVCIPQSILGTDVLCQAKSGMGKTA 103
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 150
F LQQ++ E LVL TRELA QI+ YL V+ GG ++++D
Sbjct: 104 VFVLSTLQQIEPVDGEVSVLVLCHTRELAFQIKNEYARFSKYLPDVRTAVFYGGINIKQD 163
Query: 151 QRIL---SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIF 206
S H+VV TPGR+ ++R + L+ ++++ FVLDE D++L S + I ++F
Sbjct: 164 MEAFKDKSKSPHIVVATPGRLNALVREKILKVNSVKHFVLDECDKLLESVDMRRDIQEVF 223
Query: 207 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWK 265
+ PP+ QV +FSAT+ E I +KFM P+ I V + +LTL G++Q +V +E E+ K
Sbjct: 224 RATPPQKQVMMFSATLSNEIRPICKKFMQNPLEIYVDDETKLTLHGLQQHYVKLE-EKAK 282
Query: 266 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 325
+ DL ++L Q VIFV + + + L +R + HG + Q R + F+
Sbjct: 283 NRKINDLLDSLEFNQVVIFVKSVSRANELDRLLRECNFPSICIHGGLPQEERIKRYKAFK 342
Query: 326 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 385
R+ + TD+ RGID+++V++VINYD+P P++YLHR+GR+GRFG KG+AI F + +
Sbjct: 343 DFDKRICVATDVFGRGIDIERVNIVINYDMPDSPDSYLHRVGRAGRFGTKGLAITFSSSE 402
Query: 386 DERMLFD-IQKFYNVVIEELPANV 408
++ + D IQ+ + V I ELP +
Sbjct: 403 EDSQILDKIQERFEVNITELPDEI 426
>TAIR|locus:2148027 [details] [associations]
symbol:UAP56b "homolog of human UAP56 b" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005618
"cell wall" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002688
GO:GO:0005618 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:At.49007 UniGene:At.73904 GeneID:830990 KEGG:ath:AT5G11200
OMA:LECVINY IPI:IPI00938969 RefSeq:NP_001154706.1
ProteinModelPortal:F4JWF6 SMR:F4JWF6 PRIDE:F4JWF6
EnsemblPlants:AT5G11200.2 Uniprot:F4JWF6
Length = 486
Score = 338 (124.0 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 86/224 (38%), Positives = 122/224 (54%)
Query: 46 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 105
L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ++
Sbjct: 53 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSP 112
Query: 106 VECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVG 163
+ ALVL TRELA QI YL KV GG +++ + +L + H+VVG
Sbjct: 113 GQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVG 172
Query: 164 TPGRVFDMLRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSATM 222
TPGRV + R + L N+R F+LDE D+ML S + + +IF++ P QV +FSAT+
Sbjct: 173 TPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATL 232
Query: 223 PPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKL 266
E + +KFM ++ + ++ ++ F VE EW+L
Sbjct: 233 SKEIRPVCKKFMQD----FLENETVS---VRLFSFGVENSEWRL 269
Score = 302 (111.4 bits), Expect = 8.8e-61, Sum P(2) = 8.8e-61
Identities = 66/174 (37%), Positives = 101/174 (58%)
Query: 237 PVRILVKRD-ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLT 295
P+ I V + +LTL G+ Q ++ + + E K L DL + L Q VIFV + + L
Sbjct: 306 PMEIYVDDEAKLTLHGLVQHYIKLSEME-KNRKLNDLLDALDFNQVVIFVKSVSRAAELN 364
Query: 296 DKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDL 355
+ + H M Q R + F+ G R+L+ TDL+ RGID+++V++VINYD+
Sbjct: 365 KLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDM 424
Query: 356 PTQPENYLHRIGRSGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPANV 408
P + YLHR+GR+GRFG KG+AI FV + D +L +Q+ + V I+ELP +
Sbjct: 425 PDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDIKELPEQI 478
>WB|WBGene00001840 [details] [associations]
symbol:hel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0008380
GO:GO:0006397 GO:GO:0010171 GO:GO:0005681 GO:GO:0003723
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095549 OMA:NAENPAI EMBL:Z54327 EMBL:U08102
PIR:T19484 RefSeq:NP_001021985.1 ProteinModelPortal:Q18212
SMR:Q18212 STRING:Q18212 PaxDb:Q18212 PRIDE:Q18212
EnsemblMetazoa:C26D10.2a.1 EnsemblMetazoa:C26D10.2a.2 GeneID:174333
KEGG:cel:CELE_C26D10.2 UCSC:C26D10.2a CTD:174333 WormBase:C26D10.2a
InParanoid:Q18212 NextBio:883586 ArrayExpress:Q18212 GO:GO:0001703
Uniprot:Q18212
Length = 425
Score = 622 (224.0 bits), Expect = 9.0e-61, P = 9.0e-61
Identities = 141/391 (36%), Positives = 223/391 (57%)
Query: 24 GSDGQDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 82
G D + +Y ++ + F L+ +LR I GFE PS +Q I G+DV+ Q
Sbjct: 25 GGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQ 84
Query: 83 AQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHAC 141
A+SG GKTA F LQQL+ E + + TRELA QI K YL GVKV
Sbjct: 85 AKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVF 144
Query: 142 VGGTSVREDQ-RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FK 199
GG ++++D+ R+ + H+VVGTPGR+ + R L+ D ++ FVLDE D+M+ +
Sbjct: 145 FGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMR 204
Query: 200 DQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVN 258
+ +I ++ P + QV +FSAT+P E + ++FM P+ + V + +LTL G++Q +V
Sbjct: 205 RDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVK 264
Query: 259 VEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 318
+++ E K L +L + L Q VIFV ++ + L + ++ A H M Q R
Sbjct: 265 LKEAE-KNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERL 323
Query: 319 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVA 378
+ F+ R+L+ TDL RG+D+++V++V NYD+P ++YLHR+ R+GRFG KG+A
Sbjct: 324 SRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLA 383
Query: 379 INFVT-RDDERMLFDIQKFYNVVIEELPANV 408
I FV+ +D + L +Q +++ I ELP +
Sbjct: 384 ITFVSDENDAKTLNSVQDRFDISITELPEKI 414
>FB|FBgn0014189 [details] [associations]
symbol:Hel25E "Helicase at 25E" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IC;NAS;IDA]
[GO:0006338 "chromatin remodeling" evidence=IMP] [GO:0005700
"polytene chromosome" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS;NAS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0006406 "mRNA export from nucleus" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005875 GO:GO:0007052
EMBL:AE014134 GO:GO:0016607 GO:GO:0005681 GO:GO:0003723
GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095549
KO:K12812 EMBL:X79802 EMBL:L06018 EMBL:AY118921 PIR:S51601
RefSeq:NP_723089.1 RefSeq:NP_723090.1 RefSeq:NP_723091.1
UniGene:Dm.3332 ProteinModelPortal:Q27268 SMR:Q27268 DIP:DIP-20199N
IntAct:Q27268 MINT:MINT-304772 STRING:Q27268 PaxDb:Q27268
PRIDE:Q27268 EnsemblMetazoa:FBtr0079123 EnsemblMetazoa:FBtr0079124
EnsemblMetazoa:FBtr0079125 GeneID:33781 KEGG:dme:Dmel_CG7269
CTD:33781 FlyBase:FBgn0014189 InParanoid:Q27268 OMA:ENRFLEE
OrthoDB:EOG47WM45 PhylomeDB:Q27268 GenomeRNAi:33781 NextBio:785218
Bgee:Q27268 GermOnline:CG7269 Uniprot:Q27268
Length = 424
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 143/391 (36%), Positives = 227/391 (58%)
Query: 28 QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 86
+D +Y ++ + F L+ +LR I GFE PS +Q I G+D++ QA+SG
Sbjct: 29 KDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSG 88
Query: 87 TGKTATFCSGILQQLDYGLVE-CQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGG 144
GKTA F LQQL+ C LV+ TRELA QI K Y+ VKV GG
Sbjct: 89 MGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGG 148
Query: 145 TSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQI 202
++++D+ L SG H+VVGTPGR+ ++R + L ++ FVLDE D+ML + + +
Sbjct: 149 MAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDV 208
Query: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEK 261
+IF+ P QV +FSAT+ + + +KFM P+ + V + +LTL G++Q +VN+++
Sbjct: 209 QEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKE 268
Query: 262 EEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 321
E K + L +L + L Q VIFV + ++ L+ + ++ H M Q R
Sbjct: 269 NE-KNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRY 327
Query: 322 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 381
++F+ R+L+ T+L RG+D+++V++V NYD+P + YLHR+ R+GRFG KG+AI F
Sbjct: 328 QQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 387
Query: 382 VT-RDDERMLFDIQKFYNVVIEELPANVADL 411
V+ +D ++L ++Q ++V I ELP + DL
Sbjct: 388 VSDENDAKILNEVQDRFDVNISELPEEI-DL 417
>ZFIN|ZDB-GENE-020419-30 [details] [associations]
symbol:ddx19 "DEAD/H (Asp-Glu-Ala-Asp/His) box
polypeptide 19 (DBP5 homolog, yeast)" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-020419-30 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
HSSP:P10081 EMBL:AY099536 IPI:IPI00481107 RefSeq:NP_775365.1
UniGene:Dr.116877 ProteinModelPortal:Q8JGR1 SMR:Q8JGR1
STRING:Q8JGR1 GeneID:192339 KEGG:dre:192339 CTD:192339
InParanoid:Q8JGR1 NextBio:20797174 ArrayExpress:Q8JGR1
Uniprot:Q8JGR1
Length = 487
Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
Identities = 143/384 (37%), Positives = 223/384 (58%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
+F+ + L+ LL+G+YA GF +PS IQ+ + P ++I Q+QS TGKTA F
Sbjct: 101 SFEELRLKPQLLQGVYAMGFNRPSKIQETAL-PMMLAEPPQNLIAQSQSRTGKTAAFVLA 159
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGVKVHACVGGTSVREDQRILS 155
+L +D + L + PT ELA Q KV+ +G Y V++ + G + ++
Sbjct: 160 MLSHVDTENKWPECLCVCPTYELALQTGKVIEQMGKHYPEVQLVYAIRGNKLERGAKLQE 219
Query: 156 SGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKI 213
+V+GTPG V D ++ + + P I++FVLDEAD M++ +G +DQ I ++LP
Sbjct: 220 Q---IVIGTPGTVLDWCQKLKFIDPKKIKVFVLDEADVMIATQGHQDQSVRIQRMLPKTC 276
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT ++ + P I +KR+E TL+ IKQ++V +E K + LC++Y
Sbjct: 277 QMLLFSATFEETVWNFAKRIVPDPNIIKLKREEETLDTIKQYYVICNSKEEKFQALCNIY 336
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ I Q++IF +TR+ WL ++ H V+ G+M R ++ FR G +VL+
Sbjct: 337 GAITIAQAMIFCHTRKTAGWLAGELSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLV 396
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGRSGRFGRKGVAINFV-TRDD 386
TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR+GRFG++G+AIN ++
Sbjct: 397 TTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMADSKFS 456
Query: 387 ERMLFDIQKFYNVVIEELPANVAD 410
L IQ +N IE+L + D
Sbjct: 457 MNTLNRIQDHFNKKIEKLDTDDLD 480
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 142/375 (37%), Positives = 208/375 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF + + +LR I G+E P+AIQ I G DV+ AQ+GTGKTA F +L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILSSGV 158
++D QALVL PTRELA Q+ + G YL + V GG+S L G
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA 133
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
VVVGTPGR+ D L R +L + VLDEADEML+ GF D + I P QV +F
Sbjct: 134 QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQVALF 193
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SATMPP +++ K+++ P + K E I Q ++ V + K++ L + E
Sbjct: 194 SATMPPAIRKLSAKYLHDPFEVTCKAKTAVAENISQSYIQVAR---KMDALTRVLEVEPF 250
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
++FV T++ + + +K+R+R + +A GD+ Q R+ + R G +L+ TD+
Sbjct: 251 EAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDIDILVATDVA 310
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARG+DV+++S V+NYD+P E+Y+HRIGR+GR GR G A+ FV+ + +L I+K
Sbjct: 311 ARGLDVERISHVLNYDIPHDTESYVHRIGRTGRAGRSGAALIFVSPRELHLLKAIEKATR 370
Query: 399 VVIEE--LPANVADL 411
+ E LP V D+
Sbjct: 371 QTLTEAQLPT-VEDV 384
>GENEDB_PFALCIPARUM|PFB0445c [details] [associations]
symbol:PFB0445c "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 496 (179.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 113/314 (35%), Positives = 182/314 (57%)
Query: 102 DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSG--V 158
D V C L LA TRELA QI+ YL V+ GG S+ + ++
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPPKIQVGV 217
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
FSATM E ++ +KF+ PV I + + +L L G+ Q +V +++++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q +IFV + + L DK+ + + S A HG ++Q R +F+ +R+L++T
Sbjct: 317 EFNQVIIFVKSVTRAITL-DKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVST 375
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQ 394
DL RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ ++D L ++Q
Sbjct: 376 DLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQ 435
Query: 395 KFYNVVIEELPANV 408
+ V I E+P +
Sbjct: 436 TRFEVAISEMPNKI 449
Score = 136 (52.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 37/86 (43%), Positives = 47/86 (54%)
Query: 20 NDLLGSD--GQDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG 76
N++L ++ G SY V+ F L+ LLR I GFE PS +QQ I G
Sbjct: 33 NNILNNNNKGGAMRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQQETIPAAITG 92
Query: 77 LDVIQQAQSGTGKTATFCSGILQQLD 102
D++ QA+SG GKTA F ILQQLD
Sbjct: 93 TDILCQAKSGMGKTAVFVLSILQQLD 118
>UNIPROTKB|Q9TY94 [details] [associations]
symbol:UAP56 "DEAD box helicase, UAP56" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
EMBL:AE001362 GenomeReviews:AE001362_GR HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K12812
ProtClustDB:CLSZ2429041 PIR:G71614 RefSeq:XP_001349607.1
ProteinModelPortal:Q9TY94 SMR:Q9TY94 EnsemblProtists:PFB0445c:mRNA
GeneID:812689 KEGG:pfa:PFB0445c EuPathDB:PlasmoDB:PF3D7_0209800
OMA:LECVINY Uniprot:Q9TY94
Length = 457
Score = 496 (179.7 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 113/314 (35%), Positives = 182/314 (57%)
Query: 102 DYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSG--V 158
D V C L LA TRELA QI+ YL V+ GG S+ + ++
Sbjct: 140 DNKFVRC--LGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYGGISMNKHIKLFKEDNIP 197
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPPKIQVGV 217
H+++GTPGR+ ++R + L D I+ FVLDE D+ L + + + IF P K QV
Sbjct: 198 HIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRSDVQKIFISTPLKKQVMF 257
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
FSATM E ++ +KF+ PV I + + +L L G+ Q +V +++++ K L ++ + L
Sbjct: 258 FSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKLQEKD-KTRKLIEILDAL 316
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q +IFV + + L DK+ + + S A HG ++Q R +F+ +R+L++T
Sbjct: 317 EFNQVIIFVKSVTRAITL-DKLLTECNFPSIAIHGGLEQQERIERYDKFKKFENRILVST 375
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDIQ 394
DL RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+A+ FV+ ++D L ++Q
Sbjct: 376 DLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVTFVSSQEDTLALNEVQ 435
Query: 395 KFYNVVIEELPANV 408
+ V I E+P +
Sbjct: 436 TRFEVAISEMPNKI 449
Score = 136 (52.9 bits), Expect = 6.1e-60, Sum P(2) = 6.1e-60
Identities = 37/86 (43%), Positives = 47/86 (54%)
Query: 20 NDLLGSD--GQDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG 76
N++L ++ G SY V+ F L+ LLR I GFE PS +QQ I G
Sbjct: 33 NNILNNNNKGGAMRGSYATVHTGGFKDFFLKPELLRAISESGFEHPSEVQQETIPAAITG 92
Query: 77 LDVIQQAQSGTGKTATFCSGILQQLD 102
D++ QA+SG GKTA F ILQQLD
Sbjct: 93 TDILCQAKSGMGKTAVFVLSILQQLD 118
>SGD|S000002242 [details] [associations]
symbol:SUB2 "Component of the TREX complex required for
nuclear mRNA export" species:4932 "Saccharomyces cerevisiae"
[GO:0006406 "mRNA export from nucleus" evidence=IMP;IDA;IPI]
[GO:0000346 "transcription export complex" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005681 "spliceosomal
complex" evidence=IEA;TAS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IGI;ISA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0000781 "chromosome, telomeric region"
evidence=IPI] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0031124 "mRNA 3'-end processing" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002242 GO:GO:0005524
EMBL:BK006938 GO:GO:0005681 GO:GO:0003723 GO:GO:0006348
GO:GO:0006368 GO:GO:0006406 GO:GO:0000398 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0000781 GO:GO:0004004
GO:GO:0006283 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0031124
GeneTree:ENSGT00660000095549 KO:K12812 GO:GO:0000346
OrthoDB:EOG4H49C6 EMBL:Z74132 EMBL:AY692907 PIR:S67620
RefSeq:NP_010199.1 ProteinModelPortal:Q07478 SMR:Q07478
DIP:DIP-5343N IntAct:Q07478 MINT:MINT-526164 STRING:Q07478
PaxDb:Q07478 PeptideAtlas:Q07478 EnsemblFungi:YDL084W GeneID:851475
KEGG:sce:YDL084W CYGD:YDL084w OMA:NNPLINC NextBio:968777
Genevestigator:Q07478 GermOnline:YDL084W Uniprot:Q07478
Length = 446
Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
Identities = 141/386 (36%), Positives = 216/386 (55%)
Query: 33 SYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 91
SY ++ T F L+ L R I GFE PS +QQ I G DV+ QA+SG GKTA
Sbjct: 55 SYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTA 114
Query: 92 TFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVRED 150
F LQQLD E +V+ RELA QI Y+ VK GGT + +D
Sbjct: 115 VFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKD 174
Query: 151 QRILSS---GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIF 206
+L + H+VV TPGR+ ++R + + +++ FV+DE D++L + + +IF
Sbjct: 175 AELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIF 234
Query: 207 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWK 265
+ P QV +FSAT+ E I R+F+ P+ I V + +LTL G++Q+++ +E+ E K
Sbjct: 235 RATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEERE-K 293
Query: 266 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 325
L L + L Q +IFV + + + LT + + + HG M Q R + F+
Sbjct: 294 NRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFK 353
Query: 326 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-R 384
R+ ++TD+ RGID+++++L INYDL + + YLHR+GR+GRFG KG+AI+FV+ +
Sbjct: 354 DFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSK 413
Query: 385 DDERMLFDIQKFYNVVIEELPANVAD 410
+DE +L IQ+ ++V I E P D
Sbjct: 414 EDEEVLAKIQERFDVKIAEFPEEGID 439
>UNIPROTKB|J9NSS1 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00530000063236 CTD:29118 EMBL:AAEX03003382
RefSeq:XP_536532.3 Ensembl:ENSCAFT00000048680 GeneID:479396
KEGG:cfa:479396 Uniprot:J9NSS1
Length = 369
Score = 607 (218.7 bits), Expect = 3.5e-59, P = 3.5e-59
Identities = 140/367 (38%), Positives = 218/367 (59%)
Query: 58 GFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLA 114
GF +PS IQ+ + P ++I Q+QSGTGKTA F +L +++ + Q L LA
Sbjct: 2 GFNRPSKIQEMAL-PMMLAHPPQNLIAQSQSGTGKTAAFVLAMLSRVNTLELFPQCLCLA 60
Query: 115 PTRELAQQIEKVMRALGDY-LGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDM-L 172
PT ELA Q +V+ +G + + V+V + G + + +++GTPG V D
Sbjct: 61 PTYELALQTGRVVERMGKFCVDVQVMYAIRGNHIPRGTDVTKQ---IIIGTPGTVLDWCF 117
Query: 173 RRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 231
+R+ + IR+FVLDEAD M+ ++GF DQ I + LP + Q+ +FSAT +
Sbjct: 118 KRKLIDLTKIRVFVLDEADVMIDTQGFSDQSIRIQRALPSECQMLLFSATFEDSVWQFAE 177
Query: 232 KFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKV 291
+ + P I ++++ELTL I+Q++V E + K + LC++Y + I Q++IF TRR
Sbjct: 178 RIIPDPNVIKLRKEELTLSNIRQYYVLCENRKDKYQALCNIYGGITIGQAIIFCQTRRNA 237
Query: 292 DWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 351
WLT +M H VS G++ + R I++ FR G +VLITT++ ARGIDV+QV++V+
Sbjct: 238 KWLTVEMMQDGHQVSLLSGELTVDQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 297
Query: 352 NYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL- 404
N+DLP +P E YLHRIGR+GRFG+KG+A N + D +L IQ +N I++L
Sbjct: 298 NFDLPVNQAEEPDYETYLHRIGRTGRFGKKGLAFNMIEVDKLPLLMKIQDHFNSSIKQLD 357
Query: 405 PANVADL 411
P ++ ++
Sbjct: 358 PEDMDEI 364
>UNIPROTKB|F1MRW7 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:DAAA02007520 IPI:IPI00867090
UniGene:Bt.13425 Ensembl:ENSBTAT00000024914 Uniprot:F1MRW7
Length = 825
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 142/384 (36%), Positives = 222/384 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAVGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L + Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P K+M +P + + + +L G+KQ++ VN K E K + L
Sbjct: 242 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKTQHLQ 301
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + S+ G+MDQN R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAEYISGNMDQNRRLDAMAKLKQFHCR 361
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDCETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 390 LFDIQKFYNVVIEELPANVA-DLL 412
+ I + + + LP + DL+
Sbjct: 422 MMKIAQKCTINLLPLPDPIPPDLM 445
>UNIPROTKB|H9KYU4 [details] [associations]
symbol:DDX25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0007286
"spermatid development" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000063236 OMA:WHFAERI EMBL:AADN02053079
Ensembl:ENSGALT00000000632 Uniprot:H9KYU4
Length = 416
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 145/385 (37%), Positives = 219/385 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKG---LDVIQQAQSGTGKTATFCSG 96
TF+ + L++ LL+G+Y GF +PS IQ + P ++I Q+QSGTGKTA F
Sbjct: 31 TFEELHLKKELLQGVYTMGFNRPSKIQANAL-PILMAHPPQNLIAQSQSGTGKTAAFVLA 89
Query: 97 ILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILS 155
+L ++ Q L LAPT ELA QI V +G + ++V V G V +L
Sbjct: 90 MLSRVKGAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGT-VLE 148
Query: 156 SGVHVVVGTPGRVFDM-LRRQSLRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKI 213
+V+GTPG + D +R+ L I +FVLDEAD M+ ++GF Q I + LP
Sbjct: 149 E--QIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADVMIDTQGFSSQSIRIQRALPKDC 206
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q+ +FSAT + + +++P+ I ++++ELTL I+Q++ E K E LC+LY
Sbjct: 207 QMLLFSATFKETLWKFALQIVSRPIIIKLRQEELTLTNIRQYYFVCRNWEQKYEALCNLY 266
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
++ I Q++IF TRR DWL+ KM H V+ ++ R +++ FR G +VLI
Sbjct: 267 GSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAMLTAELSIVQRADVIQRFRDGKEKVLI 326
Query: 334 TTDLLARGIDVQQVSLVINYDLPT----QP--ENYLHRIGRSGRFGRKGVAINFVTRDDE 387
TT++ ARGIDV QV++V+N+ LP QP E YLHRIGR+GRFG++G+A N V
Sbjct: 327 TTNVCARGIDVAQVTIVVNFGLPINRQKQPDFETYLHRIGRTGRFGKRGIAFNMVDSHSA 386
Query: 388 RMLFDIQKFYNVVIEELPANVADLL 412
++ I++ + I+ L + D L
Sbjct: 387 HLVRCIEEHFQTKIKRLDPDCMDKL 411
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 134/365 (36%), Positives = 205/365 (56%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F A+ L N++ + A G+E+PSAIQQ+ I G D+I QAQ+GTGKTA F IL +
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 67
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
+D E QAL+LAPTRELA Q+ + GV V A GG + + + +G
Sbjct: 68 IDPSKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAIRNGAQ 127
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
+VV TPGR+ D LRR + VLDEADEML GF D + IF+ +P Q +FS
Sbjct: 128 IVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFS 187
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT+P I + + P + ++ T+ I+Q H+ V ++ K + L E
Sbjct: 188 ATLPQSIRAIAERHLKDPKHVKIQSKTQTVTAIEQAHLLVHADQ-KTSAVLSLLEVEDFD 246
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
++FV T++ L + ++ + +A +GD+ QN R+ ++ + G +++ TD+ A
Sbjct: 247 ALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAA 306
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+DV +++ V N D+P PE+Y+HRIGR+GR GR+G A+ VT + RML I++
Sbjct: 307 RGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTGQ 366
Query: 400 VIEEL 404
+ E+
Sbjct: 367 KVAEV 371
>UNIPROTKB|Q9UHI6 [details] [associations]
symbol:DDX20 "Probable ATP-dependent RNA helicase DDX20"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0015030
"Cajal body" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0000244 "assembly of spliceosomal tri-snRNP" evidence=TAS]
[GO:0005856 "cytoskeleton" evidence=TAS] [GO:0000387 "spliceosomal
snRNP assembly" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0034660 "ncRNA metabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_71 Reactome:REACT_21257
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0017053
GO:GO:0005654 GO:GO:0006917 GO:GO:0005856 GO:GO:0003677
GO:GO:0005681 GO:GO:0000244 GO:GO:0000122 GO:GO:0043065
GO:GO:0015030 GO:GO:0034660 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AF171063 EMBL:AF106019 EMBL:AK001506
EMBL:AL049557 EMBL:BC011556 EMBL:AL133598 IPI:IPI00005904
PIR:T43476 RefSeq:NP_009135.4 UniGene:Hs.591405 PDB:2OXC PDB:3B7G
PDBsum:2OXC PDBsum:3B7G ProteinModelPortal:Q9UHI6 SMR:Q9UHI6
DIP:DIP-32606N IntAct:Q9UHI6 MINT:MINT-96973 STRING:Q9UHI6
PhosphoSite:Q9UHI6 DMDM:12643886 PaxDb:Q9UHI6 PeptideAtlas:Q9UHI6
PRIDE:Q9UHI6 DNASU:11218 Ensembl:ENST00000369702 GeneID:11218
KEGG:hsa:11218 UCSC:uc001ebs.3 CTD:11218 GeneCards:GC01P112298
HGNC:HGNC:2743 HPA:CAB015427 HPA:HPA005516 HPA:HPA023541 MIM:606168
neXtProt:NX_Q9UHI6 PharmGKB:PA27209 HOGENOM:HOG000112184
HOVERGEN:HBG051330 InParanoid:Q9UHI6 KO:K13131 OMA:VEDYEHY
OrthoDB:EOG4SF95N PhylomeDB:Q9UHI6 EvolutionaryTrace:Q9UHI6
GenomeRNAi:11218 NextBio:42699 ArrayExpress:Q9UHI6 Bgee:Q9UHI6
CleanEx:HS_DDX20 Genevestigator:Q9UHI6 GermOnline:ENSG00000064703
Uniprot:Q9UHI6
Length = 824
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 140/376 (37%), Positives = 218/376 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L + Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 123 SLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P K+M P + + + +L G+KQ++ VN K E K + L
Sbjct: 242 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKVFEEKTQHLQ 301
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 302 ELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCR 361
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 422 MMRIAQKCNINLLPLP 437
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 134/366 (36%), Positives = 204/366 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F++ ++ G+ A G+++P+ IQ + I P +G DVI AQ+GTGKTA + ++Q
Sbjct: 2 SFESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVIQ 61
Query: 100 Q-LDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 158
+ L + LVLAPTRELA QI + R+LG ++ + GG ++ + R L SGV
Sbjct: 62 KMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRLRSGV 121
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVF 218
VVV PGR+ D + R ++ + ++DEAD M GF+ I I + L Q +F
Sbjct: 122 DVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQTLLF 181
Query: 219 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAI 278
SATMPPE ++T + PV I + + + V K K L ++ +T
Sbjct: 182 SATMPPEVRKLTLETQTNPVTIQIGT-QAPASSVSH-SVYPVKNHQKTPLLIEILKTTET 239
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
+IF T+ + L D++ T ++ G++ QN R +M FR G+ ++L+ TD+
Sbjct: 240 KSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNFKILVATDIA 299
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARG+D+ +S VINYD+P PE+Y HRIGR+GRF R G A++ VT D M+ DIQK N
Sbjct: 300 ARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTGRDGDMVRDIQKLIN 359
Query: 399 VVIEEL 404
I+ L
Sbjct: 360 SPIQRL 365
>DICTYBASE|DDB_G0281553 [details] [associations]
symbol:helC "DEAD-box RNA helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281553 GO:GO:0007275
GO:GO:0005524 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
OMA:PQAICLA HSSP:Q9UHL0 EMBL:AF002677 RefSeq:XP_640633.1
ProteinModelPortal:Q54TF8 EnsemblProtists:DDB0215338 GeneID:8623244
KEGG:ddi:DDB_G0281553 Uniprot:Q54TF8
Length = 465
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 140/384 (36%), Positives = 229/384 (59%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLD-VIQQAQSGTGKTATFCSGIL 98
TF+ +GL+ LL+G+YA G+ KPS IQ+ + + + +I Q+QSGTGKTA F G+L
Sbjct: 71 TFEELGLKPELLKGVYAMGYNKPSKIQEAALPIIIQSPNNLIAQSQSGTGKTAAFTLGML 130
Query: 99 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGV 158
+D + QA+ ++PT+ELA Q +V+ +G + +K + + + + + +
Sbjct: 131 NCVDPSINAPQAICISPTKELALQTFEVISKIGQFSNIKPLLYI--SEIEVPKNVTNQ-- 186
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLS-RGFKDQIYDIFQLLPPKIQVGV 217
V++GTPG++ + + ++ L +++ VLDEAD ++ + +QI I +LLP ++V +
Sbjct: 187 -VIIGTPGKILENVIKKQLSVKFLKMVVLDEADFIVKMKNVPNQIAMINRLLPSNVKVCL 245
Query: 218 FSATMPPEALEITRKFMNKP-VRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
FSAT E+ +K + P I +KR EL++E I Q+ ++ E+ K L D+Y +
Sbjct: 246 FSATFSMGVEELIKKIVQDPYTSIRLKRQELSVEKIHQYFIDCGSEDNKALILSDIYGFI 305
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHG-DMDQNTRDIIMREFRSGSSRVLITT 335
++ QS++FV+T + KM H+VS +G D+ R +++F+ G S+VLITT
Sbjct: 306 SVGQSIVFVHTIATAKSVHQKMVDEGHSVSLLYGKDLTTEERFKQIKDFKDGKSKVLITT 365
Query: 336 DLLARGIDVQQVSLVINYDLPTQ------PENYLHRIGRSGRFGRKGVAINFV-TRDDER 388
++LARGID+ QVSLVINYD+P P +YLHRIGR GRFGR GVA++FV +
Sbjct: 366 NVLARGIDIPQVSLVINYDVPLDEMGKPDPVHYLHRIGRVGRFGRSGVALSFVYDQQSTN 425
Query: 389 MLFDIQKFYNVVIEELPANVADLL 412
L +I V ++EL ++ + L
Sbjct: 426 KLMNISTHLGVPLKELKSSEIESL 449
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 599 (215.9 bits), Expect = 2.5e-58, P = 2.5e-58
Identities = 139/372 (37%), Positives = 209/372 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F + L +L I G+ KP+AIQQ+ I G D+I AQ+GTGKTA+F +L+
Sbjct: 2 SFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLE 61
Query: 100 QLDYGLVEC---------QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 150
QL+ E +AL+L PTRELA Q+E + YL + A GG +E
Sbjct: 62 QLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQ 121
Query: 151 QRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
++ L GV ++V TPGR+ DM ++ L D + + VLDEAD ML GF D I I + LP
Sbjct: 122 KQRLIWGVDILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLP 181
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
Q +FSATM E + ++ ++KPV I + D+ + I+Q+ V V+K K L
Sbjct: 182 EHRQNLLFSATMSEEVRGLAKRTIHKPVEISIGADKASKPKIEQWLVTVDKAN-KSALLS 240
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+ T Q++IF+ T+ L ++ R + H Q+ R+ I+ +F+SG +
Sbjct: 241 HIITTQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIK 300
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
L+ T + ARG+D+ ++S VINYDLP Q ++Y+HRIGR+GR G G AI+ V++D+ R L
Sbjct: 301 FLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAISLVSKDNFREL 360
Query: 391 FDIQKFYNVVIE 402
I+ +IE
Sbjct: 361 CAIESRLGHIIE 372
>MGI|MGI:1858415 [details] [associations]
symbol:Ddx20 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 20"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=IPI] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IDA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1858415 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0008380
GO:GO:0003677 GO:GO:0006397 GO:GO:0005681 GO:GO:0000122
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:CH466608 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11218 HOGENOM:HOG000112184 HOVERGEN:HBG051330
KO:K13131 OMA:VEDYEHY OrthoDB:EOG4SF95N EMBL:AJ250027 EMBL:AF220454
EMBL:BC125471 EMBL:BC137721 IPI:IPI00122400 RefSeq:NP_059093.3
UniGene:Mm.272826 ProteinModelPortal:Q9JJY4 SMR:Q9JJY4
IntAct:Q9JJY4 STRING:Q9JJY4 PhosphoSite:Q9JJY4 PaxDb:Q9JJY4
PRIDE:Q9JJY4 Ensembl:ENSMUST00000090680 GeneID:53975 KEGG:mmu:53975
GeneTree:ENSGT00530000062880 InParanoid:Q059Z6 NextBio:310865
Bgee:Q9JJY4 CleanEx:MM_DDX20 Genevestigator:Q9JJY4
GermOnline:ENSMUSG00000027905 Uniprot:Q9JJY4
Length = 825
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 139/376 (36%), Positives = 217/376 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 65 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 123
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 124 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 182
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 183 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 242
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P ++M P + + + +L G+KQ++ VN K E K + L
Sbjct: 243 VSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 302
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 303 ELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 362
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M
Sbjct: 363 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 422
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 423 MMKIAQKCNINLLPLP 438
>UNIPROTKB|F1MAM8 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 GeneTree:ENSGT00530000062880 IPI:IPI00947925
RefSeq:NP_001178640.1 UniGene:Rn.137424 Ensembl:ENSRNOT00000068152
GeneID:84473 KEGG:rno:84473 NextBio:616964 ArrayExpress:F1MAM8
Uniprot:F1MAM8
Length = 824
Score = 598 (215.6 bits), Expect = 3.2e-58, P = 3.2e-58
Identities = 139/376 (36%), Positives = 217/376 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 123 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P ++M P + + + +L G+KQ++ VN K E K + L
Sbjct: 242 VSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 301
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCR 361
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M
Sbjct: 362 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 421
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 422 MMKIAQKCNINLLPLP 437
>UNIPROTKB|F1SBP3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 CTD:11218
KO:K13131 OMA:VEDYEHY GeneTree:ENSGT00530000062880 EMBL:CU466482
RefSeq:XP_001928579.1 UniGene:Ssc.6364 Ensembl:ENSSSCT00000007430
GeneID:100152786 KEGG:ssc:100152786 Uniprot:F1SBP3
Length = 832
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 139/376 (36%), Positives = 219/376 (58%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 71 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 129
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L + Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 130 SLVLENLSTQILILAPTREIAVQIHSVITAIGVKMEGLECHVFIGGTPLSQDKTRLKK-C 188
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 189 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 248
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P K+M +P + + + +L G+KQ++ VN K E K + L
Sbjct: 249 VSATYPEFLANALTKYMREPTFVRLNSSDPSLIGLKQYYKVVNSYPLAHKIFEEKAQHLQ 308
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + S+ G+M+QN R M + + R
Sbjct: 309 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPAVCISGNMNQNQRLDAMAKLKQFHCR 368
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E M
Sbjct: 369 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENM 428
Query: 390 LFDIQKFYNVVIEELP 405
+ I + ++ + LP
Sbjct: 429 MMKIAQKCHINLLLLP 444
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 135/367 (36%), Positives = 206/367 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F A+GL L + + G++ PS IQ + I G DV+ AQ+GTGKTA F +L+
Sbjct: 2 SFSALGLSAPLQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
Query: 100 QLDYGLV----ECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
L G + +ALVL PTRELA Q+ + + G YL ++ GG + L
Sbjct: 62 LLAKGHKAKSGQTRALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLR 121
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV V+V TPGR+ D++++ +++ + + I VLDEAD ML GF I I LLP K Q
Sbjct: 122 HGVDVLVATPGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQN 181
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT E E+ + +N PV I V +KQ+ V+K + K L L +
Sbjct: 182 LMFSATFSDEIRELAKGLVNHPVEISVTPRNAAATTVKQWICPVDKTQ-KSALLIQLIKQ 240
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q ++F T+ + L + + + +A HG+ Q R + +F+SG RVL+ T
Sbjct: 241 ENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVAT 300
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ ARG+D+ Q+ V+N+DLP PE+Y+HRIGR+GR G G A++ V+ ++ ++L DI++
Sbjct: 301 DIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKLLKDIER 360
Query: 396 FYNVVIE 402
N V+E
Sbjct: 361 LINRVLE 367
>DICTYBASE|DDB_G0269932 [details] [associations]
symbol:uap56 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=ISS] [GO:0000348 "mRNA
branch site recognition" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0269932
GO:GO:0005524 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0005681 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12812 GO:GO:0000348 RefSeq:XP_646415.1
ProteinModelPortal:Q55CR6 SMR:Q55CR6 PRIDE:Q55CR6
EnsemblProtists:DDB0233387 GeneID:8617372 KEGG:ddi:DDB_G0269932
InParanoid:Q55CR6 OMA:GGANMNP ProtClustDB:CLSZ2429041
Uniprot:Q55CR6
Length = 428
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 145/412 (35%), Positives = 229/412 (55%)
Query: 4 LAEGSQFDARQFDARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLL-----RGIYAYG 58
++E ++++ + ND+ +D ++ + + + + G +E LL R I G
Sbjct: 10 ISELAEYEEESDEEVQNDV--TDTKNKTANRADTHVAMHSSGFREFLLKPELERVIGDCG 67
Query: 59 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRE 118
FE PS +Q I G DVI QA+SG GKTA F LQQ+D LVL TRE
Sbjct: 68 FEHPSEVQNECIPQAILGTDVICQAKSGMGKTAVFVLSTLQQIDNNPNGITTLVLCNTRE 127
Query: 119 LAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQS 176
LA QI YL VK GG V+ + ++ ++++GTPGR+ + +
Sbjct: 128 LAYQICDEFDRFTKYLPNVKTAVIYGGIPVQTHKDLIKEKKPNIIIGTPGRILQLASEGA 187
Query: 177 LRPDNIRIFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMN 235
L I+ F+LDE D ML S + + IF+L+P QV +FSAT+ I +KFMN
Sbjct: 188 LSLKEIKQFILDECDTMLESLDMRKDVQKIFKLIPANKQVMMFSATLSDTIRPICKKFMN 247
Query: 236 KPVRILVKR-DELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWL 294
P+ I + +LTL G++Q++V + +E+ K + L +L ++L Q+VIFV + R+ D L
Sbjct: 248 NPLEIYINDGSKLTLHGLQQYYVPITEEQ-KNKKLIELLDSLDFNQAVIFVKSVRRADAL 306
Query: 295 TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 354
++ H D+DQ R R+F++ SR+++ T++ RGID+++V++VINYD
Sbjct: 307 NKILQDIGFPSICIHRDLDQKDRIEQYRKFKNFESRIMVATNIFGRGIDIERVNVVINYD 366
Query: 355 LPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPA 406
+ + YLHR+GR+GRFG KG+AI+FV ++ +L +Q + V I+EL A
Sbjct: 367 MAESADTYLHRVGRAGRFGTKGLAISFVPSKEDPVLEQVQSKFVVSIKELVA 418
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 133/352 (37%), Positives = 202/352 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++ L+ +LR + + G+ + + IQ + G DVI +A++G+GKTA F G+L +
Sbjct: 6 FSSLRLKAPMLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSR 65
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
LD QALVL PTRELA Q+ K +R L + +K+ GG L G H
Sbjct: 66 LDALSFRVQALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAH 125
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VV+GTPGR+ D LRR SL +R VLDEAD ML GF+D I + PPK Q +FS
Sbjct: 126 VVIGTPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFS 185
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEG-IKQFHVNVEKEEWKLETLCDLYETLAI 278
AT P ++ +PV + V DE+ EG I+Q V+ + ++E + +
Sbjct: 186 ATYPDSIAAMSAGVQREPVEVSV--DEVHGEGAIEQVFYEVDSGQ-RIEAVERILGHYRP 242
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
++IF NT+ + + + + R + A HGD+DQ RD ++ F + S+ VL+ TD+
Sbjct: 243 ESALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVA 302
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
ARG+D++++S VINY+L PE + HRIGR+GR G +G+A++ VT + R++
Sbjct: 303 ARGLDIKELSAVINYELTRNPEVHTHRIGRTGRAGERGLAVSLVTPRESRLI 354
>UNIPROTKB|F1PXG6 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000021679 Uniprot:F1PXG6
Length = 825
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 138/376 (36%), Positives = 217/376 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P K+M P + + + +L G+KQ++ VN K E K + L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + ++ G+M+QN R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E +
Sbjct: 364 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENV 423
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 424 MMKIAQKCNINLLPLP 439
>UNIPROTKB|J9P828 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AAEX03011088 EMBL:AAEX03011089
Ensembl:ENSCAFT00000050085 Uniprot:J9P828
Length = 825
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 138/376 (36%), Positives = 217/376 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 66 FESLLLSRPVLDGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 124
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 125 SLVLENQSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 183
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 184 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 243
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P K+M P + + + +L G+KQ++ VN K E K + L
Sbjct: 244 VSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHLQ 303
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L D + ++ G+M+QN R M + + R
Sbjct: 304 ELFSRIPFNQALVFSNLHSRAQHLADILSAKGFPAECISGNMNQNQRLDAMAKLKHFHCR 363
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E +
Sbjct: 364 VLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENV 423
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 424 MMKIAQKCNINLLPLP 439
>UNIPROTKB|I3L0H8 [details] [associations]
symbol:DDX19A "ATP-dependent RNA helicase DDX19A"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:25628 EMBL:AC012184 ProteinModelPortal:I3L0H8 SMR:I3L0H8
PRIDE:I3L0H8 Ensembl:ENST00000417604 Bgee:I3L0H8 Uniprot:I3L0H8
Length = 447
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 135/343 (39%), Positives = 205/343 (59%)
Query: 78 DVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGD-YLGV 136
++I Q+QSGTGKTA F +L +++ Q L L+PT ELA Q KV+ +G Y +
Sbjct: 101 NLIAQSQSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPEL 160
Query: 137 KVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRR-QSLRPDNIRIFVLDEADEMLS 195
K+ V G + Q+I +V+GTPG V D + + + P I++FVLDEAD M++
Sbjct: 161 KLAYAVRGNKLERGQKISEQ---IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIA 217
Query: 196 -RGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 254
+G +DQ I ++LP Q+ +FSAT + +K + P I +KR+E TL+ IKQ
Sbjct: 218 TQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEETLDTIKQ 277
Query: 255 FHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 314
++V + K + LC+LY + I Q++IF +TR+ WL ++ H V+ G+M
Sbjct: 278 YYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMV 337
Query: 315 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ----PEN--YLHRIGR 368
R ++ FR G +VL+TT++ ARGIDV+QVS+VIN+DLP P+N YLHRIGR
Sbjct: 338 EQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGR 397
Query: 369 SGRFGRKGVAINFV-TRDDERMLFDIQKFYNVVIEELPANVAD 410
+GRFG++G+A+N V ++ +L IQ+ +N IE L + D
Sbjct: 398 TGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 440
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
Identities = 132/372 (35%), Positives = 207/372 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+FD++GL ++LR + G+ +P+ IQQ+ I +G D++ AQ+GTGKTA F +LQ
Sbjct: 2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQ 61
Query: 100 QL------DYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
L G +AL+L PTRELA QI + +R YL ++ GG S+
Sbjct: 62 HLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMK 121
Query: 154 LSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
L GV V+V TPGR+ D+ + +++ D + I VLDEAD ML GF I + LP K
Sbjct: 122 LRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKR 181
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q +FSAT + + K ++ P+ I V R + + Q HV+ ++ K E L +
Sbjct: 182 QNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQ-HVHFVDKKRKRELLSHMI 240
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
Q ++F T+ + L +++ +A HG+ Q R + +F+SG RVL+
Sbjct: 241 GKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV 300
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+D++++ V+NY+LP PE+Y+HRIGR+GR G A++ V D+ ++L DI
Sbjct: 301 ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI 360
Query: 394 QKFYNVVIEELP 405
+K +E+P
Sbjct: 361 EKLLK---KEIP 369
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 135/368 (36%), Positives = 208/368 (56%)
Query: 37 VY-DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
VY F +G+ E + G + + IQ++ I G D+I QA++GTGKT F
Sbjct: 2 VYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVL 61
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIE-KVMRALGDYLGVKVHACVGGTSVREDQRIL 154
IL+++D + QAL++APTRELA QI ++ + L + V A GG V + R L
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
H+VV TPGR+ D +RR+++ N+ VLDEAD+ML GF I DI P Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+FSAT+P + ++ +++M++P I V+ +E+T++ I+Q V + K + L + +
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ-RVIETTDRAKPDALRFVMD 240
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
+VIF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARG+DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV DE+ L +I+
Sbjct: 301 TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE 360
Query: 395 KFYNVVIE 402
K I+
Sbjct: 361 KTLGAPIQ 368
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 135/368 (36%), Positives = 208/368 (56%)
Query: 37 VY-DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
VY F +G+ E + G + + IQ++ I G D+I QA++GTGKT F
Sbjct: 2 VYLKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVL 61
Query: 96 GILQQLDYGLVECQALVLAPTRELAQQIE-KVMRALGDYLGVKVHACVGGTSVREDQRIL 154
IL+++D + QAL++APTRELA QI ++ + L + V A GG V + R L
Sbjct: 62 PILEKIDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRKL 121
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
H+VV TPGR+ D +RR+++ N+ VLDEAD+ML GF I DI P Q
Sbjct: 122 KGNTHIVVATPGRLLDHIRRETIDLSNLSTIVLDEADQMLYFGFLYDIEDILDETPGSKQ 181
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+FSAT+P + ++ +++M++P I V+ +E+T++ I+Q V + K + L + +
Sbjct: 182 TMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQ-RVIETTDRAKPDALRFVMD 240
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
+VIF T+ + L D ++ + + HGD+ Q R+ +M+ FR + LI
Sbjct: 241 RDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAKIQYLIA 300
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARG+DV V+ V NYD+P E+Y+HRIGR+GR G G+AI FV DE+ L +I+
Sbjct: 301 TDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEKHLEEIE 360
Query: 395 KFYNVVIE 402
K I+
Sbjct: 361 KTLGAPIQ 368
>UNIPROTKB|E9PSX0 [details] [associations]
symbol:Ddx20 "Protein Ddx20" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:621744 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00554119
Ensembl:ENSRNOT00000020984 ArrayExpress:E9PSX0 Uniprot:E9PSX0
Length = 826
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 139/378 (36%), Positives = 218/378 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F+++ L +L G+ A GFE+PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 64 FESLLLSRPVLEGLRAAGFERPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 122
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ A+G + G++ H +GGT + +D+ L
Sbjct: 123 SLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK-C 181
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L P +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 182 HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLA 241
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFH--VN----VEKE-EWKLETLC 270
SAT P ++M P + + + +L G+KQ++ VN K E K + L
Sbjct: 242 VSATYPEILANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQ 301
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT--HGDMDQNTRDIIMREFRSGS 328
+L+ + Q+++F N + L D + S+ +G+M+QN R M + +
Sbjct: 302 ELFSKIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNGNMNQNQRLDAMAKLKQFH 361
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDE 387
RVLI+TDL +RGID ++V+LV+N D+P E Y+HRIGR+GRFG G+ + + R ++E
Sbjct: 362 CRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEE 421
Query: 388 RMLFDIQKFYNVVIEELP 405
M+ I + N+ + LP
Sbjct: 422 NMMMKIAQKCNINLLPLP 439
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 130/368 (35%), Positives = 209/368 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+++ + QALVL PTRELA Q+++ + +G + +K A G + + L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
+VVGTPGRV D + + +L + ++ V+DEADEML+ GF DQ+ I LP K +FS
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT+P + ++R +MN P I +K +T + I+ V +EE KL L D+ T+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENP 242
Query: 280 QS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
S +IF T+ VD + ++ ++ HG M Q R +M +FR G R L+ TD+
Sbjct: 243 DSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVA 302
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARGID+ ++ VINYD+P + E+Y+HR GR+GR G G AI F+T ++R L +I+ +
Sbjct: 303 ARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIG 362
Query: 399 VVIEELPA 406
I + A
Sbjct: 363 FAIPKANA 370
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
Identities = 130/368 (35%), Positives = 209/368 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F L + + R + G+E P+ +Q I + D++ ++Q+G+GKTA+F + +
Sbjct: 5 SFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCE 64
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
+++ + QALVL PTRELA Q+++ + +G + +K A G + + L H
Sbjct: 65 MVEWEENKPQALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYGKSPFARQKLELKQKTH 124
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
+VVGTPGRV D + + +L + ++ V+DEADEML+ GF DQ+ I LP K +FS
Sbjct: 125 IVVGTPGRVLDHIEKGTLSLERLKYLVIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFS 184
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT+P + ++R +MN P I +K +T + I+ V +EE KL L D+ T+
Sbjct: 185 ATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEVREEE-KLSLLKDV-TTIENP 242
Query: 280 QS-VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
S +IF T+ VD + ++ ++ HG M Q R +M +FR G R L+ TD+
Sbjct: 243 DSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGKFRYLVATDVA 302
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARGID+ ++ VINYD+P + E+Y+HR GR+GR G G AI F+T ++R L +I+ +
Sbjct: 303 ARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDRFLEEIEAYIG 362
Query: 399 VVIEELPA 406
I + A
Sbjct: 363 FAIPKANA 370
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 137/379 (36%), Positives = 212/379 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF + L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQ
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 100 QLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
QL + C+ ALVL PTRELAQQ+ K G + V + GG S ++ L
Sbjct: 66 QL-ISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV +++ TPGR+ D+LR +S+ NI V DEAD ML GFK++I I Q LP Q
Sbjct: 125 VGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQT 184
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT + ++++ + +P + + + ++Q V+ + K E L +
Sbjct: 185 LLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGS 243
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Q ++F T++ D L +M ++D S A HGD Q R+ + EF+ G R LI
Sbjct: 244 RNWKQVLVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIA 302
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARGID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ +E +L I+
Sbjct: 303 TDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIE 362
Query: 395 KFYNV-VIEE-LPANVADL 411
+ ++ ++++ LP DL
Sbjct: 363 ELLDIQLLQQWLPGYELDL 381
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 583 (210.3 bits), Expect = 1.2e-56, P = 1.2e-56
Identities = 137/379 (36%), Positives = 212/379 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF + L LL+ I +++P+ IQ++ I DV+ +AQ+GTGKTA F ILQ
Sbjct: 6 TFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQ 65
Query: 100 QLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
QL + C+ ALVL PTRELAQQ+ K G + V + GG S ++ L
Sbjct: 66 QL-ISVQPCKPELRALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV +++ TPGR+ D+LR +S+ NI V DEAD ML GFK++I I Q LP Q
Sbjct: 125 VGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQT 184
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT + ++++ + +P + + + ++Q V+ + K E L +
Sbjct: 185 LLFSATFADDIYKMSKNILVEPKMVEIDEKNKAADDVEQLVYGVDADR-KRELTSFLIGS 243
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVS-ATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Q ++F T++ D L +M ++D S A HGD Q R+ + EF+ G R LI
Sbjct: 244 RNWKQVLVFTRTKQCADDLAKEM-TKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIA 302
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARGID++ +S VINY+LP E+Y+HRIGR+ R G G+A++ V+ +E +L I+
Sbjct: 303 TDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLVSPGEEWLLTAIE 362
Query: 395 KFYNV-VIEE-LPANVADL 411
+ ++ ++++ LP DL
Sbjct: 363 ELLDIQLLQQWLPGYELDL 381
>UNIPROTKB|J3QLN6 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000583802
Uniprot:J3QLN6
Length = 163
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 116/163 (71%), Positives = 132/163 (80%)
Query: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY 103
M L E+LLRGIYAYGFEKPSAIQQR I+P KG DVI QAQSGTGKTATF ILQQ++
Sbjct: 1 MNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIEL 60
Query: 104 GLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR-EDQRILSSGVHVVV 162
L QALVLAPTRELAQQI+KV+ ALGDY+G HAC+GGT+VR E Q++ H++V
Sbjct: 61 DLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIV 120
Query: 163 GTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDI 205
GTPGRVFDML R+ L P I++FVLDEADEMLSRGFKDQIYDI
Sbjct: 121 GTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDI 163
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 133/377 (35%), Positives = 212/377 (56%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L E +++G+ GF + IQ++ + G DV QAQ+GTGKTA F + +
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 101 L---DYG--LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
L G +A++LAPTREL QIEK + LG + G + A GG + + L
Sbjct: 63 LLRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQKNALK 122
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP--KI 213
G VVVGTPGR+ D L+++ I + V+DEAD M GF + I + LPP K
Sbjct: 123 EGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLPPYDKR 182
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q +FSAT+ +E+ +FMN P ++ V +++T E ++Q +V ++E K L L
Sbjct: 183 QNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAERVEQVLYHVGRKE-KFPLLLGLL 241
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ +++IFVNT+R+ ++L +++ + D GD++Q R I+ +F+SG ++I
Sbjct: 242 RKEGMERTMIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFKSGKLPIMI 301
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ +RG+ + VS VINYDLP E+Y+HRIGR+ R G +G AI+ DE F +
Sbjct: 302 ATDVASRGLHIDGVSHVINYDLPQDAEDYVHRIGRTARAGAEGKAISMA---DEDGAFHL 358
Query: 394 QKFYNVVIEELPANVAD 410
+ + + +++P A+
Sbjct: 359 EAIHEYIKDKIPVEWAE 375
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 132/365 (36%), Positives = 196/365 (53%)
Query: 39 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 98
++F A+ L+ LL + GF + IQ + + KG DVI Q ++G+GKTA F G+L
Sbjct: 4 NSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVL 63
Query: 99 QQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSG 157
L+ QALVL PTRELA Q+ +R LG + +KV GG + L G
Sbjct: 64 SNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHG 123
Query: 158 VHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 217
H++VGTPGR+ D L + + + VLDEAD ML GF++ + I P + Q +
Sbjct: 124 AHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLL 183
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLA 277
FSAT P +I + + I V+ T I+Q+ VE + E L L
Sbjct: 184 FSATYPASIEQIAQSVTRNALMIKVEATHDT-SSIRQYFYKVEGSAARDEALETLLLHHQ 242
Query: 278 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 337
T SV+F NT+R+V + D + +V HGDM+Q RD + +F + S +L+ TD+
Sbjct: 243 PTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDV 302
Query: 338 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 397
ARG+DV + V NYDL PE ++HRIGR+GR G KG+A +F + ++ + I ++
Sbjct: 303 AARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYM 362
Query: 398 NVVIE 402
++ IE
Sbjct: 363 DIAIE 367
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 150/425 (35%), Positives = 228/425 (53%)
Query: 3 GLAEGSQFDARQFDARMNDLLGSDGQDFFTSYDEVYDTFDAMGLQENLLRGIYAYGFEKP 62
GL++ ++D D N++ DG++ S + L + L + G
Sbjct: 78 GLSDHDEYD---LDGDNNNVEADDGEELAIS---------KLSLPQRLEESLEKRGITHL 125
Query: 63 SAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-----DYGLVECQA-----LV 112
IQ+ +VP +G D+I +A++GTGKT F I+++L DY LV
Sbjct: 126 FPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLV 185
Query: 113 LAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILSSGVHVVVGTPGRVFDM 171
LAPTRELA+Q+EK ++ YL CV GG S Q L+ GV VVVGTPGR+ D+
Sbjct: 186 LAPTRELAKQVEKEIKESAPYLST---VCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDL 242
Query: 172 LRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITR 231
+ +SL+ + VLDEAD+ML+ GF++ + I + LP K Q +FSATMP ++ R
Sbjct: 243 IEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLAR 302
Query: 232 KFMNKPVRI-LV-KRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT-QSVIFVNTR 288
K+++ P+ I LV +DE EGIK + + K L DL A ++++F T+
Sbjct: 303 KYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTS-KRTILSDLITVYAKGGKTIVFTQTK 361
Query: 289 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 348
R D ++ + S A HGD+ Q+ R+ + FR G VL+ TD+ +RG+D+ V
Sbjct: 362 RDADEVSLAL-SNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVD 420
Query: 349 LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEEL-PAN 407
LVI+Y+LP PE ++HR GR+GR G++G AI T +R + +++ E + P
Sbjct: 421 LVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPT 480
Query: 408 VADLL 412
V DLL
Sbjct: 481 VGDLL 485
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 136/379 (35%), Positives = 202/379 (53%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F +GL E LL+ + G+E PS IQ + I G DV+ AQ+GTGKTA F +LQ+
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 101 LD------YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 154
L +AL+L PTRELA QI + + G YL + GG + L
Sbjct: 68 LSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARL 127
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
GV V+V TPGR+ D+ +++++ + +F+LDEAD ML GF I + LP Q
Sbjct: 128 RQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQ 187
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+FSAT PE + + +N P+ I V + T E + Q+ V+K+ K L L +
Sbjct: 188 NLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKR-KPAVLTHLIK 246
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Q ++F T+ + LT + + T +A HG+ Q R + F+ GS ++L+
Sbjct: 247 ENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKILVA 306
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI- 393
TD+ ARGID+ + V+N+DLP PE+Y+HRIGR+ R G G A++ V D+ +L+ I
Sbjct: 307 TDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQALSLVCADELDLLWGIE 366
Query: 394 ----QKFYNVVIEE-LPAN 407
Q VIE+ +PAN
Sbjct: 367 HVIQQHIERKVIEKFIPAN 385
>TAIR|locus:2101993 [details] [associations]
symbol:LOS4 "LOW EXPRESSION OF OSMOTICALLY RESPONSIVE
GENES 4" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0016973 "poly(A)+ mRNA export from nucleus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006457 "protein folding"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0051604 "protein maturation" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0009737 GO:GO:0005737 GO:GO:0005635 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009409 GO:GO:0009408 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
GO:GO:0008026 EMBL:AL132958 eggNOG:COG0513 HOGENOM:HOG000268797
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GO:GO:0016973 EMBL:AY057548 EMBL:BT002444 EMBL:BT008867
IPI:IPI00533725 PIR:T46157 RefSeq:NP_190879.1 UniGene:At.35224
UniGene:At.675 ProteinModelPortal:Q93ZG7 SMR:Q93ZG7 PaxDb:Q93ZG7
PRIDE:Q93ZG7 EnsemblPlants:AT3G53110.1 GeneID:824477
KEGG:ath:AT3G53110 GeneFarm:1014 TAIR:At3g53110 InParanoid:Q93ZG7
OMA:ESATTFE PhylomeDB:Q93ZG7 ProtClustDB:CLSN2684906
Genevestigator:Q93ZG7 GermOnline:AT3G53110 Uniprot:Q93ZG7
Length = 496
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 142/397 (35%), Positives = 227/397 (57%)
Query: 32 TSYDEVYDT---FDAMGLQENLLRGIYA-YGFEKPSAIQQRGI----VPFCKGLDVIQQA 83
TS D Y + F+ + L L++G+Y FEKPS IQ + P K L I QA
Sbjct: 81 TSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHL--IAQA 138
Query: 84 QSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVG 143
+G+GKT F G+L ++D L E QAL + PTRELA Q +V++ +G + G+ V
Sbjct: 139 HNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQNMEVLQKMGKFTGITAELAVP 198
Query: 144 GTSVREDQRILSSGV--HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKD 200
++ + V HVV+GTPG + + + L ++++I V DEAD ML+ GF+D
Sbjct: 199 DSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRD 258
Query: 201 QIYDIFQ---LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV 257
I + + P QV +FSAT + + + P ++ VKR++L L+ +KQ+ V
Sbjct: 259 DSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKV 318
Query: 258 NVEKEEWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 316
KE+ K+E + D + E I Q++IFV T+ + + + V++ HG++ ++
Sbjct: 319 VCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESD 378
Query: 317 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPT-----QP--ENYLHRIGRS 369
RD I++EF+ ++VLI TD++ARG D Q+V+LV+NY+LPT +P E YLHR+GR+
Sbjct: 379 RDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRA 438
Query: 370 GRFGRKGVAINFVTRD--DERMLFDIQKFYNVVIEEL 404
GRFGRKG N + D D+ ++ I+K++ ++E+
Sbjct: 439 GRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEI 475
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 131/369 (35%), Positives = 208/369 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF + L ++L+ + A G+ +P+ +Q + + +D++ AQ+GTGKTA F LQ
Sbjct: 2 TFAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQ 61
Query: 100 QLD---YGLVEC-QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+L G + LVL PTRELAQQ+ +R G ++ V+ A +GG R+LS
Sbjct: 62 RLSSPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLS 121
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
+ V +V TPGR+ D+L R+SL + + VLDEAD ML GF D + I P Q
Sbjct: 122 APVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQT 181
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ-FHVNVEKEEWKLETLCDLYE 274
+F+ATM + + + +P RI + + T E I+Q HV + K L L
Sbjct: 182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEHIEQRLHV-ADDLHHKNRLLRHLIT 240
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
++ +++IF T+R + L +++++ H+ +A HGDM QN R+ + + G R+L+
Sbjct: 241 DESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVA 300
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARG+DV +S VIN+DLP E+Y+HRIGR+GR G G+AI+F + ++ L I+
Sbjct: 301 TDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISFASLNEVNYLARIE 360
Query: 395 KFYNVVIEE 403
++ + E
Sbjct: 361 RYIGQTLPE 369
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/373 (36%), Positives = 206/373 (55%)
Query: 31 FTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 90
F SY + +F+ +GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKT
Sbjct: 5 FRSY---FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKT 61
Query: 91 ATFCSGILQQLDYGLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 142
A F +LQ+L Q AL+L PTRELA Q+ + +RA G YL +K
Sbjct: 62 AGFTLPLLQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVH 121
Query: 143 GGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQI 202
GG S++ L GV ++V TPGR+ D++ + L + FVLDEAD ML GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKE 262
I +LLP Q +FSAT E E+T K ++ P I V R I V+++
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQ 241
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
K E L + + Q ++F T+ + L+ ++ S + +A HG+ Q R +
Sbjct: 242 R-KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ G RVL+ TD+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360
Query: 383 TRDDERMLFDIQK 395
+ D+ R+L DI+K
Sbjct: 361 SGDEVRLLRDIEK 373
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 136/373 (36%), Positives = 206/373 (55%)
Query: 31 FTSYDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKT 90
F SY + +F+ +GL LLR I G+ +P+ +Q++ I + DV+ AQ+GTGKT
Sbjct: 5 FRSY---FMSFEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKT 61
Query: 91 ATFCSGILQQLDYGLVECQ--------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV 142
A F +LQ+L Q AL+L PTRELA Q+ + +RA G YL +K
Sbjct: 62 AGFTLPLLQRLFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVH 121
Query: 143 GGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQI 202
GG S++ L GV ++V TPGR+ D++ + L + FVLDEAD ML GF I
Sbjct: 122 GGVSIKPQINHLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDI 181
Query: 203 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKE 262
I +LLP Q +FSAT E E+T K ++ P I V R I V+++
Sbjct: 182 RRILKLLPESRQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAARITHVVHPVDRQ 241
Query: 263 EWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 322
K E L + + Q ++F T+ + L+ ++ S + +A HG+ Q R +
Sbjct: 242 R-KRELLSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALT 300
Query: 323 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
+F+ G RVL+ TD+ ARG+D+ ++ VIN++LP ++Y+HR+GR+GR GVAI+ V
Sbjct: 301 QFKQGKIRVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLV 360
Query: 383 TRDDERMLFDIQK 395
+ D+ R+L DI+K
Sbjct: 361 SGDEVRLLRDIEK 373
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 570 (205.7 bits), Expect = 2.9e-55, P = 2.9e-55
Identities = 144/384 (37%), Positives = 200/384 (52%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L +L+ I G+E P+ IQ I P +G DV+ AQ+GTGKTA+F ++
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 101 LDYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSG 157
L G + +LVL PTRELA Q+ + +L + +GG S +E ++ G
Sbjct: 64 LARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALIDRG 123
Query: 158 VHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 217
V V++ TPGR+ D R L ++I V+DEAD ML GF I IF L P Q
Sbjct: 124 VDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQTLF 183
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHV-------NVEKEEWK--LET 268
FSATM PE IT F++ P RI V R E I+Q V + E E + L
Sbjct: 184 FSATMAPEIERITNTFLSAPARIEVARQATASETIEQGVVLFKGSRRDREASEKRAVLRA 243
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L D E T ++IF N + VD + ++ + + HGD+DQ+ R + FR G
Sbjct: 244 LIDA-EGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFREGK 302
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
R+L+ +D+ ARG+DV VS V N+D+P PE+Y+HRIGR+GR GR G AI DE+
Sbjct: 303 LRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCIPRDEK 362
Query: 389 MLFDIQKFYNVVIEEL--PANVAD 410
L I+K I L PA +
Sbjct: 363 ALDAIEKLIQKDIPRLENPARTEE 386
>UNIPROTKB|F1NRN3 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00820769
ProteinModelPortal:F1NRN3 Ensembl:ENSGALT00000002285 Uniprot:F1NRN3
Length = 676
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 134/376 (35%), Positives = 211/376 (56%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F ++ L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 23 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 81
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ +G + G++ H +GGT + +D+ L
Sbjct: 82 ALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-C 140
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQVGV 217
H+ VG+PGR+ ++ L +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 141 HIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQMLA 200
Query: 218 FSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKE-------EWKLETLC 270
SAT P +M +P + + + +L G+KQ++ V E K + L
Sbjct: 201 VSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQHLQ 260
Query: 271 DLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
+L+ + Q+++F N + L + + SR G M+Q+ R M + + R
Sbjct: 261 ELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFHCR 320
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERM 389
VLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R ++E M
Sbjct: 321 VLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEENM 380
Query: 390 LFDIQKFYNVVIEELP 405
+ I + N+ + LP
Sbjct: 381 MMKIAQKCNLQLLPLP 396
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 568 (205.0 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 130/379 (34%), Positives = 195/379 (51%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF GL EN+L+ + G+ P+ IQ+ I G DV AQ+GTGKTA F ++Q
Sbjct: 5 TFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQ 64
Query: 100 QLDYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
+L G + L+L PTRELA Q+ + G YL + + +GG S +E + +L
Sbjct: 65 RLSTGRARARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQR 124
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV V++ TPGR+ D R L + ++DEAD ML GF I I LP Q
Sbjct: 125 GVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQTL 184
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLE--TLCDLYE 274
+FSAT P + + + F P +I V R T E I QF V + + K L + E
Sbjct: 185 LFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRTALRRVIE 244
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
+ ++F N + +VD + + H + HGD+ Q+ R ++ FR G ++L+
Sbjct: 245 ATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLLVA 304
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFDI 393
+D+ ARG+D+ V V N+ P + E+Y+HRIGR+GR GR G + VT DD+ F +
Sbjct: 305 SDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDKSWGFVV 364
Query: 394 QKFYNVVIEELPANVADLL 412
+ V E +P + + L
Sbjct: 365 KMIKKDVPEFMPEGLLEEL 383
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 134/368 (36%), Positives = 203/368 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +GL LL + + +P+ IQ R I G D+I A +G+GKTATF +LQ
Sbjct: 9 TFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGKTATFALPMLQ 68
Query: 100 QLDYGLVE---------CQALVLAPTRELAQQIEKVMRALGDYLG--VKVHACVGGTSVR 148
+L + LVL PTRELA+Q+ +++ + +K A GG SV
Sbjct: 69 KLREDISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGGVSVN 128
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
L GV ++V TPGR+ D++ +++ D ++ VLDEAD MLS GF +++ + L
Sbjct: 129 IQMLALRGGVDILVATPGRLLDLISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLAL 188
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVEKEEWKLE 267
P K Q +FSAT P + +T++ +N P+ I L D TL + F VN K E K
Sbjct: 189 TPKKKQTLLFSATFPEQVTTLTQELLNNPIEIQLQSADASTLVQ-RVFTVN--KGE-KTA 244
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
L L + Q++IFVN + + L +K+ R T + HGD Q+ R ++ F++G
Sbjct: 245 VLAHLIQQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAG 304
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
VLI TD+ ARG+D++++ +VIN++LP P +Y+HRIGRSGR G G+AI+ + +D
Sbjct: 305 DIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAGEVGLAISLIDHEDY 364
Query: 388 RMLFDIQK 395
I+K
Sbjct: 365 HHFSVIEK 372
>UNIPROTKB|J3KS25 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1 Ensembl:ENST00000585024
Uniprot:J3KS25
Length = 188
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 116/183 (63%), Positives = 139/183 (75%)
Query: 16 DARMNDLLGSDGQDFFTS-YDEVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC 74
D+R N G + + S ++E+ D+FD M L E+LLRGIYAYGFEKPSAIQQR I+P
Sbjct: 6 DSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCI 65
Query: 75 KGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL 134
KG DVI QAQSGTGKTATF ILQQ++ L QALVLAPTRELAQQI+KV+ ALGDY+
Sbjct: 66 KGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM 125
Query: 135 GVKVHACVGGTSVR-EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEM 193
G HAC+GGT+VR E Q++ H++VGTPGRVFDML R+ L P I++FVLDEADEM
Sbjct: 126 GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEM 185
Query: 194 LSR 196
LSR
Sbjct: 186 LSR 188
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 134/369 (36%), Positives = 194/369 (52%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F++ +LR I G++K + IQQ+ I +G DV+ AQ+GTGKTA F ILQ+
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 101 LDYGLVEC-----QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+ E + L+L PTRELA Q+ + + A YL V GG V + L
Sbjct: 63 MVENPSETLKSNTRVLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQKLK 122
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
G ++V TPGR+ + L +L ++ VLDEAD ML GF I I Q + K Q
Sbjct: 123 RGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKRQN 182
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT ++ + M KP I + T + + Q VE+ K E L +L
Sbjct: 183 LLFSATFSSAVKKLANEMMIKPQVISADKQNTTADTVSQVVYPVEQRR-KRELLSELIGK 241
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q ++F TR D L ++ HG+ Q +R +REF SG RVL+ T
Sbjct: 242 KNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKVRVLVAT 301
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
++ ARG+D+ + V+N+DLP E+Y+HRIGR+GR G+ GVAI+FV+R++ER L DI+K
Sbjct: 302 EVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERTLADIEK 361
Query: 396 FYNVVIEEL 404
I +
Sbjct: 362 LIGQKIRRI 370
>ZFIN|ZDB-GENE-030131-202 [details] [associations]
symbol:ddx20 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 20" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-202
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 EMBL:BX664742 IPI:IPI00890438
Ensembl:ENSDART00000087037 Ensembl:ENSDART00000134226
Uniprot:F1R1C1
Length = 789
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 134/370 (36%), Positives = 211/370 (57%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F ++ L + +L G+ A GF++PS IQ + I P + GLD+I QA+SGTGKT F + L
Sbjct: 56 FSSLLLSKPVLEGLSASGFQRPSPIQLKAI-PLGRCGLDLIVQAKSGTGKTCVFTTIALD 114
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q LVLAPTRE+A QI V+ A+G + G++ H +GG + +D++ L
Sbjct: 115 SLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHVFIGGRPISQDKQHLKK-C 173
Query: 159 HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEML----SRGFKDQIYDIFQLLPPKIQ 214
H+ +G+PGR+ ++ +L +IR+FVLDEAD++L S F++QI I+ LP Q
Sbjct: 174 HIAIGSPGRIKQLIEMGALMVSSIRLFVLDEADKLLEDDSSSSFQEQINWIYSSLPANKQ 233
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKE-------EWKLE 267
+ SAT P + ++M +P + + + L G+KQ++ V E K++
Sbjct: 234 MLALSATYPESLAQQLSRYMREPTFVRLNPTDPGLLGLKQYYKIVPSHSLPHKVFEEKVQ 293
Query: 268 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
+L +L+ + Q+++F N + L D + S+ G + Q+ R M + +
Sbjct: 294 SLLELFSKIPFNQALVFSNLHTRAQHLADILSSKGLPAVCISGGLSQDQRLEAMWKLKQY 353
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
RVLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG GVA+ + +E
Sbjct: 354 QCRVLISTDLTSRGIDAEKVNLVINLDVPQDWETYMHRIGRAGRFGTLGVAVTYCCHGEE 413
Query: 388 --RMLFDIQK 395
+M+ QK
Sbjct: 414 ENKMMAIAQK 423
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 128/367 (34%), Positives = 206/367 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F +GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 100 QLDYGLVE----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+L G + +AL+L PTRELA Q+ + + G G+K A GG + ++ L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV V+V TPGR+ D+ ++++ + I + VLDEAD ML GF + I I LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT+ + E+ + + P I + ++ + I Q+ + V+K+ K L L
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q++IF+ T+ L ++ R A H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
+ ARGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
Query: 396 FYNVVIE 402
+IE
Sbjct: 361 RLGHLIE 367
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 128/367 (34%), Positives = 206/367 (56%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F +GL + L++ + G++KP+ IQ + I +G D+I AQ+GTGKTA+F IL+
Sbjct: 2 SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILE 61
Query: 100 QLDYGLVE----CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+L G + +AL+L PTRELA Q+ + + G G+K A GG + ++ L
Sbjct: 62 KLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV V+V TPGR+ D+ ++++ + I + VLDEAD ML GF + I I LP ++Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSAT+ + E+ + + P I + ++ + I Q+ + V+K+ K L L
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDT-KSALLSHLINE 240
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
Q++IF+ T+ L ++ R A H Q R ++ +F+SG + L+ T
Sbjct: 241 QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT 300
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
+ ARGID+ Q+S V+NYDLP + Y+HRIGR+GR G AI+FV++D+ + L I+
Sbjct: 301 GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES 360
Query: 396 FYNVVIE 402
+IE
Sbjct: 361 RLGHLIE 367
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 122/361 (33%), Positives = 200/361 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F A+ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 100 ------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Q D+ +ALVL PTRELA Q+++ ++V GG S+ Q +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 154 LSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
++G+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +P +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q +FSAT+ ++ + P RI V + T I+Q ++ + K E + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ Q +IF T++ VD LT ++ + HGD+ Q R+ +++EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L ++
Sbjct: 301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360
Query: 394 Q 394
+
Sbjct: 361 E 361
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 122/361 (33%), Positives = 200/361 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F A+ L L+ + G+++P+ IQ I DV+ AQ+GTGKTA F ILQ
Sbjct: 2 SFSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQ 61
Query: 100 ------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Q D+ +ALVL PTRELA Q+++ ++V GG S+ Q +
Sbjct: 62 LLMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAV 121
Query: 154 LSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
++G+ V++ TPGR+ D LR+ +L + + V DEAD ML GF D+I + + +P +
Sbjct: 122 FNAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQR 181
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLY 273
Q +FSAT+ ++ + P RI V + T I+Q ++ + K E + L
Sbjct: 182 QTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDR-KTEFVSHLV 240
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ Q +IF T++ VD LT ++ + HGD+ Q R+ +++EF+ G +VL+
Sbjct: 241 RSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQVLV 300
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+D+ ++ VIN++LP E+Y+HRIGR+GR G G+AI +++D +L ++
Sbjct: 301 ATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALLLEEV 360
Query: 394 Q 394
+
Sbjct: 361 E 361
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 140/378 (37%), Positives = 207/378 (54%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 98
TFD G + +L+ + GF KP+ IQ +G G D+I A +G+GKT ++C I+
Sbjct: 128 TFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIV 187
Query: 99 Q-----QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ-R 152
QL YG LVLAPTRELA QI+ G ++ + CV G + + Q R
Sbjct: 188 HINAQPQLQYGDGPI-VLVLAPTRELAVQIQTECSKFGKSSRIR-NTCVYGGAPKGPQIR 245
Query: 153 ILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
L+ GV + + TPGR+ DML + VLDEAD ML GF+ QI I + P
Sbjct: 246 DLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 305
Query: 213 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG-IKQFHVNVEKEEWKLETLCD 271
Q ++SAT P E ++TR ++N P+++ + EL I Q V V E K + L
Sbjct: 306 RQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQL-VEVIDEFSKRDRLVK 364
Query: 272 LYETLAITQS----VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 327
E+ A+ + ++F +T+R D +T +RS A HGD +QN RD ++ EFR G
Sbjct: 365 HLES-ALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKG 423
Query: 328 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+ +++ TD+ ARGIDV+ ++ VINYD+P E+Y+HRIGR+GR G G AI+F T +
Sbjct: 424 KTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNS 483
Query: 388 RMLFDIQKFYNVVIEELP 405
++ D+ K + +P
Sbjct: 484 KLGGDLCKIMREANQTVP 501
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 130/367 (35%), Positives = 202/367 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 101 LDYG----LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
L G + +AL+L PTRELA QI+ + G +L +K GG + + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
G ++V TPGR+ D+ + +++ D + I VLDEAD ML GF I+ I +LLP K Q
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FHVNVEKEEWKLETLCDLYE 274
+FSAT E E+ + +N PV I V T ++Q + +V+K K + L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK---KPDMLVKLVK 239
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Q ++F+ T+ + L + + T +A HG+ Q R + +F++G R+L+
Sbjct: 240 EGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + LF I+
Sbjct: 300 TDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIE 359
Query: 395 KFYNVVI 401
+ ++
Sbjct: 360 RLTQALL 366
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 130/367 (35%), Positives = 202/367 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++GL +L+ I G+ PS IQ + I G DV+ AQ+GTGKTA F IL+
Sbjct: 3 FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62
Query: 101 LDYG----LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
L G + +AL+L PTRELA QI+ + G +L +K GG + + +
Sbjct: 63 LAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCK 122
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
G ++V TPGR+ D+ + +++ D + I VLDEAD ML GF I+ I +LLP K Q
Sbjct: 123 GADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNL 182
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ--FHVNVEKEEWKLETLCDLYE 274
+FSAT E E+ + +N PV I V T ++Q + +V+K K + L L +
Sbjct: 183 LFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKK---KPDMLVKLVK 239
Query: 275 TLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 334
Q ++F+ T+ + L + + T +A HG+ Q R + +F++G R+L+
Sbjct: 240 EGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
Query: 335 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 394
TD+ ARGID+ Q+ V+N++LP E+Y+HRIGR+GR G G AI+ V+ + LF I+
Sbjct: 300 TDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFAIE 359
Query: 395 KFYNVVI 401
+ ++
Sbjct: 360 RLTQALL 366
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 129/370 (34%), Positives = 200/370 (54%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E+ TF +GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 96 GILQ-------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 148
++Q Q + E +ALVL PTRELAQQ+ ++A +K+ A GGTS++
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
L GV +++ TPGR+ D +SL + + VLDEAD ML GF + + +
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
L P Q FSAT + + + M P+ + V T E ++Q V+K+ K E
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L + Q ++F TR+ D L ++++ + +GD Q R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
R LI TD+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D++
Sbjct: 302 VRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQP 361
Query: 389 MLFDIQKFYN 398
L I++ N
Sbjct: 362 QLEAIERLLN 371
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 129/370 (34%), Positives = 200/370 (54%)
Query: 36 EVYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
E+ TF +GL LL + G P+ IQQ+ I +G DV+ AQ+GTGKTA F
Sbjct: 3 ELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGL 62
Query: 96 GILQ-------QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVR 148
++Q Q + E +ALVL PTRELAQQ+ ++A +K+ A GGTS++
Sbjct: 63 PLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMK 122
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
L GV +++ TPGR+ D +SL + + VLDEAD ML GF + + +
Sbjct: 123 VQLNHLRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRR 182
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
L P Q FSAT + + + M P+ + V T E ++Q V+K+ K E
Sbjct: 183 LSPLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKR-KREL 241
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L + Q ++F TR+ D L ++++ + +GD Q R + +F++G
Sbjct: 242 LSYLIGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGK 301
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
R LI TD+ ARG+D+ Q+ V+NYD+P + E+Y+HRIGR+GR G G+A++ ++ D++
Sbjct: 302 VRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQP 361
Query: 389 MLFDIQKFYN 398
L I++ N
Sbjct: 362 QLEAIERLLN 371
>RGD|735141 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0031100 "organ regeneration" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
PROSITE:PS51194 RGD:735141 GO:GO:0005524 GO:GO:0031100
GO:GO:0003743 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOVERGEN:HBG107989 HSSP:P10081 IPI:IPI00369618 UniGene:Rn.91523
EMBL:AF410810 ProteinModelPortal:Q812C4 IntAct:Q812C4 STRING:Q812C4
PRIDE:Q812C4 UCSC:RGD:735141 InParanoid:Q812C4 ArrayExpress:Q812C4
Genevestigator:Q812C4 Uniprot:Q812C4
Length = 138
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 104/138 (75%), Positives = 121/138 (87%)
Query: 185 FVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKR 244
FVLDEADEMLSRGFKDQIYDIFQ L QV + SATMP + LE+T+KFM P+RILVK+
Sbjct: 1 FVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKK 60
Query: 245 DELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+ELTLEGI+QF++NVE+EEWKL+TLCDLYETL ITQ+VIF+NTRRKVDWLT+KM +RD T
Sbjct: 61 EELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFT 120
Query: 305 VSATHGDMDQNTRDIIMR 322
VSA HGDMDQ RD+IMR
Sbjct: 121 VSAMHGDMDQKERDVIMR 138
>UNIPROTKB|F1P5C0 [details] [associations]
symbol:DDX20 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006917
"induction of apoptosis" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0017053 GO:GO:0006917 GO:GO:0003676
GO:GO:0000122 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 OMA:VEDYEHY
GeneTree:ENSGT00530000062880 EMBL:AADN02044991 IPI:IPI00582962
Ensembl:ENSGALT00000040229 Uniprot:F1P5C0
Length = 753
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 134/378 (35%), Positives = 211/378 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
F ++ L +L G+ A GF +PS +Q + I P + GLD+I QA+SGTGKT F + L
Sbjct: 7 FGSLLLSPPVLAGLEAAGFHRPSPVQLKAI-PLGRCGLDLIVQAKSGTGKTCVFSTIALD 65
Query: 100 QLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGV 158
L Q L+LAPTRE+A QI V+ +G + G++ H +GGT + +D+ L
Sbjct: 66 ALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDKVRLKK-C 124
Query: 159 HVVVGTP--GRVFDMLRRQSLRPDNIRIFVLDEADEMLSRG-FKDQIYDIFQLLPPKIQV 215
H+ VG+P GR+ ++ L +IR+F+LDEAD++L G F++QI I+ LP Q+
Sbjct: 125 HIAVGSPDVGRIKQLIELDYLNTASIRLFILDEADKLLEEGSFQEQINWIYSSLPANKQM 184
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKE-------EWKLET 268
SAT P +M +P + + + +L G+KQ++ V E K +
Sbjct: 185 LAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYKIVNSHPLPHKTFEEKTQH 244
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L +L+ + Q+++F N + L + + SR G M+Q+ R M + +
Sbjct: 245 LQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISGSMNQSQRLDAMAKLKQFH 304
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDE 387
RVLI+TDL +RGID ++V+LVIN D+P E Y+HRIGR+GRFG G+++ + R ++E
Sbjct: 305 CRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAGRFGTLGLSVTYCCRGEEE 364
Query: 388 RMLFDIQKFYNVVIEELP 405
M+ I + N+ + LP
Sbjct: 365 NMMMKIAQKCNLQLLPLP 382
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 132/386 (34%), Positives = 210/386 (54%)
Query: 39 DTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 98
+TFD G + +L + A GFEKP+AIQ +G G DV+ A++G+GKT ++C +
Sbjct: 140 ETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAI 199
Query: 99 QQLDYGLVECQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQR 152
++ + L+LAPTRELA QI+ + G ++ + CV GG R
Sbjct: 200 VHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIR-NTCVYGGVPKGPQIR 258
Query: 153 ILSSGVHVVVGTPGRVFDMLR--RQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLP 210
LS GV V + TPGR+ DML R +LR + VLDEAD ML GF+ QI I +
Sbjct: 259 DLSRGVEVCIATPGRLIDMLEAGRTNLR--RVTYLVLDEADRMLDMGFEPQIRKIISQIR 316
Query: 211 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT----LEGIKQFHVNVEKEEWKL 266
P Q ++SAT P E ++ F+N +++ + +L+ + I + EK + +
Sbjct: 317 PDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRMI 376
Query: 267 ETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRS 326
+ L + E + ++F T+R D +T +R + HGD Q RD ++ EF++
Sbjct: 377 KHLEKIMENRG-NKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT 435
Query: 327 GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
G S +++ TD+ +RGIDV+ ++ VINYD P E+Y+HRIGR+GR G KG AI F T D+
Sbjct: 436 GKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDN 495
Query: 387 ERMLFDIQKFYNVVIEELPANVADLL 412
+ D+ + +++ +A+++
Sbjct: 496 AKQARDLVTILSEAKQQIDPRLAEMV 521
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 134/379 (35%), Positives = 207/379 (54%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F +G+ L + G+ P+ +Q I G DV+ A +G+GKTA F +LQ
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 100 QLDY--------GLVECQALVLAPTRELAQQI-EKVMRALGDYLG-VKVHACVGGTSVRE 149
+L G+V C LVL PTRELAQQ+ + + + G +K+ A GG SV
Sbjct: 70 RLSEAKSADKSAGVVRC--LVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 150 DQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLL 209
+ L +G V+V TPGR+ D+L +L+ + FVLDEAD MLS GF +++ + L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 210 PPKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVEKEEWKLET 268
P + Q +FSAT P E +T K +++P+ L E T+E Q + V +E+ K
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTAL 243
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L + +Q++IFV+ + + L K+ R + HGD Q R ++ F++G
Sbjct: 244 LAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGE 303
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
VLI TD+ ARGID+ ++ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++
Sbjct: 304 ISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYH 363
Query: 389 MLFDIQKFYNV--VIEELP 405
I+K + V E++P
Sbjct: 364 HFGVIEKKNKIKLVREQIP 382
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 134/379 (35%), Positives = 207/379 (54%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F +G+ L + G+ P+ +Q I G DV+ A +G+GKTA F +LQ
Sbjct: 10 SFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQ 69
Query: 100 QLDY--------GLVECQALVLAPTRELAQQI-EKVMRALGDYLG-VKVHACVGGTSVRE 149
+L G+V C LVL PTRELAQQ+ + + + G +K+ A GG SV
Sbjct: 70 RLSEAKSADKSAGVVRC--LVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 150 DQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLL 209
+ L +G V+V TPGR+ D+L +L+ + FVLDEAD MLS GF +++ + L
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 210 PPKIQVGVFSATMPPEALEITRKFMNKPVRI-LVKRDELTLEGIKQFHVNVEKEEWKLET 268
P + Q +FSAT P E +T K +++P+ L E T+E Q + V +E+ K
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQESTIE---QRVITVNREQ-KTAL 243
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L + +Q++IFV+ + + L K+ R + HGD Q R ++ F++G
Sbjct: 244 LAHLIKQHQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKNGE 303
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
VLI TD+ ARGID+ ++ +VIN+DLP P +Y+HRIGRSGR G G+A+ ++ ++
Sbjct: 304 ISVLIATDIAARGIDIDKLPVVINFDLPRSPADYMHRIGRSGRAGEAGLAVTLISHEEYH 363
Query: 389 MLFDIQKFYNV--VIEELP 405
I+K + V E++P
Sbjct: 364 HFGVIEKKNKIKLVREQIP 382
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 129/372 (34%), Positives = 212/372 (56%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
FD +GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 100 QLDYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
QL + +ALV+ PTRELA Q+ ++ +L +K A GG ++ ++ +
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV ++V TPGR+FD++ + +L ++ V+DEAD ML GF I + +L+ P Q
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT +++ K +N+P + V + T ++Q V+K K E L +L
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRN 239
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q ++F +T+ + L ++ + HGD Q R+ ++ +F++G RVL+ TD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+ ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ D+ ML +I+
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA- 358
Query: 397 YNVVIEELPANV 408
++ E+LP V
Sbjct: 359 --LIGEKLPVTV 368
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 129/372 (34%), Positives = 212/372 (56%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQ 99
FD +GL LL I G+++ + +QQ+ ++P G D++ AQ+GTGKTA F +L+
Sbjct: 3 FDTLGLSSPLLNAITECGYQQLTQVQQQ-VIPLALVGKDIMACAQTGTGKTAAFALPVLE 61
Query: 100 QLDYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
QL + +ALV+ PTRELA Q+ ++ +L +K A GG ++ ++ +
Sbjct: 62 QLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQRKGVEQ 121
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV ++V TPGR+FD++ + +L ++ V+DEAD ML GF I + +L+ P Q
Sbjct: 122 GVDILVATPGRLFDIIGQFNLDLSSVTTLVIDEADRMLDLGFVRDIEKVKRLIAPVHQTM 181
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT +++ K +N+P + V + T ++Q V+K K E L +L
Sbjct: 182 LFSATYSDAVKQLSHKMLNQPQWVNVA-ENTTASTVEQLVYRVDKRR-KAELLSELVGRN 239
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q ++F +T+ + L ++ + HGD Q R+ ++ +F++G RVL+ TD
Sbjct: 240 NWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVLVATD 299
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+ ARG+D+Q + LVIN +LP E+Y+HRIGR+GR G G AI+FV+ D+ ML +I+
Sbjct: 300 VAARGLDIQALPLVINLELPFLAEDYVHRIGRTGRAGLSGRAISFVSPADDEMLAEIEA- 358
Query: 397 YNVVIEELPANV 408
++ E+LP V
Sbjct: 359 --LIGEKLPVTV 368
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 453 (164.5 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 100/298 (33%), Positives = 157/298 (52%)
Query: 109 QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRV 168
+AL+L PTRELA Q+ ++ YL +K GG + ++L G+ V+V TPGR+
Sbjct: 93 RALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQGLDVLVATPGRL 152
Query: 169 FDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALE 228
+ L +++ ++ VLDEAD ML GF I + + K Q +FSAT
Sbjct: 153 LEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTLMFSATFSDRVKS 212
Query: 229 ITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTR 288
+ + + P I V ++ T IKQ V EE K E L +L Q ++F T+
Sbjct: 213 LANQLLKSPKTISVSKENTTSGKIKQA-VYWVTEERKRELLSELIGVNNWQQVLVFAGTK 271
Query: 289 RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS 348
+ L +++ + HGD Q R+ + +F G RVL+ TD+ ARG+D+ ++
Sbjct: 272 ESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATDVAARGLDIPDLA 331
Query: 349 LVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPA 406
V+N+ LP PE+Y+HR+GR+GR G+ G AI+ V+ DER L +I++ E + A
Sbjct: 332 FVVNFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDERFLENIEQLIERKFERIVA 389
Score = 116 (45.9 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 42 DAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL 101
D++GL +LL+ + A G++ + IQQ I +G+D++ AQ+GTGKTA F IL +
Sbjct: 4 DSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAI 63
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 127/371 (34%), Positives = 201/371 (54%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L+ LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
LD Q LVL PTRELA Q+ + +R L + VKV GG + L G H
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D L R L N+ + VLDEAD ML GF+ Q+ I + P + Q +FS
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLA 277
AT P + I ++ M PV + V ++ T+E Q ++ ++ +++ L L
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEHK 239
Query: 278 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 337
+V+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD+
Sbjct: 240 PESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDV 299
Query: 338 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 397
ARG+D+ + V NY + E ++HRIGR+GR G KG A F D + ++++
Sbjct: 300 AARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYL 359
Query: 398 N--VVIEELPA 406
+ + E LP+
Sbjct: 360 DREITSESLPS 370
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 127/371 (34%), Positives = 201/371 (54%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + L+ LL + + G+ + + IQ + + G DVI Q ++G+GKTA F G+L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
LD Q LVL PTRELA Q+ + +R L + VKV GG + L G H
Sbjct: 63 LDVKRFRIQTLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQIGSLEHGAH 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ D L R L N+ + VLDEAD ML GF+ Q+ I + P + Q +FS
Sbjct: 123 IIVGTPGRIVDHLDRNRLDLSNLNMLVLDEADRMLEMGFQPQLDAIIEQSPRERQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLA 277
AT P + I ++ M PV + V ++ T+E Q ++ ++ +++ L L
Sbjct: 183 ATFPEQIQSIAKQIMYNPVMVKAAVTHEKNTIE---QHFYQLDDDKSRMQALQLLLLEHK 239
Query: 278 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 337
+V+F NT+R+ + D++ +V A HGD++Q RD + +F + S+ VL+ TD+
Sbjct: 240 PESAVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDV 299
Query: 338 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFY 397
ARG+D+ + V NY + E ++HRIGR+GR G KG A F D + ++++
Sbjct: 300 AARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQDGYKIALLEEYL 359
Query: 398 N--VVIEELPA 406
+ + E LP+
Sbjct: 360 DREITSESLPS 370
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 135/358 (37%), Positives = 198/358 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGIL 98
TFD G + +L + A GF+KP+ IQ +G G D++ A +G+GKT ++C GI+
Sbjct: 114 TFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIV 173
Query: 99 QQLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRI 153
L+ LVLAPTRELA QI+ G ++ + CV GG + R
Sbjct: 174 HINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIR-NTCVYGGVPKSQQIRD 232
Query: 154 LSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKI 213
LS G +V+ TPGR+ DML + VLDEAD ML GF+ QI I + P
Sbjct: 233 LSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 292
Query: 214 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVEKEEWKLETLCDL 272
Q ++SAT P E ++ ++N P+++ V EL+ I Q V V + K + L
Sbjct: 293 QTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQI-VEVVSDFEKRDRLNKY 351
Query: 273 YETLAIT---QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 329
ET + +++IF +T+R D +T +R A HGD DQ RD +++EFR+G S
Sbjct: 352 LETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRS 411
Query: 330 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 387
+++ TD+ ARGIDV+ ++ VINYD+P E+Y+HRIGR+GR G G AI+F T ++
Sbjct: 412 PIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNK 469
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 558 (201.5 bits), Expect = 4.5e-53, P = 4.5e-53
Identities = 135/382 (35%), Positives = 206/382 (53%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
T+ G+ +L + +G+EKP+ IQ + I G D+I A++G+GKT F + +
Sbjct: 372 TWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFR 431
Query: 100 QL--DYGLVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 154
+ L E + A+++ PTRELA QI K + LG++V GGT + E L
Sbjct: 432 HIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAEL 491
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIR---IFVLDEADEMLSRGFKDQIYDIFQLLPP 211
G ++V TPGR+ DML + R N+R VLDEAD M GF+ Q+ I + P
Sbjct: 492 KRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRP 551
Query: 212 KIQVGVFSATMPPEALE-ITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLC 270
Q +FSAT P A+E + R+ ++KP+ + V + ++Q HV V +EE K L
Sbjct: 552 DRQTVMFSATFP-RAMEALARRILSKPIEVQVGGRSVVCSDVEQ-HVIVIEEENKFLKLL 609
Query: 271 DLYETLAITQSVI-FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 329
+L SVI FV+ + D L + + + HG +DQ RD I+ +F++G+
Sbjct: 610 ELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTC 669
Query: 330 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 389
++L+ T + ARG+DV+Q+ LV+NY P E+Y+HR GR+GR G KG A F+T D R
Sbjct: 670 KLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQARY 729
Query: 390 LFDIQKFYNVVIEELPANVADL 411
DI K + +PA++ L
Sbjct: 730 AGDIIKALELSGNPIPADLEKL 751
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 130/367 (35%), Positives = 201/367 (54%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F ++GL E L+R I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL+
Sbjct: 2 SFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 100 QL------D----YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVR 148
+L D +G + + LVL PTRELA Q+ + + L V AC+ GG +
Sbjct: 62 RLFPNGVPDKSQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKF-VSACIFGGVGMN 120
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
+ +S GV V+V PGR+ D+ + S+ ++ I VLDEAD ML GF + +
Sbjct: 121 PQVQAMSRGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
LP K Q +FSAT + + K ++ P RI V T+E I+Q + K
Sbjct: 181 LPAKRQNLLFSATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANH-KRSL 239
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L A Q ++F T+ + L + + A HG+ QN R + +F++G
Sbjct: 240 LAHLITVGAWEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGD 299
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
R+++ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+E+
Sbjct: 300 VRIMVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359
Query: 389 MLFDIQK 395
+L I++
Sbjct: 360 LLKSIER 366
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
Identities = 132/373 (35%), Positives = 207/373 (55%)
Query: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-D 102
+G+ +++ + + G EK IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 109 LGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 168
Query: 103 YGLVECQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILSS 156
Y + LVLAPTRELA+Q+EK R L C+ GGT + + R L
Sbjct: 169 YNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRQLDY 225
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV V VGTPGRV D+++R +L ++ VLDEAD+ML GF + + I + LP K Q
Sbjct: 226 GVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEKRQSM 285
Query: 217 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFHVNVEKEEWKLETLCDLY- 273
+FSATMP +T+K++N P+ + LV D+ +GI + + + + + L
Sbjct: 286 MFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSI-IADSYGRASIIGPLVT 344
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
E + ++F T+R D L+ + +R A HGD+ Q+ R+ + FR G +L+
Sbjct: 345 EHAKGGKCIVFTQTKRDADRLSYAL-ARSFKCEALHGDISQSQRERTLAGFRDGHFNILV 403
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+DV V L+I+Y+LP E ++HR GR+GR G+KG AI ++D R + I
Sbjct: 404 ATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKII 463
Query: 394 QKFYNVVIEELPA 406
++ ELP+
Sbjct: 464 EREVGSRFTELPS 476
>UNIPROTKB|Q5STU3 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107334 EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 UniGene:Hs.254042
UniGene:Hs.730849 HGNC:HGNC:13917 EMBL:CR942185 IPI:IPI00790636
SMR:Q5STU3 STRING:Q5STU3 Ensembl:ENST00000376177
Ensembl:ENST00000400293 Ensembl:ENST00000430703
Ensembl:ENST00000438578 Ensembl:ENST00000446341
Ensembl:ENST00000450987 Ensembl:ENST00000453488 Uniprot:Q5STU3
Length = 425
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 131/361 (36%), Positives = 198/361 (54%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMR 128
I G+DV+ QA+SG GKTA F LQQL+ + LV+ TRELA QI K
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYE 134
Query: 129 ALGDYL-GVKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFV 186
Y+ VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+
Sbjct: 135 RFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFI 194
Query: 187 LDEADEMLSR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD 245
LDE D+ML + + + +IF++ P + QV +FSAT+ E + RKFM P+ I V +
Sbjct: 195 LDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDE 254
Query: 246 -ELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHT 304
+LTL G++Q++V ++ E K L DL + L Q VIFV + ++ L + ++
Sbjct: 255 TKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFP 313
Query: 305 VSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLH 364
A H M Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLH
Sbjct: 314 AIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLH 373
Query: 365 R 365
R
Sbjct: 374 R 374
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 122/366 (33%), Positives = 202/366 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F +GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 101 L-DYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
D + ++++L PTRELA Q+E+ + YL + A GG ++ L
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV ++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNL 182
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT+ + + + + + I + R I Q+ V+K+ K L L +
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKEN 241
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q++IF+ T+ L ++ R A H Q R+ ++ +F++G L+ T
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+++RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I++
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERR 361
Query: 397 YNVVIE 402
+IE
Sbjct: 362 LGHIIE 367
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
Identities = 122/366 (33%), Positives = 202/366 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F +GL L++ + G++ P+ IQ + I G +V+ AQ+GTGKTA+F +L +
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
Query: 101 L-DYGLVE---CQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSS 156
D + ++++L PTRELA Q+E+ + YL + A GG ++ L
Sbjct: 63 FADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLIE 122
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
GV ++V TPGR+ DM ++++R D + + VLDEAD ML GF + I +I + LP + Q
Sbjct: 123 GVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQNL 182
Query: 217 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETL 276
+FSAT+ + + + + + I + R I Q+ V+K+ K L L +
Sbjct: 183 LFSATLSKQVKALAKTAIPDAIEIEISRKNAASTQIDQWLTTVDKDR-KSALLSHLIKEN 241
Query: 277 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 336
Q++IF+ T+ L ++ R A H Q R+ ++ +F++G L+ T
Sbjct: 242 NWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPFLVATG 301
Query: 337 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKF 396
+++RGID+ + VINYDLP + ++Y+HRIGR+GR G +G AI+FV++DD R L I++
Sbjct: 302 VVSRGIDIDALERVINYDLPDEADDYIHRIGRTGRAGNQGEAISFVSKDDFRNLCAIERR 361
Query: 397 YNVVIE 402
+IE
Sbjct: 362 LGHIIE 367
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 131/412 (31%), Positives = 213/412 (51%)
Query: 4 LAEGSQFDARQFDARMNDLLGSDGQDFFTSYDEVYD--TFDAMGLQENLLRGIYAYGFEK 61
L E S + + + + + + + Q ++ Y+ TF+++G+ ++ GF K
Sbjct: 82 LDEDSLLEKEEEEKEIEEFINNTNQKKSEEEEKKYENVTFESLGVHPQIIDACNKLGFNK 141
Query: 62 PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQ 121
P IQ+ I KG D+I AQ+G+GKTA F +LQ+L L LAPTRELA
Sbjct: 142 PKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVLQKLLEAPQGLFCLALAPTRELAY 201
Query: 122 QIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRR-QSLRPD 180
QI A+G +GVK VGG L+ HVVVG+PGRV L +
Sbjct: 202 QIADQFNAIGSTIGVKTCVLVGGIDSMSQSLALAKKPHVVVGSPGRVLHHLEHTKGFNLR 261
Query: 181 NIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI 240
+I+ F++DEAD + S F++++ +I +++P + +FSATM + ++ R + PV++
Sbjct: 262 SIKYFIMDEADRLFSADFEEEVNNILKVIPKERNTYLFSATMTSKVAKLQRASLVNPVKV 321
Query: 241 LVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRS 300
V T++ + Q ++ V + +K L + LA ++IF +T + +R+
Sbjct: 322 QVASKYQTVDTLLQQYLFVPFK-YKDCYLAYILNELAGNLTIIFTSTCASSTKIAMMLRN 380
Query: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPE 360
+GDMDQ R + +F+ G+ +L+ TD+ ARG+D+ V LVINYD+PT +
Sbjct: 381 LGFGAIPINGDMDQGKRLASLNKFKQGTKSILVATDVAARGLDIPSVDLVINYDVPTNSK 440
Query: 361 NYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPANVADLL 412
Y+HR+GR+ R G G AI VT+ D M I+ ++ P +L
Sbjct: 441 EYVHRVGRTARAGNSGRAITIVTQYDVEMYQRIEFVLKKKLDSFPCQEETVL 492
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 125/364 (34%), Positives = 191/364 (52%)
Query: 37 VYDTFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 96
+ F ++GL +L + G+ P+ IQ++ I +G D++ AQ+GTGKT F +
Sbjct: 5 IMSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAP 64
Query: 97 ILQQLDYGLVEC-----QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 151
IL +L + LVLAPTRELA QI G L ++V GG +
Sbjct: 65 ILDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQI 124
Query: 152 RILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPP 211
R L G H++V TPGR+ D++ ++++ D + +LDEAD+ML GF + I + +P
Sbjct: 125 RQLERGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPS 184
Query: 212 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCD 271
K Q FSATMP + F+ P + V T I+Q VE+ E K L +
Sbjct: 185 KRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGRIEQRVCFVEQPE-KASLLIE 243
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
+ +++F T+ D + ++ D A HG+ Q+ R+ + F++G +
Sbjct: 244 KIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPI 303
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
L+ TD+ ARGI V ++ VINYDLP PE ++HRIGR+ R G GVAI+F +RD+ L
Sbjct: 304 LVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFCSRDERPTLR 363
Query: 392 DIQK 395
I+K
Sbjct: 364 AIEK 367
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 133/373 (35%), Positives = 208/373 (55%)
Query: 44 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 101
+G+ +++ + G EK IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 121 LGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKIIK 180
Query: 102 ---DYGLVEC-QALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRILSS 156
+G + Q LVLAPTRELA+Q+EK R L C+ GGT + + R L+
Sbjct: 181 FNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDT---ICLYGGTPIGQQMRELNY 237
Query: 157 GVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
G+ V VGTPGR+ D+++R +L ++ VLDEAD+ML GF + + I Q LP K Q
Sbjct: 238 GIDVAVGTPGRIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSM 297
Query: 217 VFSATMPPEALEITRKFMNKPVRI-LV-KRDELTLEGIKQFHVNVEKEEWKLETLCDLYE 274
+FSATMP +T+K++N P+ I LV D+ +GI + + + + + L +
Sbjct: 298 MFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYG-RASIIGPLVK 356
Query: 275 TLAIT-QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ ++F T+R D L + ++ + A HGD+ Q R+ + FR G+ +L+
Sbjct: 357 EHGKGGKCIVFTQTKRDADRLAFGL-AKSYKCEALHGDISQAQRERTLAGFRDGNFSILV 415
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+DV V LVI+Y+LP E ++HR GR+GR G+KG AI +D R + I
Sbjct: 416 ATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMI 475
Query: 394 QKFYNVVIEELPA 406
+K ELP+
Sbjct: 476 EKEVGSRFNELPS 488
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 122/369 (33%), Positives = 204/369 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++ L+++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L +
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLNK 71
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
L+ Q++V+ PTRELA Q+ K +R L + +K+ GGT L G H
Sbjct: 72 LEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAH 131
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
V+VGTPGR+ + + + +L+ DN+ + VLDEAD ML GF+ + +I P Q +FS
Sbjct: 132 VIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFS 191
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + I+ M PV + + E I Q V ++ +L+ L L +
Sbjct: 192 ATFPDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQVE 250
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+ IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+ A
Sbjct: 251 STAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAA 310
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ +
Sbjct: 311 RGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEA 370
Query: 400 VI--EELPA 406
VI E LP+
Sbjct: 371 VITPEPLPS 379
>UNIPROTKB|Q4K4K3 [details] [associations]
symbol:dbpA "ATP-independent RNA helicase DbpA"
species:220664 "Pseudomonas protegens Pf-5" [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 OMA:THEKSTI RefSeq:YP_262830.1
ProteinModelPortal:Q4K4K3 STRING:Q4K4K3 GeneID:3480144
KEGG:pfl:PFL_5772 PATRIC:19881049
BioCyc:PFLU220664:GIX8-5812-MONOMER Uniprot:Q4K4K3
Length = 461
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 121/345 (35%), Positives = 192/345 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F+ + L +L + + G+ + + IQ + + KG+D+I QA++G+GKTA F G+L
Sbjct: 8 FNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGIGLLNP 67
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
++ CQALV+ PTRELA Q+ K +R L +KV GG S L G H
Sbjct: 68 INPRYFGCQALVICPTRELADQVAKEVRRLARAEDNIKVLTLCGGVSFGPQIASLEHGAH 127
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
++VGTPGR+ LR+ SL D + VLDEAD ML GF D I DI + P + Q +FS
Sbjct: 128 IIVGTPGRIQQHLRKGSLVLDGLNTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFS 187
Query: 220 ATMPPEALEITRKFMNKPVRILVK--RDELTLEGIKQFHVNVEKEEWKLETLCDLYETLA 277
AT P ++ KFM P + + D+ +E ++F+ + EE ++ + +
Sbjct: 188 ATYPVGIKQLASKFMRDPQTVKAEAFHDDTQIE--QRFY-EISPEE-RMSAVTKVLHHFR 243
Query: 278 ITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDL 337
V F T+++V D + ++ + HGD++Q RD ++ F + S+ VL+ TD+
Sbjct: 244 PASCVAFCFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVATDV 303
Query: 338 LARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 382
ARG+D+ + +VIN +L E ++HR+GR+GR G KG+A++ V
Sbjct: 304 AARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLV 348
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 122/369 (33%), Positives = 204/369 (55%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F ++ L+++L++ + + G+E+ + IQ + + KG DVI +A++G+GKTA F +L +
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGLALLNK 71
Query: 101 LDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVH 159
L+ Q++V+ PTRELA Q+ K +R L + +K+ GGT L G H
Sbjct: 72 LEVKKFRIQSMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQIGSLEHGAH 131
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
V+VGTPGR+ + + + +L+ DN+ + VLDEAD ML GF+ + +I P Q +FS
Sbjct: 132 VIVGTPGRLEEHVIKGTLQLDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFS 191
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYETLAIT 279
AT P + I+ M PV + + E I Q V ++ +L+ L L +
Sbjct: 192 ATFPDQIKSISESIMTDPVMVKIASSE-DQSTISQKFFKVGNDDDRLDALRLLLLGNQVE 250
Query: 280 QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLA 339
+ IF NT+++ + D + +V A HGD++Q RD + F + S+ +L+ TD+ A
Sbjct: 251 STAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVATDVAA 310
Query: 340 RGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNV 399
RG+D+ + LVINY + E ++HRIGR+GR G G+A + + + + ++ +
Sbjct: 311 RGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFSDKESYKVGLLEDYLEA 370
Query: 400 VI--EELPA 406
VI E LP+
Sbjct: 371 VITPEPLPS 379
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 121/366 (33%), Positives = 195/366 (53%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F A L E+++ + G+++P+ IQ+ I G D++ AQ+GTGKTA F I+ +
Sbjct: 4 FKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINK 63
Query: 101 LDYGLVECQA-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
++ +A L+L PTRELA QI + + D LG+K GG + +
Sbjct: 64 FGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIE 123
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
G+ ++V TPGR+ D++ + + +FVLDEAD ML GF + I LP Q
Sbjct: 124 LGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQT 183
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLETLCDLYET 275
+FSATMP E + + P +I + + +T++ + Q +++K K+ L ++
Sbjct: 184 LLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHLDKSN-KVPLLFNILTK 242
Query: 276 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 335
+ +IF T+ D + + T ++ H Q R+ ++ F+ + RVL+ T
Sbjct: 243 ADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVAT 302
Query: 336 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
D+ ARGIDV ++LVINY+LP P NY+HRIGR+ R G+ G+AI+F +D R L +I+
Sbjct: 303 DVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAVENDIRQLTNIEN 362
Query: 396 FYNVVI 401
VI
Sbjct: 363 SIGQVI 368
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 130/364 (35%), Positives = 188/364 (51%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F + G + GI A G+E P+ IQ + I G DV+ AQ+GTGKTA F IL +
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALPILHR 62
Query: 101 LDYG-LVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
L G +ALV+APTRELA+QI LG ++ GG V + L +G
Sbjct: 63 LQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQKLKAGAE 122
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFS 219
VVV PGR+ D + + ++ + + VLDEAD+M GF I + + LPP+ Q +FS
Sbjct: 123 VVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRRQTLLFS 182
Query: 220 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEW-KLETLCDLYETLAI 278
ATMP + + + + PV + V + H E+ K L +L
Sbjct: 183 ATMPIDIRTLAQDILVDPVTVQVGT---VAPAVTVAHALYPVEQHLKTPLLLELLRHTDT 239
Query: 279 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 338
+IF T+ + L +++ + ++ G++ QN R + FR G+ ++L+ TD+
Sbjct: 240 ESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQILVATDIA 299
Query: 339 ARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYN 398
ARGIDV QVS VINYD+P E Y+HRIGR+GR R G A VT DD M+ I++
Sbjct: 300 ARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDGAMVRAIERSLG 359
Query: 399 VVIE 402
IE
Sbjct: 360 APIE 363
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 134/379 (35%), Positives = 196/379 (51%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 100
F +N+L I GF +P+ IQ +G KG D+I A++G+GKT + L
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226
Query: 101 LD----YGLVECQ-ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILS 155
+ G + L+LAPTRELA QI++ R G GV+ GG R L
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286
Query: 156 SGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQV 215
GV +V+ TPGR+ DML Q + VLDEAD ML GF+ QI I + P Q
Sbjct: 287 RGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQT 346
Query: 216 GVFSATMPPEALEITRKFMNKPVRILVKRDELTL-EGIKQFHVNVEKEEWKLETLCDLYE 274
++SAT P E + R+F+ P + ++ +L + I Q V E K L L +
Sbjct: 347 LLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPE-KYNRLLTLLK 405
Query: 275 TLAITQSV-IFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
L + IFV T+R D +T ++R A HGD Q+ RD ++ EF+SG S ++
Sbjct: 406 QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMT 465
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 393
TD+ ARG+DV+ + V+NYD P E+Y+HRIGR+GR G KG+A F T D+ + ++
Sbjct: 466 ATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAREL 525
Query: 394 QKFYNVVIEELPANVADLL 412
K + +P ++ L+
Sbjct: 526 VKILQEAGQVVPPTLSALV 544
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 550 (198.7 bits), Expect = 2.3e-52, P = 2.3e-52
Identities = 133/365 (36%), Positives = 202/365 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F+ L +++ + GF KP+AIQ +G G D++ AQ+G+GKT + +
Sbjct: 238 SFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIV 297
Query: 100 QLDYG--LVECQ---ALVLAPTRELAQQIEKVMRALGDYLGVKV-HACV-GGTSVREDQR 152
+ ++ + ALVLAPTRELAQQI+ V+R G ++ H C+ GG+S R
Sbjct: 298 HIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQAR 357
Query: 153 ILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
L GV V++ TPGR+ D L ++ VLDEAD ML GF+ QI I + + P
Sbjct: 358 DLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 417
Query: 213 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVEKEEWKLETL-C 270
QV ++SAT P E + F+N ++I + L+ I+Q V + E K + L C
Sbjct: 418 RQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQI-VEICTEIEKPQRLVC 476
Query: 271 DLYETLAITQS-------VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 323
L E I S ++FV T+ KV+ + +R+ + ++ HGD QN RD ++++
Sbjct: 477 LLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKD 536
Query: 324 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 383
FR+G S +LI TD+ +RG+DV+ + VINYD P ENY+HRIGR+GR + G A F T
Sbjct: 537 FRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTFFT 596
Query: 384 RDDER 388
D+ +
Sbjct: 597 PDNAK 601
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 424 (154.3 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 104/294 (35%), Positives = 153/294 (52%)
Query: 109 QALVLAPTRELAQQIEKVMRALGDYL--G------------VKVHACVGGTSVREDQRIL 154
+ALV+ PTREL Q+ + G YL G + V + GG L
Sbjct: 86 RALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRPYEPQIEAL 145
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
+G VVVGTPGR+ D+ ++ L+ + + VLDEADEML GF I I + +P Q
Sbjct: 146 RAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILRQIPADRQ 205
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTL--EGIKQFHVNVEKEEWKLETLCDL 272
+FSATMP + + R FM +P I + + + +QF + K+E + +
Sbjct: 206 SMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQFVYRAHALD-KVELVSRV 264
Query: 273 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
+ ++IF T+R + D++ R V A HGD+ Q R+ ++ FR+G VL
Sbjct: 265 LQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKAFRTGGIDVL 324
Query: 333 ITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDD 386
+ TD+ ARGID+ V+ VINY P + Y+HRIGR+GR GR GVA+ V D+
Sbjct: 325 VATDVAARGIDIDDVTHVINYQCPEDEKMYVHRIGRTGRAGRTGVAVTLVDWDE 378
Score = 136 (52.9 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 36/101 (35%), Positives = 56/101 (55%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
TF +G+++ ++R + G ++P AIQ+ + G DVI QA++G GKT F +LQ
Sbjct: 11 TFAKLGVRDEIVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQ 70
Query: 100 QLDYG-----LVEC-QALVLAPTRELAQQIEKVMRALGDYL 134
++ G L +ALV+ PTREL Q+ + G YL
Sbjct: 71 RITSGDGTRPLTGAPRALVVVPTRELCLQVTDDLATAGKYL 111
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 551 (199.0 bits), Expect = 2.4e-52, P = 2.4e-52
Identities = 131/380 (34%), Positives = 205/380 (53%)
Query: 45 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-DY 103
GL + I + G+EKP++IQ + I G DVI A++G+GKT F + + + D
Sbjct: 424 GLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQ 483
Query: 104 GLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVH 159
++ A+++ PTRELA QI + + L ++ GG +++ L G
Sbjct: 484 RPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKDQIADLKRGAE 543
Query: 160 VVVGTPGRVFDMLRRQSLRPDNIR---IFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 216
+VV TPGR+ D+L + R N+ VLDEAD M GF+ Q+ I + P Q
Sbjct: 544 IVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRIINNIRPDRQTV 603
Query: 217 VFSATMPPEALE-ITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWK----LETLCD 271
+FSAT P A+E + RK + KPV I V + ++Q V V EE K LE L +
Sbjct: 604 LFSATFP-RAMEALARKVLKKPVEITVGGRSVVASEVEQI-VEVRPEESKFSRLLELLGE 661
Query: 272 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 331
LY ++++FV+ + D L + R +T ++ HG DQ+ RD + ++++G V
Sbjct: 662 LYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDV 721
Query: 332 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 391
LI T ++ARG+DV+ + LV+NYD P E+Y+HR+GR+GR G GVA+ F+T + E+
Sbjct: 722 LIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAV 781
Query: 392 DIQKFYNVVIEELPANVADL 411
DI K + + +P + L
Sbjct: 782 DIAKALKMSKQPVPKELQTL 801
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 129/367 (35%), Positives = 201/367 (54%)
Query: 40 TFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 99
+F ++GL E L+ I A G+ +P+ +QQR I +G D++ AQ+GTGKT F IL+
Sbjct: 2 SFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILE 61
Query: 100 QL------D----YGLVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVR 148
+L D +G + + LVL PTRELA Q+ + L V AC+ GG +
Sbjct: 62 RLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKF-VSACIFGGVGMN 120
Query: 149 EDQRILSSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQL 208
+ ++ GV V+V PGR+ D+ + S+ ++ I VLDEAD ML GF + +
Sbjct: 121 PQVQAMARGVDVLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLAR 180
Query: 209 LPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFHVNVEKEEWKLET 268
LP K Q +FSAT + ++ K ++ P RI V T+E I+Q + K
Sbjct: 181 LPAKRQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASH-KRAL 239
Query: 269 LCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 328
L L A Q ++F T+ + L + + + A HG+ QN R + +F++G
Sbjct: 240 LAHLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGE 299
Query: 329 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 388
R+L+ TD+ ARG+D+ Q+ V+N++LP E+Y+HRIGR+GR GR G AI+ V D+E+
Sbjct: 300 VRILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEK 359
Query: 389 MLFDIQK 395
+L I++
Sbjct: 360 LLKSIER 366
>UNIPROTKB|H0Y7G4 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HGNC:HGNC:13917 ChiTaRS:DDX39B EMBL:CT009531
Ensembl:ENST00000420337 Ensembl:ENST00000426766
Ensembl:ENST00000448800 Uniprot:H0Y7G4
Length = 328
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 119/316 (37%), Positives = 186/316 (58%)
Query: 98 LQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSS 156
LQQL+ + LV+ TRELA QI K Y+ VKV GG S+++D+ +L
Sbjct: 4 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKK 63
Query: 157 GV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSR-GFKDQIYDIFQLLPPKIQ 214
H+VVGTPGR+ + R +SL +I+ F+LDE D+ML + + + +IF++ P + Q
Sbjct: 64 NCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQ 123
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFHVNVEKEEWKLETLCDLY 273
V +FSAT+ E + RKFM P+ I V + +LTL G++Q++V ++ E K L DL
Sbjct: 124 VMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLL 182
Query: 274 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 333
+ L Q VIFV + ++ L + ++ A H M Q R ++F+ R+L+
Sbjct: 183 DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILV 242
Query: 334 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-RDDERMLFD 392
T+L RG+D+++V++ NYD+P + YLHR+ R+GRFG KG+AI FV+ +D ++L D
Sbjct: 243 ATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILND 302
Query: 393 IQKFYNVVIEELPANV 408
+Q + V I ELP +
Sbjct: 303 VQDRFEVNISELPDEI 318
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 542 (195.9 bits), Expect = 6.8e-52, P = 6.8e-52
Identities = 132/363 (36%), Positives = 195/363 (53%)
Query: 41 FDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SGILQ 99
F+ G + ++ I GF KP+AIQ +G G D++ AQ+G+GKT + ++
Sbjct: 159 FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVVH 218
Query: 100 QLDYGLVECQ----ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 154
+ +E ALVLAPTRELAQQI++V G V+ + C+ GG + R L
Sbjct: 219 INNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVR-NTCIFGGAPKGQQARDL 277
Query: 155 SSGVHVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 214
GV +V+ TPGR+ D L R + VLDEAD ML GF+ QI I Q + P Q
Sbjct: 278 ERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDRQ 337
Query: 215 VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLE-GIKQFHVNVEKEEWKLETLCDLY 273
V ++SAT P E ++ +F+N +++ + L+ I Q V+V E KL L L
Sbjct: 338 VLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQI-VDVCDENEKLMKLIKLL 396
Query: 274 ETLAI---TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSR 330
++ T+++IFV T+++VD +T + + A HGD Q RD ++ FR+G
Sbjct: 397 TDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHS 456
Query: 331 VLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERML 390
+L+ TD+ ARG+DV V VINYD P+ E+Y+HRIGR+GR G A T +
Sbjct: 457 ILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKA 516
Query: 391 FDI 393
D+
Sbjct: 517 NDL 519
>UNIPROTKB|F8VQ10 [details] [associations]
symbol:DDX39B "Spliceosome RNA helicase DDX39B"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AL662847 EMBL:AL662801 EMBL:CR753892 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:NAENPAI EMBL:BX001040 EMBL:BX248516
EMBL:BX927320 EMBL:CR753820 EMBL:CR753864 HGNC:HGNC:13917
ChiTaRS:DDX39B EMBL:CR942185 IPI:IPI01025218 SMR:F8VQ10
Ensembl:ENST00000417556 Ensembl:ENST00000547039
Ensembl:ENST00000547489 Ensembl:ENST00000548340
Ensembl:ENST00000548614 Ensembl:ENST00000550217
Ensembl:ENST00000552288 Uniprot:F8VQ10
Length = 443
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 122/337 (36%), Positives = 194/337 (57%)
Query: 77 LDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTRELAQQIEKVMRALGDYL-G 135
L +QQ + TG+ + +L + + V LV+ TRELA QI K Y+
Sbjct: 101 LATLQQLEPVTGQV--YLGRVLGR-GFWCVFVSVLVMCHTRELAFQISKEYERFSKYMPN 157
Query: 136 VKVHACVGGTSVREDQRILSSGV-HVVVGTPGRVFDMLRRQSLRPDNIRIFVLDEADEML 194
VKV GG S+++D+ +L H+VVGTPGR+ + R +SL +I+ F+LDE D+ML
Sbjct: 158 VKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKML 217
Query: 195 SR-GFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGI 252
+ + + +IF++ P + QV +FSAT+ E + RKFM P+ I V + +LTL G+
Sbjct: 218 EQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGL 277
Query: 253 KQFHVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDM 312
+Q++V ++ E K L DL + L Q VIFV + ++ L + ++ A H M
Sbjct: 278 QQYYVKLKDNE-KNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM 336
Query: 313 DQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRF 372
Q R ++F+ R+L+ T+L RG+D+++V++ NYD+P + YLHR+ R+GRF
Sbjct: 337 PQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRF 396
Query: 373 GRKGVAINFVT-RDDERMLFDIQKFYNVVIEELPANV 408
G KG+AI FV+ +D ++L D+Q + V I ELP +
Sbjct: 397 GTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 433
Score = 171 (65.3 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 60/170 (35%), Positives = 79/170 (46%)
Query: 16 DARMNDLLGSDG------QDFFTSYDEVYDT-FDAMGLQENLLRGIYAYGFEKPSAIQQR 68
D + G DG +D SY ++ + F L+ LLR I GFE PS +Q
Sbjct: 15 DDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHE 74
Query: 69 GIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD------Y-GLVE-----C---QALVL 113
I G+DV+ QA+SG GKTA F LQQL+ Y G V C LV+
Sbjct: 75 CIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVYLGRVLGRGFWCVFVSVLVM 134
Query: 114 APTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVREDQRILSSGVHVVV 162
TRELA QI K Y+ VKV GG S+++D+ +L +V
Sbjct: 135 CHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIV 184
WARNING: HSPs involving 697 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 412 412 0.00080 118 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 947
No. of states in DFA: 611 (65 KB)
Total size of DFA: 238 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.71u 0.12s 35.83t Elapsed: 00:00:02
Total cpu time: 35.76u 0.12s 35.88t Elapsed: 00:00:02
Start: Fri May 10 07:30:34 2013 End: Fri May 10 07:30:36 2013
WARNINGS ISSUED: 2