Query 015159
Match_columns 412
No_of_seqs 288 out of 2092
Neff 8.6
Searched_HMMs 46136
Date Fri Mar 29 03:40:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015159.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015159hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00817 tpt Tpt phosphate/ph 100.0 1.2E-39 2.6E-44 313.8 32.6 293 109-401 2-297 (302)
2 PTZ00343 triose or hexose phos 100.0 4.3E-39 9.4E-44 314.9 36.8 293 106-399 46-350 (350)
3 KOG1441 Glucose-6-phosphate/ph 100.0 3.4E-38 7.3E-43 297.7 13.1 294 106-405 14-315 (316)
4 PLN00411 nodulin MtN21 family 100.0 3.5E-28 7.5E-33 237.4 34.2 288 113-407 17-338 (358)
5 PF08449 UAA: UAA transporter 100.0 1.9E-28 4.2E-33 235.8 30.7 283 114-402 5-302 (303)
6 PRK11689 aromatic amino acid e 100.0 4.9E-26 1.1E-30 218.3 32.9 269 107-399 6-289 (295)
7 KOG1444 Nucleotide-sugar trans 100.0 1.3E-26 2.8E-31 214.3 25.6 291 112-406 15-309 (314)
8 PRK11272 putative DMT superfam 100.0 5.7E-25 1.2E-29 210.7 36.1 268 118-400 17-288 (292)
9 KOG1443 Predicted integral mem 99.9 3.3E-26 7.2E-31 208.5 19.0 289 107-397 14-315 (349)
10 PRK10532 threonine and homoser 99.9 1.9E-24 4.2E-29 207.1 31.9 268 107-401 14-285 (293)
11 PRK11453 O-acetylserine/cystei 99.9 3.2E-24 6.9E-29 206.2 32.8 275 108-400 7-290 (299)
12 KOG1581 UDP-galactose transpor 99.9 4E-25 8.7E-30 201.7 23.9 286 107-401 12-317 (327)
13 TIGR00950 2A78 Carboxylate/Ami 99.9 3.3E-24 7.1E-29 201.8 30.9 251 124-392 4-259 (260)
14 PRK15430 putative chlorampheni 99.9 1E-23 2.3E-28 202.3 33.7 275 107-402 10-290 (296)
15 PF06027 DUF914: Eukaryotic pr 99.9 9E-25 2E-29 209.2 26.1 270 125-402 29-310 (334)
16 KOG4510 Permease of the drug/m 99.9 5.3E-27 1.2E-31 209.5 1.1 278 106-399 36-327 (346)
17 KOG1580 UDP-galactose transpor 99.9 3.8E-24 8.2E-29 187.9 12.6 269 122-399 26-315 (337)
18 KOG1442 GDP-fucose transporter 99.9 1.6E-24 3.4E-29 194.4 7.0 291 113-408 32-338 (347)
19 TIGR03340 phn_DUF6 phosphonate 99.9 2.4E-21 5.2E-26 184.6 27.3 262 120-394 12-280 (281)
20 COG0697 RhaT Permeases of the 99.9 1E-18 2.3E-23 166.3 33.9 263 122-398 20-288 (292)
21 TIGR00688 rarD rarD protein. T 99.9 9.9E-19 2.1E-23 164.4 30.1 244 108-372 5-255 (256)
22 KOG1582 UDP-galactose transpor 99.9 3.8E-20 8.2E-25 166.0 18.8 285 106-399 40-334 (367)
23 COG5070 VRG4 Nucleotide-sugar 99.9 4.8E-20 1E-24 160.9 18.6 284 113-406 10-305 (309)
24 COG5006 rhtA Threonine/homoser 99.8 2.5E-17 5.4E-22 147.0 25.0 251 127-399 30-284 (292)
25 KOG3912 Predicted integral mem 99.8 1.6E-17 3.5E-22 149.9 21.1 274 123-399 17-336 (372)
26 KOG1583 UDP-N-acetylglucosamin 99.8 4E-19 8.6E-24 160.1 8.4 274 126-403 20-320 (330)
27 TIGR00776 RhaT RhaT L-rhamnose 99.8 6.1E-16 1.3E-20 147.8 26.8 262 109-397 5-288 (290)
28 COG2962 RarD Predicted permeas 99.7 3.6E-14 7.8E-19 130.2 31.8 280 106-405 8-291 (293)
29 PF04142 Nuc_sug_transp: Nucle 99.7 1.1E-15 2.3E-20 141.8 22.2 212 169-388 14-244 (244)
30 KOG2765 Predicted membrane pro 99.7 5.3E-17 1.1E-21 152.5 12.8 225 170-401 157-394 (416)
31 PF03151 TPT: Triose-phosphate 99.7 2.4E-16 5.2E-21 136.2 15.9 145 253-397 1-153 (153)
32 KOG2234 Predicted UDP-galactos 99.7 1E-13 2.2E-18 130.8 26.8 224 171-402 91-327 (345)
33 KOG2766 Predicted membrane pro 99.5 8.4E-15 1.8E-19 130.8 0.3 257 126-398 35-300 (336)
34 TIGR00803 nst UDP-galactose tr 99.3 1.9E-11 4E-16 112.4 11.9 189 196-395 2-222 (222)
35 PF00892 EamA: EamA-like trans 99.3 4.5E-11 9.7E-16 98.9 11.4 120 122-243 4-125 (126)
36 COG2510 Predicted membrane pro 99.2 7.4E-11 1.6E-15 95.0 10.3 122 122-244 16-139 (140)
37 KOG4314 Predicted carbohydrate 99.2 4E-11 8.8E-16 103.5 9.0 221 171-400 52-279 (290)
38 COG2510 Predicted membrane pro 99.2 1.1E-10 2.4E-15 94.0 10.0 134 253-395 4-137 (140)
39 PF00892 EamA: EamA-like trans 99.1 7.5E-10 1.6E-14 91.5 11.0 124 262-396 1-125 (126)
40 PF13536 EmrE: Multidrug resis 99.0 1.7E-09 3.6E-14 88.5 9.9 105 143-248 2-110 (113)
41 PF06800 Sugar_transport: Suga 99.0 2.4E-07 5.1E-12 86.1 22.5 210 169-394 42-268 (269)
42 PRK15430 putative chlorampheni 98.9 9.6E-08 2.1E-12 91.7 18.6 140 249-396 5-144 (296)
43 TIGR00688 rarD rarD protein. T 98.8 1.6E-07 3.4E-12 88.2 17.2 140 252-396 2-141 (256)
44 TIGR03340 phn_DUF6 phosphonate 98.7 3.6E-07 7.9E-12 87.0 15.7 132 254-397 3-135 (281)
45 TIGR00950 2A78 Carboxylate/Ami 98.7 8.3E-07 1.8E-11 83.3 17.7 118 122-240 141-260 (260)
46 PLN00411 nodulin MtN21 family 98.5 3.9E-06 8.4E-11 82.5 16.4 136 253-397 14-156 (358)
47 PRK10532 threonine and homoser 98.5 6.6E-06 1.4E-10 78.9 17.6 120 122-244 161-281 (293)
48 PRK15051 4-amino-4-deoxy-L-ara 98.4 8.9E-06 1.9E-10 66.1 13.9 65 180-244 45-109 (111)
49 PF05653 Mg_trans_NIPA: Magnes 98.4 6.7E-07 1.5E-11 85.6 8.5 215 180-400 58-295 (300)
50 PRK11272 putative DMT superfam 98.4 1.2E-05 2.6E-10 77.0 17.0 123 122-246 163-287 (292)
51 PRK11689 aromatic amino acid e 98.4 8.9E-06 1.9E-10 78.1 16.0 118 122-244 169-287 (295)
52 PRK02971 4-amino-4-deoxy-L-ara 98.4 7.3E-06 1.6E-10 68.3 12.6 121 252-400 2-125 (129)
53 COG2962 RarD Predicted permeas 98.3 3.2E-05 7E-10 71.8 16.5 140 250-398 5-145 (293)
54 PTZ00343 triose or hexose phos 98.3 3E-05 6.4E-10 76.3 17.0 136 250-396 47-185 (350)
55 PRK13499 rhamnose-proton sympo 98.3 0.001 2.2E-08 64.6 26.4 229 167-398 68-342 (345)
56 PRK11453 O-acetylserine/cystei 98.3 4.9E-05 1.1E-09 73.1 17.4 124 122-245 156-288 (299)
57 PF03151 TPT: Triose-phosphate 98.2 0.00011 2.4E-09 63.0 15.6 125 119-243 10-152 (153)
58 TIGR00817 tpt Tpt phosphate/ph 98.1 9.6E-05 2.1E-09 71.1 15.5 122 263-395 13-135 (302)
59 PF13536 EmrE: Multidrug resis 98.0 0.00031 6.7E-09 57.2 13.6 72 328-400 37-109 (113)
60 COG0697 RhaT Permeases of the 97.9 0.0012 2.6E-08 62.4 17.8 119 123-245 168-288 (292)
61 PRK15051 4-amino-4-deoxy-L-ara 97.8 0.001 2.3E-08 53.9 14.1 58 339-396 51-108 (111)
62 TIGR00776 RhaT RhaT L-rhamnose 97.8 0.00025 5.4E-09 67.9 12.1 132 253-399 2-138 (290)
63 PRK02971 4-amino-4-deoxy-L-ara 97.8 0.0002 4.4E-09 59.6 9.7 72 175-246 51-124 (129)
64 PRK10452 multidrug efflux syst 97.7 0.00059 1.3E-08 55.9 10.5 71 175-245 33-104 (120)
65 PRK10650 multidrug efflux syst 97.6 0.0015 3.3E-08 52.5 11.7 69 175-243 38-107 (109)
66 PF08449 UAA: UAA transporter 97.6 0.0022 4.7E-08 61.8 15.1 136 110-245 155-298 (303)
67 PRK09541 emrE multidrug efflux 97.6 0.0012 2.7E-08 53.3 11.1 70 176-245 34-104 (110)
68 KOG2922 Uncharacterized conser 97.5 0.00015 3.2E-09 68.2 5.5 214 179-400 71-309 (335)
69 COG2076 EmrE Membrane transpor 97.5 0.0012 2.7E-08 52.3 9.5 71 175-245 33-104 (106)
70 PRK11431 multidrug efflux syst 97.5 0.0021 4.5E-08 51.5 11.0 70 175-244 32-102 (105)
71 COG5006 rhtA Threonine/homoser 97.5 0.0048 1E-07 56.3 14.3 121 120-242 159-280 (292)
72 COG4975 GlcU Putative glucose 97.3 3.7E-05 8E-10 69.4 -0.6 239 137-397 27-285 (288)
73 PF06027 DUF914: Eukaryotic pr 97.3 0.0072 1.6E-07 58.6 14.5 71 329-399 83-153 (334)
74 PRK13499 rhamnose-proton sympo 97.2 0.01 2.2E-07 57.7 14.8 140 251-400 6-156 (345)
75 PF06800 Sugar_transport: Suga 97.2 0.0067 1.4E-07 56.7 12.6 101 137-240 163-267 (269)
76 PF04657 DUF606: Protein of un 97.2 0.015 3.2E-07 49.1 13.5 130 254-394 3-138 (138)
77 PRK10452 multidrug efflux syst 97.1 0.0049 1.1E-07 50.5 9.9 57 343-399 48-105 (120)
78 PRK10650 multidrug efflux syst 97.0 0.028 6.2E-07 45.2 13.1 54 343-396 53-107 (109)
79 PF04657 DUF606: Protein of un 96.9 0.035 7.6E-07 46.8 13.7 118 124-241 16-138 (138)
80 PF04142 Nuc_sug_transp: Nucle 96.9 0.0025 5.5E-08 59.3 7.1 76 326-401 18-93 (244)
81 PRK09541 emrE multidrug efflux 96.8 0.017 3.8E-07 46.6 9.9 57 343-399 48-105 (110)
82 PF00893 Multi_Drug_Res: Small 96.6 0.021 4.5E-07 44.7 8.9 60 176-235 33-93 (93)
83 KOG1581 UDP-galactose transpor 96.5 0.077 1.7E-06 49.9 13.3 134 109-242 172-311 (327)
84 TIGR00803 nst UDP-galactose tr 96.4 0.04 8.8E-07 50.4 11.3 67 175-241 155-221 (222)
85 PF07857 DUF1632: CEO family ( 96.4 0.0034 7.4E-08 58.3 4.0 132 253-402 1-139 (254)
86 PRK11431 multidrug efflux syst 96.4 0.044 9.5E-07 43.9 9.8 55 343-397 47-102 (105)
87 KOG4510 Permease of the drug/m 96.3 0.0046 9.9E-08 56.8 4.4 77 166-242 247-323 (346)
88 COG2076 EmrE Membrane transpor 96.2 0.037 8E-07 44.0 8.5 55 344-398 49-104 (106)
89 PF05653 Mg_trans_NIPA: Magnes 96.1 0.066 1.4E-06 51.4 11.1 117 250-396 5-121 (300)
90 KOG1441 Glucose-6-phosphate/ph 95.7 0.044 9.4E-07 52.7 8.1 137 107-244 161-307 (316)
91 COG3238 Uncharacterized protei 95.6 0.43 9.3E-06 40.6 12.9 138 251-398 4-147 (150)
92 KOG2234 Predicted UDP-galactos 95.6 0.86 1.9E-05 44.0 16.4 117 277-396 44-163 (345)
93 COG3238 Uncharacterized protei 95.6 0.6 1.3E-05 39.7 13.6 121 122-243 18-145 (150)
94 PF10639 UPF0546: Uncharacteri 95.5 0.033 7.1E-07 45.0 5.5 69 173-242 43-112 (113)
95 PF00893 Multi_Drug_Res: Small 95.3 0.26 5.6E-06 38.5 9.9 48 341-388 45-93 (93)
96 PF06379 RhaT: L-rhamnose-prot 95.2 0.91 2E-05 43.8 14.9 145 251-403 6-159 (344)
97 PF10639 UPF0546: Uncharacteri 93.3 0.49 1.1E-05 38.3 7.6 52 343-394 59-111 (113)
98 KOG2765 Predicted membrane pro 91.4 0.13 2.9E-06 49.7 2.4 75 326-400 160-234 (416)
99 KOG1580 UDP-galactose transpor 90.7 0.41 9E-06 43.5 4.7 72 171-242 240-311 (337)
100 KOG4314 Predicted carbohydrate 89.1 0.19 4.2E-06 44.3 1.3 62 338-399 66-127 (290)
101 COG4975 GlcU Putative glucose 87.9 0.13 2.9E-06 46.9 -0.4 135 253-403 3-142 (288)
102 PF04342 DUF486: Protein of un 84.1 9 0.00019 30.4 8.0 29 366-394 77-105 (108)
103 COG3169 Uncharacterized protei 83.8 19 0.0004 28.2 9.6 39 357-395 71-113 (116)
104 KOG1582 UDP-galactose transpor 81.9 8.4 0.00018 36.0 8.2 121 127-247 208-335 (367)
105 COG5070 VRG4 Nucleotide-sugar 81.5 35 0.00075 31.2 11.7 105 138-242 185-294 (309)
106 KOG2922 Uncharacterized conser 78.0 1.6 3.5E-05 41.6 2.4 119 249-397 18-136 (335)
107 KOG3912 Predicted integral mem 72.4 9.4 0.0002 35.9 5.8 55 341-395 102-156 (372)
108 KOG1444 Nucleotide-sugar trans 66.7 1.3E+02 0.0027 29.1 13.2 131 253-396 13-148 (314)
109 PRK02237 hypothetical protein; 66.3 11 0.00024 30.1 4.2 39 207-245 68-106 (109)
110 PRK02237 hypothetical protein; 64.9 12 0.00026 29.9 4.2 45 354-398 62-106 (109)
111 PF02694 UPF0060: Uncharacteri 64.2 11 0.00023 30.0 3.8 39 207-245 66-104 (107)
112 KOG1583 UDP-N-acetylglucosamin 62.5 54 0.0012 31.0 8.5 45 200-244 270-314 (330)
113 PF07168 Ureide_permease: Urei 61.0 4.4 9.6E-05 38.5 1.3 140 258-399 2-148 (336)
114 PF06379 RhaT: L-rhamnose-prot 60.4 1.7E+02 0.0037 28.5 27.4 226 168-396 69-339 (344)
115 PF02694 UPF0060: Uncharacteri 59.7 13 0.00028 29.6 3.5 45 354-398 60-104 (107)
116 KOG2766 Predicted membrane pro 54.7 3 6.5E-05 38.6 -0.8 64 332-395 85-148 (336)
117 PF04342 DUF486: Protein of un 54.7 1.1E+02 0.0024 24.4 9.2 52 191-242 54-106 (108)
118 PF11044 TMEMspv1-c74-12: Plec 54.1 27 0.00058 22.9 3.6 11 390-400 21-31 (49)
119 KOG4831 Unnamed protein [Funct 52.5 24 0.00053 28.0 3.9 68 174-242 55-123 (125)
120 PF05977 MFS_3: Transmembrane 51.7 3E+02 0.0065 28.7 16.0 26 347-372 342-367 (524)
121 COG1742 Uncharacterized conser 48.0 20 0.00042 28.4 2.8 37 209-245 69-105 (109)
122 KOG1443 Predicted integral mem 46.6 2.8E+02 0.006 26.8 13.0 50 193-242 264-313 (349)
123 TIGR02865 spore_II_E stage II 45.1 4.6E+02 0.0099 28.8 16.6 44 200-243 12-55 (764)
124 PF06946 Phage_holin_5: Phage 42.6 1.6E+02 0.0035 22.9 7.3 63 344-406 23-89 (93)
125 PF07857 DUF1632: CEO family ( 42.0 3E+02 0.0064 25.8 12.4 102 137-244 26-134 (254)
126 PF05297 Herpes_LMP1: Herpesvi 41.9 8.6 0.00019 36.0 0.0 58 200-257 51-112 (381)
127 COG4858 Uncharacterized membra 41.6 2.5E+02 0.0055 24.9 10.0 54 221-274 156-216 (226)
128 PF07444 Ycf66_N: Ycf66 protei 38.0 49 0.0011 25.2 3.6 28 376-403 4-31 (84)
129 KOG1442 GDP-fucose transporter 37.0 64 0.0014 30.5 4.8 131 113-243 188-326 (347)
130 cd01324 cbb3_Oxidase_CcoQ Cyto 36.0 42 0.00091 22.6 2.6 26 383-408 17-42 (48)
131 COG3086 RseC Positive regulato 35.6 2E+02 0.0044 24.3 7.1 29 349-377 72-105 (150)
132 PRK10655 potE putrescine trans 35.2 4.7E+02 0.01 26.1 18.8 27 380-406 409-435 (438)
133 PF05884 ZYG-11_interact: Inte 33.5 4.4E+02 0.0094 25.2 18.3 56 174-233 169-224 (299)
134 TIGR00905 2A0302 transporter, 32.7 5.4E+02 0.012 26.1 17.0 23 380-402 417-439 (473)
135 TIGR03810 arg_ornith_anti argi 32.5 5.4E+02 0.012 26.1 16.3 22 380-401 412-433 (468)
136 PF08627 CRT-like: CRT-like; 30.5 1.3E+02 0.0028 24.8 5.0 40 106-145 54-94 (130)
137 COG0004 AmtB Ammonia permease 29.6 5.9E+02 0.013 25.6 15.4 93 203-298 235-331 (409)
138 PF04246 RseC_MucC: Positive r 28.9 1.8E+02 0.0039 24.0 6.1 20 353-372 69-88 (135)
139 PF06570 DUF1129: Protein of u 27.7 4.4E+02 0.0096 23.5 11.6 24 251-274 178-201 (206)
140 PF05545 FixQ: Cbb3-type cytoc 26.8 90 0.002 20.8 3.1 23 382-404 15-37 (49)
141 PRK10263 DNA translocase FtsK; 25.8 1.1E+03 0.023 27.8 12.8 12 229-240 25-36 (1355)
142 COG4147 DhlC Predicted symport 25.7 2.8E+02 0.006 28.6 7.5 58 343-400 440-509 (529)
143 PRK11902 ampG muropeptide tran 24.9 6.5E+02 0.014 24.5 18.0 27 378-404 369-395 (402)
144 PRK10666 ammonium transporter; 24.2 7.6E+02 0.017 25.0 19.5 78 219-298 273-354 (428)
145 PF14981 FAM165: FAM165 family 22.4 1.4E+02 0.003 19.9 3.1 18 385-402 20-37 (51)
146 PRK11357 frlA putative fructos 22.0 8.1E+02 0.017 24.5 13.1 21 383-403 419-439 (445)
147 PRK10862 SoxR reducing system 21.1 3.5E+02 0.0077 23.0 6.5 15 355-369 78-92 (154)
148 PRK02935 hypothetical protein; 21.0 3.9E+02 0.0084 21.3 5.9 23 378-400 41-63 (110)
149 KOG4812 Golgi-associated prote 20.7 3.1E+02 0.0067 25.4 6.1 19 377-395 219-237 (262)
150 COG1346 LrgB Putative effector 20.1 5.6E+02 0.012 23.5 7.7 24 115-138 8-31 (230)
No 1
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.2e-39 Score=313.81 Aligned_cols=293 Identities=61% Similarity=0.998 Sum_probs=249.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015159 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVT 188 (412)
Q Consensus 109 ~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 188 (412)
.+...+..||.+|.+.+++||++++++++|.+++++|+.++.+.+.+.+..+.+++.+.++++++.+++.|+++.+++.+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999887766654444555667889999999999999999999
Q ss_pred HHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHHHHH
Q 015159 189 SNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRS 268 (412)
Q Consensus 189 ~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~a~~~ 268 (412)
.|++++|++++++++++++.|+++++++++++|||++++++++++++++|+.+...+|.++++.|++++++++++|++++
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~~ 161 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRN 161 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877777788899999999999999999
Q ss_pred HHHHHhcC--CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHH-HHHHHHHHHHHH
Q 015159 269 IYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGM-FYHLYNQLATNT 345 (412)
Q Consensus 269 v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~~~~~~~~~~~~ 345 (412)
++.||..+ ++|+.+++.|+++++.+.++|+....|++.....++.+..........+...+..+. +...+|...+.+
T Consensus 162 v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (302)
T TIGR00817 162 IFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQQVAFML 241 (302)
T ss_pred HHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 899999999999999999999988777544322212111001111122332333333 555667788899
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 015159 346 LERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 346 l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
++++||.++++.++++|++++++|++++||++|+.+++|.+++++|+++|++.|.+
T Consensus 242 l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~ 297 (302)
T TIGR00817 242 LGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ 297 (302)
T ss_pred HccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999976543
No 2
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=4.3e-39 Score=314.95 Aligned_cols=293 Identities=37% Similarity=0.627 Sum_probs=253.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI--DSKLLKLLIPVAVCHA 183 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 183 (412)
..++...+++.||++|...++.||++++.+|+|++++++|++++.+++.+++..+.+++++. .++.++.+++.|+++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999999888776666554443434 3457889999999999
Q ss_pred HHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHH
Q 015159 184 LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNIS 263 (412)
Q Consensus 184 ~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~ 263 (412)
..+...+.|+++++++++++++++.|+++++++++++|||++++++++++++++|+.+++.+|.++++.|++++++|+++
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~~~ 205 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSNLG 205 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999999999999999999999999999999999988889999999999999999
Q ss_pred HHHHHHHHHHhcCC-------CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhh---hHhhhchHHHHHHHHHHHH
Q 015159 264 FTYRSIYSKKAMTD-------MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSD---AISKVGMVKFISDLFWVGM 333 (412)
Q Consensus 264 ~a~~~v~~kk~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~ 333 (412)
+++++++.||.+++ +++.+...++.+++.++++|+....|++.... .+.+ .........++..++.+++
T Consensus 206 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~-~~~~~~~~~~~~~~~~~l~~i~~s~l 284 (350)
T PTZ00343 206 SSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVP-VWTNYTANMTNYTKGIIIFKIFFSGV 284 (350)
T ss_pred HHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHHhhhcccccchHHHHHHHHHHHH
Confidence 99999999998864 45667888889999999999988777543211 1110 0011122233445667799
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
+++++|...|.++++++|+++++.+++||++++++|+++|||++|+.+++|.+++++|+++|++.|
T Consensus 285 ~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k 350 (350)
T PTZ00343 285 WYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK 350 (350)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999763
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=297.72 Aligned_cols=294 Identities=38% Similarity=0.549 Sum_probs=261.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHh--hCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYN--YFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPI-DSKLLKLLIPVAVCH 182 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~--~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~ 182 (412)
+.+....++..||+++++.+++||++++ +|++|++++.+|+.++.+.+.+.+..+..+..+. ++..+..+++.++++
T Consensus 14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~ 93 (316)
T KOG1441|consen 14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF 93 (316)
T ss_pred hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence 4567788899999999999999999999 7999999999999999998888888877666654 556889999999999
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHH
Q 015159 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (412)
Q Consensus 183 ~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~l 262 (412)
.+++++.|.|+.+++++++|++|+++|++++++++++.+|+++...++++++++.||.+.+.+|.++|+.|++.++++.+
T Consensus 94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~ 173 (316)
T KOG1441|consen 94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL 173 (316)
T ss_pred HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcC----CCChhhHHHHHHHHHHHHHH-HHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHH
Q 015159 263 SFTYRSIYSKKAMT----DMDSTNIYAYISIIALFVCI-PPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHL 337 (412)
Q Consensus 263 ~~a~~~v~~kk~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ 337 (412)
..++++++.|+.++ ++|+++++.|+.+++.+.++ |+....|+... . .+.+ ...... ++..++ ..+++++
T Consensus 174 ~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~-~~~~--~~~~~~-~~~~~~-~sv~~f~ 247 (316)
T KOG1441|consen 174 AFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-V-GFLT--APWFVT-FLILLL-NSVLAFL 247 (316)
T ss_pred HHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-e-eeec--cccchh-hHHHHH-HHHHHHH
Confidence 99999999999883 48999999999999999999 88777776654 1 1111 111222 333333 3499999
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHHHH
Q 015159 338 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEE 405 (412)
Q Consensus 338 ~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~ 405 (412)
+|+..|.+++++||+|+++.+.+|+++.++.|+++|++++|+.+..|+++.+.|+.+|++.|.+++++
T Consensus 248 ~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 248 LNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999998776543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=3.5e-28 Score=237.36 Aligned_cols=288 Identities=12% Similarity=0.091 Sum_probs=221.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHh-CC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015159 113 FFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GL-PKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (412)
Q Consensus 113 ~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (412)
.++.--....+...+.|..++.--.|..+.++|+.++++++.++... ++ ++.++.+++.+..+.+.+++..+.+.+.+
T Consensus 17 ~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~~ 96 (358)
T PLN00411 17 AMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITGY 96 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455567778889998875558889999999998887755432 22 22233456777788888888766777899
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHH------hCcccChhhHHHHHHHHHHHHhhhcC-cc----------------
Q 015159 191 VSFAAVAVSFTHTIKALEPFFNAAASQFI------LGQQLPLTLWLSLAPVVIGVSMASLT-EL---------------- 247 (412)
Q Consensus 191 ~al~~~s~s~~~ii~~~~Pvf~~lls~~~------l~er~~~~~~l~l~l~~~Gv~l~~~~-~~---------------- 247 (412)
++++|++++.+.++.++.|++++++++++ ++||+++++++|++++++|+.++... +.
T Consensus 97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~ 176 (358)
T PLN00411 97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQL 176 (358)
T ss_pred HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccccccccccc
Confidence 99999999999999999999999999999 69999999999999999999976531 11
Q ss_pred -------ccc-HHHHHHHHHHHHHHHHHHHHHHHhcCCCChh-hHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhh
Q 015159 248 -------SFN-WTGFISAMISNISFTYRSIYSKKAMTDMDST-NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISK 318 (412)
Q Consensus 248 -------~~~-~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (412)
..+ ..|++++++++++|+++++++||..+++++. ...+++..++.+.+.++....+..+... |. ..
T Consensus 177 ~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~--~~---~~ 251 (358)
T PLN00411 177 SPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSV--WI---IH 251 (358)
T ss_pred ccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCccc--ce---ec
Confidence 112 4599999999999999999999998887664 5667788887777777666655322111 10 01
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 319 VGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 319 ~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
.+. . +..+++.+++..+...++++++++.+|.+.++..++.|+++++++++++||++++.+++|+++++.|+++.++.
T Consensus 252 ~~~-~-~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 252 FDI-T-LITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred cch-H-HHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 111 1 22244445544455567789999999999999999999999999999999999999999999999999999987
Q ss_pred HHhHHHHHh
Q 015159 399 KAQMEEEKR 407 (412)
Q Consensus 399 ~~~~~~~~~ 407 (412)
+++|.+.++
T Consensus 330 ~~~~~~~~~ 338 (358)
T PLN00411 330 KANEEKDQL 338 (358)
T ss_pred hhhhhhhcc
Confidence 766655443
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.97 E-value=1.9e-28 Score=235.76 Aligned_cols=283 Identities=17% Similarity=0.249 Sum_probs=232.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015159 114 FFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (412)
Q Consensus 114 ~~~w~~~~~~~~~~~K~~~~~--f~-~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (412)
+...++......++++++.+. .. +|.++++.|+++..+...+...... ..+.++..++.+++.++++.+++.+.|
T Consensus 5 ~~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (303)
T PF08449_consen 5 VAGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSN 82 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHH
Confidence 344445555666888888776 22 6999999999998887766554333 222344557778999999999999999
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc----cc------cHHHHHHHHHH
Q 015159 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL----SF------NWTGFISAMIS 260 (412)
Q Consensus 191 ~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~----~~------~~~G~~l~l~s 260 (412)
.|++|+|+++.+++|++.|+++++++.+++|||++++++++++++++|+++...+|. .. +..|+++.+++
T Consensus 83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s 162 (303)
T PF08449_consen 83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS 162 (303)
T ss_pred HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999877542 11 12499999999
Q ss_pred HHHHHHHHHHHHHhcC--CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHH
Q 015159 261 NISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLY 338 (412)
Q Consensus 261 ~l~~a~~~v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~ 338 (412)
.++++++.+++||..+ +.++.++++|.+.++++.+++.....+..+... .+. .....+..+..++..++++..+
T Consensus 163 l~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~-~~~---f~~~~p~~~~~l~~~s~~~~~g 238 (303)
T PF08449_consen 163 LLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRS-AIR---FISAHPSVLLYLLLFSLTGALG 238 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH-HHH---HHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 467889999999999999988777632111100 010 1223445677888889999999
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhH
Q 015159 339 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 339 ~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~ 402 (412)
+...+.++++.+|++.+++.++|+++++++|+++||+++++.+|+|.++++.|+.+|++.|+|+
T Consensus 239 ~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 239 QFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9888999999999999999999999999999999999999999999999999999999988764
No 6
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=4.9e-26 Score=218.27 Aligned_cols=269 Identities=12% Similarity=0.080 Sum_probs=200.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGH 186 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 186 (412)
.+.....+++| .......|...++++ |..+.++|+.++.+++.++. +.++.+ ++.++.++..++....++
T Consensus 6 ~l~~l~a~~~W----g~~~~~~k~~~~~~~-P~~~~~~R~~~a~l~l~~~~--~~~~~~---~~~~~~~~~~~l~~~~~~ 75 (295)
T PRK11689 6 TLIGLIAILLW----STMVGLIRGVSESLG-PVGGAAMIYSVSGLLLLLTV--GFPRLR---QFPKRYLLAGGLLFVSYE 75 (295)
T ss_pred hHHHHHHHHHH----HHHHHHHHHHHccCC-hHHHHHHHHHHHHHHHHHHc--cccccc---cccHHHHHHHhHHHHHHH
Confidence 44566677777 445577899999887 99999999999888766542 222211 222233444455555677
Q ss_pred HHHHhhhhc----cchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc-----------cccH
Q 015159 187 VTSNVSFAA----VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-----------SFNW 251 (412)
Q Consensus 187 ~~~~~al~~----~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-----------~~~~ 251 (412)
.+.+.++++ +++..+.++.++.|+++++++++++|||++++++++++++++|+.++..++. ..+.
T Consensus 76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 155 (295)
T PRK11689 76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNP 155 (295)
T ss_pred HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccCh
Confidence 777777754 6778889999999999999999999999999999999999999998875432 1245
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 252 ~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
.|+++++++++|||.++++.||..+++++..... ..+.+.+.+.....+.+.. .... ..|..+++.
T Consensus 156 ~G~~~~l~aa~~~A~~~v~~k~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~----------~~~~-~~~~~l~~~ 221 (295)
T PRK11689 156 LSYGLAFIGAFIWAAYCNVTRKYARGKNGITLFF---ILTALALWIKYFLSPQPAM----------VFSL-PAIIKLLLA 221 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCchhHHH---HHHHHHHHHHHHHhcCccc----------cCCH-HHHHHHHHH
Confidence 6999999999999999999999987888765422 2233333333332222111 0111 224444455
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
++...+.+.++++++++.++...++..+++|+++++++++++||++++.+++|+++++.|+.+....+
T Consensus 222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~ 289 (295)
T PRK11689 222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLAT 289 (295)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhH
Confidence 66566667788899999999999999999999999999999999999999999999999998876544
No 7
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.3e-26 Score=214.31 Aligned_cols=291 Identities=17% Similarity=0.240 Sum_probs=253.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCChHHHHH--HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 015159 112 FFFFMWYFLNVIFNILNKRIYNYFPYPYFVSV--IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTS 189 (412)
Q Consensus 112 ~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 189 (412)
...+.+..+++.+.+.||++++.++||..+.. .|.+.+.+.+.+....+.-+.++++++..|.++|..+++.+.....
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~~~i~t~ 94 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFVGMLFTG 94 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHHHHHHHc
Confidence 45566666778888999999999999965555 9999998888887777888888899999999999999999999999
Q ss_pred HhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHHHHHHHHH
Q 015159 190 NVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSI 269 (412)
Q Consensus 190 ~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~l~~a~~~v 269 (412)
..+++|++++.++++|...|+++++.+..++|.|++...|.++....+|.......|.+++..|+.|++.+.++.+.+.+
T Consensus 95 ~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~~a~~~v 174 (314)
T KOG1444|consen 95 SKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLTTAAFVV 174 (314)
T ss_pred cccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc--CCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015159 270 YSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLE 347 (412)
Q Consensus 270 ~~kk~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~ 347 (412)
+.||.. .+.+.+.+++|.++.+++.+....++.++++ ......+.+....++..+.++|+++++.++..+++..
T Consensus 175 ~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~----~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s~~ct~ 250 (314)
T KOG1444|consen 175 YVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD----ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTSFLCTR 250 (314)
T ss_pred HHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH----HHHhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999876 4577889999999999999998888887655 1111122334456778899999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 015159 348 RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (412)
Q Consensus 348 ~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~~ 406 (412)
..|+++.++++..+...+.+...+++|+++++..++|..+-+.|..+|++.+.++|+.+
T Consensus 251 ~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~~ 309 (314)
T KOG1444|consen 251 VNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQP 309 (314)
T ss_pred hccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccCC
Confidence 99999999999555555555666666788999999999999999999999987655443
No 8
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=5.7e-25 Score=210.67 Aligned_cols=268 Identities=15% Similarity=0.107 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhh-hc
Q 015159 118 YFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSF-AA 195 (412)
Q Consensus 118 ~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~al-~~ 195 (412)
.+.+.......|...++.+ |..++++|++++.+++.++...++.+ ..++++++.....|.+. ..++.+.+++. ++
T Consensus 17 ~~iWg~~~~~~K~~~~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 93 (292)
T PRK11272 17 YIIWGSTYLVIRIGVESWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNGMVTVAEHQN 93 (292)
T ss_pred HHHHhhHHHHHHHHhccCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444566678899888776 99999999999988876554433222 23566677777777765 46778888998 99
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC-cccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 015159 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-ELSFNWTGFISAMISNISFTYRSIYSKKA 274 (412)
Q Consensus 196 ~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~-~~~~~~~G~~l~l~s~l~~a~~~v~~kk~ 274 (412)
++++.+.++.++.|+++++++++ +|||++++++++++++++|+.++..+ +.+.+..|++++++++++||.+.++.||.
T Consensus 94 ~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a~~~~~~~~~ 172 (292)
T PRK11272 94 VPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWAFGSVWSSRL 172 (292)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999986 69999999999999999999988654 33456789999999999999999999997
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccchhH
Q 015159 275 MTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVAPLT 353 (412)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~l~~~sa~~ 353 (412)
.++ ++.....++..++.+.+.+.....+.+.... .....|..+++.++++. .....+++++++.++.+
T Consensus 173 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~ 241 (292)
T PRK11272 173 PLP-VGMMAGAAEMLAAGVVLLIASLLSGERLTAL----------PTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPAL 241 (292)
T ss_pred CCC-cchHHHHHHHHHHHHHHHHHHHHcCCccccc----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHH
Confidence 543 4556677888888888877665443221100 01122444455555443 44567778999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 354 ~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
.++..+++|+++++++++++||++++.+++|..+++.|+.+.+..++
T Consensus 242 ~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~ 288 (292)
T PRK11272 242 ATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999876544
No 9
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.94 E-value=3.3e-26 Score=208.49 Aligned_cols=289 Identities=19% Similarity=0.275 Sum_probs=244.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhC-C---CCCCCC-CHHHHHHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG-L---PKRAPI-DSKLLKLLIPVAVC 181 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~-~---~~~~~~-~~~~~~~~~~~~l~ 181 (412)
+...+.+++.||++|.+..+++|+...+|++|++++..|.++-.++........ . +++... .+++++++.|.++.
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala 93 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA 93 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence 445666779999999999999999999999999999999988777655433321 1 112233 34577888999999
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHH
Q 015159 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (412)
Q Consensus 182 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~ 261 (412)
.++...+.|++++|++++.+++.|++.++|+.+++.++.=||+++.-.+.+.++.+|+.+.++.+.++|..|+.+++++.
T Consensus 94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS 173 (349)
T KOG1443|consen 94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS 173 (349)
T ss_pred hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCC-----CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchH---HHHHHHHHHHH
Q 015159 262 ISFTYRSIYSKKAMTD-----MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMV---KFISDLFWVGM 333 (412)
Q Consensus 262 l~~a~~~v~~kk~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~g~ 333 (412)
++.+++..+.++++++ -+|...+.+..+...+.++|....+|++.....+ ..+...+.. .....+...|.
T Consensus 174 ~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s--~~f~~~d~~~~~rv~g~i~l~g~ 251 (349)
T KOG1443|consen 174 LLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSS--SIFRFQDTGLILRVIGLISLGGL 251 (349)
T ss_pred HhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhh--hHHHhcCccHHHHHHHHHHHHHH
Confidence 9999999998887743 5688999999999999999999999998764321 111222222 22334555678
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 334 FYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
.+++.-+.-|..+.+++.++.++.+..|.+.+.+++.++.+|.++..+|.|..+.+.|+.+|..
T Consensus 252 laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~ 315 (349)
T KOG1443|consen 252 LAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN 315 (349)
T ss_pred HHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence 8888888889999999999999999999999999999999999999999999999999999943
No 10
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=1.9e-24 Score=207.08 Aligned_cols=268 Identities=12% Similarity=0.073 Sum_probs=203.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGH 186 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 186 (412)
...+.+.++.| .......|+.+++++ |..+.++|++++.+++.++...++ .+.++++++..+..|++....+
T Consensus 14 ~~~~~la~~~~----~~~~~~~K~~~~~~~-~~~~~~~R~~~a~l~l~~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~ 85 (293)
T PRK10532 14 ILLLLIAMASI----QSGASLAKSLFPLVG-APGVTALRLALGTLILIAIFKPWR---LRFAKEQRLPLLFYGVSLGGMN 85 (293)
T ss_pred HHHHHHHHHHH----HhhHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhHHh---ccCCHHHHHHHHHHHHHHHHHH
Confidence 34444445555 344456799998887 999999999999887765543211 2345677777888888888888
Q ss_pred HHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC--c-ccccHHHHHHHHHHHHH
Q 015159 187 VTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT--E-LSFNWTGFISAMISNIS 263 (412)
Q Consensus 187 ~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~--~-~~~~~~G~~l~l~s~l~ 263 (412)
.+.+++++|++++.+.++..+.|+++++++ +|++.. +.++.++++|+.++... + .+.+..|++++++++++
T Consensus 86 ~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~aa~~ 159 (293)
T PRK10532 86 YLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGAGAC 159 (293)
T ss_pred HHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHHHHHHH
Confidence 899999999999999999999999999886 355544 45567789999876532 2 23467899999999999
Q ss_pred HHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHH-HHH
Q 015159 264 FTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN-QLA 342 (412)
Q Consensus 264 ~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~ 342 (412)
|+.+.++.||..++.++... .++..++.+++.|+....+. .. ..+ ...+..+++.|++..... ..+
T Consensus 160 ~a~~~v~~r~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~-~~----------~~~-~~~~~~~l~lgv~~t~~~~~l~ 226 (293)
T PRK10532 160 WAIYILSGQRAGAEHGPATV-AIGSLIAALIFVPIGALQAG-EA----------LWH-WSILPLGLAVAILSTALPYSLE 226 (293)
T ss_pred HHHHHHHHHHHhccCCchHH-HHHHHHHHHHHHHHHHHccC-cc----------cCC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999877887765 56667777777776554332 11 000 112333345555554443 466
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 015159 343 TNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 343 ~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
++.+++.++.+.++..+++|+++.+++++++||++++.+++|++++++|+..+....++
T Consensus 227 ~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~ 285 (293)
T PRK10532 227 MIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRR 285 (293)
T ss_pred HHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCC
Confidence 79999999999999999999999999999999999999999999999999999866544
No 11
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=3.2e-24 Score=206.17 Aligned_cols=275 Identities=15% Similarity=0.255 Sum_probs=200.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHH
Q 015159 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGH 186 (412)
Q Consensus 108 l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~ 186 (412)
+......++| .......|..+++++ |..+.++|+.++++.++++.. +++ .++ +..+..+++.. ...
T Consensus 7 l~~l~~~~~W----g~~~~~~k~~~~~~~-p~~~~~~R~~~a~~~l~~~~~--~~~---~~~---~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 7 VLALLVVVVW----GLNFVVIKVGLHNMP-PLMLAGLRFMLVAFPAIFFVA--RPK---VPL---NLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHH----hhhHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHhc--CCC---Cch---HHHHHHHHHHHHHHH
Confidence 4455666667 445567798888887 999999999987765544331 121 122 23444455433 444
Q ss_pred HHHHhhhhc-cchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc---ccccHHHHHHHHHHHH
Q 015159 187 VTSNVSFAA-VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNI 262 (412)
Q Consensus 187 ~~~~~al~~-~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~~l~l~s~l 262 (412)
.+.+.+++| .+++.+.++.++.|+++++++++++|||++++++++++++++|+.++..++ .+.++.|+++++++++
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~aal 153 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAAAF 153 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHHHH
Confidence 567788887 688999999999999999999999999999999999999999999887542 2335679999999999
Q ss_pred HHHHHHHHHHHhcCCCChh---hHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHH
Q 015159 263 SFTYRSIYSKKAMTDMDST---NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN 339 (412)
Q Consensus 263 ~~a~~~v~~kk~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 339 (412)
+|+.+.+++||..++.+.. ....++..++.+.+.......|++......+ ...+ ...|..+++.+++.....
T Consensus 154 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~l~~l~i~~t~~~ 228 (299)
T PRK11453 154 SWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSL----VTID-MTTILSLMYLAFVATIVG 228 (299)
T ss_pred HHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh----ccCC-HHHHHHHHHHHHHHHHHH
Confidence 9999999999976544332 3445555555544444444444332111000 0111 133556666666555544
Q ss_pred -HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 340 -QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 340 -~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
..+++.+++.++.+.++..+++|+++.+++++++||++++.+++|.+++++|+++..+.++
T Consensus 229 ~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 229 YGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 5667889999999999999999999999999999999999999999999999998876554
No 12
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4e-25 Score=201.70 Aligned_cols=286 Identities=15% Similarity=0.131 Sum_probs=241.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhh--------CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY--------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPV 178 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~--------f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (412)
.+.+++++...|...+.+.++++.+.+. |.+|.++.+.|-+++.++...+... .+.....++.+..+...
T Consensus 12 ~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~--~k~~~~~~apl~~y~~i 89 (327)
T KOG1581|consen 12 IILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKW--WKKELSGVAPLYKYSLI 89 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhc--ccccCCCCCchhHHhHH
Confidence 5567777777778888888999888774 7889999999999888876544322 22223344567778889
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc---------cc
Q 015159 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SF 249 (412)
Q Consensus 179 ~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---------~~ 249 (412)
++...+...+.+.||+|++.++..+.|++.-+.+|+.+.++.++|++..+++..+++.+|+.++...+. .+
T Consensus 90 s~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~n 169 (327)
T KOG1581|consen 90 SFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGREN 169 (327)
T ss_pred HHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999998865321 25
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHh-hhchHHHHH
Q 015159 250 NWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS-KVGMVKFIS 326 (412)
Q Consensus 250 ~~~G~~l~l~s~l~~a~~~v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 326 (412)
+++|+.++..+.+++++.+..++++++ ++++++++++.++++++......+ +..++ .+.++ ...++.++.
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li--~qg~~-----~~av~F~~~hp~~~~ 242 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLI--LQGHL-----LPAVSFIKEHPDVAF 242 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhh--cCCCC-----chHHHHHHcChhHHH
Confidence 689999999999999999999999985 478999999999999998886522 21111 11111 234567888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 015159 327 DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 327 ~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
+++..++++...|.+.|+.+++.++++.+.+++.|.++++++|.++||+++++.|++|..+++.|+.+-.+.+.+
T Consensus 243 Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 243 DILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998887776
No 13
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=3.3e-24 Score=201.82 Aligned_cols=251 Identities=16% Similarity=0.173 Sum_probs=200.6
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH-HHHHHHHHHHhhhhccchHHHH
Q 015159 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAV-CHALGHVTSNVSFAAVAVSFTH 202 (412)
Q Consensus 124 ~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~al~~~s~s~~~ 202 (412)
..+..|..+++...|..+.+.|++++.+++.++...+ .++++++..+..+. +..+++.+.+.|++|++++.+.
T Consensus 4 ~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ 77 (260)
T TIGR00950 4 TGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAA 77 (260)
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhH
Confidence 3456799888765589999999998888776654432 23444445555554 4568889999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc-ccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChh
Q 015159 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE-LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDST 281 (412)
Q Consensus 203 ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~-~~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~ 281 (412)
++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.+.++.||..++.++.
T Consensus 78 ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~ 157 (260)
T TIGR00950 78 LLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPE 157 (260)
T ss_pred HHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCch
Confidence 99999999999999999999999999999999999999876543 45567899999999999999999999998777744
Q ss_pred --hHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHH-HHHHHHHHHHhhccchhHHHHHH
Q 015159 282 --NIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFY-HLYNQLATNTLERVAPLTHAVGN 358 (412)
Q Consensus 282 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~-~~~~~~~~~~l~~~sa~~~sv~~ 358 (412)
....+.+.++.+++.|.....+.+... ....+..++..+++. ...+...++++++.++.+.++..
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~ 225 (260)
T TIGR00950 158 LLQFTGWVLLLGALLLLPFAWFLGPNPQA------------LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILA 225 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCc------------chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHH
Confidence 455567888888888776654422110 112244455555544 34556778999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHH
Q 015159 359 VLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGV 392 (412)
Q Consensus 359 ~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv 392 (412)
+++|+++++++++++||++++.+++|.++++.|+
T Consensus 226 ~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 226 LAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999986
No 14
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=1e-23 Score=202.29 Aligned_cols=275 Identities=13% Similarity=0.103 Sum_probs=193.6
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCC----CCCHHHHHHHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA----PIDSKLLKLLIPVAVCH 182 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 182 (412)
.+......++| .......|.. .+.+ |..+.++|++++.+++.++...+++++. ..+++.+......++..
T Consensus 10 ~~~~l~a~~~w----g~~~~~~k~~-~~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (296)
T PRK15430 10 VLLALAAYFIW----GIAPAYFKLI-YYVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLI 83 (296)
T ss_pred HHHHHHHHHHH----HHHHHHHHHh-cCCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 34444555555 3344555775 4566 9999999999988766544432211110 01233333344455666
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHHH
Q 015159 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNI 262 (412)
Q Consensus 183 ~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~l 262 (412)
..++.+.++|+++++++.+.++.++.|+++++++++++|||+++++|++++++++|+.++...+.+.. ++++++++
T Consensus 84 ~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~~----~~~l~aa~ 159 (296)
T PRK15430 84 GGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLP----IIALGLAF 159 (296)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCcc----HHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999998864332222 46788999
Q ss_pred HHHHHHHHHHHhcCCC--ChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHH
Q 015159 263 SFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (412)
Q Consensus 263 ~~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 340 (412)
+||.|.++.||...+. +......|+..++.+...+. .+.+.. . + .... ...+..++..++.....+.
T Consensus 160 ~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~--~----~~~~-~~~~~~~~~~g~~t~i~~~ 228 (296)
T PRK15430 160 SFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTS-H--M----GQNP-MSLNLLLIAAGIVTTVPLL 228 (296)
T ss_pred HHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcc-c--c----cCCc-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999975322 22333444444444332211 111100 0 0 0000 1112334444555556677
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~ 402 (412)
++++++++.+|...++..+++|+++++++++++||++++.+++|+++++.|+.+.......-
T Consensus 229 ~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~~ 290 (296)
T PRK15430 229 CFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIYT 290 (296)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999988887655443
No 15
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.94 E-value=9e-25 Score=209.22 Aligned_cols=270 Identities=12% Similarity=0.132 Sum_probs=213.9
Q ss_pred HHHHHHHHhh-CCChHHHHHHHHHHHHHHHHHHHHhCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH
Q 015159 125 NILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLP--KRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (412)
Q Consensus 125 ~~~~K~~~~~-f~~P~~l~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~ 201 (412)
+..+..+-+. ++.|.+.+++.++.-.++.......+.. +..+..++.+.++++.+++...++.+.+.|++|++++.+
T Consensus 29 ~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~ 108 (334)
T PF06027_consen 29 GTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSV 108 (334)
T ss_pred HHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHH
Confidence 3444444443 6689998888876655443333222222 222233455667778899999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc---------cccHHHHHHHHHHHHHHHHHHHHHH
Q 015159 202 HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------SFNWTGFISAMISNISFTYRSIYSK 272 (412)
Q Consensus 202 ~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---------~~~~~G~~l~l~s~l~~a~~~v~~k 272 (412)
+++.++..+++++++++++|+|+++.+++|++++++|++++...|. +....|++++++++++||++++++|
T Consensus 109 ~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E 188 (334)
T PF06027_consen 109 QLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLEE 188 (334)
T ss_pred HhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998876542 2347999999999999999999999
Q ss_pred HhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 015159 273 KAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPL 352 (412)
Q Consensus 273 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~ 352 (412)
+..++.+..+...+..+++.++..+...++|..++....|. ...+..++..+++.+......-..++..+|.
T Consensus 189 ~~v~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w~--------~~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt 260 (334)
T PF06027_consen 189 KLVKKAPRVEFLGMLGLFGFIISGIQLAILERSGIESIHWT--------SQVIGLLVGYALCLFLFYSLVPIVLRMSSAT 260 (334)
T ss_pred HhcccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhccCCC--------hhhHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 99999999999999999999999988888876655433222 1123333434444455555555778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhH
Q 015159 353 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 353 ~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~ 402 (412)
...+......+.++++++++||++++|..++|.+++++|+.+|+..++++
T Consensus 261 ~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 261 FFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred eeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 99998888999999999999999999999999999999999998765443
No 16
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.92 E-value=5.3e-27 Score=209.54 Aligned_cols=278 Identities=17% Similarity=0.134 Sum_probs=226.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALG 185 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 185 (412)
++..+.+..+. |++++++.+..|.+.+ .|..+.-.|+++-.+..+++....+... ..++...+.+++.|++++.+
T Consensus 36 p~~gl~l~~vs-~ff~~~~vv~t~~~e~---~p~e~a~~r~l~~mlit~pcliy~~~~v-~gp~g~R~~LiLRg~mG~tg 110 (346)
T KOG4510|consen 36 PNLGLLLLTVS-YFFNSCMVVSTKVLEN---DPMELASFRLLVRMLITYPCLIYYMQPV-IGPEGKRKWLILRGFMGFTG 110 (346)
T ss_pred CccCceehhhH-HHHhhHHHhhhhhhcc---ChhHhhhhhhhhehhhhheEEEEEeeee-ecCCCcEEEEEeehhhhhhH
Confidence 34444455555 7788888777776665 5888988998877776655443322111 11222334578899999999
Q ss_pred HHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC-----c---------ccccH
Q 015159 186 HVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT-----E---------LSFNW 251 (412)
Q Consensus 186 ~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~-----~---------~~~~~ 251 (412)
....|+|++|++.+.+.+|..++|+|+.++++.++||+++..+.++..+.+.||++++.. | .+.+.
T Consensus 111 vmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~ 190 (346)
T KOG4510|consen 111 VMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDI 190 (346)
T ss_pred HHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999998652 1 13456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 252 ~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
+|.+.++.++++.+...++.|++.++.|....+.|.++++++..++.......+++.+ ++.+ |+.++..
T Consensus 191 ~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~---------cgkd--r~l~~~l 259 (346)
T KOG4510|consen 191 PGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH---------CGKD--RWLFVNL 259 (346)
T ss_pred CchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHHHHHHHHHHHHHhhccceecCc---------cccc--eEEEEEe
Confidence 8999999999999999999999999999999999999999998887766666555422 2222 4455666
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
|+++++.|++..+.+++..|...++..+.+.+++.++.+++|||.+|+++|+|+++++.+..+....|
T Consensus 260 GvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 260 GVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred hhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998877555
No 17
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.91 E-value=3.8e-24 Score=187.91 Aligned_cols=269 Identities=16% Similarity=0.166 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHhh-----------CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015159 122 VIFNILNKRIYNY-----------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (412)
Q Consensus 122 ~~~~~~~K~~~~~-----------f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (412)
....+.++++... |.+...+.++|+....++.-+.... ++..+.++..-+.+...++.+.++++..|
T Consensus 26 F~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~i--r~~~~~D~t~~~~YaAcs~sYLlAMVssN 103 (337)
T KOG1580|consen 26 FVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLI--RKKTEIDNTPTKMYAACSASYLLAMVSSN 103 (337)
T ss_pred hhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheee--cccccccCCcchHHHHHHHHHHHHHHhcc
Confidence 3445666666542 7778889999998888765433322 23334444445667888899999999999
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc-------cccHHHHHHHHHHHHH
Q 015159 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-------SFNWTGFISAMISNIS 263 (412)
Q Consensus 191 ~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-------~~~~~G~~l~l~s~l~ 263 (412)
.|++|+|.++..+-|++.|+.+|+++.++.+++++|+++.+++++++||+++.+.+. ..-..|-++.++|.-.
T Consensus 104 ~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~m 183 (337)
T KOG1580|consen 104 QALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAM 183 (337)
T ss_pred chhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999988642 1224788999999999
Q ss_pred HHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHHHHHHHHh-cchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHH
Q 015159 264 FTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIV-EGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (412)
Q Consensus 264 ~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 340 (412)
+++....++|+-.. -+...++.|+++.+.+.+..-..+. |.|++.. ....++..|+.+...++++.++|.
T Consensus 184 DGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~y-------F~~RhP~~~~~l~l~ai~s~LGQ~ 256 (337)
T KOG1580|consen 184 DGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFY-------FVQRHPYVFWDLTLLAIASCLGQW 256 (337)
T ss_pred cccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHH-------HHHhccHHHHHHHHHHHHHHhhhH
Confidence 99999999988644 4566899999999998776544443 2233221 133456778899999999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
+.|..+...+|++.|++++.++.++++.|+++|+++++..||+|..+++.+...=....
T Consensus 257 fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 257 FIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 99999999999999999999999999999999999999999999999999988655443
No 18
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=1.6e-24 Score=194.41 Aligned_cols=291 Identities=18% Similarity=0.299 Sum_probs=246.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh----CCChHHHHHHHHHHHHHHHHHHHHh--CCC-----CCCCCCHHHHHHHHHHHHH
Q 015159 113 FFFMWYFLNVIFNILNKRIYNY----FPYPYFVSVIHLLVGVVYCLVSWAV--GLP-----KRAPIDSKLLKLLIPVAVC 181 (412)
Q Consensus 113 ~~~~w~~~~~~~~~~~K~~~~~----f~~P~~l~~~r~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~l~ 181 (412)
.+..++.+++++.+.||+++.. .+.|.+.++.|+++...+|..+... +.+ ...+.+-+..+.++++++.
T Consensus 32 ~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV 111 (347)
T KOG1442|consen 32 AVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV 111 (347)
T ss_pred hccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe
Confidence 3344457778888999999986 5689999999999998888754332 111 1123566778889999999
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc---ccccHHHHHHHH
Q 015159 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAM 258 (412)
Q Consensus 182 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~~l~l 258 (412)
+.++..+.|++++|++++++.+-+++..+|+++++++++|||-+..-..+..+++.|--+-+..| ..+++.|.++++
T Consensus 112 fi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~GvifGV 191 (347)
T KOG1442|consen 112 FILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIGVIFGV 191 (347)
T ss_pred eeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988887776 467899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCC--hhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHH
Q 015159 259 ISNISFTYRSIYSKKAMTDMD--STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH 336 (412)
Q Consensus 259 ~s~l~~a~~~v~~kk~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ 336 (412)
.+.++-|+..++.||.....+ -+.+.+|+++.++++++|...+.++.+-... + ++.....+|..+.++|++++
T Consensus 192 laSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~-~----~~l~a~~Fw~~mtLsglfgF 266 (347)
T KOG1442|consen 192 LASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVG-F----PHLPAIKFWILMTLSGLFGF 266 (347)
T ss_pred HHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcC-c----ccchHHHHHHHHHHHHHHHH
Confidence 999999999999999876554 3488999999999999998887654332111 1 23434568889999999999
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHHHHHhh
Q 015159 337 LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEKRQ 408 (412)
Q Consensus 337 ~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~~~~ 408 (412)
..++...+-+|.+||+|+.+..+.|-....++++.+.+|..+..-|-|-++++.|...|++.|+.+.+++.+
T Consensus 267 ~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 267 AMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred HhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999999999999999999877666543
No 19
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.90 E-value=2.4e-21 Score=184.58 Aligned_cols=262 Identities=15% Similarity=0.147 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhC--CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 015159 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVG--LPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVA 197 (412)
Q Consensus 120 ~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s 197 (412)
+....+...|...++-+ +. .+.++.++.+++.++...+ .++.++.+++.+...+..++....++.+.+.++++.+
T Consensus 12 ~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~ 88 (281)
T TIGR03340 12 MHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYHHAD 88 (281)
T ss_pred HHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 33566677886666422 32 3555555555554443322 2222333445555556666677788999999999999
Q ss_pred hHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc-cccHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015159 198 VSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-SFNWTGFISAMISNISFTYRSIYSKKAMT 276 (412)
Q Consensus 198 ~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-~~~~~G~~l~l~s~l~~a~~~v~~kk~~~ 276 (412)
++.+..+.++.|+++++++++++|||+++++|+|++++++|+.++...+. ..+..|+.++++++++|+.|.++.||..+
T Consensus 89 ~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~~~~ 168 (281)
T TIGR03340 89 VGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKAAAL 168 (281)
T ss_pred hhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhcccccc
Confidence 99999999999999999999999999999999999999999998765432 34567888999999999999999988755
Q ss_pred CCChhhHHHHHHHHHHHHH-HHHHHH---hcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchh
Q 015159 277 DMDSTNIYAYISIIALFVC-IPPAII---VEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPL 352 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~ 352 (412)
+.++.....+....+.+.. .|.... .+..... . .....+..+...+++....+..+++++++.++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~ 238 (281)
T TIGR03340 169 GVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSMF---------P-YARQILPSATLGGLMIGGAYALVLWAMTRLPVA 238 (281)
T ss_pred chhcccccHHHHHHHHHHHHHHHHHHHHHHhccchh---------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCce
Confidence 5544321111111222211 222221 1111000 0 001123334444555556667788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHH
Q 015159 353 THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (412)
Q Consensus 353 ~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l 394 (412)
..+...++.|+++++++++++||++++.+++|+++++.|+.+
T Consensus 239 ~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 239 TVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred EEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999999999999999999875
No 20
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.87 E-value=1e-18 Score=166.28 Aligned_cols=263 Identities=18% Similarity=0.201 Sum_probs=191.1
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT 201 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~ 201 (412)
.......|...++...+....+.|++++.+........+.....+..++.+...+..++.......+.+.++++++++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (292)
T COG0697 20 GLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVA 99 (292)
T ss_pred HHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 34445556666553335666666988887763333332211112222222344555556667888999999999999999
Q ss_pred HHHHhhhHHHHHHHHH-HHhCcccChhhHHHHHHHHHHHHhhhcCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 015159 202 HTIKALEPFFNAAASQ-FILGQQLPLTLWLSLAPVVIGVSMASLTELSF---NWTGFISAMISNISFTYRSIYSKKAMTD 277 (412)
Q Consensus 202 ~ii~~~~Pvf~~lls~-~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~---~~~G~~l~l~s~l~~a~~~v~~kk~~~~ 277 (412)
+++.++.|+++.++++ ++++||++++++.+++++++|+.++...+... +..|++++++++++++++.++.|+.. +
T Consensus 100 ~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~~~~~~~~~~-~ 178 (292)
T COG0697 100 SLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLS-R 178 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 9999999999999997 77799999999999999999999998866543 35899999999999999999999987 6
Q ss_pred CChhhHHH-HHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHH-HHHHHHHHHhhccchhHHH
Q 015159 278 MDSTNIYA-YISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYH-LYNQLATNTLERVAPLTHA 355 (412)
Q Consensus 278 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~l~~~sa~~~s 355 (412)
.++..... ++.........+. ...... ... ....+..+...+++.. ..+..+++.+++.++...+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~----------~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~ 245 (292)
T COG0697 179 LGPVTLALLLQLLLALLLLLLF--FLSGFG-API----------LSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVA 245 (292)
T ss_pred CChHHHHHHHHHHHHHHHHHHH--Hhcccc-ccC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHH
Confidence 66666665 4443222222211 111111 000 0112444555565555 4567778999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 356 VGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 356 v~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
+..++.|+.+++++++++||+++..+++|..+++.|+.+.+..
T Consensus 246 ~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 246 LLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999998866
No 21
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.86 E-value=9.9e-19 Score=164.35 Aligned_cols=244 Identities=11% Similarity=0.033 Sum_probs=167.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHH-HhCCCC-----CCCCCH-HHHHHHHHHHH
Q 015159 108 LVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPK-----RAPIDS-KLLKLLIPVAV 180 (412)
Q Consensus 108 l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~-~~~~~~-----~~~~~~-~~~~~~~~~~l 180 (412)
+......++| .......|. ..+.+ |..+.++|++++.+++.+.. ..++++ .++.++ +.+..+...++
T Consensus 5 ~~~i~a~~~w----g~~~~~~k~-~~~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 5 IVSLLASFLF----GYMYYYSKL-LKPLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred HHHHHHHHHH----HHHHHHHHH-hccCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 4445555666 444566787 44565 99999999999887765443 222211 011112 22344667777
Q ss_pred HHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHH
Q 015159 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMIS 260 (412)
Q Consensus 181 ~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s 260 (412)
+...++.+.++|+++++++.++++.++.|+++++++++++|||+++++|++++++++|++++..++.+.+ .+++++
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~a 154 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVL 154 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHH
Confidence 7888999999999999999999999999999999999999999999999999999999998764332222 357889
Q ss_pred HHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHH
Q 015159 261 NISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (412)
Q Consensus 261 ~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 340 (412)
++||+.|.++.||..+ .+..+.... .+...+...+.....+.+.. . .......|..++..|++....+.
T Consensus 155 a~~~a~~~i~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~l~~~g~~t~i~~~ 223 (256)
T TIGR00688 155 AFSFTAYGLIRKALKN-TDLAGFCLE-TLSLMPVAIYYLLQTDFATV-Q--------QTNPFPIWLLLVLAGLITGTPLL 223 (256)
T ss_pred HHHHHHHHHHHhhcCC-CCcchHHHH-HHHHHHHHHHHHHHhccCcc-c--------ccCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999753 233322221 11222122111111111100 0 00011124455566666666778
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILA 372 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~ 372 (412)
+.++++++.++...++..+++|+++.+++++.
T Consensus 224 l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 224 AFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 88899999999999999999999999999764
No 22
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.8e-20 Score=166.04 Aligned_cols=285 Identities=15% Similarity=0.153 Sum_probs=230.2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhh--CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH 182 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~--f~-~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 182 (412)
+..+.++++...++......++++.+++. |. +.|.+++.|+++-..+.++.+..-..+++..+ |+.+..++++.
T Consensus 40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP---~rtY~~la~~t 116 (367)
T KOG1582|consen 40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIP---WRTYVILAFLT 116 (367)
T ss_pred hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecc---hhHhhhhHhhh
Confidence 34566666777777777778999999987 54 77999999998865544433222123333333 45577888888
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc----ccccHHHHHHHH
Q 015159 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----LSFNWTGFISAM 258 (412)
Q Consensus 183 ~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~----~~~~~~G~~l~l 258 (412)
...+.+.|-++.|++.++..+.|+|..+.+++.+.++-++|+++.++.+..+..+|.+++.+.| .+||..|..+.-
T Consensus 117 ~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIs 196 (367)
T KOG1582|consen 117 VGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMIS 196 (367)
T ss_pred hhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHH
Confidence 8899999999999999999999999999999999999999999999999999999999998876 478999999999
Q ss_pred HHHHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchH-HHHHHHHHHHHHH
Q 015159 259 ISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMV-KFISDLFWVGMFY 335 (412)
Q Consensus 259 ~s~l~~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~g~~~ 335 (412)
++.+++|.-...++|.++. -+..++++|...+|.++++.+....++... .|. ....++ ..+...++.++.+
T Consensus 197 gALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~---a~~---fcaehp~~tyGy~~~~s~~g 270 (367)
T KOG1582|consen 197 GALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFS---AWT---FCAEHPVRTYGYAFLFSLAG 270 (367)
T ss_pred HHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchh---hhH---HHHhCcHhHHHHHHHHHHHh
Confidence 9999999888888888753 456689999999999988877665543211 111 011122 2456677778888
Q ss_pred HHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 336 HLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 336 ~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
++++.+....++..+|.+.+.+++.++.+++++|+++|.+++|.+..-|..+++.|+++..+.|
T Consensus 271 ylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 271 YLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 8888888888999999999999999999999999999999999999999999999999877665
No 23
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.85 E-value=4.8e-20 Score=160.93 Aligned_cols=284 Identities=15% Similarity=0.195 Sum_probs=237.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015159 113 FFFMWYFLNVIFNILNKRIYNY--FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSN 190 (412)
Q Consensus 113 ~~~~w~~~~~~~~~~~K~~~~~--f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 190 (412)
..+.+.+.++.+.+.||++++. |+.-+.+.+.|.+++.+.+.+..+.+..+ ++....|.+++.+++.....+...
T Consensus 10 ~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~---fR~t~aK~WfpiSfLLv~MIyt~S 86 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE---FRLTKAKKWFPISFLLVVMIYTSS 86 (309)
T ss_pred HHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh---eehhhhhhhcCHHHHHHHHHHhcc
Confidence 3456777778899999999986 66678889999988887776665544332 224456678999999999999999
Q ss_pred hhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc--------cccHHHHHHHHHHHH
Q 015159 191 VSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNI 262 (412)
Q Consensus 191 ~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~s~l 262 (412)
-+++|.+++.+++.|.+..+.++.....++|.|.+-.+..+..+.++.-+...++|. ..| .|++|+..+++
T Consensus 87 KsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~Ncl 165 (309)
T COG5070 87 KSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFTNCL 165 (309)
T ss_pred cceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEehhhH
Confidence 999999999999999999999999999999999999999999999999999998886 344 59999999999
Q ss_pred HHHHHHHHHHHhc--CCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHH
Q 015159 263 SFTYRSIYSKKAM--TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQ 340 (412)
Q Consensus 263 ~~a~~~v~~kk~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~ 340 (412)
..+.+-...||.. .+....+.++|.++++.++++.+.+++|.|.... ... .... ..+..++.+|++.++..+
T Consensus 166 ssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n--~an---nl~~-d~l~am~ISgl~svgiSy 239 (309)
T COG5070 166 SSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGN--LAN---NLSV-DSLMAMFISGLCSVGISY 239 (309)
T ss_pred hHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcch--hhc---CCCh-HHHHHHHHHHHHHhhhhh
Confidence 9999988887754 4556678899999999999999999998765421 110 1111 224567778999999999
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~~ 406 (412)
..-|+++.+|..+.++++.+++....+.|.++|||+.+...+....+-+.+..+|...+.++++++
T Consensus 240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~q 305 (309)
T COG5070 240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQNQ 305 (309)
T ss_pred ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999887655543
No 24
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.81 E-value=2.5e-17 Score=146.98 Aligned_cols=251 Identities=15% Similarity=0.160 Sum_probs=203.4
Q ss_pred HHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHh
Q 015159 127 LNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKA 206 (412)
Q Consensus 127 ~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~ 206 (412)
+.|.++..+. |.-++++|..++++.++..+ +|.+.+.+++++..++..|......|.+.|.+++.+|.+.+..+-+
T Consensus 30 ~Ak~LFP~vG-~~g~t~lRl~~aaLIll~l~---RPwr~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF 105 (292)
T COG5006 30 FAKSLFPLVG-AAGVTALRLAIAALILLALF---RPWRRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEF 105 (292)
T ss_pred HHHHHccccC-hhhHHHHHHHHHHHHHHHHh---hHHHhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhh
Confidence 4577776665 89999999999998877665 3555677888999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc---ccccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhH
Q 015159 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---LSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNI 283 (412)
Q Consensus 207 ~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~---~~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~ 283 (412)
+-|+.+.+++ .+|. ++.+.+.+.+.|+.+..-.. .+.|+.|..+++.+..||+.|.+..||..+..+...-
T Consensus 106 ~GPL~vA~~~----sRr~--~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g 179 (292)
T COG5006 106 TGPLAVALLS----SRRL--RDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAG 179 (292)
T ss_pred ccHHHHHHHh----ccch--hhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchH
Confidence 9999998875 3444 45555566777877664322 4678999999999999999999999999877788888
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHH-HHHHHHhhccchhHHHHHHHHHH
Q 015159 284 YAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN-QLATNTLERVAPLTHAVGNVLKR 362 (412)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~l~~~sa~~~sv~~~l~~ 362 (412)
+.+-+.++.++.+|+.....++.+.. +..+..-+..++++...- ..-..++++.++-++++...++|
T Consensus 180 ~a~gm~vAaviv~Pig~~~ag~~l~~------------p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLeP 247 (292)
T COG5006 180 VAVGMLVAALIVLPIGAAQAGPALFS------------PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEP 247 (292)
T ss_pred HHHHHHHHHHHHhhhhhhhcchhhcC------------hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhH
Confidence 99999999999999988665554422 223334444555555553 34567789999999999999999
Q ss_pred HHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 363 VFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 363 v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
.++.+.+++++||.+|+.||+|+++++.++.-.+...
T Consensus 248 a~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~ 284 (292)
T COG5006 248 ALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTA 284 (292)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999999999999887555443
No 25
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.79 E-value=1.6e-17 Score=149.89 Aligned_cols=274 Identities=16% Similarity=0.212 Sum_probs=205.7
Q ss_pred HHHHHHHHHHhh-------CCChHHHHHHHHHHHHHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHHH
Q 015159 123 IFNILNKRIYNY-------FPYPYFVSVIHLLVGVVYCLVSWAVGLPKR----------------APIDSKLLKLLIPVA 179 (412)
Q Consensus 123 ~~~~~~K~~~~~-------f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 179 (412)
...++.||.-+. |.+|+..+...|+.-.+++..+...+.+.. .+++ -+.+++.+
T Consensus 17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~---p~lfl~Pa 93 (372)
T KOG3912|consen 17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN---PVLFLPPA 93 (372)
T ss_pred HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC---cceecChH
Confidence 334667887663 788998887766654454444433221110 1122 23457789
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc----------ccc
Q 015159 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE----------LSF 249 (412)
Q Consensus 180 l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~----------~~~ 249 (412)
+|...+..+.|.++.+++++.+|+++....+|+.+++..+++++++.++|+++..+.+|++++...| .+.
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~~d~s~ 173 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPYTDYSS 173 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999886643 233
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcC--CCChhhHHHHHHHHHHHHHHHHHHHhc---ch-hh--hh----cchhhhHh
Q 015159 250 NWTGFISAMISNISFTYRSIYSKKAMT--DMDSTNIYAYISIIALFVCIPPAIIVE---GP-QL--IK----HGLSDAIS 317 (412)
Q Consensus 250 ~~~G~~l~l~s~l~~a~~~v~~kk~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~--~~----~~~~~~~~ 317 (412)
-..|+++.+.+-+.-|.+.++.+|..+ +++|.+...|..++|.+++...++... .. .. .+ .+|.|.+.
T Consensus 174 iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~~ 253 (372)
T KOG3912|consen 174 IITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAFA 253 (372)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHHH
Confidence 478999999999999999999999885 578999999999999766655444321 11 11 11 12333333
Q ss_pred hhc-hHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 318 KVG-MVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 318 ~~~-~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
... .+.....+...-+.-.++|+......|..|+.+..+...++..+..+++.....|.++..|+.|.++.+.|+.+|+
T Consensus 254 ~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 254 ALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 2233323333333334557777778899999999999999999999999999999999999999999999999998
Q ss_pred HHH
Q 015159 397 YIK 399 (412)
Q Consensus 397 ~~~ 399 (412)
..-
T Consensus 334 ~il 336 (372)
T KOG3912|consen 334 QIL 336 (372)
T ss_pred HHH
Confidence 543
No 26
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=4e-19 Score=160.12 Aligned_cols=274 Identities=14% Similarity=0.144 Sum_probs=207.2
Q ss_pred HHHHHHHhhCC-ChHHHHHHHHHHHHHHHHHHHHhCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhc-cchHHHH
Q 015159 126 ILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGL-PKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAA-VAVSFTH 202 (412)
Q Consensus 126 ~~~K~~~~~f~-~P~~l~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~-~s~s~~~ 202 (412)
+.-+.+.+..| ....+++.||++.+.-.+++.- +. ..+++.+ ++.+...-.++...++++|+++++ ++.+...
T Consensus 20 v~lE~L~~~~pgsgNLITFaqFlFia~eGlif~s-kf~~~k~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHi 95 (330)
T KOG1583|consen 20 VFLELLVRNEPGSGNLITFAQFLFIATEGLIFTS-KFFTVKPKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHI 95 (330)
T ss_pred HHHHHHHHhCCCCeeehHHHHHHHHHHhceeeec-cccccCCCCc---hhhhheehheeeeeeeeccceeeecccceEEE
Confidence 44466666665 3488999999988776655431 11 1113333 344566666777888999999998 9999999
Q ss_pred HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC---cc--------------ccc--HHHHHHHHHHHHH
Q 015159 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT---EL--------------SFN--WTGFISAMISNIS 263 (412)
Q Consensus 203 ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~---~~--------------~~~--~~G~~l~l~s~l~ 263 (412)
++++..++-+|+++++++|+|++.+|+.+++++.+|+++.++. |. .+- ..|+.+..++.+.
T Consensus 96 IfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~ 175 (330)
T KOG1583|consen 96 IFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLL 175 (330)
T ss_pred EEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987652 11 011 3688888899999
Q ss_pred HHHHHHHHHHhcCCC--ChhhHHHHHHHHHHHHHHHHHHH-hcchhhhhcchhhhHh--hhchHHHHHHHHHHHHHHHHH
Q 015159 264 FTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAII-VEGPQLIKHGLSDAIS--KVGMVKFISDLFWVGMFYHLY 338 (412)
Q Consensus 264 ~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~ 338 (412)
.|.-.++++...+++ ++-+.++|...++++.++...-- ...+.....+-...++ ....|..|..++.+.+..+++
T Consensus 176 sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~C 255 (330)
T KOG1583|consen 176 SAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFC 255 (330)
T ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHH
Confidence 999999999887654 67799999999888766532110 0001100000000001 112566788899999998888
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHH
Q 015159 339 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQME 403 (412)
Q Consensus 339 ~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~ 403 (412)
--..+.+..+.++++.+++-++++.++.++|++.|.+++|+++|+|.++++.|.++|.....+.+
T Consensus 256 ikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~~~ 320 (330)
T KOG1583|consen 256 IKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNHPK 320 (330)
T ss_pred HHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 77777888999999999999999999999999999999999999999999999999987765544
No 27
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.76 E-value=6.1e-16 Score=147.80 Aligned_cols=262 Identities=17% Similarity=0.195 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHH-HhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015159 109 VTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSW-AVGLPKRAPIDSKLLKLLIPVAVCHALGHV 187 (412)
Q Consensus 109 ~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 187 (412)
..++.+++| .......|+.. .++.++.. |..++.+++..+. ..+.++ ...++.+..-+..|++...++.
T Consensus 5 ~~lia~~~w----Gs~g~~~k~~~-g~~~~~~~---~~~~g~l~~~~~~~~~~~~~--~~~~~~~~~g~l~G~~w~ig~~ 74 (290)
T TIGR00776 5 IALIPALFW----GSFVLINVKIG-GGPYSQTL---GTTFGALILSIAIAIFVLPE--FWALSIFLVGLLSGAFWALGQI 74 (290)
T ss_pred HHHHHHHHH----hhhHHHHhccC-CCHHHHHH---HHHHHHHHHHHHHHHHhCCc--ccccHHHHHHHHHHHHHHhhhh
Confidence 344455556 33344556654 34423332 5666666554332 222222 1224455555666677788899
Q ss_pred HHHhhhhccchHHHHHHHh-hhHHHHHHHHHHHhCcccChhh----HHHHHHHHHHHHhhhcCccc-------cc-HHHH
Q 015159 188 TSNVSFAAVAVSFTHTIKA-LEPFFNAAASQFILGQQLPLTL----WLSLAPVVIGVSMASLTELS-------FN-WTGF 254 (412)
Q Consensus 188 ~~~~al~~~s~s~~~ii~~-~~Pvf~~lls~~~l~er~~~~~----~l~l~l~~~Gv~l~~~~~~~-------~~-~~G~ 254 (412)
+++.+.++++++.+..+.+ +.++++.+++.+++||+.+.++ +++++++++|+++....+.+ .+ ..|+
T Consensus 75 ~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi 154 (290)
T TIGR00776 75 NQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGI 154 (290)
T ss_pred hHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHH
Confidence 9999999999999999988 8899999999999999999999 99999999999987653211 33 7899
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHH---HHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 255 ISAMISNISFTYRSIYSKKAMTDMDSTNIYAYIS---IIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 255 ~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
++++++.++|+.+.+..|+. ++|+.+....+. +++..+..+... ...+. .....+. .+..
T Consensus 155 ~~~l~sg~~y~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~-------------~~~~~~~-~~~~ 217 (290)
T TIGR00776 155 LLLLMSTIGYLVYVVVAKAF--GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPL-------------KKYAILL-NILP 217 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHc--CCCcceehhHHHHHHHHHHHHHHHHHh-cccch-------------HHHHHHH-HHHH
Confidence 99999999999999999976 478887744443 333333332210 00110 0112233 3336
Q ss_pred HHHHHHHHHHHHHHhh-ccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhH----HHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLE-RVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSY 397 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~-~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~----iG~~lvl~Gv~l~~~ 397 (412)
|++....+.+.+...+ +.++.+.++...++|+.+.++++++++|+.+..++ +|.++++.|+.+...
T Consensus 218 Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 218 GLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 7775555566668888 99999999999999999999999999999999999 999999999987654
No 28
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.72 E-value=3.6e-14 Score=130.24 Aligned_cols=280 Identities=13% Similarity=0.143 Sum_probs=204.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHh-CCCCC---CCCCHHHHHHHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKR---APIDSKLLKLLIPVAVC 181 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~l~ 181 (412)
+.+..+..-++| ...-++.|.+. ..+ +..+...|.+.+..++.+.... +..+. ...+++.+..+...+++
T Consensus 8 Gil~~l~Ay~lw----G~lp~y~kll~-~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 8 GILLALLAYLLW----GLLPLYFKLLE-PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALL 81 (293)
T ss_pred hhHHHHHHHHHH----HHHHHHHHHHc-cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHH
Confidence 444555555555 44445556654 344 7899999999887776543322 22111 11233445556666677
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHHHHHHHHH
Q 015159 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGFISAMISN 261 (412)
Q Consensus 182 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~~l~l~s~ 261 (412)
...+...+.||.++-.+-.+++=....|++.++++.+++|||+++.||++++++.+||..-.....+++|..+.+ +
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~l----a 157 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALAL----A 157 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH----H
Confidence 777888999999998888899999999999999999999999999999999999999999888778888765544 5
Q ss_pred HHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHH
Q 015159 262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQL 341 (412)
Q Consensus 262 l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 341 (412)
++|++|...-|+. ++|..+-.+...+.-++..+......+...-. ........+..+...|.....--..
T Consensus 158 ~sf~~Ygl~RK~~--~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~--------~~~~~~~~~~LLv~aG~vTavpL~l 227 (293)
T COG2962 158 LSFGLYGLLRKKL--KVDALTGLTLETLLLLPVALIYLLFLADSGQF--------LQQNANSLWLLLVLAGLVTAVPLLL 227 (293)
T ss_pred HHHHHHHHHHHhc--CCchHHhHHHHHHHHhHHHHHHHHHHhcCchh--------hhcCCchHHHHHHHhhHHHHHHHHH
Confidence 6888888766654 66777777766666666655555544322200 0111223455666777766655555
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHhHHHH
Q 015159 342 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQMEEE 405 (412)
Q Consensus 342 ~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~ 405 (412)
...+-++.+-.+.++..++.|....+++++++||+++..+++..+++-.|+.+|....-+++++
T Consensus 228 f~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~ 291 (293)
T COG2962 228 FAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARK 291 (293)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5577899999999999999999999999999999999999999999999999999877654443
No 29
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.72 E-value=1.1e-15 Score=141.83 Aligned_cols=212 Identities=16% Similarity=0.182 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc-
Q 015159 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL- 247 (412)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~- 247 (412)
++....+...++++.+.+.+.+.++++++++++++++++..+++++++++++|+|++.+||+++++.++|+++...++.
T Consensus 14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 4455677888999999999999999999999999999999999999999999999999999999999999998755321
Q ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHHHHhcCCC--ChhhHHHHHHHHHHHHHHHHHHHhcchhhhh
Q 015159 248 ----------------SFNWTGFISAMISNISFTYRSIYSKKAMTDM--DSTNIYAYISIIALFVCIPPAIIVEGPQLIK 309 (412)
Q Consensus 248 ----------------~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (412)
.....|+++.++++++.++..++.||.+++- +.+......++.|.++.++.....++.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~ 173 (244)
T PF04142_consen 94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISE 173 (244)
T ss_pred ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1136899999999999999999999999764 4445566667777777666554444433333
Q ss_pred cchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHH
Q 015159 310 HGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 388 (412)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lv 388 (412)
.++.+ ..+. ..|..++..++.+... -..+|+.+.+.-.....+..+++.++++++||.++|...++|..++
T Consensus 174 ~g~f~---G~~~-~~~~~i~~~a~gGllv----a~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 174 SGFFH---GYSW-WVWIVIFLQAIGGLLV----AFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred CCchh---hcch-HHHHHHHHHHHhhHHH----HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 33221 1111 2333333334433333 3567999999999999999999999999999999999999998753
No 30
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.72 E-value=5.3e-17 Score=152.52 Aligned_cols=225 Identities=18% Similarity=0.246 Sum_probs=182.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc--
Q 015159 170 KLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL-- 247 (412)
Q Consensus 170 ~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~-- 247 (412)
+..+..+..+.+.+++++++|.||.+++++..+++.+++-+|+.+++.++.+||+++.+.+++++.++||++++.+|.
T Consensus 157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~ 236 (416)
T KOG2765|consen 157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ 236 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence 445556667777889999999999999999999999999999999999999999999999999999999999988742
Q ss_pred ------cccHHHHHHHHHHHHHHHHHHHHHHHhcCC----CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHh
Q 015159 248 ------SFNWTGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS 317 (412)
Q Consensus 248 ------~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (412)
+....|.++++++++.||.|.++.||...+ +|--.+..|..++.++++.|..++.+......... +
T Consensus 237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~l----P 312 (416)
T KOG2765|consen 237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFEL----P 312 (416)
T ss_pred cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccC----C
Confidence 334799999999999999999999998744 45556677888888888887776654221111111 0
Q ss_pred hhchHHHHHHHHHHHHHHHHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 318 KVGMVKFISDLFWVGMFYHLY-NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 318 ~~~~~~~~~~l~~~g~~~~~~-~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
. ... ...++..++.+... -++|.++.-.++|+...+...+...++++.+.++-|+++|+.+++|.+.+++|.+..+
T Consensus 313 ~--~~q-~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn 389 (416)
T KOG2765|consen 313 S--STQ-FSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN 389 (416)
T ss_pred C--Cce-eEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence 1 011 22344444445444 4888899999999999999999999999999999999999999999999999999998
Q ss_pred HHHHh
Q 015159 397 YIKAQ 401 (412)
Q Consensus 397 ~~~~~ 401 (412)
+..+.
T Consensus 390 ~~~~~ 394 (416)
T KOG2765|consen 390 ISSEN 394 (416)
T ss_pred ccccc
Confidence 76653
No 31
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.72 E-value=2.4e-16 Score=136.20 Aligned_cols=145 Identities=32% Similarity=0.465 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-------CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhc-hHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMT-------DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVG-MVKF 324 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 324 (412)
|++++++|.++.++++++.|+.++ +.|+.+++.|+++.+.+.++|.++..|+++...........+.. ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 789999999999999999998773 47899999999999999999999999987754322111000111 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 325 ISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 325 ~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
+..++..|++++++|+..+.+++++||+++++.+.+|+++.+++|+++|||++|+.+++|.++.+.|+++|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 7788889999999999999999999999999999999999999999999999999999999999999999974
No 32
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1e-13 Score=130.83 Aligned_cols=224 Identities=13% Similarity=0.138 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc----
Q 015159 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE---- 246 (412)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~---- 246 (412)
....+...++++.+.+.+.+.++.+.+++++++...+..+.|+++..++++||.+++||.++++.++|+.++-.+.
T Consensus 91 ~~lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~ 170 (345)
T KOG2234|consen 91 ETLKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPT 170 (345)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4456777789999988899999999999999999999999999999999999999999999999999999987311
Q ss_pred -------ccccHHHHHHHHHHHHHHHHHHHHHHHhcCC--CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHh
Q 015159 247 -------LSFNWTGFISAMISNISFTYRSIYSKKAMTD--MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAIS 317 (412)
Q Consensus 247 -------~~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (412)
....+.|+...+.+++..++..++.+|++++ .+.+....-.+.+|.++.+......++.... +.+.+.
T Consensus 171 ~a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~---~~gff~ 247 (345)
T KOG2234|consen 171 GAKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAIN---EYGFFY 247 (345)
T ss_pred CccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccc---cCCccc
Confidence 1234799999999999999999999999854 5555555556666666666555555544432 222111
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 318 KVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 318 ~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
.+. ...|..++..++.+.... ..+|+.+-+.-.....+-.+++.+.|+.+||.++|...++|+.+++.++.+|+.
T Consensus 248 G~s-~~vw~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~ 322 (345)
T KOG2234|consen 248 GYS-SIVWLVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSL 322 (345)
T ss_pred ccc-HHHHHHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhc
Confidence 211 124555555565554444 445888888888888889999999999999999999999999999999999996
Q ss_pred HHHhH
Q 015159 398 IKAQM 402 (412)
Q Consensus 398 ~~~~~ 402 (412)
.+.+.
T Consensus 323 ~P~~~ 327 (345)
T KOG2234|consen 323 YPARD 327 (345)
T ss_pred CCccc
Confidence 65543
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.46 E-value=8.4e-15 Score=130.85 Aligned_cols=257 Identities=9% Similarity=0.063 Sum_probs=196.3
Q ss_pred HHHHHHHhh-CCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHH
Q 015159 126 ILNKRIYNY-FPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI 204 (412)
Q Consensus 126 ~~~K~~~~~-f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii 204 (412)
+.+.++-.. .+.|...+++....-+++.-++...+. +.-+-.|+.++++++...-++++...|.||++.....++
T Consensus 35 ~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~----~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lL 110 (336)
T KOG2766|consen 35 FTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR----KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLL 110 (336)
T ss_pred hhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh----HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHH
Confidence 333333333 557988888887655554433333222 223345666888899888888889999999999999999
Q ss_pred HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc--------ccccHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015159 205 KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE--------LSFNWTGFISAMISNISFTYRSIYSKKAMT 276 (412)
Q Consensus 205 ~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~--------~~~~~~G~~l~l~s~l~~a~~~v~~kk~~~ 276 (412)
.+-..+.+++++|+++|-|+.+.++.|+++.+.|+.+++..| .+....|+++.++++-+||..|+.++.+.+
T Consensus 111 Dcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk 190 (336)
T KOG2766|consen 111 DCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK 190 (336)
T ss_pred HHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh
Confidence 999999999999999999999999999999999999887644 234468999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH
Q 015159 277 DMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAV 356 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv 356 (412)
+.|..+++....++|.++..+- ++.|..+...-.| +.-....+...++-++...+.-..++..|+....+
T Consensus 191 n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~tl~w---------~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nl 260 (336)
T KOG2766|consen 191 NADRVELMGFLGLFGAIISAIQ-FIFERHHVSTLHW---------DSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNL 260 (336)
T ss_pred cCcHHHHHHHHHHHHHHHHHHH-HhhhccceeeEee---------hHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEh
Confidence 9999999999999999988876 5555443322111 11112222244444555555557778889988888
Q ss_pred HHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 357 GNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 357 ~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
.-......++++ ..||-++.|...+....+..|.++|.-.
T Consensus 261 slLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r 300 (336)
T KOG2766|consen 261 SLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR 300 (336)
T ss_pred hHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence 877888888887 7888889999999999999999999533
No 34
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.30 E-value=1.9e-11 Score=112.44 Aligned_cols=189 Identities=16% Similarity=0.132 Sum_probs=134.8
Q ss_pred cchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc---------------------------c
Q 015159 196 VAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL---------------------------S 248 (412)
Q Consensus 196 ~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~---------------------------~ 248 (412)
++++.....++..++++++..+.+.+||++..++++.++...|+.....+|. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 5678889999999999999999999999999999999999999885332111 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHH----hcchh-hhhcchhhhHhhhchHH
Q 015159 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAII----VEGPQ-LIKHGLSDAISKVGMVK 323 (412)
Q Consensus 249 ~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~ 323 (412)
..+.|..+.+.+.++.++..+++++..++.+. +.|...++..+..+.... ..... ....++ ..+++.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 153 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT---MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF-----FIGYPT 153 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC---chHHHHHHHHHHHHHHHHHHHhhcccchhhccCc-----ccCCch
Confidence 34678888899999999999999998765432 244444444333333211 11111 101110 112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 324 FISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 324 ~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
..+.++ +.....+.+..+.+++.++.+.++...++++++.++|+++|||+++..+++|..+++.|+.+|
T Consensus 154 ~~~~~~---~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 154 AVWIVG---LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred HHHHHH---HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 222222 223333455668889999999999999999999999999999999999999999999998765
No 35
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.27 E-value=4.5e-11 Score=98.93 Aligned_cols=120 Identities=17% Similarity=0.316 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHHHhhhhccchH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAPIDSKLLKLLIPVAVC-HALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~al~~~s~s 199 (412)
....+.+|...++++ |...+++|++++.+ +.+... .+..+....+++.+...+..+++ ..+++.+.+.++++++++
T Consensus 4 a~~~~~~k~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 81 (126)
T PF00892_consen 4 AIYSVFSKKLLKKIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISAS 81 (126)
T ss_pred eeHHHHHHHHhccCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchh
Confidence 455678899988876 99999999999987 443322 22222244566667777777777 478999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhh
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
..+++..++|+++++++++++||++++++++|++++++|++++.
T Consensus 82 ~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 82 IVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998864
No 36
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.24 E-value=7.4e-11 Score=95.00 Aligned_cols=122 Identities=21% Similarity=0.257 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRA--PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s 199 (412)
....++.|..+++.+ |.+-+++|.++..+.+........+... ..+++.|..+.+-|+...++..+++.|++.-.++
T Consensus 16 ~L~~iF~KIGl~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as 94 (140)
T COG2510 16 GLTPIFAKIGLEGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKAS 94 (140)
T ss_pred HHHHHHHHHhccccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcc
Confidence 455688899999887 9999999999988877655443322222 2577888889999988899999999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
...-+..++|+++++++++++|||++..+|+|++++++|+++++.
T Consensus 95 ~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 95 RVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred eEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 999999999999999999999999999999999999999987653
No 37
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.23 E-value=4e-11 Score=103.51 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=170.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc--c
Q 015159 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL--S 248 (412)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~--~ 248 (412)
..++..+.+++..+.++.+..+++.++++.++-+.+|.--|+.+++++.+|+|+...++++.++++.|++++.+.|. .
T Consensus 52 ~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a 131 (290)
T KOG4314|consen 52 FFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHA 131 (290)
T ss_pred eeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhh
Confidence 34556788888889999999999999999999999999999999999999999999999999999999999987653 5
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHH-----HHHhcchhhhhcchhhhHhhhchHH
Q 015159 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPP-----AIIVEGPQLIKHGLSDAISKVGMVK 323 (412)
Q Consensus 249 ~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (412)
.++.|+.++++|+...|+|.|+.|+...+-+--+...+.+..|..-+... .+.+.+.+.+++ + .. .
T Consensus 132 ~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qs-F----A~----~ 202 (290)
T KOG4314|consen 132 DEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQS-F----AA----A 202 (290)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHH-H----hh----C
Confidence 57999999999999999999999998866544444444444443322211 111111111110 0 00 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 324 FISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 324 ~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
-|..+...+.....+|+.....+....|...|+............+.++-+-..+...+.|..++..|..+.-....
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d 279 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPED 279 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccc
Confidence 15556655556667777777778888999999999888888899998888888999999999999999988765443
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.21 E-value=1.1e-10 Score=94.05 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
-.++++++++++++..++.|--.+++||..-+...+++..+++..+.+....++.... -.+..|..++.+|
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~---------~~~k~~lflilSG 74 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGE---------IGPKSWLFLILSG 74 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHhcCceecccc---------cCcceehhhhHHH
Confidence 3578999999999999999999999999999999999988888877776654443210 1123477788899
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 333 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
+.+.+..++.|++++.-.+.......-..+++++++|++++||++|..+++|++++.+|..+.
T Consensus 75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailv 137 (140)
T COG2510 75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILV 137 (140)
T ss_pred HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeE
Confidence 988888899999999999999999999999999999999999999999999999999998764
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.11 E-value=7.5e-10 Score=91.53 Aligned_cols=124 Identities=21% Similarity=0.245 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHH-HHHHHH
Q 015159 262 ISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMF-YHLYNQ 340 (412)
Q Consensus 262 l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-~~~~~~ 340 (412)
++|+.+.++.|+..++.|+.....+....+.+ +++.....+..+.. ...... +..+...+.+ ....+.
T Consensus 1 ~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~ 69 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKISPLSITFWRFLIAGI-LLILLLILGRKPFK---------NLSPRQ-WLWLLFLGLLGTALAYL 69 (126)
T ss_pred ceeeeHHHHHHHHhccCCHHHHHHHHHHHHHH-HHHHHHhhcccccc---------CCChhh-hhhhhHhhccceehHHH
Confidence 47899999999999999999999999999998 66666655433211 111111 3334444444 456677
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
..++++++.++...++...+.|+++.++++++++|++++.+++|.++++.|+.+.+
T Consensus 70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999998764
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.04 E-value=1.7e-09 Score=88.55 Aligned_cols=105 Identities=19% Similarity=0.330 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHHh-CCCCC--CCCCHHHHHHHHHHHHHHH-HHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHH
Q 015159 143 VIHLLVGVVYCLVSWAV-GLPKR--APIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF 218 (412)
Q Consensus 143 ~~r~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~l~~~-~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~ 218 (412)
.+|++++.+.+.+.... ++.+. +..+++.+..++..+++.. .++.+.++|+++.+ +....+.++.|+++++++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 46777777766544332 21111 1112234455666677765 88999999999999 58889999999999999999
Q ss_pred HhCcccChhhHHHHHHHHHHHHhhhcCccc
Q 015159 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELS 248 (412)
Q Consensus 219 ~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~ 248 (412)
++|||+++++|++++++++|++++..+|.+
T Consensus 81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 81 FFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 999999999999999999999999887754
No 41
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=98.97 E-value=2.4e-07 Score=86.14 Aligned_cols=210 Identities=18% Similarity=0.175 Sum_probs=155.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHH-hhhHHHHHHHHHHHhCcccChhhH----HHHHHHHHHHHhhh
Q 015159 169 SKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLW----LSLAPVVIGVSMAS 243 (412)
Q Consensus 169 ~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~-~~~Pvf~~lls~~~l~er~~~~~~----l~l~l~~~Gv~l~~ 243 (412)
.+.+..-++.|++...++...+.|++++.++.+--+. ..+.+.+.+++.++++|--+..++ ++++++++|+++.+
T Consensus 42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts 121 (269)
T PF06800_consen 42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS 121 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence 3667778888999999999999999999998766554 778888999999999997776665 58899999999988
Q ss_pred cCccc--------ccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhh
Q 015159 244 LTELS--------FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDA 315 (412)
Q Consensus 244 ~~~~~--------~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (412)
..|.+ ....|+...+++.+.|..|.+..|- .+.|++....=+++--.+-.+.+....+.+..
T Consensus 122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~--~~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~-------- 191 (269)
T PF06800_consen 122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA--FHVSGWSAFLPQAIGMLIGAFIFNLFSKKPFF-------- 191 (269)
T ss_pred cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHh--cCCChhHhHHHHHHHHHHHHHHHhhccccccc--------
Confidence 75431 2256999999999999999999765 45677766665544333332322222211110
Q ss_pred HhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchh----hHHHHHHHHHH
Q 015159 316 ISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQ----TGIGTVIAIAG 391 (412)
Q Consensus 316 ~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~----~~iG~~lvl~G 391 (412)
.+. -+.-+..|++....|...+...++.+..+.=...-+..+++.+.+.++++|+=+.. .++|.++++.|
T Consensus 192 -~k~-----~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G 265 (269)
T PF06800_consen 192 -EKK-----SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG 265 (269)
T ss_pred -ccc-----hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence 011 12234456767777877778888888888888888999999999999999987754 66788888887
Q ss_pred HHH
Q 015159 392 VAA 394 (412)
Q Consensus 392 v~l 394 (412)
..+
T Consensus 266 ~il 268 (269)
T PF06800_consen 266 AIL 268 (269)
T ss_pred hhc
Confidence 653
No 42
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.91 E-value=9.6e-08 Score=91.71 Aligned_cols=140 Identities=14% Similarity=0.126 Sum_probs=108.1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHH
Q 015159 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 328 (412)
Q Consensus 249 ~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (412)
....|.++.+++.++|+...++.|.. .++++.++..+...++.+++++............ ........+...
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 76 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYVPADEILTHRVIWSFFFMVVLMSICRQWSYLK-------TLIQTPQKIFML 76 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-------HHHcCHHHHHHH
Confidence 34689999999999999999999765 7799999999999999887776654332111100 000001112223
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 329 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 329 ~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
...++.....+.+.++.+++.++...++..++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 33445455567788899999999999999999999999999999999999999999999999999764
No 43
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.85 E-value=1.6e-07 Score=88.25 Aligned_cols=140 Identities=17% Similarity=0.242 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 252 ~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
.|.++.++++++|+...+..|.. .++++.++.++..+++.+.+.+..............+ ........+..+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-KPLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERL----KRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHH----hCcccchHHHHHHHH
Confidence 48899999999999999999974 6799999999999999888776554432211000000 000111123345556
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
|++....+.+.+.+++++++.+.++..++.|+++.++++++++|+++..+++|.++.++|+.+..
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 77666777888899999999999999999999999999999999999999999999999998654
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.73 E-value=3.6e-07 Score=87.04 Aligned_cols=132 Identities=11% Similarity=0.025 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhc-chhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 254 FISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVE-GPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 254 ~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
+++.++++++++..+++.||..++.++. ..+....+.+.+.|+..... ...+ . . .....+..+...+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~-----~----~-~~~~~~~~~~~~~ 70 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEPDF--LWWALLAHSVLLTPYGLWYLAQVGW-----S----R-LPATFWLLLAISA 70 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchhHH--HHHHHHHHHHHHHHHHHHhcccCCC-----C----C-cchhhHHHHHHHH
Confidence 5688999999999999999887764443 35555666666776655421 1111 0 0 0112233455566
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 333 MFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
+....++.+.++++++.++...++..+..|+++.+++++++||+++..+++|.++++.|+.+...
T Consensus 71 ~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 71 VANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 66777778888899999999999999999999999999999999999999999999999987653
No 45
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.72 E-value=8.3e-07 Score=83.31 Aligned_cols=118 Identities=20% Similarity=0.118 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHhhCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhhhccchH
Q 015159 122 VIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~al~~~s~s 199 (412)
....+..|+..++.+ .+..+..+++.++.+++.+......+.. ..+.+.+..++..+++. ..+..++++++++.+++
T Consensus 141 a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 219 (260)
T TIGR00950 141 ALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPS 219 (260)
T ss_pred HHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch
Confidence 555677888877654 2345565788888877765544322222 23555666666666664 57889999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHH
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVS 240 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~ 240 (412)
.+.++..++|++++++++++++|+++..++.|.+++++|+.
T Consensus 220 ~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~ 260 (260)
T TIGR00950 220 AASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL 260 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999863
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.52 E-value=3.9e-06 Score=82.50 Aligned_cols=136 Identities=13% Similarity=0.214 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAM-TDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
-+..+++-.++++..+++.|..+ ..+++....+|-..++.++++|+....+.....+ ...+ ..+..+...
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~--------~~~~-~~~~~l~l~ 84 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLP--------PLSV-SILSKIGLL 84 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcccC--------cchH-HHHHHHHHH
Confidence 34566778889999999999877 5699999999999999999998877654221100 0011 123445556
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHH------hCCccchhhHHHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILA------FGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~------fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
|+++..++.+.+..++++++...++..++.|+++.++++++ ++|+++..+++|.++.++|+.+...
T Consensus 85 g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 85 GFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 66665566677899999999999999999999999999999 6999999999999999999987654
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.51 E-value=6.6e-06 Score=78.89 Aligned_cols=120 Identities=22% Similarity=0.279 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhhhccchHH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVSF 200 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~al~~~s~s~ 200 (412)
....+..|+..++.+ |.... +..+++.+.+.++...... ....+...+...+..+++. .+++.++++++++++++.
T Consensus 161 a~~~v~~r~~~~~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~~~~~~a~~ 237 (293)
T PRK10532 161 AIYILSGQRAGAEHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTALPYSLEMIALTRLPTRT 237 (293)
T ss_pred HHHHHHHHHHhccCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhH
Confidence 445566677765554 55554 4445555554443332221 1223445554455566654 477889999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 201 ~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
++++..++|++..++++++++|+++..+++|.+++++|++....
T Consensus 238 as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 238 FGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998754
No 48
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.44 E-value=8.9e-06 Score=66.08 Aligned_cols=65 Identities=15% Similarity=0.228 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 180 l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
+++.+...+...+++++|.+.+..+-++.++++++++++++|||+++++++|++++++|++++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 44567888999999999999999999999999999999999999999999999999999988753
No 49
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.44 E-value=6.7e-07 Score=85.60 Aligned_cols=215 Identities=19% Similarity=0.171 Sum_probs=118.6
Q ss_pred HHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc-C--cc-ccc---H-
Q 015159 180 VCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL-T--EL-SFN---W- 251 (412)
Q Consensus 180 l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~-~--~~-~~~---~- 251 (412)
+++.++..+...|+.+.|.+..+-+.+...++.++++..++|||++++++.|.+++++|.+++.. + +. ..+ .
T Consensus 58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~ 137 (300)
T PF05653_consen 58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI 137 (300)
T ss_pred HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999987643 1 11 111 0
Q ss_pred -----HHHHH--HHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHH
Q 015159 252 -----TGFIS--AMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKF 324 (412)
Q Consensus 252 -----~G~~l--~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (412)
.+++. .+...++..+.....+|.. +.+........+++|..-.+ ..-.... .....+.. -.....+..
T Consensus 138 ~~~~~~~fl~y~~~~~~~~~~L~~~~~~r~g-~~~i~vyi~i~sl~Gs~tvl-~~K~i~~--~i~~~~~g-~~~f~~~~~ 212 (300)
T PF05653_consen 138 ALLSQPGFLVYFILVLVLILILIFFIKPRYG-RRNILVYISICSLIGSFTVL-SAKAISI--LIKLTFSG-DNQFTYPLT 212 (300)
T ss_pred HHhcCcceehhHHHHHHHHHHHHHhhcchhc-ccceEEEEEEeccccchhhh-HHHHHHH--HHHHHhcC-chhhhhhHH
Confidence 11111 1111111112222222221 11111111111122211100 0000000 00000000 012222334
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHHhCCc--cch----hhHHHHHHHHHHHHHHH
Q 015159 325 ISDLFWVGMFYHLYN-QLATNTLERVAPLTHA-VGNVLKRVFVIGFSILAFGNK--IST----QTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 325 ~~~l~~~g~~~~~~~-~~~~~~l~~~sa~~~s-v~~~l~~v~~ii~s~~~fge~--~t~----~~~iG~~lvl~Gv~l~~ 396 (412)
|..++....+ ...| ....+++++.++.... +....-...+++-|.++|+|- .++ ....|..+++.|+.+-+
T Consensus 213 y~l~~~~v~~-~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~GV~lL~ 291 (300)
T PF05653_consen 213 YLLLLVLVVT-AVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIGVFLLS 291 (300)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHhhheee
Confidence 4444333333 3333 4555788888775543 344455567888899999964 455 45677888999998876
Q ss_pred HHHH
Q 015159 397 YIKA 400 (412)
Q Consensus 397 ~~~~ 400 (412)
..|.
T Consensus 292 ~~~~ 295 (300)
T PF05653_consen 292 SSKD 295 (300)
T ss_pred ccCc
Confidence 5543
No 50
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.43 E-value=1.2e-05 Score=77.00 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHhhhhccchH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAV-GLPKRAPIDSKLLKLLIPVAVCH-ALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~al~~~s~s 199 (412)
....+.+|+... +++...+++++.++.+.+.++... +.+.....+.+.+..++..+++. .++..++++++++.+++
T Consensus 163 a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~ 240 (292)
T PRK11272 163 AFGSVWSSRLPL--PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240 (292)
T ss_pred HHHHHHHHhcCC--CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHH
Confidence 334455666533 235666778888887766554332 22111112445566666667764 47888999999999999
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCc
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~ 246 (412)
.+.++..++|++.+++++++++|+++..+++|.++++.|+.+....+
T Consensus 241 ~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~ 287 (292)
T PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK 287 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876543
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.43 E-value=8.9e-06 Score=78.07 Aligned_cols=118 Identities=14% Similarity=0.197 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHH-HHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLV-SWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSF 200 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~ 200 (412)
...++++|+..++.+ |.... .. .+.+.+.+ ......+ ....+.+.+..++..++...++..+.++++++.+++.
T Consensus 169 A~~~v~~k~~~~~~~-~~~~~--~~-~~~~~l~~~~~~~~~~-~~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~ 243 (295)
T PRK11689 169 AAYCNVTRKYARGKN-GITLF--FI-LTALALWIKYFLSPQP-AMVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTL 243 (295)
T ss_pred HHHHHHHhhccCCCC-chhHH--HH-HHHHHHHHHHHHhcCc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHH
Confidence 455667777665443 54432 22 22222222 2222211 2234556666666666666678999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 201 ~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
++++...+|++.+++++++++|+++..+++|.++++.|+.+...
T Consensus 244 ~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 244 LATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 99999999999999999999999999999999999999987654
No 52
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.39 E-value=7.3e-06 Score=68.29 Aligned_cols=121 Identities=14% Similarity=0.038 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHH
Q 015159 252 TGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWV 331 (412)
Q Consensus 252 ~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 331 (412)
.|+++.+++.++.+...++.|+-+++.+..+.... .. .. + .. ..+ + + ..++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~-~~-~~---~-~~-~~~------------------p--~-~~i~l 53 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPLLSHAWD-FI-AA---L-LA-FGL------------------A--L-RAVLL 53 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCCccchhH-HH-HH---H-HH-Hhc------------------c--H-HHHHH
Confidence 47889999999999999999998776554332211 10 00 0 00 000 0 0 01222
Q ss_pred HHHHHHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH--HhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 332 GMFYHLY-NQLATNTLERVAPLTHAVGNVLKRVFVIGFSIL--AFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 332 g~~~~~~-~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~--~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
|+..+.. .+++..++++.+............+...+.++. +|||++|+.+++|.+++++|+++.++.++
T Consensus 54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 3333332 345568889999888877777777777777774 89999999999999999999999875443
No 53
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.33 E-value=3.2e-05 Score=71.75 Aligned_cols=140 Identities=16% Similarity=0.166 Sum_probs=108.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHH
Q 015159 250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (412)
Q Consensus 250 ~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (412)
+..|+++++.+-+.|++--.+.|-+ +..++.++..+..+.+.++++........+.... +....+..+..+.
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~-------~~~~~p~~~~~~~ 76 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-EPLPATEILAHRVIWSFPFMLALLFLLRQWRELK-------QLLKQPKTLLMLA 76 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH-------HHHhCcHHHHHHH
Confidence 3469999999999999998888755 8889999999999999998887766654333221 1222333444444
Q ss_pred HHHHHHHHHH-HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 330 WVGMFYHLYN-QLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 330 ~~g~~~~~~~-~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
..++.. ..| ....++..+-..+..|...+++|.+.++++.++++|+++..|++..++..+||..-.+.
T Consensus 77 l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~ 145 (293)
T COG2962 77 LTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL 145 (293)
T ss_pred HHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 444433 334 34448888889999999999999999999999999999999999999999999865543
No 54
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.31 E-value=3e-05 Score=76.28 Aligned_cols=136 Identities=14% Similarity=0.064 Sum_probs=101.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-hhhHHHHHHHHHHHHHHHHHHHhc--chhhhhcchhhhHhhhchHHHHH
Q 015159 250 NWTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVE--GPQLIKHGLSDAISKVGMVKFIS 326 (412)
Q Consensus 250 ~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 326 (412)
++.-..+++.--.+...++++.|..++..+ |+.+..++.+++.+++.+...... .++. ......+.
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-----------~~~~~~~~ 115 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRI-----------KSLKLFLK 115 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-----------CCHHHHHH
Confidence 444444444455555667888899888899 999999999999877655432110 0111 00122355
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 327 DLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 327 ~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
.++..|+++...+...+..++.+++...++...+.|+++++++.++++|+++..+++|.+++++|+.+..
T Consensus 116 ~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 116 NFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 5666677777666666788899999999999999999999999999999999999999999999999754
No 55
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.29 E-value=0.001 Score=64.57 Aligned_cols=229 Identities=12% Similarity=0.023 Sum_probs=139.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHH-HHHhhhHHHHHHHHHHHhCccc---C----hhhHHHHHHHHHH
Q 015159 167 IDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQL---P----LTLWLSLAPVVIG 238 (412)
Q Consensus 167 ~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~-ii~~~~Pvf~~lls~~~l~er~---~----~~~~l~l~l~~~G 238 (412)
.+.+.+..-++.|++...++.....+++++.++... +...++-++..++..++++|=. + ..-.++++++++|
T Consensus 68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG 147 (345)
T PRK13499 68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG 147 (345)
T ss_pred cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence 345667777888899999999999999999998865 4457888999999999988632 2 3357899999999
Q ss_pred HHhhhc----Ccc---------cccHHHHHHHHHHHHHHHHHHH-------HHHHhc-CCCChhhHHHHHHH---HHHHH
Q 015159 239 VSMASL----TEL---------SFNWTGFISAMISNISFTYRSI-------YSKKAM-TDMDSTNIYAYISI---IALFV 294 (412)
Q Consensus 239 v~l~~~----~~~---------~~~~~G~~l~l~s~l~~a~~~v-------~~kk~~-~~~~~~~~~~~~~~---~~~~~ 294 (412)
+++... .|. .....|++.++++.+.++.++. ..+... .+.++.....-+.+ ++.++
T Consensus 148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~ 227 (345)
T PRK13499 148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAI 227 (345)
T ss_pred HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Confidence 999877 332 1236899999999999999994 333211 23444432222222 33332
Q ss_pred HHHHHHHhcchhhhhcchhhhHhhhch-HHHH---HHHHHHHHHHHHHHHHHHHHhhccchh----HHHHHHHHHHHHHH
Q 015159 295 CIPPAIIVEGPQLIKHGLSDAISKVGM-VKFI---SDLFWVGMFYHLYNQLATNTLERVAPL----THAVGNVLKRVFVI 366 (412)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~l~~~g~~~~~~~~~~~~~l~~~sa~----~~sv~~~l~~v~~i 366 (412)
.-++........ ...+.+..+.... +.++ ..-.+.|+.-+..+++....-++.+.. ...+.+.+..+++.
T Consensus 228 ~n~~~~~~~~~k--~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viist 305 (345)
T PRK13499 228 TNLGFCFIRLAK--NKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGN 305 (345)
T ss_pred HHHHHHHHHHhh--CCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHH
Confidence 222111110000 0000000011110 0111 122334555555555555555555332 23355467778888
Q ss_pred HHHHHHhCCccc------hhhHHHHHHHHHHHHHHHHH
Q 015159 367 GFSILAFGNKIS------TQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 367 i~s~~~fge~~t------~~~~iG~~lvl~Gv~l~~~~ 398 (412)
+.++ +++|.=+ ...++|.+++++|..+....
T Consensus 306 lwGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 306 LWGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred Hhhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence 8888 5998766 67899999999999876543
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.28 E-value=4.9e-05 Score=73.06 Aligned_cols=124 Identities=17% Similarity=0.189 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhhCCCh--HHHHHHHHHHHHHHHHHH-HHhCCCC-----CCCCCHHHHHHHHHHHHHHH-HHHHHHHhh
Q 015159 122 VIFNILNKRIYNYFPYP--YFVSVIHLLVGVVYCLVS-WAVGLPK-----RAPIDSKLLKLLIPVAVCHA-LGHVTSNVS 192 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P--~~l~~~r~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~l~~~-~~~~~~~~a 192 (412)
....+++|+..+..+.| .....+..+++.+..... .....+. ....+.+.+..++..+++.. ++..+.+.+
T Consensus 156 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~ 235 (299)
T PRK11453 156 ACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTL 235 (299)
T ss_pred HHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777765544433 344455555554433322 1222111 11235556666666666554 778899999
Q ss_pred hhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 193 l~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
+++.++..+.++..++|++..++++++++|+++..+++|.+++++|+.+...+
T Consensus 236 l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 236 LGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999887653
No 57
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.17 E-value=0.00011 Score=63.05 Aligned_cols=125 Identities=14% Similarity=0.143 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHhh------CCChHHHHHHHHHHHHHHHHHHHH-hCCCCCCC-----------CCHHHHHHHHHHHH
Q 015159 119 FLNVIFNILNKRIYNY------FPYPYFVSVIHLLVGVVYCLVSWA-VGLPKRAP-----------IDSKLLKLLIPVAV 180 (412)
Q Consensus 119 ~~~~~~~~~~K~~~~~------f~~P~~l~~~r~~~~~~~~~~~~~-~~~~~~~~-----------~~~~~~~~~~~~~l 180 (412)
++.....++.|+.+++ -..|..+.......+.+.+.+... .+.++..+ .+.+.+..++..++
T Consensus 10 ~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (153)
T PF03151_consen 10 LFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGL 89 (153)
T ss_pred HHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHH
Confidence 3444555666776665 225788887777777777665433 33222110 02344566667777
Q ss_pred HHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhh
Q 015159 181 CHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 181 ~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
+....+...+..++++++-+.+++....-+++.++++++++|+++..+++|+++.++|+.+.+
T Consensus 90 ~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 90 LAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 788899999999999999999999999999999999999999999999999999999998654
No 58
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.11 E-value=9.6e-05 Score=71.11 Aligned_cols=122 Identities=16% Similarity=0.151 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHhcCC-CChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHH
Q 015159 263 SFTYRSIYSKKAMTD-MDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQL 341 (412)
Q Consensus 263 ~~a~~~v~~kk~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 341 (412)
+....+++.|...++ ..|..+.+++..++.+.+.+.... ...... ... ...+..++..|++....+.+
T Consensus 13 ~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~~-~~~~~~~~~~g~~~~~~~~~ 81 (302)
T TIGR00817 13 LNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS-GLPKRL---------KIS-SALLKLLLPVAIVHTIGHVT 81 (302)
T ss_pred HHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh-CCCCCC---------CCC-HHHHHHHHHHHHHHHHHHHH
Confidence 344455677887777 557788888888877665543111 101000 001 11244555667776666778
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 342 ATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 342 ~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
.+..++++++...++...+.|+++.++++++++|+++..+++|.+++++|+.+.
T Consensus 82 ~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~ 135 (302)
T TIGR00817 82 SNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALA 135 (302)
T ss_pred HHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhh
Confidence 889999999999999999999999999999999999999999999999999764
No 59
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=97.96 E-value=0.00031 Score=57.21 Aligned_cols=72 Identities=18% Similarity=0.202 Sum_probs=59.5
Q ss_pred HHHHHHHHH-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 328 LFWVGMFYH-LYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 328 l~~~g~~~~-~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
++..|+++. ..+...+.+++..++ ..++...+.|+++.+++.++|+|+++..+++|.+++++|+.+....+.
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 444455554 445666788888885 777888899999999999999999999999999999999999887653
No 60
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.86 E-value=0.0012 Score=62.36 Aligned_cols=119 Identities=28% Similarity=0.386 Sum_probs=86.7
Q ss_pred HHHHHHHHHHhhCCChHHHHH-HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHhhhhccchHH
Q 015159 123 IFNILNKRIYNYFPYPYFVSV-IHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAVSF 200 (412)
Q Consensus 123 ~~~~~~K~~~~~f~~P~~l~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~al~~~s~s~ 200 (412)
.....+|+.. ..+ +..... +++............ .... .+.+.+.+..+...+++.. .++.+.+.+++..+++.
T Consensus 168 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 243 (292)
T COG0697 168 LYTALVKRLS-RLG-PVTLALLLQLLLALLLLLLFFL-SGFG-APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASL 243 (292)
T ss_pred HHHHHHHHhc-CCC-hHHHHHHHHHHHHHHHHHHHHh-cccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH
Confidence 4556667665 222 444444 444422222222222 1111 3445666777788888777 68999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 201 THTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 201 ~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
.+.+..+.|++.+++++++++|+++..+++|.++++.|+.+....
T Consensus 244 ~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 244 VALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999987654
No 61
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.81 E-value=0.001 Score=53.92 Aligned_cols=58 Identities=17% Similarity=0.079 Sum_probs=50.8
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 339 NQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 339 ~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
.++...++++.+.......-.+.++.+.++|+++|||++|+.+++|.+++++|+.+..
T Consensus 51 ~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 51 MVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3455577899988887777779999999999999999999999999999999998754
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.81 E-value=0.00025 Score=67.90 Aligned_cols=132 Identities=13% Similarity=0.078 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
|++++++++++|+...+..|+.. +.++.+.. ...++.+++.........+.. .....+..-+..|
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~-g~~~~~~~--~~~~g~l~~~~~~~~~~~~~~------------~~~~~~~~g~l~G 66 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG-GGPYSQTL--GTTFGALILSIAIAIFVLPEF------------WALSIFLVGLLSG 66 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC-CCHHHHHH--HHHHHHHHHHHHHHHHhCCcc------------cccHHHHHHHHHH
Confidence 67899999999999999999876 55665554 244454444433333221111 1123344455567
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHH-HHHHHHHHHHHHHhCCccchhh----HHHHHHHHHHHHHHHHHH
Q 015159 333 MFYHLYNQLATNTLERVAPLTHAVGNV-LKRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa~~~sv~~~-l~~v~~ii~s~~~fge~~t~~~----~iG~~lvl~Gv~l~~~~~ 399 (412)
+.....|+..+.++++.+....-...+ +.++++.+++.++|+|+.+..+ ++|.++++.|+.+....+
T Consensus 67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~ 138 (290)
T TIGR00776 67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK 138 (290)
T ss_pred HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence 777777888889999988877755555 8888999999999999999999 999999999999876554
No 63
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.78 E-value=0.0002 Score=59.65 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHH--HhCcccChhhHHHHHHHHHHHHhhhcCc
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQF--ILGQQLPLTLWLSLAPVVIGVSMASLTE 246 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~--~l~er~~~~~~l~l~l~~~Gv~l~~~~~ 246 (412)
+...-+++.++..+.+++++..+++.+.-+.+..++++.+.++. ++||++++.+++|++++++|++++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 34444567788999999999999999999999999899888885 8999999999999999999999987543
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.67 E-value=0.00059 Score=55.92 Aligned_cols=71 Identities=15% Similarity=0.242 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
.+...+++..+.++...+++++|.+.+..+ ....-+.++++++++++|++++.+++++.++++|++.+...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 355566677888999999999999997777 57899999999999999999999999999999999987654
No 65
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.59 E-value=0.0015 Score=52.53 Aligned_cols=69 Identities=16% Similarity=0.172 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHH-HHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhh
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHT-IKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~~i-i~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
.+...+++..+..+...+++++|.+.+.- -....-+.+.+.+++++||++++.+++++.+++.|++...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 44455666678888999999999988554 4567789999999999999999999999999999998753
No 66
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.59 E-value=0.0022 Score=61.80 Aligned_cols=136 Identities=15% Similarity=0.278 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC-ChHHHHHHHHHHHHHHHHHHHHh---CCCC-CCC---CCHHHHHHHHHHHHH
Q 015159 110 TGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAV---GLPK-RAP---IDSKLLKLLIPVAVC 181 (412)
Q Consensus 110 ~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~~~~~~~~~~---~~~~-~~~---~~~~~~~~~~~~~l~ 181 (412)
..+++++..++......++|+++++++ .|+...+...+++.+...+.... +... ..+ ..++.+..++..+++
T Consensus 155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~ 234 (303)
T PF08449_consen 155 GIILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLT 234 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHH
Confidence 334455555666666678888888755 56778777777776665543332 1111 000 122356677788888
Q ss_pred HHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 182 HALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 182 ~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
...++.+.+.-.+..++-..+++..+.-+++++++.+++++++++.+|.|+++++.|..+-...
T Consensus 235 ~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~ 298 (303)
T PF08449_consen 235 GALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYA 298 (303)
T ss_pred HHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHh
Confidence 8888888888889999999999999999999999999999999999999999999999876543
No 67
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.58 E-value=0.0012 Score=53.30 Aligned_cols=70 Identities=16% Similarity=0.209 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 176 ~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
...-+++.....+...+++++|.+.+.-+ ....-+.+.+.+++++||++++.+++++.++++|++++...
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 44455666788888999999999998777 55789999999999999999999999999999999988654
No 68
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.00015 Score=68.19 Aligned_cols=214 Identities=18% Similarity=0.160 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCccc----------
Q 015159 179 AVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELS---------- 248 (412)
Q Consensus 179 ~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~---------- 248 (412)
-+.+.++...++.|+.+.|.+..+-+.+++.+..++++..+++||+++...+|.+++++|-.+++.....
T Consensus 71 ~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el 150 (335)
T KOG2922|consen 71 MLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEV 150 (335)
T ss_pred HHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHH
Confidence 3456689999999999999999999999999999999999999999999999999999998877652210
Q ss_pred ----ccHHHHHHHHHHHHH-HHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHH--h-cchhhhhcchhhhHhhhc
Q 015159 249 ----FNWTGFISAMISNIS-FTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAII--V-EGPQLIKHGLSDAISKVG 320 (412)
Q Consensus 249 ----~~~~G~~l~l~s~l~-~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~ 320 (412)
.+ ++++.-.+-.+. ..+-..+.+ .+....+++.|..+.+.+-.+-..-. . +.-...-.+. .+..
T Consensus 151 ~~~~~~-~~Fliy~~~iil~~~il~~~~~---p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~----~ql~ 222 (335)
T KOG2922|consen 151 WELATE-PGFLVYVIIIILIVLILIFFYA---PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN----NQLF 222 (335)
T ss_pred HHHhcC-ccHHHHHHHHHHHHHHHheeec---ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC----cccc
Confidence 11 222211111111 111111111 12233345566665555432111000 0 0000000000 1223
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHHhCCc--cc----hhhHHHHHHHHHHHH
Q 015159 321 MVKFISDLFWVGMFYHLYNQLATNTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNK--IS----TQTGIGTVIAIAGVA 393 (412)
Q Consensus 321 ~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~-sv~~~l~~v~~ii~s~~~fge~--~t----~~~~iG~~lvl~Gv~ 393 (412)
.+..|..++....+.........++++..++... .+...+-..++++.|.++|+|= .+ ...+.|+..++.|+.
T Consensus 223 ~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~G~f 302 (335)
T KOG2922|consen 223 YPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFLGIF 302 (335)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhheee
Confidence 3344544444333333322344577777766554 4555666778899999999863 22 346788899999998
Q ss_pred HHHHHHH
Q 015159 394 AYSYIKA 400 (412)
Q Consensus 394 l~~~~~~ 400 (412)
+....|.
T Consensus 303 lL~~~kd 309 (335)
T KOG2922|consen 303 LLHRTKD 309 (335)
T ss_pred Eeeeecc
Confidence 8765544
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.0012 Score=52.33 Aligned_cols=71 Identities=18% Similarity=0.201 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHH-HHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFT-HTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~-~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
.+..-+++..+..+.-.+++++|++.+ .+-...-.+.+.+.++++++|+.+..+++++.++++|++.....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 455556666788889999999999884 55667789999999999999999999999999999999987543
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.48 E-value=0.0021 Score=51.47 Aligned_cols=70 Identities=17% Similarity=0.160 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
.+...+++..+.++...+++.+|.+.+.-+ ....-+.+.+.+++++||++++.+++++.++++|++.+..
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 445556677888899999999999886554 5588999999999999999999999999999999998653
No 71
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.47 E-value=0.0048 Score=56.32 Aligned_cols=121 Identities=22% Similarity=0.245 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHhhhhccch
Q 015159 120 LNVIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHA-LGHVTSNVSFAAVAV 198 (412)
Q Consensus 120 ~~~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~al~~~s~ 198 (412)
++..+++..|.+-..-+ ...-...-+.+++++.+++....- ...-++...+..-+..+++.. +-..+...++...|.
T Consensus 159 ~Wa~YIv~G~r~g~~~~-g~~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~ 236 (292)
T COG5006 159 CWALYIVLGQRAGRAEH-GTAGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPA 236 (292)
T ss_pred HHHHHHHHcchhcccCC-CchHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCCh
Confidence 33667777777764343 333444556777776665544211 112235555555566666655 667789999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 199 SFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 199 s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
..+.++.+++|.+.++.++++++|+++..||++++.++.+.+=.
T Consensus 237 ~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~ 280 (292)
T COG5006 237 RTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS 280 (292)
T ss_pred hHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999988877633
No 72
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.34 E-value=3.7e-05 Score=69.44 Aligned_cols=239 Identities=14% Similarity=0.145 Sum_probs=156.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHH
Q 015159 137 YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAA 215 (412)
Q Consensus 137 ~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~ll 215 (412)
.|...+.--.+-+.++.++.+.. ..+..+.+.+..-+.-|++...++...+-|++++.++.+.-+ ..++.+-+.++
T Consensus 27 ~p~qQ~lGtT~GALifaiiv~~~---~~p~~T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~ 103 (288)
T COG4975 27 KPYQQTLGTTLGALIFAIIVFLF---VSPELTLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLF 103 (288)
T ss_pred ChhHhhhhccHHHHHHHHHHhee---ecCccchhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceee
Confidence 46666544333333333333332 223456666666777788888999999999999998886654 46778889999
Q ss_pred HHHHhCcccChhhH----HHHHHHHHHHHhhhcCcc--------cccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhH
Q 015159 216 SQFILGQQLPLTLW----LSLAPVVIGVSMASLTEL--------SFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNI 283 (412)
Q Consensus 216 s~~~l~er~~~~~~----l~l~l~~~Gv~l~~~~~~--------~~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~ 283 (412)
+.+.++|-.+..+. +++++.+.|+.+-++.|. ++.-.|+...+.|.+.|..|.+..+-.. .|.+..
T Consensus 104 gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v~g~sa 181 (288)
T COG4975 104 GVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--VDGLSA 181 (288)
T ss_pred eEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeecccc--ccchhh
Confidence 99999997666553 678888899998887653 2234788888899999999988877553 444444
Q ss_pred HHH---HHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHH
Q 015159 284 YAY---ISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVL 360 (412)
Q Consensus 284 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l 360 (412)
..- -++++.+.+ ....++....+ . .+.-+..|+.....|.+.+.+-++.+-.+.=...-+
T Consensus 182 iLPqAiGMv~~ali~---~~~~~~~~~~K-------------~-t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQl 244 (288)
T COG4975 182 ILPQAIGMVIGALIL---GFFKMEKRFNK-------------Y-TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQL 244 (288)
T ss_pred hhHHHHHHHHHHHHH---hhcccccchHH-------------H-HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhh
Confidence 333 333333322 22222222211 1 223344567677778777777777766554444556
Q ss_pred HHHHHHHHHHHHhCCccchhh----HHHHHHHHHHHHHHHH
Q 015159 361 KRVFVIGFSILAFGNKISTQT----GIGTVIAIAGVAAYSY 397 (412)
Q Consensus 361 ~~v~~ii~s~~~fge~~t~~~----~iG~~lvl~Gv~l~~~ 397 (412)
-.+.+.+-++++++|+-|..+ ++|.++++.|..+...
T Consensus 245 gViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 245 GVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred eeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 678888899999999988764 5678888887766543
No 73
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.30 E-value=0.0072 Score=58.63 Aligned_cols=71 Identities=18% Similarity=0.161 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 329 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 329 ~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
+..+++-...|++...+.++++.....+......++++++|+++++++.++.+++|++++++|+.+.....
T Consensus 83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 33477788889999999999999999999999999999999999999999999999999999999766544
No 74
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.23 E-value=0.01 Score=57.66 Aligned_cols=140 Identities=17% Similarity=0.103 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHH--HHHHHH-HhcchhhhhcchhhhHhhhchHHHHHH
Q 015159 251 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFV--CIPPAI-IVEGPQLIKHGLSDAISKVGMVKFISD 327 (412)
Q Consensus 251 ~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (412)
..|+++++++.+|++...+-+|| .++ -++|.. |- ..+.+. +.|+.. ....+. +.+.+.+.. ...+..
T Consensus 6 ~~G~~~~~i~~~~~GS~~~p~K~-~k~-w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~-----f~~~~~~~~-~~~~~~ 75 (345)
T PRK13499 6 ILGIIWHLIGGASSGSFYAPFKK-VKK-WSWETM-WS-VGGIFSWLILPWLIAALLLPD-----FWAYYSSFS-GSTLLP 75 (345)
T ss_pred HHHHHHHHHHHHHhhcccccccc-cCC-CchhHH-HH-HHHHHHHHHHHHHHHHHHhhh-----HHHHHHhcC-HHHHHH
Confidence 57999999999999999999988 344 334444 32 222211 112111 111111 222222222 334556
Q ss_pred HHHHHHHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHHhCCcc---c----hhhHHHHHHHHHHHHHHHHHH
Q 015159 328 LFWVGMFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKI---S----TQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 328 l~~~g~~~~~~~~~~~~~l~~~sa-~~~sv~~~l~~v~~ii~s~~~fge~~---t----~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
-+++|++-...|+..+..+++.+- .+..+..-+.-+.+.+++.+++||=. + ...++|.+++++|+.+..+.-
T Consensus 76 ~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag 155 (345)
T PRK13499 76 VFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAG 155 (345)
T ss_pred HHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 666788888888888888888865 44566667888899999999998532 2 357899999999999998844
Q ss_pred H
Q 015159 400 A 400 (412)
Q Consensus 400 ~ 400 (412)
.
T Consensus 156 ~ 156 (345)
T PRK13499 156 Q 156 (345)
T ss_pred h
Confidence 3
No 75
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.20 E-value=0.0067 Score=56.74 Aligned_cols=101 Identities=16% Similarity=0.146 Sum_probs=70.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHH
Q 015159 137 YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAAS 216 (412)
Q Consensus 137 ~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls 216 (412)
.|+...+-|.+...+...++.... ++...+|+.++ -++.|+++..++.++..|.+...++..-.+.++.++...+.+
T Consensus 163 ~~~~~~lPqaiGm~i~a~i~~~~~--~~~~~~k~~~~-nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgG 239 (269)
T PF06800_consen 163 SGWSAFLPQAIGMLIGAFIFNLFS--KKPFFEKKSWK-NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGG 239 (269)
T ss_pred ChhHhHHHHHHHHHHHHHHHhhcc--cccccccchHH-hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhh
Confidence 366665555443333333333322 22223444443 466799999999999999999999999999999999999999
Q ss_pred HHHhCcccChhhHH----HHHHHHHHHH
Q 015159 217 QFILGQQLPLTLWL----SLAPVVIGVS 240 (412)
Q Consensus 217 ~~~l~er~~~~~~l----~l~l~~~Gv~ 240 (412)
.+++||+-+++++. +++++++|.+
T Consensus 240 I~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 240 IFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred heEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 99999998888764 4444444443
No 76
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.18 E-value=0.015 Score=49.12 Aligned_cols=130 Identities=11% Similarity=0.124 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCC-hhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 254 FISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 254 ~~l~l~s~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
.++++++.++-+.+..+.-++.++.+ ++.-.......+++.+..+....+.++... .... ..| ....|
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~--------~~~~-p~w--~~lGG 71 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLAS--------LSSV-PWW--AYLGG 71 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccch--------hccC-ChH--HhccH
Confidence 46778888888888888888877776 999999999999998888777766542110 0111 112 33367
Q ss_pred HHHHHHHHHHHHHhhccchhHHHHHHHHH-HHHHHHHHHH-Hh---CCccchhhHHHHHHHHHHHHH
Q 015159 333 MFYHLYNQLATNTLERVAPLTHAVGNVLK-RVFVIGFSIL-AF---GNKISTQTGIGTVIAIAGVAA 394 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa~~~sv~~~l~-~v~~ii~s~~-~f---ge~~t~~~~iG~~lvl~Gv~l 394 (412)
+++..+-......+.+.++.........- -+.+++++.+ +| ++++++.+++|.+++++|+.+
T Consensus 72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77777777777888999998876655544 4456777775 34 477999999999999999863
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.14 E-value=0.0049 Score=50.51 Aligned_cols=57 Identities=19% Similarity=0.220 Sum_probs=46.7
Q ss_pred HHHhhccchh-HHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 343 TNTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 343 ~~~l~~~sa~-~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
..++++.+-. .+++..-+..+.+.+.++++|||++|+.+++|+.++++|+...+...
T Consensus 48 s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 48 SFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 3556666553 34666667888999999999999999999999999999999887654
No 78
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.04 E-value=0.028 Score=45.23 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=46.0
Q ss_pred HHHhhccchh-HHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 343 TNTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 343 ~~~l~~~sa~-~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
..++++.+.. .+++-.-+..+.+.+.++++|||++++.+++|+.+++.|+...+
T Consensus 53 s~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 53 SQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 3666777654 45788888889999999999999999999999999999998754
No 79
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.95 E-value=0.035 Score=46.85 Aligned_cols=118 Identities=14% Similarity=0.098 Sum_probs=83.4
Q ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHH
Q 015159 124 FNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHT 203 (412)
Q Consensus 124 ~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~i 203 (412)
...+|-.+-+....|+.-+++.+.++.+.+.+++...+++..+..++.-++....|++......+..+....+.++.+..
T Consensus 16 q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~ 95 (138)
T PF04657_consen 16 QAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYLGGLLGVFFVLSNIILVPRLGAALTTI 95 (138)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhccHHHHHHHHHHHHHHhhhhhHHHHHH
Confidence 33455555554446999999999999888776555433322111112223455588999999999999999988877665
Q ss_pred HH-hhhHHHHHHHHHH----HhCcccChhhHHHHHHHHHHHHh
Q 015159 204 IK-ALEPFFNAAASQF----ILGQQLPLTLWLSLAPVVIGVSM 241 (412)
Q Consensus 204 i~-~~~Pvf~~lls~~----~l~er~~~~~~l~l~l~~~Gv~l 241 (412)
+. .-+-+..++++.+ ..++++++.++++++++++|+.+
T Consensus 96 l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 96 LIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 54 5567777788875 35678999999999999999864
No 80
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=96.92 E-value=0.0025 Score=59.26 Aligned_cols=76 Identities=24% Similarity=0.293 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHHh
Q 015159 326 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 326 ~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
..+..-++++.+.|...+..+++.+|.+..+....|.+++.++++++++++++..||++..+.+.|+.+.......
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~ 93 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ 93 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence 3444557778888999999999999999999999999999999999999999999999999999999998766543
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.76 E-value=0.017 Score=46.62 Aligned_cols=57 Identities=21% Similarity=0.233 Sum_probs=47.3
Q ss_pred HHHhhccchhH-HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 343 TNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 343 ~~~l~~~sa~~-~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
..++++.+-.. +++-.-+..+.+.+.++++|||++|+.+++|+.++++|+...+...
T Consensus 48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 36667776543 5666667888999999999999999999999999999999986543
No 82
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.56 E-value=0.021 Score=44.71 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHH
Q 015159 176 IPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPV 235 (412)
Q Consensus 176 ~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~ 235 (412)
.....++..+..+...+++++|.+.+.-+ .....+.+.+.+.+++||+++..+++++.++
T Consensus 33 ~~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 33 ILAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp -HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33344677888899999999999997554 5699999999999999999999999998764
No 83
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.077 Score=49.92 Aligned_cols=134 Identities=11% Similarity=0.133 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC-ChHHHHHHHHHHHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHHHHHH
Q 015159 109 VTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIHLLVGVVYCLVSWAVGLPKR-----APIDSKLLKLLIPVAVCH 182 (412)
Q Consensus 109 ~~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~ 182 (412)
....+++.+.++=...+-.++.++..+. .++.+.+.-.++..+...........-. ....++.++.+++.+++.
T Consensus 172 ~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~g 251 (327)
T KOG1581|consen 172 IGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCG 251 (327)
T ss_pred HhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhh
Confidence 3444555555544445556677776544 3455555555555555544433211111 123456788899999999
Q ss_pred HHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 183 ALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 183 ~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
+.++.+-++-++.-..-+.++|..+.=++.++++.+.++.+.++.+|+++.+++.|+.+=
T Consensus 252 avGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 252 AVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred hhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 999999999998877778888999999999999999999999999999999999988753
No 84
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.41 E-value=0.04 Score=50.36 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHh
Q 015159 175 LIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSM 241 (412)
Q Consensus 175 ~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l 241 (412)
.....++...+..+..+.++|.+.....++..+.++++.+++.++++|+++..+|+|..+++.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3444566677778899999999999999999999999999999999999999999999999998754
No 85
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.39 E-value=0.0034 Score=58.30 Aligned_cols=132 Identities=15% Similarity=0.152 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
|++.+++|.++++...+=.||. +..|++-..++++....+......++.+.+.+ +...++.|
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f-----------------~p~amlgG 62 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DTGDGFFFQWVMCSGIFLVGLVVNLILGFPPF-----------------YPWAMLGG 62 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cCCCcHHHHHHHHHHHHHHHHHHHHhcCCCcc-----------------eeHHHhhh
Confidence 6788899999999998888877 45588777777666666555555444444332 22333445
Q ss_pred HHHHHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHH-HhCCc-----cchhhHHHHHHHHHHHHHHHHHHHhH
Q 015159 333 MFYHLYNQLATNTLERVAP-LTHAVGNVLKRVFVIGFSIL-AFGNK-----ISTQTGIGTVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa-~~~sv~~~l~~v~~ii~s~~-~fge~-----~t~~~~iG~~lvl~Gv~l~~~~~~~~ 402 (412)
.+....|.+..-.++.++- +-..+-+..+-+.+...+-+ +||++ -.+.+++|++++++|..+|...|..+
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 5555555555555555543 23344555566666666644 66643 35789999999999999998876544
No 86
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.39 E-value=0.044 Score=43.87 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=46.9
Q ss_pred HHHhhccch-hHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 343 TNTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 343 ~~~l~~~sa-~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
..++++.+- +.+++-.-+..+.+.+.++++|||++++.+++|+.++++|+..-+.
T Consensus 47 s~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 47 AWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 356677765 4468888889999999999999999999999999999999987653
No 87
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=96.35 E-value=0.0046 Score=56.84 Aligned_cols=77 Identities=13% Similarity=0.136 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 166 PIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 166 ~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
|..++++..++-+|+++++++.+...++|---++-.++++.+..+|..+...+++++-++++.|.|.++++...+.+
T Consensus 247 P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~ 323 (346)
T KOG4510|consen 247 PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWV 323 (346)
T ss_pred CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHH
Confidence 34556666778889999999999999999999999999999999999999999999999999999988776665544
No 88
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.24 E-value=0.037 Score=44.01 Aligned_cols=55 Identities=20% Similarity=0.208 Sum_probs=47.3
Q ss_pred HHhhccch-hHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 344 NTLERVAP-LTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 344 ~~l~~~sa-~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
.++|+.+- +.+++-.-+-.+.+.+.++++|||++++.+++|..++++|+..-+..
T Consensus 49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~ 104 (106)
T COG2076 49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG 104 (106)
T ss_pred HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence 56677765 44688888889999999999999999999999999999999987653
No 89
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.07 E-value=0.066 Score=51.42 Aligned_cols=117 Identities=17% Similarity=0.143 Sum_probs=78.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHH
Q 015159 250 NWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (412)
Q Consensus 250 ~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (412)
...|..+++.++++.+...+++||...+.+....- +.... . +....+.+|..++
T Consensus 5 ~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~------------------~~~~~-~-------~~l~~~~W~~G~~ 58 (300)
T PF05653_consen 5 FYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLR------------------AGSGG-R-------SYLRRPLWWIGLL 58 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc------------------ccchh-h-------HHHhhHHHHHHHH
Confidence 46799999999999999999999865332110000 00000 0 0001112233332
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 330 WVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 330 ~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
..+ .+. ...+.++...++...+..+.+.-+++.+++..+++|+++..+++|..+++.|..+..
T Consensus 59 ~~~-~g~---~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 59 LMV-LGE---ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HHh-cch---HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 222 222 333445577788888888899999999999999999999999999999999998643
No 90
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=95.70 E-value=0.044 Score=52.70 Aligned_cols=137 Identities=13% Similarity=0.076 Sum_probs=102.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhh--CC-ChHHHHHHHHHHHHHHHH-HHHHhCCCCCC------CCCHHHHHHHH
Q 015159 107 ALVTGFFFFMWYFLNVIFNILNKRIYNY--FP-YPYFVSVIHLLVGVVYCL-VSWAVGLPKRA------PIDSKLLKLLI 176 (412)
Q Consensus 107 ~l~~~~~~~~w~~~~~~~~~~~K~~~~~--f~-~P~~l~~~r~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~ 176 (412)
.+......+.+.+....-+++.|.+++. .+ ++..+...+--++.+.++ +++....+... ..+.+ ...++
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 4556666777777777888888888852 11 377777777667776666 55443222221 22223 33344
Q ss_pred HHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 177 PVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 177 ~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
..+++..+.+...++.+..+++-++++.....=+++...++++++++.++.+.+|.++.++|+.+...
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 55577778889999999999999999999999999999999999999999999999999999998764
No 91
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.63 E-value=0.43 Score=40.56 Aligned_cols=138 Identities=7% Similarity=0.053 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC-hhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHH
Q 015159 251 WTGFISAMISNISFTYRSIYSKKAMTDMD-STNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (412)
Q Consensus 251 ~~G~~l~l~s~l~~a~~~v~~kk~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (412)
+...++++++.++-..++-..-++.+..+ |..-.......|++.+..+....+...... . ....+ |+ ..
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-----~--~~~~p--wW-~~ 73 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLA-----A--VASAP--WW-AW 73 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-----h--ccCCc--hH-HH
Confidence 45677788888888888887777766555 666677777778877777666644322111 0 01111 22 22
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHHhC----CccchhhHHHHHHHHHHHHHHHHH
Q 015159 330 WVGMFYHLYNQLATNTLERVAPLTHAVG-NVLKRVFVIGFSILAFG----NKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 330 ~~g~~~~~~~~~~~~~l~~~sa~~~sv~-~~l~~v~~ii~s~~~fg----e~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
..|+++..+-........+.++.+.... -.-+-+.+++++.+=+. .++++..++|.+++++|+++.+..
T Consensus 74 ~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 74 IGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred HccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 3356565555555566688887766443 33444556666655443 579999999999999996665543
No 92
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=95.62 E-value=0.86 Score=44.03 Aligned_cols=117 Identities=23% Similarity=0.225 Sum_probs=83.5
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHhcch---hhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhccchhH
Q 015159 277 DMDSTNIYAYISIIALFVCIPPAIIVEGP---QLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYNQLATNTLERVAPLT 353 (412)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~l~~~sa~~ 353 (412)
++.+....+..-++-.+++....+.-+.. +... +..+. ....+.-...+..-++++.+-|...|..+.+.+|.+
T Consensus 44 ~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~-~l~~~--i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaat 120 (345)
T KOG2234|consen 44 MFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLK-SLSKE--ILAAPRETLKVSVPALIYALQNNLQYVALSNLDAAT 120 (345)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhh-hcCHH--HHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchh
Confidence 35677788888888888777665543321 1110 11110 011110112233335566666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 354 ~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
+.+...+|...+.+++++++++++++.||....+.++|+.+.+
T Consensus 121 yqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 121 YQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999988
No 93
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.58 E-value=0.6 Score=39.68 Aligned_cols=121 Identities=17% Similarity=0.156 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 015159 122 VIFNILNKRIYNYFPYPYFVSVIHLLVGVVYCLVSWAVGLPKRAPID--SKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 122 ~~~~~~~K~~~~~f~~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s 199 (412)
...+-.|-.+-+....|+.-+++.+.++.+++....... .+.+... ++.-++....|++.......+......+.++
T Consensus 18 ~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~-~~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~l~p~lGa~ 96 (150)
T COG3238 18 PLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIK-QGHPGLAAVASAPWWAWIGGLLGAIFVTSSILLAPRLGAA 96 (150)
T ss_pred hhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh-cCCCchhhccCCchHHHHccchhhhhhhhhHHhccchhHH
Confidence 344455666655566799999999999988876544442 2222221 2222334555666665555555555555554
Q ss_pred H-HHHHHhhhHHHHHHHHHHHhC----cccChhhHHHHHHHHHHHHhhh
Q 015159 200 F-THTIKALEPFFNAAASQFILG----QQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 200 ~-~~ii~~~~Pvf~~lls~~~l~----er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
. ..++-+.+-+..+++..+=.. ++++..++++++++++|+.++.
T Consensus 97 ~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 97 TTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 555667777788888766543 6889999999999999965543
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.51 E-value=0.033 Score=45.02 Aligned_cols=69 Identities=22% Similarity=0.375 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhccchHHHHHH-HhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 173 KLLIPVAVCHALGHVTSNVSFAAVAVSFTHTI-KALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 173 ~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii-~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
++.++ -+++-.+.+.+++.+...+.+.+.-+ .++.=+||++.++++.+|..+++.++|+.++++|+.+.
T Consensus 43 ~y~ip-f~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIP-FLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHH-HHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 33443 34555677888999999999998877 59999999999988888888999999999999999763
No 95
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.28 E-value=0.26 Score=38.50 Aligned_cols=48 Identities=21% Similarity=0.174 Sum_probs=26.1
Q ss_pred HHHHHhhccchhH-HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHH
Q 015159 341 LATNTLERVAPLT-HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIA 388 (412)
Q Consensus 341 ~~~~~l~~~sa~~-~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lv 388 (412)
+..+++++.+... +.+..-+..+.+.+.++++|||++|+.+++|+.++
T Consensus 45 ~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 45 FLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3346677766544 46666678889999999999999999999999875
No 96
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.17 E-value=0.91 Score=43.78 Aligned_cols=145 Identities=14% Similarity=0.114 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHH-HHhcchhhhhcchhhhHhhhchHHHHHHHH
Q 015159 251 WTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA-IIVEGPQLIKHGLSDAISKVGMVKFISDLF 329 (412)
Q Consensus 251 ~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 329 (412)
..|+++..++.+|.+.+.+-.||. ++.+--+.-..+.+++-+ .+|.. ....-|+. .+.+....... +...+
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv-k~WsWEs~Wlv~gi~swl-i~P~~~a~l~ip~~-----~~i~~~~~~~~-l~~~~ 77 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV-KGWSWESYWLVQGIFSWL-IVPWLWALLAIPDF-----FSIYSATPAST-LFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc-CCccHHHHHHHHHHHHHH-HHHHHHHHHhCCcH-----HHHHHhCChhH-HHHHH
Confidence 579999999999999999888887 444333333334444443 33332 22233332 22222222222 22223
Q ss_pred HHHHHHHHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHHhC-------CccchhhHHHHHHHHHHHHHHHHHHHh
Q 015159 330 WVGMFYHLYNQLATNTLERVA-PLTHAVGNVLKRVFVIGFSILAFG-------NKISTQTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 330 ~~g~~~~~~~~~~~~~l~~~s-a~~~sv~~~l~~v~~ii~s~~~fg-------e~~t~~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
+.|++--..+...=..+++.+ ++..++.--+..++..++--++.| ++-....++|.+++++|+.+..+....
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence 333332222222223444443 233344433444444444444433 233457899999999999999877544
Q ss_pred HH
Q 015159 402 ME 403 (412)
Q Consensus 402 ~~ 403 (412)
++
T Consensus 158 Ke 159 (344)
T PF06379_consen 158 KE 159 (344)
T ss_pred hh
Confidence 33
No 97
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=93.35 E-value=0.49 Score=38.28 Aligned_cols=52 Identities=27% Similarity=0.185 Sum_probs=40.3
Q ss_pred HHHhhccchh-HHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHH
Q 015159 343 TNTLERVAPL-THAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (412)
Q Consensus 343 ~~~l~~~sa~-~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l 394 (412)
+..+++.+-. ..-+.|.+.-+++.+.++++.+|..+...++|+++++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 3445555433 334557888899999998888888899999999999999864
No 98
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=91.40 E-value=0.13 Score=49.75 Aligned_cols=75 Identities=11% Similarity=0.111 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 326 SDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 326 ~~l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
...+..+.+-++.|+....+++.++.....++....-.++..++.++-+|++|+..+++..+.++|+++.+..+.
T Consensus 160 k~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s 234 (416)
T KOG2765|consen 160 KLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDS 234 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccc
Confidence 344555777778888888999999999999999999999999999999999999999999999999987765543
No 99
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=90.68 E-value=0.41 Score=43.45 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=63.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 171 LLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 171 ~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
.+..+.+++++..+++.+.+.-..+-++-+-+++..+.-+|+.+.+.++++..++.++|++.++++.|...=
T Consensus 240 ~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 240 VFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 456678889999999999998888877777788888999999999999999999999999999999987653
No 100
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=89.10 E-value=0.19 Score=44.28 Aligned_cols=62 Identities=18% Similarity=0.300 Sum_probs=54.6
Q ss_pred HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHHH
Q 015159 338 YNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 338 ~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
.|+....++++.+|...+-....+..+..+++++++||++....++..++.+.|+....+..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 36666788899999999999999999999999999999999999999999999988665444
No 101
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=87.94 E-value=0.13 Score=46.91 Aligned_cols=135 Identities=12% Similarity=0.133 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDLFWVG 332 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 332 (412)
+++.+++=++.|+.--....|... +|.+.+.=+.+-++++.+ ..+++..|... ...+..-+.+|
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~GG--~p~qQ~lGtT~GALifai-iv~~~~~p~~T-------------~~~~iv~~isG 66 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFGG--KPYQQTLGTTLGALIFAI-IVFLFVSPELT-------------LTIFIVGFISG 66 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecCC--ChhHhhhhccHHHHHHHH-HHheeecCccc-------------hhhHHHHHHhh
Confidence 467788888888877666655532 333333333333333333 33322322221 12244455567
Q ss_pred HHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHHhCCccchhhH----HHHHHHHHHHHHHHHHHHhHH
Q 015159 333 MFYHLYNQLATNTLERVAPLTHAV-GNVLKRVFVIGFSILAFGNKISTQTG----IGTVIAIAGVAAYSYIKAQME 403 (412)
Q Consensus 333 ~~~~~~~~~~~~~l~~~sa~~~sv-~~~l~~v~~ii~s~~~fge~~t~~~~----iG~~lvl~Gv~l~~~~~~~~~ 403 (412)
.+-.+.|...+++.+..+...+.. .+-++-+-+.++++++|+|--+..+. +..++++.|+++.++.++.++
T Consensus 67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk 142 (288)
T COG4975 67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNK 142 (288)
T ss_pred hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccc
Confidence 777788888888888876655543 44577888999999999998777653 456778888888777665333
No 102
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=84.06 E-value=9 Score=30.37 Aligned_cols=29 Identities=14% Similarity=0.134 Sum_probs=25.7
Q ss_pred HHHHHHHhCCccchhhHHHHHHHHHHHHH
Q 015159 366 IGFSILAFGNKISTQTGIGTVIAIAGVAA 394 (412)
Q Consensus 366 ii~s~~~fge~~t~~~~iG~~lvl~Gv~l 394 (412)
..+++++++|++++.++.|.++++++++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 55889999999999999999999888754
No 103
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.83 E-value=19 Score=28.15 Aligned_cols=39 Identities=10% Similarity=0.140 Sum_probs=30.7
Q ss_pred HHHHHHHHH----HHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 357 GNVLKRVFV----IGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 357 ~~~l~~v~~----ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
...++.+.+ ..+|+++++|++.|.++.|..++.+|+.+.
T Consensus 71 LK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 71 LKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 344455444 448999999999999999999999998764
No 104
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=81.86 E-value=8.4 Score=36.04 Aligned_cols=121 Identities=12% Similarity=0.078 Sum_probs=79.2
Q ss_pred HHHHHHhhCCCh-HHHHHHHHHHHHHHHHHHH-HhCCCC--C---CCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchH
Q 015159 127 LNKRIYNYFPYP-YFVSVIHLLVGVVYCLVSW-AVGLPK--R---APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVS 199 (412)
Q Consensus 127 ~~K~~~~~f~~P-~~l~~~r~~~~~~~~~~~~-~~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s 199 (412)
++++.++.++.+ ..+.+....++.++++... ..+.-- . ..-+.+.....++.++...++..+...=.+.-.+.
T Consensus 208 vQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLalI~~fGA~ 287 (367)
T KOG1582|consen 208 VQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLALIKLFGAL 287 (367)
T ss_pred HHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHHHHHhchh
Confidence 456666655533 4555555555655544322 222110 0 11234455666777776666665554444556777
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcc
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTEL 247 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~ 247 (412)
.+.++....=-.+.+++++++.+.++....-+..+++.|+.+=.+.+.
T Consensus 288 ~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~ 335 (367)
T KOG1582|consen 288 IAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKR 335 (367)
T ss_pred HHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCC
Confidence 788888888889999999999999999999999999999998766553
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=81.52 E-value=35 Score=31.16 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh-CCCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHH
Q 015159 138 PYFVSVIHLLVGVVYCLVSWAV-GLPKR----APIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFN 212 (412)
Q Consensus 138 P~~l~~~r~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~ 212 (412)
-+...+..-+.+.-+++.+-.. ..+.. ..++.+.+..+++-|++...-.++.-|.++-++..++.++.++.-...
T Consensus 185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~ 264 (309)
T COG5070 185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI 264 (309)
T ss_pred hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence 3555666666665555443322 21111 123345566778888888888889999999999999999999999999
Q ss_pred HHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 213 AAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 213 ~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
++.+.+++++..+...+.+++++++..++.
T Consensus 265 alaGlvffdap~nf~si~sillGflsg~iY 294 (309)
T COG5070 265 ALAGLVFFDAPVNFLSIFSILLGFLSGAIY 294 (309)
T ss_pred HHhhhhhcCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888766655443
No 106
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.01 E-value=1.6 Score=41.63 Aligned_cols=119 Identities=14% Similarity=0.095 Sum_probs=77.7
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHhcchhhhhcchhhhHhhhchHHHHHHH
Q 015159 249 FNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPAIIVEGPQLIKHGLSDAISKVGMVKFISDL 328 (412)
Q Consensus 249 ~~~~G~~l~l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (412)
.+..|.++++.+.++.+...++.||...+...... =..+++ .. ..-.+.+|..+
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~~----------------ra~~gg------~~----yl~~~~Ww~G~ 71 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASGL----------------RAGEGG------YG----YLKEPLWWAGM 71 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhcc----------------cccCCC------cc----hhhhHHHHHHH
Confidence 45689999999999999988888886544221000 000110 00 00011223223
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHH
Q 015159 329 FWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSY 397 (412)
Q Consensus 329 ~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~ 397 (412)
+..+ .+=..|+..| ...++.-.+..+.+..+...+++.++++|++++...+|++++++|..+...
T Consensus 72 ltm~-vGei~NFaAY---aFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~ 136 (335)
T KOG2922|consen 72 LTMI-VGEIANFAAY---AFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI 136 (335)
T ss_pred HHHH-HHhHhhHHHH---hhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence 2222 2334454444 667777788888899999999999999999999999999999999875543
No 107
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=72.39 E-value=9.4 Score=35.93 Aligned_cols=55 Identities=16% Similarity=0.147 Sum_probs=45.8
Q ss_pred HHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 341 LATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 341 ~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
..|..+..+++..+.+..-...+++-++|.-+++.+++..||+|+..+..|+...
T Consensus 102 lm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 102 LMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred HHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 3344456667777777777778899999999999999999999999999999854
No 108
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=66.67 E-value=1.3e+02 Score=29.05 Aligned_cols=131 Identities=16% Similarity=0.130 Sum_probs=83.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-hh--hHHHHHHHHHHHHHHHHHHH--hcchhhhhcchhhhHhhhchHHHHHH
Q 015159 253 GFISAMISNISFTYRSIYSKKAMTDMD-ST--NIYAYISIIALFVCIPPAII--VEGPQLIKHGLSDAISKVGMVKFISD 327 (412)
Q Consensus 253 G~~l~l~s~l~~a~~~v~~kk~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (412)
....++.-+++.-+-.+.-|-...+++ |. .++.+|++.+.+.....-.. .+.+.+ ++.. ..-|.
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l---~~~~-------~kk~~- 81 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPL---DLRT-------AKKWF- 81 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCc---ChHH-------HHHHc-
Confidence 344555555566666666676665544 22 44558888887766544322 111111 1110 11111
Q ss_pred HHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHH
Q 015159 328 LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 328 l~~~g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
-..++.++..+...+.+++.+--...+.....++++.+...++||.+++...+.....+++|...+.
T Consensus 82 --P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 82 --PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred --cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 1122222223344577899999999999999999999999999999999999999999999988653
No 109
>PRK02237 hypothetical protein; Provisional
Probab=66.26 E-value=11 Score=30.05 Aligned_cols=39 Identities=10% Similarity=0.030 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 207 ~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
...+...+..+.+-|+|++.++++|..++++|+.++...
T Consensus 68 vyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 68 VYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 334455677888899999999999999999999887543
No 110
>PRK02237 hypothetical protein; Provisional
Probab=64.89 E-value=12 Score=29.85 Aligned_cols=45 Identities=18% Similarity=0.098 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 354 ~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
++.++-+-.+.+++..+.+-|++++...++|..++++|+.+..+.
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 456666777888999999999999999999999999999876543
No 111
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=64.19 E-value=11 Score=30.03 Aligned_cols=39 Identities=13% Similarity=0.129 Sum_probs=32.5
Q ss_pred hhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 207 LEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 207 ~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
...+...+..+.+-|+|+++++++|..++++|+.++...
T Consensus 66 vfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 66 VFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 344556677788899999999999999999999987654
No 112
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=62.49 E-value=54 Score=31.00 Aligned_cols=45 Identities=18% Similarity=0.200 Sum_probs=37.7
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhc
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
+.+++..+.=++..+++.+.++..++++.|+|..++++|..+...
T Consensus 270 TVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~ 314 (330)
T KOG1583|consen 270 TVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFAN 314 (330)
T ss_pred EEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 344555666788889999999999999999999999999988753
No 113
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=61.04 E-value=4.4 Score=38.45 Aligned_cols=140 Identities=12% Similarity=0.047 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHH-HHhc--chh-hhhcchhhhHhhhchHHHHHHHHHHHH
Q 015159 258 MISNISFTYRSIYSKKAMTDMDSTNIYAYISIIALFVCIPPA-IIVE--GPQ-LIKHGLSDAISKVGMVKFISDLFWVGM 333 (412)
Q Consensus 258 l~s~l~~a~~~v~~kk~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~ 333 (412)
+++.+||+.+-..+|-..++-...+..+|=..++.++...+. +-++ ++. ....++.+.+.+..++. +...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~s-v~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPS-VLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHH-HHHHHHhhH
Confidence 456788887777666543332222334444455544443332 2221 110 11112222233444444 334555677
Q ss_pred HHHHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHHhCCccc--hhhHHHHHHHHHHHHHHHHHH
Q 015159 334 FYHLYNQLATNTLERVAPLTH-AVGNVLKRVFVIGFSILAFGNKIS--TQTGIGTVIAIAGVAAYSYIK 399 (412)
Q Consensus 334 ~~~~~~~~~~~~l~~~sa~~~-sv~~~l~~v~~ii~s~~~fge~~t--~~~~iG~~lvl~Gv~l~~~~~ 399 (412)
+..+.|+..-+++...+-... -+...+..++.+++-++ .+.+.+ ..-+.|.+++++.+.+-....
T Consensus 81 vfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~ah 148 (336)
T PF07168_consen 81 VFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAAH 148 (336)
T ss_pred hhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHHH
Confidence 777777666555554432211 11111222233333332 234444 356678888888887755433
No 114
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=60.44 E-value=1.7e+02 Score=28.52 Aligned_cols=226 Identities=15% Similarity=0.156 Sum_probs=122.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHH-HHHHhhhHHHHHHHHHHHhCc-------ccChhhHHHHHHHHHHH
Q 015159 168 DSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFT-HTIKALEPFFNAAASQFILGQ-------QLPLTLWLSLAPVVIGV 239 (412)
Q Consensus 168 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~-~ii~~~~Pvf~~lls~~~l~e-------r~~~~~~l~l~l~~~Gv 239 (412)
+.+.+....+.|++...+...+-.+.+|+.++.. .+...++-++-.++-.++.++ +-....++++++.++|+
T Consensus 69 ~~~~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGI 148 (344)
T PF06379_consen 69 PASTLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGI 148 (344)
T ss_pred ChhHHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHH
Confidence 4456667788888888888888889999777763 344455555555555555442 23356789999999999
Q ss_pred HhhhcC----c-------cccc-HHHHHHHHHHHHHHHHHHHHHHHhc--------CCCChhh----HHHHHHHHHHHHH
Q 015159 240 SMASLT----E-------LSFN-WTGFISAMISNISFTYRSIYSKKAM--------TDMDSTN----IYAYISIIALFVC 295 (412)
Q Consensus 240 ~l~~~~----~-------~~~~-~~G~~l~l~s~l~~a~~~v~~kk~~--------~~~~~~~----~~~~~~~~~~~~~ 295 (412)
++.... | .++| ..|++.++++.+..|..++=.+.-. ...+++. .......-+.+.-
T Consensus 149 ai~g~AG~~Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN 228 (344)
T PF06379_consen 149 AICGKAGSMKEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITN 228 (344)
T ss_pred HHHhHHHHhhhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHH
Confidence 987641 1 1233 4899999999999888877443221 1233331 1112222233333
Q ss_pred HHHHHHhc-chhhhhcchhhhHhhhchHHHHHHHHHHHHHHHHHH-HHHHHHh--hc----cchhHHHHHHHHHHHHHHH
Q 015159 296 IPPAIIVE-GPQLIKHGLSDAISKVGMVKFISDLFWVGMFYHLYN-QLATNTL--ER----VAPLTHAVGNVLKRVFVIG 367 (412)
Q Consensus 296 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-~~~~~~l--~~----~sa~~~sv~~~l~~v~~ii 367 (412)
+...++.. ..+-. +...|. ....+.+....+++.+.+.++. ++.++.. .+ .+.....+.+.+..+++-+
T Consensus 229 ~~yc~~~l~~~k~~-s~~~d~--~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snv 305 (344)
T PF06379_consen 229 LIYCLILLAKNKNW-SWKGDY--SVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNV 305 (344)
T ss_pred HHHHHHHHhhcCCC-cccccc--ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHH
Confidence 33333321 00000 000110 0011112223333333333321 2222222 22 3355667777777788888
Q ss_pred HHHHHh-----CCccchhhHHHHHHHHHHHHHHH
Q 015159 368 FSILAF-----GNKISTQTGIGTVIAIAGVAAYS 396 (412)
Q Consensus 368 ~s~~~f-----ge~~t~~~~iG~~lvl~Gv~l~~ 396 (412)
.+.+.- +++.-..-++|.++++.++.+..
T Consensus 306 wGl~lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG 339 (344)
T PF06379_consen 306 WGLILKEWKGASKKTIRVLVLGIAVLILSVVIVG 339 (344)
T ss_pred HHHHHHHhccCCcccHHHHHHHHHHHHHHHHHHh
Confidence 876543 12333456788888888877654
No 115
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=59.72 E-value=13 Score=29.60 Aligned_cols=45 Identities=22% Similarity=0.148 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHHHHH
Q 015159 354 HAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAYSYI 398 (412)
Q Consensus 354 ~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~~~~ 398 (412)
++.++-+-.+.+++..+.+-|++++...++|..++++|+.+..+.
T Consensus 60 YAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 60 YAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456666778889999999999999999999999999999876543
No 116
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=54.73 E-value=3 Score=38.59 Aligned_cols=64 Identities=14% Similarity=0.075 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHhCCccchhhHHHHHHHHHHHHHH
Q 015159 332 GMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSILAFGNKISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 332 g~~~~~~~~~~~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~fge~~t~~~~iG~~lvl~Gv~l~ 395 (412)
++.-.-.|++..++.++++-........-..++..+++|++++.+-.+.++.|.++.+.|+...
T Consensus 85 a~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvmv 148 (336)
T KOG2766|consen 85 AFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMV 148 (336)
T ss_pred eEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEE
Confidence 3333344555567778888888899999999999999999999999999999999999998743
No 117
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=54.65 E-value=1.1e+02 Score=24.41 Aligned_cols=52 Identities=15% Similarity=0.230 Sum_probs=33.6
Q ss_pred hhhhccchHHHHHHH-hhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 191 VSFAAVAVSFTHTIK-ALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 191 ~al~~~s~s~~~ii~-~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
++.+..+.+.-.++. ..+...-+.++.+++||++++....+-++.++++.++
T Consensus 54 iG~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 54 IGYQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 444444444333333 2223344567788999999999999998888777653
No 118
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=54.06 E-value=27 Score=22.94 Aligned_cols=11 Identities=36% Similarity=0.631 Sum_probs=6.4
Q ss_pred HHHHHHHHHHH
Q 015159 390 AGVAAYSYIKA 400 (412)
Q Consensus 390 ~Gv~l~~~~~~ 400 (412)
.|..+|+..+.
T Consensus 21 iGl~IyQkikq 31 (49)
T PF11044_consen 21 IGLSIYQKIKQ 31 (49)
T ss_pred HHHHHHHHHHH
Confidence 55566765543
No 119
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=52.48 E-value=24 Score=27.97 Aligned_cols=68 Identities=18% Similarity=0.211 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccchHHHH-HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTH-TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~al~~~s~s~~~-ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
++.|.. ++-.+..++++-+++.+.+.+. +-.++.-.|+.+++..+.-|....+.++|..++++|+.+.
T Consensus 55 Y~iPFl-lNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 55 YLIPFL-LNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHH-HHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 334433 3444566778888887777654 4456677888888876655666777889999999998764
No 120
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=51.71 E-value=3e+02 Score=28.65 Aligned_cols=26 Identities=19% Similarity=-0.032 Sum_probs=12.3
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHH
Q 015159 347 ERVAPLTHAVGNVLKRVFVIGFSILA 372 (412)
Q Consensus 347 ~~~sa~~~sv~~~l~~v~~ii~s~~~ 372 (412)
.|+.++...+.....++-..+.|.+.
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444555555555543
No 121
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=48.02 E-value=20 Score=28.41 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcC
Q 015159 209 PFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLT 245 (412)
Q Consensus 209 Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~ 245 (412)
.+...+..++.-|+++++++|+|.++.++|+.++..+
T Consensus 69 I~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 69 IAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred HHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 3445566677889999999999999999998877654
No 122
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=46.59 E-value=2.8e+02 Score=26.78 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=39.2
Q ss_pred hhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhh
Q 015159 193 FAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMA 242 (412)
Q Consensus 193 l~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~ 242 (412)
+..++.-+-++..--.-+.+.+++..+.+++++...|+|+.+...|+..-
T Consensus 264 l~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 264 LSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred eeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 34455555555555566778888899999999999999999999999876
No 123
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=45.13 E-value=4.6e+02 Score=28.85 Aligned_cols=44 Identities=16% Similarity=0.165 Sum_probs=32.3
Q ss_pred HHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhh
Q 015159 200 FTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
-+.++..+.|+-.+.++.+...+|.+...+.+.+..++|.+.+.
T Consensus 12 Ra~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~~ 55 (764)
T TIGR02865 12 RAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISIQ 55 (764)
T ss_pred HHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHhC
Confidence 45677888999999999888777765555667766777766443
No 124
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=42.65 E-value=1.6e+02 Score=22.88 Aligned_cols=63 Identities=10% Similarity=0.133 Sum_probs=35.8
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHH---hCCc-cchhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 015159 344 NTLERVAPLTHAVGNVLKRVFVIGFSILA---FGNK-ISTQTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (412)
Q Consensus 344 ~~l~~~sa~~~sv~~~l~~v~~ii~s~~~---fge~-~t~~~~iG~~lvl~Gv~l~~~~~~~~~~~~ 406 (412)
.+++++.-+..-....+.-++.++++.+. .++. +-...|.|...=+++..++....++.++..
T Consensus 23 q~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~~~~~ 89 (93)
T PF06946_consen 23 QAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRSKKYG 89 (93)
T ss_pred HHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhhhhcC
Confidence 44566554444444445555666665442 2322 333458888888888888877666544433
No 125
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=41.97 E-value=3e+02 Score=25.77 Aligned_cols=102 Identities=15% Similarity=0.083 Sum_probs=65.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHH
Q 015159 137 YPYFVSVIHLLVGVVYCLVSWAVGLPKRAPIDSKLLKLLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAAS 216 (412)
Q Consensus 137 ~P~~l~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls 216 (412)
+++++-+..+....+..++....... +++ ...-.+.|.+.+.++.+..-.++.+..+....+=++.-+.+--..
T Consensus 26 Dg~~fQw~~~~~i~~~g~~v~~~~~~--p~f----~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~ 99 (254)
T PF07857_consen 26 DGFFFQWVMCSGIFLVGLVVNLILGF--PPF----YPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWAS 99 (254)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhcCC--Ccc----eeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 46666666655554444433332211 122 122466678888899999999999999999998888665555443
Q ss_pred HH--HhC---c--ccChhhHHHHHHHHHHHHhhhc
Q 015159 217 QF--ILG---Q--QLPLTLWLSLAPVVIGVSMASL 244 (412)
Q Consensus 217 ~~--~l~---e--r~~~~~~l~l~l~~~Gv~l~~~ 244 (412)
-- +++ | +-++..++|++++++|.++...
T Consensus 100 grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 100 GRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred hhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 22 232 2 3457788999999999887643
No 126
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=41.87 E-value=8.6 Score=36.05 Aligned_cols=58 Identities=10% Similarity=0.075 Sum_probs=0.0
Q ss_pred HHHHHHhhhHHHHHHHH-HHHhCcc-cChhhHHHHHHHHHHHHhhhcCcc--cccHHHHHHH
Q 015159 200 FTHTIKALEPFFNAAAS-QFILGQQ-LPLTLWLSLAPVVIGVSMASLTEL--SFNWTGFISA 257 (412)
Q Consensus 200 ~~~ii~~~~Pvf~~lls-~~~l~er-~~~~~~l~l~l~~~Gv~l~~~~~~--~~~~~G~~l~ 257 (412)
..+++.+...+.++++- .+++|+| +-..-.++++++++-..++..-.. +.-+.|+++.
T Consensus 51 a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l 112 (381)
T PF05297_consen 51 ALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVIL 112 (381)
T ss_dssp --------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 33444444444433333 3344544 345556666666655555444322 2224565443
No 127
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=41.63 E-value=2.5e+02 Score=24.88 Aligned_cols=54 Identities=19% Similarity=0.157 Sum_probs=34.8
Q ss_pred CcccChhhHHHHHHHHHHHHhhhc-------CcccccHHHHHHHHHHHHHHHHHHHHHHHh
Q 015159 221 GQQLPLTLWLSLAPVVIGVSMASL-------TELSFNWTGFISAMISNISFTYRSIYSKKA 274 (412)
Q Consensus 221 ~er~~~~~~l~l~l~~~Gv~l~~~-------~~~~~~~~G~~l~l~s~l~~a~~~v~~kk~ 274 (412)
++|+..++++.+.....-+.+++. .+.+..+.-+.+.+++++..|++..+.||.
T Consensus 156 sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~ 216 (226)
T COG4858 156 SQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKK 216 (226)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 467777777666554444433322 122333456788899999999999888775
No 128
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=37.99 E-value=49 Score=25.24 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=22.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhHH
Q 015159 376 KISTQTGIGTVIAIAGVAAYSYIKAQME 403 (412)
Q Consensus 376 ~~t~~~~iG~~lvl~Gv~l~~~~~~~~~ 403 (412)
.+++..++|.+++++|..+|.....+.+
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~lr~~~Pe 31 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFLRFFRPE 31 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 4788999999999999999976554433
No 129
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=36.95 E-value=64 Score=30.47 Aligned_cols=131 Identities=11% Similarity=0.020 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHH-HHHHHHHhhC-CChHHHHHHHHHHHHHHHHHHHHh-CC----CCC-CCCCHHHHHHHHHHHHHHHH
Q 015159 113 FFFMWYFLNVIFN-ILNKRIYNYF-PYPYFVSVIHLLVGVVYCLVSWAV-GL----PKR-APIDSKLLKLLIPVAVCHAL 184 (412)
Q Consensus 113 ~~~~w~~~~~~~~-~~~K~~~~~f-~~P~~l~~~r~~~~~~~~~~~~~~-~~----~~~-~~~~~~~~~~~~~~~l~~~~ 184 (412)
....|-.+....+ +..|+.+... +.-|.+++...+.+.++.++.... +. ..- .....+.|..+.+-|++++.
T Consensus 188 ifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~ 267 (347)
T KOG1442|consen 188 IFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFA 267 (347)
T ss_pred HHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHH
Confidence 3344433333333 5566554332 233788888888887776654432 21 110 11244556666666777665
Q ss_pred HHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhh
Q 015159 185 GHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMAS 243 (412)
Q Consensus 185 ~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~ 243 (412)
..+...+=++.+|+-+..+-....-..=.+++..+++|.-+...|-+.++++.|-....
T Consensus 268 mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT 326 (347)
T KOG1442|consen 268 MGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT 326 (347)
T ss_pred hhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence 55555555666666555555555555566777888899888888877777666665543
No 130
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=36.04 E-value=42 Score=22.61 Aligned_cols=26 Identities=8% Similarity=0.181 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhh
Q 015159 383 IGTVIAIAGVAAYSYIKAQMEEEKRQ 408 (412)
Q Consensus 383 iG~~lvl~Gv~l~~~~~~~~~~~~~~ 408 (412)
+-+.++++|+++|.+.++.+++-++.
T Consensus 17 ~~~~~~Figiv~wa~~p~~k~~f~ea 42 (48)
T cd01324 17 LYLALFFLGVVVWAFRPGRKKAFDEA 42 (48)
T ss_pred HHHHHHHHHHHHHHhCCCcchhHHHH
Confidence 33578899999999887665554443
No 131
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=35.57 E-value=2e+02 Score=24.34 Aligned_cols=29 Identities=17% Similarity=0.070 Sum_probs=15.0
Q ss_pred cchhHHHHHHHHHHHHHHHHH-----HHHhCCcc
Q 015159 349 VAPLTHAVGNVLKRVFVIGFS-----ILAFGNKI 377 (412)
Q Consensus 349 ~sa~~~sv~~~l~~v~~ii~s-----~~~fge~~ 377 (412)
-+.+..+..-|+-|.+.++++ .++++|.+
T Consensus 72 kslL~sA~LvYi~PL~~l~v~~~La~~L~~~e~~ 105 (150)
T COG3086 72 KSLLKSALLVYIFPLVGLFLGAILAQYLFFSELI 105 (150)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 344455555555565555544 44455553
No 132
>PRK10655 potE putrescine transporter; Provisional
Probab=35.17 E-value=4.7e+02 Score=26.13 Aligned_cols=27 Identities=19% Similarity=0.380 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 015159 380 QTGIGTVIAIAGVAAYSYIKAQMEEEK 406 (412)
Q Consensus 380 ~~~iG~~lvl~Gv~l~~~~~~~~~~~~ 406 (412)
....|..+.++|..+|....+|.+.|+
T Consensus 409 ~~~~~~~~~~~g~~~y~~~~~~~~~~~ 435 (438)
T PRK10655 409 AMLYGSIVTFLGWTLYGLISPRFELKN 435 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 346689999999999977655544443
No 133
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=33.54 E-value=4.4e+02 Score=25.24 Aligned_cols=56 Identities=16% Similarity=0.202 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccchHHHHHHHhhhHHHHHHHHHHHhCcccChhhHHHHH
Q 015159 174 LLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNAAASQFILGQQLPLTLWLSLA 233 (412)
Q Consensus 174 ~~~~~~l~~~~~~~~~~~al~~~s~s~~~ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~ 233 (412)
.++..++...+-+ -.+++|...+ ..-+..+.|+++.+.-.++.++.-++.+.++.+
T Consensus 169 ~ll~~a~~QGvL~---Ga~ls~~~l~-sePf~~LT~iv~sfi~~~i~~~~~~R~~lLg~~ 224 (299)
T PF05884_consen 169 ALLFFALFQGVLV---GAGLSHLYLS-SEPFIALTPIVSSFIYPLIAGHGTNRQKLLGIV 224 (299)
T ss_pred HHHHHHHHHHHHH---HHHhhccccc-CCcHHHHHHHHHHHHHHHHccCCcchHHHHHHH
Confidence 3455555554322 2233443333 255667788888777777776644555555443
No 134
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=32.73 E-value=5.4e+02 Score=26.10 Aligned_cols=23 Identities=13% Similarity=0.255 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhH
Q 015159 380 QTGIGTVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 380 ~~~iG~~lvl~Gv~l~~~~~~~~ 402 (412)
....|.++...|+.+|.+.++++
T Consensus 417 ~~~~~~~~~~~g~~~y~~~~~~~ 439 (473)
T TIGR00905 417 YLLLGFILYAPGIIFYGRARKER 439 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678899999998888765543
No 135
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=32.53 E-value=5.4e+02 Score=26.05 Aligned_cols=22 Identities=9% Similarity=0.230 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHh
Q 015159 380 QTGIGTVIAIAGVAAYSYIKAQ 401 (412)
Q Consensus 380 ~~~iG~~lvl~Gv~l~~~~~~~ 401 (412)
..++|.++.+.|+.+|.+.+++
T Consensus 412 ~~~~~~~~~~~g~~~y~~~~~~ 433 (468)
T TIGR03810 412 YLLLSAILYAPGIYFYARARKE 433 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 5788889999999999765543
No 136
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=30.46 E-value=1.3e+02 Score=24.83 Aligned_cols=40 Identities=20% Similarity=0.433 Sum_probs=28.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhCC-ChHHHHHHH
Q 015159 106 PALVTGFFFFMWYFLNVIFNILNKRIYNYFP-YPYFVSVIH 145 (412)
Q Consensus 106 ~~l~~~~~~~~w~~~~~~~~~~~K~~~~~f~-~P~~l~~~r 145 (412)
..+.+.+++++..+.++...++-|.++..++ ||++++-+-
T Consensus 54 e~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlT 94 (130)
T PF08627_consen 54 ENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLT 94 (130)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhc
Confidence 4566677777776666666688888887765 788877653
No 137
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=29.64 E-value=5.9e+02 Score=25.59 Aligned_cols=93 Identities=13% Similarity=-0.060 Sum_probs=46.9
Q ss_pred HHHhhhHHHHHHHHHHHhCcccChhhHHHHHHHHHHHHhhhcCcccccHHHH-HHH-HHHHHHHHHHHHHHHHhc--CCC
Q 015159 203 TIKALEPFFNAAASQFILGQQLPLTLWLSLAPVVIGVSMASLTELSFNWTGF-ISA-MISNISFTYRSIYSKKAM--TDM 278 (412)
Q Consensus 203 ii~~~~Pvf~~lls~~~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~~~G~-~l~-l~s~l~~a~~~v~~kk~~--~~~ 278 (412)
+..+..-+-.++.+++. ++|++..-...- +++|.+-++-.-.-.+++|- +.. +.+.+|+-....+.||+- +.+
T Consensus 235 lAaa~g~l~w~~~e~~~-~~Kp~~lg~~sG--~vAGLVaITpaag~V~p~~A~iiGii~g~i~~~a~~~lk~~l~~DD~l 311 (409)
T COG0004 235 LAAAAGALGWMLIEWLR-NGKPSLLGAASG--AVAGLVAITPAAGFVSPWGALIIGLIAGVICYFAVKLLKKKLGVDDAL 311 (409)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCchhhhhhH--HHhHHHhcCCcccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 33344455566666666 667765544332 45566655543333344443 333 445555555555555442 224
Q ss_pred ChhhHHHHHHHHHHHHHHHH
Q 015159 279 DSTNIYAYISIIALFVCIPP 298 (412)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~ 298 (412)
|.+..=....+++.+....+
T Consensus 312 d~f~vHGvgGi~G~i~~GiF 331 (409)
T COG0004 312 DVFGVHGVGGIVGAILTGIF 331 (409)
T ss_pred cceeccchhhHHHHHHHHHh
Confidence 44455555566666655443
No 138
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=28.93 E-value=1.8e+02 Score=23.96 Aligned_cols=20 Identities=10% Similarity=-0.077 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 015159 353 THAVGNVLKRVFVIGFSILA 372 (412)
Q Consensus 353 ~~sv~~~l~~v~~ii~s~~~ 372 (412)
..+...|+-|++.++++.++
T Consensus 69 ~aa~l~Y~lPll~li~g~~l 88 (135)
T PF04246_consen 69 KAAFLVYLLPLLALIAGAVL 88 (135)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34455556666665555443
No 139
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=27.68 E-value=4.4e+02 Score=23.49 Aligned_cols=24 Identities=25% Similarity=0.344 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 015159 251 WTGFISAMISNISFTYRSIYSKKA 274 (412)
Q Consensus 251 ~~G~~l~l~s~l~~a~~~v~~kk~ 274 (412)
+-+....++++++++.+..+.||.
T Consensus 178 l~~~~~iiig~i~~~~~~~lkkk~ 201 (206)
T PF06570_consen 178 LPPWVYIIIGVIAFALRFYLKKKY 201 (206)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 345667788899999987777664
No 140
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=26.78 E-value=90 Score=20.84 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHH
Q 015159 382 GIGTVIAIAGVAAYSYIKAQMEE 404 (412)
Q Consensus 382 ~iG~~lvl~Gv~l~~~~~~~~~~ 404 (412)
.+-..++++|++++.+.++++++
T Consensus 15 ~v~~~~~F~gi~~w~~~~~~k~~ 37 (49)
T PF05545_consen 15 TVLFFVFFIGIVIWAYRPRNKKR 37 (49)
T ss_pred HHHHHHHHHHHHHHHHcccchhh
Confidence 33445677888888887664433
No 141
>PRK10263 DNA translocase FtsK; Provisional
Probab=25.82 E-value=1.1e+03 Score=27.82 Aligned_cols=12 Identities=25% Similarity=0.116 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 015159 229 WLSLAPVVIGVS 240 (412)
Q Consensus 229 ~l~l~l~~~Gv~ 240 (412)
.++++++++++.
T Consensus 25 ~~gIlLlllAlf 36 (1355)
T PRK10263 25 ALLILIVLFAVW 36 (1355)
T ss_pred HHHHHHHHHHHH
Confidence 344444444433
No 142
>COG4147 DhlC Predicted symporter [General function prediction only]
Probab=25.72 E-value=2.8e+02 Score=28.57 Aligned_cols=58 Identities=10% Similarity=0.087 Sum_probs=39.1
Q ss_pred HHHhhccchhHHHHHHHHHHHHHHHHHHHHh------------CCccchhhHHHHHHHHHHHHHHHHHHH
Q 015159 343 TNTLERVAPLTHAVGNVLKRVFVIGFSILAF------------GNKISTQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 343 ~~~l~~~sa~~~sv~~~l~~v~~ii~s~~~f------------ge~~t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
++=..+.++..-.+.+....+.-++++-.++ +-+++...+.|+.+-+.+.++.+...+
T Consensus 440 WKr~n~~GAi~G~~~GL~~tlv~i~l~~~i~~~~~~~~~~~~~~~~~~~~g~~sipv~F~~~~ivSllt~ 509 (529)
T COG4147 440 WKRLNTAGAIAGMLLGLIVTLVLIILSPTIWVVILGHPGFGWAGFPYEGPGLFSIPVGFLGAWIVSLLTK 509 (529)
T ss_pred HhhccHHhHHHHHHHHHHHHHHHHHhCccccccccCccccccccCCCCCcchhhhhHHHHHhHheeccCC
Confidence 3444555666666666666666666554333 345778899999999999998886544
No 143
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=24.93 E-value=6.5e+02 Score=24.50 Aligned_cols=27 Identities=19% Similarity=0.234 Sum_probs=16.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhHHH
Q 015159 378 STQTGIGTVIAIAGVAAYSYIKAQMEE 404 (412)
Q Consensus 378 t~~~~iG~~lvl~Gv~l~~~~~~~~~~ 404 (412)
.....++.++.+.++.+..+.++..++
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~~~~~~~ 395 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWLMRGTIGR 395 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 344677777777777776544444333
No 144
>PRK10666 ammonium transporter; Provisional
Probab=24.20 E-value=7.6e+02 Score=25.03 Aligned_cols=78 Identities=10% Similarity=-0.021 Sum_probs=34.7
Q ss_pred HhCcccChhhHHHHHHHHHHHHhhhcCccccc-HHHHHHHHHHHHHHHHHHHHHHHhcC---CCChhhHHHHHHHHHHHH
Q 015159 219 ILGQQLPLTLWLSLAPVVIGVSMASLTELSFN-WTGFISAMISNISFTYRSIYSKKAMT---DMDSTNIYAYISIIALFV 294 (412)
Q Consensus 219 ~l~er~~~~~~l~l~l~~~Gv~l~~~~~~~~~-~~G~~l~l~s~l~~a~~~v~~kk~~~---~~~~~~~~~~~~~~~~~~ 294 (412)
+.++|++......- +++|.+-++-.-.-.+ +..++..+++.+..-+...+.||..+ ..|...+=....+++.+.
T Consensus 273 ~~~gk~~~~~~~nG--~LaGLVaITa~a~~v~p~~A~iiG~vag~v~~~~~~~l~~~~~iDD~~~a~~vHgv~Gi~G~l~ 350 (428)
T PRK10666 273 ALRGKPSLLGACSG--AIAGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVTMLKRWLRVDDPCDVFGVHGVCGIVGCIL 350 (428)
T ss_pred HHhCCCCHHHHHHH--HhhhhhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcCccHhhhHhHHHHHHH
Confidence 34556665544333 2345444433222223 34445555555544333333444332 244445555555566555
Q ss_pred HHHH
Q 015159 295 CIPP 298 (412)
Q Consensus 295 ~~~~ 298 (412)
...+
T Consensus 351 ~glf 354 (428)
T PRK10666 351 TGIF 354 (428)
T ss_pred HHHh
Confidence 4443
No 145
>PF14981 FAM165: FAM165 family
Probab=22.45 E-value=1.4e+02 Score=19.89 Aligned_cols=18 Identities=28% Similarity=0.423 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHhH
Q 015159 385 TVIAIAGVAAYSYIKAQM 402 (412)
Q Consensus 385 ~~lvl~Gv~l~~~~~~~~ 402 (412)
..+.++|+=+|++.+...
T Consensus 20 lClaFAgvK~yQ~krlEa 37 (51)
T PF14981_consen 20 LCLAFAGVKMYQRKRLEA 37 (51)
T ss_pred HHHHHhhHHHHHHHHHHH
Confidence 357789999998776543
No 146
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=21.96 E-value=8.1e+02 Score=24.51 Aligned_cols=21 Identities=14% Similarity=0.439 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHH
Q 015159 383 IGTVIAIAGVAAYSYIKAQME 403 (412)
Q Consensus 383 iG~~lvl~Gv~l~~~~~~~~~ 403 (412)
.|.++.+.|+.+|-..+++++
T Consensus 419 ~~~~~~~~g~~~y~~~~~~~~ 439 (445)
T PRK11357 419 CAVIVIATGLPAYAFWAKRSR 439 (445)
T ss_pred HHHHHHHHhhhHHhheechhh
Confidence 588888899998887665543
No 147
>PRK10862 SoxR reducing system protein RseC; Provisional
Probab=21.13 E-value=3.5e+02 Score=23.04 Aligned_cols=15 Identities=7% Similarity=-0.062 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHH
Q 015159 355 AVGNVLKRVFVIGFS 369 (412)
Q Consensus 355 sv~~~l~~v~~ii~s 369 (412)
+...|+-|++.++.+
T Consensus 78 a~lvYllPLl~li~g 92 (154)
T PRK10862 78 ALLVYMTPLVGLFLG 92 (154)
T ss_pred HHHHHHHHHHHHHHH
Confidence 333344444444433
No 148
>PRK02935 hypothetical protein; Provisional
Probab=20.98 E-value=3.9e+02 Score=21.32 Aligned_cols=23 Identities=22% Similarity=0.290 Sum_probs=16.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH
Q 015159 378 STQTGIGTVIAIAGVAAYSYIKA 400 (412)
Q Consensus 378 t~~~~iG~~lvl~Gv~l~~~~~~ 400 (412)
+...++|.+.++++..+|-+...
T Consensus 41 ~ifm~~G~l~~l~S~vvYFwiGm 63 (110)
T PRK02935 41 TIFMLLGFLAVIASTVVYFWIGM 63 (110)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Confidence 34456788888888888877654
No 149
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=20.66 E-value=3.1e+02 Score=25.36 Aligned_cols=19 Identities=11% Similarity=0.156 Sum_probs=12.4
Q ss_pred cchhhHHHHHHHHHHHHHH
Q 015159 377 ISTQTGIGTVIAIAGVAAY 395 (412)
Q Consensus 377 ~t~~~~iG~~lvl~Gv~l~ 395 (412)
.+.+.|++-++++.|.++.
T Consensus 219 ~n~q~wLwwi~~vlG~ll~ 237 (262)
T KOG4812|consen 219 FNGQYWLWWIFLVLGLLLF 237 (262)
T ss_pred cccchHHHHHHHHHHHHHH
Confidence 4446677777777777654
No 150
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]
Probab=20.12 E-value=5.6e+02 Score=23.51 Aligned_cols=24 Identities=21% Similarity=0.375 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCh
Q 015159 115 FMWYFLNVIFNILNKRIYNYFPYP 138 (412)
Q Consensus 115 ~~w~~~~~~~~~~~K~~~~~f~~P 138 (412)
.+|.+.+....+..|+++++++.|
T Consensus 8 ~f~l~lTl~~y~~a~~l~~r~~~~ 31 (230)
T COG1346 8 LFGLLLTLLAYFAAKRLYKRTKSP 31 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc
Confidence 445566667777889999886644
Done!