Query 015160
Match_columns 412
No_of_seqs 248 out of 934
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 07:44:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015160.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015160hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a14_A Indolethylamine N-methy 99.8 2.7E-18 9.2E-23 162.6 13.5 215 172-403 39-261 (263)
2 4htf_A S-adenosylmethionine-de 99.8 3.3E-17 1.1E-21 155.3 19.7 176 189-404 68-281 (285)
3 1pjz_A Thiopurine S-methyltran 99.8 4.4E-18 1.5E-22 155.5 12.8 150 189-374 22-174 (203)
4 3e8s_A Putative SAM dependent 99.8 4.3E-17 1.5E-21 146.9 19.0 196 146-402 11-227 (227)
5 3e23_A Uncharacterized protein 99.8 2.5E-17 8.4E-22 149.0 16.9 190 147-406 12-205 (211)
6 3l8d_A Methyltransferase; stru 99.8 5.1E-17 1.8E-21 149.0 19.2 152 172-374 41-198 (242)
7 2p7i_A Hypothetical protein; p 99.7 1.1E-17 3.8E-22 152.5 14.4 152 170-374 29-197 (250)
8 2i62_A Nicotinamide N-methyltr 99.7 1.1E-17 3.8E-22 155.1 14.7 199 189-403 56-262 (265)
9 4gek_A TRNA (CMO5U34)-methyltr 99.7 4.5E-17 1.5E-21 156.0 19.1 143 189-374 70-243 (261)
10 2gb4_A Thiopurine S-methyltran 99.7 3.6E-17 1.2E-21 155.9 17.8 156 189-374 68-225 (252)
11 3pfg_A N-methyltransferase; N, 99.7 2.3E-17 7.9E-22 154.4 15.8 107 173-332 39-149 (263)
12 1y8c_A S-adenosylmethionine-de 99.7 8.7E-17 3E-21 146.9 17.8 179 171-402 20-245 (246)
13 3h2b_A SAM-dependent methyltra 99.7 1.3E-16 4.4E-21 143.2 17.6 138 190-375 42-181 (203)
14 3lcc_A Putative methyl chlorid 99.7 4E-17 1.4E-21 150.3 14.6 139 190-376 67-207 (235)
15 3g5l_A Putative S-adenosylmeth 99.7 1.6E-16 5.6E-21 147.5 18.9 180 175-403 33-246 (253)
16 3d2l_A SAM-dependent methyltra 99.7 2.5E-16 8.7E-21 144.2 19.4 176 169-402 18-243 (243)
17 2xvm_A Tellurite resistance pr 99.7 7.7E-17 2.7E-21 143.0 14.6 164 189-402 32-199 (199)
18 2g72_A Phenylethanolamine N-me 99.7 6.9E-17 2.4E-21 153.9 14.5 210 174-404 57-281 (289)
19 2kw5_A SLR1183 protein; struct 99.7 4.4E-16 1.5E-20 139.6 18.4 138 192-374 32-169 (202)
20 3dh0_A SAM dependent methyltra 99.7 2.9E-16 1E-20 142.2 17.4 140 189-374 37-179 (219)
21 3hnr_A Probable methyltransfer 99.7 6.4E-16 2.2E-20 140.0 19.3 151 170-374 33-199 (220)
22 1ri5_A MRNA capping enzyme; me 99.7 7.7E-17 2.6E-21 152.0 13.0 148 189-376 64-250 (298)
23 1wzn_A SAM-dependent methyltra 99.7 3.9E-16 1.3E-20 144.6 17.2 100 189-332 41-143 (252)
24 3ou2_A SAM-dependent methyltra 99.7 4E-16 1.4E-20 140.3 16.0 139 189-374 46-203 (218)
25 3dli_A Methyltransferase; PSI- 99.7 4.2E-16 1.4E-20 144.1 15.7 150 174-374 28-182 (240)
26 3bkw_A MLL3908 protein, S-aden 99.7 4.5E-16 1.5E-20 142.5 15.5 150 177-374 34-212 (243)
27 3bxo_A N,N-dimethyltransferase 99.7 1.5E-15 5.2E-20 138.7 17.5 107 173-332 29-139 (239)
28 3sm3_A SAM-dependent methyltra 99.7 2.3E-15 8E-20 136.5 18.2 149 189-374 30-205 (235)
29 3dtn_A Putative methyltransfer 99.7 4.6E-15 1.6E-19 135.9 20.0 157 171-374 28-212 (234)
30 3dlc_A Putative S-adenosyl-L-m 99.7 4.4E-16 1.5E-20 139.5 12.8 159 171-374 29-201 (219)
31 1nkv_A Hypothetical protein YJ 99.7 9.4E-16 3.2E-20 142.0 14.6 158 170-373 20-184 (256)
32 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.8E-15 6.2E-20 139.6 16.0 142 189-375 93-237 (254)
33 2ex4_A Adrenal gland protein A 99.7 1.1E-15 3.7E-20 141.5 14.1 142 189-374 79-223 (241)
34 3cgg_A SAM-dependent methyltra 99.6 6.4E-15 2.2E-19 129.3 17.9 145 189-402 46-195 (195)
35 3ujc_A Phosphoethanolamine N-m 99.6 2.8E-15 9.6E-20 138.7 15.9 140 189-374 55-204 (266)
36 1vlm_A SAM-dependent methyltra 99.6 4.7E-15 1.6E-19 135.5 17.1 174 170-402 34-219 (219)
37 1vl5_A Unknown conserved prote 99.6 1.5E-15 5.2E-20 141.8 14.0 142 189-373 37-187 (260)
38 3m70_A Tellurite resistance pr 99.6 2.1E-15 7.2E-20 143.0 15.2 174 172-402 110-286 (286)
39 3bus_A REBM, methyltransferase 99.6 3.7E-15 1.3E-19 139.5 16.6 157 174-374 49-214 (273)
40 3hem_A Cyclopropane-fatty-acyl 99.6 6.4E-15 2.2E-19 141.2 18.5 147 189-380 72-247 (302)
41 3jwh_A HEN1; methyltransferase 99.6 3E-15 1E-19 136.1 15.1 149 189-374 29-190 (217)
42 2p35_A Trans-aconitate 2-methy 99.6 1.3E-15 4.5E-20 141.0 12.9 136 189-372 33-186 (259)
43 3g2m_A PCZA361.24; SAM-depende 99.6 7.8E-15 2.7E-19 140.4 18.7 116 173-332 70-188 (299)
44 3ccf_A Cyclopropane-fatty-acyl 99.6 1.2E-15 4.3E-20 144.3 12.1 138 189-374 57-208 (279)
45 3cc8_A Putative methyltransfer 99.6 3E-15 1E-19 135.0 13.8 152 174-376 21-185 (230)
46 2avn_A Ubiquinone/menaquinone 99.6 2.4E-15 8.1E-20 141.2 13.5 174 143-374 15-211 (260)
47 1kpg_A CFA synthase;, cyclopro 99.6 9.7E-15 3.3E-19 138.2 17.7 155 174-376 52-228 (287)
48 3thr_A Glycine N-methyltransfe 99.6 2.6E-14 9E-19 135.3 20.5 109 189-332 57-173 (293)
49 3i9f_A Putative type 11 methyl 99.6 5E-15 1.7E-19 129.2 14.2 130 189-374 17-146 (170)
50 2o57_A Putative sarcosine dime 99.6 8E-15 2.7E-19 139.4 16.7 141 189-374 82-232 (297)
51 3f4k_A Putative methyltransfer 99.6 9.8E-15 3.3E-19 135.3 16.6 156 173-374 32-194 (257)
52 3jwg_A HEN1, methyltransferase 99.6 3E-14 1E-18 129.5 19.3 149 189-374 29-190 (219)
53 3kkz_A Uncharacterized protein 99.6 1.2E-14 4E-19 136.5 15.9 156 173-374 32-194 (267)
54 3vc1_A Geranyl diphosphate 2-C 99.6 2E-14 6.7E-19 138.8 17.5 155 176-374 106-267 (312)
55 2yqz_A Hypothetical protein TT 99.6 5.5E-15 1.9E-19 136.8 13.0 159 170-373 22-193 (263)
56 2fk8_A Methoxy mycolic acid sy 99.6 1.2E-14 4E-19 140.1 15.6 153 174-374 78-252 (318)
57 1ve3_A Hypothetical protein PH 99.6 3.4E-14 1.2E-18 128.7 17.7 127 159-333 13-141 (227)
58 1xxl_A YCGJ protein; structura 99.6 1.9E-14 6.6E-19 133.4 16.3 143 189-373 21-171 (239)
59 3gu3_A Methyltransferase; alph 99.6 2.8E-14 9.6E-19 136.0 16.3 155 174-374 9-188 (284)
60 3ege_A Putative methyltransfer 99.6 1E-14 3.4E-19 137.2 12.8 152 171-375 19-177 (261)
61 2p8j_A S-adenosylmethionine-de 99.6 2.1E-14 7.3E-19 128.7 12.3 156 170-374 10-181 (209)
62 3ocj_A Putative exported prote 99.6 9.8E-14 3.4E-18 133.5 17.8 145 189-375 118-290 (305)
63 3e05_A Precorrin-6Y C5,15-meth 99.6 2.4E-13 8.2E-18 122.6 19.2 124 189-373 40-165 (204)
64 3mgg_A Methyltransferase; NYSG 99.5 5.2E-14 1.8E-18 132.2 14.3 144 189-374 37-196 (276)
65 4hg2_A Methyltransferase type 99.5 2.1E-14 7.1E-19 137.5 11.5 106 173-332 28-133 (257)
66 3g07_A 7SK snRNA methylphospha 99.5 2.6E-14 9E-19 137.5 11.6 199 189-404 46-289 (292)
67 3ggd_A SAM-dependent methyltra 99.5 1.3E-13 4.4E-18 127.3 15.5 142 189-374 56-217 (245)
68 4e2x_A TCAB9; kijanose, tetron 99.5 5.9E-14 2E-18 140.7 14.1 157 172-375 93-252 (416)
69 3ofk_A Nodulation protein S; N 99.5 6.1E-14 2.1E-18 126.9 12.9 131 189-372 51-184 (216)
70 4fsd_A Arsenic methyltransfera 99.5 7.5E-14 2.6E-18 139.6 14.7 150 189-372 83-247 (383)
71 3grz_A L11 mtase, ribosomal pr 99.5 8.2E-14 2.8E-18 125.5 13.2 134 173-374 49-183 (205)
72 2vdw_A Vaccinia virus capping 99.5 1.1E-13 3.8E-18 135.1 14.2 151 189-374 48-244 (302)
73 1zx0_A Guanidinoacetate N-meth 99.5 5.3E-14 1.8E-18 130.2 10.6 151 173-370 48-204 (236)
74 1l3i_A Precorrin-6Y methyltran 99.5 1.6E-13 5.4E-18 120.1 12.8 154 189-402 33-187 (192)
75 3m33_A Uncharacterized protein 99.5 7.8E-14 2.7E-18 128.5 11.3 117 189-374 48-165 (226)
76 1xdz_A Methyltransferase GIDB; 99.5 7.4E-13 2.5E-17 123.2 17.3 129 189-375 70-201 (240)
77 3mq2_A 16S rRNA methyltransfer 99.5 1.4E-13 4.6E-18 125.3 11.5 148 189-376 27-184 (218)
78 2zfu_A Nucleomethylin, cerebra 99.5 7.9E-13 2.7E-17 119.7 16.3 141 146-374 37-177 (215)
79 2pxx_A Uncharacterized protein 99.5 1.8E-13 6.2E-18 122.3 11.8 114 171-333 29-158 (215)
80 3mti_A RRNA methylase; SAM-dep 99.5 2.5E-13 8.6E-18 120.2 12.6 103 189-332 22-133 (185)
81 2aot_A HMT, histamine N-methyl 99.5 3.3E-13 1.1E-17 129.1 14.3 191 142-373 9-218 (292)
82 3njr_A Precorrin-6Y methylase; 99.5 1.2E-12 4.2E-17 119.8 17.4 124 189-374 55-178 (204)
83 3orh_A Guanidinoacetate N-meth 99.5 7.4E-14 2.5E-18 130.6 8.8 153 173-372 48-206 (236)
84 3bgv_A MRNA CAP guanine-N7 met 99.5 6E-13 2.1E-17 128.3 15.2 166 172-374 22-230 (313)
85 3hm2_A Precorrin-6Y C5,15-meth 99.5 1.2E-12 4.2E-17 114.1 15.2 125 189-374 25-151 (178)
86 3g5t_A Trans-aconitate 3-methy 99.5 7.5E-13 2.6E-17 126.6 14.7 155 172-368 23-196 (299)
87 2yxd_A Probable cobalt-precorr 99.5 1.7E-12 6E-17 112.8 15.7 121 189-374 35-155 (183)
88 2nxc_A L11 mtase, ribosomal pr 99.5 9.2E-13 3.1E-17 124.7 14.8 133 174-374 110-242 (254)
89 3evz_A Methyltransferase; NYSG 99.4 1.7E-12 6E-17 118.6 15.7 129 189-374 55-204 (230)
90 3bkx_A SAM-dependent methyltra 99.4 1.9E-12 6.6E-17 121.2 16.2 149 189-376 43-219 (275)
91 2r3s_A Uncharacterized protein 99.4 1.7E-12 5.9E-17 125.3 16.1 142 189-374 165-321 (335)
92 1nt2_A Fibrillarin-like PRE-rR 99.4 6.3E-12 2.2E-16 116.0 19.2 131 189-375 57-194 (210)
93 3p2e_A 16S rRNA methylase; met 99.4 1.4E-13 4.8E-18 128.6 7.8 171 189-397 24-210 (225)
94 3g89_A Ribosomal RNA small sub 99.4 3.3E-12 1.1E-16 121.1 17.1 173 144-376 32-212 (249)
95 1fbn_A MJ fibrillarin homologu 99.4 6.5E-12 2.2E-16 116.1 18.5 135 189-374 74-211 (230)
96 3r0q_C Probable protein argini 99.4 1E-12 3.5E-17 131.7 13.5 113 173-331 50-166 (376)
97 1jsx_A Glucose-inhibited divis 99.4 4.7E-12 1.6E-16 113.7 16.0 118 190-374 66-186 (207)
98 3q87_B N6 adenine specific DNA 99.4 2.8E-12 9.7E-17 113.8 14.4 116 189-374 23-147 (170)
99 3lpm_A Putative methyltransfer 99.4 7.8E-12 2.7E-16 117.7 18.0 132 189-376 49-201 (259)
100 1g8a_A Fibrillarin-like PRE-rR 99.4 8.6E-12 2.9E-16 114.2 17.7 136 189-375 73-211 (227)
101 1yb2_A Hypothetical protein TA 99.4 1.7E-12 5.8E-17 123.5 13.2 123 189-374 110-235 (275)
102 2qe6_A Uncharacterized protein 99.4 4.7E-12 1.6E-16 121.6 16.3 135 190-372 78-238 (274)
103 3mcz_A O-methyltransferase; ad 99.4 7.7E-12 2.6E-16 122.2 17.9 143 190-373 180-336 (352)
104 1x19_A CRTF-related protein; m 99.4 9.8E-12 3.4E-16 122.4 18.4 155 174-375 178-347 (359)
105 2fyt_A Protein arginine N-meth 99.4 1.8E-12 6.2E-17 128.2 12.7 101 189-331 64-168 (340)
106 3mb5_A SAM-dependent methyltra 99.4 2.3E-12 8E-17 119.8 12.6 138 170-373 77-219 (255)
107 1dus_A MJ0882; hypothetical pr 99.4 4.8E-12 1.6E-16 110.8 13.9 116 174-333 40-156 (194)
108 3p9n_A Possible methyltransfer 99.4 3.1E-12 1.1E-16 114.2 12.9 104 189-332 44-151 (189)
109 3dp7_A SAM-dependent methyltra 99.4 4.7E-12 1.6E-16 125.5 15.3 145 189-374 179-340 (363)
110 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.3E-11 4.4E-16 113.9 17.1 136 189-374 77-215 (233)
111 3iv6_A Putative Zn-dependent a 99.4 1.4E-12 4.7E-17 125.9 10.9 110 174-332 33-146 (261)
112 3q7e_A Protein arginine N-meth 99.4 1.7E-12 5.8E-17 128.7 11.7 101 189-331 66-170 (349)
113 2gs9_A Hypothetical protein TT 99.4 3.2E-12 1.1E-16 115.1 12.5 136 175-367 27-171 (211)
114 2pwy_A TRNA (adenine-N(1)-)-me 99.4 2.4E-12 8.2E-17 119.2 11.4 137 171-372 81-220 (258)
115 1qzz_A RDMB, aclacinomycin-10- 99.4 2.2E-11 7.5E-16 119.7 18.6 162 189-403 182-357 (374)
116 1g6q_1 HnRNP arginine N-methyl 99.4 3.8E-12 1.3E-16 125.0 13.1 101 189-331 38-142 (328)
117 3opn_A Putative hemolysin; str 99.4 4E-13 1.4E-17 126.6 5.8 139 189-374 37-182 (232)
118 2frn_A Hypothetical protein PH 99.4 5.6E-12 1.9E-16 120.9 13.3 128 189-372 125-253 (278)
119 3fpf_A Mtnas, putative unchara 99.4 5.7E-12 1.9E-16 124.1 13.6 97 189-332 122-220 (298)
120 2b3t_A Protein methyltransfera 99.3 1.7E-11 5.7E-16 116.5 16.3 136 173-372 97-259 (276)
121 2fca_A TRNA (guanine-N(7)-)-me 99.3 1.1E-11 3.7E-16 114.0 14.5 128 189-373 38-176 (213)
122 4dzr_A Protein-(glutamine-N5) 99.3 1.6E-12 5.6E-17 115.8 8.6 130 189-374 30-190 (215)
123 1yzh_A TRNA (guanine-N(7)-)-me 99.3 8.7E-12 3E-16 113.6 13.4 129 189-374 41-180 (214)
124 3gwz_A MMCR; methyltransferase 99.3 2.9E-11 9.9E-16 120.1 17.6 151 175-374 191-354 (369)
125 3eey_A Putative rRNA methylase 99.3 6.2E-12 2.1E-16 112.3 11.4 104 189-332 22-137 (197)
126 1ws6_A Methyltransferase; stru 99.3 3.3E-12 1.1E-16 110.4 9.2 101 189-332 41-145 (171)
127 1o54_A SAM-dependent O-methylt 99.3 2.8E-11 9.4E-16 114.9 15.8 137 171-373 97-236 (277)
128 2ld4_A Anamorsin; methyltransf 99.3 2.3E-12 8E-17 113.5 7.6 119 189-372 12-131 (176)
129 1ej0_A FTSJ; methyltransferase 99.3 2.6E-11 8.9E-16 103.8 14.0 138 189-402 22-178 (180)
130 3gdh_A Trimethylguanosine synt 99.3 7.8E-13 2.7E-17 122.0 4.5 136 189-372 78-215 (241)
131 3u81_A Catechol O-methyltransf 99.3 2.2E-11 7.4E-16 111.7 14.1 142 142-332 19-168 (221)
132 3ntv_A MW1564 protein; rossman 99.3 2.7E-11 9.2E-16 112.4 14.6 103 189-333 71-175 (232)
133 2ift_A Putative methylase HI07 99.3 6.9E-12 2.3E-16 114.2 10.0 104 190-332 54-161 (201)
134 3bwc_A Spermidine synthase; SA 99.3 3.6E-11 1.2E-15 117.1 15.6 138 189-374 95-238 (304)
135 4df3_A Fibrillarin-like rRNA/T 99.3 2.7E-11 9.2E-16 115.3 13.9 162 155-374 51-215 (233)
136 3tma_A Methyltransferase; thum 99.3 6.4E-11 2.2E-15 116.8 17.1 140 189-401 203-353 (354)
137 3hp7_A Hemolysin, putative; st 99.3 1.1E-11 3.7E-16 121.7 11.4 138 189-373 85-229 (291)
138 3dmg_A Probable ribosomal RNA 99.3 4E-12 1.4E-16 128.3 8.5 117 173-333 218-339 (381)
139 3i53_A O-methyltransferase; CO 99.3 5.4E-11 1.8E-15 115.7 16.2 143 189-375 169-320 (332)
140 2ip2_A Probable phenazine-spec 99.3 5.2E-11 1.8E-15 115.5 15.9 140 191-374 169-320 (334)
141 1tw3_A COMT, carminomycin 4-O- 99.3 4E-11 1.4E-15 117.5 15.0 143 189-375 183-338 (360)
142 3htx_A HEN1; HEN1, small RNA m 99.3 1.7E-10 5.7E-15 126.9 21.1 149 189-374 721-896 (950)
143 3tfw_A Putative O-methyltransf 99.3 2.7E-11 9.1E-16 113.9 13.0 105 189-334 63-170 (248)
144 3lbf_A Protein-L-isoaspartate 99.3 2.5E-11 8.7E-16 109.4 12.2 109 173-332 64-172 (210)
145 2esr_A Methyltransferase; stru 99.3 9.7E-12 3.3E-16 109.2 8.7 103 189-332 31-136 (177)
146 3fzg_A 16S rRNA methylase; met 99.3 6.4E-12 2.2E-16 117.3 7.8 155 163-374 28-185 (200)
147 2yvl_A TRMI protein, hypotheti 99.3 1.1E-10 3.6E-15 107.5 15.9 136 171-372 76-211 (248)
148 3bzb_A Uncharacterized protein 99.3 7.9E-11 2.7E-15 112.9 15.6 155 174-373 67-234 (281)
149 1p91_A Ribosomal RNA large sub 99.3 7.2E-12 2.5E-16 117.3 8.2 104 174-335 74-179 (269)
150 2fhp_A Methylase, putative; al 99.3 1.9E-11 6.6E-16 107.3 9.8 104 189-332 44-152 (187)
151 1o9g_A RRNA methyltransferase; 99.2 2.4E-11 8.1E-16 113.4 10.9 136 189-332 51-212 (250)
152 4hc4_A Protein arginine N-meth 99.2 2.1E-11 7.3E-16 123.3 11.3 118 165-331 65-186 (376)
153 2y1w_A Histone-arginine methyl 99.2 2.9E-11 1E-15 119.6 12.0 100 189-331 50-152 (348)
154 2ozv_A Hypothetical protein AT 99.2 2E-10 6.9E-15 108.9 17.3 133 189-374 36-192 (260)
155 3duw_A OMT, O-methyltransferas 99.2 4.8E-11 1.7E-15 108.7 12.5 107 189-336 58-169 (223)
156 3uwp_A Histone-lysine N-methyl 99.2 2.7E-11 9.1E-16 124.6 11.4 113 189-333 173-287 (438)
157 2fpo_A Methylase YHHF; structu 99.2 3.7E-11 1.3E-15 109.4 10.9 101 190-332 55-158 (202)
158 3tr6_A O-methyltransferase; ce 99.2 3.4E-11 1.2E-15 109.7 10.5 113 174-333 55-173 (225)
159 3id6_C Fibrillarin-like rRNA/T 99.2 4.1E-10 1.4E-14 106.9 18.2 177 156-402 51-231 (232)
160 2h00_A Methyltransferase 10 do 99.2 2.4E-11 8.2E-16 113.3 9.5 148 189-374 65-236 (254)
161 1vbf_A 231AA long hypothetical 99.2 6.6E-11 2.3E-15 108.1 12.1 109 171-332 55-163 (231)
162 3dr5_A Putative O-methyltransf 99.2 4.6E-11 1.6E-15 111.2 11.2 121 173-339 43-167 (221)
163 3reo_A (ISO)eugenol O-methyltr 99.2 2.1E-10 7.2E-15 114.2 16.7 145 175-374 191-353 (368)
164 1wy7_A Hypothetical protein PH 99.2 3.7E-10 1.3E-14 101.5 16.6 121 189-373 49-172 (207)
165 3dxy_A TRNA (guanine-N(7)-)-me 99.2 3E-11 1E-15 112.2 9.7 104 189-332 34-148 (218)
166 4a6d_A Hydroxyindole O-methylt 99.2 6.6E-10 2.3E-14 110.1 19.6 139 189-374 179-332 (353)
167 3p9c_A Caffeic acid O-methyltr 99.2 3.3E-10 1.1E-14 112.7 16.7 145 175-374 189-351 (364)
168 3dou_A Ribosomal RNA large sub 99.2 2.8E-10 9.6E-15 103.6 14.4 152 173-403 12-182 (191)
169 3lst_A CALO1 methyltransferase 99.2 3.3E-10 1.1E-14 111.3 15.2 138 189-375 184-335 (348)
170 3tm4_A TRNA (guanine N2-)-meth 99.2 4.8E-10 1.7E-14 112.1 16.7 141 189-402 217-367 (373)
171 3c3p_A Methyltransferase; NP_9 99.2 8.4E-11 2.9E-15 106.6 10.1 100 189-332 56-158 (210)
172 3lec_A NADB-rossmann superfami 99.2 5.2E-10 1.8E-14 106.3 16.0 135 175-375 12-148 (230)
173 2wa2_A Non-structural protein 99.2 3.1E-11 1E-15 116.9 7.6 100 189-332 82-191 (276)
174 3kr9_A SAM-dependent methyltra 99.2 6.7E-10 2.3E-14 105.2 16.5 134 175-374 6-141 (225)
175 2igt_A SAM dependent methyltra 99.2 4.1E-10 1.4E-14 111.5 15.7 133 189-374 153-302 (332)
176 3ckk_A TRNA (guanine-N(7)-)-me 99.2 6E-11 2.1E-15 111.5 9.1 109 189-332 46-166 (235)
177 2yxe_A Protein-L-isoaspartate 99.2 1.7E-10 5.7E-15 104.3 11.4 110 172-332 63-175 (215)
178 2pjd_A Ribosomal RNA small sub 99.2 6.8E-11 2.3E-15 116.4 9.4 114 174-335 184-304 (343)
179 1fp2_A Isoflavone O-methyltran 99.2 1.9E-10 6.4E-15 113.1 12.5 133 189-374 188-339 (352)
180 1u2z_A Histone-lysine N-methyl 99.1 1.1E-10 3.7E-15 120.3 10.9 128 172-333 228-358 (433)
181 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.7E-10 5.7E-15 114.4 11.6 145 176-374 198-358 (372)
182 2gpy_A O-methyltransferase; st 99.1 1.2E-10 4.3E-15 107.1 9.5 103 189-332 54-158 (233)
183 1i9g_A Hypothetical protein RV 99.1 1.1E-10 3.9E-15 109.8 9.5 140 170-372 83-226 (280)
184 3b3j_A Histone-arginine methyl 99.1 1.1E-10 3.9E-15 121.1 10.2 100 189-331 158-260 (480)
185 4dcm_A Ribosomal RNA large sub 99.1 2.8E-10 9.7E-15 114.4 12.5 117 175-334 211-334 (375)
186 1ne2_A Hypothetical protein TA 99.1 1E-09 3.6E-14 98.4 14.8 113 189-372 51-166 (200)
187 2plw_A Ribosomal RNA methyltra 99.1 2.5E-10 8.7E-15 101.9 10.7 46 173-221 9-58 (201)
188 1sui_A Caffeoyl-COA O-methyltr 99.1 2E-10 6.8E-15 108.4 10.4 112 174-332 70-188 (247)
189 3gnl_A Uncharacterized protein 99.1 1E-09 3.4E-14 105.3 15.3 134 175-374 12-147 (244)
190 3cbg_A O-methyltransferase; cy 99.1 5.4E-10 1.9E-14 103.7 13.1 103 189-332 72-180 (232)
191 2bm8_A Cephalosporin hydroxyla 99.1 7.3E-11 2.5E-15 110.7 6.8 122 190-371 82-214 (236)
192 3r3h_A O-methyltransferase, SA 99.1 6.3E-11 2.2E-15 111.5 6.3 103 189-332 60-168 (242)
193 1nv8_A HEMK protein; class I a 99.1 4E-10 1.4E-14 108.9 11.9 101 189-332 123-247 (284)
194 2avd_A Catechol-O-methyltransf 99.1 4.6E-10 1.6E-14 102.4 11.7 105 189-334 69-179 (229)
195 1dl5_A Protein-L-isoaspartate 99.1 3.5E-10 1.2E-14 110.0 11.4 113 173-336 62-178 (317)
196 2hnk_A SAM-dependent O-methylt 99.1 1.2E-10 4.3E-15 107.8 7.6 103 189-332 60-179 (239)
197 2vdv_E TRNA (guanine-N(7)-)-me 99.1 2.7E-10 9.3E-15 106.3 9.9 112 189-332 49-171 (246)
198 3c3y_A Pfomt, O-methyltransfer 99.1 4.9E-10 1.7E-14 104.7 10.8 113 173-332 60-179 (237)
199 2pbf_A Protein-L-isoaspartate 99.1 2.4E-10 8.2E-15 104.3 8.4 101 189-332 80-191 (227)
200 1af7_A Chemotaxis receptor met 99.1 1.6E-10 5.3E-15 112.1 7.5 129 189-331 105-249 (274)
201 4azs_A Methyltransferase WBDD; 99.1 1.9E-10 6.5E-15 121.2 8.6 101 189-329 66-168 (569)
202 3adn_A Spermidine synthase; am 99.1 3.9E-10 1.3E-14 110.0 10.1 108 189-332 83-196 (294)
203 2ih2_A Modification methylase 99.0 6.7E-09 2.3E-13 103.4 17.1 130 172-368 25-186 (421)
204 1zg3_A Isoflavanone 4'-O-methy 99.0 1.4E-09 4.9E-14 107.0 12.1 134 189-374 193-345 (358)
205 1i1n_A Protein-L-isoaspartate 99.0 9.3E-10 3.2E-14 100.3 10.0 101 189-332 77-180 (226)
206 1jg1_A PIMT;, protein-L-isoasp 99.0 1.1E-09 3.7E-14 101.2 10.5 108 174-332 79-187 (235)
207 2b78_A Hypothetical protein SM 99.0 1.2E-09 4E-14 110.0 11.4 140 189-381 212-367 (385)
208 2qm3_A Predicted methyltransfe 99.0 5.4E-09 1.9E-13 104.3 15.8 125 189-372 172-305 (373)
209 2nyu_A Putative ribosomal RNA 99.0 1.2E-09 4.2E-14 96.8 9.8 94 189-332 22-143 (196)
210 1xj5_A Spermidine synthase 1; 99.0 2E-09 6.7E-14 106.9 12.1 124 170-333 105-234 (334)
211 1r18_A Protein-L-isoaspartate( 99.0 9.7E-10 3.3E-14 100.9 9.1 104 189-335 84-196 (227)
212 3k6r_A Putative transferase PH 99.0 2.1E-09 7.2E-14 104.6 11.8 146 159-373 108-254 (278)
213 1zq9_A Probable dimethyladenos 99.0 4.1E-09 1.4E-13 101.7 13.7 112 174-331 16-144 (285)
214 1uir_A Polyamine aminopropyltr 99.0 8.8E-10 3E-14 107.9 9.0 108 189-332 77-193 (314)
215 2pt6_A Spermidine synthase; tr 99.0 5.7E-09 2E-13 102.7 14.6 107 189-332 116-228 (321)
216 3gjy_A Spermidine synthase; AP 99.0 1.4E-09 4.9E-14 107.8 10.2 103 190-332 90-198 (317)
217 1ixk_A Methyltransferase; open 99.0 4.5E-09 1.5E-13 102.8 13.3 130 189-373 118-272 (315)
218 3giw_A Protein of unknown func 99.0 3.5E-09 1.2E-13 103.3 12.3 172 150-372 43-243 (277)
219 1mjf_A Spermidine synthase; sp 99.0 1.1E-09 3.7E-14 105.4 8.4 111 189-332 75-191 (281)
220 2b25_A Hypothetical protein; s 99.0 1.6E-09 5.4E-14 105.8 9.7 129 170-335 89-220 (336)
221 2oxt_A Nucleoside-2'-O-methylt 99.0 7.1E-10 2.4E-14 106.6 7.1 100 189-332 74-183 (265)
222 2i7c_A Spermidine synthase; tr 98.9 3.1E-09 1.1E-13 102.4 11.0 107 189-332 78-190 (283)
223 2o07_A Spermidine synthase; st 98.9 2.3E-09 8E-14 104.8 10.3 107 189-332 95-207 (304)
224 3sso_A Methyltransferase; macr 98.9 1.3E-09 4.4E-14 111.8 8.2 146 170-369 201-360 (419)
225 1iy9_A Spermidine synthase; ro 98.9 1.9E-09 6.5E-14 103.6 8.8 107 189-332 75-187 (275)
226 1inl_A Spermidine synthase; be 98.9 2.2E-09 7.5E-14 104.2 9.3 107 189-332 90-203 (296)
227 3a27_A TYW2, uncharacterized p 98.9 2.5E-09 8.5E-14 102.3 9.0 97 189-332 119-217 (272)
228 4dmg_A Putative uncharacterize 98.9 1.6E-08 5.4E-13 102.6 15.1 102 189-332 214-324 (393)
229 3frh_A 16S rRNA methylase; met 98.9 7E-08 2.4E-12 92.9 18.1 152 163-374 85-239 (253)
230 2b2c_A Spermidine synthase; be 98.9 2.3E-09 7.8E-14 105.6 8.0 107 189-332 108-220 (314)
231 2p41_A Type II methyltransfera 98.9 7.5E-09 2.6E-13 101.4 11.5 97 189-332 82-189 (305)
232 3c0k_A UPF0064 protein YCCW; P 98.9 2E-08 6.7E-13 100.9 14.1 107 189-332 220-337 (396)
233 2okc_A Type I restriction enzy 98.9 3E-08 1E-12 101.2 15.6 119 173-335 158-308 (445)
234 2h1r_A Dimethyladenosine trans 98.9 9.1E-09 3.1E-13 100.0 11.2 96 189-328 42-153 (299)
235 2f8l_A Hypothetical protein LM 98.9 2.4E-08 8.2E-13 98.2 13.9 126 189-370 130-280 (344)
236 2cmg_A Spermidine synthase; tr 98.8 7.1E-09 2.4E-13 99.4 8.8 98 189-332 72-169 (262)
237 1qam_A ERMC' methyltransferase 98.8 3.7E-08 1.3E-12 92.8 13.2 53 173-228 17-69 (244)
238 2as0_A Hypothetical protein PH 98.8 8.8E-09 3E-13 103.3 9.1 106 189-332 217-333 (396)
239 3ajd_A Putative methyltransfer 98.8 1.3E-08 4.4E-13 97.1 9.0 133 189-373 83-238 (274)
240 1wxx_A TT1595, hypothetical pr 98.8 5.2E-08 1.8E-12 97.4 13.2 104 190-332 210-323 (382)
241 3v97_A Ribosomal RNA large sub 98.8 2.4E-08 8.1E-13 108.3 10.9 140 189-384 539-692 (703)
242 1yub_A Ermam, rRNA methyltrans 98.7 2.7E-09 9.3E-14 100.0 2.7 99 189-332 29-143 (245)
243 2yx1_A Hypothetical protein MJ 98.7 2.2E-08 7.4E-13 98.8 9.0 120 189-374 195-315 (336)
244 2xyq_A Putative 2'-O-methyl tr 98.7 2.6E-08 8.7E-13 97.5 8.9 111 189-373 63-194 (290)
245 2yxl_A PH0851 protein, 450AA l 98.6 2.4E-07 8E-12 94.9 13.9 131 189-372 259-415 (450)
246 3ldu_A Putative methylase; str 98.6 1.3E-07 4.5E-12 95.4 11.5 100 189-330 195-340 (385)
247 3k0b_A Predicted N6-adenine-sp 98.6 1.8E-07 6E-12 94.9 11.6 101 189-331 201-347 (393)
248 3lcv_B Sisomicin-gentamicin re 98.6 9.4E-08 3.2E-12 93.2 8.8 156 163-374 111-270 (281)
249 3ldg_A Putative uncharacterize 98.6 4.7E-07 1.6E-11 91.6 13.8 101 189-331 194-340 (384)
250 3m4x_A NOL1/NOP2/SUN family pr 98.6 2.5E-07 8.5E-12 95.8 11.3 130 189-372 105-259 (456)
251 3gru_A Dimethyladenosine trans 98.6 3.4E-07 1.1E-11 89.7 11.6 85 174-305 38-122 (295)
252 2jjq_A Uncharacterized RNA met 98.5 5.6E-07 1.9E-11 92.0 13.4 95 189-332 290-385 (425)
253 1sqg_A SUN protein, FMU protei 98.5 2.5E-07 8.4E-12 94.0 10.1 130 189-372 246-400 (429)
254 2frx_A Hypothetical protein YE 98.5 1.7E-07 5.9E-12 97.3 8.8 103 189-332 117-244 (479)
255 3fut_A Dimethyladenosine trans 98.5 7.2E-07 2.5E-11 86.3 11.7 97 174-319 35-133 (271)
256 3m6w_A RRNA methylase; rRNA me 98.5 1.9E-07 6.4E-12 97.0 7.2 129 189-372 101-255 (464)
257 1uwv_A 23S rRNA (uracil-5-)-me 98.4 1.2E-06 4.2E-11 89.2 13.0 124 189-374 286-412 (433)
258 3b5i_A S-adenosyl-L-methionine 98.4 7.5E-06 2.6E-10 82.8 17.0 65 312-376 203-298 (374)
259 2qfm_A Spermine synthase; sper 98.4 5.7E-07 2E-11 90.8 8.5 113 189-332 188-312 (364)
260 3tqs_A Ribosomal RNA small sub 98.4 9.7E-07 3.3E-11 84.4 9.7 40 189-228 29-68 (255)
261 3bt7_A TRNA (uracil-5-)-methyl 98.3 7.6E-07 2.6E-11 88.7 8.4 110 174-332 202-324 (369)
262 2dul_A N(2),N(2)-dimethylguano 98.3 7.2E-07 2.5E-11 90.0 7.3 112 190-331 48-161 (378)
263 2ar0_A M.ecoki, type I restric 98.3 1.7E-06 5.7E-11 91.1 10.0 123 174-335 157-313 (541)
264 4gqb_A Protein arginine N-meth 98.3 9.4E-07 3.2E-11 95.0 7.7 118 170-331 336-464 (637)
265 3v97_A Ribosomal RNA large sub 98.3 5E-06 1.7E-10 90.1 13.4 104 189-331 190-344 (703)
266 3khk_A Type I restriction-modi 98.3 8.6E-06 2.9E-10 85.9 14.9 155 191-403 246-447 (544)
267 1qyr_A KSGA, high level kasuga 98.2 3.7E-06 1.3E-10 80.2 9.2 38 189-228 21-60 (252)
268 3lkd_A Type I restriction-modi 98.2 3.7E-05 1.3E-09 81.1 17.1 132 189-368 221-381 (542)
269 2r6z_A UPF0341 protein in RSP 98.2 9.9E-07 3.4E-11 84.4 4.2 40 189-228 83-129 (258)
270 3ftd_A Dimethyladenosine trans 98.1 9.3E-06 3.2E-10 77.1 10.4 52 174-228 19-71 (249)
271 3uzu_A Ribosomal RNA small sub 98.1 8.1E-06 2.8E-10 79.1 9.4 40 189-228 42-85 (279)
272 2efj_A 3,7-dimethylxanthine me 98.1 4.1E-05 1.4E-09 77.8 14.2 98 279-376 131-292 (384)
273 3o4f_A Spermidine synthase; am 98.1 1.4E-05 4.7E-10 78.6 10.1 108 189-332 83-196 (294)
274 1m6y_A S-adenosyl-methyltransf 98.1 7.3E-06 2.5E-10 80.3 8.2 40 189-228 26-67 (301)
275 3axs_A Probable N(2),N(2)-dime 98.1 5.3E-06 1.8E-10 84.3 7.3 99 189-331 52-155 (392)
276 2qy6_A UPF0209 protein YFCK; s 98.0 1E-05 3.6E-10 77.5 8.8 147 189-374 60-233 (257)
277 1m6e_X S-adenosyl-L-methionnin 98.0 1.7E-05 5.7E-10 79.9 10.4 148 189-374 51-278 (359)
278 3ua3_A Protein arginine N-meth 98.0 1E-05 3.5E-10 87.9 9.2 103 189-331 409-531 (745)
279 2oyr_A UPF0341 protein YHIQ; a 98.0 4E-06 1.4E-10 80.6 5.1 104 191-328 90-194 (258)
280 3ll7_A Putative methyltransfer 97.9 1E-05 3.5E-10 82.8 6.9 40 190-229 94-133 (410)
281 2k4m_A TR8_protein, UPF0146 pr 97.9 1.8E-05 6.2E-10 70.9 7.3 46 173-223 24-71 (153)
282 3s1s_A Restriction endonucleas 97.9 5.1E-05 1.8E-09 83.6 12.3 138 189-372 321-492 (878)
283 2b9e_A NOL1/NOP2/SUN domain fa 97.9 7.3E-05 2.5E-09 73.3 11.1 40 189-228 102-144 (309)
284 3cvo_A Methyltransferase-like 97.6 0.00041 1.4E-08 64.5 11.9 99 190-332 31-152 (202)
285 3c6k_A Spermine synthase; sper 97.6 0.0001 3.5E-09 74.8 8.3 113 189-332 205-329 (381)
286 2zig_A TTHA0409, putative modi 97.5 0.0002 6.9E-09 69.1 7.5 54 174-231 224-277 (297)
287 3evf_A RNA-directed RNA polyme 97.4 0.00052 1.8E-08 66.9 9.9 115 170-332 59-182 (277)
288 2wk1_A NOVP; transferase, O-me 97.4 0.0011 3.6E-08 64.7 11.9 158 151-332 70-242 (282)
289 4auk_A Ribosomal RNA large sub 97.3 0.0015 5E-08 66.2 11.7 121 189-371 211-335 (375)
290 3ufb_A Type I restriction-modi 97.1 0.0032 1.1E-07 66.0 12.2 40 189-228 217-271 (530)
291 1wg8_A Predicted S-adenosylmet 97.0 0.0012 4E-08 64.7 7.3 41 189-229 22-62 (285)
292 2c7p_A Modification methylase 97.0 0.025 8.4E-07 55.7 16.9 149 189-402 10-173 (327)
293 3gcz_A Polyprotein; flavivirus 96.9 0.0038 1.3E-07 61.0 9.5 72 143-223 53-126 (282)
294 3eld_A Methyltransferase; flav 96.7 0.0034 1.2E-07 61.8 7.6 74 142-223 42-117 (300)
295 2px2_A Genome polyprotein [con 96.7 0.0044 1.5E-07 60.1 8.2 107 175-332 62-181 (269)
296 1g55_A DNA cytosine methyltran 96.5 0.044 1.5E-06 54.1 14.6 39 190-228 2-43 (343)
297 3ubt_Y Modification methylase 96.4 0.094 3.2E-06 50.4 15.9 149 191-403 1-164 (331)
298 3g7u_A Cytosine-specific methy 96.2 0.046 1.6E-06 54.9 13.0 38 191-228 3-41 (376)
299 1g60_A Adenine-specific methyl 96.1 0.011 3.6E-07 55.8 7.2 51 174-228 201-251 (260)
300 4fzv_A Putative methyltransfer 95.9 0.03 1E-06 56.1 9.9 108 189-331 148-281 (359)
301 3r24_A NSP16, 2'-O-methyl tran 95.6 0.029 1E-06 55.6 8.4 91 280-402 156-257 (344)
302 3qv2_A 5-cytosine DNA methyltr 95.4 0.12 4E-06 51.0 11.8 40 189-228 9-52 (327)
303 1rjd_A PPM1P, carboxy methyl t 95.3 0.24 8.1E-06 48.9 13.8 158 189-369 97-281 (334)
304 3vyw_A MNMC2; tRNA wobble urid 95.3 0.01 3.6E-07 58.5 3.8 72 278-374 168-246 (308)
305 3lkz_A Non-structural protein 94.8 0.074 2.5E-06 52.6 8.3 134 142-332 55-202 (321)
306 4h0n_A DNMT2; SAH binding, tra 94.8 0.3 1E-05 48.1 12.9 37 191-227 4-43 (333)
307 1pqw_A Polyketide synthase; ro 94.7 0.024 8.1E-07 50.3 4.3 37 189-225 38-77 (198)
308 2dph_A Formaldehyde dismutase; 94.5 0.029 1E-06 55.6 4.9 40 189-228 185-227 (398)
309 1pl8_A Human sorbitol dehydrog 94.3 0.1 3.4E-06 50.9 8.1 39 189-227 171-212 (356)
310 1f8f_A Benzyl alcohol dehydrog 94.3 0.047 1.6E-06 53.5 5.6 40 189-228 190-232 (371)
311 3me5_A Cytosine-specific methy 94.3 0.67 2.3E-05 48.2 14.5 53 175-227 70-126 (482)
312 3m6i_A L-arabinitol 4-dehydrog 94.2 0.061 2.1E-06 52.4 6.2 40 189-228 179-221 (363)
313 1v3u_A Leukotriene B4 12- hydr 94.1 0.13 4.5E-06 49.3 8.1 39 189-227 145-186 (333)
314 3s2e_A Zinc-containing alcohol 94.0 0.033 1.1E-06 53.8 3.8 40 189-228 166-207 (340)
315 4ej6_A Putative zinc-binding d 93.8 0.059 2E-06 53.1 5.3 40 189-228 182-224 (370)
316 3two_A Mannitol dehydrogenase; 93.8 0.14 4.7E-06 49.6 7.8 39 189-227 176-216 (348)
317 3p8z_A Mtase, non-structural p 93.5 0.41 1.4E-05 46.1 10.3 135 142-332 40-184 (267)
318 3fpc_A NADP-dependent alcohol 93.5 0.062 2.1E-06 52.2 4.8 40 189-228 166-208 (352)
319 3ip1_A Alcohol dehydrogenase, 93.4 0.17 5.9E-06 50.2 7.9 41 188-228 212-255 (404)
320 1uuf_A YAHK, zinc-type alcohol 93.3 0.12 4.2E-06 50.9 6.5 40 189-228 194-235 (369)
321 3uko_A Alcohol dehydrogenase c 93.2 0.33 1.1E-05 47.6 9.5 41 188-228 192-235 (378)
322 1e3j_A NADP(H)-dependent ketos 93.1 0.24 8.3E-06 48.0 8.4 40 189-228 168-209 (352)
323 4b7c_A Probable oxidoreductase 92.8 0.071 2.4E-06 51.3 4.0 38 189-226 149-189 (336)
324 1p0f_A NADP-dependent alcohol 92.7 0.36 1.2E-05 47.2 8.9 40 189-228 191-233 (373)
325 2eih_A Alcohol dehydrogenase; 92.7 0.11 3.7E-06 50.3 5.1 39 189-227 166-207 (343)
326 2j3h_A NADP-dependent oxidored 92.6 0.11 3.9E-06 49.9 5.2 38 189-226 155-195 (345)
327 1kol_A Formaldehyde dehydrogen 92.6 0.11 3.8E-06 51.3 5.2 40 189-228 185-227 (398)
328 3gms_A Putative NADPH:quinone 92.5 0.059 2E-06 52.1 3.0 40 188-227 143-185 (340)
329 1cdo_A Alcohol dehydrogenase; 92.5 0.36 1.2E-05 47.1 8.6 40 189-228 192-234 (374)
330 3goh_A Alcohol dehydrogenase, 92.3 0.34 1.2E-05 46.1 8.0 38 188-226 141-180 (315)
331 3uog_A Alcohol dehydrogenase; 92.2 0.22 7.6E-06 48.6 6.7 41 188-228 188-230 (363)
332 2fzw_A Alcohol dehydrogenase c 92.1 0.38 1.3E-05 46.9 8.3 40 189-228 190-232 (373)
333 2jhf_A Alcohol dehydrogenase E 92.1 0.47 1.6E-05 46.4 8.9 40 189-228 191-233 (374)
334 3nx4_A Putative oxidoreductase 92.0 0.21 7.3E-06 47.5 6.2 37 192-228 149-188 (324)
335 2d8a_A PH0655, probable L-thre 91.9 0.13 4.4E-06 49.9 4.6 39 189-227 167-208 (348)
336 3qwb_A Probable quinone oxidor 91.9 0.076 2.6E-06 51.1 2.9 40 189-228 148-190 (334)
337 1e3i_A Alcohol dehydrogenase, 91.7 0.5 1.7E-05 46.2 8.5 39 189-227 195-236 (376)
338 4eye_A Probable oxidoreductase 91.7 0.16 5.5E-06 49.2 4.9 40 188-227 158-200 (342)
339 2h6e_A ADH-4, D-arabinose 1-de 91.6 0.15 5E-06 49.4 4.6 40 189-228 170-213 (344)
340 2zig_A TTHA0409, putative modi 91.6 0.21 7.3E-06 47.8 5.6 91 277-373 21-133 (297)
341 3jyn_A Quinone oxidoreductase; 91.5 0.081 2.8E-06 50.8 2.7 40 189-228 140-182 (325)
342 1rjw_A ADH-HT, alcohol dehydro 91.0 0.18 6.1E-06 48.7 4.5 39 189-227 164-204 (339)
343 1boo_A Protein (N-4 cytosine-s 90.9 0.46 1.6E-05 46.2 7.3 41 189-229 252-292 (323)
344 1yb5_A Quinone oxidoreductase; 90.9 0.6 2.1E-05 45.4 8.2 39 188-226 169-210 (351)
345 1iz0_A Quinone oxidoreductase; 90.8 0.13 4.5E-06 48.7 3.3 37 189-225 125-164 (302)
346 3jv7_A ADH-A; dehydrogenase, n 90.8 0.2 6.9E-06 48.3 4.7 40 189-228 171-213 (345)
347 1i4w_A Mitochondrial replicati 90.7 0.44 1.5E-05 47.6 7.1 36 190-225 59-96 (353)
348 2c0c_A Zinc binding alcohol de 90.7 0.45 1.5E-05 46.5 7.1 39 189-227 163-204 (362)
349 1wly_A CAAR, 2-haloacrylate re 90.7 0.18 6.2E-06 48.4 4.2 38 189-226 145-185 (333)
350 3pvc_A TRNA 5-methylaminomethy 90.6 0.77 2.6E-05 48.9 9.4 74 277-374 149-231 (689)
351 1qor_A Quinone oxidoreductase; 90.4 0.18 6.1E-06 48.3 3.9 39 189-227 140-181 (327)
352 2dq4_A L-threonine 3-dehydroge 90.4 0.077 2.7E-06 51.3 1.3 36 189-224 164-202 (343)
353 1vj0_A Alcohol dehydrogenase, 90.3 0.3 1E-05 48.1 5.4 40 189-228 195-237 (380)
354 4a0s_A Octenoyl-COA reductase/ 90.2 0.44 1.5E-05 47.8 6.7 40 188-227 219-261 (447)
355 2j8z_A Quinone oxidoreductase; 89.9 0.3 1E-05 47.6 5.0 40 188-227 161-203 (354)
356 2zb4_A Prostaglandin reductase 89.8 0.18 6.3E-06 48.8 3.4 37 189-225 158-200 (357)
357 4dup_A Quinone oxidoreductase; 89.8 0.35 1.2E-05 47.0 5.4 41 188-228 166-209 (353)
358 1xa0_A Putative NADPH dependen 89.6 0.25 8.7E-06 47.2 4.1 34 192-225 152-188 (328)
359 3krt_A Crotonyl COA reductase; 89.4 0.46 1.6E-05 48.0 6.2 41 188-228 227-270 (456)
360 3h2s_A Putative NADH-flavin re 89.3 1.6 5.5E-05 38.4 9.0 33 192-224 2-37 (224)
361 3e8x_A Putative NAD-dependent 89.0 1.5 5.2E-05 39.2 8.7 36 189-224 20-58 (236)
362 1tt7_A YHFP; alcohol dehydroge 88.3 0.38 1.3E-05 46.0 4.4 34 192-225 153-189 (330)
363 3dqp_A Oxidoreductase YLBE; al 87.7 1.7 6E-05 38.4 8.1 29 192-221 2-34 (219)
364 3gaz_A Alcohol dehydrogenase s 87.7 0.63 2.2E-05 45.0 5.6 38 188-226 149-189 (343)
365 2b5w_A Glucose dehydrogenase; 87.6 0.46 1.6E-05 46.1 4.6 32 191-222 174-210 (357)
366 3oig_A Enoyl-[acyl-carrier-pro 87.3 1.8 6.3E-05 39.6 8.3 36 189-224 6-46 (266)
367 2cf5_A Atccad5, CAD, cinnamyl 87.3 0.98 3.3E-05 43.9 6.7 37 189-225 180-218 (357)
368 4dkj_A Cytosine-specific methy 86.9 11 0.00039 38.0 14.5 40 189-228 9-55 (403)
369 3swr_A DNA (cytosine-5)-methyl 86.8 8 0.00027 43.7 14.4 39 189-227 539-579 (1002)
370 1yqd_A Sinapyl alcohol dehydro 86.6 0.73 2.5E-05 45.1 5.4 37 189-225 187-225 (366)
371 4dvj_A Putative zinc-dependent 86.6 0.92 3.1E-05 44.3 6.1 39 189-227 171-213 (363)
372 3kkj_A Amine oxidase, flavin-c 86.2 0.41 1.4E-05 40.7 3.0 29 192-220 4-34 (336)
373 1boo_A Protein (N-4 cytosine-s 86.1 1.8 6.1E-05 42.0 7.9 88 278-373 15-117 (323)
374 2vhw_A Alanine dehydrogenase; 85.6 0.62 2.1E-05 46.3 4.3 36 189-224 167-204 (377)
375 1eg2_A Modification methylase 85.4 1.2 4.3E-05 43.3 6.3 51 174-228 231-284 (319)
376 2qrv_A DNA (cytosine-5)-methyl 85.3 7.6 0.00026 37.5 11.8 40 188-227 14-56 (295)
377 3ggo_A Prephenate dehydrogenas 85.0 6.6 0.00022 37.8 11.2 92 190-335 33-129 (314)
378 2eez_A Alanine dehydrogenase; 84.9 0.92 3.1E-05 44.8 5.2 36 189-224 165-202 (369)
379 3gqv_A Enoyl reductase; medium 84.7 0.77 2.6E-05 44.9 4.5 37 188-225 163-202 (371)
380 2oo3_A Protein involved in cat 84.7 1.3 4.4E-05 43.1 6.0 110 171-332 80-196 (283)
381 2cdc_A Glucose dehydrogenase g 84.5 1.8 6.1E-05 42.1 7.0 32 190-221 181-214 (366)
382 2vz8_A Fatty acid synthase; tr 84.5 0.3 1E-05 59.9 1.8 78 295-373 1309-1392(2512)
383 4e12_A Diketoreductase; oxidor 83.8 4 0.00014 38.4 8.9 37 191-227 5-43 (283)
384 3p2y_A Alanine dehydrogenase/p 83.8 0.72 2.5E-05 46.6 3.9 37 189-225 183-221 (381)
385 4dll_A 2-hydroxy-3-oxopropiona 83.6 4.3 0.00015 38.9 9.2 36 189-224 30-67 (320)
386 1y1p_A ARII, aldehyde reductas 83.5 12 0.00042 34.6 12.1 35 189-223 10-47 (342)
387 3g0o_A 3-hydroxyisobutyrate de 83.5 3.3 0.00011 39.2 8.2 35 190-224 7-43 (303)
388 3ew7_A LMO0794 protein; Q8Y8U8 83.1 4.5 0.00016 35.1 8.4 32 192-223 2-36 (221)
389 4e21_A 6-phosphogluconate dehy 83.0 2.7 9.2E-05 41.6 7.6 93 190-335 22-116 (358)
390 4dgk_A Phytoene dehydrogenase; 82.8 0.56 1.9E-05 46.9 2.6 31 191-221 2-34 (501)
391 3grk_A Enoyl-(acyl-carrier-pro 82.5 7.2 0.00025 36.6 10.2 35 189-223 30-69 (293)
392 1l7d_A Nicotinamide nucleotide 82.5 0.9 3.1E-05 45.1 4.0 36 189-224 171-208 (384)
393 1zcj_A Peroxisomal bifunctiona 82.4 8.6 0.00029 39.1 11.4 38 189-226 36-75 (463)
394 4dio_A NAD(P) transhydrogenase 82.4 1.1 3.9E-05 45.6 4.7 37 189-225 189-227 (405)
395 1g60_A Adenine-specific methyl 82.2 2.6 9E-05 39.3 6.9 76 279-373 6-96 (260)
396 3ce6_A Adenosylhomocysteinase; 82.1 3.8 0.00013 42.7 8.6 37 189-225 273-311 (494)
397 4ft4_B DNA (cytosine-5)-methyl 81.9 27 0.00093 37.5 15.6 43 189-233 211-260 (784)
398 2vn8_A Reticulon-4-interacting 81.5 0.84 2.9E-05 44.6 3.3 36 188-224 182-220 (375)
399 3ius_A Uncharacterized conserv 81.4 13 0.00044 33.8 11.2 30 191-222 6-39 (286)
400 3qiv_A Short-chain dehydrogena 81.4 19 0.00065 32.3 12.2 36 189-224 8-46 (253)
401 1eg2_A Modification methylase 81.3 4.8 0.00016 39.1 8.6 85 278-373 39-137 (319)
402 2f1k_A Prephenate dehydrogenas 80.9 6.9 0.00024 36.1 9.3 33 192-224 2-36 (279)
403 2hwk_A Helicase NSP2; rossman 80.7 3 0.0001 41.1 6.7 228 92-402 36-297 (320)
404 1x13_A NAD(P) transhydrogenase 80.6 0.88 3E-05 45.8 3.2 37 189-225 171-209 (401)
405 3tka_A Ribosomal RNA small sub 80.6 2.5 8.5E-05 42.3 6.3 52 174-228 45-99 (347)
406 3o26_A Salutaridine reductase; 79.9 12 0.00042 34.2 10.6 36 189-224 11-49 (311)
407 2g76_A 3-PGDH, D-3-phosphoglyc 79.9 2.4 8.3E-05 41.7 6.0 36 297-334 219-255 (335)
408 3k96_A Glycerol-3-phosphate de 79.8 7.9 0.00027 38.1 9.7 101 190-332 29-131 (356)
409 3pxx_A Carveol dehydrogenase; 79.8 6.1 0.00021 36.3 8.4 32 189-220 9-43 (287)
410 3qha_A Putative oxidoreductase 79.5 3.5 0.00012 39.1 6.8 34 191-224 16-51 (296)
411 4a2c_A Galactitol-1-phosphate 79.3 1.7 5.7E-05 41.6 4.5 40 189-228 160-202 (346)
412 3c85_A Putative glutathione-re 79.1 2.4 8.1E-05 36.8 5.1 35 190-224 39-76 (183)
413 4eez_A Alcohol dehydrogenase 1 79.1 3.9 0.00013 39.0 7.1 40 189-228 163-205 (348)
414 2ekl_A D-3-phosphoglycerate de 78.8 2 6.7E-05 41.7 4.9 32 189-222 141-176 (313)
415 3fbg_A Putative arginate lyase 78.6 1.6 5.4E-05 42.2 4.1 40 189-228 150-192 (346)
416 3gpi_A NAD-dependent epimerase 78.4 13 0.00044 34.0 10.2 29 190-220 3-35 (286)
417 3tqh_A Quinone oxidoreductase; 78.2 1.7 5.9E-05 41.3 4.2 35 189-224 152-189 (321)
418 3ps9_A TRNA 5-methylaminomethy 77.4 5.9 0.0002 41.8 8.4 138 188-372 65-237 (676)
419 2g5c_A Prephenate dehydrogenas 77.2 16 0.00053 33.8 10.5 34 192-225 3-40 (281)
420 1mv8_A GMD, GDP-mannose 6-dehy 76.7 10 0.00035 38.0 9.6 34 192-225 2-37 (436)
421 2iid_A L-amino-acid oxidase; f 76.7 2.6 8.9E-05 42.1 5.2 50 170-221 15-66 (498)
422 2duw_A Putative COA-binding pr 76.4 10 0.00035 32.4 8.3 55 296-373 69-123 (145)
423 3k6j_A Protein F01G10.3, confi 76.3 14 0.00047 38.1 10.6 34 189-222 53-88 (460)
424 3tjr_A Short chain dehydrogena 76.3 27 0.00091 32.7 12.0 37 189-225 30-69 (301)
425 2g1u_A Hypothetical protein TM 76.1 2.4 8.1E-05 36.0 4.1 35 189-223 18-54 (155)
426 3slk_A Polyketide synthase ext 76.1 0.59 2E-05 51.2 0.3 35 187-221 343-380 (795)
427 4hb9_A Similarities with proba 76.0 1.7 6E-05 41.4 3.6 29 191-219 2-32 (412)
428 1pjc_A Protein (L-alanine dehy 75.9 2.8 9.6E-05 41.2 5.1 37 189-225 166-204 (361)
429 1wwk_A Phosphoglycerate dehydr 75.7 2.9 0.0001 40.4 5.2 32 189-222 141-176 (307)
430 3llv_A Exopolyphosphatase-rela 75.4 3.3 0.00011 34.1 4.8 35 190-224 6-42 (141)
431 2uyo_A Hypothetical protein ML 75.4 11 0.00039 36.4 9.3 143 191-373 104-276 (310)
432 2bka_A CC3, TAT-interacting pr 75.3 8.3 0.00028 34.2 7.7 32 190-221 18-54 (242)
433 4hy3_A Phosphoglycerate oxidor 74.6 2.8 9.6E-05 41.9 4.8 31 189-221 175-209 (365)
434 3o38_A Short chain dehydrogena 74.5 34 0.0012 30.9 11.9 36 189-224 21-60 (266)
435 3d64_A Adenosylhomocysteinase; 74.3 5 0.00017 41.8 6.8 33 189-223 276-312 (494)
436 3lyl_A 3-oxoacyl-(acyl-carrier 74.2 43 0.0015 29.8 12.3 37 189-225 4-43 (247)
437 1v8b_A Adenosylhomocysteinase; 73.9 5.1 0.00017 41.6 6.7 33 189-223 256-292 (479)
438 3gvp_A Adenosylhomocysteinase 73.8 2.5 8.4E-05 43.6 4.2 35 189-223 219-255 (435)
439 3ond_A Adenosylhomocysteinase; 73.5 11 0.00039 39.1 9.2 36 189-224 264-301 (488)
440 4e6p_A Probable sorbitol dehyd 73.3 41 0.0014 30.4 12.1 36 189-224 7-45 (259)
441 3d4o_A Dipicolinate synthase s 72.6 16 0.00056 34.4 9.5 33 189-223 154-190 (293)
442 4e5n_A Thermostable phosphite 72.2 3.1 0.00011 40.7 4.4 31 189-221 144-178 (330)
443 4gbj_A 6-phosphogluconate dehy 72.1 22 0.00074 33.9 10.2 112 191-372 6-120 (297)
444 3ka7_A Oxidoreductase; structu 72.0 2.3 7.9E-05 41.2 3.4 30 192-221 2-33 (425)
445 2rir_A Dipicolinate synthase, 71.8 16 0.00055 34.5 9.2 33 189-223 156-192 (300)
446 3sju_A Keto reductase; short-c 71.7 49 0.0017 30.5 12.4 36 189-224 23-61 (279)
447 4a27_A Synaptic vesicle membra 71.7 1.1 3.7E-05 43.3 1.0 35 188-223 141-179 (349)
448 4a7p_A UDP-glucose dehydrogena 71.6 8.8 0.0003 39.2 7.8 36 189-224 7-44 (446)
449 2cvz_A Dehydrogenase, 3-hydrox 71.1 12 0.00043 34.3 8.1 32 192-224 3-36 (289)
450 2hcy_A Alcohol dehydrogenase 1 70.9 3.4 0.00012 39.7 4.3 38 189-226 169-209 (347)
451 3gg2_A Sugar dehydrogenase, UD 70.9 14 0.00049 37.5 9.1 35 191-225 3-39 (450)
452 3ucx_A Short chain dehydrogena 70.7 61 0.0021 29.4 12.7 36 189-224 10-48 (264)
453 3fwz_A Inner membrane protein 70.5 5.1 0.00017 33.4 4.8 36 190-225 7-44 (140)
454 3nrn_A Uncharacterized protein 70.4 2.7 9.1E-05 41.1 3.4 29 192-220 2-32 (421)
455 3c24_A Putative oxidoreductase 70.2 9.7 0.00033 35.5 7.2 34 191-224 12-48 (286)
456 3dfz_A SIRC, precorrin-2 dehyd 70.2 12 0.0004 34.9 7.6 40 180-219 21-62 (223)
457 3gvc_A Oxidoreductase, probabl 70.2 47 0.0016 30.8 11.9 36 189-224 28-66 (277)
458 3r1i_A Short-chain type dehydr 70.0 37 0.0013 31.4 11.1 36 189-224 31-69 (276)
459 3rp8_A Flavoprotein monooxygen 69.6 3.1 0.00011 40.4 3.7 33 189-221 22-56 (407)
460 4ezb_A Uncharacterized conserv 69.5 17 0.0006 34.7 9.0 31 191-221 25-58 (317)
461 3oz2_A Digeranylgeranylglycero 69.5 2.5 8.7E-05 39.8 3.0 29 192-220 6-36 (397)
462 2ew2_A 2-dehydropantoate 2-red 69.2 31 0.0011 31.7 10.4 34 191-224 4-39 (316)
463 1gdh_A D-glycerate dehydrogena 69.1 4.5 0.00015 39.3 4.7 32 189-222 145-181 (320)
464 3i4f_A 3-oxoacyl-[acyl-carrier 69.1 37 0.0013 30.6 10.7 32 190-221 7-41 (264)
465 3op4_A 3-oxoacyl-[acyl-carrier 68.9 55 0.0019 29.5 11.9 36 189-224 8-46 (248)
466 3uf0_A Short-chain dehydrogena 68.9 53 0.0018 30.2 12.0 33 189-221 30-65 (273)
467 3d1l_A Putative NADP oxidoredu 68.7 21 0.00072 32.5 9.0 35 190-224 10-47 (266)
468 4iin_A 3-ketoacyl-acyl carrier 68.2 51 0.0017 30.0 11.6 32 189-220 28-62 (271)
469 1jvb_A NAD(H)-dependent alcoho 68.0 5.8 0.0002 38.0 5.2 39 189-227 170-212 (347)
470 3av4_A DNA (cytosine-5)-methyl 67.9 71 0.0024 37.3 14.8 40 189-228 850-891 (1330)
471 4f6c_A AUSA reductase domain p 67.5 35 0.0012 33.3 10.8 33 189-222 68-104 (427)
472 3rkr_A Short chain oxidoreduct 67.4 52 0.0018 29.8 11.4 36 189-224 28-66 (262)
473 3gg9_A D-3-phosphoglycerate de 67.4 3.9 0.00013 40.5 4.0 33 189-221 159-193 (352)
474 3n58_A Adenosylhomocysteinase; 67.0 7.8 0.00027 40.2 6.1 35 189-223 246-282 (464)
475 3tfo_A Putative 3-oxoacyl-(acy 66.8 63 0.0022 29.7 12.0 35 190-224 4-41 (264)
476 4egf_A L-xylulose reductase; s 66.8 68 0.0023 29.2 12.1 37 189-225 19-58 (266)
477 3dme_A Conserved exported prot 66.6 3.4 0.00011 38.7 3.1 30 191-220 5-36 (369)
478 3pgx_A Carveol dehydrogenase; 66.0 70 0.0024 29.2 12.1 32 189-220 14-48 (280)
479 3n74_A 3-ketoacyl-(acyl-carrie 65.9 68 0.0023 28.7 11.8 36 189-224 8-46 (261)
480 3gaf_A 7-alpha-hydroxysteroid 65.8 76 0.0026 28.7 12.2 36 189-224 11-49 (256)
481 3dhn_A NAD-dependent epimerase 65.1 10 0.00035 33.2 5.9 31 191-221 5-38 (227)
482 3ged_A Short-chain dehydrogena 65.0 88 0.003 29.0 12.7 34 191-224 3-39 (247)
483 3r6d_A NAD-dependent epimerase 65.0 11 0.00036 33.2 6.0 31 192-222 7-41 (221)
484 4gde_A UDP-galactopyranose mut 64.8 3.3 0.00011 41.2 2.8 32 190-221 10-44 (513)
485 2p4q_A 6-phosphogluconate dehy 64.4 20 0.0007 36.9 8.8 121 190-372 10-132 (497)
486 4ibo_A Gluconate dehydrogenase 64.2 46 0.0016 30.6 10.5 36 189-224 25-63 (271)
487 2dbq_A Glyoxylate reductase; D 64.2 6.3 0.00022 38.4 4.7 34 189-222 149-184 (334)
488 2bcg_G Secretory pathway GDP d 63.8 3.6 0.00012 41.3 2.9 31 190-220 11-43 (453)
489 3pk0_A Short-chain dehydrogena 63.7 86 0.0029 28.4 12.3 36 189-224 9-47 (262)
490 1piw_A Hypothetical zinc-type 63.5 5.7 0.00019 38.4 4.2 39 189-227 179-219 (360)
491 3qvo_A NMRA family protein; st 63.5 5.3 0.00018 35.8 3.8 32 190-221 23-58 (236)
492 3k7m_X 6-hydroxy-L-nicotine ox 63.5 3.9 0.00013 39.7 3.1 29 192-220 3-33 (431)
493 3gk3_A Acetoacetyl-COA reducta 63.3 66 0.0022 29.2 11.3 35 189-223 24-62 (269)
494 4fc7_A Peroxisomal 2,4-dienoyl 62.8 86 0.0029 28.7 12.1 36 189-224 26-64 (277)
495 1ae1_A Tropinone reductase-I; 62.8 91 0.0031 28.4 12.4 36 189-224 20-58 (273)
496 3imf_A Short chain dehydrogena 62.8 71 0.0024 28.8 11.4 37 189-225 5-44 (257)
497 3oec_A Carveol dehydrogenase ( 62.7 71 0.0024 30.1 11.7 32 189-220 45-79 (317)
498 2zyd_A 6-phosphogluconate dehy 62.6 29 0.001 35.5 9.6 121 189-372 14-136 (480)
499 4imr_A 3-oxoacyl-(acyl-carrier 62.4 58 0.002 30.0 10.9 36 189-224 32-70 (275)
500 3dje_A Fructosyl amine: oxygen 62.3 5 0.00017 39.3 3.5 31 190-220 6-39 (438)
No 1
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.76 E-value=2.7e-18 Score=162.61 Aligned_cols=215 Identities=16% Similarity=0.127 Sum_probs=124.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
..+++.+.+.+... ..++.+|||+|||+|.++..+++.|+ .|+|+|+|..||..++-.++.. ...+..-|.+...+
T Consensus 39 ~~~~~~~~~~~~~~-~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~--~~~~d~s~~~~~~~ 115 (263)
T 2a14_A 39 KFNLECLHKTFGPG-GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKE--PGAYDWTPAVKFAC 115 (263)
T ss_dssp HHHHHHHHHHHSTT-SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTC--TTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcC--CCcccchHHHHHHH
Confidence 34556666665321 22567999999999999999999998 5999999999998877433210 00111001000000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCcee-EEecccccccCC-CCCCCCccEEEEecccCC----hhhHHHHHHHHHHhc
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFS-MCGGDFVEVYSD-PSQVGAWDAVVTCFFIDT----AHNIVEYIEIISRIL 324 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s-~~~GDF~ely~~-~~~~~~fD~VvT~FFIDt----a~Ni~~yl~~I~~~L 324 (412)
+...... .+ ++.. .....++. ++.+|+++.... +...++||+|++.+.++. .++....++.|+++|
T Consensus 116 ~~~~~~~---~~--~~~~---~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~L 187 (263)
T 2a14_A 116 ELEGNSG---RW--EEKE---EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLL 187 (263)
T ss_dssp HHTTCGG---GH--HHHH---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTE
T ss_pred hcCCCCc---ch--hhHH---HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHc
Confidence 0000000 00 0000 00001133 788898873211 112468999999986653 367788999999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccc-eEEEEEEEcC
Q 015160 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYF-TAFWTMRKKS 403 (412)
Q Consensus 325 KPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~-~~f~VarK~~ 403 (412)
||||++|-.+++--.+.. .|........++.++|+.+++++||++++.......|..+ + ..|. ..|++|||+.
T Consensus 188 KPGG~li~~~~~~~~~~~-~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~---~--~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 188 KPGGHLVTTVTLRLPSYM-VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVT---N--AANNGVCCIVARKKP 261 (263)
T ss_dssp EEEEEEEEEEESSCCEEE-ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTT---T--CCCCCEEEEEEEECC
T ss_pred CCCcEEEEEEeecCccce-eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccc---c--CCCCceEEEEEEecC
Confidence 999999975533111100 1111111245799999999999999998865433333221 1 2343 3466899975
No 2
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.76 E-value=3.3e-17 Score=155.27 Aligned_cols=176 Identities=13% Similarity=0.072 Sum_probs=122.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+...
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~---------------------------------- 113 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAK---------------------------------- 113 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHC-----------------------------------
T ss_pred CCCEEEEeCCcchHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc----------------------------------
Confidence 3569999999999999999999999999999999998776332110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc----h------
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL----Y------ 338 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLl----y------ 338 (412)
....++.++.+|+.++.. ...++||+|++...+...++...+|+.++++|||||+++-..+.. +
T Consensus 114 ----~~~~~v~~~~~d~~~~~~--~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 187 (285)
T 4htf_A 114 ----GVSDNMQFIHCAAQDVAS--HLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAG 187 (285)
T ss_dssp ----CCGGGEEEEESCGGGTGG--GCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTT
T ss_pred ----CCCcceEEEEcCHHHhhh--hcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhc
Confidence 011347899999988752 235899999998877767788899999999999999998532211 0
Q ss_pred --hh--hhccC---CCCCcccCCCHHHHHHHHHhCCCEEEEEeec--cccCCCCccc-------------------cccc
Q 015160 339 --HF--ADLYG---QEDEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPRS-------------------MMQN 390 (412)
Q Consensus 339 --h~--~~~~g---~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i--~s~Y~~d~~s-------------------m~~~ 390 (412)
.+ ..... ........++.++++++++++||+++....+ ...|..+... -+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~~ 267 (285)
T 4htf_A 188 NFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTGVRVFHDYLREKHQQRDCYEALLELETRYCRQEPYIT 267 (285)
T ss_dssp CHHHHHTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEEESSSGGGCSSTTHHHHTHHHHHHHHHHHTTSTTGGG
T ss_pred CHHHHhhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeeeEEEeeecccccccCcccHHHHHHHHHHhcCCChHHH
Confidence 00 00000 0111124579999999999999999986643 3344433211 1223
Q ss_pred ccceEEEEEEEcCc
Q 015160 391 RYFTAFWTMRKKSV 404 (412)
Q Consensus 391 ~Y~~~f~VarK~~~ 404 (412)
...-..+||||+..
T Consensus 268 ~~~~~~~varK~~~ 281 (285)
T 4htf_A 268 LGRYIHVTARKPQS 281 (285)
T ss_dssp GCSEEEEEEECCCC
T ss_pred HHhheEEEEEcCCc
Confidence 34556889999853
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.76 E-value=4.4e-18 Score=155.54 Aligned_cols=150 Identities=18% Similarity=0.125 Sum_probs=99.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..||++|+.|+|+|+|..||..|+-.... . .. ..... ...
T Consensus 22 ~~~~vLD~GCG~G~~~~~la~~g~~V~gvD~S~~~l~~a~~~~~~---~--~~----~~~~~----------~~~----- 77 (203)
T 1pjz_A 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGE---Q--PH----ITSQG----------DFK----- 77 (203)
T ss_dssp TTCEEEETTTCCSHHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS---C--SE----EEEET----------TEE-----
T ss_pred CCCEEEEeCCCCcHhHHHHHHCCCeEEEEeCCHHHHHHHHHHccC---C--cc----ccccc----------ccc-----
Confidence 467999999999999999999999999999999999877622110 0 00 00000 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCC-CCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQV-GAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~-~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
.....++.+.++|+.++.. .. ++||+|++...+. ..++...++++++++|||||+++-+. +.|..... +
T Consensus 78 ---~~~~~~v~~~~~d~~~l~~---~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~-~~~~~~~~-~ 149 (203)
T 1pjz_A 78 ---VYAAPGIEIWCGDFFALTA---RDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT-LEYDQALL-E 149 (203)
T ss_dssp ---EEECSSSEEEEECCSSSTH---HHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE-ESSCSSSS-S
T ss_pred ---cccCCccEEEECccccCCc---ccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE-EecCcccc-C
Confidence 0001247899999988642 22 6899999764332 23456789999999999999833211 11211111 1
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
++ .+.++.+|+++++.+ ||+++...
T Consensus 150 ~~---~~~~~~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 150 GP---PFSVPQTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp SC---CCCCCHHHHHHTSCS-SEEEEEEE
T ss_pred CC---CCCCCHHHHHHHhcC-CcEEEEec
Confidence 12 356899999999988 99988754
No 4
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.75 E-value=4.3e-17 Score=146.90 Aligned_cols=196 Identities=13% Similarity=0.132 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHhcCcccC----hhHHh-hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCC
Q 015160 146 DKVRCIIRNIVRDWAAEG----KTERD-QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFS 220 (412)
Q Consensus 146 ~kv~s~L~q~~RDWS~eG----~~ER~-~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S 220 (412)
++++....+....|.... -..|. .....+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s 83 (227)
T 3e8s_A 11 DALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGR-------QPERVLDLGCGEGWLLRALADRGIEAVGVDGD 83 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHT-------CCSEEEEETCTTCHHHHHHHTTTCEEEEEESC
T ss_pred HHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcC-------CCCEEEEeCCCCCHHHHHHHHCCCEEEEEcCC
Confidence 455556666666665421 11111 1222344444432 45799999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCC-CCCCcc
Q 015160 221 YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPS-QVGAWD 299 (412)
Q Consensus 221 ~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~-~~~~fD 299 (412)
..|+..++.. .+..+..+|+.++...+. ..++||
T Consensus 84 ~~~~~~a~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~fD 118 (227)
T 3e8s_A 84 RTLVDAARAA---------------------------------------------GAGEVHLASYAQLAEAKVPVGKDYD 118 (227)
T ss_dssp HHHHHHHHHT---------------------------------------------CSSCEEECCHHHHHTTCSCCCCCEE
T ss_pred HHHHHHHHHh---------------------------------------------cccccchhhHHhhcccccccCCCcc
Confidence 9999765511 013456667666521111 235699
Q ss_pred EEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhc----------c-C---C-CCCcccCCCHHHHHHHHH
Q 015160 300 AVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADL----------Y-G---Q-EDEMSIELSLEDVKRVAL 364 (412)
Q Consensus 300 ~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~----------~-g---~-~~~~~ieLS~EEL~~ll~ 364 (412)
+|++.+.+. ..+...+++.++++|||||++|-..|..+..... + + . .+.....++.++++++++
T Consensus 119 ~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (227)
T 3e8s_A 119 LICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLNALD 197 (227)
T ss_dssp EEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHHHHH
T ss_pred EEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHHHHH
Confidence 999988777 6778899999999999999999643322111100 0 0 0 011123459999999999
Q ss_pred hCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 015160 365 HYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 365 ~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
++||+++.......+-...+ ...|+||+|+
T Consensus 198 ~aGf~~~~~~~~~~~~~~~~--------~~~~~va~k~ 227 (227)
T 3e8s_A 198 MAGLRLVSLQEPQHPQSAVP--------QSLLMVAERH 227 (227)
T ss_dssp HTTEEEEEEECCCCTTCSSC--------SCEEEEEEEC
T ss_pred HcCCeEEEEecCCCCCCCCc--------eeEEEEeecC
Confidence 99999988543111111112 3567788874
No 5
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.75 E-value=2.5e-17 Score=149.04 Aligned_cols=190 Identities=16% Similarity=0.085 Sum_probs=123.6
Q ss_pred HHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHH
Q 015160 147 KVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMIC 226 (412)
Q Consensus 147 kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~ 226 (412)
.++.........|...... .+.+..+...++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..
T Consensus 12 ~~~~~~~~~~~~y~~~~~~------~~~~~~~~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~ 80 (211)
T 3e23_A 12 DTLRFYRGNATAYAERQPR------SATLTKFLGELP-----AGAKILELGCGAGYQAEAMLAAGFDVDATDGSPELAAE 80 (211)
T ss_dssp HHHHHHHHSHHHHTTCCCC------CHHHHHHHTTSC-----TTCEEEESSCTTSHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHHhhccch------hHHHHHHHHhcC-----CCCcEEEECCCCCHHHHHHHHcCCeEEEECCCHHHHHH
Confidence 3344444444445443222 234455554443 45699999999999999999999999999999999976
Q ss_pred HHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc
Q 015160 227 SSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF 306 (412)
Q Consensus 227 s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF 306 (412)
++..+ ++.+..+|+.++. ..++||+|++...
T Consensus 81 a~~~~---------------------------------------------~~~~~~~d~~~~~----~~~~fD~v~~~~~ 111 (211)
T 3e23_A 81 ASRRL---------------------------------------------GRPVRTMLFHQLD----AIDAYDAVWAHAC 111 (211)
T ss_dssp HHHHH---------------------------------------------TSCCEECCGGGCC----CCSCEEEEEECSC
T ss_pred HHHhc---------------------------------------------CCceEEeeeccCC----CCCcEEEEEecCc
Confidence 55211 0345667887754 2589999998765
Q ss_pred cCCh--hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCC-CEEEEEe-eccccCCC
Q 015160 307 IDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKEK-TIETTYTT 382 (412)
Q Consensus 307 IDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~G-Feii~e~-~i~s~Y~~ 382 (412)
+... +++..+|+.++++|||||++|-..+....... .........++.++++++++++| |+++... .....|..
T Consensus 112 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~~~~~~ 189 (211)
T 3e23_A 112 LLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEGR--DKLARYYNYPSEEWLRARYAEAGTWASVAVESSEGKGFDQ 189 (211)
T ss_dssp GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCEE--CTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEEEECTTS
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcccc--cccchhccCCCHHHHHHHHHhCCCcEEEEEEeccCCCCCC
Confidence 5433 47889999999999999999853221110000 00111123579999999999999 9999855 33344443
Q ss_pred CcccccccccceEEEEEEEcCccc
Q 015160 383 NPRSMMQNRYFTAFWTMRKKSVTI 406 (412)
Q Consensus 383 d~~sm~~~~Y~~~f~VarK~~~~~ 406 (412)
. +..+.++.++++...
T Consensus 190 ~--------~~~wl~~~~~~~~~~ 205 (211)
T 3e23_A 190 E--------LAQFLHVSVRKPELE 205 (211)
T ss_dssp C--------EEEEEEEEEECCCC-
T ss_pred C--------CceEEEEEEecCccc
Confidence 2 234455555554443
No 6
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.75 E-value=5.1e-17 Score=149.02 Aligned_cols=152 Identities=18% Similarity=0.235 Sum_probs=115.0
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+++.|.++++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 41 ~~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 95 (242)
T 3l8d_A 41 STIIPFFEQYVK-----KEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERG-------------------- 95 (242)
T ss_dssp TTHHHHHHHHSC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHTTT--------------------
T ss_pred HHHHHHHHHHcC-----CCCeEEEEcCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhc--------------------
Confidence 357888888775 4569999999999999999999999999999999987655110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...++.+..+|+.++.. ..++||+|++...+...++...+++.++++|||||+++
T Consensus 96 ----------------------~~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 150 (242)
T 3l8d_A 96 ----------------------EGPDLSFIKGDLSSLPF---ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYAC 150 (242)
T ss_dssp ----------------------CBTTEEEEECBTTBCSS---CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------------ccCCceEEEcchhcCCC---CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEE
Confidence 01237889999887632 36899999998877777888999999999999999998
Q ss_pred Ee--cCcchh----hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NL--GPLLYH----FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~--GPLlyh----~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-. +|.... +....+. +.....++.++++++++++||+++...
T Consensus 151 i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 151 IAILGPTAKPRENSYPRLYGK-DVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp EEEECTTCGGGGGGGGGGGTC-CCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred EEEcCCcchhhhhhhhhhccc-cccccCCCHHHHHHHHHHcCCEEEEee
Confidence 53 222111 1111111 111234799999999999999999865
No 7
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.75 E-value=1.1e-17 Score=152.53 Aligned_cols=152 Identities=15% Similarity=0.153 Sum_probs=112.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.+..+++.|.... ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 29 ~~~~~~~~l~~~~------~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------ 84 (250)
T 2p7i_A 29 MHPFMVRAFTPFF------RPGNLLELGSFKGDFTSRLQEHFNDITCVEASEEAISHAQGRL------------------ 84 (250)
T ss_dssp HHHHHHHHHGGGC------CSSCEEEESCTTSHHHHHHTTTCSCEEEEESCHHHHHHHHHHS------------------
T ss_pred HHHHHHHHHHhhc------CCCcEEEECCCCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhh------------------
Confidence 3455666666543 3458999999999999999999999999999999997665110
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHH-HhccCCc
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS-RILKDGG 328 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~-~~LKPGG 328 (412)
+ .++.+..+|+.++.. .++||+|++...|...++...+|++++ ++|||||
T Consensus 85 ---------------~----------~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 85 ---------------K----------DGITYIHSRFEDAQL----PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGG 135 (250)
T ss_dssp ---------------C----------SCEEEEESCGGGCCC----SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEE
T ss_pred ---------------h----------CCeEEEEccHHHcCc----CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCC
Confidence 0 026789999988632 578999999887777777889999999 9999999
Q ss_pred EEEEecCcchhhhhc----cCC------------CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 329 VWINLGPLLYHFADL----YGQ------------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 329 ~wIN~GPLlyh~~~~----~g~------------~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+++-..|........ .+. .......++.++++++++++||++++..
T Consensus 136 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 197 (250)
T 2p7i_A 136 RLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRS 197 (250)
T ss_dssp EEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEe
Confidence 998644432111000 000 0011235799999999999999998854
No 8
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.75 E-value=1.1e-17 Score=155.12 Aligned_cols=199 Identities=15% Similarity=0.192 Sum_probs=121.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..+++.|+ .|+|+|+|..|+..++..+........+ -|++...++........ ++.
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-----~~~ 128 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDW--SPVVTYVCDLEGNRMKG-----PEK 128 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCC--HHHHHHHHHHTTTCSCH-----HHH
T ss_pred CCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccc--hhhhhhhhcccccccch-----HHH
Confidence 567999999999999999999999 9999999999998776433211000000 00000000000000000 000
Q ss_pred CCCCCCCCCce-eEEecccccccCCC-CCCCCccEEEEecccC----ChhhHHHHHHHHHHhccCCcEEEEecCcchhhh
Q 015160 268 HPASAGITEGF-SMCGGDFVEVYSDP-SQVGAWDAVVTCFFID----TAHNIVEYIEIISRILKDGGVWINLGPLLYHFA 341 (412)
Q Consensus 268 ~p~~~~~~~~~-s~~~GDF~ely~~~-~~~~~fD~VvT~FFID----ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~ 341 (412)
. .....++ .+..+|+.+....+ ...++||+|++.+.+. ..++...+|+.++++|||||++|-..++...+.
T Consensus 129 ~---~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~ 205 (265)
T 2i62_A 129 E---EKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYY 205 (265)
T ss_dssp H---HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE
T ss_pred H---HHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceE
Confidence 0 0000126 78889988753211 1127899999988766 667889999999999999999986443321111
Q ss_pred hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEE-EEEEEcC
Q 015160 342 DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAF-WTMRKKS 403 (412)
Q Consensus 342 ~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f-~VarK~~ 403 (412)
.. +........++.++++++++++||+++........|.... ..|...| ++|||+.
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~-----~~~~~~~~~~a~K~~ 262 (265)
T 2i62_A 206 MI-GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTT-----SNNEGLFSLVGRKPG 262 (265)
T ss_dssp EE-TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTT-----BCCCCEEEEEEECCC
T ss_pred Ec-CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccc-----cccceEEEEEecccc
Confidence 11 1111113457999999999999999998775555554322 4455555 4777764
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.75 E-value=4.5e-17 Score=156.04 Aligned_cols=143 Identities=17% Similarity=0.147 Sum_probs=100.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCcccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 264 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~i 264 (412)
++.+|||+|||+|+++..||++ |+.|+|+|+|..||..|+-.+...
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~------------------------------ 119 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY------------------------------ 119 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS------------------------------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh------------------------------
Confidence 5679999999999999999986 779999999999998776332110
Q ss_pred CCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcc-----
Q 015160 265 PDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL----- 337 (412)
Q Consensus 265 PDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLl----- 337 (412)
....++.++.+|+.++.. +.||+|++.+.+. ..++...+|++|+++|||||++|..-+..
T Consensus 120 --------~~~~~v~~~~~D~~~~~~-----~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~ 186 (261)
T 4gek_A 120 --------KAPTPVDVIEGDIRDIAI-----ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAK 186 (261)
T ss_dssp --------CCSSCEEEEESCTTTCCC-----CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHH
T ss_pred --------ccCceEEEeecccccccc-----cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHH
Confidence 012348899999988642 5699999876443 23456789999999999999998532211
Q ss_pred --------hh-hhhccCCCC-C----------cccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 338 --------YH-FADLYGQED-E----------MSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 338 --------yh-~~~~~g~~~-~----------~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|+ |....|..+ + ....+|.++++.+|+++||+.++..
T Consensus 187 ~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 187 VGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp HHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEE
Confidence 11 111111000 0 0123689999999999999987654
No 10
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.74 E-value=3.6e-17 Score=155.91 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=101.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..||++|+.|+|+|+|..|+..|+-..+. .+++-. + .+......-
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~G~~V~gvD~S~~~i~~a~~~~~~-----~~~~~~-~----------~~~~~~~~~--- 128 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNL-----SYTEEP-L----------AEIAGAKVF--- 128 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHTTCEEEEECSCHHHHHHHHHHTTC-----CEEEEE-C----------TTSTTCEEE---
T ss_pred CCCeEEEeCCCCcHHHHHHHHCCCeEEEEECCHHHHHHHHHhccc-----cccccc-c----------ccccccccc---
Confidence 457999999999999999999999999999999999766521110 000000 0 000000000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~ 346 (412)
.....++.+.++|+.++.. ...++||+|+....+. ..++...|++.++++|||||+++-+.. .|.... .++
T Consensus 129 ---~~~~~~i~~~~~D~~~l~~--~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~-~~~~~~-~~g 201 (252)
T 2gb4_A 129 ---KSSSGSISLYCCSIFDLPR--ANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL-SYDPTK-HAG 201 (252)
T ss_dssp ---EETTSSEEEEESCTTTGGG--GCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE-ECCTTS-CCC
T ss_pred ---ccCCCceEEEECccccCCc--ccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE-ecCCcc-CCC
Confidence 0011348999999998753 1127899999754332 234577899999999999999852111 111111 111
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+ .+.++.+||.+++.. +|+++..+
T Consensus 202 ~---~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 202 P---PFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp S---SCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred C---CCCCCHHHHHHHhhC-CeEEEEEe
Confidence 2 355899999999987 69998854
No 11
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.74 E-value=2.3e-17 Score=154.35 Aligned_cols=107 Identities=15% Similarity=0.087 Sum_probs=85.5
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.+++.|...++ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 39 ~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~--------------------- 92 (263)
T 3pfg_A 39 DLAALVRRHSP-----KAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRN--------------------- 92 (263)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHhhCC-----CCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhC---------------------
Confidence 46666666655 4569999999999999999999999999999999997665110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-c---cCChhhHHHHHHHHHHhccCCc
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F---IDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-F---IDta~Ni~~yl~~I~~~LKPGG 328 (412)
.++.++.+|+.++.. .++||+|++.+ . +....++..+|+.++++|||||
T Consensus 93 -----------------------~~~~~~~~d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 145 (263)
T 3pfg_A 93 -----------------------PDAVLHHGDMRDFSL----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDG 145 (263)
T ss_dssp -----------------------TTSEEEECCTTTCCC----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECChHHCCc----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCc
Confidence 025788999988542 57999999875 3 4444678899999999999999
Q ss_pred EEEE
Q 015160 329 VWIN 332 (412)
Q Consensus 329 ~wIN 332 (412)
++|-
T Consensus 146 ~l~i 149 (263)
T 3pfg_A 146 VVVV 149 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9984
No 12
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.73 E-value=8.7e-17 Score=146.90 Aligned_cols=179 Identities=13% Similarity=0.071 Sum_probs=117.9
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
|..+.+.+.+.+... ..++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+...
T Consensus 20 ~~~~~~~~~~~l~~~-~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~s~~~~~~a~~~~~~~---------------- 82 (246)
T 1y8c_A 20 YKKWSDFIIEKCVEN-NLVFDDYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ---------------- 82 (246)
T ss_dssp HHHHHHHHHHHHHTT-TCCTTEEEEETCTTSTTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHHHHHHHHh-CCCCCeEEEeCCCCCHHHHHHHHCCCcEEEEECCHHHHHHHHHHHhhc----------------
Confidence 334444444444321 115679999999999999999999999999999999997766322100
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-cc---CChhhHHHHHHHHHHhccC
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FI---DTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FI---Dta~Ni~~yl~~I~~~LKP 326 (412)
..++.+..+|+.++.. .++||+|++.. .+ ...+++..+|+.++++|||
T Consensus 83 ------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~p 134 (246)
T 1y8c_A 83 ------------------------GLKPRLACQDISNLNI----NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKE 134 (246)
T ss_dssp ------------------------TCCCEEECCCGGGCCC----SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEE
T ss_pred ------------------------CCCeEEEecccccCCc----cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCC
Confidence 0026788899887532 27899999876 43 3447889999999999999
Q ss_pred CcEEEEecCcc----------------------hhhhhc-------------cCCC------CCcccCCCHHHHHHHHHh
Q 015160 327 GGVWINLGPLL----------------------YHFADL-------------YGQE------DEMSIELSLEDVKRVALH 365 (412)
Q Consensus 327 GG~wIN~GPLl----------------------yh~~~~-------------~g~~------~~~~ieLS~EEL~~ll~~ 365 (412)
||++|--.|.. |..... .++. ......++.+++++++++
T Consensus 135 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~ 214 (246)
T 1y8c_A 135 GGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGEFYKRFDEEHEERAYKEEDIEKYLKH 214 (246)
T ss_dssp EEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEEEEEECCCHHHHHHHHHH
T ss_pred CcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCCcccccEEEEEEEcCCHHHHHHHHHH
Confidence 99998421110 000000 0000 000124699999999999
Q ss_pred CCCEEEEEeec--cccCCCCcccccccccceEEEEEEEc
Q 015160 366 YGFEFEKEKTI--ETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 366 ~GFeii~e~~i--~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
+||++++.... ...+..+ -...++||||+
T Consensus 215 aGf~~~~~~~~~~~~~~~~~--------~~~~~~varK~ 245 (246)
T 1y8c_A 215 GQLNILDKVDCYSNKKVEKF--------TERITYLVKLG 245 (246)
T ss_dssp TTEEEEEEEESSSSCBCCTT--------CSEEEEEEEEC
T ss_pred CCCeEEEEEcccccCcCCCC--------ceeEEEEEEec
Confidence 99999886532 1222222 23568899996
No 13
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.73 E-value=1.3e-16 Score=143.21 Aligned_cols=138 Identities=12% Similarity=0.144 Sum_probs=102.7
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p 269 (412)
+.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-. .
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~---------------------------------~----- 83 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGHQIEGLEPATRLVELARQT---------------------------------H----- 83 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTCCEEEECCCHHHHHHHHHH---------------------------------C-----
T ss_pred CCeEEEecCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHh---------------------------------C-----
Confidence 46899999999999999999999999999999998765511 0
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 270 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 270 ~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
.++.+..+|+.++.. ..++||+|++...+... .++..+++.++++|||||+++-..+..-.... ....
T Consensus 84 ------~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~-~~~~ 153 (203)
T 3h2b_A 84 ------PSVTFHHGTITDLSD---SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP-MYHP 153 (203)
T ss_dssp ------TTSEEECCCGGGGGG---SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE-ECCS
T ss_pred ------CCCeEEeCccccccc---CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh-hhch
Confidence 125778899888642 35899999987755544 47899999999999999999852211111100 0111
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
......++.++++++++++||+++....
T Consensus 154 ~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 154 VATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp SSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 1123457999999999999999998663
No 14
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.73 E-value=4e-17 Score=150.33 Aligned_cols=139 Identities=17% Similarity=0.191 Sum_probs=105.3
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p 269 (412)
+.+|||+|||+|+++..|++.|+.|+|+|+|..|+..++-.+...
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------------- 111 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPERFVVGLDISESALAKANETYGSS----------------------------------- 111 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTEEEEEECSCHHHHHHHHHHHTTS-----------------------------------
T ss_pred CCCEEEeCCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHhhcc-----------------------------------
Confidence 359999999999999999999999999999999997766322100
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 270 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 270 ~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
....++.+..+|+.++.. .++||+|++...+...+ +...+++.++++|||||++|-... ......++.
T Consensus 112 ---~~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~---~~~~~~~~~ 181 (235)
T 3lcc_A 112 ---PKAEYFSFVKEDVFTWRP----TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY---PITDHVGGP 181 (235)
T ss_dssp ---GGGGGEEEECCCTTTCCC----SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC---CCSCCCSCS
T ss_pred ---CCCcceEEEECchhcCCC----CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe---cccccCCCC
Confidence 011347899999988642 46999999887665443 789999999999999999985321 111111112
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
.+.++.+++.+++++.||+++.....
T Consensus 182 ---~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 182 ---PYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp ---SCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred ---CccCCHHHHHHHHHHcCCeEEEEEec
Confidence 35689999999999999999986543
No 15
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.73 E-value=1.6e-16 Score=147.47 Aligned_cols=180 Identities=13% Similarity=0.174 Sum_probs=120.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
...|.+.++.. ++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-.+.
T Consensus 33 ~~~l~~~~~~~---~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--------------------- 88 (253)
T 3g5l_A 33 WHELKKMLPDF---NQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--------------------- 88 (253)
T ss_dssp HHHHHTTCCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---------------------
T ss_pred HHHHHHhhhcc---CCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---------------------
Confidence 34455666532 567999999999999999999999 99999999999976652110
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
..++.+..+|+.++.. ..++||+|++...+...+++..+|+.++++|||||++|-.
T Consensus 89 ---------------------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 89 ---------------------SPVVCYEQKAIEDIAI---EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp ---------------------CTTEEEEECCGGGCCC---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------------cCCeEEEEcchhhCCC---CCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 1237889999887632 3589999999887666678899999999999999999853
Q ss_pred --cCcc-------hhhhhc-----------cCCC---------CCcccCCCHHHHHHHHHhCCCEEEEEe--eccccCCC
Q 015160 334 --GPLL-------YHFADL-----------YGQE---------DEMSIELSLEDVKRVALHYGFEFEKEK--TIETTYTT 382 (412)
Q Consensus 334 --GPLl-------yh~~~~-----------~g~~---------~~~~ieLS~EEL~~ll~~~GFeii~e~--~i~s~Y~~ 382 (412)
.|.. |.+... .... ....+..|.++++++++++||+++... ........
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~e~~~~~~~~~ 224 (253)
T 3g5l_A 145 VEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAPELKD 224 (253)
T ss_dssp EECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEEECCCHHHHHHHHHHTTEEEEEEECCCCCGGGSS
T ss_pred eCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCccEecCHHHHHHHHHHcCCeeeeeecCCCchhhcc
Confidence 2211 111000 0000 001123399999999999999998844 22222222
Q ss_pred CcccccccccceEEE--EEEEcC
Q 015160 383 NPRSMMQNRYFTAFW--TMRKKS 403 (412)
Q Consensus 383 d~~sm~~~~Y~~~f~--VarK~~ 403 (412)
...+....-.+.|+ .|+|..
T Consensus 225 -~~~~~~~~~~P~fl~~~~~~~~ 246 (253)
T 3g5l_A 225 -LPEMQDEYRRPMMLLISATKQE 246 (253)
T ss_dssp -CGGGGGGGTSCCEEEEEEEECC
T ss_pred -ChhHHHhhcCceEEEEEEeccc
Confidence 33344444445554 455543
No 16
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.72 E-value=2.5e-16 Score=144.18 Aligned_cols=176 Identities=16% Similarity=0.109 Sum_probs=120.8
Q ss_pred hchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 169 QCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 169 ~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
..|..+++.+.+.++ ++.+|||+|||+|+++..|+++ ..|+|+|+|..|+..++-.+...
T Consensus 18 ~~~~~~~~~~~~~~~-----~~~~vLdiG~G~G~~~~~l~~~-~~v~~vD~s~~~~~~a~~~~~~~-------------- 77 (243)
T 3d2l_A 18 VPYPEWVAWVLEQVE-----PGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEMLEIAQEKAMET-------------- 77 (243)
T ss_dssp CCHHHHHHHHHHHSC-----TTCEEEEESCTTCHHHHHHTTT-SEEEEEESCHHHHHHHHHHHHHT--------------
T ss_pred ccHHHHHHHHHHHcC-----CCCeEEEecCCCCHHHHHHhhC-CeEEEEECCHHHHHHHHHhhhhc--------------
Confidence 346678888888875 3469999999999999999999 89999999999997766322100
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec----ccCChhhHHHHHHHHHHhc
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRIL 324 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F----FIDta~Ni~~yl~~I~~~L 324 (412)
..++.+..+|+.++.. .++||+|++.+ ++....++..+++.++++|
T Consensus 78 --------------------------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L 127 (243)
T 3d2l_A 78 --------------------------NRHVDFWVQDMRELEL----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLL 127 (243)
T ss_dssp --------------------------TCCCEEEECCGGGCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHE
T ss_pred --------------------------CCceEEEEcChhhcCC----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhc
Confidence 0126788899887532 37899999753 4545577889999999999
Q ss_pred cCCcEEEEecCcch--------------------hhhhccCC---------------CCC---------cccCCCHHHHH
Q 015160 325 KDGGVWINLGPLLY--------------------HFADLYGQ---------------EDE---------MSIELSLEDVK 360 (412)
Q Consensus 325 KPGG~wIN~GPLly--------------------h~~~~~g~---------------~~~---------~~ieLS~EEL~ 360 (412)
||||++|-.-|-.. .+....+. ... ....++.+|++
T Consensus 128 ~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 207 (243)
T 3d2l_A 128 TDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYI 207 (243)
T ss_dssp EEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHH
T ss_pred CCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHH
Confidence 99999984111000 00000000 000 01247999999
Q ss_pred HHHHhCCCEEEEEeec--cccCCCCcccccccccceEEEEEEEc
Q 015160 361 RVALHYGFEFEKEKTI--ETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 361 ~ll~~~GFeii~e~~i--~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
++++++||++++.... ..++..+ -...++||||+
T Consensus 208 ~~l~~aGf~~~~~~~~~~~~~~~~~--------~~~~~~va~K~ 243 (243)
T 3d2l_A 208 TWLREAGFRVCAVTGDFKSDAPTET--------AERIFFVAEKI 243 (243)
T ss_dssp HHHHHTTEEEEEEEETTSSSCCCTT--------CSEEEEEEEEC
T ss_pred HHHHHCCCeEEEEecCcccCCCCCC--------ceEEEEEEEeC
Confidence 9999999999886421 2223222 24568899995
No 17
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.72 E-value=7.7e-17 Score=142.99 Aligned_cols=164 Identities=17% Similarity=0.098 Sum_probs=110.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+... .
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------- 78 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAANGYDVDAWDKNAMSIANVERIKSIE--------------------------N------- 78 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCeEEEEcCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHhC--------------------------C-------
Confidence 4569999999999999999999999999999999997766322110 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~ 346 (412)
..++.+..+|+.++. . .++||+|++...+.. .+++..+++.++++|||||+++-+.+..-. ....
T Consensus 79 ------~~~~~~~~~d~~~~~---~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~---~~~~ 145 (199)
T 2xvm_A 79 ------LDNLHTRVVDLNNLT---F-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTA---DYPC 145 (199)
T ss_dssp ------CTTEEEEECCGGGCC---C-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCS---SSCC
T ss_pred ------CCCcEEEEcchhhCC---C-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccC---CcCC
Confidence 012678889988753 2 578999998764432 347889999999999999997743222110 0011
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEEEeec--cccCCCCcccccccccceEEEEEEEc
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~e~~i--~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
.+.....++.+|++++++. |++++.... ...+.... -....+....++|||+
T Consensus 146 ~~~~~~~~~~~~l~~~~~~--f~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~arK~ 199 (199)
T 2xvm_A 146 TVGFPFAFKEGELRRYYEG--WERVKYNEDVGELHRTDAN--GNRIKLRFATMLARKK 199 (199)
T ss_dssp CSCCSCCBCTTHHHHHTTT--SEEEEEECCEEEEEEECTT--SCEEEEEEEEEEEECC
T ss_pred CCCCCCccCHHHHHHHhcC--CeEEEecccceEEEeecCC--CCeeeEEEEEEEEecC
Confidence 1112456899999999976 999885421 11121111 1112334556789885
No 18
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.71 E-value=6.9e-17 Score=153.92 Aligned_cols=210 Identities=16% Similarity=0.113 Sum_probs=121.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHH-cCCeEEEEeCCHHHHHHHHhhhhccccccccc-ccccccccCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWN-IYPWIHSNCN 251 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~-I~P~i~~~sn 251 (412)
.+..|.+.++.. ..++.+|||+|||+|+++..+++ .|..|+|+|+|..|+..++-.++.......+. ..+++.....
T Consensus 57 ~~~~l~~~l~~~-~~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~ 135 (289)
T 2g72_A 57 KLRCLAQTFATG-EVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEG 135 (289)
T ss_dssp HHHHHHHHHHTS-CSCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC-CCCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcC
Confidence 344455544221 12567999999999997666655 37899999999999977663322100000000 0000000000
Q ss_pred ---C-CCcccCccccccCCCCCCCCCCCCceeEEeccccc-ccCC--CCCCCCccEEEEecccCC----hhhHHHHHHHH
Q 015160 252 ---S-LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE-VYSD--PSQVGAWDAVVTCFFIDT----AHNIVEYIEII 320 (412)
Q Consensus 252 ---~-~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~e-ly~~--~~~~~~fD~VvT~FFIDt----a~Ni~~yl~~I 320 (412)
. .....+++ .....++.+|+.+ +... ....++||+|++.+.+.. .+++..+|+.+
T Consensus 136 ~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~ 201 (289)
T 2g72_A 136 KGECWQDKERQLR--------------ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHI 201 (289)
T ss_dssp SCCCHHHHHHHHH--------------HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHH
T ss_pred cccchhhhHHHHH--------------hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHH
Confidence 0 00000000 0014567778776 2210 012467999999876554 56789999999
Q ss_pred HHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeec--cccCCCCcccccccccceEEEE
Q 015160 321 SRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI--ETTYTTNPRSMMQNRYFTAFWT 398 (412)
Q Consensus 321 ~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i--~s~Y~~d~~sm~~~~Y~~~f~V 398 (412)
+++|||||++|-.+.+.-.+... +........++.++++++++++||+++..... ...|... ...|...|||
T Consensus 202 ~r~LkpGG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 275 (289)
T 2g72_A 202 TTLLRPGGHLLLIGALEESWYLA-GEARLTVVPVSEEEVREALVRSGYKVRDLRTYIMPAHLQTG-----VDDVKGVFFA 275 (289)
T ss_dssp HTTEEEEEEEEEEEEESCCEEEE-TTEEEECCCCCHHHHHHHHHHTTEEEEEEEEEECCGGGCCT-----TBCCCEEEEE
T ss_pred HHhcCCCCEEEEEEecCcceEEc-CCeeeeeccCCHHHHHHHHHHcCCeEEEeeEeecccccccc-----ccCcceEEEE
Confidence 99999999999654321111110 11110123579999999999999999885532 2445432 2567788998
Q ss_pred EEEcCc
Q 015160 399 MRKKSV 404 (412)
Q Consensus 399 arK~~~ 404 (412)
++|+..
T Consensus 276 ~~~~~~ 281 (289)
T 2g72_A 276 WAQKVG 281 (289)
T ss_dssp EEEECC
T ss_pred EEeccc
Confidence 888754
No 19
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.71 E-value=4.4e-16 Score=139.62 Aligned_cols=138 Identities=16% Similarity=0.172 Sum_probs=101.7
Q ss_pred eEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCC
Q 015160 192 ACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPAS 271 (412)
Q Consensus 192 rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~ 271 (412)
+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------------- 74 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGYEVTAVDQSSVGLAKAKQLAQEK------------------------------------- 74 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHH-------------------------------------
T ss_pred CEEEECCCCCHhHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------------
Confidence 9999999999999999999999999999999997766332100
Q ss_pred CCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcc
Q 015160 272 AGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMS 351 (412)
Q Consensus 272 ~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ 351 (412)
..++.+..+|+.++.. ..++||+|++.+......+...+++.+.++|||||++|-..+.........+.+....
T Consensus 75 ---~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~ 148 (202)
T 2kw5_A 75 ---GVKITTVQSNLADFDI---VADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQYNTGGPKDLD 148 (202)
T ss_dssp ---TCCEEEECCBTTTBSC---CTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGGTSCCSSSGG
T ss_pred ---CCceEEEEcChhhcCC---CcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccCCCCCCCcce
Confidence 0126788889887632 3578999998765445667889999999999999999854332111110012122224
Q ss_pred cCCCHHHHHHHHHhCCCEEEEEe
Q 015160 352 IELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 352 ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
..++.++++++++ ||+++...
T Consensus 149 ~~~~~~~l~~~l~--Gf~v~~~~ 169 (202)
T 2kw5_A 149 LLPKLETLQSELP--SLNWLIAN 169 (202)
T ss_dssp GCCCHHHHHHHCS--SSCEEEEE
T ss_pred eecCHHHHHHHhc--CceEEEEE
Confidence 5789999999997 99999854
No 20
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.71 E-value=2.9e-16 Score=142.18 Aligned_cols=140 Identities=11% Similarity=-0.035 Sum_probs=106.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..|++++ ..|+|+|+|..|+..++..+... .
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------------------~-- 86 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL----------------------------G-- 86 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH----------------------------T--
T ss_pred CCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc----------------------------C--
Confidence 56799999999999999999997 89999999999998776332110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.++.. ..++||+|++...+....+...+++.++++|||||+++-..+..... ..
T Consensus 87 ---------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~--~~- 151 (219)
T 3dh0_A 87 ---------LKNVEVLKSEENKIPL---PDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEER--DK- 151 (219)
T ss_dssp ---------CTTEEEEECBTTBCSS---CSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCC--SS-
T ss_pred ---------CCcEEEEecccccCCC---CCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccc--cc-
Confidence 0137889999887532 35789999998877666778899999999999999998643221111 00
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+.....++.++++++++++||++++..
T Consensus 152 -~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 152 -GPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp -SCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred -CCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 1112345799999999999999998864
No 21
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.71 E-value=6.4e-16 Score=140.05 Aligned_cols=151 Identities=21% Similarity=0.228 Sum_probs=107.5
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.|..+++.+... ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+.
T Consensus 33 ~~~~~l~~~~~~-------~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------- 88 (220)
T 3hnr_A 33 HYEDILEDVVNK-------SFGNVLEFGVGTGNLTNKLLLAGRTVYGIEPSREMRMIAKEKLP----------------- 88 (220)
T ss_dssp THHHHHHHHHHT-------CCSEEEEECCTTSHHHHHHHHTTCEEEEECSCHHHHHHHHHHSC-----------------
T ss_pred HHHHHHHHhhcc-------CCCeEEEeCCCCCHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCC-----------------
Confidence 345566666542 45699999999999999999999999999999999976552110
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHH--HHHHHHHhccCC
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE--YIEIISRILKDG 327 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~--yl~~I~~~LKPG 327 (412)
.++.+..+|+.++.. . ++||+|++...+....+... +|+.++++||||
T Consensus 89 --------------------------~~~~~~~~d~~~~~~---~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 138 (220)
T 3hnr_A 89 --------------------------KEFSITEGDFLSFEV---P-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKG 138 (220)
T ss_dssp --------------------------TTCCEESCCSSSCCC---C-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTT
T ss_pred --------------------------CceEEEeCChhhcCC---C-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCC
Confidence 126788899888643 2 89999999876665555444 999999999999
Q ss_pred cEEEEecCcchhhhh---------ccCC-----CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 328 GVWINLGPLLYHFAD---------LYGQ-----EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 328 G~wIN~GPLlyh~~~---------~~g~-----~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|+++-..|..-.... ..+- ........+.++++++++++||+++...
T Consensus 139 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 199 (220)
T 3hnr_A 139 GKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTR 199 (220)
T ss_dssp CEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEee
Confidence 999864332211000 0000 0001234589999999999999988766
No 22
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.70 E-value=7.7e-17 Score=151.97 Aligned_cols=148 Identities=15% Similarity=0.090 Sum_probs=105.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..+++.|. .|+|+|+|..|+..++..+...
T Consensus 64 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 110 (298)
T 1ri5_A 64 RGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNM--------------------------------- 110 (298)
T ss_dssp TTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTS---------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 567999999999999999999998 8999999999997766322100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc----CChhhHHHHHHHHHHhccCCcEEEEecCcc------
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRILKDGGVWINLGPLL------ 337 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFI----Dta~Ni~~yl~~I~~~LKPGG~wIN~GPLl------ 337 (412)
....++.+..+|+.++... ..++||+|++.+.+ ....++..+|+.++++|||||++|-..|..
T Consensus 111 -----~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 183 (298)
T 1ri5_A 111 -----KRRFKVFFRAQDSYGRHMD--LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILER 183 (298)
T ss_dssp -----CCSSEEEEEESCTTTSCCC--CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH
T ss_pred -----CCCccEEEEECCccccccC--CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 0012478899998875321 25789999987655 456788999999999999999998533321
Q ss_pred ----------hhhhhc--------cC----------CCCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 338 ----------YHFADL--------YG----------QEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 338 ----------yh~~~~--------~g----------~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
|...-. .| ........++.++++++++++||+++.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~~ 250 (298)
T 1ri5_A 184 YKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGF 250 (298)
T ss_dssp HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEEH
T ss_pred HccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecCH
Confidence 110000 00 0000012468999999999999999986543
No 23
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=3.9e-16 Score=144.55 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+.. .
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~---~------------------------------- 86 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKE---R------------------------------- 86 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---T-------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHh---c-------------------------------
Confidence 567999999999999999999999999999999999776632210 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.++.. .++||+|++.+ ..-..+++..+++.++++|||||++|-
T Consensus 87 ------~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 87 ------NLKIEFLQGDVLEIAF----KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp ------TCCCEEEESCGGGCCC----CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCceEEEECChhhccc----CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 0126789999988642 36899998653 222445788999999999999999983
No 24
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.69 E-value=4e-16 Score=140.31 Aligned_cols=139 Identities=14% Similarity=0.097 Sum_probs=100.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++. . .
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~-------~-----------------------~------- 88 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGR-------H-----------------------G------- 88 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHSSEEEEEESCHHHHHHHGG-------G-----------------------C-------
T ss_pred CCCeEEEECCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHh-------c-----------------------C-------
Confidence 45699999999999999999999999999999999876551 0 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcc---h--h-h
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLL---Y--H-F 340 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKPGG~wIN~GPLl---y--h-~ 340 (412)
..++.+..+|+.++. ..++||+|++...+...++ +..+|+.++++|||||+++-..+.. + . +
T Consensus 89 ------~~~~~~~~~d~~~~~----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 158 (218)
T 3ou2_A 89 ------LDNVEFRQQDLFDWT----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQD 158 (218)
T ss_dssp ------CTTEEEEECCTTSCC----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------
T ss_pred ------CCCeEEEecccccCC----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhh
Confidence 013788999998873 2589999998876654444 5899999999999999998532210 0 0 0
Q ss_pred hhc----cC--CCCCcc-----cCCCHHHHHHHHHhCCCEEEEEe
Q 015160 341 ADL----YG--QEDEMS-----IELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 341 ~~~----~g--~~~~~~-----ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
... .. ...... -.++.+++.++++++||+++...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~ 203 (218)
T 3ou2_A 159 DSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDE 203 (218)
T ss_dssp -----CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeee
Confidence 000 00 000011 13699999999999999977655
No 25
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.69 E-value=4.2e-16 Score=144.15 Aligned_cols=150 Identities=17% Similarity=0.173 Sum_probs=106.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+.+.+...++.. .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-
T Consensus 28 ~~~~~~~~l~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~------------------------ 81 (240)
T 3dli_A 28 VKARLRRYIPYF--KGCRRVLDIGCGRGEFLELCKEEGIESIGVDINEDMIKFCEG------------------------ 81 (240)
T ss_dssp HHHHHGGGGGGT--TTCSCEEEETCTTTHHHHHHHHHTCCEEEECSCHHHHHHHHT------------------------
T ss_pred HHHHHHHHHhhh--cCCCeEEEEeCCCCHHHHHHHhCCCcEEEEECCHHHHHHHHh------------------------
Confidence 555555544422 155799999999999999999999999999999999865440
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEE
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKPGG~wI 331 (412)
++.+..+|+.++.. +...++||+|++...+.... ++..+|+.++++|||||++|
T Consensus 82 -----------------------~~~~~~~d~~~~~~-~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~ 137 (240)
T 3dli_A 82 -----------------------KFNVVKSDAIEYLK-SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIV 137 (240)
T ss_dssp -----------------------TSEEECSCHHHHHH-TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEE
T ss_pred -----------------------hcceeeccHHHHhh-hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEE
Confidence 02456677766421 12358999999887655443 67999999999999999998
Q ss_pred EecCcchh---hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NLGPLLYH---FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~GPLlyh---~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-..|.... +...+ ..+.....++.++++.+++++||+++...
T Consensus 138 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 138 IESPNPTSLYSLINFY-IDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp EEEECTTSHHHHHHHT-TSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEeCCcchhHHHHHHh-cCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 53332111 11111 11212345799999999999999998855
No 26
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.68 E-value=4.5e-16 Score=142.54 Aligned_cols=150 Identities=13% Similarity=0.202 Sum_probs=106.0
Q ss_pred HHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCc
Q 015160 177 ELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSD 255 (412)
Q Consensus 177 ~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~ 255 (412)
.|.+.++.. ++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++-...
T Consensus 34 ~l~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~----------------------- 87 (243)
T 3bkw_A 34 ALRAMLPEV---GGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP----------------------- 87 (243)
T ss_dssp HHHHHSCCC---TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC-----------------------
T ss_pred HHHHhcccc---CCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc-----------------------
Confidence 344455432 567999999999999999999999 99999999999976651110
Q ss_pred ccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec-
Q 015160 256 SDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG- 334 (412)
Q Consensus 256 ~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~G- 334 (412)
..++.+..+|+.++.. ..++||+|++...+...++...+|+.++++|||||++|-..
T Consensus 88 -------------------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 88 -------------------DTGITYERADLDKLHL---PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp -------------------SSSEEEEECCGGGCCC---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------------cCCceEEEcChhhccC---CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeC
Confidence 0136788899887532 35789999988766666678899999999999999998422
Q ss_pred -Ccc-------hhhhhc------cC-C-C-----------CCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 335 -PLL-------YHFADL------YG-Q-E-----------DEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 335 -PLl-------yh~~~~------~g-~-~-----------~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|.. |.+... .. . . +......+.+++.++++++||++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 212 (243)
T 3bkw_A 146 HPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVE 212 (243)
T ss_dssp CHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEE
T ss_pred CcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeec
Confidence 110 110000 00 0 0 000122589999999999999998854
No 27
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.67 E-value=1.5e-15 Score=138.67 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=84.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.+.+.|.++.+ ++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-.+
T Consensus 29 ~~~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~s~~~~~~a~~~~--------------------- 82 (239)
T 3bxo_A 29 DIADLVRSRTP-----EASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARKRL--------------------- 82 (239)
T ss_dssp HHHHHHHHHCT-----TCCEEEEETCTTSHHHHHHHHHHSEEEEEESCHHHHHHHHHHC---------------------
T ss_pred HHHHHHHHhcC-----CCCeEEEecccCCHHHHHHHHhCCcEEEEeCCHHHHHHHHHhC---------------------
Confidence 35566666553 4579999999999999999999999999999999997655110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec----ccCChhhHHHHHHHHHHhccCCc
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF----FIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F----FIDta~Ni~~yl~~I~~~LKPGG 328 (412)
.++.+..+|+.++.. .++||+|++.+ ++....++..+|+.++++|||||
T Consensus 83 -----------------------~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 135 (239)
T 3bxo_A 83 -----------------------PDATLHQGDMRDFRL----GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGG 135 (239)
T ss_dssp -----------------------TTCEEEECCTTTCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEE
T ss_pred -----------------------CCCEEEECCHHHccc----CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 025678889887532 47899999543 35555778999999999999999
Q ss_pred EEEE
Q 015160 329 VWIN 332 (412)
Q Consensus 329 ~wIN 332 (412)
++|-
T Consensus 136 ~l~~ 139 (239)
T 3bxo_A 136 VVVV 139 (239)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 28
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=2.3e-15 Score=136.47 Aligned_cols=149 Identities=13% Similarity=0.159 Sum_probs=104.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+... .+ ++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~~--~~-- 79 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSP--------------------------GL--NQ-- 79 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTCC--------------------------SC--CS--
T ss_pred CCCeEEEECCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHhc--------------------------CC--cc--
Confidence 4579999999999999999999999999999999998776332110 00 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh---hhHHHHHHHHHHhccCCcEEEEecCcc-hh---hh
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA---HNIVEYIEIISRILKDGGVWINLGPLL-YH---FA 341 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta---~Ni~~yl~~I~~~LKPGG~wIN~GPLl-yh---~~ 341 (412)
....++.+..+|+.++.. ..++||+|++...+... .....+++.++++|||||++|-..+.. +. +.
T Consensus 80 ----~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 152 (235)
T 3sm3_A 80 ----KTGGKAEFKVENASSLSF---HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYR 152 (235)
T ss_dssp ----SSSCEEEEEECCTTSCCS---CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHH
T ss_pred ----ccCcceEEEEecccccCC---CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHH
Confidence 012347899999887642 36899999988655433 334589999999999999998532210 00 00
Q ss_pred --------h--ccC----------CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 342 --------D--LYG----------QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 342 --------~--~~g----------~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
. ..+ ..+.....++.++++++++++||+++...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 153 KRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp HHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred HHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 0 000 00001235799999999999999999855
No 29
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.67 E-value=4.6e-15 Score=135.90 Aligned_cols=157 Identities=15% Similarity=0.143 Sum_probs=108.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
|..+.+.+.+.++.. .++.+|||+|||+|+++..|+++ |..|+|+|+|..|+..++..+.
T Consensus 28 ~~~~~~~~~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~---------------- 89 (234)
T 3dtn_A 28 FDDFYGVSVSIASVD--TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFR---------------- 89 (234)
T ss_dssp HHHHHHHHHHTCCCS--CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTC----------------
T ss_pred HHHHHHHHHHHhhcC--CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhc----------------
Confidence 344556666666532 25689999999999999999999 8899999999999976652110
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccC
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKD 326 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKP 326 (412)
...++.++.+|+.++.. .++||+|++...+.... ...++++.++++|||
T Consensus 90 -------------------------~~~~~~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 140 (234)
T 3dtn_A 90 -------------------------GNLKVKYIEADYSKYDF----EEKYDMVVSALSIHHLEDEDKKELYKRSYSILKE 140 (234)
T ss_dssp -------------------------SCTTEEEEESCTTTCCC----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred -------------------------cCCCEEEEeCchhccCC----CCCceEEEEeCccccCCHHHHHHHHHHHHHhcCC
Confidence 00137889999988643 27999999886554333 344699999999999
Q ss_pred CcEEEEecCcc-------------hh-hhhccCC----------CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 327 GGVWINLGPLL-------------YH-FADLYGQ----------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 327 GG~wIN~GPLl-------------yh-~~~~~g~----------~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
||++|-..+.. |. +....+. .......++.++++++++++||+.++..
T Consensus 141 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~ 212 (234)
T 3dtn_A 141 SGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCI 212 (234)
T ss_dssp EEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeee
Confidence 99998532211 00 0000010 0011234689999999999999998754
No 30
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.67 E-value=4.4e-16 Score=139.52 Aligned_cols=159 Identities=18% Similarity=0.156 Sum_probs=110.8
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
|..+.+.+.+.++.. ++ +|||+|||+|+++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 29 ~~~~~~~~~~~~~~~---~~-~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------------- 89 (219)
T 3dlc_A 29 YPIIAENIINRFGIT---AG-TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADA--------------- 89 (219)
T ss_dssp HHHHHHHHHHHHCCC---EE-EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred cHHHHHHHHHhcCCC---CC-EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhc---------------
Confidence 445666666665522 33 9999999999999999998 789999999999998776332110
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~ 329 (412)
....++.+..+|+.++.. ..++||+|++...+...++...+++.++++|||||+
T Consensus 90 -----------------------~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 143 (219)
T 3dlc_A 90 -----------------------NLNDRIQIVQGDVHNIPI---EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGK 143 (219)
T ss_dssp -----------------------TCTTTEEEEECBTTBCSS---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred -----------------------cccCceEEEEcCHHHCCC---CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCE
Confidence 011247889999988542 357999999987666567788999999999999999
Q ss_pred EEEecCcchh---------hhhccCCC-C---CcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 330 WINLGPLLYH---------FADLYGQE-D---EMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 330 wIN~GPLlyh---------~~~~~g~~-~---~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
++-..+..-. +....... . ...-.++.++++++++++||++++..
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 201 (219)
T 3dlc_A 144 TYIGGGFGNKELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEII 201 (219)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEE
T ss_pred EEEEeccCcHHHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEE
Confidence 9853322100 00000000 0 00112478999999999999987644
No 31
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=9.4e-16 Score=142.03 Aligned_cols=158 Identities=16% Similarity=0.145 Sum_probs=111.9
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
.+...++.|.+.++.. ++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.... .
T Consensus 20 ~~~~~~~~l~~~~~~~---~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~---~----------- 82 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMK---PGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEE---L----------- 82 (256)
T ss_dssp CCHHHHHHHHHHTCCC---TTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHH---T-----------
T ss_pred CCHHHHHHHHHhcCCC---CCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHh---c-----------
Confidence 3445666666666422 5679999999999999999987 88999999999999776632210 0
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
....++.+..+|+.++.. .++||+|++...+....+...+|+.++++|||||
T Consensus 83 ------------------------~~~~~v~~~~~d~~~~~~----~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG 134 (256)
T 1nkv_A 83 ------------------------GVSERVHFIHNDAAGYVA----NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGG 134 (256)
T ss_dssp ------------------------TCTTTEEEEESCCTTCCC----SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEE
T ss_pred ------------------------CCCcceEEEECChHhCCc----CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCe
Confidence 011247889999987532 5789999987655555567899999999999999
Q ss_pred EEEEecCcchh------hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 329 VWINLGPLLYH------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 329 ~wIN~GPLlyh------~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
+++-..|.... +..... .......++.+++.++++++||+++..
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~ 184 (256)
T 1nkv_A 135 IMLIGEPYWRQLPATEEIAQACG-VSSTSDFLTLPGLVGAFDDLGYDVVEM 184 (256)
T ss_dssp EEEEEEEEETTCCSSHHHHHTTT-CSCGGGSCCHHHHHHHHHTTTBCCCEE
T ss_pred EEEEecCcccCCCChHHHHHHHh-cccccccCCHHHHHHHHHHCCCeeEEE
Confidence 99854332110 000000 011123579999999999999998764
No 32
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.65 E-value=1.8e-15 Score=139.64 Aligned_cols=142 Identities=15% Similarity=0.048 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..|+++|+. |+|+|+|..|+..++-.+..
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 138 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG---------------------------------- 138 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT----------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc----------------------------------
Confidence 5679999999999999999999864 99999999999766522100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.++.. ..++||+|++...+... .++..+|+.++++|||||++|-..+..-.......
T Consensus 139 -------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~ 208 (254)
T 1xtp_A 139 -------MPVGKFILASMETATL---PPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVD 208 (254)
T ss_dssp -------SSEEEEEESCGGGCCC---CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEEEE
T ss_pred -------CCceEEEEccHHHCCC---CCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccceec
Confidence 0136788999887532 35799999988765544 56889999999999999999854332110000000
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
.....+..+.++++++++++||++++...
T Consensus 209 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 209 -KEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp -TTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 11124567999999999999999988653
No 33
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.65 E-value=1.1e-15 Score=141.48 Aligned_cols=142 Identities=13% Similarity=0.199 Sum_probs=102.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..|+++|. .|+|+|+|..|+..++..+... +
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------ 126 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEE--------------------------G------ 126 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGG--------------------------G------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhc--------------------------C------
Confidence 467999999999999999999976 8999999999997766322100 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.++.. ..++||+|++...+....+ +..+|+.++++|||||++|-..+.... ...+.
T Consensus 127 -------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-~~~~~ 195 (241)
T 2ex4_A 127 -------KRVRNYFCCGLQDFTP---EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-GVILD 195 (241)
T ss_dssp -------GGEEEEEECCGGGCCC---CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-SEEEE
T ss_pred -------CceEEEEEcChhhcCC---CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-cceec
Confidence 1136788899877543 3568999998875554433 668999999999999999864333221 00000
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.....+..+.++++++++++||++++..
T Consensus 196 -~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 223 (241)
T 2ex4_A 196 -DVDSSVCRDLDVVRRIICSAGLSLLAEE 223 (241)
T ss_dssp -TTTTEEEEBHHHHHHHHHHTTCCEEEEE
T ss_pred -ccCCcccCCHHHHHHHHHHcCCeEEEee
Confidence 0011345699999999999999998865
No 34
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=6.4e-15 Score=129.28 Aligned_cols=145 Identities=17% Similarity=0.098 Sum_probs=106.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~------------------------------------- 88 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGHDVLGTDLDPILIDYAKQDF------------------------------------- 88 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHCCCcEEEEcCCHHHHHHHHHhC-------------------------------------
Confidence 4569999999999999999999999999999999987655111
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~-FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
.++.+..+|+.++.. ..++||+|++. .++. ..++...+++.++++|||||++|-..|.
T Consensus 89 -------~~~~~~~~d~~~~~~---~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~--------- 149 (195)
T 3cgg_A 89 -------PEARWVVGDLSVDQI---SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA--------- 149 (195)
T ss_dssp -------TTSEEEECCTTTSCC---CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET---------
T ss_pred -------CCCcEEEcccccCCC---CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC---------
Confidence 014677888877532 25789999986 2322 3456789999999999999999842110
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEee--ccccCCCCcccccccccceEEEEEEEc
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT--IETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~~--i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
.-.++.+++..++++.||++++... ...+|..+ ....++|+||+
T Consensus 150 -----~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~--------~~~~~~v~~k~ 195 (195)
T 3cgg_A 150 -----GRGWVFGDFLEVAERVGLELENAFESWDLKPFVQG--------SEFLVAVFTKK 195 (195)
T ss_dssp -----TSSCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTT--------CSEEEEEEEEC
T ss_pred -----CCCcCHHHHHHHHHHcCCEEeeeecccccCcCCCC--------CcEEEEEEecC
Confidence 1137899999999999999988642 22233222 24556778875
No 35
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.64 E-value=2.8e-15 Score=138.72 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=104.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-....
T Consensus 55 ~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------------- 100 (266)
T 3ujc_A 55 ENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG---------------------------------- 100 (266)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc----------------------------------
Confidence 6679999999999999999998 99999999999999766521100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchh------
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH------ 339 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh------ 339 (412)
..++.+..+|+.++. ...++||+|++...+... .+...+|+.++++|||||+++-..+....
T Consensus 101 -------~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~ 170 (266)
T 3ujc_A 101 -------NNKIIFEANDILTKE---FPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDD 170 (266)
T ss_dssp -------CTTEEEEECCTTTCC---CCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCH
T ss_pred -------CCCeEEEECccccCC---CCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchH
Confidence 023788999988763 236899999998766655 78999999999999999999854321111
Q ss_pred -hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 340 -FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 340 -~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+.... .+.....++.+++.++++++||+++...
T Consensus 171 ~~~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 171 EFKEYV--KQRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp HHHHHH--HHHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHH--hcCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 10000 0001224799999999999999998855
No 36
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.64 E-value=4.7e-15 Score=135.51 Aligned_cols=174 Identities=19% Similarity=0.104 Sum_probs=117.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.|...++.|....| +.+|||+|||+|+++..|+++ +|+|+|..|+..++-.
T Consensus 34 ~~~~~~~~l~~~~~------~~~vLDiG~G~G~~~~~l~~~----~~vD~s~~~~~~a~~~------------------- 84 (219)
T 1vlm_A 34 AYLSELQAVKCLLP------EGRGVEIGVGTGRFAVPLKIK----IGVEPSERMAEIARKR------------------- 84 (219)
T ss_dssp HHHHHHHHHHHHCC------SSCEEEETCTTSTTHHHHTCC----EEEESCHHHHHHHHHT-------------------
T ss_pred hHHHHHHHHHHhCC------CCcEEEeCCCCCHHHHHHHHH----hccCCCHHHHHHHHhc-------------------
Confidence 45567777777765 458999999999999999987 9999999998655410
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~ 329 (412)
++.+..+|+.++. ...++||+|++...+...++...+|+.++++|||||+
T Consensus 85 ---------------------------~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 134 (219)
T 1vlm_A 85 ---------------------------GVFVLKGTAENLP---LKDESFDFALMVTTICFVDDPERALKEAYRILKKGGY 134 (219)
T ss_dssp ---------------------------TCEEEECBTTBCC---SCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEE
T ss_pred ---------------------------CCEEEEcccccCC---CCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcE
Confidence 1456778877653 2357899999887666666788999999999999999
Q ss_pred EEEecCcchh-----hhhc-cCCC-CCcccCCCHHHHHHHHHhCCCEEEEEe--eccccCCCCccccccccc---ceEEE
Q 015160 330 WINLGPLLYH-----FADL-YGQE-DEMSIELSLEDVKRVALHYGFEFEKEK--TIETTYTTNPRSMMQNRY---FTAFW 397 (412)
Q Consensus 330 wIN~GPLlyh-----~~~~-~g~~-~~~~ieLS~EEL~~ll~~~GFeii~e~--~i~s~Y~~d~~sm~~~~Y---~~~f~ 397 (412)
+|-..|.... +... .+.. ......++.+++.++++++||++++.. ....+|..+........+ ...++
T Consensus 135 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i 214 (219)
T 1vlm_A 135 LIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQTLFKHPSELSEIEPVKEGYGEGAFVVI 214 (219)
T ss_dssp EEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEEECCSCGGGCSSCCCCEESSSSSSEEEE
T ss_pred EEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEecccCCCCCccccchhhhcCCCCCeEEEE
Confidence 9853322111 1100 0100 011234799999999999999998844 223344333322221222 35566
Q ss_pred EEEEc
Q 015160 398 TMRKK 402 (412)
Q Consensus 398 VarK~ 402 (412)
+|+|+
T Consensus 215 ~a~K~ 219 (219)
T 1vlm_A 215 RGTKK 219 (219)
T ss_dssp EEECC
T ss_pred EecCC
Confidence 88874
No 37
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.64 E-value=1.5e-15 Score=141.76 Aligned_cols=142 Identities=14% Similarity=0.110 Sum_probs=103.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+.. . +
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~---~-----------------------~------- 83 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVARAFIEG---N-----------------------G------- 83 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHH---T-----------------------T-------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHh---c-----------------------C-------
Confidence 567999999999999999999999999999999999776632210 0 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe---cCcc---hhhhh
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL---GPLL---YHFAD 342 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~---GPLl---yh~~~ 342 (412)
..++.+..+|+.++. ...++||+|++.+.+...++....|++++++|||||+++-. .|-. ..+..
T Consensus 84 ------~~~v~~~~~d~~~l~---~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~ 154 (260)
T 1vl5_A 84 ------HQQVEYVQGDAEQMP---FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYN 154 (260)
T ss_dssp ------CCSEEEEECCC-CCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHH
T ss_pred ------CCceEEEEecHHhCC---CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHH
Confidence 013778999988753 23589999999876666677889999999999999999853 2211 00000
Q ss_pred ---ccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 343 ---LYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 343 ---~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
... .+.....++.+++.++++++||+++..
T Consensus 155 ~~~~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~ 187 (260)
T 1vl5_A 155 YVEKER-DYSHHRAWKKSDWLKMLEEAGFELEEL 187 (260)
T ss_dssp HHHHHH-CTTCCCCCBHHHHHHHHHHHTCEEEEE
T ss_pred HHHHhc-CccccCCCCHHHHHHHHHHCCCeEEEE
Confidence 000 111123579999999999999998773
No 38
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.64 E-value=2.1e-15 Score=142.97 Aligned_cols=174 Identities=16% Similarity=0.130 Sum_probs=114.7
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+++.+... ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++..+...
T Consensus 110 ~~~~~~~~~~-------~~~~vLD~GcG~G~~~~~l~~~g~~v~~vD~s~~~~~~a~~~~~~~----------------- 165 (286)
T 3m70_A 110 GDVVDAAKII-------SPCKVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKE----------------- 165 (286)
T ss_dssp HHHHHHHHHS-------CSCEEEEESCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHhhcc-------CCCcEEEECCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 3456655542 4569999999999999999999999999999999998776332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~ 329 (412)
+ .++.+..+|+.++.. .++||+|++...+. ..+++..+++.++++|||||+
T Consensus 166 ---------~--------------~~~~~~~~d~~~~~~----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 218 (286)
T 3m70_A 166 ---------N--------------LNISTALYDINAANI----QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGY 218 (286)
T ss_dssp ---------T--------------CCEEEEECCGGGCCC----CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEE
T ss_pred ---------C--------------CceEEEEeccccccc----cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcE
Confidence 0 037889999887532 57899999875443 345688999999999999999
Q ss_pred EEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe-eccccCCCCcccccccccceEEEEEEEc
Q 015160 330 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK-TIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 330 wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~-~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
++-+.+..- .....+......++.++|++++.. |+++... ........+... ....+...+++|||+
T Consensus 219 l~i~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~l~arK~ 286 (286)
T 3m70_A 219 NLIVAAMST---DDVPCPLPFSFTFAENELKEYYKD--WEFLEYNENMGELHKTDENG-NRIKMKFATMLARKK 286 (286)
T ss_dssp EEEEEEBCC---SSSCCSSCCSCCBCTTHHHHHTTT--SEEEEEECCEEEEEEECSSC-CEEEEEEEEEEEECC
T ss_pred EEEEEecCC---CCCCCCCCccccCCHHHHHHHhcC--CEEEEEEccCCeeeeccCCC-CEEEEEEEEEEEecC
Confidence 764222110 011111122467899999999954 9988743 111111111110 112345566788885
No 39
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.64 E-value=3.7e-15 Score=139.54 Aligned_cols=157 Identities=14% Similarity=0.135 Sum_probs=110.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
+++.|.+.++.. ++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 49 ~~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 107 (273)
T 3bus_A 49 LTDEMIALLDVR---SGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAA------------------ 107 (273)
T ss_dssp HHHHHHHHSCCC---TTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCCC---CCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc------------------
Confidence 445555555422 5679999999999999999985 899999999999997666322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.+..+|+.++. ...++||+|++...+...++...+|+.++++|||||+++-
T Consensus 108 --------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 164 (273)
T 3bus_A 108 --------------------GLANRVTFSYADAMDLP---FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAI 164 (273)
T ss_dssp --------------------TCTTTEEEEECCTTSCC---SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEE
T ss_pred --------------------CCCcceEEEECccccCC---CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEE
Confidence 01124788999998753 2357999999988777777789999999999999999984
Q ss_pred ecCc----chhhh----hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 333 LGPL----LYHFA----DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 333 ~GPL----lyh~~----~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
..+. ..... ............++.++++++++++||+++...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 214 (273)
T 3bus_A 165 ADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYESDVRQAELVVTSTV 214 (273)
T ss_dssp EEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred EEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHHHHHHcCCeEEEEE
Confidence 3221 11100 000000001235799999999999999998754
No 40
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.64 E-value=6.4e-15 Score=141.17 Aligned_cols=147 Identities=12% Similarity=0.037 Sum_probs=105.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..||++ |..|+|+|+|..|+..++-.+...
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 118 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEV--------------------------------- 118 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHS---------------------------------
T ss_pred CcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc---------------------------------
Confidence 5679999999999999999999 999999999999997776332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh---------hhHHHHHHHHHHhccCCcEEEEecCcch
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA---------HNIVEYIEIISRILKDGGVWINLGPLLY 338 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta---------~Ni~~yl~~I~~~LKPGG~wIN~GPLly 338 (412)
....++.+..+|+.++ .++||+|++...+... .++..+++.++++|||||+++-..+...
T Consensus 119 -----~~~~~v~~~~~d~~~~------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 119 -----DSPRRKEVRIQGWEEF------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp -----CCSSCEEEEECCGGGC------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred -----CCCCceEEEECCHHHc------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 1123478899999876 3789999988644333 5678999999999999999985322111
Q ss_pred hhh--hccC-----------------CCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccC
Q 015160 339 HFA--DLYG-----------------QEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTY 380 (412)
Q Consensus 339 h~~--~~~g-----------------~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y 380 (412)
... ...+ .-| .....+.+++.+++++.||+++........|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~s~~~~~~~l~~aGf~~~~~~~~~~~y 247 (302)
T 3hem_A 188 DKEEAQELGLTSPMSLLRFIKFILTEIFP-GGRLPRISQVDYYSSNAGWKVERYHRIGANY 247 (302)
T ss_dssp CHHHHHHHTCCCCHHHHHHHHHHHHHTCT-TCCCCCHHHHHHHHHHHTCEEEEEEECGGGH
T ss_pred CccchhhccccccccccchHHHHHHhcCC-CCCCCCHHHHHHHHHhCCcEEEEEEeCchhH
Confidence 000 0000 001 1235689999999999999999866443333
No 41
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.64 E-value=3e-15 Score=136.11 Aligned_cols=149 Identities=14% Similarity=0.215 Sum_probs=101.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (217)
T 3jwh_A 29 NARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL----------------------------RLPR 80 (217)
T ss_dssp TCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC----------------------------CCCH
T ss_pred CCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh----------------------------cCCc
Confidence 45699999999999999999987 58999999999998776322100 0000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchh--hhh
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYH--FAD 342 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh--~~~ 342 (412)
. ...++.+..+|+.... ...++||+|++...+. ..+++..+++.++++|||||++|.....-|. +..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 151 (217)
T 3jwh_A 81 N------QWERLQLIQGALTYQD---KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFAN 151 (217)
T ss_dssp H------HHTTEEEEECCTTSCC---GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-
T ss_pred c------cCcceEEEeCCccccc---ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcc
Confidence 0 0114788999975432 2347899999876554 3345689999999999999988853221121 100
Q ss_pred c-cCC--CCCcccCCCHHHHH----HHHHhCCCEEEEEe
Q 015160 343 L-YGQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 374 (412)
Q Consensus 343 ~-~g~--~~~~~ieLS~EEL~----~ll~~~GFeii~e~ 374 (412)
. .+. .......++.+++. +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 152 LPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQFQP 190 (217)
T ss_dssp ----------CCSCBCHHHHHHHHHHHHHHSSEEEEECC
T ss_pred cccccccccccccccCHHHHHHHHHHHHHHcCceEEEEe
Confidence 0 000 11124568999999 99999999997643
No 42
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.64 E-value=1.3e-15 Score=140.98 Aligned_cols=136 Identities=11% Similarity=-0.011 Sum_probs=100.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++...
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~----------------------------------- 77 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL----------------------------------- 77 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS-----------------------------------
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----------------------------------
Confidence 5679999999999999999999 899999999999997655110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchh-------
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYH------- 339 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh------- 339 (412)
.++.+..+|+.++. ..++||+|++...+...++....|+.++++|||||+++-..|-.+.
T Consensus 78 ---------~~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 144 (259)
T 2p35_A 78 ---------PNTNFGKADLATWK----PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAM 144 (259)
T ss_dssp ---------TTSEEEECCTTTCC----CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHH
T ss_pred ---------CCcEEEECChhhcC----ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHH
Confidence 12577889988753 2578999999876666678889999999999999999853331111
Q ss_pred --------hhhccCC-CCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 340 --------FADLYGQ-EDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 340 --------~~~~~g~-~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
+...... .+.....++.+++.++++++||++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~ 186 (259)
T 2p35_A 145 HETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDV 186 (259)
T ss_dssp HHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEE
T ss_pred HHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEE
Confidence 0000000 01112347999999999999998654
No 43
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.64 E-value=7.8e-15 Score=140.36 Aligned_cols=116 Identities=18% Similarity=0.210 Sum_probs=83.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
+.+..+.+.++. ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+...
T Consensus 70 ~~~~~~~~~~~~----~~~~vLDlGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 127 (299)
T 3g2m_A 70 SEAREFATRTGP----VSGPVLELAAGMGRLTFPFLDLGWEVTALELSTSVLAAFRKRLAEA------------------ 127 (299)
T ss_dssp HHHHHHHHHHCC----CCSCEEEETCTTTTTHHHHHTTTCCEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHHhhCC----CCCcEEEEeccCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHhhc------------------
Confidence 344444444432 2348999999999999999999999999999999997766322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-cc--CChhhHHHHHHHHHHhccCCcE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FI--DTAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FI--Dta~Ni~~yl~~I~~~LKPGG~ 329 (412)
++. ...++.++.+|+.++.. .++||+|++.+ .+ -..+++..+|+.++++|||||+
T Consensus 128 --------~~~----------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~ 185 (299)
T 3g2m_A 128 --------PAD----------VRDRCTLVQGDMSAFAL----DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGK 185 (299)
T ss_dssp --------CHH----------HHTTEEEEECBTTBCCC----SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEE
T ss_pred --------ccc----------cccceEEEeCchhcCCc----CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcE
Confidence 000 00247899999988632 57999888653 22 2334678999999999999999
Q ss_pred EEE
Q 015160 330 WIN 332 (412)
Q Consensus 330 wIN 332 (412)
+|-
T Consensus 186 l~~ 188 (299)
T 3g2m_A 186 FLL 188 (299)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 44
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=1.2e-15 Score=144.27 Aligned_cols=138 Identities=17% Similarity=0.083 Sum_probs=101.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++-.+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~------------------------------------- 99 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAATMIEKARQNY------------------------------------- 99 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHhCCCeEEEEECCHHHHHHHHhhC-------------------------------------
Confidence 5679999999999999999999999999999999997654110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchh---h----h
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYH---F----A 341 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh---~----~ 341 (412)
.++.+..+|+.++.. .++||+|++.+.+....+...+|+.++++|||||+++-..|.... + .
T Consensus 100 -------~~~~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 168 (279)
T 3ccf_A 100 -------PHLHFDVADARNFRV----DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALY 168 (279)
T ss_dssp -------TTSCEEECCTTTCCC----SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHH
T ss_pred -------CCCEEEECChhhCCc----CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHH
Confidence 025678889887532 478999999876666667889999999999999999853221100 0 0
Q ss_pred ---hccCC----CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 342 ---DLYGQ----EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 342 ---~~~g~----~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
...+. .+.....++.++++++++++||+++...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 169 NALETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAA 208 (279)
T ss_dssp HHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEE
T ss_pred HHHHhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEE
Confidence 00110 0001234699999999999999998743
No 45
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.63 E-value=3e-15 Score=135.01 Aligned_cols=152 Identities=18% Similarity=0.165 Sum_probs=107.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+...+.+.++ .++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++-..
T Consensus 21 ~~~~l~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~~~D~~~~~~~~~~~~~---------------------- 74 (230)
T 3cc8_A 21 VNPNLLKHIK----KEWKEVLDIGCSSGALGAAIKENGTRVSGIEAFPEAAEQAKEKL---------------------- 74 (230)
T ss_dssp CCHHHHTTCC----TTCSEEEEETCTTSHHHHHHHTTTCEEEEEESSHHHHHHHHTTS----------------------
T ss_pred HHHHHHHHhc----cCCCcEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----------------------
Confidence 3445555554 25679999999999999999999999999999999986554100
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
..+..+|+.++.. +...++||+|++...+....+...+++.++++|||||+++-.
T Consensus 75 ------------------------~~~~~~d~~~~~~-~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~ 129 (230)
T 3cc8_A 75 ------------------------DHVVLGDIETMDM-PYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILAS 129 (230)
T ss_dssp ------------------------SEEEESCTTTCCC-CSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEE
T ss_pred ------------------------CcEEEcchhhcCC-CCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 1346677665321 233578999998876666667789999999999999999864
Q ss_pred cCcchhhh-------hcc-----CC-CCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 334 GPLLYHFA-------DLY-----GQ-EDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 334 GPLlyh~~-------~~~-----g~-~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
.|....+. ... +. .+.....++.++++++++++||+++.....
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 130 IPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRV 185 (230)
T ss_dssp EECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEE
T ss_pred eCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEec
Confidence 44321110 000 00 011123479999999999999999886543
No 46
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.63 E-value=2.4e-15 Score=141.19 Aligned_cols=174 Identities=17% Similarity=0.092 Sum_probs=114.5
Q ss_pred cchHHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHH
Q 015160 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYY 222 (412)
Q Consensus 143 ~d~~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ 222 (412)
.+.......+...+..|.... .....+..+.+.|.++++ ++.+|||+|||+|+++..|+++|+.|+|+|+|..
T Consensus 15 ~~~~~~~~~~a~~Yd~~~~~~--~~~~~~~~~~~~l~~~~~-----~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~ 87 (260)
T 2avn_A 15 LRSWEFYDRIARAYDSMYETP--KWKLYHRLIGSFLEEYLK-----NPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSKE 87 (260)
T ss_dssp CCHHHHHHHHHHHHGGGGCSH--HHHHHHHHHHHHHHHHCC-----SCCEEEEETCTTCHHHHHHHTTTCEEEEEESCHH
T ss_pred hhhcchhhHHHHHHHHhcccc--chhHHHHHHHHHHHHhcC-----CCCeEEEeCCCcCHHHHHHHHcCCeEEEEeCCHH
Confidence 445555566666666665321 112234456677777765 4569999999999999999999999999999999
Q ss_pred HHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEE
Q 015160 223 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVV 302 (412)
Q Consensus 223 ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~Vv 302 (412)
|+..++-... . .+..+|+.++. ...++||+|+
T Consensus 88 ~l~~a~~~~~-------------------------------------------~--~~~~~d~~~~~---~~~~~fD~v~ 119 (260)
T 2avn_A 88 MLEVAREKGV-------------------------------------------K--NVVEAKAEDLP---FPSGAFEAVL 119 (260)
T ss_dssp HHHHHHHHTC-------------------------------------------S--CEEECCTTSCC---SCTTCEEEEE
T ss_pred HHHHHHhhcC-------------------------------------------C--CEEECcHHHCC---CCCCCEEEEE
Confidence 9976551100 0 14667777653 2357899999
Q ss_pred Eecc-cCChhhHHHHHHHHHHhccCCcEEEEecCcchh-hhh--------------ccCC-----CCC--cccCCCHHHH
Q 015160 303 TCFF-IDTAHNIVEYIEIISRILKDGGVWINLGPLLYH-FAD--------------LYGQ-----EDE--MSIELSLEDV 359 (412)
Q Consensus 303 T~FF-IDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh-~~~--------------~~g~-----~~~--~~ieLS~EEL 359 (412)
+... +....+....|+.++++|||||++|-..|-.+. ... ..+. .+. ....++.+||
T Consensus 120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 199 (260)
T 2avn_A 120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDL 199 (260)
T ss_dssp ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGG
T ss_pred EcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHH
Confidence 8652 222245789999999999999999853332220 000 0010 000 0114788999
Q ss_pred HHHHHhCCCEEEEEe
Q 015160 360 KRVALHYGFEFEKEK 374 (412)
Q Consensus 360 ~~ll~~~GFeii~e~ 374 (412)
+++ +||++++..
T Consensus 200 ~~l---aGf~~~~~~ 211 (260)
T 2avn_A 200 DSL---EGFETVDIR 211 (260)
T ss_dssp SSC---TTEEEEEEE
T ss_pred HHh---cCceEEEEE
Confidence 988 899998855
No 47
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.62 E-value=9.7e-15 Score=138.19 Aligned_cols=155 Identities=12% Similarity=0.068 Sum_probs=107.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH-HcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEIS-HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA-~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.++.+.+.++. .++.+|||+|||+|.++..++ +.|..|+|+|+|..|+..++-.+...
T Consensus 52 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~------------------ 110 (287)
T 1kpg_A 52 KIDLALGKLGL---QPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS------------------ 110 (287)
T ss_dssp HHHHHHTTTTC---CTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC------------------
T ss_pred HHHHHHHHcCC---CCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44444444432 256799999999999999999 66999999999999997766322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~w 330 (412)
....++.+..+|+.++ | ++||+|++...+... ++...+|+.++++|||||++
T Consensus 111 --------------------~~~~~~~~~~~d~~~~---~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 164 (287)
T 1kpg_A 111 --------------------ENLRSKRVLLAGWEQF---D---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVM 164 (287)
T ss_dssp --------------------CCCSCEEEEESCGGGC---C---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCCeEEEECChhhC---C---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEE
Confidence 0112478899998764 2 789999988655544 67889999999999999999
Q ss_pred EEecCcchh-----------------hhhcc--CCCCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 331 INLGPLLYH-----------------FADLY--GQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 331 IN~GPLlyh-----------------~~~~~--g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
+-..+.... +.... ...+ .....+.+++.++++++||+++.....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 165 LLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFP-GGRLPSIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp EEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTST-TCCCCCHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEEEecCCCccccccccccccccccchhhhHHheeCC-CCCCCCHHHHHHHHHhCCcEEEEEEeC
Confidence 853221100 00000 0001 012359999999999999999986543
No 48
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.62 E-value=2.6e-14 Score=135.34 Aligned_cols=109 Identities=13% Similarity=0.115 Sum_probs=79.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-.+..... ...
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------------------------~~~----- 107 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRK------------------------EPA----- 107 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTT------------------------SHH-----
T ss_pred CCCEEEEecCCCCHHHHHHHHCCCeEEEEECCHHHHHHHHHhhhhccc------------------------ccc-----
Confidence 456999999999999999999999999999999999776532110000 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccCCh-------hhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFIDTA-------HNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~-FFIDta-------~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.+..+|+.++...-...++||+|++. ..+... .+...+|+.++++|||||++|-
T Consensus 108 ------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 108 ------FDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp ------HHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ------cceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 013677888888764000125799999986 444333 3488999999999999999983
No 49
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.62 E-value=5e-15 Score=129.23 Aligned_cols=130 Identities=15% Similarity=0.063 Sum_probs=98.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++.. .
T Consensus 17 ~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 59 (170)
T 3i9f_A 17 KKGVIVDYGCGNGFYCKYLLEFATKLYCIDINVIALKEVKEK---------------------------------F---- 59 (170)
T ss_dssp CCEEEEEETCTTCTTHHHHHTTEEEEEEECSCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEECCCCCHHHHHHHhhcCeEEEEeCCHHHHHHHHHh---------------------------------C----
Confidence 556999999999999999999998999999999998655511 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
.++.+..+| ..+ ..++||+|++...+...++...+++.++++|||||+++-..+... .. ...+
T Consensus 60 -------~~v~~~~~d-~~~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~---~~-~~~~ 122 (170)
T 3i9f_A 60 -------DSVITLSDP-KEI-----PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKE---NT-GIGP 122 (170)
T ss_dssp -------TTSEEESSG-GGS-----CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSS---CC-SSSS
T ss_pred -------CCcEEEeCC-CCC-----CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcc---cc-ccCc
Confidence 125677888 222 257899999988777777889999999999999999985322111 10 0011
Q ss_pred CcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.....++.++++++++ ||++++..
T Consensus 123 ~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 123 PLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp CGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred hHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 2234589999999997 99998865
No 50
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.62 E-value=8e-15 Score=139.44 Aligned_cols=141 Identities=17% Similarity=0.113 Sum_probs=105.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------------------- 128 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQA--------------------------------- 128 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhc---------------------------------
Confidence 5679999999999999999998 999999999999997766322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhh------
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFA------ 341 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~------ 341 (412)
....++.+..+|+.++. ...++||+|++...+....+...+|+.++++|||||+++-..|...+..
T Consensus 129 -----~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~ 200 (297)
T 2o57_A 129 -----GLADNITVKYGSFLEIP---CEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQ 200 (297)
T ss_dssp -----TCTTTEEEEECCTTSCS---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGH
T ss_pred -----CCCcceEEEEcCcccCC---CCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHH
Confidence 01124788999998763 2357999999987666666788999999999999999986433221100
Q ss_pred ---hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 342 ---DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 342 ---~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.... ..-..+.+++.++++++||++++..
T Consensus 201 ~~~~~~~----~~~~~~~~~~~~~l~~aGf~~~~~~ 232 (297)
T 2o57_A 201 PILDRIK----LHDMGSLGLYRSLAKECGLVTLRTF 232 (297)
T ss_dssp HHHHHHT----CSSCCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHhc----CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 0000 0123589999999999999998754
No 51
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.62 E-value=9.8e-15 Score=135.25 Aligned_cols=156 Identities=10% Similarity=-0.015 Sum_probs=109.5
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+..+.+.++.. .++.+|||+|||+|.++..|++++. .|+|+|+|..|+..++-.+...
T Consensus 32 ~~~~~~l~~l~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------- 92 (257)
T 3f4k_A 32 EATRKAVSFINEL--TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKA----------------- 92 (257)
T ss_dssp HHHHHHHTTSCCC--CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 3445555555422 2567999999999999999999976 9999999999997766322100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...+++.+..+|+.++.. ..++||+|++...+... +..++++.++++|||||+++
T Consensus 93 ---------------------~~~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 93 ---------------------NCADRVKGITGSMDNLPF---QNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIA 147 (257)
T ss_dssp ---------------------TCTTTEEEEECCTTSCSS---CTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEE
T ss_pred ---------------------CCCCceEEEECChhhCCC---CCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEE
Confidence 111237889999977642 35899999988765555 67899999999999999998
Q ss_pred EecCcchhhh------hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NLGPLLYHFA------DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~GPLlyh~~------~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-..|...... ..... ...-..+.+++.++++++||+++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 148 VSEASWFTSERPAEIEDFWMD--AYPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp EEEEEESSSCCCHHHHHHHHH--HCTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeeccCCCChHHHHHHHHH--hCCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 6443211100 00000 00114589999999999999998854
No 52
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.62 E-value=3e-14 Score=129.45 Aligned_cols=149 Identities=15% Similarity=0.259 Sum_probs=101.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|+++..|+++| ..|+|+|+|..|+..++-.+... .+++
T Consensus 29 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------------------~~~~ 80 (219)
T 3jwg_A 29 NAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID----------------------------RLPE 80 (219)
T ss_dssp TCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG----------------------------GSCH
T ss_pred CCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh----------------------------cccc
Confidence 45699999999999999999998 69999999999998776322100 0000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEEecCcchh--hhh
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWINLGPLLYH--FAD 342 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKPGG~wIN~GPLlyh--~~~ 342 (412)
. ...++.+..+|+..+. ...++||+|++...+.... ++..+++.++++|||||++|.....-|. +..
T Consensus 81 ~------~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~ 151 (219)
T 3jwg_A 81 M------QRKRISLFQSSLVYRD---KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGN 151 (219)
T ss_dssp H------HHTTEEEEECCSSSCC---GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCC
T ss_pred c------cCcceEEEeCcccccc---cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcc
Confidence 0 0014788999985532 2357899999876554433 4679999999999999988753221110 100
Q ss_pred cc-CC--CCCcccCCCHHHHH----HHHHhCCCEEEEEe
Q 015160 343 LY-GQ--EDEMSIELSLEDVK----RVALHYGFEFEKEK 374 (412)
Q Consensus 343 ~~-g~--~~~~~ieLS~EEL~----~ll~~~GFeii~e~ 374 (412)
.. +. .......++.++++ +++++.||+++...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 152 LFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVRFLQ 190 (219)
T ss_dssp T-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCcccccccCceeeecHHHHHHHHHHHHHHCCcEEEEEe
Confidence 00 00 01124567999999 88999999887654
No 53
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.60 E-value=1.2e-14 Score=136.49 Aligned_cols=156 Identities=11% Similarity=0.009 Sum_probs=109.5
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+..+.+.++.. .++.+|||+|||+|.++..||+++. .|+|+|+|..|+..++..+...
T Consensus 32 ~~~~~~l~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~----------------- 92 (267)
T 3kkz_A 32 EVTLKALSFIDNL--TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQS----------------- 92 (267)
T ss_dssp HHHHHHHTTCCCC--CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhcccC--CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHc-----------------
Confidence 3445455555421 2678999999999999999999976 8999999999997766332110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...+++.+..+|+.++.. ..++||+|++...+... +...+++.++++|||||+++
T Consensus 93 ---------------------~~~~~v~~~~~d~~~~~~---~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 93 ---------------------GLQNRVTGIVGSMDDLPF---RNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLA 147 (267)
T ss_dssp ---------------------TCTTTEEEEECCTTSCCC---CTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEE
T ss_pred ---------------------CCCcCcEEEEcChhhCCC---CCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEE
Confidence 111347899999987642 35899999987655444 67899999999999999998
Q ss_pred EecCcchhhh------hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NLGPLLYHFA------DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~GPLlyh~~------~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-..+...... .... ....-..+.+++.++++++||+++...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (267)
T 3kkz_A 148 VSECSWFTDERPAEINDFWM--DAYPEIDTIPNQVAKIHKAGYLPVATF 194 (267)
T ss_dssp EEEEEESSSCCCHHHHHHHH--HHCTTCEEHHHHHHHHHHTTEEEEEEE
T ss_pred EEEeeecCCCChHHHHHHHH--HhCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 6433211000 0000 000123589999999999999998855
No 54
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.60 E-value=2e-14 Score=138.83 Aligned_cols=155 Identities=13% Similarity=-0.020 Sum_probs=108.3
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCC
Q 015160 176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLS 254 (412)
Q Consensus 176 ~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s 254 (412)
+.+.+.++.. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+...
T Consensus 106 ~~l~~~l~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------- 163 (312)
T 3vc1_A 106 EFLMDHLGQA--GPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRAREL-------------------- 163 (312)
T ss_dssp HHHHTTSCCC--CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------
T ss_pred HHHHHHhccC--CCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc--------------------
Confidence 4455555421 25679999999999999999999 999999999999997766322110
Q ss_pred cccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 015160 255 DSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 334 (412)
Q Consensus 255 ~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~G 334 (412)
....++.+..+|+.++. ...++||+|++...+... +...+|+.++++|||||++|-..
T Consensus 164 ------------------~~~~~v~~~~~d~~~~~---~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 164 ------------------RIDDHVRSRVCNMLDTP---FDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ------------------TCTTTEEEEECCTTSCC---CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------------CCCCceEEEECChhcCC---CCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEE
Confidence 11124789999998753 235899999988655544 38899999999999999998543
Q ss_pred CcchhhhhccC------CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 335 PLLYHFADLYG------QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 335 PLlyh~~~~~g------~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+.......... ......-..+.++++++++++||+++...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~aGf~~~~~~ 267 (312)
T 3vc1_A 222 GCWNPRYGQPSKWVSQINAHFECNIHSRREYLRAMADNRLVPHTIV 267 (312)
T ss_dssp EEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHHHHHTTTEEEEEEE
T ss_pred ccccccccchhHHHHHHHhhhcCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 32111000000 00000124689999999999999998854
No 55
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.60 E-value=5.5e-15 Score=136.84 Aligned_cols=159 Identities=14% Similarity=0.162 Sum_probs=111.2
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.|..+++.|....... .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.
T Consensus 22 ~~~~~~~~l~~~~~~~--~~~~~vLDiG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~----------------- 82 (263)
T 2yqz_A 22 VAGQIATAMASAVHPK--GEEPVFLELGVGTGRIALPLIARGYRYIALDADAAMLEVFRQKIA----------------- 82 (263)
T ss_dssp HHHHHHHHHHHHCCCS--SSCCEEEEETCTTSTTHHHHHTTTCEEEEEESCHHHHHHHHHHTT-----------------
T ss_pred HHHHHHHHHHHhhcCC--CCCCEEEEeCCcCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-----------------
Confidence 3556777775422211 256799999999999999999999999999999999976652210
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~ 329 (412)
....++.+..+|+.++. ...++||+|++.+.+...++...+++.++++|||||+
T Consensus 83 -----------------------~~~~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 83 -----------------------GVDRKVQVVQADARAIP---LPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp -----------------------TSCTTEEEEESCTTSCC---SCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred -----------------------ccCCceEEEEcccccCC---CCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcE
Confidence 00123788999987753 2357899999987776666788999999999999999
Q ss_pred EEEe-cCc---c---hh--hh---hccCCC-CCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 330 WINL-GPL---L---YH--FA---DLYGQE-DEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 330 wIN~-GPL---l---yh--~~---~~~g~~-~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
++-. +.. . +. +. ...|.+ +......+.+++.++++++||+++..
T Consensus 137 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~ 193 (263)
T 2yqz_A 137 LLEGWDQAEASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGLKPRTR 193 (263)
T ss_dssp EEEEEEEECCCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEEEecCCCccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCCCcceE
Confidence 9852 110 0 00 10 011211 00122468899999999999997763
No 56
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.60 E-value=1.2e-14 Score=140.08 Aligned_cols=153 Identities=12% Similarity=0.008 Sum_probs=107.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.++.+.+.++. .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++..+...
T Consensus 78 ~~~~~~~~~~~---~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------ 136 (318)
T 2fk8_A 78 KVDLNLDKLDL---KPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASI------------------ 136 (318)
T ss_dssp HHHHHHTTSCC---CTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTS------------------
T ss_pred HHHHHHHhcCC---CCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------------------
Confidence 44445544432 25679999999999999999998 999999999999998776332100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~w 330 (412)
....++.+..+|+.++ .++||+|++...+... ++...+|+.+.++|||||++
T Consensus 137 --------------------~~~~~v~~~~~d~~~~------~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 190 (318)
T 2fk8_A 137 --------------------DTNRSRQVLLQGWEDF------AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRM 190 (318)
T ss_dssp --------------------CCSSCEEEEESCGGGC------CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEE
T ss_pred --------------------CCCCceEEEECChHHC------CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEE
Confidence 0112378899998765 1689999988765544 67899999999999999999
Q ss_pred EEecCcchhhh-----------------hcc--CCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 331 INLGPLLYHFA-----------------DLY--GQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 331 IN~GPLlyh~~-----------------~~~--g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+-..|...... +.. ..-+ .....+.+++.++++++||++++..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 191 TVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFP-GGRLPSTEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp EEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTST-TCCCCCHHHHHHHHHHTTCBCCCCE
T ss_pred EEEEeccCCchhhhhccccccccccchhhHHHHhcCC-CCcCCCHHHHHHHHHhCCCEEEEEE
Confidence 85322211100 000 0001 1223599999999999999998754
No 57
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.60 E-value=3.4e-14 Score=128.72 Aligned_cols=127 Identities=15% Similarity=0.139 Sum_probs=95.4
Q ss_pred CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccc
Q 015160 159 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAG 238 (412)
Q Consensus 159 WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~ 238 (412)
|++....+.......+++.|.+.++ ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~vLDlG~G~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~---- 83 (227)
T 1ve3_A 13 YTDINSQEYRSRIETLEPLLMKYMK-----KRGKVLDLACGVGGFSFLLEDYGFEVVGVDISEDMIRKAREYAKSR---- 83 (227)
T ss_dssp TTCTTSHHHHHHHHHHHHHHHHSCC-----SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----
T ss_pred hhcccHHHHHHHHHHHHHHHHHhcC-----CCCeEEEEeccCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc----
Confidence 4443333333445677788877765 3569999999999999999999999999999999997766322100
Q ss_pred cccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc--cCChhhHHHH
Q 015160 239 EWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHNIVEY 316 (412)
Q Consensus 239 ~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~Ni~~y 316 (412)
..++.+..+|+.++.. ..++||+|++... +....+..++
T Consensus 84 ------------------------------------~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~~~~~~~~~~~~~ 124 (227)
T 1ve3_A 84 ------------------------------------ESNVEFIVGDARKLSF---EDKTFDYVIFIDSIVHFEPLELNQV 124 (227)
T ss_dssp ------------------------------------TCCCEEEECCTTSCCS---CTTCEEEEEEESCGGGCCHHHHHHH
T ss_pred ------------------------------------CCCceEEECchhcCCC---CCCcEEEEEEcCchHhCCHHHHHHH
Confidence 0136788999887532 3578999998765 5566778899
Q ss_pred HHHHHHhccCCcEEEEe
Q 015160 317 IEIISRILKDGGVWINL 333 (412)
Q Consensus 317 l~~I~~~LKPGG~wIN~ 333 (412)
++.++++|||||++|-.
T Consensus 125 l~~~~~~L~~gG~l~~~ 141 (227)
T 1ve3_A 125 FKEVRRVLKPSGKFIMY 141 (227)
T ss_dssp HHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHcCCCcEEEEE
Confidence 99999999999999853
No 58
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.60 E-value=1.9e-14 Score=133.39 Aligned_cols=143 Identities=15% Similarity=0.168 Sum_probs=103.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+... .
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------- 67 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVASSFAQEK--------------------------G------- 67 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCEEEEEccCcCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999999999999999999997766322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc------hhhhh
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL------YHFAD 342 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLl------yh~~~ 342 (412)
..++.+..+|+.++. ...++||+|++.+.+....++...|+.++++|||||+++-..+.. ..+..
T Consensus 68 ------~~~v~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 138 (239)
T 1xxl_A 68 ------VENVRFQQGTAESLP---FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVN 138 (239)
T ss_dssp ------CCSEEEEECBTTBCC---SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHH
T ss_pred ------CCCeEEEecccccCC---CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHH
Confidence 013678899987753 235899999988766555678899999999999999998532211 00100
Q ss_pred ccC--CCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 343 LYG--QEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 343 ~~g--~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
... ..+.....++.+++.++++++||+++..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~ 171 (239)
T 1xxl_A 139 HLNRLRDPSHVRESSLSEWQAMFSANQLAYQDI 171 (239)
T ss_dssp HHHHHHCTTCCCCCBHHHHHHHHHHTTEEEEEE
T ss_pred HHHHhccccccCCCCHHHHHHHHHHCCCcEEEE
Confidence 000 0011123579999999999999998874
No 59
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.58 E-value=2.8e-14 Score=135.99 Aligned_cols=155 Identities=14% Similarity=0.071 Sum_probs=110.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
+++.+.+.+... .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-....
T Consensus 9 ~~~~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~----------------- 69 (284)
T 3gu3_A 9 YVSFLVNTVWKI--TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL----------------- 69 (284)
T ss_dssp HHHHHHHTTSCC--CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-----------------
T ss_pred HHHHHHHHHhcc--CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-----------------
Confidence 555666555322 25679999999999999999998 78999999999999766622210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~w 330 (412)
.+.++.+..+|+.++.. .++||+|++...+...++...+++.++++|||||++
T Consensus 70 -----------------------~~~~v~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l 122 (284)
T 3gu3_A 70 -----------------------LPYDSEFLEGDATEIEL----NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKI 122 (284)
T ss_dssp -----------------------SSSEEEEEESCTTTCCC----SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEE
T ss_pred -----------------------cCCceEEEEcchhhcCc----CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEE
Confidence 01147899999988542 468999999887777778889999999999999999
Q ss_pred EEecCcc----hhhhhccCC------------------CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 331 INLGPLL----YHFADLYGQ------------------EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 331 IN~GPLl----yh~~~~~g~------------------~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+-..|.. ..+..+.+. .....-..+.+++.++++++||+.+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGF~~v~~~ 188 (284)
T 3gu3_A 123 ICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKIPIYLSELGVKNIECR 188 (284)
T ss_dssp EEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTHHHHHHHTTCEEEEEE
T ss_pred EEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHHHHHHHHcCCCeEEEE
Confidence 9655431 001000000 0000112356789999999999988763
No 60
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=1e-14 Score=137.22 Aligned_cols=152 Identities=13% Similarity=0.087 Sum_probs=106.7
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
+..+.+.|.+.++.. ++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++ +.
T Consensus 19 ~~~~~~~l~~~~~~~---~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~-------~~------------- 75 (261)
T 3ege_A 19 DIRIVNAIINLLNLP---KGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQAV-------VH------------- 75 (261)
T ss_dssp CHHHHHHHHHHHCCC---TTCEEEEETCTTSHHHHHHHTTTCEEEEECSCHHHHHSSC-------CC-------------
T ss_pred cHHHHHHHHHHhCCC---CCCEEEEEcCcccHHHHHHHhCCCEEEEEeCCHHHHHHHH-------hc-------------
Confidence 345667777666532 5679999999999999999999999999999999974221 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~w 330 (412)
.++.+..+|+.++. ...++||+|++.+.+....+...+++.++++|| ||++
T Consensus 76 -------------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~ 126 (261)
T 3ege_A 76 -------------------------PQVEWFTGYAENLA---LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTI 126 (261)
T ss_dssp -------------------------TTEEEECCCTTSCC---SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCE
T ss_pred -------------------------cCCEEEECchhhCC---CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEE
Confidence 03788999988753 235899999998866666788999999999999 9966
Q ss_pred EE--ecCc----chhhhhccC-CCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 331 IN--LGPL----LYHFADLYG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 331 IN--~GPL----lyh~~~~~g-~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
+- .+|- .|....... .........+.+++. +++++||+.+....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 127 VLLTFDIRLAQRIWLYDYFPFLWEDALRFLPLDEQIN-LLQENTKRRVEAIP 177 (261)
T ss_dssp EEEEECGGGCCCCGGGGTCHHHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEE
T ss_pred EEEEcCCchhHHHHHHHHHHHHhhhhhhhCCCHHHHH-HHHHcCCCceeEEE
Confidence 53 2221 111000000 000012235778899 99999999887653
No 61
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.56 E-value=2.1e-14 Score=128.72 Aligned_cols=156 Identities=19% Similarity=0.135 Sum_probs=105.8
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh-HHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL-ALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRL-a~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
.|..+++.+...- ++.+|||+|||+|.+ ...++..|+.|+|+|+|..|+..++..+...
T Consensus 10 ~~~~~~~~~~~~~------~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-------------- 69 (209)
T 2p8j_A 10 QLYRFLKYCNESN------LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN-------------- 69 (209)
T ss_dssp HHHHHHHHHHHSS------SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH--------------
T ss_pred hHHHHHHHHhccC------CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--------------
Confidence 3556777666432 456999999999998 5677888999999999999997766322100
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccC
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKD 326 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKP 326 (412)
..++.+..+|+.++.. ..++||+|++...+. ...+...+++.++++|||
T Consensus 70 --------------------------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkp 120 (209)
T 2p8j_A 70 --------------------------NFKLNISKGDIRKLPF---KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKP 120 (209)
T ss_dssp --------------------------TCCCCEEECCTTSCCS---CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEE
T ss_pred --------------------------CCceEEEECchhhCCC---CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCC
Confidence 0125678889887532 357899999764322 246788999999999999
Q ss_pred CcEEEEe--cC--cchh---------hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 327 GGVWINL--GP--LLYH---------FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 327 GG~wIN~--GP--Llyh---------~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
||+++-. .+ ..|. |.......+.....++.+|+..++...||...++.
T Consensus 121 gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 121 GGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp EEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred CcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 9999842 11 1110 00000001111235799999999999999887754
No 62
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.56 E-value=9.8e-14 Score=133.51 Aligned_cols=145 Identities=10% Similarity=0.040 Sum_probs=99.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..||.. |..|+|+|+|..|+..++-.+...
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------------------------------- 166 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH------------------------------- 166 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-------------------------------
Confidence 5679999999999999999622 669999999999997766322100
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEEEec----Cc--
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWINLG----PL-- 336 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~I~~~LKPGG~wIN~G----PL-- 336 (412)
...+++.++.+|+.++.. . ++||+|++.. ++.......++++.++++|||||++|-.. |.
T Consensus 167 -------~~~~~v~~~~~d~~~~~~---~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 235 (305)
T 3ocj_A 167 -------ALAGQITLHRQDAWKLDT---R-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALS 235 (305)
T ss_dssp -------TTGGGEEEEECCGGGCCC---C-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTC
T ss_pred -------CCCCceEEEECchhcCCc---c-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCccc
Confidence 112347899999988642 2 8999999864 34444555568999999999999998421 11
Q ss_pred -chhhh-hcc--------------CCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 337 -LYHFA-DLY--------------GQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 337 -lyh~~-~~~--------------g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
.+.|. +.. .........++.++++++++++||++++...
T Consensus 236 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~ 290 (305)
T 3ocj_A 236 PDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQTRAQLEEAGFTDLRFED 290 (305)
T ss_dssp TTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHHHHHHHHHTTCEEEEEEC
T ss_pred ccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHHHHHHHHHCCCEEEEEEc
Confidence 11110 000 0000011236999999999999999988663
No 63
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.56 E-value=2.4e-13 Score=122.63 Aligned_cols=124 Identities=17% Similarity=0.005 Sum_probs=94.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..+|++| ..|+|+|+|..|+..++..+... +
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 88 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF--------------------------V----- 88 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh--------------------------C-----
Confidence 56799999999999999999998 89999999999997776322110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~ 346 (412)
..++.+..+|+.+... ..+.||+|+....+. ++.++++.+.++|||||+++-..+.
T Consensus 89 --------~~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~---------- 144 (204)
T 3e05_A 89 --------ARNVTLVEAFAPEGLD---DLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVT---------- 144 (204)
T ss_dssp --------CTTEEEEECCTTTTCT---TSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECB----------
T ss_pred --------CCcEEEEeCChhhhhh---cCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecc----------
Confidence 0237788999876543 136799998765443 6779999999999999999853221
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
.-+.+++.+++++.||++...
T Consensus 145 ------~~~~~~~~~~l~~~g~~~~~~ 165 (204)
T 3e05_A 145 ------LDTLTKAVEFLEDHGYMVEVA 165 (204)
T ss_dssp ------HHHHHHHHHHHHHTTCEEEEE
T ss_pred ------cccHHHHHHHHHHCCCceeEE
Confidence 124678889999999955443
No 64
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.54 E-value=5.2e-14 Score=132.21 Aligned_cols=144 Identities=13% Similarity=0.163 Sum_probs=103.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-.+... +
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 85 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN--------------------------G----- 85 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--------------------------T-----
T ss_pred CCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-----
Confidence 5679999999999999999999 689999999999997766332110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecC----cchhhhh
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP----LLYHFAD 342 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GP----Llyh~~~ 342 (412)
..++.+..+|+.++.. ..++||+|++...+....+...+++.++++|||||+++-..| ..++-..
T Consensus 86 --------~~~~~~~~~d~~~~~~---~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~ 154 (276)
T 3mgg_A 86 --------IKNVKFLQANIFSLPF---EDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEG 154 (276)
T ss_dssp --------CCSEEEEECCGGGCCS---CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCC
T ss_pred --------CCCcEEEEcccccCCC---CCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCc
Confidence 0137889999887542 358999999988777777788999999999999999985321 1111000
Q ss_pred c---------cC-CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 343 L---------YG-QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 343 ~---------~g-~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
. .. ......-.++.+++.++++++||+++..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~v~~~ 196 (276)
T 3mgg_A 155 KKAIEAWNCLIRVQAYMKGNSLVGRQIYPLLQESGFEKIRVE 196 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTGGGGHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHCCCCeEEEe
Confidence 0 00 00000123567899999999999998855
No 65
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.54 E-value=2.1e-14 Score=137.47 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=84.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.+++.|.++.+ .+.+|||+|||+|.++..|+++|.+|+|+|+|..||..|+ +
T Consensus 28 ~l~~~l~~~~~-----~~~~vLDvGcGtG~~~~~l~~~~~~v~gvD~s~~ml~~a~-------~---------------- 79 (257)
T 4hg2_A 28 ALFRWLGEVAP-----ARGDALDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL-------R---------------- 79 (257)
T ss_dssp HHHHHHHHHSS-----CSSEEEEESCTTTTTHHHHHTTCSEEEEEESCHHHHHTCC-------C----------------
T ss_pred HHHHHHHHhcC-----CCCCEEEEcCCCCHHHHHHHHhCCEEEEEeCcHHhhhhhh-------h----------------
Confidence 36788888766 3468999999999999999999999999999999984211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.+..+|+.++.. .+++||+|++..-+.-. +...++++++++|||||+++-
T Consensus 80 ----------------------~~~v~~~~~~~e~~~~---~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~ 133 (257)
T 4hg2_A 80 ----------------------HPRVTYAVAPAEDTGL---PPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAA 133 (257)
T ss_dssp ----------------------CTTEEEEECCTTCCCC---CSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEE
T ss_pred ----------------------cCCceeehhhhhhhcc---cCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEE
Confidence 0137889999887643 46899999987644433 466899999999999999974
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.53 E-value=2.6e-14 Score=137.52 Aligned_cols=199 Identities=14% Similarity=0.192 Sum_probs=112.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhccccc------------------------ccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETA------------------------GEWNI 242 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~------------------------~~~~I 242 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+...... ....-
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 4679999999999999999998 789999999999998887443211000 00001
Q ss_pred cccccccCCCCCcccCccccccCCCCC---CCCCCCCceeEEecccccccC--CCCCCCCccEEEEeccc---C---Chh
Q 015160 243 YPWIHSNCNSLSDSDQLRPVSIPDIHP---ASAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFI---D---TAH 311 (412)
Q Consensus 243 ~P~i~~~sn~~s~~~qlr~v~iPDv~p---~~~~~~~~~s~~~GDF~ely~--~~~~~~~fD~VvT~FFI---D---ta~ 311 (412)
||.... ....++..|.... .....+.++.+..+|+..... .+...++||+|++...+ + ...
T Consensus 126 ~p~~~~--------~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~ 197 (292)
T 3g07_A 126 FPASLT--------ASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDE 197 (292)
T ss_dssp ------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHH
T ss_pred ccchhh--------hccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHH
Confidence 111100 0011112222111 011233579999999985320 01235799999987643 3 444
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCcchh-hhhccCCC-----CCcccCCCHHHHHHHHHh--CCCEEEEEeeccccCCCC
Q 015160 312 NIVEYIEIISRILKDGGVWINLGPLLYH-FADLYGQE-----DEMSIELSLEDVKRVALH--YGFEFEKEKTIETTYTTN 383 (412)
Q Consensus 312 Ni~~yl~~I~~~LKPGG~wIN~GPLlyh-~~~~~g~~-----~~~~ieLS~EEL~~ll~~--~GFeii~e~~i~s~Y~~d 383 (412)
++.++|+.++++|||||++|- .|..|. +....... ....+.+..+++..++.+ +||+.++.-... ..
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil-~~~~~~~y~~~~~~~~~~~~~~~~~~~~p~~~~~~L~~~~~GF~~~~~~~~~-~~--- 272 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVL-EPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATP-HN--- 272 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEE-ECCCHHHHHTTTTSCHHHHHHHHHCCCCGGGHHHHHTSTTTCCCEEEEC---------
T ss_pred HHHHHHHHHHHHhCCCcEEEE-ecCCchhhhhhhcccHHHHhhhhcEEEcHHHHHHHHHhcCCCceEEEEeccC-CC---
Confidence 788999999999999999984 333333 11100000 011456788999999998 999877643211 01
Q ss_pred cccccccccceEEEEEEEcCc
Q 015160 384 PRSMMQNRYFTAFWTMRKKSV 404 (412)
Q Consensus 384 ~~sm~~~~Y~~~f~VarK~~~ 404 (412)
....+....++.+|+..
T Consensus 273 ----~~~g~~r~i~~~~k~~~ 289 (292)
T 3g07_A 273 ----TSKGFQRPVYLFHKARS 289 (292)
T ss_dssp ----------CCCEEEECCC-
T ss_pred ----CCCCccceEEEEEcCCC
Confidence 12345566667777643
No 67
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=1.3e-13 Score=127.29 Aligned_cols=142 Identities=13% Similarity=-0.063 Sum_probs=98.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..||++|..|+|+|+|..|+..++-.+.
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~~~v~gvD~s~~~~~~a~~~~~------------------------------------ 99 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFFPRVIGLDVSKSALEIAAKENT------------------------------------ 99 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHSSCEEEEESCHHHHHHHHHHSC------------------------------------
T ss_pred CCCeEEEEcCCCCHHHHHHHHhCCCEEEEECCHHHHHHHHHhCc------------------------------------
Confidence 56789999999999999999999999999999999976652110
Q ss_pred CCCCCCCCceeEEecccccccCCC-C-CCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcEEEE--ecCcc----h
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDP-S-QVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGVWIN--LGPLL----Y 338 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~-~-~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKPGG~wIN--~GPLl----y 338 (412)
..++.+..+|+.++.... . ....||+|++...+.... +...+|+.++++|||||+++- ++.-- -
T Consensus 100 ------~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~ 173 (245)
T 3ggd_A 100 ------AANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFN 173 (245)
T ss_dssp ------CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHH
T ss_pred ------ccCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHH
Confidence 013778899988753210 0 012489999876554443 788999999999999998663 22110 0
Q ss_pred hhhhccCCCC----------CcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 339 HFADLYGQED----------EMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 339 h~~~~~g~~~----------~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
......+..+ .....++.+|+.+++ .||+++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--aGf~~~~~~ 217 (245)
T 3ggd_A 174 SLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF--PDFEILSQG 217 (245)
T ss_dssp HHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC--TTEEEEEEE
T ss_pred HHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh--CCCEEEecc
Confidence 0000001111 012347999999999 899999865
No 68
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.53 E-value=5.9e-14 Score=140.69 Aligned_cols=157 Identities=17% Similarity=0.094 Sum_probs=106.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+.+.+.+.++.. ++.+|||+|||+|+++..|+++|+.|+|+|+|..|+..++-. . .
T Consensus 93 ~~~~~~l~~~~~~~---~~~~VLDiGcG~G~~~~~l~~~g~~v~gvD~s~~~~~~a~~~-------~-~----------- 150 (416)
T 4e2x_A 93 AMLARDFLATELTG---PDPFIVEIGCNDGIMLRTIQEAGVRHLGFEPSSGVAAKAREK-------G-I----------- 150 (416)
T ss_dssp HHHHHHHHHTTTCS---SSCEEEEETCTTTTTHHHHHHTTCEEEEECCCHHHHHHHHTT-------T-C-----------
T ss_pred HHHHHHHHHHhCCC---CCCEEEEecCCCCHHHHHHHHcCCcEEEECCCHHHHHHHHHc-------C-C-----------
Confidence 34555666655422 567999999999999999999999999999999999765511 0 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
+... ..+..++..++. ...++||+|++...+...+++..+|+.++++|||||+++
T Consensus 151 -------------~~~~---------~~~~~~~~~~l~---~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~ 205 (416)
T 4e2x_A 151 -------------RVRT---------DFFEKATADDVR---RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFV 205 (416)
T ss_dssp -------------CEEC---------SCCSHHHHHHHH---HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred -------------Ccce---------eeechhhHhhcc---cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEE
Confidence 0000 011223333332 124789999999877777789999999999999999999
Q ss_pred EecCcchhhhhc--cC-CCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 332 NLGPLLYHFADL--YG-QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 332 N~GPLlyh~~~~--~g-~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
-..|..-..... +. ...+....++.++++.+++++||+++....
T Consensus 206 i~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 206 FEDPYLGDIVAKTSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EEEECHHHHHHHTCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEeCChHHhhhhcchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 643322111000 00 001113357999999999999999988654
No 69
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.53 E-value=6.1e-14 Score=126.88 Aligned_cols=131 Identities=10% Similarity=0.024 Sum_probs=94.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..|+++|..|+|+|+|..|+..++..+..
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~----------------------------------- 95 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAPHCKRLTVIDVMPRAIGRACQRTKR----------------------------------- 95 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGGGEEEEEEEESCHHHHHHHHHHTTT-----------------------------------
T ss_pred CCCcEEEEcCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHhccc-----------------------------------
Confidence 567999999999999999999999999999999999766522100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc---cCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF---IDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF---IDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.++.. .++||+|++... +.....+..+|+.++++|||||++|-..|.--.....
T Consensus 96 ------~~~~~~~~~d~~~~~~----~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-- 163 (216)
T 3ofk_A 96 ------WSHISWAATDILQFST----AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSARDATCRRW-- 163 (216)
T ss_dssp ------CSSEEEEECCTTTCCC----SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHT--
T ss_pred ------CCCeEEEEcchhhCCC----CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecCCCcchhh--
Confidence 0137889999988642 589999998854 4444556788999999999999998533322111110
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
......+.+..++.. +|..++
T Consensus 164 -----~~~~~~~~~~~~~~~-~~~~~e 184 (216)
T 3ofk_A 164 -----GHVAGAETVITILTE-ALTEVE 184 (216)
T ss_dssp -----TCSCCHHHHHHHHHH-HSEEEE
T ss_pred -----hhhhhHHHHHHHHHh-hccceE
Confidence 113567778787765 455544
No 70
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.53 E-value=7.5e-14 Score=139.59 Aligned_cols=150 Identities=18% Similarity=0.158 Sum_probs=103.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccc-ccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP-VSI 264 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~-v~i 264 (412)
++.+|||+|||+|+++..|+++ +..|+|+|+|..|+..++-.+...... . .+ .
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~--~-------------------~g~~-- 139 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK--F-------------------FGSP-- 139 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH--H-------------------HSST--
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh--c-------------------cccc--
Confidence 5679999999999999999986 679999999999998776332110000 0 00 0
Q ss_pred CCCCCCCCCCCCceeEEecccccccCC---CCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc----
Q 015160 265 PDIHPASAGITEGFSMCGGDFVEVYSD---PSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL---- 337 (412)
Q Consensus 265 PDv~p~~~~~~~~~s~~~GDF~ely~~---~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLl---- 337 (412)
...++.+..+|+.++... +...++||+|++...+...++...+|+.++++|||||+++-..+..
T Consensus 140 ---------~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~ 210 (383)
T 4fsd_A 140 ---------SRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL 210 (383)
T ss_dssp ---------TCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC
T ss_pred ---------CCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc
Confidence 012478999999876211 2346899999998877766778899999999999999998432110
Q ss_pred -hhhhhc---cCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 338 -YHFADL---YGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 338 -yh~~~~---~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
-..... .+.. ..-.++.+++.++++++||++++
T Consensus 211 ~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~aGF~~v~ 247 (383)
T 4fsd_A 211 SEAAQQDPILYGEC--LGGALYLEDFRRLVAEAGFRDVR 247 (383)
T ss_dssp CHHHHHCHHHHHTT--CTTCCBHHHHHHHHHHTTCCCEE
T ss_pred CHhHhhhHHHhhcc--cccCCCHHHHHHHHHHCCCceEE
Confidence 000000 0000 11247889999999999998765
No 71
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.52 E-value=8.2e-14 Score=125.54 Aligned_cols=134 Identities=16% Similarity=0.183 Sum_probs=101.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
.+++.|...++ ++.+|||+|||+|+++..|++.|. .|+|+|+|..|+..++..+...
T Consensus 49 ~~~~~l~~~~~-----~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~----------------- 106 (205)
T 3grz_A 49 LAMLGIERAMV-----KPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALN----------------- 106 (205)
T ss_dssp HHHHHHHHHCS-----SCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-----------------
T ss_pred HHHHHHHHhcc-----CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-----------------
Confidence 36666666553 457999999999999999999988 8999999999997776322110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
. ..++.+..+|+.+.. .++||+|++...+ +.+..+++.++++|||||+++
T Consensus 107 ---------~-------------~~~v~~~~~d~~~~~-----~~~fD~i~~~~~~---~~~~~~l~~~~~~L~~gG~l~ 156 (205)
T 3grz_A 107 ---------G-------------IYDIALQKTSLLADV-----DGKFDLIVANILA---EILLDLIPQLDSHLNEDGQVI 156 (205)
T ss_dssp ---------T-------------CCCCEEEESSTTTTC-----CSCEEEEEEESCH---HHHHHHGGGSGGGEEEEEEEE
T ss_pred ---------C-------------CCceEEEeccccccC-----CCCceEEEECCcH---HHHHHHHHHHHHhcCCCCEEE
Confidence 0 012678899987742 3789999987543 346788999999999999998
Q ss_pred EecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-.++ ..-+.+++.+++++.||+++...
T Consensus 157 ~~~~----------------~~~~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 157 FSGI----------------DYLQLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp EEEE----------------EGGGHHHHHHHHHHTTEEEEEEE
T ss_pred EEec----------------CcccHHHHHHHHHHcCCceEEee
Confidence 5221 11257889999999999998754
No 72
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.51 E-value=1.1e-13 Score=135.09 Aligned_cols=151 Identities=13% Similarity=0.038 Sum_probs=94.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..+++.| ..|+|+|+|..||..|+-..... . .. .+.+.
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~---~-~~---------------~~~~~------ 102 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKL---N-SG---------------IKTKY------ 102 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH---C-C-------------------CC------
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhc---c-cc---------------ccccc------
Confidence 46799999999999777776665 78999999999998887332110 0 00 00000
Q ss_pred CCCCCCCCCceeEEeccc------ccccCCCCCCCCccEEEEeccc----CChhhHHHHHHHHHHhccCCcEEEEecCc-
Q 015160 268 HPASAGITEGFSMCGGDF------VEVYSDPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRILKDGGVWINLGPL- 336 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF------~ely~~~~~~~~fD~VvT~FFI----Dta~Ni~~yl~~I~~~LKPGG~wIN~GPL- 336 (412)
-++.|.++|+ .++.. +...++||+|++.|-+ ++ +++..+|+.++++|||||++|-..|-
T Consensus 103 --------~~~~f~~~d~~~d~~~~~l~~-~~~~~~FD~V~~~~~lhy~~~~-~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 103 --------YKFDYIQETIRSDTFVSSVRE-VFYFGKFNIIDWQFAIHYSFHP-RHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp --------CEEEEEECCTTSSSHHHHHHT-TCCSSCEEEEEEESCGGGTCST-TTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred --------cccchhhhhcccchhhhhhhc-cccCCCeeEEEECchHHHhCCH-HHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 0134555555 22211 1125799999876533 33 35789999999999999999853331
Q ss_pred ---chhhhh-----------------c----------c---C-CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 337 ---LYHFAD-----------------L----------Y---G-QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 337 ---lyh~~~-----------------~----------~---g-~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+.+.. . + + ..+-..+-.+.++|+++++++||+++...
T Consensus 173 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~ 244 (302)
T 2vdw_A 173 DKLSKLTDKKTFIIHKNLPSSENYMSVEKIADDRIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNV 244 (302)
T ss_dssp HHHTTCCSCEEEECCSSSCTTTSEEEECEEETTEEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHhcCCcccccccccccceeeeccccccccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEec
Confidence 111100 0 0 0 01101134678999999999999998865
No 73
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.50 E-value=5.3e-14 Score=130.19 Aligned_cols=151 Identities=17% Similarity=0.088 Sum_probs=97.5
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
+++..+...++. ++.+|||+|||+|.++..|++.|. .|+|+|+|..|+..|+-....
T Consensus 48 ~~~~~l~~~~~~----~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~------------------ 105 (236)
T 1zx0_A 48 PYMHALAAAASS----KGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR------------------ 105 (236)
T ss_dssp HHHHHHHHHHTT----TCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGG------------------
T ss_pred HHHHHHHhhcCC----CCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHh------------------
Confidence 355555554432 457999999999999999999887 899999999999776621110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE-ecccC----ChhhHHHHHHHHHHhccC
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-CFFID----TAHNIVEYIEIISRILKD 326 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT-~FFID----ta~Ni~~yl~~I~~~LKP 326 (412)
...++.++.+|+.++.. +...++||+|++ .|-+. ...+...+++.++++|||
T Consensus 106 ----------------------~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkp 162 (236)
T 1zx0_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------cCCCeEEEecCHHHhhc-ccCCCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCC
Confidence 01237889999988621 123589999998 44321 123455779999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEE
Q 015160 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEF 370 (412)
Q Consensus 327 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFei 370 (412)
||+++-+....+. ......-........++....+.++||+.
T Consensus 163 gG~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~aGF~~ 204 (236)
T 1zx0_A 163 GGVLTYCNLTSWG--ELMKSKYSDITIMFEETQVPALLEAGFRR 204 (236)
T ss_dssp EEEEEECCHHHHH--HHTTTTCSCHHHHHHHHTHHHHHHTTCCG
T ss_pred CeEEEEEecCcHH--HhhchhhhhhhhhccHHHHHHHHHCCCCC
Confidence 9999853221111 10000000011223355667788899984
No 74
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.50 E-value=1.6e-13 Score=120.09 Aligned_cols=154 Identities=18% Similarity=0.159 Sum_probs=102.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+++.+..|+|+|+|..|+..++..+...
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~~~~v~~~D~~~~~~~~a~~~~~~~---------------------------------- 78 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRH---------------------------------- 78 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999997766322100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
....++.+..+|+.+... ..+.||+|++...+ +++..+++.+.++|||||+++-..+.
T Consensus 79 ----~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~~~~---~~~~~~l~~~~~~l~~gG~l~~~~~~------------ 136 (192)
T 1l3i_A 79 ----GLGDNVTLMEGDAPEALC---KIPDIDIAVVGGSG---GELQEILRIIKDKLKPGGRIIVTAIL------------ 136 (192)
T ss_dssp ----TCCTTEEEEESCHHHHHT---TSCCEEEEEESCCT---TCHHHHHHHHHHTEEEEEEEEEEECB------------
T ss_pred ----CCCcceEEEecCHHHhcc---cCCCCCEEEECCch---HHHHHHHHHHHHhcCCCcEEEEEecC------------
Confidence 001237788899877322 12589999876544 35789999999999999999853221
Q ss_pred CcccCCCHHHHHHHHHhCCCEEEEEe-eccccCCCCcccccccccceEEEEEEEc
Q 015160 349 EMSIELSLEDVKRVALHYGFEFEKEK-TIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~GFeii~e~-~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
.-+.+++..++++.||++.... .....+.......+...+....++++|+
T Consensus 137 ----~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~k~ 187 (192)
T 1l3i_A 137 ----LETKFEAMECLRDLGFDVNITELNIARGRALDRGTMMVSRNPVALIYTGVS 187 (192)
T ss_dssp ----HHHHHHHHHHHHHTTCCCEEEEEEEEEEEEETTEEEEEECCCEEEEECCC-
T ss_pred ----cchHHHHHHHHHHCCCceEEEEEEcccCeEecCceeecCCCCEEEEEEecc
Confidence 1135788889999999665432 1111111111122333444455567775
No 75
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.50 E-value=7.8e-14 Score=128.47 Aligned_cols=117 Identities=13% Similarity=0.118 Sum_probs=91.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-. .
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~~v~~vD~s~~~~~~a~~~---------------------------------~---- 90 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAARWAAYDFSPELLKLARAN---------------------------------A---- 90 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHH---------------------------------C----
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCEEEEEECCHHHHHHHHHh---------------------------------C----
Confidence 457999999999999999999999999999999999765511 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCC-CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQ-VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~-~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
.++.+..+|+.+.. |.. .++||+|++. .+...+++.++++|||||+++..+
T Consensus 91 -------~~~~~~~~d~~~~~--~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~------------- 142 (226)
T 3m33_A 91 -------PHADVYEWNGKGEL--PAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG------------- 142 (226)
T ss_dssp -------TTSEEEECCSCSSC--CTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE-------------
T ss_pred -------CCceEEEcchhhcc--CCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC-------------
Confidence 12578889986532 233 5799999987 345678999999999999999211
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-.++.+++..++.+.||+++...
T Consensus 143 ----~~~~~~~~~~~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 143 ----PRLNVPEVPERLAAVGWDIVAED 165 (226)
T ss_dssp ----SSSCCTHHHHHHHHTTCEEEEEE
T ss_pred ----CcCCHHHHHHHHHHCCCeEEEEE
Confidence 13466789999999999988743
No 76
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.49 E-value=7.4e-13 Score=123.16 Aligned_cols=129 Identities=16% Similarity=0.107 Sum_probs=94.2
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||+ .|..|+|+|+|..|+..++...... +
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 118 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL--------------------------Q----- 118 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------C-----
Confidence 457999999999999999994 5789999999999998776332110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe-cCcchhhhhccC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYG 345 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~-GPLlyh~~~~~g 345 (412)
..++.++.+|+.++...+...++||+|++..+ .++..+++.++++|||||+++-. |+.
T Consensus 119 --------~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~----~~~~~~l~~~~~~LkpgG~l~~~~g~~--------- 177 (240)
T 1xdz_A 119 --------LENTTFCHDRAETFGQRKDVRESYDIVTARAV----ARLSVLSELCLPLVKKNGLFVALKAAS--------- 177 (240)
T ss_dssp --------CSSEEEEESCHHHHTTCTTTTTCEEEEEEECC----SCHHHHHHHHGGGEEEEEEEEEEECC----------
T ss_pred --------CCCEEEEeccHHHhcccccccCCccEEEEecc----CCHHHHHHHHHHhcCCCCEEEEEeCCC---------
Confidence 01378899998876421112478999998663 45789999999999999999852 221
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
..-..+++.+.+++.||+++....
T Consensus 178 ------~~~~~~~~~~~l~~~g~~~~~~~~ 201 (240)
T 1xdz_A 178 ------AEEELNAGKKAITTLGGELENIHS 201 (240)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred ------chHHHHHHHHHHHHcCCeEeEEEE
Confidence 011246778888999999987553
No 77
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.49 E-value=1.4e-13 Score=125.25 Aligned_cols=148 Identities=10% Similarity=0.036 Sum_probs=93.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHH-HHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMIC-SSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~-s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..||++ |..|+|+|+|..||.. ++...+....
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~----------------------------- 77 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAK----------------------------- 77 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGG-----------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhh-----------------------------
Confidence 5679999999999999999999 7899999999999863 3321110000
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc-C----ChhhHHHHHHHHHHhccCCcEEEE-ecCcchh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI-D----TAHNIVEYIEIISRILKDGGVWIN-LGPLLYH 339 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFI-D----ta~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh 339 (412)
....++.+..+|+.++.. ..+. |.|...+-. . ..++...+++.++++|||||+++- ++...|.
T Consensus 78 -------~~~~~v~~~~~d~~~l~~---~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 146 (218)
T 3mq2_A 78 -------GGLPNLLYLWATAERLPP---LSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR 146 (218)
T ss_dssp -------TCCTTEEEEECCSTTCCS---CCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT
T ss_pred -------cCCCceEEEecchhhCCC---CCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc
Confidence 001247899999988643 2445 777643311 0 112236899999999999999984 3332221
Q ss_pred hhh-ccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 340 FAD-LYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 340 ~~~-~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
... ..+..+........++++.++.++||+++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~i~~~~~~ 184 (218)
T 3mq2_A 147 PSVPEVGEHPEPTPDSADEWLAPRYAEAGWKLADCRYL 184 (218)
T ss_dssp TBCGGGTTCCCCCHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ccccccccCCccchHHHHHHHHHHHHHcCCCceeeecc
Confidence 110 1111111111223456888999999999886543
No 78
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.48 E-value=7.9e-13 Score=119.68 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 146 DKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 146 ~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
+..........+.|.... ...+++.|... .++.+|||+|||+|.++..|+ ..|+|+|+|...
T Consensus 37 ~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~------~~~~~vLDiG~G~G~~~~~l~---~~v~~~D~s~~~-- 98 (215)
T 2zfu_A 37 LLYHRGFQSQVKKWPLQP-------VDRIARDLRQR------PASLVVADFGCGDCRLASSIR---NPVHCFDLASLD-- 98 (215)
T ss_dssp HHHHHHHHHHHTTSSSCH-------HHHHHHHHHTS------CTTSCEEEETCTTCHHHHHCC---SCEEEEESSCSS--
T ss_pred HHHHHHHHhhhcccchhH-------HHHHHHHHhcc------CCCCeEEEECCcCCHHHHHhh---ccEEEEeCCCCC--
Confidence 333444444445565431 12355555532 145689999999999998884 789999999740
Q ss_pred HHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec
Q 015160 226 CSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF 305 (412)
Q Consensus 226 ~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F 305 (412)
+.+..+|+.++. ...++||+|++.+
T Consensus 99 ----------------------------------------------------~~~~~~d~~~~~---~~~~~fD~v~~~~ 123 (215)
T 2zfu_A 99 ----------------------------------------------------PRVTVCDMAQVP---LEDESVDVAVFCL 123 (215)
T ss_dssp ----------------------------------------------------TTEEESCTTSCS---CCTTCEEEEEEES
T ss_pred ----------------------------------------------------ceEEEeccccCC---CCCCCEeEEEEeh
Confidence 235667776643 2357899999887
Q ss_pred ccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 306 FIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 306 FIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+.. .+...+++.++++|||||++|-..+. .-..+.+++..++++.||+++...
T Consensus 124 ~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~--------------~~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 124 SLMG-TNIRDFLEEANRVLKPGGLLKVAEVS--------------SRFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp CCCS-SCHHHHHHHHHHHEEEEEEEEEEECG--------------GGCSCHHHHHHHHHHTTEEEEEEE
T ss_pred hccc-cCHHHHHHHHHHhCCCCeEEEEEEcC--------------CCCCCHHHHHHHHHHCCCEEEEEe
Confidence 7764 67899999999999999999853221 012389999999999999998754
No 79
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=122.34 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=87.1
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
+..+.+.|.++++ ++.+|||+|||+|+++..|+++|+ .|+|+|+|..|+..++-.+..
T Consensus 29 ~~~~~~~l~~~~~-----~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~---------------- 87 (215)
T 2pxx_A 29 FSSFRALLEPELR-----PEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH---------------- 87 (215)
T ss_dssp HHHHHHHHGGGCC-----TTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT----------------
T ss_pred HHHHHHHHHHhcC-----CCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc----------------
Confidence 4457777777653 557999999999999999999998 899999999999766521100
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC---------------ChhhHH
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---------------TAHNIV 314 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID---------------ta~Ni~ 314 (412)
..++.+..+|+.++. ...++||+|++...++ ...++.
T Consensus 88 -------------------------~~~i~~~~~d~~~~~---~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (215)
T 2pxx_A 88 -------------------------VPQLRWETMDVRKLD---FPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVD 139 (215)
T ss_dssp -------------------------CTTCEEEECCTTSCC---SCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHH
T ss_pred -------------------------CCCcEEEEcchhcCC---CCCCcccEEEECcchhhhccccccccccccchhHHHH
Confidence 013678889988763 2357899999865332 134678
Q ss_pred HHHHHHHHhccCCcEEEEe
Q 015160 315 EYIEIISRILKDGGVWINL 333 (412)
Q Consensus 315 ~yl~~I~~~LKPGG~wIN~ 333 (412)
++++.++++|||||++|-.
T Consensus 140 ~~l~~~~~~LkpgG~li~~ 158 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISM 158 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhCcCCCEEEEE
Confidence 9999999999999999864
No 80
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.48 E-value=2.5e-13 Score=120.21 Aligned_cols=103 Identities=16% Similarity=0.055 Sum_probs=77.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|+++..||++|..|+|+|+|..|+..|+..+... +
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~~~~v~~vD~s~~~l~~a~~~~~~~--------------------------~------- 68 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGLSKKVYAFDVQEQALGKTSQRLSDL--------------------------G------- 68 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999999999999999999998776332110 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC--------ChhhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FID--------ta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
. .++.+..+|+.++... ..++||+|+..+ |+. ...+....|+.++++|||||+++-
T Consensus 69 -----~-~~v~~~~~~~~~l~~~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 69 -----I-ENTELILDGHENLDHY--VREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp -----C-CCEEEEESCGGGGGGT--CCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -----C-CcEEEEeCcHHHHHhh--ccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 0 2367777787765321 257899998763 443 345567889999999999999985
No 81
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.48 E-value=3.3e-13 Score=129.09 Aligned_cols=191 Identities=15% Similarity=0.200 Sum_probs=113.1
Q ss_pred CcchHHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHH----HHHc--CCeE-
Q 015160 142 LADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALE----ISHL--GFIS- 214 (412)
Q Consensus 142 ~~d~~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~e----LA~~--Gf~V- 214 (412)
..|.+........+.+. +.. ...+...+...+..+...++. ..++.+|||+|||+|.++.. ++.+ +..|
T Consensus 9 ~~d~~~y~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~--~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~ 84 (292)
T 2aot_A 9 FSDHGKYVESFRRFLNH-STE-HQCMQEFMDKKLPGIIGRIGD--TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCIN 84 (292)
T ss_dssp GGCHHHHHHHHHHHHTT-BSH-HHHHHHHHHHTHHHHSSSTTT--TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEE
T ss_pred cccHHHHHHHHHHHHHh-ccH-HHHHHHHHHHhchhHHhhccC--CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceee
Confidence 46777877777777654 222 122332232222222222211 12567999999999976653 3443 3333
Q ss_pred -EEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC---
Q 015160 215 -QGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS--- 290 (412)
Q Consensus 215 -~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~--- 290 (412)
+|+|.|..||..++-.+.. .. .+..+ .+.+..++..++..
T Consensus 85 ~~~vD~S~~ml~~a~~~~~~---~~-------------------~~~~v--------------~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 85 NEVVEPSAEQIAKYKELVAK---TS-------------------NLENV--------------KFAWHKETSSEYQSRML 128 (292)
T ss_dssp EEEECSCHHHHHHHHHHHHT---CS-------------------SCTTE--------------EEEEECSCHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHh---cc-------------------CCCcc--------------eEEEEecchhhhhhhhc
Confidence 9999999999876622210 00 00000 14455666544320
Q ss_pred CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe--cC---c--chhhh-hccCCCCCcccCCCHHHHHHH
Q 015160 291 DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL--GP---L--LYHFA-DLYGQEDEMSIELSLEDVKRV 362 (412)
Q Consensus 291 ~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~--GP---L--lyh~~-~~~g~~~~~~ieLS~EEL~~l 362 (412)
.+...++||+|++.+-+...+|+...|+.++++|||||+++-. .+ . +|... ...+. +.....++.+++.++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 207 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRFPQ-DDLCQYITSDDLTQM 207 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGSCC-CTTCCCCCHHHHHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhccC-CCcccCCCHHHHHHH
Confidence 0112578999998887777778899999999999999999852 11 0 11110 10111 111234799999999
Q ss_pred HHhCCCEEEEE
Q 015160 363 ALHYGFEFEKE 373 (412)
Q Consensus 363 l~~~GFeii~e 373 (412)
++++||+++..
T Consensus 208 l~~aGf~~~~~ 218 (292)
T 2aot_A 208 LDNLGLKYECY 218 (292)
T ss_dssp HHHHTCCEEEE
T ss_pred HHHCCCceEEE
Confidence 99999998773
No 82
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.48 E-value=1.2e-12 Score=119.77 Aligned_cols=124 Identities=11% Similarity=-0.045 Sum_probs=93.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+|++|..|+|+|+|..|+..|+..+...
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 100 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIENIQKNIDTY---------------------------------- 100 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHc----------------------------------
Confidence 5679999999999999999999999999999999998776322100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
....++.++.+|+.+... ..+.||+|+...-+ +.. +++.++++|||||++|-..+.
T Consensus 101 ----g~~~~v~~~~~d~~~~~~---~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~------------ 156 (204)
T 3njr_A 101 ----GLSPRMRAVQGTAPAALA---DLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVT------------ 156 (204)
T ss_dssp ----TCTTTEEEEESCTTGGGT---TSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECS------------
T ss_pred ----CCCCCEEEEeCchhhhcc---cCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecC------------
Confidence 011247889999988432 13579999865422 455 999999999999999853221
Q ss_pred CcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.-+.+++.+++++.||++....
T Consensus 157 ----~~~~~~~~~~l~~~g~~i~~i~ 178 (204)
T 3njr_A 157 ----LESETLLTQLHARHGGQLLRID 178 (204)
T ss_dssp ----HHHHHHHHHHHHHHCSEEEEEE
T ss_pred ----cccHHHHHHHHHhCCCcEEEEE
Confidence 1245788888999999988754
No 83
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.47 E-value=7.4e-14 Score=130.64 Aligned_cols=153 Identities=16% Similarity=0.026 Sum_probs=98.9
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
|+.+.+.+..+ +++.+|||+|||+|..+..|++.+ -.|+|+|+|+.|+..|+-... .
T Consensus 48 ~~m~~~a~~~~----~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~---~--------------- 105 (236)
T 3orh_A 48 PYMHALAAAAS----SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAP---R--------------- 105 (236)
T ss_dssp HHHHHHHHHHT----TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGG---G---------------
T ss_pred HHHHHHHHhhc----cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHh---h---------------
Confidence 46666665543 257799999999999999999874 689999999999987762211 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE-----ecccCChhhHHHHHHHHHHhccC
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT-----CFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT-----~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
...++.++.+|..++.. +...++||+|+. .+-+....+...+++.++|+|||
T Consensus 106 ----------------------~~~~~~~~~~~a~~~~~-~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkP 162 (236)
T 3orh_A 106 ----------------------QTHKVIPLKGLWEDVAP-TLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKP 162 (236)
T ss_dssp ----------------------CSSEEEEEESCHHHHGG-GSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEE
T ss_pred ----------------------CCCceEEEeehHHhhcc-cccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCC
Confidence 01235678888766432 234678999862 12244556788999999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 327 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
||+|+-+....+. +......+ .......+.+...|.++||+++.
T Consensus 163 GG~l~f~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~L~eaGF~~~~ 206 (236)
T 3orh_A 163 GGVLTYCNLTSWG-ELMKSKYS-DITIMFEETQVPALLEAGFRREN 206 (236)
T ss_dssp EEEEEECCHHHHH-HHTTTTCS-CHHHHHHHHTHHHHHHHTCCGGG
T ss_pred CCEEEEEecCCch-hhhhhhhh-hhhhhhHHHHHHHHHHcCCeEEE
Confidence 9999854322111 10000000 01123455666677788998644
No 84
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.47 E-value=6e-13 Score=128.25 Aligned_cols=166 Identities=15% Similarity=0.089 Sum_probs=107.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
..+++.|....+ ++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++-........
T Consensus 22 ~~~~~~l~~~~~-----~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~------------- 83 (313)
T 3bgv_A 22 GEFLEKVRQKKK-----RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNR------------- 83 (313)
T ss_dssp HHHHHHHHHTC-------CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSS-------------
T ss_pred HHHHHHhhhccC-----CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhc-------------
Confidence 345555554432 4569999999999999999976 568999999999997766332110000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC---CCCCCCCccEEEEeccc----CChhhHHHHHHHHHHh
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS---DPSQVGAWDAVVTCFFI----DTAHNIVEYIEIISRI 323 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~---~~~~~~~fD~VvT~FFI----Dta~Ni~~yl~~I~~~ 323 (412)
... ....++.+..+|+.++.. .+...++||+|++.+.+ ...+++..+|+.++++
T Consensus 84 ---~~~----------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~ 144 (313)
T 3bgv_A 84 ---RDS----------------EYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACER 144 (313)
T ss_dssp ---SCC-----------------CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTT
T ss_pred ---ccc----------------cccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHH
Confidence 000 011247889999887531 11124589999998755 4446678999999999
Q ss_pred ccCCcEEEEecCcc-------------------hh--hhhc--c---CC---------CCCcccCCCHHHHHHHHHhCCC
Q 015160 324 LKDGGVWINLGPLL-------------------YH--FADL--Y---GQ---------EDEMSIELSLEDVKRVALHYGF 368 (412)
Q Consensus 324 LKPGG~wIN~GPLl-------------------yh--~~~~--~---g~---------~~~~~ieLS~EEL~~ll~~~GF 368 (412)
|||||++|-..|-. |. |.+. . +. .+...+.++.+++.+++++.||
T Consensus 145 LkpgG~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~ 224 (313)
T 3bgv_A 145 LSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNM 224 (313)
T ss_dssp EEEEEEEEEEEECHHHHHHHHTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTE
T ss_pred hCCCcEEEEecCChHHHHHHHHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCc
Confidence 99999998532210 00 1110 0 00 0001234789999999999999
Q ss_pred EEEEEe
Q 015160 369 EFEKEK 374 (412)
Q Consensus 369 eii~e~ 374 (412)
+++...
T Consensus 225 ~~v~~~ 230 (313)
T 3bgv_A 225 KLVYKK 230 (313)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999854
No 85
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.46 E-value=1.2e-12 Score=114.06 Aligned_cols=125 Identities=11% Similarity=-0.036 Sum_probs=91.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+...
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 72 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL-------------------------------- 72 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT--------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh--------------------------------
Confidence 5679999999999999999998 789999999999998776332100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~ 346 (412)
....++ ++.+|+.+... ...++||+|+..+.+.. ..+++.++++|||||+++-..+.
T Consensus 73 ------~~~~~~-~~~~d~~~~~~--~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~---------- 129 (178)
T 3hm2_A 73 ------GVSDRI-AVQQGAPRAFD--DVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVT---------- 129 (178)
T ss_dssp ------TCTTSE-EEECCTTGGGG--GCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECS----------
T ss_pred ------CCCCCE-EEecchHhhhh--ccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeec----------
Confidence 011236 67788766432 12278999998776654 57899999999999999853221
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.-+.+++..++++.|+++....
T Consensus 130 ------~~~~~~~~~~~~~~~~~~~~~~ 151 (178)
T 3hm2_A 130 ------VESEQMLWALRKQFGGTISSFA 151 (178)
T ss_dssp ------HHHHHHHHHHHHHHCCEEEEEE
T ss_pred ------cccHHHHHHHHHHcCCeeEEEE
Confidence 1234677888889999987743
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.45 E-value=7.5e-13 Score=126.56 Aligned_cols=155 Identities=11% Similarity=0.087 Sum_probs=105.2
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHH---HcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEIS---HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA---~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
..+.+.|.++.+. ++.+|||+|||+|+++..|+ ..+..|+|+|+|..|+..++-.+... .
T Consensus 23 ~~~~~~l~~~~~~----~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~----------- 85 (299)
T 3g5t_A 23 SDFYKMIDEYHDG----ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS--P----------- 85 (299)
T ss_dssp HHHHHHHHHHCCS----CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC--C-----------
T ss_pred HHHHHHHHHHhcC----CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc--c-----------
Confidence 4466777776542 56799999999999999999 56789999999999998776332110 0
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCC---CCCCCccEEEEecccCChhhHHHHHHHHHHhcc
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP---SQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 325 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~---~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LK 325 (412)
....++.+..+|+.++.... ...++||+|++...+... ++..+++.++++||
T Consensus 86 ------------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 86 ------------------------DTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLR 140 (299)
T ss_dssp -------------------------CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEE
T ss_pred ------------------------CCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcC
Confidence 00124788999988764310 012789999988766555 78999999999999
Q ss_pred CCcEEEEe---cCcchhhhhc--------cCCCCCc-ccC-CCHHHHHHHHHhCCC
Q 015160 326 DGGVWINL---GPLLYHFADL--------YGQEDEM-SIE-LSLEDVKRVALHYGF 368 (412)
Q Consensus 326 PGG~wIN~---GPLlyh~~~~--------~g~~~~~-~ie-LS~EEL~~ll~~~GF 368 (412)
|||+++-. .|....+... ++..... .+. ...+.++.+++.+||
T Consensus 141 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 141 KDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPYWEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp EEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGGSCTTHHHHHHTTTTTCCC
T ss_pred CCcEEEEEecCCccccCcHHHHHHHHHhccCcccccchhhchhhHHHHHhhhccCC
Confidence 99999741 1221110000 1110111 223 567788999999999
No 87
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.45 E-value=1.7e-12 Score=112.82 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=92.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+++.+..|+|+|+|..|+..++..+... .
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------- 81 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKF--------------------------N------- 81 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHTTSSEEEEEECSHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCCEEEEeCCCCCHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHc--------------------------C-------
Confidence 5679999999999999999998889999999999997766322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
..++.+..+|+.+... .++||+|++... .++.++++.++++ |||+++-..+.
T Consensus 82 ------~~~~~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~------------ 133 (183)
T 2yxd_A 82 ------IKNCQIIKGRAEDVLD----KLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIV------------ 133 (183)
T ss_dssp ------CCSEEEEESCHHHHGG----GCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESC------------
T ss_pred ------CCcEEEEECCcccccc----CCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecc------------
Confidence 0137788999887332 368999987765 5678899999998 99999853221
Q ss_pred CcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 349 EMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.-..+++.+++++.||++....
T Consensus 134 ----~~~~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 134 ----LENAAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp ----HHHHHHHHHHHHHTTCEEEEEE
T ss_pred ----cccHHHHHHHHHHcCCeEEEEE
Confidence 1135678899999999887643
No 88
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.45 E-value=9.2e-13 Score=124.67 Aligned_cols=133 Identities=20% Similarity=0.192 Sum_probs=100.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
.++.|.+.+. ++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..... +
T Consensus 110 ~~~~l~~~~~-----~~~~VLDiGcG~G~l~~~la~~g~~v~gvDi~~~~v~~a~~n~~~----~--------------- 165 (254)
T 2nxc_A 110 ALKALARHLR-----PGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKR----N--------------- 165 (254)
T ss_dssp HHHHHHHHCC-----TTCEEEEETCTTSHHHHHHHHTTCEEEEEESCGGGHHHHHHHHHH----T---------------
T ss_pred HHHHHHHhcC-----CCCEEEEecCCCcHHHHHHHHhCCeEEEEECCHHHHHHHHHHHHH----c---------------
Confidence 4556665543 457999999999999999999999999999999999777632210 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
.+ . +.+..+|+.+... .++||+|+++.. .+.+..+++.+.++|||||++|-.
T Consensus 166 -------~~-------------~-v~~~~~d~~~~~~----~~~fD~Vv~n~~---~~~~~~~l~~~~~~LkpgG~lils 217 (254)
T 2nxc_A 166 -------GV-------------R-PRFLEGSLEAALP----FGPFDLLVANLY---AELHAALAPRYREALVPGGRALLT 217 (254)
T ss_dssp -------TC-------------C-CEEEESCHHHHGG----GCCEEEEEEECC---HHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -------CC-------------c-EEEEECChhhcCc----CCCCCEEEECCc---HHHHHHHHHHHHHHcCCCCEEEEE
Confidence 00 1 4678888877432 468999998654 334678999999999999999964
Q ss_pred cCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 334 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 334 GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|.+ .-..+++++++++.||++++..
T Consensus 218 ~~~----------------~~~~~~v~~~l~~~Gf~~~~~~ 242 (254)
T 2nxc_A 218 GIL----------------KDRAPLVREAMAGAGFRPLEEA 242 (254)
T ss_dssp EEE----------------GGGHHHHHHHHHHTTCEEEEEE
T ss_pred eec----------------cCCHHHHHHHHHHCCCEEEEEe
Confidence 432 1247899999999999998754
No 89
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.44 E-value=1.7e-12 Score=118.59 Aligned_cols=129 Identities=16% Similarity=0.147 Sum_probs=93.7
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+||| +|.++..+|++ +..|+|+|+|..|+..++..+... +
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~----- 103 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERN--------------------------N----- 103 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHT--------------------------T-----
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHh--------------------------C-----
Confidence 56799999999 99999999999 899999999999998776332110 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC------------------ChhhHHHHHHHHHHhccCC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID------------------TAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FID------------------ta~Ni~~yl~~I~~~LKPG 327 (412)
.++.+..+|+..+... ..++||+|++.. |.. ....+.++++.+.++||||
T Consensus 104 ---------~~v~~~~~d~~~~~~~--~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 172 (230)
T 3evz_A 104 ---------SNVRLVKSNGGIIKGV--VEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG 172 (230)
T ss_dssp ---------CCCEEEECSSCSSTTT--CCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE
T ss_pred ---------CCcEEEeCCchhhhhc--ccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC
Confidence 0267888996544322 247899999762 221 1122478999999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 328 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|+++-.-|-. .-..+++.+++++.||++....
T Consensus 173 G~l~~~~~~~---------------~~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 173 GKVALYLPDK---------------EKLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp EEEEEEEESC---------------HHHHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEEeccc---------------HhHHHHHHHHHHHcCCceEEEE
Confidence 9998532211 1235789999999999887654
No 90
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.44 E-value=1.9e-12 Score=121.16 Aligned_cols=149 Identities=9% Similarity=0.026 Sum_probs=99.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHH------HHHHHHhhhhcccccccccccccccccCCCCCcccCc
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYY------MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 259 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~------ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~ql 259 (412)
++.+|||+|||+|.++..++++ | ..|+|+|+|.. |+..++..+...
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~------------------------- 97 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG------------------------- 97 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-------------------------
Confidence 5679999999999999999998 4 79999999997 887665222100
Q ss_pred cccccCCCCCCCCCCCCceeEEecc-cccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec--C-
Q 015160 260 RPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG--P- 335 (412)
Q Consensus 260 r~v~iPDv~p~~~~~~~~~s~~~GD-F~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~G--P- 335 (412)
....++.+..+| +.... .|...++||+|++...+....+...+++.+.++|+|||+++-.. +
T Consensus 98 -------------~~~~~v~~~~~d~~~~~~-~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 98 -------------PLGDRLTVHFNTNLSDDL-GPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp -------------TTGGGEEEECSCCTTTCC-GGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred -------------CCCCceEEEECChhhhcc-CCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 011247788887 43321 12235789999988655555555667888888888899998521 1
Q ss_pred ----cch-h---------hhhc-cCCCCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 336 ----LLY-H---------FADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 336 ----Lly-h---------~~~~-~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
..+ + +... ..........++.++++++++++||++++...+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 164 PTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp CSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred CCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 000 0 0000 011111123579999999999999999986644
No 91
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.44 E-value=1.7e-12 Score=125.31 Aligned_cols=142 Identities=14% Similarity=0.139 Sum_probs=100.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|+++ +..++|+|+| .|+..++-.+...
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-------------------------------- 211 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-------------------------------- 211 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc--------------------------------
Confidence 5679999999999999999998 7899999999 9997666322100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh----- 339 (412)
...+++.+..+|+.+... .+.||+|+....+... ++..+.++.++++|||||+++-..+..-.
T Consensus 212 ------~~~~~v~~~~~d~~~~~~----~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 281 (335)
T 2r3s_A 212 ------GVASRYHTIAGSAFEVDY----GNDYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITP 281 (335)
T ss_dssp ------TCGGGEEEEESCTTTSCC----CSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCS
T ss_pred ------CCCcceEEEecccccCCC----CCCCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCc
Confidence 011247899999987522 2349999987655433 56789999999999999987743222110
Q ss_pred -hh---hc--cCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 340 -FA---DL--YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 340 -~~---~~--~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+. +. .... ......+.+|++++++++||++++..
T Consensus 282 ~~~~~~~~~~~~~~-~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 282 PDAAAFSLVMLATT-PNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp HHHHHHHHHHHHHS-SSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred hHHHHHHHHHHeeC-CCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 00 00 0000 01346899999999999999998765
No 92
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.44 E-value=6.3e-12 Score=116.01 Aligned_cols=131 Identities=14% Similarity=0.010 Sum_probs=85.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+.... +.+.+.
T Consensus 57 ~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~---~~a~~~----------------------------- 104 (210)
T 1nt2_A 57 GDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLL---ELVRER----------------------------- 104 (210)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHH---HHHHHC-----------------------------
T ss_pred CCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHH---HHHhcC-----------------------------
Confidence 56799999999999999999874 68999999999873222 111110
Q ss_pred CCCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
.++.++.+|+.+... .+. .++||+|++.. .+ ......+++.++++|||||+++-. +.-...
T Consensus 105 ---------~~v~~~~~d~~~~~~~~~~-~~~fD~V~~~~-~~-~~~~~~~l~~~~r~LkpgG~l~i~----~~~~~~-- 166 (210)
T 1nt2_A 105 ---------NNIIPLLFDASKPWKYSGI-VEKVDLIYQDI-AQ-KNQIEILKANAEFFLKEKGEVVIM----VKARSI-- 166 (210)
T ss_dssp ---------SSEEEECSCTTCGGGTTTT-CCCEEEEEECC-CS-TTHHHHHHHHHHHHEEEEEEEEEE----EEHHHH--
T ss_pred ---------CCeEEEEcCCCCchhhccc-ccceeEEEEec-cC-hhHHHHHHHHHHHHhCCCCEEEEE----EecCCc--
Confidence 124556677765311 111 37899998763 22 233445699999999999999853 111110
Q ss_pred CCCCcccCCCHHHHH--H--HHHhCCCEEEEEee
Q 015160 346 QEDEMSIELSLEDVK--R--VALHYGFEFEKEKT 375 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~--~--ll~~~GFeii~e~~ 375 (412)
....+.+++. . .+++. |++++...
T Consensus 167 -----~~~~~~~~~~~~~~~~l~~~-f~~~~~~~ 194 (210)
T 1nt2_A 167 -----DSTAEPEEVFKSVLKEMEGD-FKIVKHGS 194 (210)
T ss_dssp -----CTTSCHHHHHHHHHHHHHTT-SEEEEEEE
T ss_pred -----cccCCHHHHHHHHHHHHHhh-cEEeeeec
Confidence 1234556653 2 26777 99988664
No 93
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.43 E-value=1.4e-13 Score=128.55 Aligned_cols=171 Identities=11% Similarity=0.046 Sum_probs=96.6
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCC-HHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFS-YYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S-~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..||+ .|..|+|+|+| ..||..|.+...++.+. +
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~-----------------------~---- 76 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG-----------------------G---- 76 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT-----------------------C----
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc-----------------------C----
Confidence 556999999999999999994 47789999999 88876653221111000 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-----hhhHHHHHHHHHHhccCCcEEEEecCcchhh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHNIVEYIEIISRILKDGGVWINLGPLLYHF 340 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt-----a~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~ 340 (412)
..++.+..+|+.++.. ...+.+|+|...|.... ..+..++|+.++++|||||+++-.-.+--++
T Consensus 77 ---------~~~v~~~~~d~~~l~~--~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~ 145 (225)
T 3p2e_A 77 ---------LSNVVFVIAAAESLPF--ELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSY 145 (225)
T ss_dssp ---------CSSEEEECCBTTBCCG--GGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--
T ss_pred ---------CCCeEEEEcCHHHhhh--hccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 1237889999887621 11244555544442111 1112468999999999999997511111111
Q ss_pred hhc---cCCCCCccc-CCCHHHHHHHHHhCCCEEEEEeeccccCCCC----cccccccccceEEE
Q 015160 341 ADL---YGQEDEMSI-ELSLEDVKRVALHYGFEFEKEKTIETTYTTN----PRSMMQNRYFTAFW 397 (412)
Q Consensus 341 ~~~---~g~~~~~~i-eLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d----~~sm~~~~Y~~~f~ 397 (412)
... .+..+...- .+..+|+.+++.++||+++........|... -.......|...|+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~ 210 (225)
T 3p2e_A 146 EEAEIKKRGLPLLSKAYFLSEQYKAELSNSGFRIDDVKELDNEYVKQFNSLWAKRLAFGRKRSFF 210 (225)
T ss_dssp ------------CCHHHHHSHHHHHHHHHHTCEEEEEEEECHHHHTTCCSHHHHHHHHSSCCCEE
T ss_pred hhchhhhcCCCCCChhhcchHHHHHHHHHcCCCeeeeeecCHHHHHHHHHHHhcccCccchhHHH
Confidence 110 011110000 1122459999999999998866444444321 12223345555554
No 94
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.43 E-value=3.3e-12 Score=121.15 Aligned_cols=173 Identities=13% Similarity=0.116 Sum_probs=109.6
Q ss_pred chHHHHHHHHHHHhcCcccC----hhHHhhch-HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEE
Q 015160 144 DVDKVRCIIRNIVRDWAAEG----KTERDQCY-KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQG 216 (412)
Q Consensus 144 d~~kv~s~L~q~~RDWS~eG----~~ER~~~y-~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~G 216 (412)
..+++. .+.++...|...- -.+.+..| ..+++.+.-..+ ....++.+|||+|||+|.++..||.. +..|+|
T Consensus 32 ~~~~~~-~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~-~~~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~ 109 (249)
T 3g89_A 32 HLEAFS-RLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRL-PLWQGPLRVLDLGTGAGFPGLPLKIVRPELELVL 109 (249)
T ss_dssp GHHHHH-HHHHHHHHC----------CHHHHHHHHHHHHHGGGGS-SCCCSSCEEEEETCTTTTTHHHHHHHCTTCEEEE
T ss_pred HHHHHH-HHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcc-cccCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEE
Confidence 344443 5666677786521 11112222 234444433222 11125679999999999999999987 679999
Q ss_pred EeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCC
Q 015160 217 NEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVG 296 (412)
Q Consensus 217 nD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~ 296 (412)
+|+|..|+..++...... + ..++.++.+|+.++...+...+
T Consensus 110 vD~s~~~~~~a~~~~~~~--------------------------~-------------l~~v~~~~~d~~~~~~~~~~~~ 150 (249)
T 3g89_A 110 VDATRKKVAFVERAIEVL--------------------------G-------------LKGARALWGRAEVLAREAGHRE 150 (249)
T ss_dssp EESCHHHHHHHHHHHHHH--------------------------T-------------CSSEEEEECCHHHHTTSTTTTT
T ss_pred EECCHHHHHHHHHHHHHh--------------------------C-------------CCceEEEECcHHHhhcccccCC
Confidence 999999998777432110 0 0137889999887643111247
Q ss_pred CccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 297 AWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 297 ~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
+||+|++..+ .++..+++.+.++|||||+++- .|+. ..-..+++...+++.||++++...
T Consensus 151 ~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~g~~---------------~~~e~~~~~~~l~~~G~~~~~~~~ 211 (249)
T 3g89_A 151 AYARAVARAV----APLCVLSELLLPFLEVGGAAVAMKGPR---------------VEEELAPLPPALERLGGRLGEVLA 211 (249)
T ss_dssp CEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEECSC---------------CHHHHTTHHHHHHHHTEEEEEEEE
T ss_pred CceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEeCCC---------------cHHHHHHHHHHHHHcCCeEEEEEE
Confidence 8999998654 3467899999999999999985 2321 011234567778889999988654
Q ss_pred c
Q 015160 376 I 376 (412)
Q Consensus 376 i 376 (412)
.
T Consensus 212 ~ 212 (249)
T 3g89_A 212 L 212 (249)
T ss_dssp E
T ss_pred e
Confidence 3
No 95
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.43 E-value=6.5e-12 Score=116.05 Aligned_cols=135 Identities=16% Similarity=0.079 Sum_probs=90.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..++-... .
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~---~------------------------------ 120 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACA---E------------------------------ 120 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTT---T------------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhh---c------------------------------
Confidence 5679999999999999999998 5 689999999999976552110 0
Q ss_pred CCCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.+... .+.. ++||+|+.. +........+++.+.++|||||+++-. +.......
T Consensus 121 --------~~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~----~~~~~~~~ 185 (230)
T 1fbn_A 121 --------RENIIPILGDANKPQEYANIV-EKVDVIYED--VAQPNQAEILIKNAKWFLKKGGYGMIA----IKARSIDV 185 (230)
T ss_dssp --------CTTEEEEECCTTCGGGGTTTS-CCEEEEEEC--CCSTTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCS
T ss_pred --------CCCeEEEECCCCCcccccccC-ccEEEEEEe--cCChhHHHHHHHHHHHhCCCCcEEEEE----EecCCCCC
Confidence 0236778888876211 1122 689999822 222223467899999999999999853 11111100
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
..+ ...+..+++. ++++.||++++..
T Consensus 186 ~~~--~~~~~~~~l~-~l~~~Gf~~~~~~ 211 (230)
T 1fbn_A 186 TKD--PKEIFKEQKE-ILEAGGFKIVDEV 211 (230)
T ss_dssp SSC--HHHHHHHHHH-HHHHHTEEEEEEE
T ss_pred CCC--HHHhhHHHHH-HHHHCCCEEEEEE
Confidence 111 1134558888 8889999988754
No 96
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.42 E-value=1e-12 Score=131.69 Aligned_cols=113 Identities=16% Similarity=0.126 Sum_probs=86.4
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
.+.+.|.+.... .++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..++-.+...
T Consensus 50 ~~~~~i~~~~~~---~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~----------------- 108 (376)
T 3r0q_C 50 AYFNAVFQNKHH---FEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKAN----------------- 108 (376)
T ss_dssp HHHHHHHTTTTT---TTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHT-----------------
T ss_pred HHHHHHHhcccc---CCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHc-----------------
Confidence 344555444322 2567999999999999999999999 89999999 9997776433210
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCc
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
...+++.++.+|+.++.. .++||+|++. +|+.....+..+++.++++|||||
T Consensus 109 ---------------------~~~~~v~~~~~d~~~~~~----~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG 163 (376)
T 3r0q_C 109 ---------------------NLDHIVEVIEGSVEDISL----PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTG 163 (376)
T ss_dssp ---------------------TCTTTEEEEESCGGGCCC----SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEE
T ss_pred ---------------------CCCCeEEEEECchhhcCc----CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCe
Confidence 011237899999988643 2789999984 467666778889999999999999
Q ss_pred EEE
Q 015160 329 VWI 331 (412)
Q Consensus 329 ~wI 331 (412)
++|
T Consensus 164 ~li 166 (376)
T 3r0q_C 164 VMY 166 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 97
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.41 E-value=4.7e-12 Score=113.69 Aligned_cols=118 Identities=12% Similarity=0.107 Sum_probs=88.6
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
+.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+... .
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~------ 113 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL--------------------------K------ 113 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT--------------------------T------
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------C------
Confidence 569999999999999999987 789999999999997776332110 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe-cCcchhhhhccCC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL-GPLLYHFADLYGQ 346 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~-GPLlyh~~~~~g~ 346 (412)
..++.+..+|+.++.. .++||+|++..+ .++..+++.+.++|||||+++-. |+
T Consensus 114 -------~~~v~~~~~d~~~~~~----~~~~D~i~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~----------- 167 (207)
T 1jsx_A 114 -------LENIEPVQSRVEEFPS----EPPFDGVISRAF----ASLNDMVSWCHHLPGEQGRFYALKGQ----------- 167 (207)
T ss_dssp -------CSSEEEEECCTTTSCC----CSCEEEEECSCS----SSHHHHHHHHTTSEEEEEEEEEEESS-----------
T ss_pred -------CCCeEEEecchhhCCc----cCCcCEEEEecc----CCHHHHHHHHHHhcCCCcEEEEEeCC-----------
Confidence 0126788999887542 478999986433 45779999999999999999852 21
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
...+++..++. ||++++..
T Consensus 168 -------~~~~~~~~~~~--g~~~~~~~ 186 (207)
T 1jsx_A 168 -------MPEDEIALLPE--EYQVESVV 186 (207)
T ss_dssp -------CCHHHHHTSCT--TEEEEEEE
T ss_pred -------CchHHHHHHhc--CCceeeee
Confidence 24567777664 99988744
No 98
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.41 E-value=2.8e-12 Score=113.78 Aligned_cols=116 Identities=13% Similarity=0.051 Sum_probs=88.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++| .|+|+|+|..|+.. .
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~~-~v~gvD~s~~~~~~----------~------------------------------- 60 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKRN-TVVSTDLNIRALES----------H------------------------------- 60 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTTS-EEEEEESCHHHHHT----------C-------------------------------
T ss_pred CCCeEEEeccCccHHHHHHHhcC-cEEEEECCHHHHhc----------c-------------------------------
Confidence 45699999999999999999999 99999999999741 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccC--------ChhhHHHHHHHHHHhccCCcEEEEecCcchh
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FID--------TAHNIVEYIEIISRILKDGGVWINLGPLLYH 339 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FID--------ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh 339 (412)
.++.+..+|+.+... .++||+|+++. |.. ...+..+.++.+.+.| |||+++-..+
T Consensus 61 -------~~~~~~~~d~~~~~~----~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~---- 124 (170)
T 3q87_B 61 -------RGGNLVRADLLCSIN----QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVI---- 124 (170)
T ss_dssp -------SSSCEEECSTTTTBC----GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEE----
T ss_pred -------cCCeEEECChhhhcc----cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEe----
Confidence 125678899887432 47999999874 332 1223457889999999 9999975221
Q ss_pred hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 340 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 340 ~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-.-..+++++++++.||+.+...
T Consensus 125 ------------~~~~~~~l~~~l~~~gf~~~~~~ 147 (170)
T 3q87_B 125 ------------EANRPKEVLARLEERGYGTRILK 147 (170)
T ss_dssp ------------GGGCHHHHHHHHHHTTCEEEEEE
T ss_pred ------------cCCCHHHHHHHHHHCCCcEEEEE
Confidence 01357899999999999987744
No 99
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.41 E-value=7.8e-12 Score=117.72 Aligned_cols=132 Identities=14% Similarity=0.119 Sum_probs=96.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..||+++. .|+|+|+|..|+..|+..+.. +
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~----~----------------------------- 95 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAY----N----------------------------- 95 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHH----C-----------------------------
Confidence 356999999999999999999987 899999999999777632211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC------------------ChhhHHHHHHHHHHhccCC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID------------------TAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID------------------ta~Ni~~yl~~I~~~LKPG 327 (412)
...+++.++.+|+.++.. ....++||+|++. ||.. ...++.++++.+.++||||
T Consensus 96 -----~~~~~v~~~~~D~~~~~~-~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg 169 (259)
T 3lpm_A 96 -----QLEDQIEIIEYDLKKITD-LIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG 169 (259)
T ss_dssp -----TCTTTEEEECSCGGGGGG-TSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE
T ss_pred -----CCcccEEEEECcHHHhhh-hhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC
Confidence 111347889999988642 1225789999986 3322 0134668999999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeec
Q 015160 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTI 376 (412)
Q Consensus 328 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i 376 (412)
|+++-+.| .-..+++..++.+.||.......+
T Consensus 170 G~l~~~~~-----------------~~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 170 GKANFVHR-----------------PERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp EEEEEEEC-----------------TTTHHHHHHHHHHTTEEEEEEEEE
T ss_pred cEEEEEEc-----------------HHHHHHHHHHHHHCCCceEEEEEe
Confidence 99985211 124678899999999998876543
No 100
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.41 E-value=8.6e-12 Score=114.21 Aligned_cols=136 Identities=18% Similarity=0.101 Sum_probs=90.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..||++ | ..|+|+|+|..|+..+.-... .
T Consensus 73 ~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~---~----------------------------- 120 (227)
T 1g8a_A 73 PGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVE---E----------------------------- 120 (227)
T ss_dssp TTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHS---S-----------------------------
T ss_pred CCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHh---c-----------------------------
Confidence 5679999999999999999987 3 689999999999865442110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.+........++||+|++... .......+++.++++|||||+++-. +.......
T Consensus 121 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~--~~~~~~~~l~~~~~~LkpgG~l~~~----~~~~~~~~ 185 (227)
T 1g8a_A 121 ---------RRNIVPILGDATKPEEYRALVPKVDVIFEDVA--QPTQAKILIDNAEVYLKRGGYGMIA----VKSRSIDV 185 (227)
T ss_dssp ---------CTTEEEEECCTTCGGGGTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE----EEGGGTCT
T ss_pred ---------cCCCEEEEccCCCcchhhcccCCceEEEECCC--CHhHHHHHHHHHHHhcCCCCEEEEE----EecCCCCC
Confidence 01367888998773210112358999996543 2222345599999999999999853 21111100
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
..+ ...+..+++..+ .+. |++++...
T Consensus 186 ~~~--~~~~~~~~l~~l-~~~-f~~~~~~~ 211 (227)
T 1g8a_A 186 TKE--PEQVFREVEREL-SEY-FEVIERLN 211 (227)
T ss_dssp TSC--HHHHHHHHHHHH-HTT-SEEEEEEE
T ss_pred CCC--hhhhhHHHHHHH-Hhh-ceeeeEec
Confidence 111 124667888888 677 99987654
No 101
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.40 E-value=1.7e-12 Score=123.50 Aligned_cols=123 Identities=16% Similarity=0.033 Sum_probs=91.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+... .
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------~--- 159 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF---------------------------Y--- 159 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT---------------------------S---
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc---------------------------C---
Confidence 5679999999999999999998 789999999999997666322100 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
...++.+..+|+.+... .++||+|++ + .++..++++.+.++|||||+++-..|..
T Consensus 160 --------g~~~v~~~~~d~~~~~~----~~~fD~Vi~----~-~~~~~~~l~~~~~~LkpgG~l~i~~~~~-------- 214 (275)
T 1yb2_A 160 --------DIGNVRTSRSDIADFIS----DQMYDAVIA----D-IPDPWNHVQKIASMMKPGSVATFYLPNF-------- 214 (275)
T ss_dssp --------CCTTEEEECSCTTTCCC----SCCEEEEEE----C-CSCGGGSHHHHHHTEEEEEEEEEEESSH--------
T ss_pred --------CCCcEEEEECchhccCc----CCCccEEEE----c-CcCHHHHHHHHHHHcCCCCEEEEEeCCH--------
Confidence 01237788999887322 478999987 2 2345688999999999999998644321
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-..+++.+.+++.||+.++..
T Consensus 215 --------~~~~~~~~~l~~~Gf~~~~~~ 235 (275)
T 1yb2_A 215 --------DQSEKTVLSLSASGMHHLETV 235 (275)
T ss_dssp --------HHHHHHHHHSGGGTEEEEEEE
T ss_pred --------HHHHHHHHHHHHCCCeEEEEE
Confidence 134677888888999988743
No 102
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=4.7e-12 Score=121.64 Aligned_cols=135 Identities=11% Similarity=0.049 Sum_probs=92.5
Q ss_pred CCeEEEecCCC---ChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCcccccc
Q 015160 190 PPACLVPGAGL---GRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 264 (412)
Q Consensus 190 ~~rVLvPGCGl---GRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~i 264 (412)
..+|||+|||+ |.++..+++. |..|+|+|+|+.||..|+-.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------------------------------- 126 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------------------------------- 126 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------------------------------
Confidence 46899999999 9987766654 78999999999999877633210
Q ss_pred CCCCCCCCCCCCceeEEecccccccC---CC-----CCCCCccEEEEecc---cCChhhHHHHHHHHHHhccCCcEEEE-
Q 015160 265 PDIHPASAGITEGFSMCGGDFVEVYS---DP-----SQVGAWDAVVTCFF---IDTAHNIVEYIEIISRILKDGGVWIN- 332 (412)
Q Consensus 265 PDv~p~~~~~~~~~s~~~GDF~ely~---~~-----~~~~~fD~VvT~FF---IDta~Ni~~yl~~I~~~LKPGG~wIN- 332 (412)
..++.++.+|+.+... .+ ...++||+|+..+. +... ++...|++++++|||||+++-
T Consensus 127 ----------~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 127 ----------DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp ----------CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEE
T ss_pred ----------CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEE
Confidence 1237889999976310 00 01248999987753 4433 488999999999999999984
Q ss_pred -ecCc---ch----h-hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 333 -LGPL---LY----H-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 333 -~GPL---ly----h-~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
+.+- .+ . |.. .+ .+ ....+.+|+.+++ .||++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~-~~-~~--~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 196 SLVDTGLPAQQKLARITRE-NL-GE--GWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp EEBCSSCHHHHHHHHHHHH-HH-SC--CCCBCHHHHHHTT--TTCEECT
T ss_pred EecCcchHHHHHHHHHHHh-cC-CC--CccCCHHHHHHHh--CCCeEcc
Confidence 2220 00 0 111 01 11 2347999999999 5999887
No 103
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.40 E-value=7.7e-12 Score=122.22 Aligned_cols=143 Identities=12% Similarity=0.057 Sum_probs=99.7
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
..+|||+|||+|.++..|+++ +..++++|+ ..|+..++..+...
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--------------------------------- 225 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--------------------------------- 225 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT---------------------------------
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc---------------------------------
Confidence 679999999999999999998 678999999 77887666322100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcc--------
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLL-------- 337 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLl-------- 337 (412)
...+++.+..+||.+... ...+.||+|+....+. ..++....|+.++++|||||++|-..+.+
T Consensus 226 -----~~~~~v~~~~~d~~~~~~--~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~ 298 (352)
T 3mcz_A 226 -----DLGGRVEFFEKNLLDARN--FEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPA 298 (352)
T ss_dssp -----TCGGGEEEEECCTTCGGG--GTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSH
T ss_pred -----CCCCceEEEeCCcccCcc--cCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCc
Confidence 112348899999987531 0135699999877654 33457899999999999999998532211
Q ss_pred -hhhhhc-cCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 338 -YHFADL-YGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 338 -yh~~~~-~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
-.+.+. .........+.+.+|++++++++||++++.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~ 336 (352)
T 3mcz_A 299 LSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGER 336 (352)
T ss_dssp HHHHHHHHHHHHSTTCCCCCHHHHHHHHHHTTCEEEEE
T ss_pred hHHHhhHHHHhhCCCCCcCCHHHHHHHHHHCCCceeee
Confidence 000000 000000134689999999999999999874
No 104
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=9.8e-12 Score=122.36 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=103.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
..+.+.+.++. .+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 178 ~~~~l~~~~~~---~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~----------------- 236 (359)
T 1x19_A 178 AIQLLLEEAKL---DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK----------------- 236 (359)
T ss_dssp HHHHHHHHCCC---TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-----------------
T ss_pred hHHHHHHhcCC---CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc-----------------
Confidence 34455555542 25679999999999999999998 679999999 99997666322100
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh--hHHHHHHHHHHhccCCcE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH--NIVEYIEIISRILKDGGV 329 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~--Ni~~yl~~I~~~LKPGG~ 329 (412)
...+++.+..+|+.+... ..+|+|+..+.+.... +..+.|+.++++|||||+
T Consensus 237 ---------------------~~~~~v~~~~~d~~~~~~-----~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~ 290 (359)
T 1x19_A 237 ---------------------GVADRMRGIAVDIYKESY-----PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGR 290 (359)
T ss_dssp ---------------------TCTTTEEEEECCTTTSCC-----CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCE
T ss_pred ---------------------CCCCCEEEEeCccccCCC-----CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCCE
Confidence 011247899999987522 2249999887664333 378999999999999999
Q ss_pred EEEecCcc-------hh-hhhc---cCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 330 WINLGPLL-------YH-FADL---YGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 330 wIN~GPLl-------yh-~~~~---~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
+|-..+.. +. +... .+.........+.+|++++++++||++++...
T Consensus 291 l~i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 291 LLILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp EEEEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred EEEEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 96432111 00 0000 01000001128999999999999999987653
No 105
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.39 E-value=1.8e-12 Score=128.20 Aligned_cols=101 Identities=18% Similarity=0.220 Sum_probs=79.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..|+-.+.. +
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~----~----------------------------- 109 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRL----N----------------------------- 109 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHH----c-----------------------------
Confidence 456999999999999999999997 899999996 98766633211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
....++.++.+|+.++.. ..++||+|++.. ++....++..+++.+.++|||||++|
T Consensus 110 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 110 -----KLEDTITLIKGKIEEVHL---PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEEeeHHHhcC---CCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 011247889999988643 247899999754 67767778899999999999999998
No 106
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.39 E-value=2.3e-12 Score=119.77 Aligned_cols=138 Identities=14% Similarity=0.073 Sum_probs=100.2
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i 246 (412)
.|+..+..+...+... ++.+|||+|||+|.++..|++. +..|+|+|+|..|+..|+..+...
T Consensus 77 ~~~~~~~~i~~~~~~~---~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------ 141 (255)
T 3mb5_A 77 VHPKDAALIVAYAGIS---PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA------------ 141 (255)
T ss_dssp CCHHHHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH------------
T ss_pred ccHhHHHHHHHhhCCC---CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc------------
Confidence 3455555666555422 5679999999999999999999 789999999999998776332110
Q ss_pred cccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 015160 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 247 ~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
...+++.+..+|+.+... .++||+|+.. .++..++++.+.++|||
T Consensus 142 --------------------------~~~~~v~~~~~d~~~~~~----~~~~D~v~~~-----~~~~~~~l~~~~~~L~~ 186 (255)
T 3mb5_A 142 --------------------------GFDDRVTIKLKDIYEGIE----EENVDHVILD-----LPQPERVVEHAAKALKP 186 (255)
T ss_dssp --------------------------TCTTTEEEECSCGGGCCC----CCSEEEEEEC-----SSCGGGGHHHHHHHEEE
T ss_pred --------------------------CCCCceEEEECchhhccC----CCCcCEEEEC-----CCCHHHHHHHHHHHcCC
Confidence 011237889999987532 4789999862 23456789999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCC--CEEEEE
Q 015160 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG--FEFEKE 373 (412)
Q Consensus 327 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~G--Feii~e 373 (412)
||+++-+.|.. -..+++...+++.| |..++.
T Consensus 187 gG~l~~~~~~~----------------~~~~~~~~~l~~~g~~f~~~~~ 219 (255)
T 3mb5_A 187 GGFFVAYTPCS----------------NQVMRLHEKLREFKDYFMKPRT 219 (255)
T ss_dssp EEEEEEEESSH----------------HHHHHHHHHHHHTGGGBSCCEE
T ss_pred CCEEEEEECCH----------------HHHHHHHHHHHHcCCCccccEE
Confidence 99998654321 13567788899999 977663
No 107
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.39 E-value=4.8e-12 Score=110.77 Aligned_cols=116 Identities=13% Similarity=0.061 Sum_probs=84.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
..+.|.+.++.. ++.+|||+|||+|+++..++++|..|+|+|+|..|+..++..+...
T Consensus 40 ~~~~l~~~~~~~---~~~~vLdiG~G~G~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------------- 97 (194)
T 1dus_A 40 GTKILVENVVVD---KDDDILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLN------------------- 97 (194)
T ss_dssp HHHHHHHHCCCC---TTCEEEEETCTTSHHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHT-------------------
T ss_pred HHHHHHHHcccC---CCCeEEEeCCCCCHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHHc-------------------
Confidence 444444444322 5679999999999999999999999999999999997766332110
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-hhhHHHHHHHHHHhccCCcEEEE
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-AHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt-a~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
. ++ ..++.+..+|+.+... .++||+|++..-+.. ..++..+++.++++|||||+++-
T Consensus 98 -------~--~~---------~~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 98 -------N--LD---------NYDIRVVHSDLYENVK----DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp -------T--CT---------TSCEEEEECSTTTTCT----TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------C--CC---------ccceEEEECchhcccc----cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEE
Confidence 0 00 0026788899887432 478999998654333 56678999999999999999985
Q ss_pred e
Q 015160 333 L 333 (412)
Q Consensus 333 ~ 333 (412)
.
T Consensus 156 ~ 156 (194)
T 1dus_A 156 V 156 (194)
T ss_dssp E
T ss_pred E
Confidence 3
No 108
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.38 E-value=3.1e-12 Score=114.16 Aligned_cols=104 Identities=17% Similarity=0.121 Sum_probs=79.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++.+++++|. .|+|+|+|..|+..++..+...
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 90 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEAL--------------------------------- 90 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 456999999999999999999987 6999999999998776322110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHHHHHHH--hccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISR--ILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta~Ni~~yl~~I~~--~LKPGG~wIN 332 (412)
.. .++.++.+|+.++... ...++||+|++.. |....+++.+.++.+.+ +|||||+++-
T Consensus 91 -----~~-~~v~~~~~d~~~~~~~-~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~ 151 (189)
T 3p9n_A 91 -----GL-SGATLRRGAVAAVVAA-GTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVV 151 (189)
T ss_dssp -----TC-SCEEEEESCHHHHHHH-CCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEE
T ss_pred -----CC-CceEEEEccHHHHHhh-ccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEE
Confidence 00 2378899999886320 1247899999864 33334678899999999 9999999984
No 109
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.38 E-value=4.7e-12 Score=125.50 Aligned_cols=145 Identities=14% Similarity=0.166 Sum_probs=100.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
...+|||+|||+|.++..|+++ +..++|+|+ +.|+..++-.+..
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~--------------------------------- 224 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG--------------------------------- 224 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT---------------------------------
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh---------------------------------
Confidence 4569999999999999999995 678999999 9998766522110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh----- 339 (412)
.....++.+..+||.+... |. .+.||+|+....+. ..++....|++++++|||||.+|-..++.-.
T Consensus 225 -----~~~~~~v~~~~~d~~~~~~-~~-p~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 297 (363)
T 3dp7_A 225 -----LSGSERIHGHGANLLDRDV-PF-PTGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYET 297 (363)
T ss_dssp -----CTTGGGEEEEECCCCSSSC-CC-CCCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHH
T ss_pred -----cCcccceEEEEccccccCC-CC-CCCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccc
Confidence 0112358999999987420 11 26899999887765 4456778999999999999999753222100
Q ss_pred --h----hhc-c-CCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 340 --F----ADL-Y-GQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 340 --~----~~~-~-g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+ ... . ........+.+.+|++++++++||++++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 298 ASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred hhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 0 000 0 000111346799999999999999997644
No 110
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.38 E-value=1.3e-11 Score=113.90 Aligned_cols=136 Identities=10% Similarity=-0.024 Sum_probs=87.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..+. +.+..
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~---~~a~~----------------------------- 124 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI---NLAKK----------------------------- 124 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHH---HHHHH-----------------------------
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHH---HHhhc-----------------------------
Confidence 5679999999999999999988 378999999998864332 11110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
..++.+..+|+.+....+...++||+|++... .......++..++++|||||+++-. ...-....+
T Consensus 125 ---------~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~---~~~~~~~~~ 190 (233)
T 2ipx_A 125 ---------RTNIIPVIEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVIS---IKANCIDST 190 (233)
T ss_dssp ---------CTTEEEECSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEE---EEHHHHCSS
T ss_pred ---------cCCeEEEEcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEE---EcccccccC
Confidence 01367888898873211123478999997543 2223456788999999999999851 111000101
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+ ...+-.++ .+++++.||++++..
T Consensus 191 -~~--~~~~~~~~-~~~l~~~Gf~~~~~~ 215 (233)
T 2ipx_A 191 -AS--AEAVFASE-VKKMQQENMKPQEQL 215 (233)
T ss_dssp -SC--HHHHHHHH-HHTTGGGTEEEEEEE
T ss_pred -CC--HHHHHHHH-HHHHHHCCCceEEEE
Confidence 11 01111233 478889999998754
No 111
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.38 E-value=1.4e-12 Score=125.91 Aligned_cols=110 Identities=16% Similarity=0.009 Sum_probs=76.3
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+++.+.+.++. .++.+|||+|||+|+++..||++|+.|+|+|+|..||..++-.+. ..
T Consensus 33 ~~~~il~~l~l---~~g~~VLDlGcGtG~~a~~La~~g~~V~gvD~S~~ml~~Ar~~~~---~~---------------- 90 (261)
T 3iv6_A 33 DRENDIFLENI---VPGSTVAVIGASTRFLIEKALERGASVTVFDFSQRMCDDLAEALA---DR---------------- 90 (261)
T ss_dssp HHHHHHHTTTC---CTTCEEEEECTTCHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTS---SS----------------
T ss_pred HHHHHHHhcCC---CCcCEEEEEeCcchHHHHHHHhcCCEEEEEECCHHHHHHHHHHHH---hc----------------
Confidence 34444444432 256799999999999999999999999999999999977662210 00
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccC--CCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcE
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS--DPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~--~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~ 329 (412)
.+.+++.++.. .....++||+|++++.+. ..++...+++.++++| |||+
T Consensus 91 --------------------------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 91 --------------------------CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGT 143 (261)
T ss_dssp --------------------------CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSE
T ss_pred --------------------------cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcE
Confidence 01122222111 001246899999887554 3456888999999999 9999
Q ss_pred EEE
Q 015160 330 WIN 332 (412)
Q Consensus 330 wIN 332 (412)
++-
T Consensus 144 l~l 146 (261)
T 3iv6_A 144 VRA 146 (261)
T ss_dssp EEE
T ss_pred EEE
Confidence 973
No 112
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.7e-12 Score=128.66 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=80.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..|+......
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~--------------------------------- 111 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKAN--------------------------------- 111 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHc---------------------------------
Confidence 456999999999999999999998 89999999 5987766433210
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...+++.++.+|+.++.. ..++||+|++.. ++.....+..+++.+.++|||||++|
T Consensus 112 -----~~~~~v~~~~~d~~~~~~---~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 112 -----KLDHVVTIIKGKVEEVEL---PVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp -----TCTTTEEEEESCTTTCCC---SSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCcEEEEECcHHHccC---CCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 011237899999988732 358999999853 46666778899999999999999997
No 113
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.37 E-value=3.2e-12 Score=115.10 Aligned_cols=136 Identities=17% Similarity=0.095 Sum_probs=96.4
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
.+.|.+..+ ++.+|||+|||+|+++..| |+ .|+|+|+|..|+..++-..
T Consensus 27 ~~~l~~~~~-----~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~---------------------- 76 (211)
T 2gs9_A 27 ERALKGLLP-----PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA---------------------- 76 (211)
T ss_dssp HHHHHTTCC-----CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----------------------
T ss_pred HHHHHHhcC-----CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----------------------
Confidence 344555543 4569999999999999888 88 9999999999987655110
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
.++.+..+|+.++. ...++||+|++...+...++..+.++.++++|||||++|-.
T Consensus 77 ----------------------~~~~~~~~d~~~~~---~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 131 (211)
T 2gs9_A 77 ----------------------PEATWVRAWGEALP---FPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVG 131 (211)
T ss_dssp ----------------------TTSEEECCCTTSCC---SCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----------------------CCcEEEEcccccCC---CCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 02567788887753 23578999999887777778899999999999999999854
Q ss_pred cCcc---hh--hhh--ccCCCCC-cccCCCHHHHHHHHHhCC
Q 015160 334 GPLL---YH--FAD--LYGQEDE-MSIELSLEDVKRVALHYG 367 (412)
Q Consensus 334 GPLl---yh--~~~--~~g~~~~-~~ieLS~EEL~~ll~~~G 367 (412)
.|.. |. +.. ..+.... ....+|.++++++++ |
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 132 VLEALSPWAALYRRLGEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EECTTSHHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred ecCCcCcHHHHHHHHhhccCccccccccCCHHHHHHHhc--C
Confidence 3321 11 000 0111111 123479999999997 8
No 114
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.37 E-value=2.4e-12 Score=119.20 Aligned_cols=137 Identities=18% Similarity=0.162 Sum_probs=97.6
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhccccccccccccccc
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~ 247 (412)
|...+..+...+.. .++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++..+... +
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~------- 145 (258)
T 2pwy_A 81 YPKDASAMVTLLDL---APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF-----W------- 145 (258)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----C-------
T ss_pred cchHHHHHHHHcCC---CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-----c-------
Confidence 44445555555532 25679999999999999999998 689999999999997766332100 0
Q ss_pred ccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 015160 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 248 ~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPG 327 (412)
+ ..++.+..+|+.+... ..++||+|+.. .++..++++.+.++||||
T Consensus 146 -------------g-------------~~~v~~~~~d~~~~~~---~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~g 191 (258)
T 2pwy_A 146 -------------Q-------------VENVRFHLGKLEEAEL---EEAAYDGVALD-----LMEPWKVLEKAALALKPD 191 (258)
T ss_dssp -------------C-------------CCCEEEEESCGGGCCC---CTTCEEEEEEE-----SSCGGGGHHHHHHHEEEE
T ss_pred -------------C-------------CCCEEEEECchhhcCC---CCCCcCEEEEC-----CcCHHHHHHHHHHhCCCC
Confidence 0 0136788899887621 24789999863 234457899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 328 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
|+++-+.|.. -..+++...+++.||+.++
T Consensus 192 G~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~ 220 (258)
T 2pwy_A 192 RFLVAYLPNI----------------TQVLELVRAAEAHPFRLER 220 (258)
T ss_dssp EEEEEEESCH----------------HHHHHHHHHHTTTTEEEEE
T ss_pred CEEEEEeCCH----------------HHHHHHHHHHHHCCCceEE
Confidence 9998644321 1245777788889999876
No 115
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.36 E-value=2.2e-11 Score=119.73 Aligned_cols=162 Identities=18% Similarity=0.155 Sum_probs=106.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+.. .
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~---~----------------------------- 228 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFAD---A----------------------------- 228 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH---T-----------------------------
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHh---c-----------------------------
Confidence 5679999999999999999998 568999999 9999766622210 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecC--cch----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGP--LLY---- 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GP--Lly---- 338 (412)
....++.+..+|+.+.. | ..||+|+....+... +.....++.++++|||||++|-..+ .+-
T Consensus 229 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 297 (374)
T 1qzz_A 229 ------GLADRVTVAEGDFFKPL--P---VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGAD 297 (374)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------
T ss_pred ------CCCCceEEEeCCCCCcC--C---CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCC
Confidence 01124889999998622 2 349999987655433 2346899999999999998874332 210
Q ss_pred -hhhhccCC---CCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEcC
Q 015160 339 -HFADLYGQ---EDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKKS 403 (412)
Q Consensus 339 -h~~~~~g~---~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~~ 403 (412)
.+....+. .....-.++.++++++++++||++++.......+ ..+....++++|+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~---------~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 298 RFFSTLLDLRMLTFMGGRVRTRDEVVDLAGSAGLALASERTSGSTT---------LPFDFSILEFTAVS 357 (374)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCHHHHHHHHHTTTEEEEEEEEECCSS---------CSSCEEEEEEEECC
T ss_pred cchhhhcchHHHHhCCCcCCCHHHHHHHHHHCCCceEEEEECCCCc---------ccCCcEEEEEEECc
Confidence 00000000 0000235799999999999999998865322110 11233567788874
No 116
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.36 E-value=3.8e-12 Score=125.00 Aligned_cols=101 Identities=16% Similarity=0.251 Sum_probs=79.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|. .|+|+|+| .|+..|+-.+.. +
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~----~----------------------------- 83 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVEL----N----------------------------- 83 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHH----c-----------------------------
Confidence 456999999999999999999997 89999999 698766633211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...+++.++.+|+.++.. ..++||+|++. +++.....+..++..+.++|||||++|
T Consensus 84 -----~~~~~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 84 -----GFSDKITLLRGKLEDVHL---PFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp -----TCTTTEEEEESCTTTSCC---SSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred -----CCCCCEEEEECchhhccC---CCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 011247889999988643 24789999986 456666678899999999999999998
No 117
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.36 E-value=4e-13 Score=126.58 Aligned_cols=139 Identities=15% Similarity=0.163 Sum_probs=82.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|+++..|+++|. .|+|+|+|+.||..+.... .+ ... ..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~---~~---~~~-------------------~~---- 87 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD---ER---VVV-------------------ME---- 87 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC---TT---EEE-------------------EC----
T ss_pred CCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC---cc---ccc-------------------cc----
Confidence 456999999999999999999996 9999999999986543110 00 000 00
Q ss_pred CCCCCCCCCceeEEe-cccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCG-GDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~-GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~~g 345 (412)
..++.+.. +|+.... .....||+|+.. +..+|+.++++|||||+++- +.|..-......+
T Consensus 88 -------~~~~~~~~~~~~~~~~---~d~~~~D~v~~~--------l~~~l~~i~rvLkpgG~lv~~~~p~~e~~~~~~~ 149 (232)
T 3opn_A 88 -------QFNFRNAVLADFEQGR---PSFTSIDVSFIS--------LDLILPPLYEILEKNGEVAALIKPQFEAGREQVG 149 (232)
T ss_dssp -------SCCGGGCCGGGCCSCC---CSEEEECCSSSC--------GGGTHHHHHHHSCTTCEEEEEECHHHHSCHHHHC
T ss_pred -------cceEEEeCHhHcCcCC---CCEEEEEEEhhh--------HHHHHHHHHHhccCCCEEEEEECcccccCHHHhC
Confidence 00111111 2322100 012345544322 25789999999999999986 3443211000011
Q ss_pred CC----CCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QE----DEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~----~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.. +......+.+++.++++++||+++...
T Consensus 150 ~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~ 182 (232)
T 3opn_A 150 KNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLT 182 (232)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEE
T ss_pred cCCeecCcchhHHHHHHHHHHHHHCCCEEEEEE
Confidence 00 111123488999999999999998754
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.35 E-value=5.6e-12 Score=120.91 Aligned_cols=128 Identities=20% Similarity=0.189 Sum_probs=94.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|.. |+|+|+|..|+..++..+.. +
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~----n----------------------------- 171 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHL----N----------------------------- 171 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH----c-----------------------------
Confidence 4679999999999999999999985 99999999999776622110 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
...+++.+..+|+.++.. .++||+|+.. ......++++.+.++|||||+++-.... ...
T Consensus 172 -----~~~~~v~~~~~D~~~~~~----~~~fD~Vi~~----~p~~~~~~l~~~~~~LkpgG~l~~~~~~---~~~----- 230 (278)
T 2frn_A 172 -----KVEDRMSAYNMDNRDFPG----ENIADRILMG----YVVRTHEFIPKALSIAKDGAIIHYHNTV---PEK----- 230 (278)
T ss_dssp -----TCTTTEEEECSCTTTCCC----CSCEEEEEEC----CCSSGGGGHHHHHHHEEEEEEEEEEEEE---EGG-----
T ss_pred -----CCCceEEEEECCHHHhcc----cCCccEEEEC----CchhHHHHHHHHHHHCCCCeEEEEEEee---ccc-----
Confidence 011237889999988643 5789999774 3334467899999999999999842110 000
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
....-..+++.+++++.||++..
T Consensus 231 --~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 231 --LMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp --GTTTTTHHHHHHHHHHTTCEEEE
T ss_pred --cccccHHHHHHHHHHHcCCeeEE
Confidence 01234678999999999999876
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.35 E-value=5.7e-12 Score=124.14 Aligned_cols=97 Identities=18% Similarity=0.174 Sum_probs=77.3
Q ss_pred CCCeEEEecCCCChhH-HHHHH-cCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLA-LEISH-LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa-~eLA~-~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++ ..+|+ .|..|+|+|+|..|+..|+-.+...
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------------------------------- 169 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------------------------------- 169 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH--------------------------------
T ss_pred CcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc--------------------------------
Confidence 6789999999999875 66676 4999999999999998887433210
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
.. .++.+..||+.++. .++||+|+.... .++..++++.++++|||||+++-
T Consensus 170 ------gl-~~v~~v~gDa~~l~-----d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 170 ------GV-DGVNVITGDETVID-----GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp ------TC-CSEEEEESCGGGGG-----GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEE
T ss_pred ------CC-CCeEEEECchhhCC-----CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEE
Confidence 11 24889999998863 478999987544 45678999999999999999985
No 120
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.35 E-value=1.7e-11 Score=116.50 Aligned_cols=136 Identities=20% Similarity=0.212 Sum_probs=98.8
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
.+++.+.+.++ .++.+|||+|||+|.++..|++. +..|+|+|+|..|+..++......
T Consensus 97 ~l~~~~l~~~~----~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~---------------- 156 (276)
T 2b3t_A 97 CLVEQALARLP----EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL---------------- 156 (276)
T ss_dssp HHHHHHHHHSC----SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH----------------
T ss_pred HHHHHHHHhcc----cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 35566666554 14569999999999999999976 789999999999998776322100
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCCh-------------------
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTA------------------- 310 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta------------------- 310 (412)
+ ..++.+..+|+.+... .++||+|++.. |+...
T Consensus 157 ----------~-------------~~~v~~~~~d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~ 209 (276)
T 2b3t_A 157 ----------A-------------IKNIHILQSDWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVA 209 (276)
T ss_dssp ----------T-------------CCSEEEECCSTTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBC
T ss_pred ----------C-------------CCceEEEEcchhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHHcC
Confidence 0 0137789999887532 46899999873 33321
Q ss_pred -----hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 311 -----HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 311 -----~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
......++.+.++|||||+++-.- + ..+.+++++++++.||+.+.
T Consensus 210 ~~~g~~~~~~~l~~~~~~LkpgG~l~~~~----------~-------~~~~~~~~~~l~~~Gf~~v~ 259 (276)
T 2b3t_A 210 ADSGMADIVHIIEQSRNALVSGGFLLLEH----------G-------WQQGEAVRQAFILAGYHDVE 259 (276)
T ss_dssp HHHHTHHHHHHHHHHGGGEEEEEEEEEEC----------C-------SSCHHHHHHHHHHTTCTTCC
T ss_pred CCcHHHHHHHHHHHHHHhcCCCCEEEEEE----------C-------chHHHHHHHHHHHCCCcEEE
Confidence 346778999999999999998421 0 13578999999999998654
No 121
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.35 E-value=1.1e-11 Score=113.98 Aligned_cols=128 Identities=13% Similarity=0.134 Sum_probs=88.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+.. . +
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~---~-----------------------~----- 86 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD---S-----------------------E----- 86 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---S-----------------------C-----
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH---c-----------------------C-----
Confidence 4568999999999999999998 78999999999999776632210 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh----h---h--HHHHHHHHHHhccCCcEEEEecCcc
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA----H---N--IVEYIEIISRILKDGGVWINLGPLL 337 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta----~---N--i~~yl~~I~~~LKPGG~wIN~GPLl 337 (412)
..++.++.+|+.++.. ....++||.|+.+| -+.- + . ...+++.++++|||||+++-..+.
T Consensus 87 --------~~nv~~~~~d~~~l~~-~~~~~~~d~v~~~~-~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~- 155 (213)
T 2fca_A 87 --------AQNVKLLNIDADTLTD-VFEPGEVKRVYLNF-SDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN- 155 (213)
T ss_dssp --------CSSEEEECCCGGGHHH-HCCTTSCCEEEEES-CCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC-
T ss_pred --------CCCEEEEeCCHHHHHh-hcCcCCcCEEEEEC-CCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC-
Confidence 0237888999887531 01257899987654 2210 0 0 257899999999999999842110
Q ss_pred hhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 338 yh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
.--.+++..++.+.||++...
T Consensus 156 ---------------~~~~~~~~~~~~~~g~~~~~~ 176 (213)
T 2fca_A 156 ---------------RGLFEYSLKSFSEYGLLLTYV 176 (213)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEEEE
T ss_pred ---------------HHHHHHHHHHHHHCCCccccc
Confidence 011346667777889988764
No 122
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.35 E-value=1.6e-12 Score=115.83 Aligned_cols=130 Identities=15% Similarity=0.107 Sum_probs=79.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..++..+.. . +
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-----------------------~---~----- 78 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER-----------------------F---G----- 78 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC----------------------------------------------
T ss_pred CCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH-----------------------h---C-----
Confidence 5679999999999999999999 56999999999998655411100 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEec-ccCC-------------------------hhhHHHHHHH
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCF-FIDT-------------------------AHNIVEYIEI 319 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~F-FIDt-------------------------a~Ni~~yl~~ 319 (412)
.++.+..+|+.+.... ....++||+|++.. |... .....++++.
T Consensus 79 ---------~~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 149 (215)
T 4dzr_A 79 ---------AVVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAAL 149 (215)
T ss_dssp -------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTC
T ss_pred ---------CceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHH
Confidence 0356788888873320 00127899999852 2111 0112678899
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHH--hCCCEEEEEe
Q 015160 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVAL--HYGFEFEKEK 374 (412)
Q Consensus 320 I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~--~~GFeii~e~ 374 (412)
++++|||||+++-+.. -.-..+++.+++. +.||..++..
T Consensus 150 ~~~~LkpgG~l~~~~~----------------~~~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 150 PPYVLARGRAGVFLEV----------------GHNQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp CGGGBCSSSEEEEEEC----------------TTSCHHHHHHHTGGGGGGTEECCEE
T ss_pred HHHHhcCCCeEEEEEE----------------CCccHHHHHHHHHHhhcCCceEEEE
Confidence 9999999999432110 0134678899999 8999776543
No 123
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.34 E-value=8.7e-12 Score=113.61 Aligned_cols=129 Identities=14% Similarity=0.098 Sum_probs=91.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..++..+... +
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~----- 89 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV--------------------------G----- 89 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------------------C-----
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc--------------------------C-----
Confidence 4568999999999999999998 579999999999997766322100 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh----h-----hHHHHHHHHHHhccCCcEEEEecCcc
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA----H-----NIVEYIEIISRILKDGGVWINLGPLL 337 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta----~-----Ni~~yl~~I~~~LKPGG~wIN~GPLl 337 (412)
..++.++.+|+.++.. ....++||+|++.|- +.. + ....+++.++++|||||+++-..+.
T Consensus 90 --------~~~v~~~~~d~~~~~~-~~~~~~~D~i~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~- 158 (214)
T 1yzh_A 90 --------VPNIKLLWVDGSDLTD-YFEDGEIDRLYLNFS-DPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN- 158 (214)
T ss_dssp --------CSSEEEEECCSSCGGG-TSCTTCCSEEEEESC-CCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC-
T ss_pred --------CCCEEEEeCCHHHHHh-hcCCCCCCEEEEECC-CCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC-
Confidence 0237889999887531 012578999998753 211 0 1257999999999999998742110
Q ss_pred hhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 338 yh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.--.+++.+++.+.||+++...
T Consensus 159 ---------------~~~~~~~~~~~~~~g~~~~~~~ 180 (214)
T 1yzh_A 159 ---------------RGLFEYSLVSFSQYGMKLNGVW 180 (214)
T ss_dssp ---------------HHHHHHHHHHHHHHTCEEEEEE
T ss_pred ---------------HHHHHHHHHHHHHCCCeeeecc
Confidence 0013677888888999988754
No 124
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.33 E-value=2.9e-11 Score=120.09 Aligned_cols=151 Identities=17% Similarity=0.208 Sum_probs=103.5
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
...|.+.++-. +..+|||+|||+|.++..|+++ +..++++|+ ..|+..++-.+...
T Consensus 191 ~~~l~~~~~~~---~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~------------------ 248 (369)
T 3gwz_A 191 AGQVAAAYDFS---GAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR------------------ 248 (369)
T ss_dssp HHHHHHHSCCT---TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT------------------
T ss_pred HHHHHHhCCCc---cCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc------------------
Confidence 34455555422 5679999999999999999998 668999999 99987666322100
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~w 330 (412)
....++.+..+||.+.. | ..||+|+....+... +...+.|+.++++|||||++
T Consensus 249 --------------------~l~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 303 (369)
T 3gwz_A 249 --------------------GLADRCEILPGDFFETI--P---DGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRL 303 (369)
T ss_dssp --------------------TCTTTEEEEECCTTTCC--C---SSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEE
T ss_pred --------------------CcCCceEEeccCCCCCC--C---CCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 11235889999998422 2 379999987655433 33458999999999999999
Q ss_pred EEecCcchh-------hhhc--cCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 331 INLGPLLYH-------FADL--YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 331 IN~GPLlyh-------~~~~--~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|-..++.-. +.+. ... ...-+.+.+|++++++++||++++..
T Consensus 304 ~i~e~~~~~~~~~~~~~~d~~~~~~--~~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 304 LVIDNLIDERPAASTLFVDLLLLVL--VGGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp EEEEEBCCSSCCHHHHHHHHHHHHH--HSCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred EEEEeccCCCCCCchhHhhHHHHhh--cCCccCCHHHHHHHHHHCCCeEEEEE
Confidence 853222100 0000 000 01236899999999999999998865
No 125
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.33 E-value=6.2e-12 Score=112.30 Aligned_cols=104 Identities=11% Similarity=0.086 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..|+++ | -.|+|+|+|..|+..++..+...
T Consensus 22 ~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 70 (197)
T 3eey_A 22 EGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL------------------------------- 70 (197)
T ss_dssp TTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4579999999999999999997 2 48999999999998776332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-c--------cCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-F--------IDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-F--------IDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.++.+|+.++... ..++||+|++.. | +....+..++++.+.++|||||+++-
T Consensus 71 -------~~~~~v~~~~~d~~~~~~~--~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~ 137 (197)
T 3eey_A 71 -------NLIDRVTLIKDGHQNMDKY--IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITV 137 (197)
T ss_dssp -------TCGGGEEEECSCGGGGGGT--CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCCeEEEECCHHHHhhh--ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEE
Confidence 0112478899998887421 247899999775 2 23344567899999999999999985
No 126
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.33 E-value=3.3e-12 Score=110.38 Aligned_cols=101 Identities=14% Similarity=0.107 Sum_probs=71.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..+... +
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~------- 87 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRT--------------------------G------- 87 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHH--------------------------T-------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------C-------
Confidence 3468999999999999999999999999999999998776322110 0
Q ss_pred CCCCCCCCceeEEecccccccC-CCCCCCCccEEEEec-ccCChhhHHHHHHHHH--HhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCF-FIDTAHNIVEYIEIIS--RILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~-~~~~~~~fD~VvT~F-FIDta~Ni~~yl~~I~--~~LKPGG~wIN 332 (412)
. ++.+..+|+.+... .+...++||+|++.. |... ..+.++.+. ++|||||+++-
T Consensus 88 -----~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~~~---~~~~~~~~~~~~~L~~gG~~~~ 145 (171)
T 1ws6_A 88 -----L--GARVVALPVEVFLPEAKAQGERFTVAFMAPPYAMD---LAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp -----C--CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTTSC---TTHHHHHHHHHTCEEEEEEEEE
T ss_pred -----C--ceEEEeccHHHHHHhhhccCCceEEEEECCCCchh---HHHHHHHHHhhcccCCCcEEEE
Confidence 0 25778888877421 011124799999873 2233 334555555 99999999984
No 127
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.32 E-value=2.8e-11 Score=114.85 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=97.6
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhccccccccccccccc
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~ 247 (412)
|+.-+..+...+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+...
T Consensus 97 ~~~~~~~i~~~~~~---~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------- 160 (277)
T 1o54_A 97 YPKDSSFIAMMLDV---KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW------------- 160 (277)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-------------
T ss_pred CHHHHHHHHHHhCC---CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-------------
Confidence 34444455554432 25679999999999999999998 579999999999997776322110
Q ss_pred ccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 015160 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 248 ~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPG 327 (412)
....++.+..+|+.+... .+.||+|+.. .++..++++.+.++||||
T Consensus 161 -------------------------~~~~~v~~~~~d~~~~~~----~~~~D~V~~~-----~~~~~~~l~~~~~~L~pg 206 (277)
T 1o54_A 161 -------------------------GLIERVTIKVRDISEGFD----EKDVDALFLD-----VPDPWNYIDKCWEALKGG 206 (277)
T ss_dssp -------------------------TCGGGEEEECCCGGGCCS----CCSEEEEEEC-----CSCGGGTHHHHHHHEEEE
T ss_pred -------------------------CCCCCEEEEECCHHHccc----CCccCEEEEC-----CcCHHHHHHHHHHHcCCC
Confidence 001237788899887632 4689999863 234568899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 328 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
|+++-..|.. -..+++.+.+++.||..++.
T Consensus 207 G~l~~~~~~~----------------~~~~~~~~~l~~~gf~~~~~ 236 (277)
T 1o54_A 207 GRFATVCPTT----------------NQVQETLKKLQELPFIRIEV 236 (277)
T ss_dssp EEEEEEESSH----------------HHHHHHHHHHHHSSEEEEEE
T ss_pred CEEEEEeCCH----------------HHHHHHHHHHHHCCCceeEE
Confidence 9998644321 12367778888899998774
No 128
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.32 E-value=2.3e-12 Score=113.53 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=85.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+||++|||. | ++|+|..|+..++-..
T Consensus 12 ~g~~vL~~~~g~-------------v-~vD~s~~ml~~a~~~~------------------------------------- 40 (176)
T 2ld4_A 12 AGQFVAVVWDKS-------------S-PVEALKGLVDKLQALT------------------------------------- 40 (176)
T ss_dssp TTSEEEEEECTT-------------S-CHHHHHHHHHHHHHHT-------------------------------------
T ss_pred CCCEEEEecCCc-------------e-eeeCCHHHHHHHHHhc-------------------------------------
Confidence 678999999996 2 3899999997665110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh-hhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-HNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta-~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
..++.+..+|+.++...+...++||+|++.+.+... .+..+.|++++++|||||+++-..|..- . .+ .
T Consensus 41 ------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~---~-~~-~ 109 (176)
T 2ld4_A 41 ------GNEGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVET---A-VD-N 109 (176)
T ss_dssp ------TTTSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEES---S-SC-S
T ss_pred ------ccCcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccccc---c-cc-c
Confidence 001567888988763211135889999988766665 6778999999999999999996544311 0 01 1
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
..+..+.+++.++++++|| +..
T Consensus 110 --~~~~~~~~~~~~~l~~aGf-i~~ 131 (176)
T 2ld4_A 110 --NSKVKTASKLCSALTLSGL-VEV 131 (176)
T ss_dssp --SSSSCCHHHHHHHHHHTTC-EEE
T ss_pred --ccccCCHHHHHHHHHHCCC-cEe
Confidence 2345789999999999999 553
No 129
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.31 E-value=2.6e-11 Score=103.79 Aligned_cols=138 Identities=12% Similarity=0.042 Sum_probs=90.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..++++ +..++|+|+|. |+..
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~--------------------------------------- 61 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI--------------------------------------- 61 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------------------------------------
Confidence 5669999999999999999998 47999999999 8410
Q ss_pred CCCCCCCCCCCceeEEecccccccC---CC--CCCCCccEEEEecccCChhhH-----------HHHHHHHHHhccCCcE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYS---DP--SQVGAWDAVVTCFFIDTAHNI-----------VEYIEIISRILKDGGV 329 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~---~~--~~~~~fD~VvT~FFIDta~Ni-----------~~yl~~I~~~LKPGG~ 329 (412)
.++.+..+|+.+... .+ ...++||+|++...+....+. ..+++.+.++|||||+
T Consensus 62 ----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~ 131 (180)
T 1ej0_A 62 ----------VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS 131 (180)
T ss_dssp ----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
T ss_pred ----------CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcE
Confidence 125677888876520 00 014789999986433322221 6889999999999999
Q ss_pred EEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 015160 330 WINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 330 wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
++-..+. .-..+++...+... |+.+......... ..-...|+++++.
T Consensus 132 l~~~~~~----------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~ 178 (180)
T 1ej0_A 132 FVVKVFQ----------------GEGFDEYLREIRSL-FTKVKVRKPDSSR---------ARSREVYIVATGR 178 (180)
T ss_dssp EEEEEES----------------STTHHHHHHHHHHH-EEEEEEECCTTSC---------TTCCEEEEEEEEE
T ss_pred EEEEEec----------------CCcHHHHHHHHHHh-hhhEEeecCCccc---------ccCceEEEEEccC
Confidence 9853221 12346777777774 7766543222111 1224667777764
No 130
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.31 E-value=7.8e-13 Score=122.01 Aligned_cols=136 Identities=13% Similarity=0.020 Sum_probs=93.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..||++|..|+|+|+|..|+..++..+...
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------------- 123 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIALARNNAEVY---------------------------------- 123 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT----------------------------------
T ss_pred CCCEEEECccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHc----------------------------------
Confidence 4569999999999999999999999999999999998776332110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC-
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE- 347 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~- 347 (412)
....++.++.+|+.++.. .++||+|++..-+....+....+..++++|||||++|- -+.... ...
T Consensus 124 ----~~~~~~~~~~~d~~~~~~----~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~-----~~~~~~-~~~~ 189 (241)
T 3gdh_A 124 ----GIADKIEFICGDFLLLAS----FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIF-----RLSKKI-TNNI 189 (241)
T ss_dssp ----TCGGGEEEEESCHHHHGG----GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHH-----HHHHHH-CSCE
T ss_pred ----CCCcCeEEEECChHHhcc----cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHH-----HHHHhh-CCce
Confidence 001247899999988642 47999999875333333344467788999999999762 111100 000
Q ss_pred -CCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 348 -DEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 348 -~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
....-.++.+++..++..-|.-.+.
T Consensus 190 ~~~lp~~~~~~~~~~~l~~~g~~~i~ 215 (241)
T 3gdh_A 190 VYFLPRNADIDQVASLAGPGGQVEIE 215 (241)
T ss_dssp EEEEETTBCHHHHHHTTCTTCCEEEE
T ss_pred EEECCCCCCHHHHHHHhccCCCEEEE
Confidence 0012346889999998876654443
No 131
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.31 E-value=2.2e-11 Score=111.68 Aligned_cols=142 Identities=20% Similarity=0.224 Sum_probs=94.0
Q ss_pred CcchHHHHHHHHHHHhc--CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEE
Q 015160 142 LADVDKVRCIIRNIVRD--WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQG 216 (412)
Q Consensus 142 ~~d~~kv~s~L~q~~RD--WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~G 216 (412)
..|-+.+...+.++.+. |-..-..+.. .++..+.... ++.+|||+|||+|.++..||+. |..|+|
T Consensus 19 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~ 88 (221)
T 3u81_A 19 PGDPQSVLEAIDTYCTQKEWAMNVGDAKG----QIMDAVIREY------SPSLVLELGAYCGYSAVRMARLLQPGARLLT 88 (221)
T ss_dssp TTCHHHHHHHHHHHHHHHTCGGGCCHHHH----HHHHHHHHHH------CCSEEEEECCTTSHHHHHHHTTSCTTCEEEE
T ss_pred CCCHHHHHHHHHHHhhhcCcCcccCHHHH----HHHHHHHHhc------CCCEEEEECCCCCHHHHHHHHhCCCCCEEEE
Confidence 35557788888888764 5322222222 2444444432 3569999999999999999984 789999
Q ss_pred EeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CC--C
Q 015160 217 NEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DP--S 293 (412)
Q Consensus 217 nD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~-~~--~ 293 (412)
+|+|..|+..|+-.+... ...+++.++.||+.++.. .+ .
T Consensus 89 vD~~~~~~~~a~~~~~~~--------------------------------------~~~~~v~~~~~d~~~~l~~~~~~~ 130 (221)
T 3u81_A 89 MEINPDCAAITQQMLNFA--------------------------------------GLQDKVTILNGASQDLIPQLKKKY 130 (221)
T ss_dssp EESCHHHHHHHHHHHHHH--------------------------------------TCGGGEEEEESCHHHHGGGTTTTS
T ss_pred EeCChHHHHHHHHHHHHc--------------------------------------CCCCceEEEECCHHHHHHHHHHhc
Confidence 999999998776332210 011247889999876422 10 0
Q ss_pred CCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 294 QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 294 ~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++||+|+.........+..++++.+ ++|||||++|-
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~ 168 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLA 168 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEE
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEE
Confidence 126899997654333334455677777 99999999984
No 132
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.31 E-value=2.7e-11 Score=112.43 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=78.0
Q ss_pred CCCeEEEecCCCChhHHHHHH--cCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISH--LGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||+ .+..|+|+|+|..|+..|+..+...
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 118 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY-------------------------------- 118 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 456999999999999999999 5789999999999998776333210
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
....++.+..+|+.+.... ...++||+|+... ...+...+++.+.++|||||++|--
T Consensus 119 ------~~~~~v~~~~~d~~~~~~~-~~~~~fD~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 119 ------HFENQVRIIEGNALEQFEN-VNDKVYDMIFIDA---AKAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp ------TCTTTEEEEESCGGGCHHH-HTTSCEEEEEEET---TSSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred ------CCCCcEEEEECCHHHHHHh-hccCCccEEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0112478999999875320 1147899997543 2445778999999999999999853
No 133
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.30 E-value=6.9e-12 Score=114.18 Aligned_cols=104 Identities=15% Similarity=0.044 Sum_probs=75.3
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
+.+|||+|||+|.++.+++.+|. .|+|+|+|..|+..++..+... ++
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--------------------------~~------ 101 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTL--------------------------KC------ 101 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------TC------
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHh--------------------------CC------
Confidence 46899999999999999988886 8999999999998776322110 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCC-ccEEEEecccCChhhHHHHHHHH--HHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGA-WDAVVTCFFIDTAHNIVEYIEII--SRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~-fD~VvT~FFIDta~Ni~~yl~~I--~~~LKPGG~wIN 332 (412)
...++.++.+|+.++... ...++ ||+|++..-+. ..+..+.++.+ .++|||||+++-
T Consensus 102 -----~~~~v~~~~~d~~~~~~~-~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i 161 (201)
T 2ift_A 102 -----SSEQAEVINQSSLDFLKQ-PQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYV 161 (201)
T ss_dssp -----CTTTEEEECSCHHHHTTS-CCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CccceEEEECCHHHHHHh-hccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEE
Confidence 002378899998875321 12468 99998764222 34566788888 668999999984
No 134
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.30 E-value=3.6e-11 Score=117.13 Aligned_cols=138 Identities=17% Similarity=0.151 Sum_probs=93.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++.++++. +..|+|+|+|..|+..++-.+..... ..
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~------------------------~~---- 146 (304)
T 3bwc_A 95 KPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR------------------------SL---- 146 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG------------------------GG----
T ss_pred CCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc------------------------cc----
Confidence 4579999999999999999988 46899999999999877632210000 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhH--HHHHHHHHHhccCCcEEEEecCcchhhhh
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNI--VEYIEIISRILKDGGVWINLGPLLYHFAD 342 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni--~~yl~~I~~~LKPGG~wIN~GPLlyh~~~ 342 (412)
...++.++.+|+.++... ...++||+|++..+... ...+ .++++.++++|||||+++...+-.|.
T Consensus 147 -------~~~~v~~~~~D~~~~~~~-~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~--- 215 (304)
T 3bwc_A 147 -------ADPRATVRVGDGLAFVRQ-TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL--- 215 (304)
T ss_dssp -------GCTTEEEEESCHHHHHHS-SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT---
T ss_pred -------CCCcEEEEECcHHHHHHh-ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc---
Confidence 012478899998875321 02578999998654322 1222 58999999999999999863221110
Q ss_pred ccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 343 LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 343 ~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-....+++.+.++++||..+...
T Consensus 216 ---------~~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 216 ---------DLELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp ---------CHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ---------chHHHHHHHHHHHhCCCCcEEEE
Confidence 01246788889999999887644
No 135
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.29 E-value=2.7e-11 Score=115.33 Aligned_cols=162 Identities=17% Similarity=0.094 Sum_probs=101.4
Q ss_pred HHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhh
Q 015160 155 IVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFIL 231 (412)
Q Consensus 155 ~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~fil 231 (412)
=+|.|... |. .+-..|.+-+....-+++.+|||+|||+|.++..||+. | -.|+|+|+|..|+..++-.
T Consensus 51 e~r~w~p~----rs----klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~- 121 (233)
T 4df3_A 51 EYREWNAY----RS----KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTV- 121 (233)
T ss_dssp EEEECCTT----TC----HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHH-
T ss_pred eeeeECCC----ch----HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHh-
Confidence 37888753 32 24455555444333458899999999999999999987 4 4799999999999654411
Q ss_pred hcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh
Q 015160 232 NHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH 311 (412)
Q Consensus 232 n~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~ 311 (412)
+.+ ..|+..+.+|..+....+...+.+|+|+..+.. ..
T Consensus 122 --a~~--------------------------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~--~~ 159 (233)
T 4df3_A 122 --VRD--------------------------------------RRNIFPILGDARFPEKYRHLVEGVDGLYADVAQ--PE 159 (233)
T ss_dssp --STT--------------------------------------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCCC--TT
T ss_pred --hHh--------------------------------------hcCeeEEEEeccCccccccccceEEEEEEeccC--Ch
Confidence 111 013555666665543223345789988754432 23
Q ss_pred hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 312 NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 312 Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+....+..+++.|||||.++-. +.+.-.+. ..++. -...+..+.|++.||++++..
T Consensus 160 ~~~~~l~~~~r~LKpGG~lvI~--ik~r~~d~-~~p~~----~~~~~ev~~L~~~GF~l~e~i 215 (233)
T 4df3_A 160 QAAIVVRNARFFLRDGGYMLMA--IKARSIDV-TTEPS----EVYKREIKTLMDGGLEIKDVV 215 (233)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE--EECCHHHH-HTCCC----HHHHHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHHHHhccCCCEEEEE--EecccCCC-CCChH----HHHHHHHHHHHHCCCEEEEEE
Confidence 4668899999999999999842 11111111 11111 112344456778899998754
No 136
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.29 E-value=6.4e-11 Score=116.82 Aligned_cols=140 Identities=14% Similarity=0.114 Sum_probs=98.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||||||+|.++.++|..+ ..|+|+|+|..|+..|+..+...
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~------------------------------- 251 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS------------------------------- 251 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 56789999999999999999986 89999999999998777332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc--cCChhh----HHHHHHHHHHhccCCcEEEEecCcc
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF--IDTAHN----IVEYIEIISRILKDGGVWINLGPLL 337 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FF--IDta~N----i~~yl~~I~~~LKPGG~wIN~GPLl 337 (412)
... ++.+..+|+.++.. ..+.||+|++. |. +....+ ..++++.+.++|||||.++-+.|
T Consensus 252 -------g~~-~i~~~~~D~~~~~~---~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~-- 318 (354)
T 3tma_A 252 -------GLS-WIRFLRADARHLPR---FFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL-- 318 (354)
T ss_dssp -------TCT-TCEEEECCGGGGGG---TCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES--
T ss_pred -------CCC-ceEEEeCChhhCcc---ccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC--
Confidence 011 37889999998753 24569999985 32 222222 25789999999999999985321
Q ss_pred hhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEE
Q 015160 338 YHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRK 401 (412)
Q Consensus 338 yh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK 401 (412)
+.+.++.+++ .||+..+...+ | .....+.+||++|
T Consensus 319 -----------------~~~~~~~~~~-~g~~~~~~~~l---~--------~g~l~~~i~vl~r 353 (354)
T 3tma_A 319 -----------------RPALLKRALP-PGFALRHARVV---E--------QGGVYPRVFVLEK 353 (354)
T ss_dssp -----------------CHHHHHHHCC-TTEEEEEEEEC---C--------BTTBCCEEEEEEE
T ss_pred -----------------CHHHHHHHhh-cCcEEEEEEEE---E--------eCCEEEEEEEEEc
Confidence 2334555666 89999876642 1 2233577888877
No 137
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.29 E-value=1.1e-11 Score=121.69 Aligned_cols=138 Identities=19% Similarity=0.158 Sum_probs=86.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||||.++..|+++|. .|+|+|+|+.||..+.. +. .. +
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r--~~---~r-----------------------v----- 131 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLR--QD---DR-----------------------V----- 131 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHH--TC---TT-----------------------E-----
T ss_pred cccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHH--hC---cc-----------------------c-----
Confidence 456999999999999999999997 89999999999854220 00 00 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~~g 345 (412)
..+...++..+........+||+|++.. |++ +...|..++++|||||.+|- +.|.+-.-....+
T Consensus 132 ----------~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s----l~~vL~e~~rvLkpGG~lv~lvkPqfe~~~~~~~ 197 (291)
T 3hp7_A 132 ----------RSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS----LNLILPALAKILVDGGQVVALVKPQFEAGREQIG 197 (291)
T ss_dssp ----------EEECSCCGGGCCGGGCTTCCCSEEEECCSSSC----GGGTHHHHHHHSCTTCEEEEEECGGGTSCGGGCC
T ss_pred ----------ceecccCceecchhhCCCCCCCEEEEEeeHhh----HHHHHHHHHHHcCcCCEEEEEECcccccChhhcC
Confidence 0011112211110000124599887643 553 45789999999999999986 4553211111111
Q ss_pred --CC--CCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 346 --QE--DEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 346 --~~--~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
+. +......+.+++..++..+||++...
T Consensus 198 ~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~ 229 (291)
T 3hp7_A 198 KNGIVRESSIHEKVLETVTAFAVDYGFSVKGL 229 (291)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEE
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 10 01122358899999999999998874
No 138
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.29 E-value=4e-12 Score=128.35 Aligned_cols=117 Identities=20% Similarity=0.217 Sum_probs=85.5
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.+++.|.+.+... ..++.+|||+|||+|.++..++++|..|+|+|+|..|+..++..+.. +
T Consensus 218 ~ll~~l~~~l~~~-~~~~~~VLDlGcG~G~~~~~la~~g~~V~gvDis~~al~~A~~n~~~----~-------------- 278 (381)
T 3dmg_A 218 LLLEALQERLGPE-GVRGRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEA----N-------------- 278 (381)
T ss_dssp HHHHHHHHHHCTT-TTTTCEEEEETCTTSTTHHHHHHTTCEEEEEESBHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHHHhhccc-CCCCCEEEEEeeeCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 3555555543210 11457999999999999999999999999999999999877632210 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC-----ChhhHHHHHHHHHHhccCC
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID-----ta~Ni~~yl~~I~~~LKPG 327 (412)
. .++.++.+|+.+... ..++||+|++..-+. +..+..++|+.+.++||||
T Consensus 279 --------~--------------~~v~~~~~D~~~~~~---~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpG 333 (381)
T 3dmg_A 279 --------A--------------LKAQALHSDVDEALT---EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPG 333 (381)
T ss_dssp --------T--------------CCCEEEECSTTTTSC---TTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEE
T ss_pred --------C--------------CCeEEEEcchhhccc---cCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcC
Confidence 0 015778899887643 247999999873222 2456789999999999999
Q ss_pred cEEEEe
Q 015160 328 GVWINL 333 (412)
Q Consensus 328 G~wIN~ 333 (412)
|+++-.
T Consensus 334 G~l~iv 339 (381)
T 3dmg_A 334 GVFFLV 339 (381)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 999864
No 139
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.29 E-value=5.4e-11 Score=115.67 Aligned_cols=143 Identities=14% Similarity=0.094 Sum_probs=98.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++-.+.. .
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~---~----------------------------- 215 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLD---T----------------------------- 215 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH---T-----------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhh---c-----------------------------
Confidence 4579999999999999999986 568999999 9998766622210 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEEecCcchh-----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWINLGPLLYH----- 339 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh----- 339 (412)
....++.+..+||.+-. | ..||+|+....+..- +...+.|++++++|||||+++-..+..-.
T Consensus 216 ------~~~~~v~~~~~d~~~~~--p---~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 284 (332)
T 3i53_A 216 ------GLSGRAQVVVGSFFDPL--P---AGAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHAGT 284 (332)
T ss_dssp ------TCTTTEEEEECCTTSCC--C---CSCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---CCH
T ss_pred ------CcCcCeEEecCCCCCCC--C---CCCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCccH
Confidence 11234889999997422 2 279999987755432 33689999999999999999853222110
Q ss_pred hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 340 FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 340 ~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
..+..-......-+.+.+|++++++++||++++...
T Consensus 285 ~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 320 (332)
T 3i53_A 285 GMDLRMLTYFGGKERSLAELGELAAQAGLAVRAAHP 320 (332)
T ss_dssp HHHHHHHHHHSCCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHhhCCCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 000000000012367999999999999999988653
No 140
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.28 E-value=5.2e-11 Score=115.49 Aligned_cols=140 Identities=14% Similarity=0.051 Sum_probs=97.8
Q ss_pred CeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 191 PACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
.+|||+|||+|.++..|+++ +..++|+|+ ..|+..++-.+...
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~---------------------------------- 213 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL---------------------------------- 213 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH----------------------------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc----------------------------------
Confidence 79999999999999999988 678999999 99987665222100
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcch-------h
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLY-------H 339 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLly-------h 339 (412)
....++.+..+|+.+. . .+.||+|+....+. ..+.....++.++++|||||++|-..+..- .
T Consensus 214 ----~~~~~v~~~~~d~~~~-~----~~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~ 284 (334)
T 2ip2_A 214 ----LAGERVSLVGGDMLQE-V----PSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMS 284 (334)
T ss_dssp ----HHTTSEEEEESCTTTC-C----CSSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHH
T ss_pred ----CCCCcEEEecCCCCCC-C----CCCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchh
Confidence 0012478999999872 2 25799999877654 344566999999999999999885422210 0
Q ss_pred -hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 340 -FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 340 -~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
..+..-.......+.+.+|++++++++||++++..
T Consensus 285 ~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 285 VLWDVHLFMACAGRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp HHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred HHhhhHhHhhCCCcCCCHHHHHHHHHHCCCceeEEE
Confidence 00000000000235799999999999999998765
No 141
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.28 E-value=4e-11 Score=117.49 Aligned_cols=143 Identities=20% Similarity=0.185 Sum_probs=97.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|++++ ..++++|+ ..|+..++-.+...
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-------------------------------- 229 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-------------------------------- 229 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT--------------------------------
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc--------------------------------
Confidence 56799999999999999999985 57889999 88987666222100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhhHHHHHHHHHHhccCCcEEEEecCc-ch-----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHNIVEYIEIISRILKDGGVWINLGPL-LY----- 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~Ni~~yl~~I~~~LKPGG~wIN~GPL-ly----- 338 (412)
....++.+..+|+.+.. | ..||+|+....+.. .++..+.++.++++|||||++|-..+. +-
T Consensus 230 ------~~~~~v~~~~~d~~~~~--~---~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~ 298 (360)
T 1tw3_A 230 ------GLSDRVDVVEGDFFEPL--P---RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFN 298 (360)
T ss_dssp ------TCTTTEEEEECCTTSCC--S---SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCS
T ss_pred ------CCCCceEEEeCCCCCCC--C---CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCc
Confidence 01124789999988632 2 34999988765533 234468999999999999988854333 10
Q ss_pred hhh---hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 339 HFA---DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 339 h~~---~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
.+. +..-.......+.+.+|++++++++||++++...
T Consensus 299 ~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 299 EQFTELDLRMLVFLGGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp HHHHHHHHHHHHHHSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred chhhhccHHHhhhcCCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 000 0000000002357999999999999999988653
No 142
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.28 E-value=1.7e-10 Score=126.95 Aligned_cols=149 Identities=13% Similarity=0.139 Sum_probs=101.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..||++| ..|+|+|+|..|+..|+..++..... ..
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnA-----------------kr--------- 774 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNK-----------------EA--------- 774 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTT-----------------TC---------
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccch-----------------hh---------
Confidence 46799999999999999999998 89999999999998876433211000 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcc-hh--h
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLL-YH--F 340 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKPGG~wIN~GPLl-yh--~ 340 (412)
....++.+.+||+.++.. ..++||+|++...|....+ ...+++.++++|||| ++|-..|.. |. |
T Consensus 775 -------~gl~nVefiqGDa~dLp~---~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF 843 (950)
T 3htx_A 775 -------CNVKSATLYDGSILEFDS---RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTIL 843 (950)
T ss_dssp -------SSCSEEEEEESCTTSCCT---TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHH
T ss_pred -------cCCCceEEEECchHhCCc---ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhh
Confidence 001248899999988643 3689999998865554333 457999999999999 444322221 10 1
Q ss_pred hh-----------c--cC--CCCCcccCCCHHHHHH----HHHhCCCEEEEEe
Q 015160 341 AD-----------L--YG--QEDEMSIELSLEDVKR----VALHYGFEFEKEK 374 (412)
Q Consensus 341 ~~-----------~--~g--~~~~~~ieLS~EEL~~----ll~~~GFeii~e~ 374 (412)
.. . .+ ..+...++++.+|++. ++.+.||++....
T Consensus 844 ~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvG 896 (950)
T 3htx_A 844 QRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSG 896 (950)
T ss_dssp TCC------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhcccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEEEEEc
Confidence 10 0 00 0112356789999988 7788899887654
No 143
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.28 E-value=2.7e-11 Score=113.89 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=78.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++-.+...
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~------------------------------- 111 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA------------------------------- 111 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 889999999999998776332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 334 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~G 334 (412)
....++.+..||+.+........++||+|+... ...+...|++.+.++|||||++|--.
T Consensus 112 -------g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 112 -------GVDQRVTLREGPALQSLESLGECPAFDLIFIDA---DKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp -------TCTTTEEEEESCHHHHHHTCCSCCCCSEEEECS---CGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred -------CCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECC---chHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 111347889999877432111235899997633 24567789999999999999998533
No 144
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.27 E-value=2.5e-11 Score=109.36 Aligned_cols=109 Identities=16% Similarity=0.119 Sum_probs=80.3
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.++..+.+.+.. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+...
T Consensus 64 ~~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 122 (210)
T 3lbf_A 64 YMVARMTELLEL---TPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNL------------------ 122 (210)
T ss_dssp HHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHHhcCC---CCCCEEEEEcCCCCHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc------------------
Confidence 355555555542 25679999999999999999999999999999999998776332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
+ ..++.+..+|+.+... ..++||+|+....+.... +.+.++|||||++|-
T Consensus 123 --------~-------------~~~v~~~~~d~~~~~~---~~~~~D~i~~~~~~~~~~------~~~~~~L~pgG~lv~ 172 (210)
T 3lbf_A 123 --------D-------------LHNVSTRHGDGWQGWQ---ARAPFDAIIVTAAPPEIP------TALMTQLDEGGILVL 172 (210)
T ss_dssp --------T-------------CCSEEEEESCGGGCCG---GGCCEEEEEESSBCSSCC------THHHHTEEEEEEEEE
T ss_pred --------C-------------CCceEEEECCcccCCc---cCCCccEEEEccchhhhh------HHHHHhcccCcEEEE
Confidence 0 0137889999887543 257899999876544332 258899999999985
No 145
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.26 E-value=9.7e-12 Score=109.21 Aligned_cols=103 Identities=18% Similarity=0.082 Sum_probs=74.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 77 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMT--------------------------------- 77 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTT---------------------------------
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 456999999999999999999985 8999999999998776322100
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHH--HhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIIS--RILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~--~~LKPGG~wIN 332 (412)
....++.+..+|+.+... ...+.||+|++..-.. .....+.++.+. ++|||||+++-
T Consensus 78 -----~~~~~~~~~~~d~~~~~~--~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 78 -----KAENRFTLLKMEAERAID--CLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp -----TCGGGEEEECSCHHHHHH--HBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CCCCceEEEECcHHHhHH--hhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEE
Confidence 011247889999887422 1236799998753111 134556777776 99999999984
No 146
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.26 E-value=6.4e-12 Score=117.28 Aligned_cols=155 Identities=14% Similarity=0.080 Sum_probs=105.8
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccc
Q 015160 163 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEW 240 (412)
Q Consensus 163 G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~ 240 (412)
...||-.+|.++-+.+..+++ +..+|||+|||+|-+|..++.. +..++|+|+|..|+.+++-.+...
T Consensus 28 STReRLp~ld~fY~~~~~~l~-----~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~------ 96 (200)
T 3fzg_A 28 STNERVATLNDFYTYVFGNIK-----HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL------ 96 (200)
T ss_dssp HHHTTGGGHHHHHHHHHHHSC-----CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS------
T ss_pred CHHHHhHhHHHHHHHHHhhcC-----CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 356777888888888888875 4569999999999999999888 779999999999998887443210
Q ss_pred cccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHH
Q 015160 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEII 320 (412)
Q Consensus 241 ~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I 320 (412)
....++.+ +|..+.. ..+.||+|+..-.|...++....+..|
T Consensus 97 --------------------------------g~~~~v~~--~d~~~~~----~~~~~DvVLa~k~LHlL~~~~~al~~v 138 (200)
T 3fzg_A 97 --------------------------------KTTIKYRF--LNKESDV----YKGTYDVVFLLKMLPVLKQQDVNILDF 138 (200)
T ss_dssp --------------------------------CCSSEEEE--ECCHHHH----TTSEEEEEEEETCHHHHHHTTCCHHHH
T ss_pred --------------------------------CCCccEEE--ecccccC----CCCCcChhhHhhHHHhhhhhHHHHHHH
Confidence 00112444 5655432 257899999886666555666778899
Q ss_pred HHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHH-HHHHHHhCCCEEEEEe
Q 015160 321 SRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLED-VKRVALHYGFEFEKEK 374 (412)
Q Consensus 321 ~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EE-L~~ll~~~GFeii~e~ 374 (412)
++.|||||++|++. .....|..+ .++=...+ .++.+ .-.+.++.+.
T Consensus 139 ~~~L~pggvfISfp-----tksl~Gr~~--gm~~~Y~~~~~~~~-~~~~~~~~~~ 185 (200)
T 3fzg_A 139 LQLFHTQNFVISFP-----IKSLSGKEK--GMEENYQLWFESFT-KGWIKILDSK 185 (200)
T ss_dssp HHTCEEEEEEEEEE-----CCCCC--CT--TCCCCHHHHHHHHT-TTTSCEEEEE
T ss_pred HHHhCCCCEEEEeC-----hHHhcCCCc--chhhhHHHHHHHhc-cCcceeeeee
Confidence 99999999999863 111112222 34444444 44444 4556666544
No 147
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.26 E-value=1.1e-10 Score=107.48 Aligned_cols=136 Identities=15% Similarity=0.073 Sum_probs=94.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
|+..+..+...+.. .++.+|||+|||+|.++..+++++..|+|+|+|..|+..++..+...
T Consensus 76 ~~~~~~~~~~~~~~---~~~~~vldiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 136 (248)
T 2yvl_A 76 YPKDSFYIALKLNL---NKEKRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLKKF---------------- 136 (248)
T ss_dssp CHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHHHHHHHT----------------
T ss_pred cchhHHHHHHhcCC---CCCCEEEEeCCCccHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHc----------------
Confidence 34444555555532 25679999999999999999999999999999999998776332100
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~w 330 (412)
....++.+..+|+.+... ..+.||+|+.. .++...+++.+.++|||||++
T Consensus 137 ----------------------~~~~~~~~~~~d~~~~~~---~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l 186 (248)
T 2yvl_A 137 ----------------------NLGKNVKFFNVDFKDAEV---PEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPV 186 (248)
T ss_dssp ----------------------TCCTTEEEECSCTTTSCC---CTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEE
T ss_pred ----------------------CCCCcEEEEEcChhhccc---CCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEE
Confidence 001236778889887541 14689999863 234567899999999999999
Q ss_pred EEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 331 INLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 331 IN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
+-..|.. -..+++..++.+. |..++
T Consensus 187 ~~~~~~~----------------~~~~~~~~~l~~~-f~~~~ 211 (248)
T 2yvl_A 187 GFLLPTA----------------NQVIKLLESIENY-FGNLE 211 (248)
T ss_dssp EEEESSH----------------HHHHHHHHHSTTT-EEEEE
T ss_pred EEEeCCH----------------HHHHHHHHHHHhh-CCcce
Confidence 8644321 1234566666665 87655
No 148
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.26 E-value=7.9e-11 Score=112.92 Aligned_cols=155 Identities=8% Similarity=-0.019 Sum_probs=93.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeC-CHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEF-SYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~-S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
++++|...... .++.+|||+|||+|.++..+++.|. .|+|+|+ |..|+..++..... +
T Consensus 67 l~~~l~~~~~~---~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~----N------------- 126 (281)
T 3bzb_A 67 LADTLCWQPEL---IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIRE----H------------- 126 (281)
T ss_dssp HHHHHHHCGGG---TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHT----T-------------
T ss_pred HHHHHHhcchh---cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHH----h-------------
Confidence 45555554321 1456999999999999999999998 8999999 89999877632210 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEeccccc----ccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhcc--
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE----VYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILK-- 325 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~e----ly~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LK-- 325 (412)
.. ... .+..+ ...++.+...|..+ +... ...++||+|+....+-..+++..+++++.++||
T Consensus 127 ~~-~~~---~~~~~--------~~~~v~~~~~~~~~~~~~~~~~-~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~ 193 (281)
T 3bzb_A 127 TA-NSC---SSETV--------KRASPKVVPYRWGDSPDSLQRC-TGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALP 193 (281)
T ss_dssp CC----------------------CCCEEEECCTTSCTHHHHHH-HSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCT
T ss_pred hh-hhc---ccccC--------CCCCeEEEEecCCCccHHHHhh-ccCCCCCEEEEeCcccChHHHHHHHHHHHHHhccc
Confidence 00 000 00000 00124555333222 1100 013689999986655556678899999999999
Q ss_pred -C--CcEEEE-ecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCC-CEEEEE
Q 015160 326 -D--GGVWIN-LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYG-FEFEKE 373 (412)
Q Consensus 326 -P--GG~wIN-~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~G-Feii~e 373 (412)
| ||+++- +.|.. + .+.-..+++..++++.| |+++..
T Consensus 194 ~p~~gG~l~v~~~~~~----------~--~~~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 194 ANDPTAVALVTFTHHR----------P--HLAERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp TTCTTCEEEEEECC--------------------CTHHHHHHHHSTTEEEEEE
T ss_pred CCCCCCEEEEEEEeee----------c--ccchhHHHHHHHHHhcCCEEEEEe
Confidence 9 998653 22210 0 11123467777888999 999875
No 149
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.26 E-value=7.2e-12 Score=117.34 Aligned_cols=104 Identities=18% Similarity=0.227 Sum_probs=77.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
+.+.+...++ .++.+|||+|||+|.++..|+++ |..|+|+|+|..|+..++-..
T Consensus 74 ~~~~~~~~~~----~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-------------------- 129 (269)
T 1p91_A 74 IVAQLRERLD----DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-------------------- 129 (269)
T ss_dssp HHHHHHHHSC----TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------------------
T ss_pred HHHHHHHhcC----CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------------------
Confidence 4555555543 14679999999999999999998 889999999999997655110
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
.++.+..+|+.++.. ..++||+|++.+.. ..++.++++|||||+++
T Consensus 130 ------------------------~~~~~~~~d~~~~~~---~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 130 ------------------------PQVTFCVASSHRLPF---SDTSMDAIIRIYAP-------CKAEELARVVKPGGWVI 175 (269)
T ss_dssp ------------------------TTSEEEECCTTSCSB---CTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEE
T ss_pred ------------------------CCcEEEEcchhhCCC---CCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEE
Confidence 014677888776532 35789999975431 34899999999999998
Q ss_pred EecC
Q 015160 332 NLGP 335 (412)
Q Consensus 332 N~GP 335 (412)
-..|
T Consensus 176 ~~~~ 179 (269)
T 1p91_A 176 TATP 179 (269)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6544
No 150
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.25 E-value=1.9e-11 Score=107.30 Aligned_cols=104 Identities=19% Similarity=0.121 Sum_probs=73.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+...
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------------- 90 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAIT--------------------------------- 90 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH---------------------------------
T ss_pred CCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHh---------------------------------
Confidence 456999999999999999999984 8999999999998776332110
Q ss_pred CCCCCCCCCceeEEecccccccC-CCCCCCCccEEEEec-ccCChhhHHHHHHHH--HHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCF-FIDTAHNIVEYIEII--SRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~-~~~~~~~fD~VvT~F-FIDta~Ni~~yl~~I--~~~LKPGG~wIN 332 (412)
....++.++.+|+.+... .+...++||+|++.. |. ..+..+.++.+ .++|||||+++-
T Consensus 91 -----~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~--~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 91 -----KEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA--KQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp -----TCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG--GCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----CCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC--chhHHHHHHHHHHhcccCCCCEEEE
Confidence 001237889999887431 001146899999763 22 12344566666 889999999984
No 151
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.25 E-value=2.4e-11 Score=113.44 Aligned_cols=136 Identities=13% Similarity=0.030 Sum_probs=77.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHHHHHHHhhhhccccccccc--------ccccccccCCCCC--
Q 015160 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYMMICSSFILNHTETAGEWN--------IYPWIHSNCNSLS-- 254 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~--------I~P~i~~~sn~~s-- 254 (412)
++.+|||+|||+|.++..++++ +..|+|+|+|..|+..|+..+...... ... .|-..-..+...+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPA-GLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHH-HHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhc-cccccchhhhhhhhhcccccchhhhh
Confidence 4579999999999999999987 678999999999998887433211000 000 0000000000000
Q ss_pred cccCcc-ccccCCCCCCCCCCCCceeEEecccccccCCC--CCCCCccEEEEec-ccC--C------hhhHHHHHHHHHH
Q 015160 255 DSDQLR-PVSIPDIHPASAGITEGFSMCGGDFVEVYSDP--SQVGAWDAVVTCF-FID--T------AHNIVEYIEIISR 322 (412)
Q Consensus 255 ~~~qlr-~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~--~~~~~fD~VvT~F-FID--t------a~Ni~~yl~~I~~ 322 (412)
...+++ .++... ......+..+|+.+..... ...++||+|++.. |+. . ......+++.+++
T Consensus 130 ~~~~v~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~ 202 (250)
T 1o9g_A 130 AARRLRERLTAEG-------GALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLAS 202 (250)
T ss_dssp HHHHHHHHHHHTT-------SSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHH
T ss_pred hhhhhhhhccccc-------cccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHH
Confidence 000000 000000 0000238899988743100 0134899999873 222 1 3556789999999
Q ss_pred hccCCcEEEE
Q 015160 323 ILKDGGVWIN 332 (412)
Q Consensus 323 ~LKPGG~wIN 332 (412)
+|||||+++-
T Consensus 203 ~LkpgG~l~~ 212 (250)
T 1o9g_A 203 ALPAHAVIAV 212 (250)
T ss_dssp HSCTTCEEEE
T ss_pred hcCCCcEEEE
Confidence 9999999984
No 152
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.25 E-value=2.1e-11 Score=123.35 Aligned_cols=118 Identities=19% Similarity=0.190 Sum_probs=88.3
Q ss_pred hHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhccccccccccc
Q 015160 165 TERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIY 243 (412)
Q Consensus 165 ~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~ 243 (412)
..|..+|..-|..-...+ ++..|||+|||+|-|+...|+.|. .|+|+|.|. |+..|+.+... +
T Consensus 65 ~~Rt~aY~~Ai~~~~~~~------~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~----n----- 128 (376)
T 4hc4_A 65 RVRTDAYRLGILRNWAAL------RGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRF----N----- 128 (376)
T ss_dssp HHHHHHHHHHHHTTHHHH------TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHH----T-----
T ss_pred HHHHHHHHHHHHhCHHhc------CCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHH----c-----
Confidence 456777775553322233 456899999999999999999997 699999995 88777654321 1
Q ss_pred ccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHHHH
Q 015160 244 PWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIEII 320 (412)
Q Consensus 244 P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yl~~I 320 (412)
...+++.++.||+.++.. .++||+||+- +++.....+..++...
T Consensus 129 -----------------------------~~~~~i~~i~~~~~~~~l----pe~~DvivsE~~~~~l~~e~~l~~~l~a~ 175 (376)
T 4hc4_A 129 -----------------------------GLEDRVHVLPGPVETVEL----PEQVDAIVSEWMGYGLLHESMLSSVLHAR 175 (376)
T ss_dssp -----------------------------TCTTTEEEEESCTTTCCC----SSCEEEEECCCCBTTBTTTCSHHHHHHHH
T ss_pred -----------------------------CCCceEEEEeeeeeeecC----CccccEEEeecccccccccchhhhHHHHH
Confidence 112348899999988754 3789999984 4566666688899999
Q ss_pred HHhccCCcEEE
Q 015160 321 SRILKDGGVWI 331 (412)
Q Consensus 321 ~~~LKPGG~wI 331 (412)
.++|||||++|
T Consensus 176 ~r~Lkp~G~~i 186 (376)
T 4hc4_A 176 TKWLKEGGLLL 186 (376)
T ss_dssp HHHEEEEEEEE
T ss_pred HhhCCCCceEC
Confidence 99999999998
No 153
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.25 E-value=2.9e-11 Score=119.59 Aligned_cols=100 Identities=18% Similarity=0.161 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|. .|+|+|+|. |+..++..+.. +
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~----~----------------------------- 95 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKS----N----------------------------- 95 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHH----T-----------------------------
T ss_pred CcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHH----c-----------------------------
Confidence 467999999999999999999987 899999995 87665533211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc--cCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
....++.++.+|+.++.. .++||+|++... .-..+++.+.+..+.++|||||++|
T Consensus 96 -----~l~~~v~~~~~d~~~~~~----~~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 96 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEEcchhhCCC----CCceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEE
Confidence 011247889999988642 368999998632 2233457788889999999999998
No 154
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.25 E-value=2e-10 Score=108.91 Aligned_cols=133 Identities=14% Similarity=0.035 Sum_probs=90.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++..+... . + .
T Consensus 36 ~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~--~-------------~-----~--------- 86 (260)
T 2ozv_A 36 RACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELP--D-------------N-----A--------- 86 (260)
T ss_dssp SCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSG--G-------------G-----T---------
T ss_pred CCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhh--h-------------h-----C---------
Confidence 45699999999999999999995 68999999999998776221100 0 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccC----CCCCCCCccEEEEe--cccC----------------ChhhHHHHHHHHHHhc
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYS----DPSQVGAWDAVVTC--FFID----------------TAHNIVEYIEIISRIL 324 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~----~~~~~~~fD~VvT~--FFID----------------ta~Ni~~yl~~I~~~L 324 (412)
...+++.++.+|+.++.. .+...++||+|++. |+.. ...++.++++.+.++|
T Consensus 87 ------~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~L 160 (260)
T 2ozv_A 87 ------AFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIM 160 (260)
T ss_dssp ------TTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHE
T ss_pred ------CCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHc
Confidence 011247889999988621 00124789999987 4432 1123678999999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 325 KPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
||||+++-+-| + -..+++..++.+. |...+..
T Consensus 161 kpgG~l~~~~~------------~-----~~~~~~~~~l~~~-~~~~~i~ 192 (260)
T 2ozv_A 161 VSGGQLSLISR------------P-----QSVAEIIAACGSR-FGGLEIT 192 (260)
T ss_dssp EEEEEEEEEEC------------G-----GGHHHHHHHHTTT-EEEEEEE
T ss_pred CCCCEEEEEEc------------H-----HHHHHHHHHHHhc-CCceEEE
Confidence 99999985211 0 1346788888764 7766544
No 155
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.25 E-value=4.8e-11 Score=108.70 Aligned_cols=107 Identities=13% Similarity=0.036 Sum_probs=78.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. |..|+|+|+|..|+..++..+...
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 106 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA------------------------------- 106 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 889999999999998776332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCC-C-CCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSD-P-SQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPL 336 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~-~-~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPL 336 (412)
...+++.+..||+.+.... + ...+.||+|+.... ..+...+++.+.++|||||++|--.++
T Consensus 107 -------~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 107 -------NLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDAD---KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCC---cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 0112478899998764220 0 01157999975322 345779999999999999999865443
No 156
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.24 E-value=2.7e-11 Score=124.60 Aligned_cols=113 Identities=12% Similarity=0.148 Sum_probs=80.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCe-EEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~-V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|+++..+|+. |.. |+|+|+|..|+..|+-......+.... .++.
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~-------------------~Gl~--- 230 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKW-------------------YGKK--- 230 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH-------------------HTBC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHH-------------------hCCC---
Confidence 6779999999999999999964 775 999999999998887443211100000 0000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEe
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINL 333 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~ 333 (412)
..++.++.|||.++.. +..-..||+|+...++- .+++.+.|..+++.|||||.+|..
T Consensus 231 --------~~rVefi~GD~~~lp~-~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 231 --------HAEYTLERGDFLSEEW-RERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp --------CCEEEEEECCTTSHHH-HHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTTCEEEES
T ss_pred --------CCCeEEEECcccCCcc-ccccCCccEEEEccccc-CchHHHHHHHHHHcCCCCcEEEEe
Confidence 1248999999998642 10014799998754332 357888999999999999999964
No 157
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.23 E-value=3.7e-11 Score=109.38 Aligned_cols=101 Identities=15% Similarity=0.003 Sum_probs=73.6
Q ss_pred CCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
+.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+... .
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~--------------------------~------- 101 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATL--------------------------K------- 101 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------T-------
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-------
Confidence 46899999999999999999986 8999999999998776322100 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHH--hccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR--ILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~--~LKPGG~wIN 332 (412)
. .++.++.+|+.++.. ...++||+|+...-.. ..+..+.++.+.+ +|||||+++-
T Consensus 102 -----~-~~v~~~~~D~~~~~~--~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 102 -----A-GNARVVNSNAMSFLA--QKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp -----C-CSEEEECSCHHHHHS--SCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -----C-CcEEEEECCHHHHHh--hcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEE
Confidence 0 237889999887432 1246899998753211 2345677888865 5999999974
No 158
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.23 E-value=3.4e-11 Score=109.65 Aligned_cols=113 Identities=13% Similarity=0.087 Sum_probs=81.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
++..+.... ++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++..+...
T Consensus 55 ~l~~l~~~~------~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~---------------- 112 (225)
T 3tr6_A 55 LLALLVKLM------QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA---------------- 112 (225)
T ss_dssp HHHHHHHHH------TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC----------------
Confidence 555554433 3469999999999999999998 889999999999998776433210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCC-C--CCCCCccEEEEecccCChhhHHHHHHHHHHhccCC
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD-P--SQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG 327 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~-~--~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPG 327 (412)
...+++.+..+|+.+.... + ...++||+|+... ...+...+++.+.++||||
T Consensus 113 ----------------------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~---~~~~~~~~l~~~~~~L~pg 167 (225)
T 3tr6_A 113 ----------------------GLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDA---DKANTDLYYEESLKLLREG 167 (225)
T ss_dssp ----------------------TCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEE
T ss_pred ----------------------CCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECC---CHHHHHHHHHHHHHhcCCC
Confidence 0112378899998765320 0 0117899997322 2456788999999999999
Q ss_pred cEEEEe
Q 015160 328 GVWINL 333 (412)
Q Consensus 328 G~wIN~ 333 (412)
|++|--
T Consensus 168 G~lv~~ 173 (225)
T 3tr6_A 168 GLIAVD 173 (225)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 999853
No 159
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.22 E-value=4.1e-10 Score=106.86 Aligned_cols=177 Identities=16% Similarity=0.023 Sum_probs=102.0
Q ss_pred HhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhh
Q 015160 156 VRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILN 232 (412)
Q Consensus 156 ~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn 232 (412)
+|.|..- |. .+-..|...+.....+++.+|||+|||+|.++..||++ .-.|+|+|+|..|+... ++
T Consensus 51 yr~w~~~----~s----kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l---~~ 119 (232)
T 3id6_C 51 YREWNAF----RS----KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVREL---LL 119 (232)
T ss_dssp EEECCTT----TC----HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHH---HH
T ss_pred hhhhchH----HH----HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHH---HH
Confidence 7778643 22 13344444443222347789999999999999999986 24899999999996321 11
Q ss_pred cccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh
Q 015160 233 HTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN 312 (412)
Q Consensus 233 ~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N 312 (412)
.+.+. .++.++.+|++.........+.||+|++..-. ++
T Consensus 120 ~a~~r--------------------------------------~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~ 158 (232)
T 3id6_C 120 VAQRR--------------------------------------PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PD 158 (232)
T ss_dssp HHHHC--------------------------------------TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TT
T ss_pred Hhhhc--------------------------------------CCeEEEEcccccchhhhccccceEEEEecCCC---hh
Confidence 11110 12667888887642111124689999875432 33
Q ss_pred HHH-HHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccc
Q 015160 313 IVE-YIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNR 391 (412)
Q Consensus 313 i~~-yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~ 391 (412)
..+ .++.+.++|||||.++-. .++-.-+....+ -+...+ ....+++.||++++... ..+|..
T Consensus 159 ~~~il~~~~~~~LkpGG~lvis---ik~~~~d~t~~~---~e~~~~-~~~~L~~~gf~~~~~~~-l~p~~~--------- 221 (232)
T 3id6_C 159 QTDIAIYNAKFFLKVNGDMLLV---IKARSIDVTKDP---KEIYKT-EVEKLENSNFETIQIIN-LDPYDK--------- 221 (232)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE---EC-------CCS---SSSTTH-HHHHHHHTTEEEEEEEE-CTTTCS---------
T ss_pred HHHHHHHHHHHhCCCCeEEEEE---EccCCcccCCCH---HHHHHH-HHHHHHHCCCEEEEEec-cCCCcC---------
Confidence 344 345666699999999853 111110001111 123334 44556677999987653 234433
Q ss_pred cceEEEEEEEc
Q 015160 392 YFTAFWTMRKK 402 (412)
Q Consensus 392 Y~~~f~VarK~ 402 (412)
.-.++|++|+
T Consensus 222 -~h~~v~~~~~ 231 (232)
T 3id6_C 222 -DHAIVLSKYK 231 (232)
T ss_dssp -SCEEEEEEEC
T ss_pred -ceEEEEEEeC
Confidence 3456677764
No 160
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.22 E-value=2.4e-11 Score=113.28 Aligned_cols=148 Identities=11% Similarity=0.060 Sum_probs=87.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+..+...
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-------------------------------- 112 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-------------------------------- 112 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4569999999999999999987 789999999999998777332110
Q ss_pred CCCCCCCCCCceeEEecccccc-cC-CCCC-CCCccEEEEe--cccCC--h-----hh------HHHHHHHHHHhccCCc
Q 015160 267 IHPASAGITEGFSMCGGDFVEV-YS-DPSQ-VGAWDAVVTC--FFIDT--A-----HN------IVEYIEIISRILKDGG 328 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~el-y~-~~~~-~~~fD~VvT~--FFIDt--a-----~N------i~~yl~~I~~~LKPGG 328 (412)
...+++.++.+|+.+. .. .+.. .++||+|++. |+-.. . .+ ....+..++++|||||
T Consensus 113 ------~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG 186 (254)
T 2h00_A 113 ------NLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGG 186 (254)
T ss_dssp ------TCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHT
T ss_pred ------CCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCC
Confidence 0112378888987652 21 1111 2589999987 33211 0 11 1245678899999999
Q ss_pred EEEEecCcch---hhhhccCC-CCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 329 VWINLGPLLY---HFADLYGQ-EDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 329 ~wIN~GPLly---h~~~~~g~-~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+.-+-+++- .+-...|. .......-+.+++.+++++.||+.++..
T Consensus 187 ~l~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 187 ELEFVKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp HHHHHHHHHHHHHHHGGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEHHHHHHHHhcccceEEEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 8753211110 00000010 0001122345899999999999877644
No 161
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.22 E-value=6.6e-11 Score=108.15 Aligned_cols=109 Identities=19% Similarity=0.081 Sum_probs=81.0
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
.+.+++.+.+.+... ++.+|||+|||+|.++..|++.|..|+|+|+|..|+..++..+..
T Consensus 55 ~~~~~~~~~~~~~~~---~~~~vLdiG~G~G~~~~~l~~~~~~v~~vD~~~~~~~~a~~~~~~----------------- 114 (231)
T 1vbf_A 55 ALNLGIFMLDELDLH---KGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASKLLSY----------------- 114 (231)
T ss_dssp CHHHHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCHHHHHHHHHHHTT-----------------
T ss_pred CHHHHHHHHHhcCCC---CCCEEEEEcCCCCHHHHHHHHHcCEEEEEeCCHHHHHHHHHHHhh-----------------
Confidence 445666666665422 567999999999999999999999999999999999766622210
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~w 330 (412)
.. ++.+..+|+.+... ..++||+|++...+.... +.+.++|||||++
T Consensus 115 -----------------------~~-~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l 161 (231)
T 1vbf_A 115 -----------------------YN-NIKLILGDGTLGYE---EEKPYDRVVVWATAPTLL------CKPYEQLKEGGIM 161 (231)
T ss_dssp -----------------------CS-SEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEE
T ss_pred -----------------------cC-CeEEEECCcccccc---cCCCccEEEECCcHHHHH------HHHHHHcCCCcEE
Confidence 00 36788899877322 247899999876555332 4688999999999
Q ss_pred EE
Q 015160 331 IN 332 (412)
Q Consensus 331 IN 332 (412)
|-
T Consensus 162 ~~ 163 (231)
T 1vbf_A 162 IL 163 (231)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 162
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.22 E-value=4.6e-11 Score=111.16 Aligned_cols=121 Identities=12% Similarity=0.105 Sum_probs=86.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.++..|....+. +++.+|||+|||+|..+..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 43 ~~l~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------- 104 (221)
T 3dr5_A 43 QLLTTLAATTNG---NGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA--------------- 104 (221)
T ss_dssp HHHHHHHHHSCC---TTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhhCC---CCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 466666665432 13459999999999999999985 689999999999998776332210
Q ss_pred CCCCCcccCccccccCCCCCCCCCCC-CceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGIT-EGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~-~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
... .++.+..||+.++... ...++||+|+... ...+..+|++.+.++|||||
T Consensus 105 -----------------------g~~~~~i~~~~gda~~~l~~-~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 105 -----------------------GYSPSRVRFLLSRPLDVMSR-LANDSYQLVFGQV---SPMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp -----------------------TCCGGGEEEECSCHHHHGGG-SCTTCEEEEEECC---CTTTHHHHHHHHHHHEEEEE
T ss_pred -----------------------CCCcCcEEEEEcCHHHHHHH-hcCCCcCeEEEcC---cHHHHHHHHHHHHHHcCCCc
Confidence 111 3488999998886421 1147899996432 23457789999999999999
Q ss_pred EEEEecCcchh
Q 015160 329 VWINLGPLLYH 339 (412)
Q Consensus 329 ~wIN~GPLlyh 339 (412)
++|- ..++|+
T Consensus 158 ~lv~-dn~~~~ 167 (221)
T 3dr5_A 158 ALVL-ADALLD 167 (221)
T ss_dssp EEEE-TTTTGG
T ss_pred EEEE-eCCCCC
Confidence 9994 334453
No 163
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.22 E-value=2.1e-10 Score=114.15 Aligned_cols=145 Identities=17% Similarity=0.211 Sum_probs=98.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
...+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++ +
T Consensus 191 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-------~---------------- 244 (368)
T 3reo_A 191 MKKILEMYNGF--EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAP-------A---------------- 244 (368)
T ss_dssp HHHHHTTCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------C----------------
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhh-------h----------------
Confidence 34444545421 25679999999999999999996 568999999 87862111 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~w 330 (412)
..++.+..|||.+- . | .+ |+|+..+.+. ..++..+.|++++++|||||++
T Consensus 245 ----------------------~~~v~~~~~d~~~~-~-p--~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l 296 (368)
T 3reo_A 245 ----------------------FSGVEHLGGDMFDG-V-P--KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKV 296 (368)
T ss_dssp ----------------------CTTEEEEECCTTTC-C-C--CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEE
T ss_pred ----------------------cCCCEEEecCCCCC-C-C--CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEE
Confidence 02378999999872 2 2 23 9998877665 4556778999999999999998
Q ss_pred EEecCcchh------------hhh--ccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 331 INLGPLLYH------------FAD--LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 331 IN~GPLlyh------------~~~--~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
|-...++-. ..+ ..... ....+.+.+|++++++++||++++..
T Consensus 297 ~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~g~~rt~~e~~~ll~~AGF~~v~~~ 353 (368)
T 3reo_A 297 IVAEYILPPSPDPSIATKVVIHTDALMLAYN-PGGKERTEKEFQALAMASGFRGFKVA 353 (368)
T ss_dssp EEEECCCCSSCCCCHHHHHHHHHHHHHHHHS-SBCCCCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccCCCCCCchhhhHHHhhhHHHHhhc-CCCccCCHHHHHHHHHHCCCeeeEEE
Confidence 743221100 000 00000 01346799999999999999998755
No 164
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.22 E-value=3.7e-10 Score=101.49 Aligned_cols=121 Identities=18% Similarity=0.078 Sum_probs=87.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..++++|. .|+|+|+|..|+..++..+.. . +
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~---~-----------------------~------ 96 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGE---F-----------------------K------ 96 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGG---G-----------------------T------
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHH---c-----------------------C------
Confidence 567999999999999999999987 599999999999766622110 0 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
.++.++.+|+.++ . ++||+|++. |+.........+++.+.++| ||+++.. ..
T Consensus 97 --------~~~~~~~~d~~~~-~-----~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~------~~---- 150 (207)
T 1wy7_A 97 --------GKFKVFIGDVSEF-N-----SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH------LA---- 150 (207)
T ss_dssp --------TSEEEEESCGGGC-C-----CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE------EC----
T ss_pred --------CCEEEEECchHHc-C-----CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE------eC----
Confidence 0367899998875 1 489999986 33333344568899999999 7777642 00
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
-.-+.+.+.+++.+.||++...
T Consensus 151 ------~~~~~~~~~~~l~~~g~~~~~~ 172 (207)
T 1wy7_A 151 ------KPEVRRFIEKFSWEHGFVVTHR 172 (207)
T ss_dssp ------CHHHHHHHHHHHHHTTEEEEEE
T ss_pred ------CcCCHHHHHHHHHHCCCeEEEE
Confidence 0123466778888999988763
No 165
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.21 E-value=3e-11 Score=112.18 Aligned_cols=104 Identities=20% Similarity=0.149 Sum_probs=74.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+|||+|||+|.++..||+++ ..|+|+|+|..|+..++-... +.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~---~~----------------------------- 81 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAH---EE----------------------------- 81 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHH---HT-----------------------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHH---Hh-----------------------------
Confidence 45699999999999999999984 579999999999976652211 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC---hhhH------HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT---AHNI------VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt---a~Ni------~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|+.++.......++||.|+..| -+. .... ..+++.++++|||||+++-
T Consensus 82 -------~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~-~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i 148 (218)
T 3dxy_A 82 -------GLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF-PDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHM 148 (218)
T ss_dssp -------TCSSEEEECSCHHHHHHHHSCTTCEEEEEEES-CCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCcEEEEECCHHHHHHHHcCCCChheEEEeC-CCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEE
Confidence 01237889999888521001258999998664 222 1111 2599999999999999974
No 166
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.21 E-value=6.6e-10 Score=110.09 Aligned_cols=139 Identities=19% Similarity=0.103 Sum_probs=96.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
...+|||+|||+|.++..|+++. -.++..|+ +.|+..++..+..
T Consensus 179 ~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~--------------------------------- 224 (353)
T 4a6d_A 179 VFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF--------------------------------- 224 (353)
T ss_dssp GCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC---------------------------------
T ss_pred cCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---------------------------------
Confidence 45689999999999999999994 46677777 6787655522100
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEEEEecCcch------
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVWINLGPLLY------ 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~wIN~GPLly------ 338 (412)
...+++++..|||++.. ...+|+|+....|+ ..++..+.|+++++.|||||.+|-+-+++-
T Consensus 225 ------~~~~rv~~~~gD~~~~~-----~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~ 293 (353)
T 4a6d_A 225 ------QEEEQIDFQEGDFFKDP-----LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGP 293 (353)
T ss_dssp --------CCSEEEEESCTTTSC-----CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCC
T ss_pred ------cccCceeeecCccccCC-----CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCC
Confidence 11245899999998632 23579998877664 334567899999999999999885432211
Q ss_pred ---hhhhc--cCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 339 ---HFADL--YGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 339 ---h~~~~--~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.+-+. .-.. ..-+.|.+|++++++++||++++..
T Consensus 294 ~~~~~~dl~ml~~~--~g~ert~~e~~~ll~~AGf~~v~v~ 332 (353)
T 4a6d_A 294 LLTQLYSLNMLVQT--EGQERTPTHYHMLLSSAGFRDFQFK 332 (353)
T ss_dssp HHHHHHHHHHHHSS--SCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHhC--CCcCCCHHHHHHHHHHCCCceEEEE
Confidence 11010 0000 1346799999999999999998765
No 167
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.19 E-value=3.3e-10 Score=112.66 Aligned_cols=145 Identities=16% Similarity=0.205 Sum_probs=99.2
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
...+.+.++.. .+..+|||+|||+|.++..|+++ +..++++|+ +.|+..++ +
T Consensus 189 ~~~~~~~~~~~--~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~-------~---------------- 242 (364)
T 3p9c_A 189 TKKLLELYHGF--EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAP-------Q---------------- 242 (364)
T ss_dssp HHHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------C----------------
T ss_pred HHHHHHhcccc--cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhh-------h----------------
Confidence 34444555422 25679999999999999999986 568999999 77762111 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhHHHHHHHHHHhccCCcEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNIVEYIEIISRILKDGGVW 330 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni~~yl~~I~~~LKPGG~w 330 (412)
..++.+..|||.+ .. | .+ |+|+..+.+. ..++....|++++++|||||++
T Consensus 243 ----------------------~~~v~~~~~D~~~-~~-p--~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l 294 (364)
T 3p9c_A 243 ----------------------FPGVTHVGGDMFK-EV-P--SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKV 294 (364)
T ss_dssp ----------------------CTTEEEEECCTTT-CC-C--CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEE
T ss_pred ----------------------cCCeEEEeCCcCC-CC-C--CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEE
Confidence 0237899999987 22 2 23 9999877665 4466789999999999999999
Q ss_pred EEecCcc---------hh---hhh--ccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 331 INLGPLL---------YH---FAD--LYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 331 IN~GPLl---------yh---~~~--~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+-...++ +. ..+ ... ......+.+.+|++++++++||++++..
T Consensus 295 ~i~e~~~~~~~~~~~~~~~~~~~d~~m~~-~~~~g~~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 295 VLVQCILPVNPEANPSSQGVFHVDMIMLA-HNPGGRERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp EEEECCBCSSCCSSHHHHHHHHHHHHHHH-HCSSCCCCBHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeccCCCCCcchhhhhHHHhHHHHHh-cccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 7432211 00 000 000 0001346799999999999999998855
No 168
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.19 E-value=2.8e-10 Score=103.59 Aligned_cols=152 Identities=14% Similarity=0.028 Sum_probs=95.2
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
.+++.++++ ... +++.+|||+|||+|.++..+|+++..|+|+|+|..+.
T Consensus 12 KL~ei~~~~-~~~--~~g~~VLDlG~G~G~~s~~la~~~~~V~gvD~~~~~~---------------------------- 60 (191)
T 3dou_A 12 KLEFLLDRY-RVV--RKGDAVIEIGSSPGGWTQVLNSLARKIISIDLQEMEE---------------------------- 60 (191)
T ss_dssp HHHHHHHHH-CCS--CTTCEEEEESCTTCHHHHHHTTTCSEEEEEESSCCCC----------------------------
T ss_pred HHHHHHHHc-CCC--CCCCEEEEEeecCCHHHHHHHHcCCcEEEEecccccc----------------------------
Confidence 355555543 211 2567999999999999999999999999999996210
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCC-----CC---CCCccEEEEecccCC-----------hhhH
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP-----SQ---VGAWDAVVTCFFIDT-----------AHNI 313 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~-----~~---~~~fD~VvT~FFIDt-----------a~Ni 313 (412)
+ .++.+++||+++..... .. .++||+|++....++ ...+
T Consensus 61 -----------~-----------~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~ 118 (191)
T 3dou_A 61 -----------I-----------AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIG 118 (191)
T ss_dssp -----------C-----------TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHH
T ss_pred -----------C-----------CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHH
Confidence 0 12678899988742100 00 148999998532211 1123
Q ss_pred HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccc
Q 015160 314 VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYF 393 (412)
Q Consensus 314 ~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~ 393 (412)
...++.+.++|||||.+|-. .| . .-...++...++. .|+-++.....++-. ...
T Consensus 119 ~~~l~~a~~~LkpGG~lv~k---~~--~-----------~~~~~~~~~~l~~-~F~~v~~~kP~asR~---------~s~ 172 (191)
T 3dou_A 119 QRVMEIAVRYLRNGGNVLLK---QF--Q-----------GDMTNDFIAIWRK-NFSSYKISKPPASRG---------SSS 172 (191)
T ss_dssp HHHHHHHHHHEEEEEEEEEE---EE--C-----------STHHHHHHHHHGG-GEEEEEEECC---------------CC
T ss_pred HHHHHHHHHHccCCCEEEEE---Ec--C-----------CCCHHHHHHHHHH-hcCEEEEECCCCccC---------CCc
Confidence 46788889999999999841 11 1 0124677777755 588776543222221 235
Q ss_pred eEEEEEEEcC
Q 015160 394 TAFWTMRKKS 403 (412)
Q Consensus 394 ~~f~VarK~~ 403 (412)
-.|+||++..
T Consensus 173 E~y~v~~~~~ 182 (191)
T 3dou_A 173 EIYIMFFGFK 182 (191)
T ss_dssp EEEEEEEEEC
T ss_pred eEEEEEeeec
Confidence 6888998763
No 169
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.17 E-value=3.3e-10 Score=111.34 Aligned_cols=138 Identities=11% Similarity=0.123 Sum_probs=92.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|+++. ..++++|++. |+. + . ... .
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~-~~~--~-----~-~~~----------------------~----- 227 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAE-VVA--R-----H-RLD----------------------A----- 227 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHH-HHT--T-----C-CCC----------------------C-----
T ss_pred CCceEEEECCccCHHHHHHHHHCCCCEEEEecCHH-Hhh--c-----c-ccc----------------------c-----
Confidence 56799999999999999999964 5688999954 432 1 0 000 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEEEecCcchh-----
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWINLGPLLYH----- 339 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKPGG~wIN~GPLlyh----- 339 (412)
.....++.+..+||.+. . . .||+|+....+....+ ....|++++++|||||++|-..+..-.
T Consensus 228 -----~~~~~~v~~~~~d~~~~--~---p-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~ 296 (348)
T 3lst_A 228 -----PDVAGRWKVVEGDFLRE--V---P-HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAH 296 (348)
T ss_dssp -----GGGTTSEEEEECCTTTC--C---C-CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCC
T ss_pred -----cCCCCCeEEEecCCCCC--C---C-CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcc
Confidence 01123589999999732 1 2 8999998876654333 479999999999999999853221100
Q ss_pred ---hhhc--cCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 340 ---FADL--YGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 340 ---~~~~--~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
+.+. ... ....+.+.+|++++++++||++++...
T Consensus 297 ~~~~~d~~~~~~--~~~~~~t~~e~~~ll~~aGf~~~~~~~ 335 (348)
T 3lst_A 297 QSKEMDFMMLAA--RTGQERTAAELEPLFTAAGLRLDRVVG 335 (348)
T ss_dssp HHHHHHHHHHHT--TSCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhhcChhhhhc--CCCcCCCHHHHHHHHHHCCCceEEEEE
Confidence 0000 000 012367999999999999999987653
No 170
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.17 E-value=4.8e-10 Score=112.10 Aligned_cols=141 Identities=13% Similarity=0.220 Sum_probs=97.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||||||+|.++.++|+.|. .|+|+|+|..|+..|+..+...
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-------------------------------- 264 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-------------------------------- 264 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc--------------------------------
Confidence 456899999999999999999998 8999999999998777332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--c--cC---ChhhH-HHHHHHHHHhccCCcEEEEecCcch
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--F--ID---TAHNI-VEYIEIISRILKDGGVWINLGPLLY 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F--F--ID---ta~Ni-~~yl~~I~~~LKPGG~wIN~GPLly 338 (412)
....++.+..+|+.++.. ..++||+|++.. - +. ...++ .++++.+.++| +|+.++-
T Consensus 265 ------gl~~~i~~~~~D~~~~~~---~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i------ 328 (373)
T 3tm4_A 265 ------GVLDKIKFIQGDATQLSQ---YVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI------ 328 (373)
T ss_dssp ------TCGGGCEEEECCGGGGGG---TCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE------
T ss_pred ------CCCCceEEEECChhhCCc---ccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE------
Confidence 011247889999998753 247899999863 2 21 22333 56788899988 3333331
Q ss_pred hhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 015160 339 HFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 339 h~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
.-+.+.+++++.+.||++.+...+ ..+.-.|.+++.+.+
T Consensus 329 --------------~~~~~~~~~~~~~~G~~~~~~~~~-----------~nG~l~~~~~~~~~~ 367 (373)
T 3tm4_A 329 --------------TTEKKAIEEAIAENGFEIIHHRVI-----------GHGGLMVHLYVVKLE 367 (373)
T ss_dssp --------------ESCHHHHHHHHHHTTEEEEEEEEE-----------EETTEEEEEEEEEET
T ss_pred --------------ECCHHHHHHHHHHcCCEEEEEEEE-----------EcCCEEEEEEeccCc
Confidence 125677888999999999876532 223335666665544
No 171
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.17 E-value=8.4e-11 Score=106.55 Aligned_cols=100 Identities=18% Similarity=0.189 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. |..|+|+|+|..|+..++-.+...
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 104 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN------------------------------- 104 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-------------------------------
Confidence 3468999999999999999988 789999999999998776332110
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.+..+|+.++.. ...+ ||+|+...- ..+...+++.+.++|||||++|-
T Consensus 105 -------~~~~~v~~~~~d~~~~~~--~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~ 158 (210)
T 3c3p_A 105 -------GLIDRVELQVGDPLGIAA--GQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIA 158 (210)
T ss_dssp -------SGGGGEEEEESCHHHHHT--TCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEE
T ss_pred -------CCCceEEEEEecHHHHhc--cCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEE
Confidence 001237889999877532 1235 999976532 34577899999999999999985
No 172
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.17 E-value=5.2e-10 Score=106.33 Aligned_cols=135 Identities=13% Similarity=0.168 Sum_probs=101.0
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
|+.|.++++ ++.+|||+|||+|.++..||++|. .|+|+|+|..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~----~-------------- 68 (230)
T 3lec_A 12 LQKVANYVP-----KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE----H-------------- 68 (230)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666665 457999999999999999999985 599999999999887732211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
...+++.+..||..+... ..+.||+|+.+--. +.-+.+.++.....|+++|.+|-
T Consensus 69 --------------------gl~~~I~~~~gD~l~~~~---~~~~~D~IviaGmG--g~lI~~IL~~~~~~l~~~~~lIl 123 (230)
T 3lec_A 69 --------------------GLTSKIDVRLANGLSAFE---EADNIDTITICGMG--GRLIADILNNDIDKLQHVKTLVL 123 (230)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCCcEEEEECchhhccc---cccccCEEEEeCCc--hHHHHHHHHHHHHHhCcCCEEEE
Confidence 112348899999887643 12479998754322 23477889999999999999984
Q ss_pred ecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEee
Q 015160 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKT 375 (412)
Q Consensus 333 ~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~ 375 (412)
- | ....++|++.+.+.||+++.|..
T Consensus 124 q-p-----------------~~~~~~lr~~L~~~Gf~i~~E~l 148 (230)
T 3lec_A 124 Q-P-----------------NNREDDLRKWLAANDFEIVAEDI 148 (230)
T ss_dssp E-E-----------------SSCHHHHHHHHHHTTEEEEEEEE
T ss_pred E-C-----------------CCChHHHHHHHHHCCCEEEEEEE
Confidence 1 1 13488999999999999999873
No 173
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.17 E-value=3.1e-11 Score=116.92 Aligned_cols=100 Identities=11% Similarity=-0.018 Sum_probs=68.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+|++ ..|+|+|+|+ |+..++ +. +. +.
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-~~V~gVD~s~-m~~~a~-------~~-----------------------~~--~~-- 125 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-PNVREVKAYT-LGTSGH-------EK-----------------------PR--LV-- 125 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-TTEEEEEEEC-CCCTTS-------CC-----------------------CC--CC--
T ss_pred CCCEEEEeccCCCHHHHHHHHc-CCEEEEECch-hhhhhh-------hc-----------------------hh--hh--
Confidence 5679999999999999999999 6899999998 742110 00 00 00
Q ss_pred CCCCCCCCceeEE--ecccccccCCCCCCCCccEEEEecc-cCChh--h---HHHHHHHHHHhccCCc--EEEE
Q 015160 269 PASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFF-IDTAH--N---IVEYIEIISRILKDGG--VWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~--~GDF~ely~~~~~~~~fD~VvT~FF-IDta~--N---i~~yl~~I~~~LKPGG--~wIN 332 (412)
.....++.++ .+|+.++. .++||+|++.+- +.... + ....|+.+.++||||| .||-
T Consensus 126 ---~~~~~~v~~~~~~~D~~~l~-----~~~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 126 ---ETFGWNLITFKSKVDVTKME-----PFQADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp ---CCTTGGGEEEECSCCGGGCC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred ---hhcCCCeEEEeccCcHhhCC-----CCCcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 0011247788 99998753 378999998642 21111 1 1137899999999999 8874
No 174
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.17 E-value=6.7e-10 Score=105.16 Aligned_cols=134 Identities=14% Similarity=0.087 Sum_probs=99.4
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
|+.|.++++ ++.+|||+|||+|.++..+|+.|- .|+|+|++..++..|+--+.. +
T Consensus 6 L~~l~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 62 (225)
T 3kr9_A 6 LELVASFVS-----QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA----H-------------- 62 (225)
T ss_dssp HHHHHTTSC-----TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666665 456999999999999999999985 699999999999877732211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
...+++.+..+|.++... ..+.||+|+.+-- -..-+.+.|+.....|+|||++|-
T Consensus 63 --------------------gl~~~i~~~~~d~l~~l~---~~~~~D~IviaG~--Gg~~i~~Il~~~~~~L~~~~~lVl 117 (225)
T 3kr9_A 63 --------------------GLKEKIQVRLANGLAAFE---ETDQVSVITIAGM--GGRLIARILEEGLGKLANVERLIL 117 (225)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEE--CHHHHHHHHHHTGGGCTTCCEEEE
T ss_pred --------------------CCCceEEEEECchhhhcc---cCcCCCEEEEcCC--ChHHHHHHHHHHHHHhCCCCEEEE
Confidence 111247889999876432 1236999886532 223367889999999999999984
Q ss_pred ecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 333 ~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-| . ...+.+++.+.+.||+++.|.
T Consensus 118 -q~----------------~-~~~~~vr~~L~~~Gf~i~~e~ 141 (225)
T 3kr9_A 118 -QP----------------N-NREDDLRIWLQDHGFQIVAES 141 (225)
T ss_dssp -EE----------------S-SCHHHHHHHHHHTTEEEEEEE
T ss_pred -EC----------------C-CCHHHHHHHHHHCCCEEEEEE
Confidence 11 1 367899999999999999986
No 175
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.17 E-value=4.1e-10 Score=111.50 Aligned_cols=133 Identities=13% Similarity=0.010 Sum_probs=91.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+.. + .
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga~V~~VD~s~~al~~a~~n~~~----~----------------------g------- 199 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGAEVTHVDASKKAIGWAKENQVL----A----------------------G------- 199 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH----H----------------------T-------
T ss_pred CCCcEEEcccccCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c----------------------C-------
Confidence 456999999999999999999999999999999999877632210 0 0
Q ss_pred CCCCCCCC-ceeEEecccccccCC-CCCCCCccEEEEe---cccC-------ChhhHHHHHHHHHHhccCCcEEEE-ecC
Q 015160 269 PASAGITE-GFSMCGGDFVEVYSD-PSQVGAWDAVVTC---FFID-------TAHNIVEYIEIISRILKDGGVWIN-LGP 335 (412)
Q Consensus 269 p~~~~~~~-~~s~~~GDF~ely~~-~~~~~~fD~VvT~---FFID-------ta~Ni~~yl~~I~~~LKPGG~wIN-~GP 335 (412)
..+ ++.++.+|+.++... ....++||+|+.. |-.. ...+..++++.+.++|||||+++- ...
T Consensus 200 -----l~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 200 -----LEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp -----CTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred -----CCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 011 267889998875320 0013689999884 2221 234567889999999999999653 111
Q ss_pred cchhhhhccCCCCCcccCCCHHHHHHHHH----hCCCEEEEEe
Q 015160 336 LLYHFADLYGQEDEMSIELSLEDVKRVAL----HYGFEFEKEK 374 (412)
Q Consensus 336 Llyh~~~~~g~~~~~~ieLS~EEL~~ll~----~~GFeii~e~ 374 (412)
...++.+++..++. +.|+++....
T Consensus 275 ---------------~~~~~~~~~~~~l~~a~~~~g~~v~~~e 302 (332)
T 2igt_A 275 ---------------SIRASFYSMHELMRETMRGAGGVVASGE 302 (332)
T ss_dssp ---------------CTTSCHHHHHHHHHHHTTTSCSEEEEEE
T ss_pred ---------------CCCCCHHHHHHHHHHHHHHcCCeEEEEE
Confidence 12345555555555 7899987543
No 176
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.16 E-value=6e-11 Score=111.51 Aligned_cols=109 Identities=16% Similarity=0.129 Sum_probs=75.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||++ +..|+|+|+|..|+..|+-.+....... .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~-----------------~---------- 98 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAP-----------------A---------- 98 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHST-----------------T----------
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHH-----------------h----------
Confidence 4568999999999999999998 5789999999999987763322110000 0
Q ss_pred CCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCChh----h-----HHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTAH----N-----IVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~e-ly~~~~~~~~fD~VvT~FFIDta~----N-----i~~yl~~I~~~LKPGG~wIN 332 (412)
....++.++.+|+.+ +.. ....++||.|+.+| -|.-. . ...+|+.++++|||||+++-
T Consensus 99 ------~~~~nv~~~~~d~~~~l~~-~~~~~~~D~v~~~~-~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~ 166 (235)
T 3ckk_A 99 ------GGFQNIACLRSNAMKHLPN-FFYKGQLTKMFFLF-PDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYT 166 (235)
T ss_dssp ------CCCTTEEEEECCTTTCHHH-HCCTTCEEEEEEES-CC-----------CCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------cCCCeEEEEECcHHHhhhh-hCCCcCeeEEEEeC-CCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEE
Confidence 001247899999886 320 01257899997654 33210 0 13799999999999999984
No 177
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.16 E-value=1.7e-10 Score=104.33 Aligned_cols=110 Identities=18% Similarity=0.091 Sum_probs=79.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC---CeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG---FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G---f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
+.++..+.+.+.. .++.+|||+|||+|.++..|++.+ ..|+|+|+|..|+..++-.+...
T Consensus 63 ~~~~~~~~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------- 125 (215)
T 2yxe_A 63 IHMVGMMCELLDL---KPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL-------------- 125 (215)
T ss_dssp HHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH--------------
T ss_pred HHHHHHHHHhhCC---CCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc--------------
Confidence 3455555555532 256799999999999999999987 79999999999997766332110
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
. ..++.+..+|+.+... ..++||+|+....+.... +.+.++|||||
T Consensus 126 ------------~-------------~~~v~~~~~d~~~~~~---~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG 171 (215)
T 2yxe_A 126 ------------G-------------YDNVIVIVGDGTLGYE---PLAPYDRIYTTAAGPKIP------EPLIRQLKDGG 171 (215)
T ss_dssp ------------T-------------CTTEEEEESCGGGCCG---GGCCEEEEEESSBBSSCC------HHHHHTEEEEE
T ss_pred ------------C-------------CCCeEEEECCcccCCC---CCCCeeEEEECCchHHHH------HHHHHHcCCCc
Confidence 0 0126778888755322 246899999887655433 48899999999
Q ss_pred EEEE
Q 015160 329 VWIN 332 (412)
Q Consensus 329 ~wIN 332 (412)
++|-
T Consensus 172 ~lv~ 175 (215)
T 2yxe_A 172 KLLM 175 (215)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9985
No 178
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.15 E-value=6.8e-11 Score=116.44 Aligned_cols=114 Identities=15% Similarity=0.084 Sum_probs=82.5
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCN 251 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn 251 (412)
....|.+.++.. .+.+|||+|||+|.++..++++| ..|+|+|+|..|+..++-.+.. +
T Consensus 184 ~~~~ll~~l~~~---~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~----~------------- 243 (343)
T 2pjd_A 184 GSQLLLSTLTPH---TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA----N------------- 243 (343)
T ss_dssp HHHHHHHHSCTT---CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH----T-------------
T ss_pred HHHHHHHhcCcC---CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----h-------------
Confidence 345555555322 34689999999999999999998 5899999999999877632210 0
Q ss_pred CCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC-----ChhhHHHHHHHHHHhccC
Q 015160 252 SLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID-----TAHNIVEYIEIISRILKD 326 (412)
Q Consensus 252 ~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID-----ta~Ni~~yl~~I~~~LKP 326 (412)
.+ ...+..+|+.+.. .++||+|++..-+. ...+..++++.++++|||
T Consensus 244 ---------~~--------------~~~~~~~d~~~~~-----~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~Lkp 295 (343)
T 2pjd_A 244 ---------GV--------------EGEVFASNVFSEV-----KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNS 295 (343)
T ss_dssp ---------TC--------------CCEEEECSTTTTC-----CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEE
T ss_pred ---------CC--------------CCEEEEccccccc-----cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCC
Confidence 00 1345778887632 47899999875333 345578899999999999
Q ss_pred CcEEEEecC
Q 015160 327 GGVWINLGP 335 (412)
Q Consensus 327 GG~wIN~GP 335 (412)
||+++-..+
T Consensus 296 gG~l~i~~~ 304 (343)
T 2pjd_A 296 GGELRIVAN 304 (343)
T ss_dssp EEEEEEEEE
T ss_pred CcEEEEEEc
Confidence 999986443
No 179
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.15 E-value=1.9e-10 Score=113.06 Aligned_cols=133 Identities=16% Similarity=0.137 Sum_probs=93.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+..+|||+|||+|.++..|+++ +..++|+|+ ..|+..++ . .
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------------------------~--~-- 230 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLS--------------------------------G--S-- 230 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC--------------------------------C--B--
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcc--------------------------------c--C--
Confidence 4569999999999999999987 678999999 88873111 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccC---CcEEEEecCcch---
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKD---GGVWINLGPLLY--- 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKP---GG~wIN~GPLly--- 338 (412)
.++.+..+||.+ .. | .||+|+..+.+....+ ..+.|+.++++||| ||++|-..+..-
T Consensus 231 ---------~~v~~~~~d~~~-~~-p----~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 295 (352)
T 1fp2_A 231 ---------NNLTYVGGDMFT-SI-P----NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKK 295 (352)
T ss_dssp ---------TTEEEEECCTTT-CC-C----CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTT
T ss_pred ---------CCcEEEeccccC-CC-C----CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCC
Confidence 127889999976 22 2 3999998876654433 44999999999999 999874322110
Q ss_pred ------hh---hhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 339 ------HF---ADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 339 ------h~---~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.. .+..-... ...+.+.+|++++++++||++++..
T Consensus 296 ~~~~~~~~~~~~d~~~~~~-~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 296 DENQVTQIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp SCHHHHHHHHHHHHHGGGG-TCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred CccchhhhHhhccHHHHhc-cCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 00 00000000 0235789999999999999988754
No 180
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.15 E-value=1.1e-10 Score=120.28 Aligned_cols=128 Identities=15% Similarity=0.149 Sum_probs=84.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
..++..+.+.+... ++.+|||+|||+|+++..||++ |. .|+|+|+|..|+..|.-++..+.+...
T Consensus 228 p~~v~~ml~~l~l~---~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~---------- 294 (433)
T 1u2z_A 228 PNFLSDVYQQCQLK---KGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCK---------- 294 (433)
T ss_dssp HHHHHHHHHHTTCC---TTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHhcCCC---CCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHH----------
Confidence 45666666665422 5679999999999999999996 64 699999999999887433332211100
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecc-cccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCc
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGD-FVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GD-F~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
..++. ..++.+..|| +.+....+...+.||+|+...++ ..+++.+.|+.+.++|||||
T Consensus 295 ---------~~Gl~-----------~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG 353 (433)
T 1u2z_A 295 ---------LYGMR-----------LNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGC 353 (433)
T ss_dssp ---------HTTBC-----------CCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTC
T ss_pred ---------HcCCC-----------CCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCe
Confidence 00000 1246777764 43210000013689999976544 23678899999999999999
Q ss_pred EEEEe
Q 015160 329 VWINL 333 (412)
Q Consensus 329 ~wIN~ 333 (412)
.+|..
T Consensus 354 ~lVi~ 358 (433)
T 1u2z_A 354 KIISL 358 (433)
T ss_dssp EEEES
T ss_pred EEEEe
Confidence 99964
No 181
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.14 E-value=1.7e-10 Score=114.44 Aligned_cols=145 Identities=16% Similarity=0.135 Sum_probs=96.5
Q ss_pred HHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 176 EELDALFPNRSKESPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 176 ~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
..+.+.++.. .+..+|||+|||+|+++..|++++ ..++++|+ ..|+..++
T Consensus 198 ~~l~~~~~~~--~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~------------------------- 249 (372)
T 1fp1_D 198 KRMLEIYTGF--EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAP------------------------- 249 (372)
T ss_dssp HHHHHHCCTT--TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCC-------------------------
T ss_pred HHHHHHhhcc--CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhh-------------------------
Confidence 4444455421 245799999999999999999986 46778899 88863111
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccCCcEEE
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKPGG~wI 331 (412)
. . .++.+..+||.+ .. | . ||+|+....|....+ ....|+.++++|||||++|
T Consensus 250 -------~--~-----------~~v~~~~~d~~~-~~-~---~-~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 250 -------P--L-----------SGIEHVGGDMFA-SV-P---Q-GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp -------C--C-----------TTEEEEECCTTT-CC-C---C-EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------h--c-----------CCCEEEeCCccc-CC-C---C-CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 0 0 127889999987 22 2 2 999998876654433 4499999999999999998
Q ss_pred EecCcc----h-------h-hhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 332 NLGPLL----Y-------H-FADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 332 N~GPLl----y-------h-~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-..+.. . . ..+..-.......+.+.+|++++++++||++++..
T Consensus 304 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~ll~~aGf~~~~~~ 358 (372)
T 1fp1_D 304 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVA 358 (372)
T ss_dssp EEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCSEEEEE
T ss_pred EEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 431110 0 0 00000000000235699999999999999998755
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=1.2e-10 Score=107.05 Aligned_cols=103 Identities=13% Similarity=0.154 Sum_probs=77.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..||+. |..|+|+|+|..|+..++-.+...
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-------------------------------- 101 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL-------------------------------- 101 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT--------------------------------
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------------
Confidence 4569999999999999999998 689999999999998776332110
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.+..+|+.+........+.||+|+...-.. +...+++.+.++|||||++|-
T Consensus 102 ------~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~ 158 (233)
T 2gpy_A 102 ------GLESRIELLFGDALQLGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILS 158 (233)
T ss_dssp ------TCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEE
T ss_pred ------CCCCcEEEEECCHHHHHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEE
Confidence 011237788899877421000136899998765443 577999999999999999985
No 183
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.13 E-value=1.1e-10 Score=109.79 Aligned_cols=140 Identities=16% Similarity=0.083 Sum_probs=96.4
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i 246 (412)
.|...+..+...+.. .++.+|||+|||+|.++..|+++ +..|+|+|+|..|+..++..+.... .
T Consensus 83 ~~~~~~~~i~~~~~~---~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--g-------- 149 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDI---FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY--G-------- 149 (280)
T ss_dssp CCHHHHHHHHHHTTC---CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH--T--------
T ss_pred ecHHHHHHHHHHcCC---CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc--C--------
Confidence 566666766666542 25679999999999999999996 6899999999999977663221000 0
Q ss_pred cccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 015160 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 247 ~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
....++.+..+|+.+... ..+.||+|+... .+..++++.+.++|||
T Consensus 150 --------------------------~~~~~v~~~~~d~~~~~~---~~~~~D~v~~~~-----~~~~~~l~~~~~~L~p 195 (280)
T 1i9g_A 150 --------------------------QPPDNWRLVVSDLADSEL---PDGSVDRAVLDM-----LAPWEVLDAVSRLLVA 195 (280)
T ss_dssp --------------------------SCCTTEEEECSCGGGCCC---CTTCEEEEEEES-----SCGGGGHHHHHHHEEE
T ss_pred --------------------------CCCCcEEEEECchHhcCC---CCCceeEEEECC-----cCHHHHHHHHHHhCCC
Confidence 001237788899887632 247899998732 2445789999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHh-CCCEEEE
Q 015160 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEK 372 (412)
Q Consensus 327 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~-~GFeii~ 372 (412)
||+++-..|..- ...++...+.+ .||..++
T Consensus 196 gG~l~~~~~~~~----------------~~~~~~~~l~~~~~f~~~~ 226 (280)
T 1i9g_A 196 GGVLMVYVATVT----------------QLSRIVEALRAKQCWTEPR 226 (280)
T ss_dssp EEEEEEEESSHH----------------HHHHHHHHHHHHSSBCCCE
T ss_pred CCEEEEEeCCHH----------------HHHHHHHHHHhcCCcCCcE
Confidence 999986544210 12345555555 7887655
No 184
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.13 E-value=1.1e-10 Score=121.08 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=75.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|+.|. .|+|+|+|. |+..|+..+.. +
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~----~----------------------------- 203 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKS----N----------------------------- 203 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHH----T-----------------------------
T ss_pred CCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHH----c-----------------------------
Confidence 457999999999999999999986 899999998 98766533211 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--ccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
....++.++.+|+.++.. .++||+|++.. +....++..+.+..++++|||||++|
T Consensus 204 -----gl~~~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 204 -----NLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp -----TCTTTEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEE
T ss_pred -----CCCCcEEEEECchhhCcc----CCCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEE
Confidence 011347899999988532 36899999853 33333456778888999999999998
No 185
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.12 E-value=2.8e-10 Score=114.42 Aligned_cols=117 Identities=12% Similarity=-0.009 Sum_probs=82.2
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
...|.+.++.. ++.+|||+|||+|.++..++++ |..|+|+|+|..|+..++..+.. +
T Consensus 211 ~~~ll~~l~~~---~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~----n-------------- 269 (375)
T 4dcm_A 211 ARFFMQHLPEN---LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVET----N-------------- 269 (375)
T ss_dssp HHHHHHTCCCS---CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH----H--------------
T ss_pred HHHHHHhCccc---CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHH----c--------------
Confidence 34455555533 4579999999999999999999 68999999999999877633211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC----C-hhhHHHHHHHHHHhccCC
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID----T-AHNIVEYIEIISRILKDG 327 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID----t-a~Ni~~yl~~I~~~LKPG 327 (412)
++ ++ ..++.+..+|+.+.. ..++||+|++..-+. . .....++|+.++++||||
T Consensus 270 --------gl--~~--------~~~v~~~~~D~~~~~----~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~Lkpg 327 (375)
T 4dcm_A 270 --------MP--EA--------LDRCEFMINNALSGV----EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKIN 327 (375)
T ss_dssp --------CG--GG--------GGGEEEEECSTTTTC----CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEE
T ss_pred --------CC--Cc--------CceEEEEechhhccC----CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCC
Confidence 00 00 013678999988743 257899999863211 1 122447899999999999
Q ss_pred cEEEEec
Q 015160 328 GVWINLG 334 (412)
Q Consensus 328 G~wIN~G 334 (412)
|+++-++
T Consensus 328 G~l~iv~ 334 (375)
T 4dcm_A 328 GELYIVA 334 (375)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9998644
No 186
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.12 E-value=1e-09 Score=98.38 Aligned_cols=113 Identities=14% Similarity=0.068 Sum_probs=80.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+++.|. .|+|+|+|..|+..++..+.
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~----------------------------------- 95 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG----------------------------------- 95 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----------------------------------
T ss_pred CCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----------------------------------
Confidence 457999999999999999999998 59999999999976652110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--ccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYG 345 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g 345 (412)
++.++.+|+.++ + ++||+|++.- +.-......++++.+.++| |++++...|
T Consensus 96 ---------~~~~~~~d~~~~---~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~~~---------- 148 (200)
T 1ne2_A 96 ---------GVNFMVADVSEI---S---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIGNA---------- 148 (200)
T ss_dssp ---------TSEEEECCGGGC---C---CCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEEEG----------
T ss_pred ---------CCEEEECcHHHC---C---CCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEEcC----------
Confidence 257888998874 1 6899999863 2211122357899999999 666654211
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
-+.+.+.+++...| ++..
T Consensus 149 --------~~~~~~~~~~~~~g-~~~~ 166 (200)
T 1ne2_A 149 --------KARDFLRREFSARG-DVFR 166 (200)
T ss_dssp --------GGHHHHHHHHHHHE-EEEE
T ss_pred --------chHHHHHHHHHHCC-CEEE
Confidence 12456788888888 6655
No 187
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.12 E-value=2.5e-10 Score=101.86 Aligned_cols=46 Identities=13% Similarity=-0.080 Sum_probs=35.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (412)
.+++.++++ .-. +++.+|||+|||+|.++..|+++ +..|+|+|+|.
T Consensus 9 kl~~~~~~~-~~~--~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 9 KLIELDNKY-LFL--KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp HHHHHHHHH-CCC--CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred HHHHHHHHc-CCC--CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 455555543 211 14579999999999999999987 47899999998
No 188
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.12 E-value=2e-10 Score=108.43 Aligned_cols=112 Identities=15% Similarity=0.113 Sum_probs=81.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
++..|.... +..+|||+|||+|..+..||+. |..|+|+|+|..|+..++-.+...
T Consensus 70 ll~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---------------- 127 (247)
T 1sui_A 70 FLSMLLKLI------NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA---------------- 127 (247)
T ss_dssp HHHHHHHHT------TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT----------------
T ss_pred HHHHHHHhh------CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc----------------
Confidence 555555543 3459999999999999999987 789999999999998776332110
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CC-C--CCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DP-S--QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~-~~-~--~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
....++.++.||..++.. .. . ..++||+|+.... ..+...|++.+.++|||
T Consensus 128 ----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~Lkp 182 (247)
T 1sui_A 128 ----------------------GVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKV 182 (247)
T ss_dssp ----------------------TCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCT
T ss_pred ----------------------CCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCC
Confidence 011247889999876421 00 0 0378999975422 34678999999999999
Q ss_pred CcEEEE
Q 015160 327 GGVWIN 332 (412)
Q Consensus 327 GG~wIN 332 (412)
||++|-
T Consensus 183 GG~lv~ 188 (247)
T 1sui_A 183 GGVIGY 188 (247)
T ss_dssp TCCEEE
T ss_pred CeEEEE
Confidence 999984
No 189
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.11 E-value=1e-09 Score=105.26 Aligned_cols=134 Identities=14% Similarity=0.063 Sum_probs=99.7
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
++.|.++++ ++.+|||+|||+|.++..||+.|- .|+|+|++..|+..|+--+.. +
T Consensus 12 L~~i~~~v~-----~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~----~-------------- 68 (244)
T 3gnl_A 12 LEKVASYIT-----KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS----S-------------- 68 (244)
T ss_dssp HHHHHTTCC-----SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----T--------------
T ss_pred HHHHHHhCC-----CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----c--------------
Confidence 455666665 457999999999999999999985 699999999999877732211 0
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
...+++.+..||..+... ..+.||+|+.+--. ..-+.+.|+.....|+++|.+|-
T Consensus 69 --------------------gl~~~I~v~~gD~l~~~~---~~~~~D~IviagmG--g~lI~~IL~~~~~~L~~~~~lIl 123 (244)
T 3gnl_A 69 --------------------GLTEQIDVRKGNGLAVIE---KKDAIDTIVIAGMG--GTLIRTILEEGAAKLAGVTKLIL 123 (244)
T ss_dssp --------------------TCTTTEEEEECSGGGGCC---GGGCCCEEEEEEEC--HHHHHHHHHHTGGGGTTCCEEEE
T ss_pred --------------------CCCceEEEEecchhhccC---ccccccEEEEeCCc--hHHHHHHHHHHHHHhCCCCEEEE
Confidence 111247889999887643 12369998864221 23477889999999999999984
Q ss_pred ecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 333 LGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 333 ~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
- | ....+++++.+.+.||.++.|.
T Consensus 124 q-~-----------------~~~~~~lr~~L~~~Gf~i~~E~ 147 (244)
T 3gnl_A 124 Q-P-----------------NIAAWQLREWSEQNNWLITSEA 147 (244)
T ss_dssp E-E-----------------SSCHHHHHHHHHHHTEEEEEEE
T ss_pred E-c-----------------CCChHHHHHHHHHCCCEEEEEE
Confidence 1 1 1357899999999999998876
No 190
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.11 E-value=5.4e-10 Score=103.75 Aligned_cols=103 Identities=17% Similarity=0.115 Sum_probs=75.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..|+-.+...
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 120 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA------------------------------- 120 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3458999999999999999987 679999999999998776332210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-CCCCC--CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYS-DPSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~-~~~~~--~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.+..+|+.+... .+... ++||+|+... ...+...+++.+.++|||||++|-
T Consensus 121 -------g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 121 -------GVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDA---DKRNYPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECS---CGGGHHHHHHHHHHTEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECC---CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 001237788888765321 11112 6899997432 235678999999999999999985
No 191
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.11 E-value=7.3e-11 Score=110.73 Aligned_cols=122 Identities=11% Similarity=0.071 Sum_probs=85.1
Q ss_pred CCeEEEecCCCChhHHHHHHc------CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccc
Q 015160 190 PPACLVPGAGLGRLALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~------Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~ 263 (412)
+.+|||+|||+|..+..||++ +..|+|+|+|..|+..|+ ..
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~--------------------------------~~- 128 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA--------------------------------SD- 128 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG--------------------------------GG-
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh--------------------------------cc-
Confidence 459999999999999999997 789999999999963211 00
Q ss_pred cCCCCCCCCCCCCceeEEecccccc--cCCCCCCCCccEEEEecccCChhhHHHHHHHHHH-hccCCcEEEEecCcchhh
Q 015160 264 IPDIHPASAGITEGFSMCGGDFVEV--YSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISR-ILKDGGVWINLGPLLYHF 340 (412)
Q Consensus 264 iPDv~p~~~~~~~~~s~~~GDF~el--y~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~-~LKPGG~wIN~GPLlyh~ 340 (412)
..++.++.||+.++ ... ....+||+|+.... . .++..+|+.+++ +|||||++|-... ..+
T Consensus 129 -----------~~~v~~~~gD~~~~~~l~~-~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~--~~~ 191 (236)
T 2bm8_A 129 -----------MENITLHQGDCSDLTTFEH-LREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDM--IPY 191 (236)
T ss_dssp -----------CTTEEEEECCSSCSGGGGG-GSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSC--HHH
T ss_pred -----------CCceEEEECcchhHHHHHh-hccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeC--ccc
Confidence 12378899998874 110 01237999875432 1 267889999997 9999999985221 111
Q ss_pred hhccCCCCCcccCCCHHHHHHHHHhC--CCEEE
Q 015160 341 ADLYGQEDEMSIELSLEDVKRVALHY--GFEFE 371 (412)
Q Consensus 341 ~~~~g~~~~~~ieLS~EEL~~ll~~~--GFeii 371 (412)
. .....+++.++++.. +|+++
T Consensus 192 ~----------~~~~~~~~~~~l~~~~~~f~~~ 214 (236)
T 2bm8_A 192 W----------YRYAPQLFSEYLGAFRDVLSMD 214 (236)
T ss_dssp H----------HHHCHHHHHHHHHTTTTTEEEE
T ss_pred c----------cccCHHHHHHHHHhCcccEEEc
Confidence 0 012345888888877 68875
No 192
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.10 E-value=6.3e-11 Score=111.55 Aligned_cols=103 Identities=12% Similarity=0.037 Sum_probs=75.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. |..|+|+|+|..|+..|+-.+...
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~------------------------------- 108 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA------------------------------- 108 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-------------------------------
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 3469999999999999999984 789999999999975444221100
Q ss_pred CCCCCCCCCCCceeEEecccccccCCC-C--CCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDP-S--QVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~-~--~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.++.||+.++.... . ..++||+|+... ...+...|++.+.++|||||++|-
T Consensus 109 -------g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~---~~~~~~~~l~~~~~~LkpGG~lv~ 168 (242)
T 3r3h_A 109 -------KQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDA---DKTNYLNYYELALKLVTPKGLIAI 168 (242)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEES---CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcC---ChHHhHHHHHHHHHhcCCCeEEEE
Confidence 11234889999988753200 0 037899996543 245678899999999999999984
No 193
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.10 E-value=4e-10 Score=108.87 Aligned_cols=101 Identities=12% Similarity=0.266 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..||+. +..|+|+|+|..|+..|+..+...
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~--------------------------------- 169 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERH--------------------------------- 169 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHT---------------------------------
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc---------------------------------
Confidence 3468999999999999999998 889999999999998877332110
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCc---cEEEEec-ccCCh------------------hhHHHHHHHHH-Hhc
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAW---DAVVTCF-FIDTA------------------HNIVEYIEIIS-RIL 324 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~f---D~VvT~F-FIDta------------------~Ni~~yl~~I~-~~L 324 (412)
...+++.++.+|+.+... ++| |+|+++- |+... .+-.++++.|. +.|
T Consensus 170 -----~l~~~v~~~~~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l 239 (284)
T 1nv8_A 170 -----GVSDRFFVRKGEFLEPFK-----EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYD 239 (284)
T ss_dssp -----TCTTSEEEEESSTTGGGG-----GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCC
T ss_pred -----CCCCceEEEECcchhhcc-----cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcC
Confidence 011237899999987432 578 9999872 33211 11237899999 999
Q ss_pred cCCcEEEE
Q 015160 325 KDGGVWIN 332 (412)
Q Consensus 325 KPGG~wIN 332 (412)
||||+++-
T Consensus 240 ~pgG~l~~ 247 (284)
T 1nv8_A 240 TSGKIVLM 247 (284)
T ss_dssp CTTCEEEE
T ss_pred CCCCEEEE
Confidence 99999984
No 194
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.10 E-value=4.6e-10 Score=102.36 Aligned_cols=105 Identities=16% Similarity=0.072 Sum_probs=76.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+. +..|+|+|+|..|+..++-.+...
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 117 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA------------------------------- 117 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-------------------------------
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-------------------------------
Confidence 4569999999999999999986 679999999999998776333210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-CCCC--CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEec
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYS-DPSQ--VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLG 334 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~-~~~~--~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~G 334 (412)
....++.+..+|+.+... .+.. .++||+|+...- ..+...+++.+.++|||||++|-..
T Consensus 118 -------g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 118 -------EAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp -------TCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred -------CCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 011247888999876421 0000 168999976322 3456789999999999999998543
No 195
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.10 E-value=3.5e-10 Score=110.05 Aligned_cols=113 Identities=17% Similarity=0.085 Sum_probs=81.0
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCe---EEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFI---SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~---V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.+++.+.+.+... ++.+|||+|||+|.++..||++|.. |+|+|+|..|+..++..+...
T Consensus 62 ~~~~~l~~~l~~~---~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------- 123 (317)
T 1dl5_A 62 SLMALFMEWVGLD---KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL--------------- 123 (317)
T ss_dssp HHHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhcCCC---CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 3455555555322 5679999999999999999999876 999999999997766322100
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcE
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGV 329 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~ 329 (412)
+ ..++.+..+|+.+... ..++||+|++..-+.... +.+.++|||||+
T Consensus 124 -----------g-------------~~~v~~~~~d~~~~~~---~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 124 -----------G-------------IENVIFVCGDGYYGVP---EFSPYDVIFVTVGVDEVP------ETWFTQLKEGGR 170 (317)
T ss_dssp -----------T-------------CCSEEEEESCGGGCCG---GGCCEEEEEECSBBSCCC------HHHHHHEEEEEE
T ss_pred -----------C-------------CCCeEEEECChhhccc---cCCCeEEEEEcCCHHHHH------HHHHHhcCCCcE
Confidence 0 0126788999887432 247899999886555332 578899999999
Q ss_pred EEE-ecCc
Q 015160 330 WIN-LGPL 336 (412)
Q Consensus 330 wIN-~GPL 336 (412)
++- ++|.
T Consensus 171 lvi~~~~~ 178 (317)
T 1dl5_A 171 VIVPINLK 178 (317)
T ss_dssp EEEEBCBG
T ss_pred EEEEECCC
Confidence 985 4443
No 196
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.09 E-value=1.2e-10 Score=107.84 Aligned_cols=103 Identities=16% Similarity=0.091 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|+++..||+. +..|+|+|+|..|+..++-.+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------------- 108 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN------------------------------- 108 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-------------------------------
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 4569999999999999999998 679999999999998776433210
Q ss_pred CCCCCCCCCCCceeEEecccccccC-C-----------CCCC--CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYS-D-----------PSQV--GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~-~-----------~~~~--~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...+++.+..+|+.+... . .+.. ++||+|+... ..++...+++.+.++|||||++|
T Consensus 109 -------g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~---~~~~~~~~l~~~~~~L~pgG~lv 178 (239)
T 2hnk_A 109 -------GLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDA---DKENYPNYYPLILKLLKPGGLLI 178 (239)
T ss_dssp -------TCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeC---CHHHHHHHHHHHHHHcCCCeEEE
Confidence 001236778888765311 0 0111 6899998653 24567799999999999999998
Q ss_pred E
Q 015160 332 N 332 (412)
Q Consensus 332 N 332 (412)
-
T Consensus 179 ~ 179 (239)
T 2hnk_A 179 A 179 (239)
T ss_dssp E
T ss_pred E
Confidence 5
No 197
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.09 E-value=2.7e-10 Score=106.35 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=75.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..+|++| ..|+|+|+|..|+..++-.+......+. . .
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~---------------~-----~----- 103 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTA---------------S-----K----- 103 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC----------------C-----C-----
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccc---------------c-----c-----
Confidence 45799999999999999999997 4799999999999776633221100000 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh---------HHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN---------IVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N---------i~~yl~~I~~~LKPGG~wIN 332 (412)
....++.++.+|+.+........+.+|.|+.+| -|.... -.++++.+.++|||||+++-
T Consensus 104 ------~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~-p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 104 ------HGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCF-PDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp ------STTTTEEEEECCTTSCGGGTSCTTCEEEEEEES-CCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred ------cCCCcEEEEeccHHHHHHHhccccccCEEEEEC-CCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 001247889999887321112357899998554 222100 04799999999999999985
No 198
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.07 E-value=4.9e-10 Score=104.73 Aligned_cols=113 Identities=13% Similarity=0.105 Sum_probs=81.6
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhccccccccccccccccc
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSN 249 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~ 249 (412)
.++..|.... +..+||++|||+|..+..||+. +..|+++|+|..|+..++-.+...
T Consensus 60 ~~l~~l~~~~------~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~--------------- 118 (237)
T 3c3y_A 60 QLMSFVLKLV------NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA--------------- 118 (237)
T ss_dssp HHHHHHHHHT------TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT---------------
T ss_pred HHHHHHHHhh------CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc---------------
Confidence 3566655543 3469999999999999999987 789999999999998776333210
Q ss_pred CCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccC-CC-C--CCCCccEEEEecccCChhhHHHHHHHHHHhcc
Q 015160 250 CNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DP-S--QVGAWDAVVTCFFIDTAHNIVEYIEIISRILK 325 (412)
Q Consensus 250 sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~-~~-~--~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LK 325 (412)
...+++.+..||..++.. .+ . ..++||+|+... ...+...|++.+.++||
T Consensus 119 -----------------------g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~ 172 (237)
T 3c3y_A 119 -----------------------GVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVK 172 (237)
T ss_dssp -----------------------TCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEE
T ss_pred -----------------------CCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcC
Confidence 011247889999877421 00 0 136899996431 23567899999999999
Q ss_pred CCcEEEE
Q 015160 326 DGGVWIN 332 (412)
Q Consensus 326 PGG~wIN 332 (412)
|||++|-
T Consensus 173 pGG~lv~ 179 (237)
T 3c3y_A 173 VGGIVAY 179 (237)
T ss_dssp EEEEEEE
T ss_pred CCeEEEE
Confidence 9999984
No 199
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.07 E-value=2.4e-10 Score=104.33 Aligned_cols=101 Identities=17% Similarity=0.155 Sum_probs=73.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-------eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccc
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-------~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~ 261 (412)
++.+|||+|||+|.++..|++.+. .|+|+|+|..|+..++..+... .
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~--------------------------~ 133 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD--------------------------K 133 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------C
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------C
Confidence 567999999999999999999865 9999999999998776333210 0
Q ss_pred cccCCCCCCCCCCCCceeEEeccccccc----CCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 262 VSIPDIHPASAGITEGFSMCGGDFVEVY----SDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 262 v~iPDv~p~~~~~~~~~s~~~GDF~ely----~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
+.. ....++.+..+|+.+.. . ..+.||+|+....+.. +++.+.++|||||++|-
T Consensus 134 ~~~--------~~~~~v~~~~~d~~~~~~~~~~---~~~~fD~I~~~~~~~~------~~~~~~~~LkpgG~lv~ 191 (227)
T 2pbf_A 134 PEL--------LKIDNFKIIHKNIYQVNEEEKK---ELGLFDAIHVGASASE------LPEILVDLLAENGKLII 191 (227)
T ss_dssp GGG--------GSSTTEEEEECCGGGCCHHHHH---HHCCEEEEEECSBBSS------CCHHHHHHEEEEEEEEE
T ss_pred ccc--------cccCCEEEEECChHhcccccCc---cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEE
Confidence 000 00123788899988743 2 2468999987655442 35888999999999985
No 200
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.07 E-value=1.6e-10 Score=112.10 Aligned_cols=129 Identities=10% Similarity=0.130 Sum_probs=76.0
Q ss_pred CCCeEEEecCCCCh----hHHHHHHc------CCeEEEEeCCHHHHHHHHhhhhcccccccccccc--cccc-cCCCCCc
Q 015160 189 SPPACLVPGAGLGR----LALEISHL------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYP--WIHS-NCNSLSD 255 (412)
Q Consensus 189 ~~~rVLvPGCGlGR----La~eLA~~------Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P--~i~~-~sn~~s~ 255 (412)
+..+||++|||||. +|..|++. |+.|+|+|+|..||..|+--. .......-.| +... |......
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~---y~~~~~~~~~~~~~~~~f~~~~~~ 181 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI---YRLSELKTLSPQQLQRYFMRGTGP 181 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE---EEGGGGTTSCHHHHHHHEEECCTT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC---CchhhhhcCCHHHHHHHhhccccC
Confidence 45799999999999 66666665 479999999999998877211 0000000000 0000 0000000
Q ss_pred ccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 256 SDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 256 ~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
.+ ....+- + ....++.|.++|+.+... + ..+.||+|++.. |++. +...+.++.++++|||||+++
T Consensus 182 ~~--~~~~v~---~---~lr~~V~F~~~dl~~~~~-~-~~~~fDlI~crnvliyf~~-~~~~~vl~~~~~~L~pgG~L~ 249 (274)
T 1af7_A 182 HE--GLVRVR---Q---ELANYVEFSSVNLLEKQY-N-VPGPFDAIFCRNVMIYFDK-TTQEDILRRFVPLLKPDGLLF 249 (274)
T ss_dssp SC--SEEEEC---H---HHHTTEEEEECCTTCSSC-C-CCCCEEEEEECSSGGGSCH-HHHHHHHHHHGGGEEEEEEEE
T ss_pred CC--Cceeec---h---hhcccCeEEecccCCCCC-C-cCCCeeEEEECCchHhCCH-HHHHHHHHHHHHHhCCCcEEE
Confidence 00 000000 0 011348999999987311 1 146899999864 3443 346789999999999999998
No 201
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.07 E-value=1.9e-10 Score=121.16 Aligned_cols=101 Identities=16% Similarity=0.156 Sum_probs=69.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
.+.||||+|||.|.++..||++|+.|+|+|+|..||.+|+- ++.+.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga~V~giD~~~~~i~~a~~---~a~~~------------------------------- 111 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRA---LAEEN------------------------------- 111 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH---HHHTS-------------------------------
T ss_pred CCCeEEEECCCCcHHHHHHHhCCCEEEEECCCHHHHHHHHH---HHHhc-------------------------------
Confidence 45799999999999999999999999999999999988872 11110
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhH--HHHHHHHHHhccCCcE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNI--VEYIEIISRILKDGGV 329 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni--~~yl~~I~~~LKPGG~ 329 (412)
...++.|..+|..++.. +...++||+|++.=.|...++. ...+..+.+.|+++|.
T Consensus 112 -----~~~~~~~~~~~~~~~~~-~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~ 168 (569)
T 4azs_A 112 -----PDFAAEFRVGRIEEVIA-ALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQ 168 (569)
T ss_dssp -----TTSEEEEEECCHHHHHH-HCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSS
T ss_pred -----CCCceEEEECCHHHHhh-hccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccc
Confidence 01137889999887632 1135789999887544433332 1233345555555544
No 202
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.06 E-value=3.9e-10 Score=109.96 Aligned_cols=108 Identities=15% Similarity=0.171 Sum_probs=73.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++.+|++. .-.|+++|+|..|+..|+--+..... . ..
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~--------------~---------~~---- 135 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA--------------G---------SY---- 135 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS--------------S---------CT----
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc--------------c---------cc----
Confidence 4569999999999999999998 35799999999999877632211000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|..+... ...++||+|++..+.. .+..+ .++++.++++|||||+++.
T Consensus 136 -------~~~rv~~~~~D~~~~l~--~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~ 196 (294)
T 3adn_A 136 -------DDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -------TCTTCCEECSCSCC-----CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEE
T ss_pred -------cCCceEEEEChHHHHHh--hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEE
Confidence 01247889999887543 2357899999855421 22223 6899999999999999985
No 203
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.02 E-value=6.7e-09 Score=103.42 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=92.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccc
Q 015160 172 KPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHS 248 (412)
Q Consensus 172 ~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~ 248 (412)
..+.+.+.+.+... ++.+|||||||+|.++..++++ +..++|+|++..|+..|
T Consensus 25 ~~l~~~~~~~~~~~---~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------------------- 80 (421)
T 2ih2_A 25 PEVVDFMVSLAEAP---RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------------------- 80 (421)
T ss_dssp HHHHHHHHHHCCCC---TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------------------
T ss_pred HHHHHHHHHhhccC---CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------------------
Confidence 45777777776532 4569999999999999999984 57999999999885210
Q ss_pred cCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC-C--------hhhH----
Q 015160 249 NCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID-T--------AHNI---- 313 (412)
Q Consensus 249 ~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID-t--------a~Ni---- 313 (412)
.++.+..+|+.+... .++||+|+++ |+-. . ....
T Consensus 81 ---------------------------~~~~~~~~D~~~~~~----~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~ 129 (421)
T 2ih2_A 81 ---------------------------PWAEGILADFLLWEP----GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLY 129 (421)
T ss_dssp ---------------------------TTEEEEESCGGGCCC----SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHH
T ss_pred ---------------------------CCCcEEeCChhhcCc----cCCCCEEEECcCccCcccccccccccCHHHHHHH
Confidence 126788999987532 4689999996 3311 1 1222
Q ss_pred --------------HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCC
Q 015160 314 --------------VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 368 (412)
Q Consensus 314 --------------~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GF 368 (412)
..+++.+.++|||||+++-+-|--|.+. -..+++++.+.+.|+
T Consensus 130 ~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~~~l~~------------~~~~~lr~~l~~~~~ 186 (421)
T 2ih2_A 130 KKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVL------------EDFALLREFLAREGK 186 (421)
T ss_dssp HHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEGGGGTC------------GGGHHHHHHHHHHSE
T ss_pred HHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEChHHhcC------------ccHHHHHHHHHhcCC
Confidence 2568899999999999987655433211 134788998888887
No 204
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.02 E-value=1.4e-09 Score=106.98 Aligned_cols=134 Identities=15% Similarity=0.151 Sum_probs=92.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
...+|||+|||+|+++..|+++ +..++++|+ ..|+..++ . .
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~--------------------------------~--~-- 235 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLT--------------------------------G--N-- 235 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCC--------------------------------C--C--
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcc--------------------------------c--C--
Confidence 3469999999999999999998 467999999 57862110 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhh--HHHHHHHHHHhccC---CcEEEEecCcch---
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHN--IVEYIEIISRILKD---GGVWINLGPLLY--- 338 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~N--i~~yl~~I~~~LKP---GG~wIN~GPLly--- 338 (412)
.++.+..+||.+ .. | .||+|+....+....+ ..+.|+.++++||| ||++|-..+..-
T Consensus 236 ---------~~v~~~~~d~~~-~~-~----~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~ 300 (358)
T 1zg3_A 236 ---------ENLNFVGGDMFK-SI-P----SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETS 300 (358)
T ss_dssp ---------SSEEEEECCTTT-CC-C----CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTC
T ss_pred ---------CCcEEEeCccCC-CC-C----CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCC
Confidence 127889999987 22 2 4999998876654444 55999999999999 998874322110
Q ss_pred ------hhh---hccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 339 ------HFA---DLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 339 ------h~~---~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
... +..-......-+.+.+|++++++++||++++..
T Consensus 301 ~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 301 DDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp SCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred ccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 000 000000000235699999999999999998755
No 205
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.02 E-value=9.3e-10 Score=100.34 Aligned_cols=101 Identities=18% Similarity=0.114 Sum_probs=72.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|.++..|+++ | ..|+|+|+|..|+..++..+... ++..
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~--------------------------~~~~- 129 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD--------------------------DPTL- 129 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------CTHH-
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh--------------------------cccc-
Confidence 5679999999999999999987 4 68999999999997766332110 0000
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
....++.+..+|+.+... ..+.||+|+....+.. .++.+.++|||||++|-
T Consensus 130 -------~~~~~v~~~~~d~~~~~~---~~~~fD~i~~~~~~~~------~~~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 130 -------LSSGRVQLVVGDGRMGYA---EEAPYDAIHVGAAAPV------VPQALIDQLKPGGRLIL 180 (226)
T ss_dssp -------HHTSSEEEEESCGGGCCG---GGCCEEEEEECSBBSS------CCHHHHHTEEEEEEEEE
T ss_pred -------cCCCcEEEEECCcccCcc---cCCCcCEEEECCchHH------HHHHHHHhcCCCcEEEE
Confidence 001237788899876432 2468999987654432 34688999999999985
No 206
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.01 E-value=1.1e-09 Score=101.24 Aligned_cols=108 Identities=17% Similarity=0.055 Sum_probs=74.9
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNS 252 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~ 252 (412)
+...+.+.+.. .++.+|||+|||+|.++..|++.+ ..|+|+|+|..|+..++..+...
T Consensus 79 ~~~~~~~~l~~---~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------ 137 (235)
T 1jg1_A 79 MVAIMLEIANL---KPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA------------------ 137 (235)
T ss_dssp HHHHHHHHHTC---CTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred HHHHHHHhcCC---CCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc------------------
Confidence 44444444432 256799999999999999999997 89999999999997776332110
Q ss_pred CCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 253 LSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 253 ~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
+ ..++.+..+|+..-.. ..+.||+|+...-+.... +.+.++|||||++|-
T Consensus 138 --------~-------------~~~v~~~~~d~~~~~~---~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi 187 (235)
T 1jg1_A 138 --------G-------------VKNVHVILGDGSKGFP---PKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLII 187 (235)
T ss_dssp --------T-------------CCSEEEEESCGGGCCG---GGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEE
T ss_pred --------C-------------CCCcEEEECCcccCCC---CCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEE
Confidence 0 0126788888733221 124599999876544332 478899999999974
No 207
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.01 E-value=1.2e-09 Score=109.96 Aligned_cols=140 Identities=8% Similarity=0.079 Sum_probs=92.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|++|. .|+|+|+|..|+..|+.-+.. + .
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~----n----------------------~------ 259 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEA----N----------------------H------ 259 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHH----T----------------------T------
T ss_pred CCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c----------------------C------
Confidence 456999999999999999999997 799999999999877632210 0 0
Q ss_pred CCCCCCCCC-ceeEEecccccccCC-CCCCCCccEEEEe--cc-------cCChhhHHHHHHHHHHhccCCcEEEEecCc
Q 015160 268 HPASAGITE-GFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FF-------IDTAHNIVEYIEIISRILKDGGVWINLGPL 336 (412)
Q Consensus 268 ~p~~~~~~~-~~s~~~GDF~ely~~-~~~~~~fD~VvT~--FF-------IDta~Ni~~yl~~I~~~LKPGG~wIN~GPL 336 (412)
... ++.++.+|+.++... ....++||+|+.. +| .+......+.++.+.++|||||+++-...
T Consensus 260 ------~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~- 332 (385)
T 2b78_A 260 ------LDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN- 332 (385)
T ss_dssp ------CCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC-
T ss_pred ------CCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC-
Confidence 011 478899998774210 0013589999874 22 22234455678888999999999974210
Q ss_pred chhhhhccCCCCCcccCCCHH----HHHHHHHhCCCEEEEEeeccccCC
Q 015160 337 LYHFADLYGQEDEMSIELSLE----DVKRVALHYGFEFEKEKTIETTYT 381 (412)
Q Consensus 337 lyh~~~~~g~~~~~~ieLS~E----EL~~ll~~~GFeii~e~~i~s~Y~ 381 (412)
+-.++.+ .++..+..+|++++.......-+.
T Consensus 333 --------------~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~~~D~p 367 (385)
T 2b78_A 333 --------------AANMTVSQFKKQIEKGFGKQKHTYLDLQQLPSDFA 367 (385)
T ss_dssp --------------CTTSCHHHHHHHHHHHHTTCCCEEEEEECCCTTSC
T ss_pred --------------CCcCCHHHHHHHHHHHHHHcCCcEEEeCCCCCCCC
Confidence 1123334 455566688999666554333333
No 208
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.00 E-value=5.4e-09 Score=104.25 Aligned_cols=125 Identities=11% Similarity=0.051 Sum_probs=88.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+| |+|.++..+|++|. .|+|+|+|..|+..++..+... +
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~--------------------------g----- 219 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI--------------------------G----- 219 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH--------------------------T-----
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C-----
Confidence 467999999 99999999999986 8999999999998776322110 0
Q ss_pred CCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEE-E-EecCcchhhhhc
Q 015160 267 IHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVW-I-NLGPLLYHFADL 343 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~e-ly~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~w-I-N~GPLlyh~~~~ 343 (412)
.. ++.++.+|+.+ +.. ...++||+|++.--.... .+..+++.++++|||||.+ | .+..
T Consensus 220 -------~~-~v~~~~~D~~~~l~~--~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~~-------- 280 (373)
T 2qm3_A 220 -------YE-DIEIFTFDLRKPLPD--YALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGITR-------- 280 (373)
T ss_dssp -------CC-CEEEECCCTTSCCCT--TTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEECT--------
T ss_pred -------CC-CEEEEEChhhhhchh--hccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEec--------
Confidence 01 37889999988 321 124689999986321111 3688999999999999943 2 2111
Q ss_pred cCCCCCcccCCCH---HHHHHHHH-hCCCEEEE
Q 015160 344 YGQEDEMSIELSL---EDVKRVAL-HYGFEFEK 372 (412)
Q Consensus 344 ~g~~~~~~ieLS~---EEL~~ll~-~~GFeii~ 372 (412)
..-+. +++.+++. +.||++..
T Consensus 281 --------~~~~~~~~~~~~~~l~~~~g~~~~~ 305 (373)
T 2qm3_A 281 --------RESSLDKWREIQKLLLNEFNVVITD 305 (373)
T ss_dssp --------TTCCHHHHHHHHHHHHHTSCCEEEE
T ss_pred --------CcCCHHHHHHHHHHHHHhcCcchhh
Confidence 01233 77888888 89998865
No 209
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=96.82 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=64.3
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C----------CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G----------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSD 257 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G----------f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~ 257 (412)
++.+|||+|||+|.++..|+++ | ..|+|+|+|..+. +
T Consensus 22 ~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~-------------------------- 69 (196)
T 2nyu_A 22 PGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------L-------------------------- 69 (196)
T ss_dssp TTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------C--------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhccc------C--------------------------
Confidence 5679999999999999999998 5 6899999998320 0
Q ss_pred CccccccCCCCCCCCCCCCceeEE-ecccccccCC-----CCCCCCccEEEEecccCC----hhhH-------HHHHHHH
Q 015160 258 QLRPVSIPDIHPASAGITEGFSMC-GGDFVEVYSD-----PSQVGAWDAVVTCFFIDT----AHNI-------VEYIEII 320 (412)
Q Consensus 258 qlr~v~iPDv~p~~~~~~~~~s~~-~GDF~ely~~-----~~~~~~fD~VvT~FFIDt----a~Ni-------~~yl~~I 320 (412)
.++.+. .+|+.+.... ....++||+|++.+-++. ..+. ...++.+
T Consensus 70 ------------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 131 (196)
T 2nyu_A 70 ------------------EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVT 131 (196)
T ss_dssp ------------------TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHH
Confidence 013445 5665542100 001358999998543221 1111 4789999
Q ss_pred HHhccCCcEEEE
Q 015160 321 SRILKDGGVWIN 332 (412)
Q Consensus 321 ~~~LKPGG~wIN 332 (412)
+++|||||++|-
T Consensus 132 ~~~LkpgG~lv~ 143 (196)
T 2nyu_A 132 PDILQPGGTFLC 143 (196)
T ss_dssp HHHEEEEEEEEE
T ss_pred HHHhcCCCEEEE
Confidence 999999999985
No 210
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.99 E-value=2e-09 Score=106.95 Aligned_cols=124 Identities=20% Similarity=0.226 Sum_probs=83.4
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~ 247 (412)
.|..++..+.-... ..+.+|||+|||+|.++.+|+++ +..|+++|+|..|+..|+--+.... .
T Consensus 105 ~y~e~L~~l~l~~~----~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~--~--------- 169 (334)
T 1xj5_A 105 AYQEMITHLPLCSI----PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA--I--------- 169 (334)
T ss_dssp HHHHHHHHHHHTTS----SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH--G---------
T ss_pred HHHHHHHHHHHhhC----CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc--c---------
Confidence 35555555532211 14569999999999999999998 4689999999999987763221000 0
Q ss_pred ccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc--cCChhh--HHHHHHHHHHh
Q 015160 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF--IDTAHN--IVEYIEIISRI 323 (412)
Q Consensus 248 ~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF--IDta~N--i~~yl~~I~~~ 323 (412)
++. ..++.++.+|+.++... ...++||+|++..+ +..... ..++++.++++
T Consensus 170 -------------gl~-----------~~rv~~~~~D~~~~l~~-~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~ 224 (334)
T 1xj5_A 170 -------------GYE-----------DPRVNLVIGDGVAFLKN-AAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARA 224 (334)
T ss_dssp -------------GGG-----------STTEEEEESCHHHHHHT-SCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHH
T ss_pred -------------ccC-----------CCcEEEEECCHHHHHHh-ccCCCccEEEECCCCccCcchhhhHHHHHHHHHHh
Confidence 000 12478899998874210 12478999998544 222222 36899999999
Q ss_pred ccCCcEEEEe
Q 015160 324 LKDGGVWINL 333 (412)
Q Consensus 324 LKPGG~wIN~ 333 (412)
|||||+++.-
T Consensus 225 LkpgG~lv~~ 234 (334)
T 1xj5_A 225 LRPGGVVCTQ 234 (334)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCcEEEEe
Confidence 9999999963
No 211
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.99 E-value=9.7e-10 Score=100.86 Aligned_cols=104 Identities=19% Similarity=0.170 Sum_probs=73.0
Q ss_pred CCCeEEEecCCCChhHHHHHHc-CC-------eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCcc
Q 015160 189 SPPACLVPGAGLGRLALEISHL-GF-------ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLR 260 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-Gf-------~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr 260 (412)
++.+|||+|||+|.++..|+++ |. .|+|+|+|..|+..++..+.... ..
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~----~~------------------- 140 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDD----RS------------------- 140 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHH----HH-------------------
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcC----cc-------------------
Confidence 5679999999999999999985 53 89999999999987763332100 00
Q ss_pred ccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE-ecC
Q 015160 261 PVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN-LGP 335 (412)
Q Consensus 261 ~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN-~GP 335 (412)
.+. ..++.+..+|+.+.+. ..+.||+|+....+... ++.+.++|||||++|- +++
T Consensus 141 ~~~-----------~~~v~~~~~d~~~~~~---~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 141 MLD-----------SGQLLIVEGDGRKGYP---PNAPYNAIHVGAAAPDT------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp HHH-----------HTSEEEEESCGGGCCG---GGCSEEEEEECSCBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred ccC-----------CCceEEEECCcccCCC---cCCCccEEEECCchHHH------HHHHHHHhcCCCEEEEEEec
Confidence 000 0136788899876332 13689999877655432 3788999999999985 443
No 212
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.99 E-value=2.1e-09 Score=104.64 Aligned_cols=146 Identities=18% Similarity=0.195 Sum_probs=100.4
Q ss_pred CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhccccc
Q 015160 159 WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETA 237 (412)
Q Consensus 159 WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~ 237 (412)
|+.--..||.. + .+.+. ++.+|||+|||+|.++..+|++|. .|+|+|+++.++..++.-+. .
T Consensus 108 f~~~~~~er~r----i----~~~~~-----~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~----~ 170 (278)
T 3k6r_A 108 FSPANVKERVR----M----AKVAK-----PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIH----L 170 (278)
T ss_dssp CCGGGHHHHHH----H----HHHCC-----TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHH----H
T ss_pred EcCCcHHHHHH----H----HHhcC-----CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHH----H
Confidence 77766777752 3 33332 567999999999999999999995 89999999999876552211 0
Q ss_pred ccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHH
Q 015160 238 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYI 317 (412)
Q Consensus 238 ~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl 317 (412)
+ ...+++.++.+|.+++.. .+.||.|+... ...-.+++
T Consensus 171 N----------------------------------~v~~~v~~~~~D~~~~~~----~~~~D~Vi~~~----p~~~~~~l 208 (278)
T 3k6r_A 171 N----------------------------------KVEDRMSAYNMDNRDFPG----ENIADRILMGY----VVRTHEFI 208 (278)
T ss_dssp T----------------------------------TCTTTEEEECSCTTTCCC----CSCEEEEEECC----CSSGGGGH
T ss_pred c----------------------------------CCCCcEEEEeCcHHHhcc----ccCCCEEEECC----CCcHHHHH
Confidence 0 112347889999988753 57899887542 22234678
Q ss_pred HHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 318 EIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 318 ~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
+...++|||||++.- |.+... . ....-..+.++++++..||++...
T Consensus 209 ~~a~~~lk~gG~ih~-----~~~~~e---~--~~~~~~~e~i~~~~~~~g~~v~~~ 254 (278)
T 3k6r_A 209 PKALSIAKDGAIIHY-----HNTVPE---K--LMPREPFETFKRITKEYGYDVEKL 254 (278)
T ss_dssp HHHHHHEEEEEEEEE-----EEEEEG---G--GTTTTTHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHcCCCCEEEE-----Eeeecc---c--ccchhHHHHHHHHHHHcCCcEEEE
Confidence 888999999997641 222211 0 012345688899999999998653
No 213
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.99 E-value=4.1e-09 Score=101.67 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=76.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+++.+.+.++.. ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+.. .
T Consensus 16 i~~~i~~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~~~v~~vD~~~~~~~~a~~~~~~---~---------------- 73 (285)
T 1zq9_A 16 IINSIIDKAALR---PTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQG---T---------------- 73 (285)
T ss_dssp HHHHHHHHTCCC---TTCEEEEECCTTSTTHHHHHHHSSEEEEEESCHHHHHHHHHHHTT---S----------------
T ss_pred HHHHHHHhcCCC---CCCEEEEEcCcccHHHHHHHhhCCEEEEEECCHHHHHHHHHHHHh---c----------------
Confidence 556666655422 567999999999999999999999999999999999766522110 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCCh-hhHHHHHH--------------
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTA-HNIVEYIE-------------- 318 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta-~Ni~~yl~-------------- 318 (412)
....++.++.+|+.++.. ..||+|++..-.... +-+...++
T Consensus 74 -------------------~~~~~v~~~~~D~~~~~~-----~~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qk 129 (285)
T 1zq9_A 74 -------------------PVASKLQVLVGDVLKTDL-----PFFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQR 129 (285)
T ss_dssp -------------------TTGGGEEEEESCTTTSCC-----CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEH
T ss_pred -------------------CCCCceEEEEcceecccc-----hhhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhH
Confidence 001247889999987632 379999987422211 21233332
Q ss_pred HH--HHhccCCcEEE
Q 015160 319 II--SRILKDGGVWI 331 (412)
Q Consensus 319 ~I--~~~LKPGG~wI 331 (412)
++ +++|||||.+.
T Consensus 130 Eva~r~vlkPGg~~y 144 (285)
T 1zq9_A 130 EFALRLVAKPGDKLY 144 (285)
T ss_dssp HHHHHHHCCTTCTTC
T ss_pred HHHHHHhcCCCCccc
Confidence 33 36899999763
No 214
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.98 E-value=8.8e-10 Score=107.90 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=77.4
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+||++|||+|.++.+++++ +..|+++|+|..|+..|+-.+..... . .+.
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~-~----------------------~~~--- 130 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQ-G----------------------AFD--- 130 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHT-T----------------------GGG---
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc-c----------------------ccc---
Confidence 3469999999999999999998 56899999999999877632210000 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC-----hhh--HHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT-----AHN--IVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt-----a~N--i~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.+... ...++||+|+...+... ... ..++++.++++|||||+++.
T Consensus 131 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 193 (314)
T 1uir_A 131 --------DPRAVLVIDDARAYLE--RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM 193 (314)
T ss_dssp --------CTTEEEEESCHHHHHH--HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred --------CCceEEEEchHHHHHH--hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEE
Confidence 1247889999887421 12478999998765432 122 36899999999999999984
No 215
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.98 E-value=5.7e-09 Score=102.72 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++.+++++ +..|+++|+|..|+..|+-.+... ++ .+.
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~---------------~~---------~~~--- 168 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI---------------SC---------GYE--- 168 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT---------------SG---------GGG---
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh---------------cc---------ccC---
Confidence 3469999999999999999998 478999999999998776221100 00 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.+... ...++||+|++..+- .....+ .++++.++++|||||+++.
T Consensus 169 --------~~~v~~~~~D~~~~l~--~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 228 (321)
T 2pt6_A 169 --------DKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 228 (321)
T ss_dssp --------STTEEEEESCHHHHHH--HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEEccHHHHHh--hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1247889999877421 124789999976542 122233 6899999999999999985
No 216
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.97 E-value=1.4e-09 Score=107.82 Aligned_cols=103 Identities=19% Similarity=0.183 Sum_probs=76.1
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
+.+||++|||+|.++.+|+++ +..|+++|++..|+..|+--+. .+
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~-------------------------------~~-- 136 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFD-------------------------------IP-- 136 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSC-------------------------------CC--
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcc-------------------------------cc--
Confidence 359999999999999999983 7799999999999987762110 00
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|..++.. ....++||+|++-.|.. ....+ .++++.++++|||||+++.
T Consensus 137 ------~~~rv~v~~~Da~~~l~-~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~ 198 (317)
T 3gjy_A 137 ------RAPRVKIRVDDARMVAE-SFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVA 198 (317)
T ss_dssp ------CTTTEEEEESCHHHHHH-TCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEE
T ss_pred ------CCCceEEEECcHHHHHh-hccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01348899999887532 11247899999865432 12222 5899999999999999984
No 217
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.97 E-value=4.5e-09 Score=102.81 Aligned_cols=130 Identities=11% Similarity=0.009 Sum_probs=88.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||++ +..|+|+|+|..|+..++-.+... ++
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~--------------------------g~--- 168 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL--------------------------GV--- 168 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh--------------------------CC---
Confidence 5679999999999999999986 368999999999997666332110 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---c---ccCChh---------h-------HHHHHHHHHHh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---F---FIDTAH---------N-------IVEYIEIISRI 323 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---F---FIDta~---------N-------i~~yl~~I~~~ 323 (412)
.++.++.+|+.++.. ..+.||+|+.. . .+...+ + ..+.|+.++++
T Consensus 169 ----------~~v~~~~~D~~~~~~---~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~ 235 (315)
T 1ixk_A 169 ----------LNVILFHSSSLHIGE---LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEV 235 (315)
T ss_dssp ----------CSEEEESSCGGGGGG---GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CeEEEEECChhhccc---ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 136788899887642 24689999873 1 122111 1 14789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 324 LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
|||||++|-..-- .+ -+=..+.+..++++.||+++..
T Consensus 236 LkpGG~lv~stcs-~~------------~~Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 236 LKPGGILVYSTCS-LE------------PEENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp EEEEEEEEEEESC-CC------------GGGTHHHHHHHHHHSSEEEECC
T ss_pred CCCCCEEEEEeCC-CC------------hHHhHHHHHHHHhcCCCEEecC
Confidence 9999999842110 00 0113456778888899988753
No 218
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.96 E-value=3.5e-09 Score=103.33 Aligned_cols=172 Identities=13% Similarity=0.086 Sum_probs=104.7
Q ss_pred HHHHHHHhcCcc--cChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCC--ChhHHHHHHc---CCeEEEEeCCHH
Q 015160 150 CIIRNIVRDWAA--EGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGL--GRLALEISHL---GFISQGNEFSYY 222 (412)
Q Consensus 150 s~L~q~~RDWS~--eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGl--GRLa~eLA~~---Gf~V~GnD~S~~ 222 (412)
..-.++.+-|.. ....+-...+...+.+|... . ...+|||+|||+ |....++|++ +..|+|+|.|..
T Consensus 43 ~~~~~~~~~~P~~~~~a~~nr~fl~rav~~l~~~---~---g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~ 116 (277)
T 3giw_A 43 EAGDAMSREWPALPVHMRANRDWMNRAVAHLAKE---A---GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPI 116 (277)
T ss_dssp HHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHT---S---CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhccc---c---CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChH
Confidence 444555555544 22222223334444444321 1 235899999998 5566777664 789999999999
Q ss_pred HHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEeccccccc---CCCCCCCCcc
Q 015160 223 MMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVY---SDPSQVGAWD 299 (412)
Q Consensus 223 ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely---~~~~~~~~fD 299 (412)
||..|+-.+... ...++.|+.+|++++. ..+...+.||
T Consensus 117 mLa~Ar~~l~~~---------------------------------------~~~~~~~v~aD~~~~~~~l~~~~~~~~~D 157 (277)
T 3giw_A 117 VLTLSQGLLAST---------------------------------------PEGRTAYVEADMLDPASILDAPELRDTLD 157 (277)
T ss_dssp HHHTTHHHHCCC---------------------------------------SSSEEEEEECCTTCHHHHHTCHHHHTTCC
T ss_pred HHHHHHHHhccC---------------------------------------CCCcEEEEEecccChhhhhcccccccccC
Confidence 997666433110 0124789999998852 1010023455
Q ss_pred -----EEEEe---cccCChhhHHHHHHHHHHhccCCcEEEE--ecCcch-h--------hhhccCCCCCcccCCCHHHHH
Q 015160 300 -----AVVTC---FFIDTAHNIVEYIEIISRILKDGGVWIN--LGPLLY-H--------FADLYGQEDEMSIELSLEDVK 360 (412)
Q Consensus 300 -----~VvT~---FFIDta~Ni~~yl~~I~~~LKPGG~wIN--~GPLly-h--------~~~~~g~~~~~~ieLS~EEL~ 360 (412)
+|+.+ .||....+...+|+++++.|+|||+++- +.+-.- + |.. .| .+ ....|.+||.
T Consensus 158 ~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~-~g-~p--~~~rs~~ei~ 233 (277)
T 3giw_A 158 LTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGRVAREYAA-RN-MP--MRLRTHAEAE 233 (277)
T ss_dssp TTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHHHHHHHHH-TT-CC--CCCCCHHHHH
T ss_pred cCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHHHHHHHHh-cC-CC--CccCCHHHHH
Confidence 45544 3666655578999999999999999984 222110 0 111 12 22 3357999999
Q ss_pred HHHHhCCCEEEE
Q 015160 361 RVALHYGFEFEK 372 (412)
Q Consensus 361 ~ll~~~GFeii~ 372 (412)
+++. ||++++
T Consensus 234 ~~f~--Glelve 243 (277)
T 3giw_A 234 EFFE--GLELVE 243 (277)
T ss_dssp HTTT--TSEECT
T ss_pred HHhC--CCcccC
Confidence 9994 999877
No 219
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.96 E-value=1.1e-09 Score=105.44 Aligned_cols=111 Identities=17% Similarity=0.194 Sum_probs=75.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccc-cCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS-IPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~-iPD 266 (412)
.+.+|||+|||+|.++.+++++|. .|+++|+|..|+..|+-.+ ... . ++. ..+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~--~----------------------~l~~~~~ 129 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KID--N----------------------GLLEAML 129 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTT--T----------------------THHHHHH
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhc--c----------------------ccccccc
Confidence 356999999999999999999965 8999999999998776322 100 0 000 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
.....++.++.+|..++.. . .++||+|+...+.. ....+ .++++.++++|||||+++.
T Consensus 130 -----~~~~~~v~~~~~D~~~~l~--~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 191 (281)
T 1mjf_A 130 -----NGKHEKAKLTIGDGFEFIK--N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVT 191 (281)
T ss_dssp -----TTCCSSEEEEESCHHHHHH--H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEE
T ss_pred -----cCCCCcEEEEECchHHHhc--c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 0001247889999876422 1 46899999765421 12222 6899999999999999985
No 220
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.96 E-value=1.6e-09 Score=105.80 Aligned_cols=129 Identities=16% Similarity=0.146 Sum_probs=80.7
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHHhhhhcccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWI 246 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i 246 (412)
.|+.....+...+.. .++.+|||+|||+|.++..||+. | ..|+|+|+|..|+..|+-.+.... ..+.+
T Consensus 89 ~~~~~~~~~l~~l~~---~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~l---- 159 (336)
T 2b25_A 89 TFPKDINMILSMMDI---NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWR--DSWKL---- 159 (336)
T ss_dssp CCHHHHHHHHHHHTC---CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHH--HHHTT----
T ss_pred cCHHHHHHHHHhcCC---CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhh--ccccc----
Confidence 444434444443321 25679999999999999999998 5 789999999999987763321100 00000
Q ss_pred cccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 015160 247 HSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 247 ~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
| .+. ....++.+..+|+.+... +...+.||+|+.... +...+++.++++|||
T Consensus 160 ----n---------~~~---------~~~~~v~~~~~d~~~~~~-~~~~~~fD~V~~~~~-----~~~~~l~~~~~~Lkp 211 (336)
T 2b25_A 160 ----S---------HVE---------EWPDNVDFIHKDISGATE-DIKSLTFDAVALDML-----NPHVTLPVFYPHLKH 211 (336)
T ss_dssp ----T---------CSS---------CCCCCEEEEESCTTCCC--------EEEEEECSS-----STTTTHHHHGGGEEE
T ss_pred ----c---------ccc---------ccCCceEEEECChHHccc-ccCCCCeeEEEECCC-----CHHHHHHHHHHhcCC
Confidence 0 000 011347889999887531 122467999987432 223478999999999
Q ss_pred CcEEEEecC
Q 015160 327 GGVWINLGP 335 (412)
Q Consensus 327 GG~wIN~GP 335 (412)
||++|-..|
T Consensus 212 gG~lv~~~~ 220 (336)
T 2b25_A 212 GGVCAVYVV 220 (336)
T ss_dssp EEEEEEEES
T ss_pred CcEEEEEeC
Confidence 999996544
No 221
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.96 E-value=7.1e-10 Score=106.65 Aligned_cols=100 Identities=8% Similarity=-0.021 Sum_probs=68.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+|++ ..|+|+|+|+ |+.. +.+. + ++.
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-~~V~gvD~s~-m~~~-------a~~~-----------------------~--~~~-- 117 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-PHVMDVRAYT-LGVG-------GHEV-----------------------P--RIT-- 117 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-TTEEEEEEEC-CCCS-------SCCC-----------------------C--CCC--
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-CcEEEEECch-hhhh-------hhhh-----------------------h--hhh--
Confidence 5679999999999999999999 7899999998 7411 0000 0 000
Q ss_pred CCCCCCCCceeEE--ecccccccCCCCCCCCccEEEEecc-cCChh--h---HHHHHHHHHHhccCCc--EEEE
Q 015160 269 PASAGITEGFSMC--GGDFVEVYSDPSQVGAWDAVVTCFF-IDTAH--N---IVEYIEIISRILKDGG--VWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~--~GDF~ely~~~~~~~~fD~VvT~FF-IDta~--N---i~~yl~~I~~~LKPGG--~wIN 332 (412)
.....++.++ .+|++++. .++||+|++.+- +.... + ....|+.++++||||| .||-
T Consensus 118 ---~~~~~~v~~~~~~~D~~~l~-----~~~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 118 ---ESYGWNIVKFKSRVDIHTLP-----VERTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp ---CBTTGGGEEEECSCCTTTSC-----CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ---hccCCCeEEEecccCHhHCC-----CCCCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 0011246788 89998853 378999998642 11111 1 1237899999999999 8874
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.94 E-value=3.1e-09 Score=102.43 Aligned_cols=107 Identities=17% Similarity=0.162 Sum_probs=77.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++.++++.+ -.|+++|+|..|+..++-.+... . ...
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~-------------------~-----~~~---- 129 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI-------------------S-----CGY---- 129 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-------------------S-----GGG----
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHh-------------------c-----ccc----
Confidence 45699999999999999999883 68999999999998776322100 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--ChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|+.+... ...++||+|+...+.. ....+ .++++.++++|||||+++.
T Consensus 130 -------~~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~ 190 (283)
T 2i7c_A 130 -------EDKRVNVFIEDASKFLE--NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVA 190 (283)
T ss_dssp -------GSTTEEEEESCHHHHHH--HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCcEEEEECChHHHHH--hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01247889999887432 1247899999755422 23334 5899999999999999985
No 223
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.94 E-value=2.3e-09 Score=104.76 Aligned_cols=107 Identities=21% Similarity=0.184 Sum_probs=74.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+|||+|||+|.++.+|++++ ..|+++|+|..|+..|+--+.... . .+.
T Consensus 95 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~--~----------------------~~~--- 147 (304)
T 2o07_A 95 NPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA--I----------------------GYS--- 147 (304)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH--G----------------------GGG---
T ss_pred CCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh--c----------------------ccC---
Confidence 45699999999999999999985 689999999999987763221000 0 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC--Chh--hHHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID--TAH--NIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID--ta~--Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|..++.. ...++||+|++..+.. .+. ...++++.++++|||||+++.
T Consensus 148 --------~~rv~v~~~Da~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 207 (304)
T 2o07_A 148 --------SSKLTLHVGDGFEFMK--QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCC 207 (304)
T ss_dssp --------CTTEEEEESCHHHHHH--TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEE
T ss_pred --------CCcEEEEECcHHHHHh--hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEE
Confidence 1247889999877422 1247899999764321 111 124789999999999999985
No 224
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.93 E-value=1.3e-09 Score=111.75 Aligned_cols=146 Identities=13% Similarity=0.100 Sum_probs=94.7
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCC------CChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAG------LGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEW 240 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCG------lGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~ 240 (412)
.|.++.+.+.+.+.. ++.+|||+||| +|..+..++++ +..|+|+|+|..|.. +
T Consensus 201 ~y~~~Ye~lL~~l~~----~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------~-------- 262 (419)
T 3sso_A 201 WFTPHYDRHFRDYRN----QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------D-------- 262 (419)
T ss_dssp BCHHHHHHHHGGGTT----SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------C--------
T ss_pred hHHHHHHHHHHhhcC----CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------c--------
Confidence 466666665554432 45799999999 88888888875 679999999998820 0
Q ss_pred cccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCC---CCCCCccEEEEecccCChhhHHHHH
Q 015160 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDP---SQVGAWDAVVTCFFIDTAHNIVEYI 317 (412)
Q Consensus 241 ~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~---~~~~~fD~VvT~FFIDta~Ni~~yl 317 (412)
..++.+++||+.++.... ...++||+|++.. .....+...+|
T Consensus 263 ----------------------------------~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL 307 (419)
T 3sso_A 263 ----------------------------------ELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSF 307 (419)
T ss_dssp ----------------------------------BTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHH
Confidence 013788999988753200 0037899998643 33456788999
Q ss_pred HHHHHhccCCcEEEEecCcchhhhhccCCCC--CcccCCCHHHHHHHHHhCCCE
Q 015160 318 EIISRILKDGGVWINLGPLLYHFADLYGQED--EMSIELSLEDVKRVALHYGFE 369 (412)
Q Consensus 318 ~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~--~~~ieLS~EEL~~ll~~~GFe 369 (412)
+.++++|||||++|... +...+-..+++.. ...-.-..+-++.++.....+
T Consensus 308 ~el~rvLKPGGvlVi~D-l~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~ 360 (419)
T 3sso_A 308 AALFPHVRPGGLYVIED-MWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQ 360 (419)
T ss_dssp HHHGGGEEEEEEEEEEC-GGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGG
T ss_pred HHHHHhcCCCeEEEEEe-cccccCcccCCCccCCcchhHHHHHHHHHHHHhccc
Confidence 99999999999998532 2222222222111 012233566777777766643
No 225
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.93 E-value=1.9e-09 Score=103.62 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=76.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+|||+|||+|.++.+++++ | -.|+++|++..|+..|+--+... ++ ..
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~---------------~~---------~~---- 126 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSI---------------AG---------KL---- 126 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHH---------------HT---------TT----
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhh---------------cc---------cc----
Confidence 3569999999999999999998 5 58999999999998776322100 00 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCC--hhh--HHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDT--AHN--IVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDt--a~N--i~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|..+.-. ...++||+|+.-.+-.. +.. ..++++.++++|||||+++.
T Consensus 127 -------~~~rv~v~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 127 -------DDPRVDVQVDDGFMHIA--KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp -------TSTTEEEEESCSHHHHH--TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred -------CCCceEEEECcHHHHHh--hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 01247889999887432 12478999997543211 111 25899999999999999985
No 226
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.93 E-value=2.2e-09 Score=104.23 Aligned_cols=107 Identities=15% Similarity=0.096 Sum_probs=74.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+|||+|||+|.++.+++++ | ..|+++|+|..|+..++--+..... .+.
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~------------------------~~~--- 142 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSC------------------------GFD--- 142 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHG------------------------GGG---
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhcc------------------------ccC---
Confidence 3469999999999999999998 3 6899999999999877632210000 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccC---Chh--hHHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAH--NIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFID---ta~--Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.+... ...++||+|+...+-. ... ...++++.++++|||||+++.
T Consensus 143 --------~~~v~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 203 (296)
T 1inl_A 143 --------DPRAEIVIANGAEYVR--KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSA 203 (296)
T ss_dssp --------CTTEEEEESCHHHHGG--GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEE
T ss_pred --------CCceEEEECcHHHHHh--hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 1247889999877422 1247899999754321 111 126899999999999999985
No 227
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.91 E-value=2.5e-09 Score=102.28 Aligned_cols=97 Identities=14% Similarity=0.087 Sum_probs=74.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|.++..+|+++- .|+|+|+|..|+..++..+.. + .
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----n----------------------~----- 167 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----N----------------------K----- 167 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH----T----------------------T-----
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C-----
Confidence 557999999999999999999965 899999999999776632210 0 0
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.||+.++ .. .++||+|+...- .+..++++.+.++|||||+++-
T Consensus 168 --------l~~~~~~~~d~~~~-~~---~~~~D~Vi~d~p----~~~~~~l~~~~~~LkpgG~l~~ 217 (272)
T 3a27_A 168 --------LNNVIPILADNRDV-EL---KDVADRVIMGYV----HKTHKFLDKTFEFLKDRGVIHY 217 (272)
T ss_dssp --------CSSEEEEESCGGGC-CC---TTCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEE
T ss_pred --------CCCEEEEECChHHc-Cc---cCCceEEEECCc----ccHHHHHHHHHHHcCCCCEEEE
Confidence 01367899999886 31 468999976543 2556789999999999999873
No 228
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.91 E-value=1.6e-08 Score=102.61 Aligned_cols=102 Identities=12% Similarity=0.097 Sum_probs=72.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..+|+.|..|+|+|+|..|+..++..+.. + ++.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~V~avDis~~al~~a~~n~~~----n----------------------g~~----- 262 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAYALAVDKDLEALGVLDQAALR----L----------------------GLR----- 262 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H----------------------TCC-----
T ss_pred CCCeEEEcccchhHHHHHHHHcCCeEEEEECCHHHHHHHHHHHHH----h----------------------CCC-----
Confidence 467999999999999999999999999999999999776632210 0 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCC-------hhhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT-------AHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt-------a~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..+..+|+.++... ..+.||+|+.. +|... ..+..++++.+.++|||||+++-
T Consensus 263 ---------~~~~~~D~~~~l~~--~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~ 324 (393)
T 4dmg_A 263 ---------VDIRHGEALPTLRG--LEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWL 324 (393)
T ss_dssp ---------CEEEESCHHHHHHT--CCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ---------CcEEEccHHHHHHH--hcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 13457888775321 12449999864 23322 23345778888999999999984
No 229
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.89 E-value=7e-08 Score=92.95 Aligned_cols=152 Identities=15% Similarity=0.077 Sum_probs=96.8
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccc
Q 015160 163 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNI 242 (412)
Q Consensus 163 G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I 242 (412)
...||-.+|.++-..+-+. + ++.+|||+|||+|-|+..++ -+..++|.|+|..|+.+++..+...
T Consensus 85 STrerLp~ld~fY~~i~~~-~-----~p~~VLDlGCG~gpLal~~~-~~~~y~a~DId~~~i~~ar~~~~~~-------- 149 (253)
T 3frh_A 85 STKERLAELDTLYDFIFSA-E-----TPRRVLDIACGLNPLALYER-GIASVWGCDIHQGLGDVITPFAREK-------- 149 (253)
T ss_dssp HHHHHGGGHHHHHHHHTSS-C-----CCSEEEEETCTTTHHHHHHT-TCSEEEEEESBHHHHHHHHHHHHHT--------
T ss_pred CHHHHhhhHHHHHHHHhcC-C-----CCCeEEEecCCccHHHHHhc-cCCeEEEEeCCHHHHHHHHHHHHhc--------
Confidence 3567777777777766655 2 46699999999999999988 7789999999999998877543210
Q ss_pred cccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCChhhHHHHHHH
Q 015160 243 YPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAHNIVEYIEI 319 (412)
Q Consensus 243 ~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~Ni~~yl~~ 319 (412)
...+.+..+|+..... .+.||+|+..- .|+...- .....
T Consensus 150 --------------------------------g~~~~~~v~D~~~~~~----~~~~DvvLllk~lh~LE~q~~--~~~~~ 191 (253)
T 3frh_A 150 --------------------------------DWDFTFALQDVLCAPP----AEAGDLALIFKLLPLLEREQA--GSAMA 191 (253)
T ss_dssp --------------------------------TCEEEEEECCTTTSCC----CCBCSEEEEESCHHHHHHHST--THHHH
T ss_pred --------------------------------CCCceEEEeecccCCC----CCCcchHHHHHHHHHhhhhch--hhHHH
Confidence 0126788888776432 46899998753 3332221 23448
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 320 I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
+.+.|+++|++|++.- ....|..+ .++=.+++..+-.-...+.++.+.
T Consensus 192 ll~aL~~~~vvVsfPt-----ksl~Gr~~--gm~~~Y~~~~e~~~~~~~~~~~~~ 239 (253)
T 3frh_A 192 LLQSLNTPRMAVSFPT-----RSLGGRGK--GMEANYAAWFEGGLPAEFEIEDKK 239 (253)
T ss_dssp HHHHCBCSEEEEEEEC-----C-------------CHHHHHHHHSCTTEEEEEEE
T ss_pred HHHHhcCCCEEEEcCh-----HHhcCCCc--chhhHHHHHHHHHhhccchhhhhe
Confidence 8889999999999631 11112222 344444444433335566776654
No 230
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.89 E-value=2.3e-09 Score=105.58 Aligned_cols=107 Identities=18% Similarity=0.207 Sum_probs=73.1
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+||++|||+|.++.++++. +..|+++|+|..|+..|+-.+... ++ ++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~---------------~~---------~~---- 159 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGM---------------SC---------GF---- 159 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTT---------------SG---------GG----
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHh---------------cc---------cc----
Confidence 3469999999999999999988 468999999999998776221100 00 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|+.+... ...++||+|++..+- ..+..+ .++++.++++|||||+++.
T Consensus 160 -------~~~rv~~~~~D~~~~l~--~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~ 220 (314)
T 2b2c_A 160 -------SHPKLDLFCGDGFEFLK--NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSS 220 (314)
T ss_dssp -------GCTTEEEECSCHHHHHH--HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEE
T ss_pred -------CCCCEEEEEChHHHHHH--hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEE
Confidence 01247889999887422 124789999976532 112223 6899999999999999985
No 231
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.89 E-value=7.5e-09 Score=101.39 Aligned_cols=97 Identities=8% Similarity=-0.032 Sum_probs=66.9
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeC----CHHHHHHHHhhhhcccccccccccccccccCCCCCcccCcccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEF----SYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSI 264 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~----S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~i 264 (412)
++.+|||+|||+|.++..||++| .|+|+|+ |..|+. .. .. +..
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~~-~V~gvD~~~~~~~~~~~-------~~-~~----------------------~~~-- 128 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGLK-NVREVKGLTKGGPGHEE-------PI-PM----------------------STY-- 128 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-------CC-CC----------------------CST--
T ss_pred CCCEEEEEcCCCCHHHHHHHhcC-CEEEEeccccCchhHHH-------HH-Hh----------------------hhc--
Confidence 56799999999999999999995 8999999 554420 00 00 000
Q ss_pred CCCCCCCCCCCCceeEEec-ccccccCCCCCCCCccEEEEecccCCh---hh---HHHHHHHHHHhccCCcEEEE
Q 015160 265 PDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAWDAVVTCFFIDTA---HN---IVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 265 PDv~p~~~~~~~~~s~~~G-DF~ely~~~~~~~~fD~VvT~FFIDta---~N---i~~yl~~I~~~LKPGG~wIN 332 (412)
...++.+..+ |++++. .++||+|++.+-..+. .+ ....|+.+.++|||||.||.
T Consensus 129 ---------~~~~v~~~~~~D~~~l~-----~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 129 ---------GWNLVRLQSGVDVFFIP-----PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp ---------TGGGEEEECSCCTTTSC-----CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEE
T ss_pred ---------CCCCeEEEeccccccCC-----cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEE
Confidence 0124788888 888753 3689999985422211 11 12578889999999999985
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.87 E-value=2e-08 Score=100.87 Aligned_cols=107 Identities=11% Similarity=0.094 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++..+.. + ++ +
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~----n----------------------gl--~-- 269 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVEL----N----------------------KL--D-- 269 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------TC--C--
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH----c----------------------CC--C--
Confidence 456999999999999999999986 799999999999877632210 0 00 0
Q ss_pred CCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEe--ccc-------CChhhHHHHHHHHHHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFI-------DTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~--FFI-------Dta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.++... +...++||+|+.. +|. +......+.+..+.++|||||+++-
T Consensus 270 -------~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 270 -------LSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp -------GGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred -------ccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 11378899998875320 0013589999875 221 2225677899999999999999874
No 233
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.87 E-value=3e-08 Score=101.17 Aligned_cols=119 Identities=17% Similarity=0.208 Sum_probs=79.8
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHHhhhhccccc
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSSFILNHTETA 237 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~---------------Gf~V~GnD~S~~ML~~s~filn~~~~~ 237 (412)
++++.+.+.+.. .++.+|||||||+|.+...+++. +..++|+|++..|+..|+..+.. .
T Consensus 158 ~v~~~mv~~l~~---~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l--~- 231 (445)
T 2okc_A 158 PLIQAMVDCINP---QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL--H- 231 (445)
T ss_dssp HHHHHHHHHHCC---CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH--T-
T ss_pred HHHHHHHHHhCC---CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH--h-
Confidence 455555554422 24679999999999999988864 46899999999999877632210 0
Q ss_pred ccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCCh-----
Q 015160 238 GEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTA----- 310 (412)
Q Consensus 238 ~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta----- 310 (412)
++. ..+..+..||++.... .++||+|+++ |.....
T Consensus 232 -----------------------g~~-----------~~~~~i~~gD~l~~~~----~~~fD~Iv~NPPf~~~~~~~~~~ 273 (445)
T 2okc_A 232 -----------------------GIG-----------TDRSPIVCEDSLEKEP----STLVDVILANPPFGTRPAGSVDI 273 (445)
T ss_dssp -----------------------TCC-----------SSCCSEEECCTTTSCC----SSCEEEEEECCCSSCCCTTCCCC
T ss_pred -----------------------CCC-----------cCCCCEeeCCCCCCcc----cCCcCEEEECCCCCCcccccchh
Confidence 000 0024678899876532 3589999987 322110
Q ss_pred ----------hhHHHHHHHHHHhccCCcEEEEecC
Q 015160 311 ----------HNIVEYIEIISRILKDGGVWINLGP 335 (412)
Q Consensus 311 ----------~Ni~~yl~~I~~~LKPGG~wIN~GP 335 (412)
..-..+++.+.++|||||+++-+-|
T Consensus 274 ~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 274 NRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 1124789999999999999986544
No 234
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.86 E-value=9.1e-09 Score=100.03 Aligned_cols=96 Identities=18% Similarity=0.179 Sum_probs=66.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++..+.. . +
T Consensus 42 ~~~~VLDiG~G~G~lt~~La~~~~~v~~vDi~~~~~~~a~~~~~~----~----------------------~------- 88 (299)
T 2h1r_A 42 SSDIVLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKKRCLY----E----------------------G------- 88 (299)
T ss_dssp TTCEEEEECCTTSTTHHHHTTTSSEEEEECSCHHHHHHHHHHHHH----T----------------------T-------
T ss_pred CcCEEEEEcCcCcHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH----c----------------------C-------
Confidence 567999999999999999999999999999999999766632210 0 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-ccCChhhHHHHH---------------HHHHHhccCCc
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-FIDTAHNIVEYI---------------EIISRILKDGG 328 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-FIDta~Ni~~yl---------------~~I~~~LKPGG 328 (412)
..++.++.+|+.++.. ++||+|++.. |--+.+.+...+ +.+.++|+|+|
T Consensus 89 ------~~~v~~~~~D~~~~~~-----~~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 89 ------YNNLEVYEGDAIKTVF-----PKFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp ------CCCEEC----CCSSCC-----CCCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred ------CCceEEEECchhhCCc-----ccCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 0236788899887532 4799999864 222233345555 55778999888
No 235
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.85 E-value=2.4e-08 Score=98.16 Aligned_cols=126 Identities=16% Similarity=0.130 Sum_probs=87.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-------CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccc
Q 015160 189 SPPACLVPGAGLGRLALEISHLG-------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRP 261 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-------f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~ 261 (412)
++.+|||||||+|.++..+++.+ ..++|+|++..|+..|+..+... +
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--------------------------g 183 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--------------------------R 183 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH--------------------------T
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC--------------------------C
Confidence 45799999999999999998875 67999999999998777322100 0
Q ss_pred cccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--c-ccCChh--------------hH-HHHHHHHHHh
Q 015160 262 VSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--F-FIDTAH--------------NI-VEYIEIISRI 323 (412)
Q Consensus 262 v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--F-FIDta~--------------Ni-~~yl~~I~~~ 323 (412)
+ ++.+..||+++.. ..+.||+|+++ | ++.... +. ..+++.+.+.
T Consensus 184 ~--------------~~~i~~~D~l~~~----~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~ 245 (344)
T 2f8l_A 184 Q--------------KMTLLHQDGLANL----LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRY 245 (344)
T ss_dssp C--------------CCEEEESCTTSCC----CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHT
T ss_pred C--------------CceEEECCCCCcc----ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHH
Confidence 0 1467888877632 24789999987 2 332211 12 2579999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEE
Q 015160 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEF 370 (412)
Q Consensus 324 LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFei 370 (412)
|||||+++-+-|--+ +. .-..+++++.+.+.|+..
T Consensus 246 Lk~gG~~~~v~p~~~-~~-----------~~~~~~ir~~l~~~~~~~ 280 (344)
T 2f8l_A 246 TKPGGYLFFLVPDAM-FG-----------TSDFAKVDKFIKKNGHIE 280 (344)
T ss_dssp EEEEEEEEEEEEGGG-GG-----------STTHHHHHHHHHHHEEEE
T ss_pred hCCCCEEEEEECchh-cC-----------CchHHHHHHHHHhCCeEE
Confidence 999999876444211 11 013588999888877643
No 236
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.83 E-value=7.1e-09 Score=99.40 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=71.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
.+.+||++|||+|.++.++++.|-.|+++|++..|+..|+--+.. . + ..+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~~~v~~veid~~~i~~ar~~~~~------------~---~---------~~~------ 121 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPH------------F---H---------EVK------ 121 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSSCEEEEECSCHHHHGGGTTTSTT------------H---H---------HHH------
T ss_pred CCCEEEEEeCCcCHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHh------------h---c---------ccc------
Confidence 346999999999999999998887899999999998654411100 0 0 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|..++. ++||+|+... .+...+++.++++|||||+++.
T Consensus 122 -----~~~rv~~~~~D~~~~~------~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 122 -----NNKNFTHAKQLLDLDI------KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp -----TCTTEEEESSGGGSCC------CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEE
T ss_pred -----CCCeEEEEechHHHHH------hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEE
Confidence 0124788899987642 6799998742 1233589999999999999986
No 237
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.81 E-value=3.7e-08 Score=92.82 Aligned_cols=53 Identities=11% Similarity=0.112 Sum_probs=43.7
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (412)
.+++.+.+.+.. .++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 17 ~~~~~i~~~~~~---~~~~~VLDiG~G~G~lt~~l~~~~~~v~~vD~~~~~~~~a~ 69 (244)
T 1qam_A 17 HNIDKIMTNIRL---NEHDNIFEIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 69 (244)
T ss_dssp HHHHHHHTTCCC---CTTCEEEEECCTTSHHHHHHHHHSSEEEEECSCHHHHHHHH
T ss_pred HHHHHHHHhCCC---CCCCEEEEEeCCchHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 356666665542 25679999999999999999999999999999999997655
No 238
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.80 E-value=8.8e-09 Score=103.26 Aligned_cols=106 Identities=15% Similarity=0.093 Sum_probs=76.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|+.|. .|+|+|+|..|+..++..+.. + .
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~----n----------------------~------ 264 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKL----N----------------------G------ 264 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------T------
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C------
Confidence 456999999999999999999987 899999999999777632210 0 0
Q ss_pred CCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEe--cccCCh-------hhHHHHHHHHHHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDTA-------HNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~--FFIDta-------~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|+.++... ....++||+|+.. +|.... .+..+++..+.++|||||+++-
T Consensus 265 ------~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 333 (396)
T 2as0_A 265 ------VEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVT 333 (396)
T ss_dssp ------CGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred ------CCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 011478899998775320 0013689999874 232222 4456788999999999998874
No 239
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.78 E-value=1.3e-08 Score=97.13 Aligned_cols=133 Identities=14% Similarity=-0.034 Sum_probs=86.7
Q ss_pred CCCeEEEecCCCChhHHHHHH--cC-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISH--LG-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~--~G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||+ .| ..|+|+|+|..|+..++..+... +
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~--------------------------g---- 132 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM--------------------------G---- 132 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT--------------------------T----
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh--------------------------C----
Confidence 567999999999999999998 35 78999999999997665322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEec-c--cC---------------ChhhHHHHHHHHHHhccC
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCF-F--ID---------------TAHNIVEYIEIISRILKD 326 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~F-F--ID---------------ta~Ni~~yl~~I~~~LKP 326 (412)
..++.++.+|+.++... ....+.||+|+..- | +- ......+.++.+.++|||
T Consensus 133 ---------~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkp 203 (274)
T 3ajd_A 133 ---------VLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKK 203 (274)
T ss_dssp ---------CCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEE
T ss_pred ---------CCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 01367888998875320 00136899998641 1 11 112346889999999999
Q ss_pred CcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHH-hCCCEEEEE
Q 015160 327 GGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVAL-HYGFEFEKE 373 (412)
Q Consensus 327 GG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~-~~GFeii~e 373 (412)
||++|-...-+. -+=..+.+..+++ ..+|+++..
T Consensus 204 gG~lv~stcs~~-------------~~ene~~v~~~l~~~~~~~~~~~ 238 (274)
T 3ajd_A 204 DGELVYSTCSME-------------VEENEEVIKYILQKRNDVELIII 238 (274)
T ss_dssp EEEEEEEESCCC-------------TTSSHHHHHHHHHHCSSEEEECC
T ss_pred CCEEEEEECCCC-------------hHHhHHHHHHHHHhCCCcEEecC
Confidence 999984211100 0123455666665 457877653
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.77 E-value=5.2e-08 Score=97.43 Aligned_cols=104 Identities=13% Similarity=0.001 Sum_probs=74.7
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p 269 (412)
+.+|||+|||+|.++..+|+.+..|+|+|+|..|+..++..+.. + .
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~~~~v~~vD~s~~~~~~a~~n~~~----n----------------------~-------- 255 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAEALRRAEENARL----N----------------------G-------- 255 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHHEEEEEEEESCHHHHHHHHHHHHH----T----------------------T--------
T ss_pred CCeEEEeeeccCHHHHHHHHhCCEEEEEECCHHHHHHHHHHHHH----c----------------------C--------
Confidence 45899999999999999999977899999999999877632210 0 0
Q ss_pred CCCCCCCceeEEecccccccCC-CCCCCCccEEEEe--cccCC-------hhhHHHHHHHHHHhccCCcEEEE
Q 015160 270 ASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTC--FFIDT-------AHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 270 ~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~--FFIDt-------a~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
..++.++.+|+.++... ....++||+|+.. +|... .....+++..+.++|||||+++-
T Consensus 256 -----~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 323 (382)
T 1wxx_A 256 -----LGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILAT 323 (382)
T ss_dssp -----CTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -----CCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 01267899998875320 0013689999863 23211 14456788999999999999884
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=2.4e-08 Score=108.26 Aligned_cols=140 Identities=12% Similarity=0.132 Sum_probs=93.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+|||+|||+|.++..+|+.|.. |+|+|+|..||..++--+.. + ++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~----n----------------------gl~---- 588 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRL----N----------------------GLT---- 588 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH----T----------------------TCC----
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH----c----------------------CCC----
Confidence 4569999999999999999999985 99999999999776622110 0 000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--ccc---------CChhhHHHHHHHHHHhccCCcEEEEecCc
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFI---------DTAHNIVEYIEIISRILKDGGVWINLGPL 336 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFI---------Dta~Ni~~yl~~I~~~LKPGG~wIN~GPL 336 (412)
..++.++.+|+.++.. ...++||+|+.. +|. +...+..+.++.+.++|||||+++-....
T Consensus 589 -------~~~v~~i~~D~~~~l~--~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 589 -------GRAHRLIQADCLAWLR--EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp -------STTEEEEESCHHHHHH--HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred -------ccceEEEecCHHHHHH--hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 1247899999988532 124789999874 232 22345667799999999999999831110
Q ss_pred chhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE--EeeccccCCCCc
Q 015160 337 LYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK--EKTIETTYTTNP 384 (412)
Q Consensus 337 lyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~--e~~i~s~Y~~d~ 384 (412)
..+.+. ...+.+.||+... ...++..+..++
T Consensus 660 -------------~~~~~~----~~~l~~~g~~~~~i~~~~lp~df~~~~ 692 (703)
T 3v97_A 660 -------------RGFRMD----LDGLAKLGLKAQEITQKTLSQDFARNR 692 (703)
T ss_dssp -------------TTCCCC----HHHHHHTTEEEEECTTTTCCGGGTTCS
T ss_pred -------------cccccC----HHHHHHcCCceeeeeeccCCCCCCCCC
Confidence 012333 3456678998544 234444454443
No 242
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.74 E-value=2.7e-09 Score=99.95 Aligned_cols=99 Identities=14% Similarity=0.181 Sum_probs=68.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++ +. +
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~~~~v~~id~~~~~~~~a~-------~~------------------------~------ 71 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSS-------EK------------------------L------ 71 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHHSSEEEESSSSCSSSSSSS-------CT------------------------T------
T ss_pred CCCEEEEEeCCCCHHHHHHHHhCCeEEEEECCHHHHHHHH-------HH------------------------h------
Confidence 5679999999999999999999999999999999963211 10 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccCChhhHHHH----------H----HHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTAHNIVEY----------I----EIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta~Ni~~y----------l----~~I~~~LKPGG~wIN 332 (412)
....++.++.+|+.++.. + ..++| .|+++ |++.+ .-+... + +.+.++|||||.+.-
T Consensus 72 ----~~~~~v~~~~~D~~~~~~-~-~~~~f-~vv~n~Py~~~~-~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 72 ----KLNTRVTLIHQDILQFQF-P-NKQRY-KIVGNIPYHLST-QIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp ----TTCSEEEECCSCCTTTTC-C-CSSEE-EEEEECCSSSCH-HHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred ----ccCCceEEEECChhhcCc-c-cCCCc-EEEEeCCccccH-HHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 001247889999988642 1 12578 55554 34432 223333 3 679999999998763
No 243
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.73 E-value=2.2e-08 Score=98.79 Aligned_cols=120 Identities=11% Similarity=0.052 Sum_probs=84.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++.. |+.+..|+|+|+|..|+..++..+.. +
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~~~~V~~vD~s~~ai~~a~~n~~~----n------------------------------ 239 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKNAKKIYAIDINPHAIELLKKNIKL----N------------------------------ 239 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTTSSEEEEEESCHHHHHHHHHHHHH----T------------------------------
T ss_pred CCCEEEEccCccCHHHHh-ccCCCEEEEEECCHHHHHHHHHHHHH----c------------------------------
Confidence 456999999999999999 98777899999999999776632210 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
....++.++.+|+.++. ++||+|+.. ......++++.+.++|||||+++-.. +. +
T Consensus 240 ----~l~~~v~~~~~D~~~~~------~~fD~Vi~d----pP~~~~~~l~~~~~~L~~gG~l~~~~-----~~------~ 294 (336)
T 2yx1_A 240 ----KLEHKIIPILSDVREVD------VKGNRVIMN----LPKFAHKFIDKALDIVEEGGVIHYYT-----IG------K 294 (336)
T ss_dssp ----TCTTTEEEEESCGGGCC------CCEEEEEEC----CTTTGGGGHHHHHHHEEEEEEEEEEE-----EE------S
T ss_pred ----CCCCcEEEEECChHHhc------CCCcEEEEC----CcHhHHHHHHHHHHHcCCCCEEEEEE-----ee------c
Confidence 01124788999988752 689999863 33333478999999999999887411 10 0
Q ss_pred CcccCCCHHHHHHHHHhC-CCEEEEEe
Q 015160 349 EMSIELSLEDVKRVALHY-GFEFEKEK 374 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~-GFeii~e~ 374 (412)
. .+++.+.+.+. ||+++...
T Consensus 295 ----~--~~~~~~~l~~~~~~~i~~~~ 315 (336)
T 2yx1_A 295 ----D--FDKAIKLFEKKCDCEVLEKR 315 (336)
T ss_dssp ----S--SHHHHHHHHHHSEEEEEEEE
T ss_pred ----C--chHHHHHHHHhcCCcEEEEE
Confidence 1 34555666665 88876544
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.72 E-value=2.6e-08 Score=97.52 Aligned_cols=111 Identities=14% Similarity=0.141 Sum_probs=76.0
Q ss_pred CCCeEEEecC------CCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCc
Q 015160 189 SPPACLVPGA------GLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQL 259 (412)
Q Consensus 189 ~~~rVLvPGC------GlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~ql 259 (412)
++.+|||+|| |+|. ..++++ +..|+|+|+|.. + .
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-------~--------------------------- 105 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-------S--------------------------- 105 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-------C---------------------------
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-------C---------------------------
Confidence 5679999999 4466 333433 479999999984 0 0
Q ss_pred cccccCCCCCCCCCCCCceeE-EecccccccCCCCCCCCccEEEEeccc--------CC---hhhHHHHHHHHHHhccCC
Q 015160 260 RPVSIPDIHPASAGITEGFSM-CGGDFVEVYSDPSQVGAWDAVVTCFFI--------DT---AHNIVEYIEIISRILKDG 327 (412)
Q Consensus 260 r~v~iPDv~p~~~~~~~~~s~-~~GDF~ely~~~~~~~~fD~VvT~FFI--------Dt---a~Ni~~yl~~I~~~LKPG 327 (412)
++.+ ++||++++.. .++||+|++.... +. ..-+.+.|+.++++||||
T Consensus 106 -----------------~v~~~i~gD~~~~~~----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpG 164 (290)
T 2xyq_A 106 -----------------DADSTLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALG 164 (290)
T ss_dssp -----------------SSSEEEESCGGGCCC----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEE
T ss_pred -----------------CCEEEEECccccCCc----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 1456 8899987532 3689999986431 11 222457899999999999
Q ss_pred cEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 328 GVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 328 G~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
|.++-.. +.. -..+++..++++.||..++.
T Consensus 165 G~~v~~~---~~~-------------~~~~~l~~~l~~~GF~~v~~ 194 (290)
T 2xyq_A 165 GSIAVKI---TEH-------------SWNADLYKLMGHFSWWTAFV 194 (290)
T ss_dssp EEEEEEE---CSS-------------SCCHHHHHHHTTEEEEEEEE
T ss_pred cEEEEEE---ecc-------------CCHHHHHHHHHHcCCcEEEE
Confidence 9998521 110 12258999999999986553
No 245
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.64 E-value=2.4e-07 Score=94.93 Aligned_cols=131 Identities=14% Similarity=0.061 Sum_probs=86.7
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||++ | ..|+|+|+|..|+..++..+... +
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~--------------------------g---- 308 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM--------------------------G---- 308 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT--------------------------T----
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc--------------------------C----
Confidence 5679999999999999999985 3 68999999999997665322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---ccCCh---------hhH-------HHHHHHHHHh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FIDTA---------HNI-------VEYIEIISRI 323 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT---~F---FIDta---------~Ni-------~~yl~~I~~~ 323 (412)
..++.++.+|+.++.. ....++||+|+. |. .+... .++ .+.|+.+.++
T Consensus 309 ---------~~~v~~~~~D~~~~~~-~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 378 (450)
T 2yxl_A 309 ---------IKIVKPLVKDARKAPE-IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARL 378 (450)
T ss_dssp ---------CCSEEEECSCTTCCSS-SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTT
T ss_pred ---------CCcEEEEEcChhhcch-hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0136778889877532 012368999986 21 22211 222 5789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhC-CCEEEE
Q 015160 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY-GFEFEK 372 (412)
Q Consensus 324 LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~-GFeii~ 372 (412)
|||||++|-...-+. -+=..+.+..++++. ||+++.
T Consensus 379 LkpGG~lvy~tcs~~-------------~~ene~~v~~~l~~~~~~~~~~ 415 (450)
T 2yxl_A 379 VKPGGRLLYTTCSIF-------------KEENEKNIRWFLNVHPEFKLVP 415 (450)
T ss_dssp EEEEEEEEEEESCCC-------------GGGTHHHHHHHHHHCSSCEECC
T ss_pred cCCCcEEEEEeCCCC-------------hhhHHHHHHHHHHhCCCCEEee
Confidence 999999983211100 012345677777765 788765
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.63 E-value=1.3e-07 Score=95.39 Aligned_cols=100 Identities=12% Similarity=0.171 Sum_probs=73.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC----------------------------------------CeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLG----------------------------------------FISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G----------------------------------------f~V~GnD~S~~ML~~s~ 228 (412)
++.+|||||||+|.++.++|..| ..|+|+|+|..|+..|+
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 45789999999999999999886 46999999999998887
Q ss_pred hhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc
Q 015160 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 306 (412)
Q Consensus 229 filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FF 306 (412)
..+... + ....+.+.++|+.++.. .++||+|++. |.
T Consensus 275 ~Na~~~--------------------------g------------l~~~i~~~~~D~~~l~~----~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 275 ENAEIA--------------------------G------------VDEYIEFNVGDATQFKS----EDEFGFIITNPPYG 312 (385)
T ss_dssp HHHHHH--------------------------T------------CGGGEEEEECCGGGCCC----SCBSCEEEECCCCC
T ss_pred HHHHHc--------------------------C------------CCCceEEEECChhhcCc----CCCCcEEEECCCCc
Confidence 332110 0 11237899999998743 3689999986 43
Q ss_pred --cCChhhHHHHHHHHHHhccC--CcEE
Q 015160 307 --IDTAHNIVEYIEIISRILKD--GGVW 330 (412)
Q Consensus 307 --IDta~Ni~~yl~~I~~~LKP--GG~w 330 (412)
+....++.+..+.+.+.||+ ||..
T Consensus 313 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~ 340 (385)
T 3ldu_A 313 ERLEDKDSVKQLYKELGYAFRKLKNWSY 340 (385)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTSBSCEE
T ss_pred CccCCHHHHHHHHHHHHHHHhhCCCCEE
Confidence 33345677778888888887 4443
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.61 E-value=1.8e-07 Score=94.86 Aligned_cols=101 Identities=10% Similarity=0.112 Sum_probs=73.1
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----------------------------------------V~GnD~S~~ML~~s~ 228 (412)
++..||||+||+|.++.|.|..+.. |+|+|+|..|+..|+
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999999987653 999999999998877
Q ss_pred hhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc
Q 015160 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 306 (412)
Q Consensus 229 filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FF 306 (412)
--+... ...+.+.+.++|+.++.. .++||+|++. |.
T Consensus 281 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~~~~----~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 281 QNAVEA--------------------------------------GLGDLITFRQLQVADFQT----EDEYGVVVANPPYG 318 (393)
T ss_dssp HHHHHT--------------------------------------TCTTCSEEEECCGGGCCC----CCCSCEEEECCCCC
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHhCCC----CCCCCEEEECCCCc
Confidence 322110 011237889999998643 3589999998 54
Q ss_pred c--CChhhHHHHHHHHHHhccC--CcEEE
Q 015160 307 I--DTAHNIVEYIEIISRILKD--GGVWI 331 (412)
Q Consensus 307 I--Dta~Ni~~yl~~I~~~LKP--GG~wI 331 (412)
. .....+.+..+.+.+.||+ ||...
T Consensus 319 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 319 ERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred cccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 3 2334566777777778876 55443
No 248
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.60 E-value=9.4e-08 Score=93.16 Aligned_cols=156 Identities=12% Similarity=0.023 Sum_probs=102.4
Q ss_pred ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccc
Q 015160 163 GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEW 240 (412)
Q Consensus 163 G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~ 240 (412)
...||-.+|.++-..+-..++ ...+|||+|||+|=|+.-++.. ...+.|+|++..|+.+++-.+...
T Consensus 111 STreRLp~lD~fY~~i~~~i~-----~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~------ 179 (281)
T 3lcv_B 111 STRERLPHLDEFYRELFRHLP-----RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL------ 179 (281)
T ss_dssp HHHHHGGGHHHHHHHHGGGSC-----CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT------
T ss_pred CHHHHhHhHHHHHHHHHhccC-----CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc------
Confidence 457888888888888877764 3569999999999999999887 358999999999998877444210
Q ss_pred cccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHH-HHHHH
Q 015160 241 NIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIV-EYIEI 319 (412)
Q Consensus 241 ~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~-~yl~~ 319 (412)
+ ...++..+|+..-. ..+.||+|+..--|...++-. ...-.
T Consensus 180 --------------------g--------------~~~~~~v~D~~~~~----p~~~~DvaL~lkti~~Le~q~kg~g~~ 221 (281)
T 3lcv_B 180 --------------------N--------------VPHRTNVADLLEDR----LDEPADVTLLLKTLPCLETQQRGSGWE 221 (281)
T ss_dssp --------------------T--------------CCEEEEECCTTTSC----CCSCCSEEEETTCHHHHHHHSTTHHHH
T ss_pred --------------------C--------------CCceEEEeeecccC----CCCCcchHHHHHHHHHhhhhhhHHHHH
Confidence 0 11567788876533 258899998754333222211 13338
Q ss_pred HHHhccCCcEEEEecCcchhhhhccCCCCCccc-CCCHHHHHHHHHhCCCEEEEEe
Q 015160 320 ISRILKDGGVWINLGPLLYHFADLYGQEDEMSI-ELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 320 I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~i-eLS~EEL~~ll~~~GFeii~e~ 374 (412)
+...|+|||++||+.- ....|..+ .+ +.=.+..++.+...|+.+.+..
T Consensus 222 ll~aL~~~~vvVSfp~-----ksl~Grs~--gm~~~Y~~~~e~~~~~~g~~~~~~~ 270 (281)
T 3lcv_B 222 VIDIVNSPNIVVTFPT-----KSLGQRSK--GMFQNYSQSFESQARERSCRIQRLE 270 (281)
T ss_dssp HHHHSSCSEEEEEEEC-----C---------CHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHhCCCCEEEeccc-----hhhcCCCc--chhhHHHHHHHHHHHhcCCceeeee
Confidence 9999999999999632 11112122 22 2233556666777788665543
No 249
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.58 E-value=4.7e-07 Score=91.57 Aligned_cols=101 Identities=9% Similarity=0.093 Sum_probs=75.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----------------------------------------EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI----------------------------------------SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----------------------------------------V~GnD~S~~ML~~s~ 228 (412)
++..||||+||+|.++.|.|..+.. |+|+|+|..|+..|+
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 4568999999999999999987643 999999999998877
Q ss_pred hhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cc
Q 015160 229 FILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FF 306 (412)
Q Consensus 229 filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FF 306 (412)
..+... ...+.+.+.++|+.++.. .++||+|++. |-
T Consensus 274 ~Na~~~--------------------------------------gl~~~I~~~~~D~~~l~~----~~~fD~Iv~NPPYG 311 (384)
T 3ldg_A 274 KNAREV--------------------------------------GLEDVVKLKQMRLQDFKT----NKINGVLISNPPYG 311 (384)
T ss_dssp HHHHHT--------------------------------------TCTTTEEEEECCGGGCCC----CCCSCEEEECCCCT
T ss_pred HHHHHc--------------------------------------CCCCceEEEECChHHCCc----cCCcCEEEECCchh
Confidence 332110 111237899999998743 3589999998 53
Q ss_pred --cCChhhHHHHHHHHHHhccC--CcEEE
Q 015160 307 --IDTAHNIVEYIEIISRILKD--GGVWI 331 (412)
Q Consensus 307 --IDta~Ni~~yl~~I~~~LKP--GG~wI 331 (412)
+....++.+..+.+.+.||+ ||...
T Consensus 312 ~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 312 ERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp TTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred hccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 55556788888888888887 65543
No 250
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.56 E-value=2.5e-07 Score=95.81 Aligned_cols=130 Identities=16% Similarity=0.067 Sum_probs=87.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... ++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~--------------------------g~--- 155 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW--------------------------GV--- 155 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------TC---
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5679999999999999999986 358999999999997665322110 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---c---ccCChhhH----------------HHHHHHHHHh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---F---FIDTAHNI----------------VEYIEIISRI 323 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---F---FIDta~Ni----------------~~yl~~I~~~ 323 (412)
.++.++.+|..++.. ...+.||+|+.- . .+...+++ .+.|+.+.++
T Consensus 156 ----------~nv~v~~~Da~~l~~--~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 223 (456)
T 3m4x_A 156 ----------SNAIVTNHAPAELVP--HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKM 223 (456)
T ss_dssp ----------SSEEEECCCHHHHHH--HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHT
T ss_pred ----------CceEEEeCCHHHhhh--hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 136778888877532 114789999862 1 11111111 2679999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 324 LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
|||||++|-.. ..+ .-+=..+.+..++++.||+++.
T Consensus 224 LkpGG~LvYsT-Cs~------------~~eEne~vv~~~l~~~~~~l~~ 259 (456)
T 3m4x_A 224 LKNKGQLIYST-CTF------------APEENEEIISWLVENYPVTIEE 259 (456)
T ss_dssp EEEEEEEEEEE-SCC------------CGGGTHHHHHHHHHHSSEEEEC
T ss_pred cCCCcEEEEEE-eec------------ccccCHHHHHHHHHhCCCEEEe
Confidence 99999998311 000 0122456778888889988775
No 251
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.56 E-value=3.4e-07 Score=89.68 Aligned_cols=85 Identities=14% Similarity=0.045 Sum_probs=62.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+++.+.+.+... ++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+..
T Consensus 38 i~~~Iv~~l~~~---~~~~VLEIG~G~G~lT~~La~~~~~V~aVEid~~li~~a~~~~~~-------------------- 94 (295)
T 3gru_A 38 FVNKAVESANLT---KDDVVLEIGLGKGILTEELAKNAKKVYVIEIDKSLEPYANKLKEL-------------------- 94 (295)
T ss_dssp HHHHHHHHTTCC---TTCEEEEECCTTSHHHHHHHHHSSEEEEEESCGGGHHHHHHHHHH--------------------
T ss_pred HHHHHHHhcCCC---CcCEEEEECCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHHhcc--------------------
Confidence 444444444322 567999999999999999999999999999999999766522210
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF 305 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F 305 (412)
..++.++.||+.++.. ....||+|+.+.
T Consensus 95 ---------------------~~~v~vi~gD~l~~~~---~~~~fD~Iv~Nl 122 (295)
T 3gru_A 95 ---------------------YNNIEIIWGDALKVDL---NKLDFNKVVANL 122 (295)
T ss_dssp ---------------------CSSEEEEESCTTTSCG---GGSCCSEEEEEC
T ss_pred ---------------------CCCeEEEECchhhCCc---ccCCccEEEEeC
Confidence 0237889999998643 235799999773
No 252
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.54 E-value=5.6e-07 Score=92.03 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=67.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..||+.|..|+|+|+|..|+..|+..+.. + .
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~~~~V~gvD~s~~ai~~A~~n~~~----n----------------------g------- 336 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEI----N----------------------N------- 336 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH----H----------------------T-------
T ss_pred CCCEEEEeeccchHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHH----c----------------------C-------
Confidence 456999999999999999999999999999999999877632210 0 0
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecc-cCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFF-IDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FF-IDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
. . +.+..+|+.++.. .+||+|+..-- -.. ....++.+. .|||||+++-
T Consensus 337 -----l-~-v~~~~~d~~~~~~-----~~fD~Vv~dPPr~g~---~~~~~~~l~-~l~p~givyv 385 (425)
T 2jjq_A 337 -----V-D-AEFEVASDREVSV-----KGFDTVIVDPPRAGL---HPRLVKRLN-REKPGVIVYV 385 (425)
T ss_dssp -----C-C-EEEEECCTTTCCC-----TTCSEEEECCCTTCS---CHHHHHHHH-HHCCSEEEEE
T ss_pred -----C-c-EEEEECChHHcCc-----cCCCEEEEcCCccch---HHHHHHHHH-hcCCCcEEEE
Confidence 0 1 5789999888632 28999987321 111 123555554 4999998863
No 253
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.52 E-value=2.5e-07 Score=94.02 Aligned_cols=130 Identities=15% Similarity=0.050 Sum_probs=85.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||+|||+|..+..||+++ ..|+|+|+|..|+..++-.+... ++
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~--------------------------g~---- 295 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL--------------------------GM---- 295 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT--------------------------TC----
T ss_pred CcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc--------------------------CC----
Confidence 56799999999999999999986 58999999999997655322110 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---ccCC---------hhhH-------HHHHHHHHHhc
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FIDT---------AHNI-------VEYIEIISRIL 324 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT---~F---FIDt---------a~Ni-------~~yl~~I~~~L 324 (412)
++.+..+|+.++... ...++||+|+. |. .+.. ..++ .+.++.+.++|
T Consensus 296 ----------~~~~~~~D~~~~~~~-~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 296 ----------KATVKQGDGRYPSQW-CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHL 364 (429)
T ss_dssp ----------CCEEEECCTTCTHHH-HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGE
T ss_pred ----------CeEEEeCchhhchhh-cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 145678888765310 11368999986 32 1211 1222 47799999999
Q ss_pred cCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHh-CCCEEEE
Q 015160 325 KDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALH-YGFEFEK 372 (412)
Q Consensus 325 KPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~-~GFeii~ 372 (412)
||||++|-...-+.. +=..+.+..++++ -+|+++.
T Consensus 365 kpGG~lvystcs~~~-------------~ene~~v~~~l~~~~~~~~~~ 400 (429)
T 1sqg_A 365 KTGGTLVYATCSVLP-------------EENSLQIKAFLQRTADAELCE 400 (429)
T ss_dssp EEEEEEEEEESCCCG-------------GGTHHHHHHHHHHCTTCEECS
T ss_pred CCCCEEEEEECCCCh-------------hhHHHHHHHHHHhCCCCEEeC
Confidence 999999842211100 1134566777765 4788764
No 254
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.51 E-value=1.7e-07 Score=97.31 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=72.6
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... +
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~--------------------------g---- 166 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC--------------------------G---- 166 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH--------------------------T----
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------C----
Confidence 5679999999999999999986 368999999999997666322110 0
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---ccC---------Chhh-------HHHHHHHHHHh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FID---------TAHN-------IVEYIEIISRI 323 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT---~F---FID---------ta~N-------i~~yl~~I~~~ 323 (412)
..++.++.+|+.++.. ...+.||+|+. |. .+. +..+ ..+.|+.+.++
T Consensus 167 ---------~~nv~~~~~D~~~~~~--~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~ 235 (479)
T 2frx_A 167 ---------ISNVALTHFDGRVFGA--AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHA 235 (479)
T ss_dssp ---------CCSEEEECCCSTTHHH--HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCcEEEEeCCHHHhhh--hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHh
Confidence 0136778889887532 01468999987 32 111 1111 23678999999
Q ss_pred ccCCcEEEE
Q 015160 324 LKDGGVWIN 332 (412)
Q Consensus 324 LKPGG~wIN 332 (412)
|||||++|-
T Consensus 236 LkpGG~Lvy 244 (479)
T 2frx_A 236 LRPGGTLVY 244 (479)
T ss_dssp EEEEEEEEE
T ss_pred cCCCCEEEE
Confidence 999999983
No 255
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.49 E-value=7.2e-07 Score=86.27 Aligned_cols=97 Identities=14% Similarity=0.041 Sum_probs=67.4
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+++.|-+..... ++ +|||+|||+|.++..|+++|..|+|+|+|..|+..++-.+
T Consensus 35 i~~~Iv~~~~~~---~~-~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~---------------------- 88 (271)
T 3fut_A 35 HLRRIVEAARPF---TG-PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETL---------------------- 88 (271)
T ss_dssp HHHHHHHHHCCC---CS-CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHT----------------------
T ss_pred HHHHHHHhcCCC---CC-eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc----------------------
Confidence 555555444322 46 9999999999999999999999999999999997654111
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec--ccCChhhHHHHHHH
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF--FIDTAHNIVEYIEI 319 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F--FIDta~Ni~~yl~~ 319 (412)
+ ..++.++.||+.++.. + ....+|.||++. +|.+. -+.++++.
T Consensus 89 -----------~---------~~~v~vi~~D~l~~~~-~-~~~~~~~iv~NlPy~iss~-il~~ll~~ 133 (271)
T 3fut_A 89 -----------S---------GLPVRLVFQDALLYPW-E-EVPQGSLLVANLPYHIATP-LVTRLLKT 133 (271)
T ss_dssp -----------T---------TSSEEEEESCGGGSCG-G-GSCTTEEEEEEECSSCCHH-HHHHHHHH
T ss_pred -----------C---------CCCEEEEECChhhCCh-h-hccCccEEEecCcccccHH-HHHHHhcC
Confidence 0 0237899999988643 1 113689998874 56443 35555554
No 256
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.46 E-value=1.9e-07 Score=96.96 Aligned_cols=129 Identities=13% Similarity=0.020 Sum_probs=85.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||+|||+|..+..||++ +-.|+|+|+|..|+..++-.+... ++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~--------------------------G~--- 151 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW--------------------------GA--- 151 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH--------------------------CC---
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc--------------------------CC---
Confidence 5679999999999999999976 248999999999997666322110 00
Q ss_pred CCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec---cc---------CChhhH-------HHHHHHHHHh
Q 015160 266 DIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF---FI---------DTAHNI-------VEYIEIISRI 323 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT---~F---FI---------Dta~Ni-------~~yl~~I~~~ 323 (412)
. +.++.+|+.++.. ...++||+|+. |. .+ .+..++ .+.|+.+.++
T Consensus 152 ----------~-v~~~~~Da~~l~~--~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~ 218 (464)
T 3m6w_A 152 ----------P-LAVTQAPPRALAE--AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRL 218 (464)
T ss_dssp ----------C-CEEECSCHHHHHH--HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTT
T ss_pred ----------e-EEEEECCHHHhhh--hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 1 4677888877531 01478999985 21 11 111222 6789999999
Q ss_pred ccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhC-CCEEEE
Q 015160 324 LKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHY-GFEFEK 372 (412)
Q Consensus 324 LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~-GFeii~ 372 (412)
|||||++|-.. ..++ -+=..+.+..++++. +|+++.
T Consensus 219 LkpGG~LvysT-Cs~~------------~eEne~vv~~~l~~~~~~~l~~ 255 (464)
T 3m6w_A 219 LGPGGVLVYST-CTFA------------PEENEGVVAHFLKAHPEFRLED 255 (464)
T ss_dssp EEEEEEEEEEE-SCCC------------GGGTHHHHHHHHHHCTTEEEEC
T ss_pred cCCCcEEEEEe-ccCc------------hhcCHHHHHHHHHHCCCcEEEe
Confidence 99999998311 0010 122456677777776 688775
No 257
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.45 E-value=1.2e-06 Score=89.18 Aligned_cols=124 Identities=14% Similarity=0.097 Sum_probs=80.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+|||+|.++..||+++..|+|+|+|..|+..|+..+.. + .
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~~~~V~gvD~s~~al~~A~~n~~~----~----------------------~------- 332 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARL----N----------------------G------- 332 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTTSSEEEEEESCHHHHHHHHHHHHH----T----------------------T-------
T ss_pred CCCEEEECCCCCCHHHHHHHhhCCEEEEEeCCHHHHHHHHHHHHH----c----------------------C-------
Confidence 456999999999999999999999999999999999877632210 0 0
Q ss_pred CCCCCCCCceeEEecccccccC-CCCCCCCccEEEEec-ccCChhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhccC
Q 015160 269 PASAGITEGFSMCGGDFVEVYS-DPSQVGAWDAVVTCF-FIDTAHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLYG 345 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~-~~~~~~~fD~VvT~F-FIDta~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~~g 345 (412)
..++.+..+|+.+... .+...++||+|+..- +.. ..+.++.+.+ ++|++++.- ..|-
T Consensus 333 ------~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g----~~~~~~~l~~-~~p~~ivyvsc~p~--------- 392 (433)
T 1uwv_A 333 ------LQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAG----AAGVMQQIIK-LEPIRIVYVSCNPA--------- 392 (433)
T ss_dssp ------CCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTC----CHHHHHHHHH-HCCSEEEEEESCHH---------
T ss_pred ------CCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCcc----HHHHHHHHHh-cCCCeEEEEECChH---------
Confidence 0137889999887422 112246899998632 211 1234455443 788887642 2221
Q ss_pred CCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 346 QEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 346 ~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
.| ..++. ++.+.||++.+..
T Consensus 393 -------tl-ard~~-~l~~~Gy~~~~~~ 412 (433)
T 1uwv_A 393 -------TL-ARDSE-ALLKAGYTIARLA 412 (433)
T ss_dssp -------HH-HHHHH-HHHHTTCEEEEEE
T ss_pred -------HH-HhhHH-HHHHCCcEEEEEE
Confidence 11 12344 4456799998744
No 258
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.39 E-value=7.5e-06 Score=82.78 Aligned_cols=65 Identities=26% Similarity=0.357 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHhccCCcEEEE--ecC-----c-------ch-h-----hhhc--cCC--------CCCcccCCCHHHHHH
Q 015160 312 NIVEYIEIISRILKDGGVWIN--LGP-----L-------LY-H-----FADL--YGQ--------EDEMSIELSLEDVKR 361 (412)
Q Consensus 312 Ni~~yl~~I~~~LKPGG~wIN--~GP-----L-------ly-h-----~~~~--~g~--------~~~~~ieLS~EEL~~ 361 (412)
|...+|+.+++.|||||.+|- .|. . +| . +.+. .|. -....+..|.+|++.
T Consensus 203 D~~~fL~~ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~ 282 (374)
T 3b5i_A 203 DLAEFLRARAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKE 282 (374)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHH
Confidence 455679999999999999983 221 1 11 1 1111 111 011245679999999
Q ss_pred HHH-hCCCEEEEEeec
Q 015160 362 VAL-HYGFEFEKEKTI 376 (412)
Q Consensus 362 ll~-~~GFeii~e~~i 376 (412)
+++ ..||+|.+.+..
T Consensus 283 ~l~~~~~F~I~~le~~ 298 (374)
T 3b5i_A 283 VVDANGSFAIDKLVVY 298 (374)
T ss_dssp HHHHHCSEEEEEEEEE
T ss_pred HHHhcCCcEEEEEEEE
Confidence 998 599999886543
No 259
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.39 E-value=5.7e-07 Score=90.80 Aligned_cols=113 Identities=15% Similarity=0.181 Sum_probs=74.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+||++|||+|.++.++++++- .|+++|++..|+..|+--+. ... .+ .+. |
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~------------~l~--~~---------~l~--d- 241 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMR------------KTC--GD---------VLD--N- 241 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCC------------C---------------CCS--S-
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH------------Hhc--cc---------ccc--c-
Confidence 567999999999999999999874 69999999999987762211 000 00 000 0
Q ss_pred CCCCCCCCCceeEEecccccccCCC-CCCCCccEEEEeccc-CC--hh-hH--HHHHHHH----HHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDP-SQVGAWDAVVTCFFI-DT--AH-NI--VEYIEII----SRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~-~~~~~fD~VvT~FFI-Dt--a~-Ni--~~yl~~I----~~~LKPGG~wIN 332 (412)
+...++.++.+|.+++-... ...++||+|+.-.+- .. .+ .+ .++++.+ .++|||||+++.
T Consensus 242 -----p~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~ 312 (364)
T 2qfm_A 242 -----LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 312 (364)
T ss_dssp -----SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred -----cCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEE
Confidence 00125889999998854200 014689999876432 21 11 11 4666776 899999999985
No 260
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.38 E-value=9.7e-07 Score=84.44 Aligned_cols=40 Identities=13% Similarity=-0.065 Sum_probs=37.0
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+|||+|||+|.++..|+++|..|+|+|+|..|+..++
T Consensus 29 ~~~~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~ 68 (255)
T 3tqs_A 29 KTDTLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQ 68 (255)
T ss_dssp TTCEEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHH
T ss_pred CcCEEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHH
Confidence 5679999999999999999999999999999999997655
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.35 E-value=7.6e-07 Score=88.67 Aligned_cols=110 Identities=9% Similarity=-0.008 Sum_probs=72.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
+++.+.+.... .+.+|||+|||+|.++..||+.+..|+|+|+|..|+..|+..+.. +
T Consensus 202 l~~~~~~~~~~----~~~~vLDl~cG~G~~~l~la~~~~~V~gvd~~~~ai~~a~~n~~~----n--------------- 258 (369)
T 3bt7_A 202 MLEWALDVTKG----SKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAA----N--------------- 258 (369)
T ss_dssp HHHHHHHHTTT----CCSEEEEESCTTSHHHHHHGGGSSEEEEECCCHHHHHHHHHHHHH----T---------------
T ss_pred HHHHHHHHhhc----CCCEEEEccCCCCHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHH----c---------------
Confidence 44444444432 245899999999999999999888999999999999877632210 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccC-CCCC------------CCCccEEEEecccCChhhHHHHHHHH
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYS-DPSQ------------VGAWDAVVTCFFIDTAHNIVEYIEII 320 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~-~~~~------------~~~fD~VvT~FFIDta~Ni~~yl~~I 320 (412)
+ ..++.+..+|+.++.. .+.. .+.||+|+. |.... .+.+.+
T Consensus 259 -------g-------------~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~----dPPr~--g~~~~~ 312 (369)
T 3bt7_A 259 -------H-------------IDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV----DPPRS--GLDSET 312 (369)
T ss_dssp -------T-------------CCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE----CCCTT--CCCHHH
T ss_pred -------C-------------CCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE----CcCcc--ccHHHH
Confidence 0 0136788888776421 0000 137999964 54321 234567
Q ss_pred HHhccCCcEEEE
Q 015160 321 SRILKDGGVWIN 332 (412)
Q Consensus 321 ~~~LKPGG~wIN 332 (412)
.+.|++||.+|-
T Consensus 313 ~~~l~~~g~ivy 324 (369)
T 3bt7_A 313 EKMVQAYPRILY 324 (369)
T ss_dssp HHHHTTSSEEEE
T ss_pred HHHHhCCCEEEE
Confidence 777889998874
No 262
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.31 E-value=7.2e-07 Score=89.96 Aligned_cols=112 Identities=11% Similarity=-0.045 Sum_probs=72.8
Q ss_pred CCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
+.+|||+|||+|.++..+|++ | -.|++||++..++..++.-+..... .+..|+-
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~------------------------~~~~~~~ 103 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFD------------------------GELRESK 103 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCC------------------------SCCEECS
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcc------------------------ccccccc
Confidence 458999999999999999998 4 5799999999999777633321100 0000000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
.........++.++.+|..++... ..+.||+|+ +|..-...++++...++|||||+++
T Consensus 104 ~~~~~~gl~~i~v~~~Da~~~~~~--~~~~fD~I~----lDP~~~~~~~l~~a~~~lk~gG~l~ 161 (378)
T 2dul_A 104 GRAILKGEKTIVINHDDANRLMAE--RHRYFHFID----LDPFGSPMEFLDTALRSAKRRGILG 161 (378)
T ss_dssp SEEEEESSSEEEEEESCHHHHHHH--STTCEEEEE----ECCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred ccccccCCCceEEEcCcHHHHHHh--ccCCCCEEE----eCCCCCHHHHHHHHHHhcCCCCEEE
Confidence 000000011278899998875321 135799998 3433234588999999999999775
No 263
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.30 E-value=1.7e-06 Score=91.08 Aligned_cols=123 Identities=16% Similarity=0.108 Sum_probs=78.0
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc--------------------CCeEEEEeCCHHHHHHHHhhhhc
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL--------------------GFISQGNEFSYYMMICSSFILNH 233 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~--------------------Gf~V~GnD~S~~ML~~s~filn~ 233 (412)
+++.|.+.+.. .++.+|||||||+|.+...+++. ...+.|+|++..|+..|+..+..
T Consensus 157 iv~~mv~~l~p---~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l 233 (541)
T 2ar0_A 157 LIKTIIHLLKP---QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLL 233 (541)
T ss_dssp HHHHHHHHHCC---CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcc---CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHH
Confidence 44554444321 25679999999999998887754 24799999999999877743210
Q ss_pred ccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC---
Q 015160 234 TETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--- 308 (412)
Q Consensus 234 ~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID--- 308 (412)
|...+. |+ ....+..||++.... ...+.||+|+++ |-..
T Consensus 234 -------------~gi~~~------------~~---------~~~~I~~gDtL~~~~--~~~~~fD~Vv~NPPf~~~~~~ 277 (541)
T 2ar0_A 234 -------------HDIEGN------------LD---------HGGAIRLGNTLGSDG--ENLPKAHIVATNPPFGSAAGT 277 (541)
T ss_dssp -------------TTCCCB------------GG---------GTBSEEESCTTSHHH--HTSCCEEEEEECCCCTTCSSC
T ss_pred -------------hCCCcc------------cc---------ccCCeEeCCCccccc--ccccCCeEEEECCCcccccch
Confidence 000000 00 114678888775421 124689999987 3211
Q ss_pred ---------ChhhHHHHHHHHHHhccCCcEEEEecC
Q 015160 309 ---------TAHNIVEYIEIISRILKDGGVWINLGP 335 (412)
Q Consensus 309 ---------ta~Ni~~yl~~I~~~LKPGG~wIN~GP 335 (412)
+...-..++..+.+.|||||+++-+-|
T Consensus 278 ~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 278 NITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 111124789999999999999886544
No 264
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.28 E-value=9.4e-07 Score=95.02 Aligned_cols=118 Identities=23% Similarity=0.200 Sum_probs=79.7
Q ss_pred chHH-HHHHHHhhCCCCCC-CCCCeEEEecCCCChh---HHHHHHcC-C--eEEEEeCCHHHHHHHHhhhhccccccccc
Q 015160 170 CYKP-ILEELDALFPNRSK-ESPPACLVPGAGLGRL---ALEISHLG-F--ISQGNEFSYYMMICSSFILNHTETAGEWN 241 (412)
Q Consensus 170 ~y~p-Il~~L~~~~p~~~~-~~~~rVLvPGCGlGRL---a~eLA~~G-f--~V~GnD~S~~ML~~s~filn~~~~~~~~~ 241 (412)
.|.. |...|....+.... .....|||+|||+|-| +...++++ - +|.|+|-|. |...+..+.+. +.
T Consensus 336 ~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~----N~-- 408 (637)
T 4gqb_A 336 QYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQF----EE-- 408 (637)
T ss_dssp HHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHH----HT--
T ss_pred HHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHh----cc--
Confidence 4444 44556655543221 1345799999999999 44444443 2 589999997 65555544321 11
Q ss_pred ccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe---cccCChhhHHHHHH
Q 015160 242 IYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC---FFIDTAHNIVEYIE 318 (412)
Q Consensus 242 I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~---FFIDta~Ni~~yl~ 318 (412)
..+.+.++.||++++.. .++.|+||+= +|++-.. ..+.|.
T Consensus 409 --------------------------------~~dkVtVI~gd~eev~L----PEKVDIIVSEwMG~fLl~E~-mlevL~ 451 (637)
T 4gqb_A 409 --------------------------------WGSQVTVVSSDMREWVA----PEKADIIVSELLGSFADNEL-SPECLD 451 (637)
T ss_dssp --------------------------------TGGGEEEEESCTTTCCC----SSCEEEEECCCCBTTBGGGC-HHHHHH
T ss_pred --------------------------------CCCeEEEEeCcceeccC----CcccCEEEEEcCcccccccC-CHHHHH
Confidence 12348899999999864 3789999986 4666553 558888
Q ss_pred HHHHhccCCcEEE
Q 015160 319 IISRILKDGGVWI 331 (412)
Q Consensus 319 ~I~~~LKPGG~wI 331 (412)
...|.|||||+.|
T Consensus 452 Ardr~LKPgGimi 464 (637)
T 4gqb_A 452 GAQHFLKDDGVSI 464 (637)
T ss_dssp HHGGGEEEEEEEE
T ss_pred HHHHhcCCCcEEc
Confidence 8899999999998
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.28 E-value=5e-06 Score=90.11 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=71.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--------------------------------------------CeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--------------------------------------------FISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--------------------------------------------f~V~GnD~S~~ML 224 (412)
++..||||+||+|.++.+.|..+ ..+.|+|++..|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 45689999999999999999764 4799999999999
Q ss_pred HHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe
Q 015160 225 ICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC 304 (412)
Q Consensus 225 ~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~ 304 (412)
..|+.-+..+ ...+.+.+.++|+.++.. |...+.||+||++
T Consensus 270 ~~A~~N~~~a--------------------------------------gv~~~i~~~~~D~~~~~~-~~~~~~~d~Iv~N 310 (703)
T 3v97_A 270 QRARTNARLA--------------------------------------GIGELITFEVKDVAQLTN-PLPKGPYGTVLSN 310 (703)
T ss_dssp HHHHHHHHHT--------------------------------------TCGGGEEEEECCGGGCCC-SCTTCCCCEEEEC
T ss_pred HHHHHHHHHc--------------------------------------CCCCceEEEECChhhCcc-ccccCCCCEEEeC
Confidence 8887332110 111237899999998643 2223489999998
Q ss_pred --cc--cCChhhHHHHHHHHH---HhccCCcEEE
Q 015160 305 --FF--IDTAHNIVEYIEIIS---RILKDGGVWI 331 (412)
Q Consensus 305 --FF--IDta~Ni~~yl~~I~---~~LKPGG~wI 331 (412)
|- +....++.+..+.+. +.++|||...
T Consensus 311 PPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 311 PPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp CCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 53 444445555555554 4455788775
No 266
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.28 E-value=8.6e-06 Score=85.88 Aligned_cols=155 Identities=12% Similarity=0.049 Sum_probs=90.3
Q ss_pred CeEEEecCCCChhHHHHHHc-----------------CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 191 PACLVPGAGLGRLALEISHL-----------------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~-----------------Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
.+||||+||+|.+...+++. ...+.|+|++..|+..|+.-+-. |
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l-------------~------ 306 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVI-------------R------ 306 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHH-------------T------
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHH-------------h------
Confidence 49999999999998776542 45799999999999877733210 0
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC-----------------------
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID----------------------- 308 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID----------------------- 308 (412)
++. .++.+..||.+.... ....+||+||++ |-..
T Consensus 307 -------gi~------------~~i~i~~gDtL~~~~--~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~ 365 (544)
T 3khk_A 307 -------GID------------FNFGKKNADSFLDDQ--HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRI 365 (544)
T ss_dssp -------TCC------------CBCCSSSCCTTTSCS--CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEE
T ss_pred -------CCC------------cccceeccchhcCcc--cccccccEEEECCCcCCccccchhhhhhhhhhcCccccccc
Confidence 000 012234566544321 124678888886 3221
Q ss_pred ---Chh-hHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE-EeeccccCCCC
Q 015160 309 ---TAH-NIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK-EKTIETTYTTN 383 (412)
Q Consensus 309 ---ta~-Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~-e~~i~s~Y~~d 383 (412)
... .-..+|..+.+.|||||+.+-+-|--+-+.. .-....|++.|.+.+. +.. -......+.
T Consensus 366 ~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g~L~~~----------~~~~~~iRk~Lle~~~-l~aII~LP~~lF~-- 432 (544)
T 3khk_A 366 LTPPTGNANFAWMLHMLYHLAPTGSMALLLANGSMSSN----------TNNEGEIRKTLVEQDL-VECMVALPGQLFT-- 432 (544)
T ss_dssp CCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETHHHHCC----------GGGHHHHHHHHHHTTC-EEEEEECCTTBCC--
T ss_pred ccCCCcchhHHHHHHHHHHhccCceEEEEecchhhhcC----------cchHHHHHHHHHhCCc-HhEEEECCCCCCC--
Confidence 111 1236899999999999998766553222210 1246788988877654 332 222211111
Q ss_pred cccccccccceEEEEEEEcC
Q 015160 384 PRSMMQNRYFTAFWTMRKKS 403 (412)
Q Consensus 384 ~~sm~~~~Y~~~f~VarK~~ 403 (412)
.....+..||.+|..
T Consensus 433 -----~t~i~t~Ilvl~K~k 447 (544)
T 3khk_A 433 -----NTQIPACIWFLTKDK 447 (544)
T ss_dssp -----SCSSCEEEEEEESCC
T ss_pred -----CCCCCeEEEEEecCC
Confidence 123355667777754
No 267
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.21 E-value=3.7e-06 Score=80.16 Aligned_cols=38 Identities=16% Similarity=0.008 Sum_probs=32.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe--EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI--SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~--V~GnD~S~~ML~~s~ 228 (412)
++.+|||+|||+|.++. +++ |.. |+|+|+|..|+..++
T Consensus 21 ~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~ 60 (252)
T 1qyr_A 21 KGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQ 60 (252)
T ss_dssp TTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHH
T ss_pred CcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHH
Confidence 45689999999999999 764 677 999999999997555
No 268
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.18 E-value=3.7e-05 Score=81.11 Aligned_cols=132 Identities=15% Similarity=0.099 Sum_probs=85.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc-----CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL-----GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-----Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~ 263 (412)
++.+||||+||+|.+...+++. ...+.|+|++..|+..|+.-+- . .++.
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~--l------------------------~gi~ 274 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMI--L------------------------HGVP 274 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHH--H------------------------TTCC
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHH--H------------------------cCCC
Confidence 5679999999999998888776 5689999999999987763221 0 0110
Q ss_pred cCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC--------------------Chhh-HHHHHHHH
Q 015160 264 IPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--------------------TAHN-IVEYIEII 320 (412)
Q Consensus 264 iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID--------------------ta~N-i~~yl~~I 320 (412)
..++.+..||++...-+......||+||++ |-.. ...+ -..++..+
T Consensus 275 -----------~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~ 343 (542)
T 3lkd_A 275 -----------IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHG 343 (542)
T ss_dssp -----------GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHH
T ss_pred -----------cCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHH
Confidence 012567888877641001124789999987 3111 0011 12579999
Q ss_pred HHhcc-CCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCC
Q 015160 321 SRILK-DGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGF 368 (412)
Q Consensus 321 ~~~LK-PGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GF 368 (412)
.+.|| |||+..-+-|--+-+.. -....|++.|.+.+.
T Consensus 344 l~~Lk~~gGr~a~VlP~g~Lf~~-----------~~~~~iRk~Lle~~~ 381 (542)
T 3lkd_A 344 YYHLKQDNGVMAIVLPHGVLFRG-----------NAEGTIRKALLEEGA 381 (542)
T ss_dssp HHTBCTTTCEEEEEEETHHHHCC-----------THHHHHHHHHHHTTC
T ss_pred HHHhCCCceeEEEEecchHhhCC-----------chhHHHHHHHHhCCc
Confidence 99999 99999765553332210 125678888776554
No 269
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.16 E-value=9.9e-07 Score=84.36 Aligned_cols=40 Identities=23% Similarity=0.216 Sum_probs=35.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH-------HHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSY-------YMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~-------~ML~~s~ 228 (412)
++.+|||+|||+|+++..||++|..|+|+|+|. .|+..++
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~~V~~vD~s~~~~~ll~~~l~~a~ 129 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGLTVTAFEQHPAVACLLSDGIRRAL 129 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhCCEEEEEECChhhhHHHHHHHHHHH
Confidence 456899999999999999999999999999999 6765544
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.14 E-value=9.3e-06 Score=77.13 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=42.1
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcC-CeEEEEeCCHHHHHHHH
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLG-FISQGNEFSYYMMICSS 228 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~G-f~V~GnD~S~~ML~~s~ 228 (412)
+++.+-+.++.. ++.+|||+|||+|.++..|+++| ..|+|+|+|..|+..++
T Consensus 19 i~~~iv~~~~~~---~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~ 71 (249)
T 3ftd_A 19 VLKKIAEELNIE---EGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLK 71 (249)
T ss_dssp HHHHHHHHTTCC---TTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHT
T ss_pred HHHHHHHhcCCC---CcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHH
Confidence 556666555422 56799999999999999999996 89999999999986443
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.11 E-value=8.1e-06 Score=79.08 Aligned_cols=40 Identities=15% Similarity=0.030 Sum_probs=36.6
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe----EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI----SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~----V~GnD~S~~ML~~s~ 228 (412)
++.+|||+|||+|.++..|+++|.. |+|+|+|..|+..++
T Consensus 42 ~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~ 85 (279)
T 3uzu_A 42 RGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLE 85 (279)
T ss_dssp TTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHH
T ss_pred CcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHH
Confidence 5679999999999999999999988 999999999997655
No 272
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.07 E-value=4.1e-05 Score=77.76 Aligned_cols=98 Identities=22% Similarity=0.254 Sum_probs=59.2
Q ss_pred eEEecccccccCCCCCCCCccEEEEec---ccCChh-h-----------------------H-HHH-----------HHH
Q 015160 279 SMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTAH-N-----------------------I-VEY-----------IEI 319 (412)
Q Consensus 279 s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta~-N-----------------------i-~~y-----------l~~ 319 (412)
-|+.|.-..+|...++.++||+|++++ +|...+ . + ..| |+.
T Consensus 131 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 131 CLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345554445555445679999999886 333221 1 2 133 888
Q ss_pred HHHhccCCcEEEE--ecC--c--------chh--hhhc--cCC--------CCCcccCCCHHHHHHHHHhC-CCEEEEEe
Q 015160 320 ISRILKDGGVWIN--LGP--L--------LYH--FADL--YGQ--------EDEMSIELSLEDVKRVALHY-GFEFEKEK 374 (412)
Q Consensus 320 I~~~LKPGG~wIN--~GP--L--------lyh--~~~~--~g~--------~~~~~ieLS~EEL~~ll~~~-GFeii~e~ 374 (412)
.++.|||||.++- .|. . +.. +.+. .|. -....+..|.+|++.++++. ||++.+.+
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~~le 290 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEILYLE 290 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEEEEE
Confidence 9999999999984 221 1 100 1110 111 00124568999999999987 59999865
Q ss_pred ec
Q 015160 375 TI 376 (412)
Q Consensus 375 ~i 376 (412)
..
T Consensus 291 ~~ 292 (384)
T 2efj_A 291 TF 292 (384)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 273
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.06 E-value=1.4e-05 Score=78.59 Aligned_cols=108 Identities=16% Similarity=0.182 Sum_probs=76.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc-C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL-G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+||++|-|.|..+.++.+. + -.|+.+|+...++.+++.-+-. +.. + ..
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~------------~~~--~--~~----------- 135 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPN------------HNA--G--SY----------- 135 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHH------------HHT--T--GG-----------
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCcc------------ccc--c--cc-----------
Confidence 4569999999999999999987 3 5799999999999777632210 000 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEeccc--CChhhH--HHHHHHHHHhccCCcEEEE
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFI--DTAHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFI--Dta~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
...++.++.+|.+++-. ...++||+|+.=.+- ..+..+ .++++.++++|||||+++.
T Consensus 136 -------~dpRv~v~~~Dg~~~l~--~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~ 196 (294)
T 3o4f_A 136 -------DDPRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVA 196 (294)
T ss_dssp -------GCTTEEEEESCTTTTTS--CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEE
T ss_pred -------CCCcEEEEechHHHHHh--hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEE
Confidence 01348889999988654 346789999865431 112112 3789999999999999996
No 274
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.06 E-value=7.3e-06 Score=80.34 Aligned_cols=40 Identities=15% Similarity=0.050 Sum_probs=36.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+|||+|||+|.++..|+++ |..|+|+|.|..|+..|+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~ 67 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAE 67 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Confidence 5679999999999999999998 589999999999998776
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.05 E-value=5.3e-06 Score=84.30 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=70.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc--C-CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--G-FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--G-f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
++.+|||++||+|.++.++|++ | -.|++||++..++..++.-+.. +
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~----N--------------------------- 100 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL----N--------------------------- 100 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH----T---------------------------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----h---------------------------
Confidence 4569999999999999999995 5 4799999999998766522211 0
Q ss_pred CCCCCCCCCCCc-eeEEecccccccC-CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEE
Q 015160 266 DIHPASAGITEG-FSMCGGDFVEVYS-DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWI 331 (412)
Q Consensus 266 Dv~p~~~~~~~~-~s~~~GDF~ely~-~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wI 331 (412)
...++ +.++.+|..++.. . ..+.||+|+. |.-....++++.+.++|||||+++
T Consensus 101 -------gl~~~~v~v~~~Da~~~l~~~--~~~~fD~V~l----DP~g~~~~~l~~a~~~Lk~gGll~ 155 (392)
T 3axs_A 101 -------NIPEDRYEIHGMEANFFLRKE--WGFGFDYVDL----DPFGTPVPFIESVALSMKRGGILS 155 (392)
T ss_dssp -------TCCGGGEEEECSCHHHHHHSC--CSSCEEEEEE----CCSSCCHHHHHHHHHHEEEEEEEE
T ss_pred -------CCCCceEEEEeCCHHHHHHHh--hCCCCcEEEE----CCCcCHHHHHHHHHHHhCCCCEEE
Confidence 01122 6788899877532 1 1357999964 442223478999999999999776
No 276
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.05 E-value=1e-05 Score=77.46 Aligned_cols=147 Identities=17% Similarity=0.098 Sum_probs=81.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc-------C-------CeEEEEeCCH---HHHHHHHhhh----hccccccccccccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHL-------G-------FISQGNEFSY---YMMICSSFIL----NHTETAGEWNIYPWIH 247 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~-------G-------f~V~GnD~S~---~ML~~s~fil----n~~~~~~~~~I~P~i~ 247 (412)
+..+||++|+|+|..+..+++. + -.++++|..+ .||..+.... ..+++ -+..+|-
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~--l~~~w~~-- 135 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ--LQAQWPM-- 135 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHH--HHHTCCC--
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHH--HHHhccc--
Confidence 4579999999999988776542 2 3788999654 7776432100 00000 0000110
Q ss_pred ccCCCCCcccCccccccCCCCCCC-CCCCCceeEEecccccccCC-CC-CCCCccEEEEecc-cCChhh--HHHHHHHHH
Q 015160 248 SNCNSLSDSDQLRPVSIPDIHPAS-AGITEGFSMCGGDFVEVYSD-PS-QVGAWDAVVTCFF-IDTAHN--IVEYIEIIS 321 (412)
Q Consensus 248 ~~sn~~s~~~qlr~v~iPDv~p~~-~~~~~~~s~~~GDF~ely~~-~~-~~~~fD~VvT~FF-IDta~N--i~~yl~~I~ 321 (412)
.+|.+.-.. .....++.++.||+.++... +. ....||+|+---| -...+. -.++|+.++
T Consensus 136 ---------------~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~ 200 (257)
T 2qy6_A 136 ---------------PLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMA 200 (257)
T ss_dssp ---------------SCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHH
T ss_pred ---------------cccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHH
Confidence 001000000 00113478999999885321 10 0127898843211 111111 247999999
Q ss_pred HhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 322 RILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 322 ~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
++|||||+++.+.. ...+++.+..+||++.+..
T Consensus 201 ~~L~pGG~l~tysa--------------------a~~vrr~L~~aGF~v~~~~ 233 (257)
T 2qy6_A 201 RLARPGGTLATFTS--------------------AGFVRRGLQEAGFTMQKRK 233 (257)
T ss_dssp HHEEEEEEEEESCC--------------------BHHHHHHHHHHTEEEEEEC
T ss_pred HHcCCCcEEEEEeC--------------------CHHHHHHHHHCCCEEEeCC
Confidence 99999999996221 1357888889999987654
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.04 E-value=1.7e-05 Score=79.90 Aligned_cols=148 Identities=15% Similarity=0.096 Sum_probs=89.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc------------------CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 189 SPPACLVPGAGLGRLALEISHL------------------GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~------------------Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
...+|+|+||++|..++.++.. .++|..||+..-+....-..|. ++.
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~-----------~~~---- 115 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP-----------IEN---- 115 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT-----------TSC----
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc-----------hhc----
Confidence 4578999999999988776554 3678889988877532221110 000
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec---ccCCh-----------------
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF---FIDTA----------------- 310 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F---FIDta----------------- 310 (412)
.. .+--|+.|.-..+|...++.+++|+|++.+ +|...
T Consensus 116 ----~~-------------------~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~ 172 (359)
T 1m6e_X 116 ----DV-------------------DGVCFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTC 172 (359)
T ss_dssp ----SC-------------------TTCEEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSS
T ss_pred ----cc-------------------CCCEEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCC
Confidence 00 011344444334454445579999999886 33221
Q ss_pred -------------hhHHHHHHHHHHhccCCcEEEE--e-----cC------cchh-hhhc------cCC--C------CC
Q 015160 311 -------------HNIVEYIEIISRILKDGGVWIN--L-----GP------LLYH-FADL------YGQ--E------DE 349 (412)
Q Consensus 311 -------------~Ni~~yl~~I~~~LKPGG~wIN--~-----GP------Llyh-~~~~------~g~--~------~~ 349 (412)
.|...+|+..++.|||||.+|- + +| .+|. .... .|. . ..
T Consensus 173 p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~ 252 (359)
T 1m6e_X 173 PQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNI 252 (359)
T ss_dssp CCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCC
Confidence 2455669999999999999983 1 22 1231 1110 121 0 01
Q ss_pred cccCCCHHHHHHHHHhC-CCEEEEEe
Q 015160 350 MSIELSLEDVKRVALHY-GFEFEKEK 374 (412)
Q Consensus 350 ~~ieLS~EEL~~ll~~~-GFeii~e~ 374 (412)
..+..|.+|++.++++. +|++.+.+
T Consensus 253 P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 253 PQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp CCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CccCCCHHHHHHHHHHcCCceEEEEE
Confidence 24567999999999988 55888754
No 278
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.03 E-value=1e-05 Score=87.85 Aligned_cols=103 Identities=15% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCCeEEEecCCCChhHHHH--HH--cC-----------CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEI--SH--LG-----------FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSL 253 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eL--A~--~G-----------f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~ 253 (412)
....|||+|||+|-|+... |. .| ..|.|+|-|.......+.+.. +.
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-----Ng-------------- 469 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-----RT-------------- 469 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-----HT--------------
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-----cC--------------
Confidence 3467999999999996432 22 23 389999999855543332110 11
Q ss_pred CcccCccccccCCCCCCCCCCCCceeEEecccccccCC--CCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCc
Q 015160 254 SDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSD--PSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 254 s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~--~~~~~~fD~VvT~---FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
..+.+.++.||++++..+ ....++.|+||+- +|++..- ..+.|..+.+.|||||
T Consensus 470 --------------------~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL-~pe~Ld~v~r~Lkp~G 528 (745)
T 3ua3_A 470 --------------------WKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNEL-SPECLDGVTGFLKPTT 528 (745)
T ss_dssp --------------------TTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGS-HHHHHHTTGGGSCTTC
T ss_pred --------------------CCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhc-cHHHHHHHHHhCCCCc
Confidence 112378899999997531 0013789999986 4776552 4578888889999999
Q ss_pred EEE
Q 015160 329 VWI 331 (412)
Q Consensus 329 ~wI 331 (412)
+.|
T Consensus 529 i~i 531 (745)
T 3ua3_A 529 ISI 531 (745)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.01 E-value=4e-06 Score=80.59 Aligned_cols=104 Identities=13% Similarity=0.087 Sum_probs=64.8
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCC
Q 015160 191 PACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPA 270 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~ 270 (412)
.+|||+|||+|+.+++||.+|..|+|+|.|..|...++..+..+.... .+...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~~V~~vE~~~~~~~l~~~~l~~a~~~~-------------------~~~~~-------- 142 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGCRVRMLERNPVVAALLDDGLARGYADA-------------------EIGGW-------- 142 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHHHCT-------------------TTHHH--------
T ss_pred CEEEEcCCcCCHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHHHhhH-------------------hhhhh--------
Confidence 689999999999999999999999999999998766654443321100 00000
Q ss_pred CCCCCCceeEEecccccccCCCCCCCCccEEEEe-cccCChhhHHHHHHHHHHhccCCc
Q 015160 271 SAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC-FFIDTAHNIVEYIEIISRILKDGG 328 (412)
Q Consensus 271 ~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~-FFIDta~Ni~~yl~~I~~~LKPGG 328 (412)
...++.++.+|..++-. ...+.||+|+.- .|=..... ..++...++|++.|
T Consensus 143 ---l~~~i~~~~~D~~~~L~--~~~~~fDvV~lDP~y~~~~~s--aavkk~~~~lr~l~ 194 (258)
T 2oyr_A 143 ---LQERLQLIHASSLTALT--DITPRPQVVYLDPMFPHKQKS--ALVKKEMRVFQSLV 194 (258)
T ss_dssp ---HHHHEEEEESCHHHHST--TCSSCCSEEEECCCCCCCCC-------HHHHHHHHHS
T ss_pred ---hhcCEEEEECCHHHHHH--hCcccCCEEEEcCCCCCcccc--hHHHHHHHHHHHhh
Confidence 01247899999887532 122479999764 23222111 34556666776644
No 280
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.94 E-value=1e-05 Score=82.77 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=37.5
Q ss_pred CCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHh
Q 015160 190 PPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 229 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~f 229 (412)
+.+|||+|||+|..+..||+.|..|+|+|+|..|+..++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~ 133 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARH 133 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHH
Confidence 5799999999999999999999999999999999988773
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.92 E-value=1.8e-05 Score=70.88 Aligned_cols=46 Identities=9% Similarity=-0.176 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCCCCCCCCeEEEecCCCC-hhHHHHHH-cCCeEEEEeCCHHH
Q 015160 173 PILEELDALFPNRSKESPPACLVPGAGLG-RLALEISH-LGFISQGNEFSYYM 223 (412)
Q Consensus 173 pIl~~L~~~~p~~~~~~~~rVLvPGCGlG-RLa~eLA~-~Gf~V~GnD~S~~M 223 (412)
.|.++|.+.+. .+.+||++|||.| |.|..||+ .|++|+++|++...
T Consensus 24 ~LaeYI~~~~~-----~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~A 71 (153)
T 2k4m_A 24 DLAVYIIRCSG-----PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSH 71 (153)
T ss_dssp HHHHHHHHHSC-----SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSS
T ss_pred HHHHHHHhcCC-----CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccc
Confidence 37777777764 3469999999999 89999997 99999999999854
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.92 E-value=5.1e-05 Score=83.64 Aligned_cols=138 Identities=16% Similarity=0.173 Sum_probs=83.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC-----CeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccc
Q 015160 189 SPPACLVPGAGLGRLALEISHLG-----FISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVS 263 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G-----f~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~ 263 (412)
++.+|||||||+|.+...++++. ..+.|+|++..++..|+..+|..... .+.++.
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~--------------------LlhGi~ 380 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ--------------------LVSSNN 380 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTT--------------------TCBTTB
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhh--------------------hhcCCC
Confidence 56799999999999999999864 46899999999998773223211000 000110
Q ss_pred cCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEe--cccC--Chh------------------------h-HH
Q 015160 264 IPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFID--TAH------------------------N-IV 314 (412)
Q Consensus 264 iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFID--ta~------------------------N-i~ 314 (412)
...+..+|+.+... ...+.||+||++ |... ... | -.
T Consensus 381 -------------~~~I~~dD~L~~~~--~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~ 445 (878)
T 3s1s_A 381 -------------APTITGEDVCSLNP--EDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEA 445 (878)
T ss_dssp -------------CCEEECCCGGGCCG--GGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHH
T ss_pred -------------cceEEecchhcccc--cccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHH
Confidence 12345566665321 124689999997 4221 110 1 22
Q ss_pred HHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 315 EYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 315 ~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
.+++.+.++|||||.+.-+-|--|-+.. .-....+++.|.+. +.+..
T Consensus 446 aFIe~Al~lLKpGGrLAfIlP~s~Lf~s----------g~~~kkLRk~LLe~-~~I~a 492 (878)
T 3s1s_A 446 LFLELVTELVQDGTVISAIMPKQYLTAQ----------GNESKAFREFLVGN-FGLEH 492 (878)
T ss_dssp HHHHHHHHHSCTTCEEEEEEETHHHHCC----------SHHHHHHHHHHTTT-TCEEE
T ss_pred HHHHHHHHhcCCCcEEEEEEChHHhccC----------ChHHHHHHHHHHhC-CCeEE
Confidence 3678889999999999876664332211 01257788877653 44443
No 283
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=97.86 E-value=7.3e-05 Score=73.29 Aligned_cols=40 Identities=8% Similarity=-0.050 Sum_probs=35.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc---CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHL---GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+|||+|||+|..+..||.+ +-.|+|+|+|..|+..++
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~ 144 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 144 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHH
Confidence 5679999999999999999985 258999999999997665
No 284
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.64 E-value=0.00041 Score=64.55 Aligned_cols=99 Identities=13% Similarity=0.012 Sum_probs=67.1
Q ss_pred CCeEEEecCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 190 PPACLVPGAGLGRLALEISHL-GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
..+||+.|| |.-+..+|+. |-.|+.+|.+..+...++-.+..+.-
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~-------------------------------- 76 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPP-------------------------------- 76 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCC--------------------------------
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCC--------------------------------
Confidence 458999998 4788888887 78999999999998777644432100
Q ss_pred CCCCCCCCceeEEecccccc-----------------cC-----CCCCCCCccEEEEecccCChhhHHHHHHHHHHhccC
Q 015160 269 PASAGITEGFSMCGGDFVEV-----------------YS-----DPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKD 326 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~el-----------------y~-----~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKP 326 (412)
....++.+..||..+. |. . ...++||+| |||-.. ...|+..+.+.|||
T Consensus 77 ----~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~-~~~~~fDlI----fIDg~k-~~~~~~~~l~~l~~ 146 (202)
T 3cvo_A 77 ----AEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRT-EGFRHPDVV----LVDGRF-RVGCALATAFSITR 146 (202)
T ss_dssp ----CTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGC-TTCCCCSEE----EECSSS-HHHHHHHHHHHCSS
T ss_pred ----CCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhcc-ccCCCCCEE----EEeCCC-chhHHHHHHHhcCC
Confidence 0012355666665432 10 0 013689998 577543 34888888899999
Q ss_pred CcEEEE
Q 015160 327 GGVWIN 332 (412)
Q Consensus 327 GG~wIN 332 (412)
||++|-
T Consensus 147 GG~Iv~ 152 (202)
T 3cvo_A 147 PVTLLF 152 (202)
T ss_dssp CEEEEE
T ss_pred CeEEEE
Confidence 999983
No 285
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.63 E-value=0.0001 Score=74.82 Aligned_cols=113 Identities=14% Similarity=0.133 Sum_probs=74.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
++.+||++|-|.|..+.++.+..- .|+.+|+.+.++.+++--+ |.+... .. .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yf------------p~~~~~----~~-------d---- 257 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYM------------RKTCGD----VL-------D---- 257 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHC------------CC--------CC-------S----
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhc------------hhhhhh----hh-------c----
Confidence 457999999999999999998754 6999999999997766211 111000 00 0
Q ss_pred CCCCCCCCCceeEEecccccccCC-CCCCCCccEEEEeccc---CC-----hhhH--HHHHHHHHHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSD-PSQVGAWDAVVTCFFI---DT-----AHNI--VEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD~VvT~FFI---Dt-----a~Ni--~~yl~~I~~~LKPGG~wIN 332 (412)
.....++.++.+|.+++-.. ....++||+|+.=.|- .+ +..+ .++++.++++|||||+++.
T Consensus 258 ----~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~ 329 (381)
T 3c6k_A 258 ----NLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFT 329 (381)
T ss_dssp ----SSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ----cccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEE
Confidence 01123478889998764310 0123689999876542 11 1112 4678999999999999996
No 286
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.46 E-value=0.0002 Score=69.08 Aligned_cols=54 Identities=20% Similarity=0.153 Sum_probs=43.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhh
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFIL 231 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~fil 231 (412)
+++.|.+.+. .++..||||+||+|.++..++++|..+.|+|++..|+..|+--+
T Consensus 224 l~~~~i~~~~----~~~~~vlD~f~GsGt~~~~a~~~g~~~~g~e~~~~~~~~a~~r~ 277 (297)
T 2zig_A 224 LAERLVRMFS----FVGDVVLDPFAGTGTTLIAAARWGRRALGVELVPRYAQLAKERF 277 (297)
T ss_dssp HHHHHHHHHC----CTTCEEEETTCTTTHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHHHHH
Confidence 4455544443 25679999999999999999999999999999999998777443
No 287
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.43 E-value=0.00052 Score=66.90 Aligned_cols=115 Identities=8% Similarity=-0.015 Sum_probs=68.0
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHHHHHHHHhhhhccccccccccccccc
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIH 247 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~ 247 (412)
+.-.+++..++.+- ++..+|||+|||.|..+...+++ |- .|.|+|++..|.. + |
T Consensus 59 aA~KL~ei~ek~~l----~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~----------~-------p--- 114 (277)
T 3evf_A 59 GTAKLRWFHERGYV----KLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHE----------K-------P--- 114 (277)
T ss_dssp HHHHHHHHHHTTSS----CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCC----------C-------C---
T ss_pred HHHHHHHHHHhCCC----CCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCcc----------c-------c---
Confidence 33346666666321 25568999999999999988876 54 5789998865410 0 0
Q ss_pred ccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChh------hHHHHHHHHH
Q 015160 248 SNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAH------NIVEYIEIIS 321 (412)
Q Consensus 248 ~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~------Ni~~yl~~I~ 321 (412)
+|.. ....++....+++ ++.. ...+.||+|++-...++.. .....|+.+.
T Consensus 115 ----------------i~~~-----~~g~~ii~~~~~~-dv~~--l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~ 170 (277)
T 3evf_A 115 ----------------MNVQ-----SLGWNIITFKDKT-DIHR--LEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVE 170 (277)
T ss_dssp ----------------CCCC-----BTTGGGEEEECSC-CTTT--SCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred ----------------cccC-----cCCCCeEEEeccc-eehh--cCCCCccEEEecCccCcCchHHHHHHHHHHHHHHH
Confidence 0000 0001233344443 2222 1247899999865333221 1123467788
Q ss_pred HhccCC-cEEEE
Q 015160 322 RILKDG-GVWIN 332 (412)
Q Consensus 322 ~~LKPG-G~wIN 332 (412)
++|||| |.||-
T Consensus 171 ~~LkpG~G~FV~ 182 (277)
T 3evf_A 171 KWLACGVDNFCV 182 (277)
T ss_dssp HHHTTCCSEEEE
T ss_pred HHhCCCCCeEEE
Confidence 999999 99995
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.41 E-value=0.0011 Score=64.66 Aligned_cols=158 Identities=13% Similarity=0.112 Sum_probs=86.5
Q ss_pred HHHHHHhcCccc----ChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-------CCeEEEEeC
Q 015160 151 IIRNIVRDWAAE----GKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-------GFISQGNEF 219 (412)
Q Consensus 151 ~L~q~~RDWS~e----G~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-------Gf~V~GnD~ 219 (412)
.++.+-+||... ...+|-.....+++.+...- .+.+||++|+..|+-+..+|.. +-.|+++|.
T Consensus 70 ~~r~~g~~~~~~~~tmv~~~r~~~L~~l~~~v~~~~------~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~Dt 143 (282)
T 2wk1_A 70 EVRNEGRDWPANAHTMIGIKRLENIRQCVEDVIGNN------VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADS 143 (282)
T ss_dssp HHHHTTCSCBSSCSCSSHHHHHHHHHHHHHHHHHTT------CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEEC
T ss_pred HHHhccccCCcccccccCHHHHHHHHHHHHHHHhcC------CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEEC
Confidence 477888999653 35677655555555555421 3568999999999988887643 567999996
Q ss_pred CHHHHHHHHhhhhcccccccccccccccccCC-CCCcccCccccccCCCCCCCCCC-CCceeEEecccccccCCCCCCCC
Q 015160 220 SYYMMICSSFILNHTETAGEWNIYPWIHSNCN-SLSDSDQLRPVSIPDIHPASAGI-TEGFSMCGGDFVEVYSDPSQVGA 297 (412)
Q Consensus 220 S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn-~~s~~~qlr~v~iPDv~p~~~~~-~~~~s~~~GDF~ely~~~~~~~~ 297 (412)
-..+-..... ..... ....+ +.+.. ......+.|. .+. .... .+++.++.|||.+.-. ....++
T Consensus 144 feG~pe~~~~--~~~~d-~~~~~----~~~~~~~~~~~~~ar~-n~~-----~~gl~~~~I~li~Gda~etL~-~~~~~~ 209 (282)
T 2wk1_A 144 FQGIPDVGED--GYAGD-RKMAL----HRRNSVLAVSEEEVRR-NFR-----NYDLLDEQVRFLPGWFKDTLP-TAPIDT 209 (282)
T ss_dssp SSCSCCCCTT--SCHHH-HHHCG----GGGHHHHCCCHHHHHH-HHH-----HTTCCSTTEEEEESCHHHHST-TCCCCC
T ss_pred CCCCCccccc--ccccc-ccccc----ccccccchhHHHHHHH-HHH-----HcCCCcCceEEEEeCHHHHHh-hCCCCC
Confidence 4322000000 00000 00000 00000 0000000000 000 0011 2458999999988542 112356
Q ss_pred ccEEEEecccCCh--hhHHHHHHHHHHhccCCcEEEE
Q 015160 298 WDAVVTCFFIDTA--HNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 298 fD~VvT~FFIDta--~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
||+| |||.. .+..+||+.++..|+|||++|-
T Consensus 210 ~d~v----fIDaD~y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 210 LAVL----RMDGDLYESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp EEEE----EECCCSHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred EEEE----EEcCCccccHHHHHHHHHhhcCCCEEEEE
Confidence 7766 67754 3567899999999999999984
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.29 E-value=0.0015 Score=66.24 Aligned_cols=121 Identities=13% Similarity=0.081 Sum_probs=82.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
++.+|||+||+.|.-+..|+++|-.|+|+|... |-- .+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~rg~~V~aVD~~~-l~~----~l~------------------------------------ 249 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGP-MAQ----SLM------------------------------------ 249 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCEEEEECSSC-CCH----HHH------------------------------------
T ss_pred CCCEEEEeCcCCCHHHHHHHHCCCEEEEEEhhh-cCh----hhc------------------------------------
Confidence 678999999999999999999999999999874 310 000
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCC---cEEEEe-cCcchhhhhcc
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDG---GVWINL-GPLLYHFADLY 344 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPG---G~wIN~-GPLlyh~~~~~ 344 (412)
...++.++++|..++.. ..+.+|+||+ |-+.+....++.+.+.|..| +..+|+ -|+...++
T Consensus 250 -----~~~~V~~~~~d~~~~~~---~~~~~D~vvs----Dm~~~p~~~~~l~~~wl~~~~~~~aI~~lKL~mk~~~~--- 314 (375)
T 4auk_A 250 -----DTGQVTWLREDGFKFRP---TRSNISWMVC----DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYE--- 314 (375)
T ss_dssp -----TTTCEEEECSCTTTCCC---CSSCEEEEEE----CCSSCHHHHHHHHHHHHHTTSCSEEEEEEECCSSSHHH---
T ss_pred -----cCCCeEEEeCccccccC---CCCCcCEEEE----cCCCChHHhHHHHHHHHhccccceEEEEEEecccchHH---
Confidence 01237788999887543 2468999987 77777777777777777665 555553 12211111
Q ss_pred CCCCCcccCCCHHHHHHHHHhCCCEEE
Q 015160 345 GQEDEMSIELSLEDVKRVALHYGFEFE 371 (412)
Q Consensus 345 g~~~~~~ieLS~EEL~~ll~~~GFeii 371 (412)
.+.--.+.+...+...||...
T Consensus 315 ------~l~~~~~~i~~~l~~~g~~~~ 335 (375)
T 4auk_A 315 ------EVSHNLAYIQAQLDEHGINAQ 335 (375)
T ss_dssp ------HHHHHHHHHHHHHHHTTCCEE
T ss_pred ------HHHHHHHHHHHHHHhcCcchh
Confidence 122245677778888898753
No 290
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.09 E-value=0.0032 Score=66.01 Aligned_cols=40 Identities=18% Similarity=0.112 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCChhHHHHHHc---------------CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHL---------------GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~---------------Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||||+||+|.+.....+. -..+.|.|+...|...|+
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~ 271 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQ 271 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHH
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHH
Confidence 5669999999999997665432 246899999999987665
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.00 E-value=0.0012 Score=64.68 Aligned_cols=41 Identities=12% Similarity=-0.148 Sum_probs=37.3
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHh
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 229 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~f 229 (412)
++..+||.+||.|.++..|++++..|+|+|.++.|+..++-
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILERGGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCCcHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 56799999999999999999998899999999999977663
No 292
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.99 E-value=0.025 Score=55.75 Aligned_cols=149 Identities=21% Similarity=0.202 Sum_probs=87.2
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
.+.+|||+-||.|.+...+.+.|+. |.++|++...+.+.+ .|+.. .
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~--~N~~~----------~--------------------- 56 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYE--MNFGE----------K--------------------- 56 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHH--HHHSC----------C---------------------
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHH--HHcCC----------C---------------------
Confidence 3579999999999999999999997 568999998875544 22210 0
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEec-------------ccCChhhHHHHHHHHHHhccCCcEEE-Ee
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-------------FIDTAHNIVEYIEIISRILKDGGVWI-NL 333 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-------------FIDta~Ni~~yl~~I~~~LKPGG~wI-N~ 333 (412)
. .+|+.++.. ..-..+|+|+..+ +-|.-..+...+-.+.+.+||--+++ |+
T Consensus 57 ----------~---~~Di~~~~~--~~~~~~D~l~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r~i~~~~P~~~~~ENV 121 (327)
T 2c7p_A 57 ----------P---EGDITQVNE--KTIPDHDILCAGFPCQAFSISGKQKGFEDSRGTLFFDIARIVREKKPKVVFMENV 121 (327)
T ss_dssp ----------C---BSCGGGSCG--GGSCCCSEEEEECCCTTTCTTSCCCGGGSTTSCHHHHHHHHHHHHCCSEEEEEEE
T ss_pred ----------C---cCCHHHcCH--hhCCCCCEEEECCCCCCcchhcccCCCcchhhHHHHHHHHHHHhccCcEEEEeCc
Confidence 0 123333211 0011345555432 12433334443444445679976555 44
Q ss_pred cCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 015160 334 GPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 334 GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
--++-+- -.-..+.+...+++.|+.+...-.....|+.-. .-...|+|+.++
T Consensus 122 ~gl~~~~-----------~~~~~~~i~~~l~~~GY~v~~~vl~a~~~GvPQ------~R~R~~iv~~~~ 173 (327)
T 2c7p_A 122 KNFASHD-----------NGNTLEVVKNTMNELDYSFHAKVLNALDYGIPQ------KRERIYMICFRN 173 (327)
T ss_dssp GGGGTGG-----------GGHHHHHHHHHHHHTTBCCEEEEEEGGGGTCSB------CCEEEEEEEEBG
T ss_pred HHHHhcc-----------ccHHHHHHHHHHHhCCCEEEEEEEEHHHcCCCc------cceEEEEEEEeC
Confidence 3333211 012467888999999998765444445564321 235788888876
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.86 E-value=0.0038 Score=61.01 Aligned_cols=72 Identities=10% Similarity=-0.037 Sum_probs=45.4
Q ss_pred cchHHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCC
Q 015160 143 ADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFS 220 (412)
Q Consensus 143 ~d~~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S 220 (412)
.|...+|..|+.=...+ .=|..+.-.+++..++. .- .+..+|||+|||.|..+...+++ |. .|.|+|++
T Consensus 53 ~~r~~ar~~l~~~~~~g-----~YrSRAAfKL~ei~eK~-~L---k~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG 123 (282)
T 3gcz_A 53 VDRTHARDSLENGIQNG-----IAVSRGSAKLRWMEERG-YV---KPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLG 123 (282)
T ss_dssp ECCHHHHHHHHHTCCSS-----BCSSTHHHHHHHHHHTT-SC---CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred ccHHHHHHHHhcCCcCC-----CEecHHHHHHHHHHHhc-CC---CCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEec
Confidence 45566666665532221 11223333466666653 21 25669999999999999988854 54 58899999
Q ss_pred HHH
Q 015160 221 YYM 223 (412)
Q Consensus 221 ~~M 223 (412)
..|
T Consensus 124 ~d~ 126 (282)
T 3gcz_A 124 VQG 126 (282)
T ss_dssp CTT
T ss_pred cCc
Confidence 865
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.66 E-value=0.0034 Score=61.79 Aligned_cols=74 Identities=12% Similarity=-0.012 Sum_probs=47.1
Q ss_pred CcchHHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeC
Q 015160 142 LADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEF 219 (412)
Q Consensus 142 ~~d~~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~ 219 (412)
..|...+|..|+.=...= ..=|..++-.+++..++.+ .+++.+|||+||+.|..+..++++ |. .|.|+|+
T Consensus 42 e~dr~~ar~~l~~~~~~~----g~yrSRaa~KL~ei~ek~l----~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdl 113 (300)
T 3eld_A 42 EVDRTAARRYLKEGRTDV----GISVSRGAAKIRWLHERGY----LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTL 113 (300)
T ss_dssp EECCHHHHHHHHHTCSSS----CCCSSTTHHHHHHHHHHTS----CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECC
T ss_pred cccHHHHHHHHHcCCccC----CCccchHHHHHHHHHHhCC----CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEe
Confidence 355566776666532110 1112333344666666522 126789999999999999999975 54 5889999
Q ss_pred CHHH
Q 015160 220 SYYM 223 (412)
Q Consensus 220 S~~M 223 (412)
+..|
T Consensus 114 g~~~ 117 (300)
T 3eld_A 114 GIEG 117 (300)
T ss_dssp CCTT
T ss_pred cccc
Confidence 8754
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.65 E-value=0.0044 Score=60.06 Aligned_cols=107 Identities=16% Similarity=0.054 Sum_probs=63.8
Q ss_pred HHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeCCHH--HHHHHHhhhhcccccccccccccccccC
Q 015160 175 LEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEFSYY--MMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 175 l~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~S~~--ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
|.+|.+.+ - -+++.+|||+||+-|.-+...|++ |- .|.|..+... ++ |.
T Consensus 62 L~EIdeK~-l--ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~-------------------P~----- 114 (269)
T 2px2_A 62 LRWLVERR-F--VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEE-------------------PM----- 114 (269)
T ss_dssp HHHHHHTT-S--CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCC-------------------CC-----
T ss_pred HHHHHHcC-C--CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccC-------------------CC-----
Confidence 44455443 1 247889999999999999998886 22 3455544432 10 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEec-ccccccCCCCCCCCccEEEEec-------ccCChhhHHHHHHHHHH
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAWDAVVTCF-------FIDTAHNIVEYIEIISR 322 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~G-DF~ely~~~~~~~~fD~VvT~F-------FIDta~Ni~~yl~~I~~ 322 (412)
.++. |.+ +=+.|.+| ||+++. ...+|+|++=. .+|.+.-+. .|+-..+
T Consensus 115 ---------~~~~-~Gv--------~~i~~~~G~Df~~~~-----~~~~DvVLSDMAPnSG~~~vD~~Rs~~-aL~~A~~ 170 (269)
T 2px2_A 115 ---------LMQS-YGW--------NIVTMKSGVDVFYKP-----SEISDTLLCDIGESSPSAEIEEQRTLR-ILEMVSD 170 (269)
T ss_dssp ---------CCCS-TTG--------GGEEEECSCCGGGSC-----CCCCSEEEECCCCCCSCHHHHHHHHHH-HHHHHHH
T ss_pred ---------cccC-CCc--------eEEEeeccCCccCCC-----CCCCCEEEeCCCCCCCccHHHHHHHHH-HHHHHHH
Confidence 0000 000 01455668 999853 25799999743 344443332 5666779
Q ss_pred hccCCc-EEEE
Q 015160 323 ILKDGG-VWIN 332 (412)
Q Consensus 323 ~LKPGG-~wIN 332 (412)
+||||| .|+-
T Consensus 171 ~Lk~gG~~Fvv 181 (269)
T 2px2_A 171 WLSRGPKEFCI 181 (269)
T ss_dssp HHTTCCSEEEE
T ss_pred HhhcCCcEEEE
Confidence 999999 7874
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.50 E-value=0.044 Score=54.08 Aligned_cols=39 Identities=10% Similarity=0.004 Sum_probs=33.7
Q ss_pred CCeEEEecCCCChhHHHHHHcC--Ce-EEEEeCCHHHHHHHH
Q 015160 190 PPACLVPGAGLGRLALEISHLG--FI-SQGNEFSYYMMICSS 228 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~G--f~-V~GnD~S~~ML~~s~ 228 (412)
..+|||+-||.|.+...+.+.| +. |.++|++...+.+.+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~ 43 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYK 43 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHH
Confidence 3589999999999999999999 54 789999998876544
No 297
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.39 E-value=0.094 Score=50.39 Aligned_cols=149 Identities=15% Similarity=0.110 Sum_probs=90.2
Q ss_pred CeEEEecCCCChhHHHHHHcCCeEE-EEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCC
Q 015160 191 PACLVPGAGLGRLALEISHLGFISQ-GNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V~-GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p 269 (412)
.+|||+=||.|.+..-|-+.||++. ++|+......+.+ .|+ |
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~--~N~----------~------------------------- 43 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYE--SNH----------S------------------------- 43 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHH--HHC----------C-------------------------
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHH--HHC----------C-------------------------
Confidence 3799999999999999999999865 9999998765433 222 1
Q ss_pred CCCCCCCceeEEecccccccCCCCCCCCccEEEEec-------------ccCChhhHHHHHHHHHHhccCCcEEE-EecC
Q 015160 270 ASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCF-------------FIDTAHNIVEYIEIISRILKDGGVWI-NLGP 335 (412)
Q Consensus 270 ~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~F-------------FIDta~Ni~~yl~~I~~~LKPGG~wI-N~GP 335 (412)
-.++.+|+.++.. ..-...|+++-.+ +-|.-..+...+-.|.+.+||.-+++ |+--
T Consensus 44 --------~~~~~~DI~~i~~--~~~~~~D~l~ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk~~~~ENV~g 113 (331)
T 3ubt_Y 44 --------AKLIKGDISKISS--DEFPKCDGIIGGPPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPIFFLAENVKG 113 (331)
T ss_dssp --------SEEEESCGGGCCG--GGSCCCSEEECCCCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCSEEEEEECCG
T ss_pred --------CCcccCChhhCCH--hhCCcccEEEecCCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCeEEEeeeecc
Confidence 0123455555432 1123456665432 22333345544445666789976666 4332
Q ss_pred cchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEcC
Q 015160 336 LLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKKS 403 (412)
Q Consensus 336 Llyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~~ 403 (412)
++.+- -.-..+++...+++.|+.+...-.....|+.-. .-+.+|+|+.|+.
T Consensus 114 l~~~~-----------~~~~~~~i~~~l~~~GY~v~~~vlna~~yGvPQ------~R~Rvfivg~r~~ 164 (331)
T 3ubt_Y 114 MMAQR-----------HNKAVQEFIQEFDNAGYDVHIILLNANDYGVAQ------DRKRVFYIGFRKE 164 (331)
T ss_dssp GGGCT-----------TSHHHHHHHHHHHHHTEEEEEEEEEGGGTTCSB------CCEEEEEEEEEGG
T ss_pred ccccc-----------ccchhhhhhhhhccCCcEEEEEecccccCCCCc------ccceEEEEEEcCC
Confidence 33211 012467888888999998865544445564322 2257888998864
No 298
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.21 E-value=0.046 Score=54.89 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=33.1
Q ss_pred CeEEEecCCCChhHHHHHHcCCeE-EEEeCCHHHHHHHH
Q 015160 191 PACLVPGAGLGRLALEISHLGFIS-QGNEFSYYMMICSS 228 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf~V-~GnD~S~~ML~~s~ 228 (412)
.+|||+-||.|.++..|.+.||.+ .++|++...+.+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~ 41 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHA 41 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 589999999999999999999985 59999998865443
No 299
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.08 E-value=0.011 Score=55.84 Aligned_cols=51 Identities=16% Similarity=0.074 Sum_probs=41.7
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHH
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~ 228 (412)
+++.|-+.+. .++..||||.||+|..+...+++|..+.|+|++..++..|.
T Consensus 201 l~~~~i~~~~----~~~~~vlD~f~GsGtt~~~a~~~gr~~ig~e~~~~~~~~~~ 251 (260)
T 1g60_A 201 LIERIIRASS----NPNDLVLDCFMGSGTTAIVAKKLGRNFIGCDMNAEYVNQAN 251 (260)
T ss_dssp HHHHHHHHHC----CTTCEEEESSCTTCHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEECCCCCCHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 4444444432 25679999999999999999999999999999999987666
No 300
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=95.90 E-value=0.03 Score=56.15 Aligned_cols=108 Identities=16% Similarity=0.059 Sum_probs=69.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
++.+|||..||.|.=+..||..|- .|+++|+|..=+...+-.+.+..- +.+
T Consensus 148 pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~-----------------------~~~---- 200 (359)
T 4fzv_A 148 PGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVP-----------------------EEI---- 200 (359)
T ss_dssp TTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSC-----------------------TTT----
T ss_pred CCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhh-----------------------hhh----
Confidence 677999999999999999999876 599999999876544332321100 000
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEE---ec--------------ccCChhhH-------HHHHHHHHH
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVT---CF--------------FIDTAHNI-------VEYIEIISR 322 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT---~F--------------FIDta~Ni-------~~yl~~I~~ 322 (412)
....++.....|.+.+.. ...+.||.|+. |- .-.+..++ .+.|+...+
T Consensus 201 ------~~~~~v~v~~~D~~~~~~--~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~ 272 (359)
T 4fzv_A 201 ------RDGNQVRVTSWDGRKWGE--LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLL 272 (359)
T ss_dssp ------TTSSSEEEECCCGGGHHH--HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHH
T ss_pred ------ccCCceEEEeCchhhcch--hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 011246677788776532 12478999873 10 11111222 246788889
Q ss_pred hccCCcEEE
Q 015160 323 ILKDGGVWI 331 (412)
Q Consensus 323 ~LKPGG~wI 331 (412)
+|||||++|
T Consensus 273 ~lkpGG~LV 281 (359)
T 4fzv_A 273 ATKPGGHVV 281 (359)
T ss_dssp TEEEEEEEE
T ss_pred cCCCCcEEE
Confidence 999999998
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.64 E-value=0.029 Score=55.55 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=54.4
Q ss_pred EEecccccccCCCCCCCCccEEEEecc------cCCh----hhHHHH-HHHHHHhccCCcEEEEecCcchhhhhccCCCC
Q 015160 280 MCGGDFVEVYSDPSQVGAWDAVVTCFF------IDTA----HNIVEY-IEIISRILKDGGVWINLGPLLYHFADLYGQED 348 (412)
Q Consensus 280 ~~~GDF~ely~~~~~~~~fD~VvT~FF------IDta----~Ni~~y-l~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~ 348 (412)
++.||+.+++. .+.||+|++=.. .|.. ..+.++ ++-+.+.|||||.|+-- .|+.
T Consensus 156 ~IqGD~~~~~~----~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK-----VFQG------ 220 (344)
T 3r24_A 156 TLIGDCATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK-----ITEH------ 220 (344)
T ss_dssp EEESCGGGEEE----SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE-----ECSS------
T ss_pred EEEcccccccc----CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE-----EecC------
Confidence 38899887664 478999997542 2322 234444 55566889999999851 1221
Q ss_pred CcccCCCHHHHHHHHHhCCCEEEEEeeccccCCCCcccccccccceEEEEEEEc
Q 015160 349 EMSIELSLEDVKRVALHYGFEFEKEKTIETTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 349 ~~~ieLS~EEL~~ll~~~GFeii~e~~i~s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
+- .+++.++. + -|+-++.....+. .. -.-+|+|++..
T Consensus 221 --sg---~~~L~~lr-k-~F~~VK~fK~ASR-a~---------SsEvYLVG~gf 257 (344)
T 3r24_A 221 --SW---NADLYKLM-G-HFSWWTAFVTNVN-AS---------SSEAFLIGANY 257 (344)
T ss_dssp --SC---CHHHHHHH-T-TEEEEEEEEEGGG-TT---------SSCEEEEEEEE
T ss_pred --CC---HHHHHHHH-h-hCCeEEEECCCCC-CC---------CeeEEEEeeec
Confidence 11 25566666 3 6888775532122 11 14678888664
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.39 E-value=0.12 Score=51.00 Aligned_cols=40 Identities=10% Similarity=-0.049 Sum_probs=33.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC--eE--EEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF--IS--QGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf--~V--~GnD~S~~ML~~s~ 228 (412)
...+|||+-||.|.+..-|.+.|+ .+ .++|+......+.+
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~ 52 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYS 52 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHH
Confidence 457999999999999999999995 54 59999998875443
No 303
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.34 E-value=0.24 Score=48.94 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=86.9
Q ss_pred CCCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
+...|+.+|||+...++.|... +..+.-+|+ +.++..-+.++........ .+. . .. .-|.
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~-~l~-------~----~~-----~~~~ 158 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRI-SLG-------L----SK-----EDTA 158 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHH-HHT-------C----CS-----SCCC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhh-hcc-------c----cc-----cccc
Confidence 3468999999999999999875 456667777 5555433333322100000 000 0 00 0000
Q ss_pred CCCCCCCCCCceeEEeccccccc-------CCCCCCCCccEEEEe---cccCChhhHHHHHHHHHHhccCCcEEEEe---
Q 015160 267 IHPASAGITEGFSMCGGDFVEVY-------SDPSQVGAWDAVVTC---FFIDTAHNIVEYIEIISRILKDGGVWINL--- 333 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely-------~~~~~~~~fD~VvT~---FFIDta~Ni~~yl~~I~~~LKPGG~wIN~--- 333 (412)
.... .....+..++.+|+++.. ..+ ..+...++++- .|++... +.+.|+.|.+.+ |||.+|++
T Consensus 159 ~~~~-~~~~~~~~~v~~DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~-~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 159 KSPF-LIDQGRYKLAACDLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNE-SQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTE-EEECSSEEEEECCTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHH-HHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cccc-ccCCCceEEEecCCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHH-HHHHHHHHHhhC-CCcEEEEEecc
Confidence 0000 001245889999998731 111 11334444432 4677554 778899999887 88988864
Q ss_pred cC----------cchhhhhccCCCCCccc--CCCHHHHHHHHHhCCCE
Q 015160 334 GP----------LLYHFADLYGQEDEMSI--ELSLEDVKRVALHYGFE 369 (412)
Q Consensus 334 GP----------Llyh~~~~~g~~~~~~i--eLS~EEL~~ll~~~GFe 369 (412)
+| +.+++....| .+-.++ ..+.++.++.+.+.||+
T Consensus 235 ~~~~~~~~fg~~m~~~l~~~rg-~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 235 GGSQPNDRFGAIMQSNLKESRN-LEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CCCSTTCCHHHHHHHHHHHHHC-CCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCCCCcchHHHHHHHHhhcccC-CcccccccCCCHHHHHHHHHHCCCC
Confidence 33 1122322112 121122 25899999999999998
No 304
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.27 E-value=0.01 Score=58.52 Aligned_cols=72 Identities=24% Similarity=0.427 Sum_probs=51.8
Q ss_pred eeEEecccccccCCCCCCCCccEEEEecccC---ChhhH----HHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCc
Q 015160 278 FSMCGGDFVEVYSDPSQVGAWDAVVTCFFID---TAHNI----VEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEM 350 (412)
Q Consensus 278 ~s~~~GDF~ely~~~~~~~~fD~VvT~FFID---ta~Ni----~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~ 350 (412)
+.+..||..+.... -...+||+| |+| .+.|. .++|+.|+++|+|||+++. |
T Consensus 168 L~l~~GDa~~~l~~-l~~~~~Da~----flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT-----Y------------ 225 (308)
T 3vyw_A 168 LKVLLGDARKRIKE-VENFKADAV----FHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS-----Y------------ 225 (308)
T ss_dssp EEEEESCHHHHGGG-CCSCCEEEE----EECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE-----S------------
T ss_pred EEEEechHHHHHhh-hcccceeEE----EeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE-----E------------
Confidence 67889998875431 113467877 444 33443 4799999999999999985 2
Q ss_pred ccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 351 SIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 351 ~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
-+.-.|++.|.++||++.+..
T Consensus 226 ---taag~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 226 ---SSSLSVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp ---CCCHHHHHHHHHTTCEEEEEE
T ss_pred ---eCcHHHHHHHHHCCCEEEecC
Confidence 123578899999999998765
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=94.81 E-value=0.074 Score=52.57 Aligned_cols=134 Identities=13% Similarity=0.043 Sum_probs=76.1
Q ss_pred CcchHHHHHHHHHHHhc---CcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEE
Q 015160 142 LADVDKVRCIIRNIVRD---WAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQG 216 (412)
Q Consensus 142 ~~d~~kv~s~L~q~~RD---WS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~G 216 (412)
..|...++..|+.=.-+ |-+-+ .| .+++.+++ +.- +++.+|||+||++|..+...|.+ |. .|.|
T Consensus 55 Evdr~~ar~~l~~g~~~~g~y~SR~------~~-KL~ei~~~-~~l---~~~~~VlDLGaapGGwsq~~~~~~gv~~V~a 123 (321)
T 3lkz_A 55 EVDRSAAKHARKEGNVTGGHPVSRG------TA-KLRWLVER-RFL---EPVGKVIDLGCGRGGWCYYMATQKRVQEVRG 123 (321)
T ss_dssp EECCHHHHHHHHHTCCSSCCCSSTH------HH-HHHHHHHT-TSC---CCCEEEEEETCTTCHHHHHHTTCTTEEEEEE
T ss_pred eechHHHHHHHhcCcCcCCCccchH------HH-HHHHHHHh-cCC---CCCCEEEEeCCCCCcHHHHHHhhcCCCEEEE
Confidence 46667777777653322 22211 12 24444444 322 25669999999999999866554 65 4899
Q ss_pred EeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEec-ccccccCCCCCC
Q 015160 217 NEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGG-DFVEVYSDPSQV 295 (412)
Q Consensus 217 nD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~G-DF~ely~~~~~~ 295 (412)
+|+-..= + +.|-.. ..+. -+.+.+..+ |+..+..
T Consensus 124 vdvG~~~---------h--------e~P~~~-----------------~ql~------w~lV~~~~~~Dv~~l~~----- 158 (321)
T 3lkz_A 124 YTKGGPG---------H--------EEPQLV-----------------QSYG------WNIVTMKSGVDVFYRPS----- 158 (321)
T ss_dssp ECCCSTT---------S--------CCCCCC-----------------CBTT------GGGEEEECSCCTTSSCC-----
T ss_pred EEcCCCC---------c--------cCcchh-----------------hhcC------CcceEEEeccCHhhCCC-----
Confidence 9988621 0 011000 0000 012677777 7665432
Q ss_pred CCccEEEEec-------ccCChhhHHHHHHHHHHhccCC-cEEEE
Q 015160 296 GAWDAVVTCF-------FIDTAHNIVEYIEIISRILKDG-GVWIN 332 (412)
Q Consensus 296 ~~fD~VvT~F-------FIDta~Ni~~yl~~I~~~LKPG-G~wIN 332 (412)
..+|+|++=. .+|-+. -...|+-+.+.|++| |-|+-
T Consensus 159 ~~~D~ivcDigeSs~~~~ve~~R-tl~vLel~~~wL~~~~~~f~~ 202 (321)
T 3lkz_A 159 ECCDTLLCDIGESSSSAEVEEHR-TIRVLEMVEDWLHRGPREFCV 202 (321)
T ss_dssp CCCSEEEECCCCCCSCHHHHHHH-HHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCEEEEECccCCCChhhhhhH-HHHHHHHHHHHhccCCCcEEE
Confidence 5689887533 223222 234677778999998 88874
No 306
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.81 E-value=0.3 Score=48.12 Aligned_cols=37 Identities=11% Similarity=0.042 Sum_probs=31.7
Q ss_pred CeEEEecCCCChhHHHHHHcCC--e-EEEEeCCHHHHHHH
Q 015160 191 PACLVPGAGLGRLALEISHLGF--I-SQGNEFSYYMMICS 227 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA~~Gf--~-V~GnD~S~~ML~~s 227 (412)
.+|||+=||.|.+..-|.+.|+ . |.++|+......+.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty 43 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVY 43 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHH
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHH
Confidence 5899999999999999999997 5 56999999876543
No 307
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.74 E-value=0.024 Score=50.26 Aligned_cols=37 Identities=22% Similarity=0.142 Sum_probs=30.5
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (412)
++.+||+.|+ |.|+.+..+++ .|+.|.+++.+...+.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~ 77 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE 77 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence 6679999994 78888777765 5999999999988764
No 308
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.55 E-value=0.029 Score=55.64 Aligned_cols=40 Identities=23% Similarity=0.148 Sum_probs=33.9
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|||. |.++..+|+ +|. .|.++|.|...+..++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 678999999986 999999988 598 8999999998875443
No 309
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.34 E-value=0.1 Score=50.88 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+|. |.++..||+ +|. .|.++|.|..-+..+
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 212 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA 212 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 567999999985 888999987 598 899999998766443
No 310
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.28 E-value=0.047 Score=53.50 Aligned_cols=40 Identities=20% Similarity=0.144 Sum_probs=33.3
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|||. |.++..+|+ +|. .|.++|.|..-+..++
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~ 232 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAK 232 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 677999999986 889999987 598 6999999998775544
No 311
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.25 E-value=0.67 Score=48.16 Aligned_cols=53 Identities=15% Similarity=0.159 Sum_probs=41.0
Q ss_pred HHHHHhhCCCCCC---CCCCeEEEecCCCChhHHHHHHcCCe-EEEEeCCHHHHHHH
Q 015160 175 LEELDALFPNRSK---ESPPACLVPGAGLGRLALEISHLGFI-SQGNEFSYYMMICS 227 (412)
Q Consensus 175 l~~L~~~~p~~~~---~~~~rVLvPGCGlGRLa~eLA~~Gf~-V~GnD~S~~ML~~s 227 (412)
++.|+..+|.... +...+|||+=||.|.+..-|.+.||. |.++|+......+.
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty 126 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTY 126 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHH
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHH
Confidence 4567777764322 24579999999999999999999998 57999999776543
No 312
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.20 E-value=0.061 Score=52.41 Aligned_cols=40 Identities=15% Similarity=0.110 Sum_probs=33.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCe-EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GFI-SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf~-V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |.. |.++|.|..-+..++
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 221 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAK 221 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 667999999876 8889999875 887 999999998775554
No 313
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.05 E-value=0.13 Score=49.33 Aligned_cols=39 Identities=21% Similarity=0.154 Sum_probs=32.3
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+ |.|+.+..+++ .|+.|.+++.+...+..+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL 186 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 6779999998 88998877766 699999999998776443
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.01 E-value=0.033 Score=53.84 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=33.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |+.|.++|.|..-+..++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 207 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR 207 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 678999999985 9999999884 999999999998775443
No 315
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.80 E-value=0.059 Score=53.08 Aligned_cols=40 Identities=15% Similarity=0.177 Sum_probs=32.9
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |+ .|.++|.|..-+..++
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 224 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAE 224 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 677999999976 8888888874 98 8999999988765444
No 316
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.77 E-value=0.14 Score=49.64 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=32.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+|. |.++..+|+ +|..|.+++.|..-+..+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~ 216 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA 216 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH
Confidence 678999999986 888888887 499999999988766433
No 317
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=93.52 E-value=0.41 Score=46.08 Aligned_cols=135 Identities=11% Similarity=0.010 Sum_probs=76.2
Q ss_pred CcchHHHHHHHHHHHhcCcccChhHHhhchHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-CC-eEEEEeC
Q 015160 142 LADVDKVRCIIRNIVRDWAAEGKTERDQCYKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-GF-ISQGNEF 219 (412)
Q Consensus 142 ~~d~~kv~s~L~q~~RDWS~eG~~ER~~~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-Gf-~V~GnD~ 219 (412)
..|...+|..|+.=.-.+ +-.-| ..| -|.++.+.+- . +++.+|||+||+.|..+...|.+ |. .|.|+|+
T Consensus 40 Evdr~~ar~~l~~g~~~g---~yrSR-a~~--KL~ei~ek~~-l--~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdv 110 (267)
T 3p8z_A 40 EVDRTEAKEGLKRGETTH---HAVSR-GSA--KLQWFVERNM-V--IPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTK 110 (267)
T ss_dssp EEECHHHHHHHHTTCCSS---CCSST-HHH--HHHHHHHTTS-S--CCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECC
T ss_pred EeccHHHHHHHhcCCcCC---Cccch-HHH--HHHHHHHhcC-C--CCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEec
Confidence 356666676665433221 11111 122 3444444442 1 36679999999999999866655 54 4889998
Q ss_pred CHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEec-ccccccCCCCCCCCc
Q 015160 220 SYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGG-DFVEVYSDPSQVGAW 298 (412)
Q Consensus 220 S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~G-DF~ely~~~~~~~~f 298 (412)
-..= + +.| .... .-.-+.+.|..| |+..+. ...+
T Consensus 111 G~~g---------h--------e~P---------------------~~~~--s~gwn~v~fk~gvDv~~~~-----~~~~ 145 (267)
T 3p8z_A 111 GGPG---------H--------EEP---------------------VPMS--TYGWNIVKLMSGKDVFYLP-----PEKC 145 (267)
T ss_dssp CSTT---------S--------CCC---------------------CCCC--CTTTTSEEEECSCCGGGCC-----CCCC
T ss_pred CCCC---------c--------cCc---------------------chhh--hcCcCceEEEeccceeecC-----Cccc
Confidence 7511 1 011 1110 011234889999 875443 2569
Q ss_pred cEEEEec-------ccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 299 DAVVTCF-------FIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 299 D~VvT~F-------FIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
|.|++=. .+|-+. -...|+-+.+.|++ |-|+-
T Consensus 146 DtllcDIgeSs~~~~vE~~R-tlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 146 DTLLCDIGESSPSPTVEESR-TIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp SEEEECCCCCCSCHHHHHHH-HHHHHHHHGGGCSS-CEEEE
T ss_pred cEEEEecCCCCCChhhhhhH-HHHHHHHHHHhccc-CCEEE
Confidence 9998643 233222 23467777899999 66653
No 318
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.50 E-value=0.062 Score=52.23 Aligned_cols=40 Identities=13% Similarity=-0.067 Sum_probs=32.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |+ .|.++|.+..-+..++
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 208 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL 208 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH
Confidence 677999999986 8888988885 88 7999999987665443
No 319
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.41 E-value=0.17 Score=50.25 Aligned_cols=41 Identities=20% Similarity=0.065 Sum_probs=33.3
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 188 ESPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
+++.+||+.|+|. |.++..||+. |+ .|.++|.|..-+..++
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 255 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAK 255 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 4678999999865 8888888874 99 8999999998775444
No 320
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.27 E-value=0.12 Score=50.85 Aligned_cols=40 Identities=18% Similarity=0.153 Sum_probs=32.8
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+ +|..|.+++.|..-+..++
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~ 235 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK 235 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 678999999984 888888887 5999999999987765443
No 321
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.22 E-value=0.33 Score=47.62 Aligned_cols=41 Identities=17% Similarity=0.121 Sum_probs=33.3
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 188 ESPPACLVPGAG-LGRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
+++.+||+.|+| .|.++..+|+. |+ .|.++|.|..-+..++
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~ 235 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK 235 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 367899999997 58899888875 98 7999999987775444
No 322
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.14 E-value=0.24 Score=47.98 Aligned_cols=40 Identities=20% Similarity=0.146 Sum_probs=32.9
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+ +|+.|.++|.|..-+..++
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 209 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK 209 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 567999999885 888888887 5999999999988765443
No 323
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.85 E-value=0.071 Score=51.29 Aligned_cols=38 Identities=18% Similarity=0.151 Sum_probs=32.0
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (412)
++.+||+.|+ |.|.++..+|+ .|+.|.+++.|..-+..
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 189 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRF 189 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 6789999998 78999888876 59999999999876543
No 324
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.69 E-value=0.36 Score=47.19 Aligned_cols=40 Identities=20% Similarity=0.048 Sum_probs=32.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..||+. |. .|.++|.|..-+..++
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 233 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI 233 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH
Confidence 677999999874 8888888874 98 7999999987765443
No 325
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=92.68 E-value=0.11 Score=50.33 Aligned_cols=39 Identities=21% Similarity=0.133 Sum_probs=32.9
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+ |.|.++..+|+ +|+.|.+++.+..-+..+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~ 207 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA 207 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 6779999998 78999888876 699999999998776543
No 326
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.65 E-value=0.11 Score=49.92 Aligned_cols=38 Identities=18% Similarity=0.192 Sum_probs=32.2
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (412)
++.+||+.|+ |.|.++..+|+ +|+.|.+++.|..-+..
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~ 195 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 6779999997 78999888877 69999999999877643
No 327
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=92.64 E-value=0.11 Score=51.27 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=33.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|||. |.++..||+ +|. .|.++|.|..-+..++
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAK 227 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH
Confidence 677999999976 899999988 488 6999999998775444
No 328
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.51 E-value=0.059 Score=52.11 Aligned_cols=40 Identities=20% Similarity=0.158 Sum_probs=32.8
Q ss_pred CCCCeEEEecCC--CChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 188 ESPPACLVPGAG--LGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 188 ~~~~rVLvPGCG--lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
+++.+||+.|+| .|.++..+|+ +|..|.+++.|..-+..+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 185 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL 185 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 367899999986 8999998887 599999999987765443
No 329
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.47 E-value=0.36 Score=47.14 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=32.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+ +|. .|.++|.|..-+..++
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 234 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 234 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 677999999874 888888887 598 7999999987765443
No 330
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.33 E-value=0.34 Score=46.12 Aligned_cols=38 Identities=13% Similarity=0.197 Sum_probs=31.2
Q ss_pred CCCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 015160 188 ESPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMIC 226 (412)
Q Consensus 188 ~~~~rVLvPGCG-lGRLa~eLA~~-Gf~V~GnD~S~~ML~~ 226 (412)
+++.+||+.|+| .|.++..+|+. |+.|.+++ |..-+..
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~ 180 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQAL 180 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHH
Confidence 467899999997 58899999875 99999999 8765543
No 331
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.22 E-value=0.22 Score=48.65 Aligned_cols=41 Identities=17% Similarity=0.073 Sum_probs=33.0
Q ss_pred CCCCeEEEecCCC-ChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015160 188 ESPPACLVPGAGL-GRLALEISHL-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 188 ~~~~rVLvPGCGl-GRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (412)
+++.+||+.|+|. |.++..+|+. |+.|.+++.|..-+..++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 230 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAF 230 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH
Confidence 3678999999885 8888888774 999999999987665443
No 332
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.13 E-value=0.38 Score=46.87 Aligned_cols=40 Identities=18% Similarity=0.165 Sum_probs=32.2
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |. .|.++|.|..-+..++
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~ 232 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAK 232 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 677999999875 8888888874 98 7999999987765443
No 333
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.12 E-value=0.47 Score=46.36 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=32.1
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+ +|. .|.++|.|..-+..++
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~ 233 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 233 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 678999999875 888888887 598 7999999987765443
No 334
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.04 E-value=0.21 Score=47.54 Aligned_cols=37 Identities=22% Similarity=0.225 Sum_probs=30.4
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015160 192 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (412)
+||+.|+ |.|.++..+|+. |..|.+++-|..-+..++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~ 188 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK 188 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4999997 789999999875 999999999887664433
No 335
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.95 E-value=0.13 Score=49.86 Aligned_cols=39 Identities=28% Similarity=0.313 Sum_probs=31.4
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf-~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+| .|.++..+|+ +|+ .|.+.+.|..-+..+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~ 208 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA 208 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 56789999987 4888888877 599 899999998766443
No 336
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.95 E-value=0.076 Score=51.12 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=32.6
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+ |.|.++..+|+ +|..|.+++.+..-+..++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 190 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK 190 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 6789999994 78999888877 5999999999987765443
No 337
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=91.67 E-value=0.5 Score=46.19 Aligned_cols=39 Identities=18% Similarity=0.113 Sum_probs=31.7
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCC-eEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISH-LGF-ISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf-~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+| .|.++..||+ +|. .|.++|.|..-+..+
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 236 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA 236 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 67899999987 4888888887 498 799999998766543
No 338
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=91.67 E-value=0.16 Score=49.23 Aligned_cols=40 Identities=23% Similarity=0.164 Sum_probs=32.7
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 227 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (412)
+++.+||+.|+ |.|.++..+|+. |+.|.+++.+..-+..+
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 200 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV 200 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 36789999997 789999888774 99999999988766433
No 339
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.63 E-value=0.15 Score=49.38 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=31.9
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc---CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL---GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~---Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |+.|.+++.|..-+..++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~ 213 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFAL 213 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH
Confidence 456999999874 8888888874 999999999987765433
No 340
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.56 E-value=0.21 Score=47.75 Aligned_cols=91 Identities=18% Similarity=0.239 Sum_probs=54.7
Q ss_pred ceeEEecccccccCCCCCCCCccEEEEe--cccCC------------------hhhHHHHHHHHHHhccCCcEEE-EecC
Q 015160 277 GFSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------------AHNIVEYIEIISRILKDGGVWI-NLGP 335 (412)
Q Consensus 277 ~~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt------------------a~Ni~~yl~~I~~~LKPGG~wI-N~GP 335 (412)
...++.||.+++... ...++||+|||. |+... ...+.+.++.++++|||||.++ ++|.
T Consensus 21 ~~~i~~gD~~~~l~~-l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLAS-FPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTT-SCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCEEEECcHHHHHhh-CCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 368899999984321 125799999997 44211 0113456778899999999874 4554
Q ss_pred cchhhhhccCCCCCcccCCC-HHHHHHHHHhCCCEEEEE
Q 015160 336 LLYHFADLYGQEDEMSIELS-LEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 336 Llyh~~~~~g~~~~~~ieLS-~EEL~~ll~~~GFeii~e 373 (412)
....... .|. ...++ .+++..++++.||.+..+
T Consensus 100 ~~~~~~~-~g~----~~~~~~~~~l~~~~~~~Gf~~~~~ 133 (297)
T 2zig_A 100 VAVARRR-FGR----HLVFPLHADIQVRCRKLGFDNLNP 133 (297)
T ss_dssp EEEECC---------EEEECHHHHHHHHHHHTTCEEEEE
T ss_pred Ccccccc-CCc----ccccccHHHHHHHHHHcCCeeecc
Confidence 3211000 000 00122 467888999999987763
No 341
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.54 E-value=0.081 Score=50.79 Aligned_cols=40 Identities=23% Similarity=0.166 Sum_probs=32.7
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.| .|.|.++..+|+ +|+.|.+++.|..-+..++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 182 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK 182 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 678999998 478999988877 4999999999987765443
No 342
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.03 E-value=0.18 Score=48.74 Aligned_cols=39 Identities=15% Similarity=0.233 Sum_probs=31.7
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+| .|.++..+|+ +|+.|.+++.|..-+..+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 204 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 204 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 56799999986 6888888876 599999999998776443
No 343
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=90.89 E-value=0.46 Score=46.20 Aligned_cols=41 Identities=12% Similarity=-0.073 Sum_probs=37.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHh
Q 015160 189 SPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSF 229 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~f 229 (412)
++..||||=||.|..+....++|....|+|++..+...+.-
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~gr~~ig~e~~~~~~~~~~~ 292 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERESRKWISFEMKPEYVAASAF 292 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCEEEEEESCHHHHHHHHG
T ss_pred CCCEEEECCCCCCHHHHHHHHcCCCEEEEeCCHHHHHHHHH
Confidence 56799999999999999999999999999999999877663
No 344
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.87 E-value=0.6 Score=45.44 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=31.8
Q ss_pred CCCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (412)
+++.+||+.|+ |.|..+..+|+ +|+.|.+++.+..-+..
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~ 210 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH
Confidence 36779999997 78888887766 59999999999876643
No 345
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=90.82 E-value=0.13 Score=48.68 Aligned_cols=37 Identities=19% Similarity=0.243 Sum_probs=31.0
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (412)
++.+||+.|+ |.|.++..+|+ +|+.|.+++-+..-+.
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~ 164 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA 164 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 6779999998 78999888876 5999999999876653
No 346
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.80 E-value=0.2 Score=48.33 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=33.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc--CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL--GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~--Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..||+. |..|.++|.|..-+..++
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~ 213 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAR 213 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 677999999976 8899999875 789999999998775444
No 347
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=90.74 E-value=0.44 Score=47.62 Aligned_cols=36 Identities=11% Similarity=-0.189 Sum_probs=32.2
Q ss_pred CCeEEEecCCCChhHHHHHHc--CCeEEEEeCCHHHHH
Q 015160 190 PPACLVPGAGLGRLALEISHL--GFISQGNEFSYYMMI 225 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eLA~~--Gf~V~GnD~S~~ML~ 225 (412)
+..||++|.|+|.|+..|+.+ +-.|+++|+...++-
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~ 96 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYK 96 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHH
Confidence 468999999999999999987 568999999998763
No 348
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.72 E-value=0.45 Score=46.47 Aligned_cols=39 Identities=21% Similarity=0.150 Sum_probs=32.1
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.| .|.|.++..+|+ +|+.|.+++.+..-+..+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~ 204 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL 204 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 677999999 578999988876 599999999998766433
No 349
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=90.68 E-value=0.18 Score=48.42 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=31.1
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (412)
++.+||+.|+ |.|..+..+++ +|+.|.+++.+..-+..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~ 185 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET 185 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 6779999995 88998877765 69999999999866543
No 350
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.63 E-value=0.77 Score=48.87 Aligned_cols=74 Identities=20% Similarity=0.277 Sum_probs=51.1
Q ss_pred ceeEEecccccccCC-CC-CCCCccEEEEecccCCh-hhH------HHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 277 GFSMCGGDFVEVYSD-PS-QVGAWDAVVTCFFIDTA-HNI------VEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 277 ~~s~~~GDF~ely~~-~~-~~~~fD~VvT~FFIDta-~Ni------~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
.+.++.||..+.... +. ..+.+|++ |+|-. +.. .++|..+.+++||||.+..++
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~----flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~------------- 211 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAW----FLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT------------- 211 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEE----EECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC-------------
T ss_pred EEEEEccCHHHHHhhcccccCCceeEE----EECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc-------------
Confidence 488999999886431 00 13567776 66632 111 588999999999999987421
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEEEe
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEKEK 374 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~e~ 374 (412)
....+++.+.++||.+.+..
T Consensus 212 -------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------CCHHHHHHHHHTTCEEEEEE
T ss_pred -------CcHHHHHHHHhCCeEEEecc
Confidence 12578899999999988744
No 351
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.43 E-value=0.18 Score=48.26 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=31.7
Q ss_pred CCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.| .|.|..+..+++ +|+.|.+++.+..-+..+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~ 181 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA 181 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 677999999 578988877766 699999999998776443
No 352
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.39 E-value=0.077 Score=51.34 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=29.4
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCC-eEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGF-ISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf-~V~GnD~S~~ML 224 (412)
++.+||+.|+|. |.++..+|+ +|. .|.+++.|..-+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~ 202 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRL 202 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 456899999864 888888887 599 899999998654
No 353
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.26 E-value=0.3 Score=48.09 Aligned_cols=40 Identities=20% Similarity=0.139 Sum_probs=32.0
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-C-CeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISHL-G-FISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~~-G-f~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+| .|.++..||+. | ..|.+++.|..-+..++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 67799999976 58888888874 8 69999999987765443
No 354
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.16 E-value=0.44 Score=47.76 Aligned_cols=40 Identities=25% Similarity=0.189 Sum_probs=32.5
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICS 227 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s 227 (412)
+++.+||+.|+ |.|.++..+|+. |..|.+++-|..-+..+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 36789999997 679998888775 99999999888776543
No 355
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.89 E-value=0.3 Score=47.57 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=32.0
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 188 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
+++.+||+.| .|.|..+..+++ +|+.|.+++.|..-+..+
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 203 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA 203 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3678999998 478888877765 599999999998776543
No 356
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.79 E-value=0.18 Score=48.85 Aligned_cols=37 Identities=30% Similarity=0.265 Sum_probs=30.5
Q ss_pred CC--CeEEEecC--CCChhHHHHHH-cCC-eEEEEeCCHHHHH
Q 015160 189 SP--PACLVPGA--GLGRLALEISH-LGF-ISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~--~rVLvPGC--GlGRLa~eLA~-~Gf-~V~GnD~S~~ML~ 225 (412)
++ .+||+.|+ |.|.++..+++ +|+ .|.+++.+..-+.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~ 200 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCI 200 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHH
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHH
Confidence 56 79999997 78998887766 699 9999999976553
No 357
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.78 E-value=0.35 Score=47.04 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=32.7
Q ss_pred CCCCeEEEec--CCCChhHHHHHH-cCCeEEEEeCCHHHHHHHH
Q 015160 188 ESPPACLVPG--AGLGRLALEISH-LGFISQGNEFSYYMMICSS 228 (412)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~-~Gf~V~GnD~S~~ML~~s~ 228 (412)
+++.+||+.| .|.|.++..+|+ +|+.|.+++.|..-+..++
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 209 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE 209 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4678999995 468999888877 4999999999998765443
No 358
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=89.55 E-value=0.25 Score=47.19 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=28.5
Q ss_pred eEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015160 192 ACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMI 225 (412)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (412)
+||+.|+ |.|.++..+|+ +|+.|.+++-+..-+.
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~ 188 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD 188 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 7999997 78999999887 5999999998865543
No 359
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.44 E-value=0.46 Score=47.99 Aligned_cols=41 Identities=22% Similarity=0.093 Sum_probs=32.9
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (412)
+++.+||+.|+ |.|.++..+|+. |+.|.+++-|..=+..++
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~~ 270 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR 270 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 36789999997 689999999875 999999998887665443
No 360
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=89.33 E-value=1.6 Score=38.36 Aligned_cols=33 Identities=18% Similarity=-0.015 Sum_probs=24.6
Q ss_pred eEEEecC--CCChh-HHHHHHcCCeEEEEeCCHHHH
Q 015160 192 ACLVPGA--GLGRL-ALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 192 rVLvPGC--GlGRL-a~eLA~~Gf~V~GnD~S~~ML 224 (412)
+||+.|+ |+|+. +..|+++|+.|.+++-+..-+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 6999996 34443 566777899999999887543
No 361
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=89.01 E-value=1.5 Score=39.25 Aligned_cols=36 Identities=22% Similarity=0.088 Sum_probs=26.9
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+.|+ |+|+ ++..|+++|+.|.+++-+..-+
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~ 58 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQG 58 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHH
Confidence 4679999997 4454 4667778899999999887543
No 362
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.28 E-value=0.38 Score=46.01 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=28.1
Q ss_pred eEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015160 192 ACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMI 225 (412)
Q Consensus 192 rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (412)
+||+.|+ |.|.++..+|+. |+.|.+++-|..-+.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~ 189 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD 189 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 7999997 789998888774 999999998865543
No 363
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=87.71 E-value=1.7 Score=38.35 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=21.3
Q ss_pred eEEEecCCCChhH----HHHHHcCCeEEEEeCCH
Q 015160 192 ACLVPGAGLGRLA----LEISHLGFISQGNEFSY 221 (412)
Q Consensus 192 rVLvPGCGlGRLa----~eLA~~Gf~V~GnD~S~ 221 (412)
+||+.|+ +|.++ ..|+++|+.|.+++-+.
T Consensus 2 ~ilItGa-tG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 2 KIFIVGS-TGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEEEST-TSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred eEEEECC-CCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 7999994 45554 45556699999998775
No 364
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.67 E-value=0.63 Score=45.00 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=30.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMIC 226 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~ 226 (412)
+++.+||+.|+ |.|.++..+|+. |+.|.++ .|..-+..
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~ 189 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY 189 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence 36789999994 679999888875 9999999 77766543
No 365
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.56 E-value=0.46 Score=46.15 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=27.0
Q ss_pred CeEEEecCC-CChhH-HHHH-H-cCCe-EEEEeCCHH
Q 015160 191 PACLVPGAG-LGRLA-LEIS-H-LGFI-SQGNEFSYY 222 (412)
Q Consensus 191 ~rVLvPGCG-lGRLa-~eLA-~-~Gf~-V~GnD~S~~ 222 (412)
.+||+.|+| .|.++ ..+| + +|+. |.+++-+..
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~ 210 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDR 210 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcc
Confidence 799999976 48888 8888 5 5997 999999875
No 366
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=87.33 E-value=1.8 Score=39.58 Aligned_cols=36 Identities=11% Similarity=-0.017 Sum_probs=28.7
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCG----lGR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++ .|+ ++..|+++|+.|..++.+....
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~ 46 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLE 46 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHH
Confidence 45689999965 666 6889999999999998876443
No 367
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.25 E-value=0.98 Score=43.89 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=29.6
Q ss_pred CCCeEEEecCC-CChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISHL-GFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (412)
++.+||+.|+| .|.++..+|+. |..|.+++-|..-+.
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~ 218 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRE 218 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence 56799999987 47778888764 999999999876553
No 368
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=86.91 E-value=11 Score=37.98 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=32.7
Q ss_pred CCCeEEEecCCCChhHHHHHHcC--Ce-----EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLG--FI-----SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G--f~-----V~GnD~S~~ML~~s~ 228 (412)
+..+||++=||.|.+..-|-+.| +. |.++|+......+.+
T Consensus 9 ~~lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~ 55 (403)
T 4dkj_A 9 KVIKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYV 55 (403)
T ss_dssp EEEEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHH
T ss_pred ccceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHH
Confidence 45799999999999998888888 33 568999998876544
No 369
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.75 E-value=8 Score=43.71 Aligned_cols=39 Identities=15% Similarity=-0.068 Sum_probs=33.5
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-e-EEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-I-SQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~-V~GnD~S~~ML~~s 227 (412)
...++||+=||.|.+..-|.+.|+ . |.|+|+......+.
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty 579 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAF 579 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHH
T ss_pred CCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHH
Confidence 567999999999999999999998 4 66999999876543
No 370
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=86.58 E-value=0.73 Score=45.06 Aligned_cols=37 Identities=16% Similarity=0.040 Sum_probs=29.0
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (412)
++.+||+.|+|. |.++..+|+ +|+.|.+++-|..-+.
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~ 225 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKE 225 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 567999999864 777777776 4999999999876553
No 371
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=86.57 E-value=0.92 Score=44.34 Aligned_cols=39 Identities=23% Similarity=0.315 Sum_probs=31.9
Q ss_pred CCCeEEEec-C-CCChhHHHHHHc--CCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPG-A-GLGRLALEISHL--GFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPG-C-GlGRLa~eLA~~--Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.| + |.|.++..+|+. |..|.+++-+..-+..+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~ 213 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV 213 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH
Confidence 567899998 4 569999999985 88999999998766443
No 372
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=86.25 E-value=0.41 Score=40.68 Aligned_cols=29 Identities=21% Similarity=0.239 Sum_probs=26.2
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
.|+++|+|...| |..|+++|++|+-+|-+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~ 34 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKS 34 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 499999999998 78899999999999954
No 373
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.14 E-value=1.8 Score=41.98 Aligned_cols=88 Identities=19% Similarity=0.320 Sum_probs=54.1
Q ss_pred eeEEecccccccCCCCCCCCccEEEEe--cccCC------------hhhHHHHHHHHHHhccCCcEEE-EecCcchhhhh
Q 015160 278 FSMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDT------------AHNIVEYIEIISRILKDGGVWI-NLGPLLYHFAD 342 (412)
Q Consensus 278 ~s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDt------------a~Ni~~yl~~I~~~LKPGG~wI-N~GPLlyh~~~ 342 (412)
..++.||.+++... -..++||+|+|- |.... ...+.+.|+.++++|||||.++ ..+.. | ..
T Consensus 15 ~~ii~gD~~~~l~~-l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~-~--~~ 90 (323)
T 1boo_A 15 GSMYIGDSLELLES-FPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA-Y--MK 90 (323)
T ss_dssp EEEEESCHHHHGGG-SCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC-E--ET
T ss_pred ceEEeCcHHHHHhh-CCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE-e--cC
Confidence 67889998774321 125789999987 54331 1236678889999999999875 34421 1 00
Q ss_pred ccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 343 LYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 343 ~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
| .+ ..-......+..+++..||.+..+
T Consensus 91 --g-~~-~~~~~~~~~i~~~~~~~Gf~~~~~ 117 (323)
T 1boo_A 91 --G-VP-ARSIYNFRVLIRMIDEVGFFLAED 117 (323)
T ss_dssp --T-EE-EECCHHHHHHHHHHHTTCCEEEEE
T ss_pred --C-Cc-ccccchHHHHHHHHHhCCCEEEEE
Confidence 0 00 000123456777888999987753
No 374
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.62 E-value=0.62 Score=46.35 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=25.4
Q ss_pred CCCeEEEecCCC-ChhHHH-HHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGL-GRLALE-ISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~e-LA~~Gf~V~GnD~S~~ML 224 (412)
++.+|+++|+|. |+.+.. +...|..|.+.|.+..-+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l 204 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKL 204 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence 567999999853 333333 334599999999998765
No 375
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=85.36 E-value=1.2 Score=43.35 Aligned_cols=51 Identities=18% Similarity=-0.022 Sum_probs=40.8
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCH---HHHHHHH
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSY---YMMICSS 228 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~---~ML~~s~ 228 (412)
+++.|-+.+. .++..||||=||.|..+....++|....|+|++. .+...+.
T Consensus 231 l~~~~i~~~~----~~~~~vlDpF~GsGtt~~aa~~~~r~~ig~e~~~~~~~~~~~~~ 284 (319)
T 1eg2_A 231 VIERLVRALS----HPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQL 284 (319)
T ss_dssp HHHHHHHHHS----CTTCEEEETTCTTCHHHHHHHHHTCEEEEEESSTHHHHHHHHHH
T ss_pred HHHHHHHHhC----CCCCEEEecCCCCCHHHHHHHHcCCcEEEEECCccHHHHHHHHH
Confidence 4555554442 2567999999999999999999999999999999 7776554
No 376
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=85.25 E-value=7.6 Score=37.48 Aligned_cols=40 Identities=18% Similarity=0.144 Sum_probs=34.7
Q ss_pred CCCCeEEEecCCCChhHHHHHHcCCeE---EEEeCCHHHHHHH
Q 015160 188 ESPPACLVPGAGLGRLALEISHLGFIS---QGNEFSYYMMICS 227 (412)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~Gf~V---~GnD~S~~ML~~s 227 (412)
+...+|||+=||.|.+...|.+.|+.+ .++|++.....+.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty 56 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVG 56 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHH
Confidence 467899999999999999999999986 7999999876543
No 377
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=84.97 E-value=6.6 Score=37.85 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=59.0
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccC
Q 015160 190 PPACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIP 265 (412)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf--~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iP 265 (412)
..+|.++|+|. |.++..|++.|+ .|.+.|.+..-+..+. +.. +
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-------~~G-----------------------~--- 79 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-------DLG-----------------------I--- 79 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-------HTT-----------------------S---
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-------HCC-----------------------C---
Confidence 36899999885 456888889999 9999999987653222 000 0
Q ss_pred CCCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecC
Q 015160 266 DIHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP 335 (412)
Q Consensus 266 Dv~p~~~~~~~~~s~~~GDF~e-ly~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GP 335 (412)
..-...|..+ .. ..-|+|+.+--.+ .+.++++.+...|+||.+++.++-
T Consensus 80 ------------~~~~~~~~~~~~~------~~aDvVilavp~~---~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 80 ------------IDEGTTSIAKVED------FSPDFVMLSSPVR---TFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp ------------CSEEESCTTGGGG------GCCSEEEECSCGG---GHHHHHHHHHHHSCTTCEEEECCS
T ss_pred ------------cchhcCCHHHHhh------ccCCEEEEeCCHH---HHHHHHHHHhhccCCCcEEEECCC
Confidence 0001112222 21 3468887765433 356778888888999998887543
No 378
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=84.88 E-value=0.92 Score=44.76 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=25.7
Q ss_pred CCCeEEEecCC-CChhH-HHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAG-LGRLA-LEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa-~eLA~~Gf~V~GnD~S~~ML 224 (412)
++.+|++.|+| .|+.+ ..++..|+.|++.|.+..-+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~ 202 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRL 202 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 45799999985 23333 33345699999999998655
No 379
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.75 E-value=0.77 Score=44.95 Aligned_cols=37 Identities=22% Similarity=0.284 Sum_probs=29.5
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCHHHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSYYMMI 225 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~~ML~ 225 (412)
+++.+||+.|+ |.|.++..+|+. |+.|.+.- |..=+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~ 202 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD 202 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH
Confidence 36789999998 489999999875 99998884 765543
No 380
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=84.69 E-value=1.3 Score=43.11 Aligned_cols=110 Identities=11% Similarity=-0.044 Sum_probs=71.3
Q ss_pred hHHHHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccC
Q 015160 171 YKPILEELDALFPNRSKESPPACLVPGAGLGRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNC 250 (412)
Q Consensus 171 y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~s 250 (412)
..|+++.|... .+..+||.=+|+|.++.|+.+.|-.++.+|.+..-+.+-+ +.
T Consensus 80 l~~yf~~l~~~-------n~~~~LDlfaGSGaLgiEaLS~~d~~vfvE~~~~a~~~L~---~N----------------- 132 (283)
T 2oo3_A 80 FLEYISVIKQI-------NLNSTLSYYPGSPYFAINQLRSQDRLYLCELHPTEYNFLL---KL----------------- 132 (283)
T ss_dssp GHHHHHHHHHH-------SSSSSCCEEECHHHHHHHHSCTTSEEEEECCSHHHHHHHT---TS-----------------
T ss_pred HHHHHHHHHHh-------cCCCceeEeCCcHHHHHHHcCCCCeEEEEeCCHHHHHHHH---HH-----------------
Confidence 34788888774 2346899999999999999998878999999997763211 00
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCceeEEeccccc-ccCCCCCCCCccEEEEecccCCh----hhHHHHHHHHHH--h
Q 015160 251 NSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVE-VYSDPSQVGAWDAVVTCFFIDTA----HNIVEYIEIISR--I 323 (412)
Q Consensus 251 n~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~e-ly~~~~~~~~fD~VvT~FFIDta----~Ni~~yl~~I~~--~ 323 (412)
... ..++.+..+|... +........+||+| |||.. ....+.++.+.+ .
T Consensus 133 -l~~--------------------~~~~~V~~~D~~~~L~~l~~~~~~fdLV----fiDPPYe~k~~~~~vl~~L~~~~~ 187 (283)
T 2oo3_A 133 -PHF--------------------NKKVYVNHTDGVSKLNALLPPPEKRGLI----FIDPSYERKEEYKEIPYAIKNAYS 187 (283)
T ss_dssp -CCT--------------------TSCEEEECSCHHHHHHHHCSCTTSCEEE----EECCCCCSTTHHHHHHHHHHHHHH
T ss_pred -hCc--------------------CCcEEEEeCcHHHHHHHhcCCCCCccEE----EECCCCCCCcHHHHHHHHHHHhCc
Confidence 000 1235677778544 22100113569988 67763 245566666665 4
Q ss_pred ccCCcEEEE
Q 015160 324 LKDGGVWIN 332 (412)
Q Consensus 324 LKPGG~wIN 332 (412)
+.|+|+++-
T Consensus 188 r~~~Gi~v~ 196 (283)
T 2oo3_A 188 KFSTGLYCV 196 (283)
T ss_dssp HCTTSEEEE
T ss_pred cCCCeEEEE
Confidence 668999983
No 381
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.54 E-value=1.8 Score=42.13 Aligned_cols=32 Identities=22% Similarity=0.146 Sum_probs=26.4
Q ss_pred CCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCH
Q 015160 190 PPACLVPGAG-LGRLALEISH-LGFISQGNEFSY 221 (412)
Q Consensus 190 ~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~ 221 (412)
+.+||+.|+| .|.++..+|+ +|+.|.+++.+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~ 214 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRRE 214 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 6799999985 4777777776 599999999986
No 382
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=84.54 E-value=0.3 Score=59.88 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=27.0
Q ss_pred CCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcc-hhhhhccC-----CCCCcccCCCHHHHHHHHHhCCC
Q 015160 295 VGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLL-YHFADLYG-----QEDEMSIELSLEDVKRVALHYGF 368 (412)
Q Consensus 295 ~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLl-yh~~~~~g-----~~~~~~ieLS~EEL~~ll~~~GF 368 (412)
...||+|+...-+....++.+.+..++++|||||++|-..+.. +.+....+ ..+ ..-.++.++..+++...||
T Consensus 1309 ~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~~~~~~~~r~-~~~~~~~~~w~~~l~~~gf 1387 (2512)
T 2vz8_A 1309 LGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMVGFLTSPEQG-GRHLLSQDQWESLFAGASL 1387 (2512)
T ss_dssp ---CCEEEEECC--------------------CCEEEEEEC---------------------------CTTTTSSTTTTE
T ss_pred CCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccccccccccccccccccc-CCcccCHHHHHHHHHhCCC
Confidence 3569999988888877889999999999999999987532110 00000000 000 0113566667777888999
Q ss_pred EEEEE
Q 015160 369 EFEKE 373 (412)
Q Consensus 369 eii~e 373 (412)
..+..
T Consensus 1388 ~~~~~ 1392 (2512)
T 2vz8_A 1388 HLVAL 1392 (2512)
T ss_dssp EEEEE
T ss_pred ceeee
Confidence 87653
No 383
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=83.79 E-value=4 Score=38.38 Aligned_cols=37 Identities=16% Similarity=0.319 Sum_probs=30.1
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHH
Q 015160 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICS 227 (412)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s 227 (412)
.+|.++|+|+ +.+|..|++.|+.|+..|.+..-+..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAA 43 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 4799999986 346778888999999999999876443
No 384
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=83.77 E-value=0.72 Score=46.62 Aligned_cols=37 Identities=30% Similarity=0.425 Sum_probs=27.4
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eL-A~~Gf~V~GnD~S~~ML~ 225 (412)
++.+|+++|+|. |+.+..+ ...|..|++.|.+..-+.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~ 221 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAE 221 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 567999999983 5554444 445999999999986543
No 385
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=83.59 E-value=4.3 Score=38.91 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
...+|.++|+|. |+ ++..|++.|+.|++.|.+..-+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 67 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARA 67 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 346899999984 43 5778889999999999998654
No 386
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=83.51 E-value=12 Score=34.62 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=25.8
Q ss_pred CCCeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~M 223 (412)
++.+||+-|+ ++|+ ++..|+++|+.|.+++-+..-
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 47 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASK 47 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 4578999997 3343 355667789999999988654
No 387
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=83.45 E-value=3.3 Score=39.23 Aligned_cols=35 Identities=14% Similarity=0.036 Sum_probs=28.0
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 015160 190 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
..+|.++|+|. +.++..|++.|+.|++.|.+..-+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~ 43 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQAC 43 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 45899998874 335777888899999999998654
No 388
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=83.08 E-value=4.5 Score=35.13 Aligned_cols=32 Identities=16% Similarity=-0.027 Sum_probs=24.4
Q ss_pred eEEEecC--CCCh-hHHHHHHcCCeEEEEeCCHHH
Q 015160 192 ACLVPGA--GLGR-LALEISHLGFISQGNEFSYYM 223 (412)
Q Consensus 192 rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~~M 223 (412)
+||+.|+ |+|+ ++..|+++|+.|.+++-+..-
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 36 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGK 36 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchh
Confidence 7999996 3455 466678889999999887644
No 389
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=82.96 E-value=2.7 Score=41.64 Aligned_cols=93 Identities=10% Similarity=0.058 Sum_probs=58.6
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
..+|.++|+|. | .++..|++.|+.|++.|.+..-+.... +. .+.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~-------~~-----------------------g~~---- 67 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALE-------RE-----------------------GIA---- 67 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-------TT-----------------------TCB----
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-------HC-----------------------CCE----
Confidence 46899999873 3 347778888999999999987643211 00 000
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGP 335 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GP 335 (412)
...|..++.. .....|+|+.+.--+ .+.+.++.+...|+||-++|+.+-
T Consensus 68 -------------~~~s~~e~~~---~a~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiId~st 116 (358)
T 4e21_A 68 -------------GARSIEEFCA---KLVKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVIDGGN 116 (358)
T ss_dssp -------------CCSSHHHHHH---HSCSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEEECSS
T ss_pred -------------EeCCHHHHHh---cCCCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEEeCCC
Confidence 0012222211 013458888765433 467788888899999999997544
No 390
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=82.81 E-value=0.56 Score=46.94 Aligned_cols=31 Identities=29% Similarity=0.276 Sum_probs=27.2
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015160 191 PACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (412)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (412)
++|+|+|+|.+.| |+.||++|++|+-+|-+.
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 4799999999999 788999999999998764
No 391
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=82.51 E-value=7.2 Score=36.63 Aligned_cols=35 Identities=11% Similarity=-0.017 Sum_probs=28.2
Q ss_pred CCCeEEEecCC----CCh-hHHHHHHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAG----LGR-LALEISHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCG----lGR-La~eLA~~Gf~V~GnD~S~~M 223 (412)
.+.+||+-|++ .|+ ++..|+++|+.|..++.+..-
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~ 69 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL 69 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 45689999965 555 688899999999999988643
No 392
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=82.45 E-value=0.9 Score=45.13 Aligned_cols=36 Identities=25% Similarity=0.391 Sum_probs=26.7
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA-~~Gf~V~GnD~S~~ML 224 (412)
++.+|+++|+|. |+.+..++ ..|..|++.|.+..-+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~ 208 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATK 208 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 567999999874 55555554 4599999999987544
No 393
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=82.43 E-value=8.6 Score=39.15 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=31.8
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHH
Q 015160 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMIC 226 (412)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~ 226 (412)
+-.+|.++|+|+ +.+|..|++.|+.|++.|.+..-+..
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~ 75 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDA 75 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 345899999997 45788999999999999999987643
No 394
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=82.40 E-value=1.1 Score=45.56 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=27.4
Q ss_pred CCCeEEEecCCC-ChhHHHHH-HcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEIS-HLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA-~~Gf~V~GnD~S~~ML~ 225 (412)
++.+|+++|+|. |..+..++ ..|..|++.|.+..-+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~ 227 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKE 227 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 567999999983 44444443 45999999999986553
No 395
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=82.21 E-value=2.6 Score=39.26 Aligned_cols=76 Identities=12% Similarity=0.131 Sum_probs=47.4
Q ss_pred eEEecccccccCCCCCCCCccEEEEe--cccCCh------------hhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhc
Q 015160 279 SMCGGDFVEVYSDPSQVGAWDAVVTC--FFIDTA------------HNIVEYIEIISRILKDGGVWIN-LGPLLYHFADL 343 (412)
Q Consensus 279 s~~~GDF~ely~~~~~~~~fD~VvT~--FFIDta------------~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~ 343 (412)
.++.||.+++... -..++||+|+|- |..... .-+...|+.++++|||||.++- .++ +
T Consensus 6 ~l~~gD~~~~l~~-l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~d----~--- 77 (260)
T 1g60_A 6 KIHQMNCFDFLDQ-VENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNTP----F--- 77 (260)
T ss_dssp SEEECCHHHHHHH-SCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEECH----H---
T ss_pred eEEechHHHHHHh-ccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcCc----H---
Confidence 4678887664321 124689999886 544311 1245677888999999998753 221 1
Q ss_pred cCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 344 YGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 344 ~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
....+..++...||.+..+
T Consensus 78 -----------~~~~~~~~~~~~gf~~~~~ 96 (260)
T 1g60_A 78 -----------NCAFICQYLVSKGMIFQNW 96 (260)
T ss_dssp -----------HHHHHHHHHHHTTCEEEEE
T ss_pred -----------HHHHHHHHHHhhccceeEE
Confidence 0234566777889987664
No 396
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=82.14 E-value=3.8 Score=42.69 Aligned_cols=37 Identities=19% Similarity=0.114 Sum_probs=25.6
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eL-A~~Gf~V~GnD~S~~ML~ 225 (412)
.+.+|++.|+|. |+.+..+ ...|+.|.+.|.+..-+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~ 311 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINAL 311 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 567999999853 3333232 335999999999986543
No 397
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=81.87 E-value=27 Score=37.54 Aligned_cols=43 Identities=14% Similarity=0.135 Sum_probs=33.4
Q ss_pred CCCeEEEecCCCChhHHHHHHcC------CeE-EEEeCCHHHHHHHHhhhhc
Q 015160 189 SPPACLVPGAGLGRLALEISHLG------FIS-QGNEFSYYMMICSSFILNH 233 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~G------f~V-~GnD~S~~ML~~s~filn~ 233 (412)
+..+|||+=||.|.|+.=|.+.| |.| .++|++..+..+- .+|+
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty--~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSL--KYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHH--HHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHH--HHHC
Confidence 45789999999999988887777 764 5999999876543 3554
No 398
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=81.51 E-value=0.84 Score=44.59 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=28.2
Q ss_pred CCCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHH
Q 015160 188 ESPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMM 224 (412)
Q Consensus 188 ~~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML 224 (412)
+++.+||+.| .|.|.++..+|+. |..|.+.+ |..-+
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~ 220 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDAS 220 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHH
Confidence 3678999999 4679998888764 99999988 55443
No 399
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=81.38 E-value=13 Score=33.83 Aligned_cols=30 Identities=20% Similarity=0.099 Sum_probs=22.9
Q ss_pred CeEEEecCCCChhHHH----HHHcCCeEEEEeCCHH
Q 015160 191 PACLVPGAGLGRLALE----ISHLGFISQGNEFSYY 222 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~e----LA~~Gf~V~GnD~S~~ 222 (412)
.+||+.|| |.++.. |.++|+.|.+++-+..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 58999995 766554 4566999999988764
No 400
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.35 E-value=19 Score=32.32 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~ 46 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAA 46 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4568999997654 35788888999999999988765
No 401
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=81.28 E-value=4.8 Score=39.14 Aligned_cols=85 Identities=9% Similarity=0.037 Sum_probs=51.5
Q ss_pred eeEE-ecccccccCCCCCCCCccEEEEe--cccC------C---hhhHHHHHHHHHHhccCCcEEEE-ecCcchhhhhcc
Q 015160 278 FSMC-GGDFVEVYSDPSQVGAWDAVVTC--FFID------T---AHNIVEYIEIISRILKDGGVWIN-LGPLLYHFADLY 344 (412)
Q Consensus 278 ~s~~-~GDF~ely~~~~~~~~fD~VvT~--FFID------t---a~Ni~~yl~~I~~~LKPGG~wIN-~GPLlyh~~~~~ 344 (412)
..++ .||.+++... -..++||+|+|- |... . ..-+...|..++++|||||+++- .+.. +.
T Consensus 39 ~~l~i~gD~l~~L~~-l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~~~---~~--- 111 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK-LPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGGLQ---YQ--- 111 (319)
T ss_dssp EEEEEECCHHHHHHT-SCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEECSC---CC---
T ss_pred ceEEECCcHHHHHHh-CccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcCcc---cc---
Confidence 4567 8998874321 125789999985 4432 1 11356778888999999998864 2211 10
Q ss_pred CCCCCcccCCCHHHHHHHHHhCC-CEEEEE
Q 015160 345 GQEDEMSIELSLEDVKRVALHYG-FEFEKE 373 (412)
Q Consensus 345 g~~~~~~ieLS~EEL~~ll~~~G-Feii~e 373 (412)
+ + ........+..++...| |.+..+
T Consensus 112 ~--~--~~~~~l~~l~~~i~~~G~~~~~~~ 137 (319)
T 1eg2_A 112 G--E--AGSGDLISIISHMRQNSKMLLANL 137 (319)
T ss_dssp C--C--TTBCCHHHHHHHHHHHCCCEEEEE
T ss_pred c--c--cccccHHHHHHHHhCcccceeEEE
Confidence 0 0 01123456677777778 988764
No 402
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=80.89 E-value=6.9 Score=36.07 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=26.8
Q ss_pred eEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHH
Q 015160 192 ACLVPGAGL--GRLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 192 rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
+|.++|+|. +.++..|++.|++|.+.|.+..-+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~ 36 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTC 36 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 689999885 345677888899999999998654
No 403
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=80.70 E-value=3 Score=41.06 Aligned_cols=228 Identities=14% Similarity=0.141 Sum_probs=121.0
Q ss_pred cccCCCCCCCccccchhHHhhhccccccccCCCCC-------CCCCCCCCCcCCCCCCcchHHHHHHHHHHHhcCccc-C
Q 015160 92 IEYKTASCPGKLENREETNQSCSNDFTDSNGNASS-------PACDWLDPSIQLNVPLADVDKVRCIIRNIVRDWAAE-G 163 (412)
Q Consensus 92 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~g~~~~-------~~~~w~~~~~~~~~~~~d~~kv~s~L~q~~RDWS~e-G 163 (412)
.+-...-.++++-+|.-=+++++..+ |-|+-|. .+++|-.+.. ..-+.==.++.+++.|-+.-- +
T Consensus 36 ~F~eDka~S~e~aLn~ictr~~G~Dl--dSGlfS~p~v~l~y~~~HWdNspg-----~~myG~n~~v~~~l~~r~p~~~~ 108 (320)
T 2hwk_A 36 YFETDKAHSAEIVLNQLCVRFFGLDL--DSGLFSAPTVPLSIRNNHWDNSPS-----PNMYGLNKEVVRQLSRRYPQLPR 108 (320)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHSCCG--GGCTTBSSSEECEEETTEEECCSC-----SCEEBCCHHHHHHHHTTCTTHHH
T ss_pred ccccccccCHHHHHHHHHHHhhcccc--CcccccCCccceeeccccccCCCC-----ccccCcCHHHHHHHHHhCchhhh
Confidence 33445567889999988888887665 4453211 1245654321 111222234566666665421 0
Q ss_pred h---------hHH-hhchHHHHHHHHhhCCCCCCCCCCeEEEe---cCCCChhHHHHHHc-CCeEEEEeCCHHHHHHHHh
Q 015160 164 K---------TER-DQCYKPILEELDALFPNRSKESPPACLVP---GAGLGRLALEISHL-GFISQGNEFSYYMMICSSF 229 (412)
Q Consensus 164 ~---------~ER-~~~y~pIl~~L~~~~p~~~~~~~~rVLvP---GCGlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~f 229 (412)
+ .++ -+.|.|-. ..+|- +|.-...||+ .++.|+....+.+. |+.|.-+| +.|.+
T Consensus 109 ~~~~g~~~~~~~~~~~~~~~~~----n~vP~--NRrlPH~Lv~~~~~~~~~~~~~~~~k~~g~~vl~v~--~~~~~---- 176 (320)
T 2hwk_A 109 AVATGRVYDMNTGTLRNYDPRI----NLVPV--NRRLPHALVLHHNEHPQSDFSSFVSKLKGRTVLVVG--EKLSV---- 176 (320)
T ss_dssp HHHHTCEECTTTSSEECCCTTS----CCSCT--TSCCSSCCCSCCCCCCCCCCHHHHHTSSCSEEEEEE--SCCCC----
T ss_pred hcccCeEEeccCCccccCCccc----ceecc--ccCCCcchhhhhhccCCCCHHHHHhhCCCcEEEEEe--ccccc----
Confidence 0 000 00111110 01111 2233345554 68899998888876 88887774 33321
Q ss_pred hhhcccccccccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEE-ecccccccCCCCCCCCccEEEEec---
Q 015160 230 ILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMC-GGDFVEVYSDPSQVGAWDAVVTCF--- 305 (412)
Q Consensus 230 iln~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~-~GDF~ely~~~~~~~~fD~VvT~F--- 305 (412)
..+.-.| |+| + .+..+. .+||.+-. ..+.+|+|++-.
T Consensus 177 ----p~k~v~w-i~P-------------------i-----------~GAt~~~~lDfg~p~----~~~k~DvV~SDMApn 217 (320)
T 2hwk_A 177 ----PGKMVDW-LSD-------------------R-----------PEATFRARLDLGIPG----DVPKYDIIFVNVRTP 217 (320)
T ss_dssp ----TTSEEEE-EES-------------------S-----------TTCSEECCGGGCSCT----TSCCEEEEEEECCCC
T ss_pred ----CCceeEe-ecc-------------------C-----------CCceeecccccCCcc----ccCcCCEEEEcCCCC
Confidence 1111111 122 1 123344 78887632 247799999763
Q ss_pred --------ccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEEeecc
Q 015160 306 --------FIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKEKTIE 377 (412)
Q Consensus 306 --------FIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e~~i~ 377 (412)
++|.+.-+.-.++-..++|||||.+|-. .|.++| -..++|...+++ -|+.++.-...
T Consensus 218 ~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~K---vyggaD-----------r~se~lv~~LaR-~F~~Vr~vKP~ 282 (320)
T 2hwk_A 218 YKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSI---GYGYAD-----------RASESIIGAIAR-QFKFSRVCKPK 282 (320)
T ss_dssp CCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEE---ECCCCS-----------HHHHHHHHHHHT-TEEEEEEECCT
T ss_pred CCCccccccchHHHHHHHHHHHHHHhcCCCceEEEE---EecCCc-----------ccHHHHHHHHHH-hcceeeeeCCC
Confidence 1344432333556666999999999962 343332 124788888876 49888754333
Q ss_pred ccCCCCcccccccccceEEEEEEEc
Q 015160 378 TTYTTNPRSMMQNRYFTAFWTMRKK 402 (412)
Q Consensus 378 s~Y~~d~~sm~~~~Y~~~f~VarK~ 402 (412)
+.=. + .-.|+||+.-
T Consensus 283 ASR~-S---------tEvf~La~gf 297 (320)
T 2hwk_A 283 SSLE-E---------TEVLFVFIGY 297 (320)
T ss_dssp TCCS-T---------TCEEEEEEEE
T ss_pred Cccc-c---------ceEEEEEEee
Confidence 2222 1 4578888873
No 404
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=80.64 E-value=0.88 Score=45.79 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=27.6
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-cCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-LGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~Gf~V~GnD~S~~ML~ 225 (412)
++.+|+++|+|. |+.+..+++ .|..|++.|.+..-+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~ 209 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKE 209 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence 467999999874 555555544 5999999999986553
No 405
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=80.60 E-value=2.5 Score=42.32 Aligned_cols=52 Identities=12% Similarity=-0.065 Sum_probs=40.2
Q ss_pred HHHHHHhhCCCCCCCCCCeEEEecCCCChhHHHHHHc-C--CeEEEEeCCHHHHHHHH
Q 015160 174 ILEELDALFPNRSKESPPACLVPGAGLGRLALEISHL-G--FISQGNEFSYYMMICSS 228 (412)
Q Consensus 174 Il~~L~~~~p~~~~~~~~rVLvPGCGlGRLa~eLA~~-G--f~V~GnD~S~~ML~~s~ 228 (412)
+++++-+.+.. +++..++|-.||.|..+..|+++ | -.|.|+|.++.+|..++
T Consensus 45 Ll~Evl~~L~i---~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 45 LLDEAVNGLNI---RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTHHHHHHTCC---CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred cHHHHHHhhCC---CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 34444444432 26679999999999999999887 3 47999999999998775
No 406
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=79.89 E-value=12 Score=34.24 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=27.8
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|.+++-+..-+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~ 49 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKG 49 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998644 35777888899999999988654
No 407
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=79.87 E-value=2.4 Score=41.69 Aligned_cols=36 Identities=11% Similarity=0.020 Sum_probs=24.1
Q ss_pred CccEEEEecccCC-hhhHHHHHHHHHHhccCCcEEEEec
Q 015160 297 AWDAVVTCFFIDT-AHNIVEYIEIISRILKDGGVWINLG 334 (412)
Q Consensus 297 ~fD~VvT~FFIDt-a~Ni~~yl~~I~~~LKPGG~wIN~G 334 (412)
.-|+|+.+.-+.. ..+++. +.+...||||+++||.|
T Consensus 219 ~aDvV~l~~P~t~~t~~li~--~~~l~~mk~gailIN~a 255 (335)
T 2g76_A 219 LCDFITVHTPLLPSTTGLLN--DNTFAQCKKGVRVVNCA 255 (335)
T ss_dssp GCSEEEECCCCCTTTTTSBC--HHHHTTSCTTEEEEECS
T ss_pred cCCEEEEecCCCHHHHHhhC--HHHHhhCCCCcEEEECC
Confidence 4688887765543 222221 45678899999999964
No 408
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=79.80 E-value=7.9 Score=38.09 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=60.5
Q ss_pred CCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
..+|.++|+|. +.+|..|++.|++|+..+.+..-+...+ .. ... ...+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~----~~---~~~--------------------~~~l~g~ 81 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQ----AE---GVN--------------------NRYLPNY 81 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHH----HH---SSB--------------------TTTBTTC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----Hc---CCC--------------------cccCCCC
Confidence 45899999996 4578889999999999999976543211 10 000 0012222
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEE
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWIN 332 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN 332 (412)
. .+.++... .|..+.- ...|+|+.+- ....+.+.++.|...|+||-++|+
T Consensus 82 ~-----l~~~i~~t-~d~~ea~------~~aDvVilaV---p~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 82 P-----FPETLKAY-CDLKASL------EGVTDILIVV---PSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp C-----CCTTEEEE-SCHHHHH------TTCCEEEECC---CHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred c-----cCCCeEEE-CCHHHHH------hcCCEEEECC---CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 11123332 2333321 3468887543 233577888888889999888885
No 409
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=79.77 E-value=6.1 Score=36.30 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=25.9
Q ss_pred CCCeEEEecCCC--Ch-hHHHHHHcCCeEEEEeCC
Q 015160 189 SPPACLVPGAGL--GR-LALEISHLGFISQGNEFS 220 (412)
Q Consensus 189 ~~~rVLvPGCGl--GR-La~eLA~~Gf~V~GnD~S 220 (412)
.+.+||+-|++. |+ ++..|+++|+.|..+|.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEccc
Confidence 456899999854 44 578889999999999887
No 410
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.48 E-value=3.5 Score=39.07 Aligned_cols=34 Identities=15% Similarity=-0.026 Sum_probs=27.5
Q ss_pred CeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 191 PACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 191 ~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+|.++|+|. | .++..|++.|+.|++.|.+..-+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~ 51 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAM 51 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 5799999885 3 36778888999999999987543
No 411
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=79.33 E-value=1.7 Score=41.60 Aligned_cols=40 Identities=20% Similarity=0.240 Sum_probs=29.5
Q ss_pred CCCeEEEecCCC-ChhHHHHHHc-CCe-EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISHL-GFI-SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~~-Gf~-V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+. |+. +.++|.|..=+..++
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~ 202 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAK 202 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHH
Confidence 678999999874 6667777665 775 579999987665443
No 412
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=79.15 E-value=2.4 Score=36.77 Aligned_cols=35 Identities=29% Similarity=0.246 Sum_probs=26.3
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHc-CCeEEEEeCCHHHH
Q 015160 190 PPACLVPGAGL-GR-LALEISHL-GFISQGNEFSYYMM 224 (412)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~-Gf~V~GnD~S~~ML 224 (412)
+.+|++.|+|. |+ ++..|.+. |+.|+++|.+..-+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~ 76 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA 76 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH
Confidence 56899998763 32 24556677 99999999998765
No 413
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=79.09 E-value=3.9 Score=38.98 Aligned_cols=40 Identities=18% Similarity=0.177 Sum_probs=30.0
Q ss_pred CCCeEEEecCCC-ChhHHHHHH-c-CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGL-GRLALEISH-L-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eLA~-~-Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.|+|. |.++..+|+ . |..|.++|.|..=+..++
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~ 205 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK 205 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh
Confidence 677999999986 455666665 3 789999999987654433
No 414
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=78.85 E-value=2 Score=41.73 Aligned_cols=32 Identities=13% Similarity=0.213 Sum_probs=23.7
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHH
Q 015160 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~S~~ 222 (412)
.+.+|.++|+ |+++..+| ..|+.|.+.|-+..
T Consensus 141 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (313)
T 2ekl_A 141 AGKTIGIVGF--GRIGTKVGIIANAMGMKVLAYDILDI 176 (313)
T ss_dssp TTCEEEEESC--SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence 5678999965 56655555 45999999998764
No 415
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=78.57 E-value=1.6 Score=42.16 Aligned_cols=40 Identities=18% Similarity=0.208 Sum_probs=30.9
Q ss_pred CCCeEEEec-C-CCChhHHHHHHc-CCeEEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPG-A-GLGRLALEISHL-GFISQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPG-C-GlGRLa~eLA~~-Gf~V~GnD~S~~ML~~s~ 228 (412)
++.+||+.| + |.|.++..+|+. |+.|.+++-+..-+..++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 192 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK 192 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 567999994 4 568888888764 999999999887654433
No 416
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=78.42 E-value=13 Score=34.00 Aligned_cols=29 Identities=31% Similarity=0.429 Sum_probs=20.8
Q ss_pred CCeEEEecCCCChhHHHH----HHcCCeEEEEeCC
Q 015160 190 PPACLVPGAGLGRLALEI----SHLGFISQGNEFS 220 (412)
Q Consensus 190 ~~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S 220 (412)
..+||+.|+ |.++..| +++|+.|.+++-+
T Consensus 3 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAGC--GDLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 357999994 6665554 5569999888654
No 417
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=78.18 E-value=1.7 Score=41.34 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=27.3
Q ss_pred CCCeEEEec--CCCChhHHHHHHc-CCeEEEEeCCHHHH
Q 015160 189 SPPACLVPG--AGLGRLALEISHL-GFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPG--CGlGRLa~eLA~~-Gf~V~GnD~S~~ML 224 (412)
++.+||+.| .|.|.++..+|+. |..|.+.+ +..-+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~ 189 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNH 189 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchH
Confidence 678999996 4579999998875 99999987 44334
No 418
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=77.37 E-value=5.9 Score=41.80 Aligned_cols=138 Identities=18% Similarity=0.123 Sum_probs=0.0
Q ss_pred CCCCeEEEecCCCChhHHHHHHcC--------------CeEEEEeC---CHHHHH-----------HHHhhhhccccccc
Q 015160 188 ESPPACLVPGAGLGRLALEISHLG--------------FISQGNEF---SYYMMI-----------CSSFILNHTETAGE 239 (412)
Q Consensus 188 ~~~~rVLvPGCGlGRLa~eLA~~G--------------f~V~GnD~---S~~ML~-----------~s~filn~~~~~~~ 239 (412)
++..+||+.|-|||..++...+.- -+.+++|. +...|. .+.-+++.
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~------ 138 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQ------ 138 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHH------
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHh------
Q ss_pred ccccccccccCCCCCcccCccccccCCCCCCCCCCCCceeEEecccccccCCCCC----CCCccEEEEecc---cCChhh
Q 015160 240 WNIYPWIHSNCNSLSDSDQLRPVSIPDIHPASAGITEGFSMCGGDFVEVYSDPSQ----VGAWDAVVTCFF---IDTAHN 312 (412)
Q Consensus 240 ~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p~~~~~~~~~s~~~GDF~ely~~~~~----~~~fD~VvT~FF---IDta~N 312 (412)
+|-...-++....++ ..++ +.+..||..+... .. ...||+|+-==| .....=
T Consensus 139 ---~~~~~~~~~~~~~~~--~~~~--------------l~l~~gd~~~~l~--~~~~~~~~~~d~~~~D~f~p~~np~~w 197 (676)
T 3ps9_A 139 ---WPMPLPGCHRLLLDA--GRVT--------------LDLWFGDINELTS--QLDDSLNQKVDAWFLDGFAPAKNPDMW 197 (676)
T ss_dssp ---CCCCCSEEEEEEEGG--GTEE--------------EEEEESCHHHHGG--GBCGGGTTCEEEEEECCSCGGGCGGGS
T ss_pred ---CcccCCCceEEEecC--CcEE--------------EEEecCCHHHHHH--hcccccCCcccEEEECCCCCcCChhhh
Q ss_pred HHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 313 IVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 313 i~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
-.++|..+++++||||.+.. .-....+++.+.++||.+.+
T Consensus 198 ~~~~~~~l~~~~~~g~~~~t--------------------~~~~~~vr~~L~~aGf~v~~ 237 (676)
T 3ps9_A 198 TQNLFNAMARLARPGGTLAT--------------------FTSAGFVRRGLQDAGFTMQK 237 (676)
T ss_dssp CHHHHHHHHHHEEEEEEEEE--------------------SCCCHHHHHHHHHHTCEEEE
T ss_pred hHHHHHHHHHHhCCCCEEEe--------------------ccCcHHHHHHHHhCCeEEEe
No 419
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=77.23 E-value=16 Score=33.75 Aligned_cols=34 Identities=24% Similarity=0.409 Sum_probs=26.8
Q ss_pred eEEEecCCC--ChhHHHHHHcCC--eEEEEeCCHHHHH
Q 015160 192 ACLVPGAGL--GRLALEISHLGF--ISQGNEFSYYMMI 225 (412)
Q Consensus 192 rVLvPGCGl--GRLa~eLA~~Gf--~V~GnD~S~~ML~ 225 (412)
+|.++|+|. +.++..|++.|+ .|.+.|.+..-+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~ 40 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESIS 40 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHH
Confidence 799999885 345677788899 9999999986653
No 420
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=76.71 E-value=10 Score=38.03 Aligned_cols=34 Identities=24% Similarity=0.114 Sum_probs=27.9
Q ss_pred eEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 192 ACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 192 rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
+|.++|+|. | .+|..|++.|+.|+++|.+..-+.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~ 37 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKID 37 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 688999885 2 357788999999999999987653
No 421
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=76.70 E-value=2.6 Score=42.15 Aligned_cols=50 Identities=24% Similarity=0.256 Sum_probs=37.3
Q ss_pred chHHHHHHHHhhCCCCCCCCCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015160 170 CYKPILEELDALFPNRSKESPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (412)
Q Consensus 170 ~y~pIl~~L~~~~p~~~~~~~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (412)
.|..+++.+..-++.. ....+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 15 ~~~~~~~~~~~~~~~~--~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 15 DYEEFLEIARNGLKAT--SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp THHHHHHHHHHCSCCC--SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred hHHHHHHHhccCCCCC--CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 3556666666555422 2456899999999988 678899999999998764
No 422
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=76.36 E-value=10 Score=32.43 Aligned_cols=55 Identities=16% Similarity=0.151 Sum_probs=37.9
Q ss_pred CCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCCCCcccCCCHHHHHHHHHhCCCEEEEE
Q 015160 296 GAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQEDEMSIELSLEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 296 ~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~~~~~ieLS~EEL~~ll~~~GFeii~e 373 (412)
...|+|+.+-- ++.+.+.++.+.+ +..+++||..| .+ .+++.+++++.|..++-.
T Consensus 69 ~~~Dlvii~vp---~~~v~~v~~~~~~-~g~~~i~i~~~----------------~~---~~~l~~~a~~~Gi~~igp 123 (145)
T 2duw_A 69 EKVDMVDVFRN---SEAAWGVAQEAIA-IGAKTLWLQLG----------------VI---NEQAAVLAREAGLSVVMD 123 (145)
T ss_dssp SCCSEEECCSC---STHHHHHHHHHHH-HTCCEEECCTT----------------CC---CHHHHHHHHTTTCEEECS
T ss_pred CCCCEEEEEeC---HHHHHHHHHHHHH-cCCCEEEEcCC----------------hH---HHHHHHHHHHcCCEEEcC
Confidence 35788877532 3456677777666 67788888421 11 578999999999988853
No 423
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=76.34 E-value=14 Score=38.07 Aligned_cols=34 Identities=12% Similarity=0.010 Sum_probs=30.2
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHH
Q 015160 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ 222 (412)
+-.+|-++|+|+ +.+|.-|++.|+.|+..|.+..
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 345899999997 6789999999999999999997
No 424
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=76.26 E-value=27 Score=32.73 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+.
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~ 69 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALE 69 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH
Confidence 4568999998644 357888889999999999987653
No 425
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.14 E-value=2.4 Score=35.98 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=26.3
Q ss_pred CCCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~M 223 (412)
.+.+|++.|+|. |+ ++..|.+.|+.|+++|.+..-
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~ 54 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYA 54 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 567999999864 33 345566779999999998743
No 426
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=76.11 E-value=0.59 Score=51.15 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=28.9
Q ss_pred CCCCCeEEEecC--CCChhHHHHHHc-CCeEEEEeCCH
Q 015160 187 KESPPACLVPGA--GLGRLALEISHL-GFISQGNEFSY 221 (412)
Q Consensus 187 ~~~~~rVLvPGC--GlGRLa~eLA~~-Gf~V~GnD~S~ 221 (412)
-+++.+||+.|+ |.|.++..||+. |..|.+.+-+.
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~ 380 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED 380 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH
Confidence 347889999994 789999999886 99999887544
No 427
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=76.01 E-value=1.7 Score=41.35 Aligned_cols=29 Identities=24% Similarity=0.181 Sum_probs=25.5
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeC
Q 015160 191 PACLVPGAGLGRL--ALEISHLGFISQGNEF 219 (412)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~ 219 (412)
.+|+++|+|.+.| |..|+++|++|+-+|-
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 5899999999988 6788999999998874
No 428
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=75.90 E-value=2.8 Score=41.17 Aligned_cols=37 Identities=22% Similarity=0.276 Sum_probs=26.7
Q ss_pred CCCeEEEecCC-CChhHHHH-HHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEI-SHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eL-A~~Gf~V~GnD~S~~ML~ 225 (412)
++.+||++|+| .|+.+..+ +..|..|++.|.+..-+.
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~ 204 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLS 204 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 34799999985 35544444 456999999999986553
No 429
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=75.74 E-value=2.9 Score=40.36 Aligned_cols=32 Identities=16% Similarity=0.109 Sum_probs=23.3
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeCCHH
Q 015160 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEFSYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~S~~ 222 (412)
.+.+|.++|+ |+++..+| ..|+.|.+.|-+..
T Consensus 141 ~g~~vgIiG~--G~IG~~~A~~l~~~G~~V~~~d~~~~ 176 (307)
T 1wwk_A 141 EGKTIGIIGF--GRIGYQVAKIANALGMNILLYDPYPN 176 (307)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCceEEEEcc--CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 5678999965 56655555 45999999998763
No 430
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=75.44 E-value=3.3 Score=34.14 Aligned_cols=35 Identities=20% Similarity=0.116 Sum_probs=26.9
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 190 PPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
..+|++.|+|. |+ ++..|++.|+.|.++|.+..-+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~ 42 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI 42 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence 35799999864 22 4566677899999999998765
No 431
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=75.37 E-value=11 Score=36.39 Aligned_cols=143 Identities=10% Similarity=-0.017 Sum_probs=84.2
Q ss_pred CeEEEecCCCChhHHHHH-HcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCCC
Q 015160 191 PACLVPGAGLGRLALEIS-HLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIHP 269 (412)
Q Consensus 191 ~rVLvPGCGlGRLa~eLA-~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~p 269 (412)
..||++|||+=..++.|. ..|..+.=+|+ +.++...+.+|.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD~-P~vi~~k~~lL~~~~~--------------------------------- 149 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEIDQ-PKVLAYKSTTLAEHGV--------------------------------- 149 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEEC-HHHHHHHHHHHHHTTC---------------------------------
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcCC-HHHHHHHHHHHHhcCC---------------------------------
Confidence 369999999999999998 34678888886 6676655555532100
Q ss_pred CCCCCCCceeEEecccccccCC-CCCCCCcc----EEEEe----cccCChhhHHHHHHHHHHhccCCcEEEE--ecCcc-
Q 015160 270 ASAGITEGFSMCGGDFVEVYSD-PSQVGAWD----AVVTC----FFIDTAHNIVEYIEIISRILKDGGVWIN--LGPLL- 337 (412)
Q Consensus 270 ~~~~~~~~~s~~~GDF~ely~~-~~~~~~fD----~VvT~----FFIDta~Ni~~yl~~I~~~LKPGG~wIN--~GPLl- 337 (412)
....+..++.+|+++ .-. .-....|| +++.+ .|+... .+...|+.+...+.||+.++- +.|-.
T Consensus 150 ---~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~-~~~~ll~~l~~~~~~gs~l~~d~~~~~~~ 224 (310)
T 2uyo_A 150 ---TPTADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPAT-AQDGLFTEIGGLSAVGSRIAVETSPLHGD 224 (310)
T ss_dssp ---CCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHH-HHHHHHHHHHHTCCTTCEEEEECCCTTCS
T ss_pred ---CCCCCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHH-HHHHHHHHHHHhCCCCeEEEEEecCCCCc
Confidence 011236677788775 100 00011122 22221 477764 688999999999999987763 22211
Q ss_pred -----------hhhhhccCC---CCCcccCC--C-HHHHHHHHHhCCCEEEEE
Q 015160 338 -----------YHFADLYGQ---EDEMSIEL--S-LEDVKRVALHYGFEFEKE 373 (412)
Q Consensus 338 -----------yh~~~~~g~---~~~~~ieL--S-~EEL~~ll~~~GFeii~e 373 (412)
-++.. .|. -+-.++.. + .+++.+.+.+.||+.+..
T Consensus 225 ~~~~~~~~~~~~~~~~-~g~~~~~~l~~~~~~~~~~~~~~~~f~~~G~~~~~~ 276 (310)
T 2uyo_A 225 EWREQMQLRFRRVSDA-LGFEQAVDVQELIYHDENRAVVADWLNRHGWRATAQ 276 (310)
T ss_dssp HHHHHHHHHHHHHHC------------CCTTCCTTCCCHHHHHTTTTEEEEEE
T ss_pred chhHHHHHHHHHHHHH-cCCcCCCCccccccCCCChHHHHHHHHHCcCccccC
Confidence 11111 110 01012333 6 899999999999998843
No 432
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=75.31 E-value=8.3 Score=34.18 Aligned_cols=32 Identities=22% Similarity=0.162 Sum_probs=23.0
Q ss_pred CCeEEEecC--CCChh-HHHHHHcCC--eEEEEeCCH
Q 015160 190 PPACLVPGA--GLGRL-ALEISHLGF--ISQGNEFSY 221 (412)
Q Consensus 190 ~~rVLvPGC--GlGRL-a~eLA~~Gf--~V~GnD~S~ 221 (412)
+.+||+.|+ |+|+. +..|+++|+ .|.+++-+.
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 458999996 34443 556778899 999887654
No 433
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=74.62 E-value=2.8 Score=41.91 Aligned_cols=31 Identities=10% Similarity=-0.029 Sum_probs=22.5
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCH
Q 015160 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSY 221 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~S~ 221 (412)
.+.+|.++|. |+++..+|+ .|+.|.+.|-+.
T Consensus 175 ~gktvGIIGl--G~IG~~vA~~l~~fG~~V~~~d~~~ 209 (365)
T 4hy3_A 175 AGSEIGIVGF--GDLGKALRRVLSGFRARIRVFDPWL 209 (365)
T ss_dssp SSSEEEEECC--SHHHHHHHHHHTTSCCEEEEECSSS
T ss_pred CCCEEEEecC--CcccHHHHHhhhhCCCEEEEECCCC
Confidence 4678999975 456655555 488999998764
No 434
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=74.50 E-value=34 Score=30.91 Aligned_cols=36 Identities=19% Similarity=0.136 Sum_probs=29.4
Q ss_pred CCCeEEEecC-C--CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGA-G--LGR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGC-G--lGR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|+ | .|+ ++..|+++|+.|..++.+..-+
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~ 60 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL 60 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHH
Confidence 4678999987 4 565 5888999999999999987654
No 435
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=74.31 E-value=5 Score=41.79 Aligned_cols=33 Identities=15% Similarity=0.134 Sum_probs=24.8
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~~M 223 (412)
.+.+|.++| +|+.+..+|++ |..|++.|.+..-
T Consensus 276 ~GktVgIIG--~G~IG~~vA~~l~~~G~~V~v~d~~~~~ 312 (494)
T 3d64_A 276 AGKIAVVAG--YGDVGKGCAQSLRGLGATVWVTEIDPIC 312 (494)
T ss_dssp TTCEEEEEC--CSHHHHHHHHHHHTTTCEEEEECSCHHH
T ss_pred CCCEEEEEc--cCHHHHHHHHHHHHCCCEEEEEeCChHh
Confidence 567899987 55666555544 8999999999754
No 436
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=74.16 E-value=43 Score=29.78 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+.
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~ 43 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAE 43 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3568999997544 357888889999999999886653
No 437
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=73.93 E-value=5.1 Score=41.60 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCChhHHHHHH----cCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGLGRLALEISH----LGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~----~Gf~V~GnD~S~~M 223 (412)
.+.+|+++|. |+.+..+|+ .|++|.+.|.+..-
T Consensus 256 ~GktVgIIG~--G~IG~~vA~~l~~~G~~Viv~d~~~~~ 292 (479)
T 1v8b_A 256 SGKIVVICGY--GDVGKGCASSMKGLGARVYITEIDPIC 292 (479)
T ss_dssp TTSEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred CCCEEEEEee--CHHHHHHHHHHHhCcCEEEEEeCChhh
Confidence 5678999874 555555544 49999999999854
No 438
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=73.79 E-value=2.5 Score=43.55 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=25.4
Q ss_pred CCCeEEEecCCC-ChhHH-HHHHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGL-GRLAL-EISHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~-eLA~~Gf~V~GnD~S~~M 223 (412)
.+.+|++.|+|. |+.+. .+...|..|.+.|.++.-
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~r 255 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPIC 255 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 567999999985 44433 333459999999999853
No 439
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=73.47 E-value=11 Score=39.11 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=26.6
Q ss_pred CCCeEEEecCC-CCh-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAG-LGR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCG-lGR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+|++.|+| .|+ .|..|+..|..|..+|.+..-+
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a 301 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICA 301 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 56799999987 222 3555566799999999997554
No 440
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=73.30 E-value=41 Score=30.40 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=28.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 45 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERA 45 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997544 35778888999999999987654
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=72.65 E-value=16 Score=34.39 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=24.5
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S~~M 223 (412)
.+.+|+++|+| +.+..+ ...|++|.+.|-+..-
T Consensus 154 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~ 190 (293)
T 3d4o_A 154 HGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDL 190 (293)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 56799999975 444444 4459999999998754
No 442
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=72.19 E-value=3.1 Score=40.74 Aligned_cols=31 Identities=19% Similarity=0.170 Sum_probs=23.2
Q ss_pred CCCeEEEecCCCChhHHHHHHc----CCeEEEEeCCH
Q 015160 189 SPPACLVPGAGLGRLALEISHL----GFISQGNEFSY 221 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~----Gf~V~GnD~S~ 221 (412)
.+.+|.++|. |+++..+|++ |+.|.+.|-+.
T Consensus 144 ~g~tvGIIG~--G~IG~~vA~~l~~~G~~V~~~d~~~ 178 (330)
T 4e5n_A 144 DNATVGFLGM--GAIGLAMADRLQGWGATLQYHEAKA 178 (330)
T ss_dssp TTCEEEEECC--SHHHHHHHHHTTTSCCEEEEECSSC
T ss_pred CCCEEEEEee--CHHHHHHHHHHHHCCCEEEEECCCC
Confidence 5678999975 5666665554 88999999875
No 443
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=72.14 E-value=22 Score=33.88 Aligned_cols=112 Identities=11% Similarity=0.058 Sum_probs=62.2
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCCC
Q 015160 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDIH 268 (412)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv~ 268 (412)
.||=.+|.|. ..+|..|++.||.|++.|.+..-.. . + . . .+
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~----------~---l-----~-------~-----~G------- 48 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAE----------P---L-----T-------K-----LG------- 48 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------C----------T---T-----T-------T-----TT-------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHH----------H---H-----H-------H-----cC-------
Confidence 3788887775 3446777888999999998874420 0 0 0 0 00
Q ss_pred CCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHH-HHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 269 PASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVE-YIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 269 p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~-yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
.. .+.+..++- ..-|+|++|.- +...+.+ +...+...|++|+++|..+-..+
T Consensus 49 ---------~~-~~~s~~e~~------~~~dvvi~~l~--~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p--------- 101 (297)
T 4gbj_A 49 ---------AT-VVENAIDAI------TPGGIVFSVLA--DDAAVEELFSMELVEKLGKDGVHVSMSTISP--------- 101 (297)
T ss_dssp ---------CE-ECSSGGGGC------CTTCEEEECCS--SHHHHHHHSCHHHHHHHCTTCEEEECSCCCH---------
T ss_pred ---------Ce-EeCCHHHHH------hcCCceeeecc--chhhHHHHHHHHHHhhcCCCeEEEECCCCCh---------
Confidence 11 122333332 34588887643 3333333 34668889999999997433211
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
-+..++.+.+.+.|...+.
T Consensus 102 ------~~~~~~~~~~~~~g~~~ld 120 (297)
T 4gbj_A 102 ------ETSRQLAQVHEWYGAHYVG 120 (297)
T ss_dssp ------HHHHHHHHHHHHTTCEEEE
T ss_pred ------HHHHHHHHHHHhcCCceec
Confidence 1345666777788888776
No 444
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=71.97 E-value=2.3 Score=41.24 Aligned_cols=30 Identities=37% Similarity=0.337 Sum_probs=27.1
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015160 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (412)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (412)
+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 699999999998 789999999999999764
No 445
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=71.83 E-value=16 Score=34.51 Aligned_cols=33 Identities=24% Similarity=0.183 Sum_probs=24.6
Q ss_pred CCCeEEEecCCCChhHHHH----HHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGLGRLALEI----SHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eL----A~~Gf~V~GnD~S~~M 223 (412)
.+.+|+++|+| +.+..+ ...|+.|++.|-+..-
T Consensus 156 ~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~d~~~~~ 192 (300)
T 2rir_A 156 HGSQVAVLGLG--RTGMTIARTFAALGANVKVGARSSAH 192 (300)
T ss_dssp TTSEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred CCCEEEEEccc--HHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 56799999975 444444 4559999999998754
No 446
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=71.72 E-value=49 Score=30.46 Aligned_cols=36 Identities=19% Similarity=0.269 Sum_probs=27.4
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 61 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNV 61 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 3568999997544 35778888999999999987655
No 447
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=71.72 E-value=1.1 Score=43.34 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=27.3
Q ss_pred CCCCeEEEecC--CCChhHHHHHHc--CCeEEEEeCCHHH
Q 015160 188 ESPPACLVPGA--GLGRLALEISHL--GFISQGNEFSYYM 223 (412)
Q Consensus 188 ~~~~rVLvPGC--GlGRLa~eLA~~--Gf~V~GnD~S~~M 223 (412)
+++.+||+.|+ |.|.++..+|+. |..|.+.+ |..-
T Consensus 141 ~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~ 179 (349)
T 4a27_A 141 REGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFK 179 (349)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHH
Confidence 36789999998 579999999985 46888887 4433
No 448
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=71.64 E-value=8.8 Score=39.19 Aligned_cols=36 Identities=11% Similarity=-0.021 Sum_probs=29.5
Q ss_pred CCCeEEEecCCCC--hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG--RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG--RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
...||-++|.|.= -+|..||+.|+.|++.|.+..-+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv 44 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKI 44 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4578999999852 34788999999999999998765
No 449
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=71.10 E-value=12 Score=34.27 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=25.6
Q ss_pred eEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 192 ACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 192 rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
+|.++|+|. |+ ++..|++ |++|++.|.+..-+
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~ 36 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKA 36 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHH
Confidence 689999985 44 5777888 99999999987654
No 450
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=70.91 E-value=3.4 Score=39.67 Aligned_cols=38 Identities=24% Similarity=0.273 Sum_probs=32.0
Q ss_pred CCCeEEEecC--CCChhHHHHHH-cCCeEEEEeCCHHHHHH
Q 015160 189 SPPACLVPGA--GLGRLALEISH-LGFISQGNEFSYYMMIC 226 (412)
Q Consensus 189 ~~~rVLvPGC--GlGRLa~eLA~-~Gf~V~GnD~S~~ML~~ 226 (412)
++.+||+.|+ |.|+.+..+++ +|+.|.+++.|...+..
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~ 209 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEEL 209 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHH
Confidence 6679999998 68999888876 69999999998877643
No 451
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=70.85 E-value=14 Score=37.49 Aligned_cols=35 Identities=17% Similarity=-0.011 Sum_probs=28.2
Q ss_pred CeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 191 PACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 191 ~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
.+|.++|+|. +.+|..|++.|+.|++.|.+..-+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~ 39 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIE 39 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHH
Confidence 4799999875 3457788899999999999987653
No 452
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=70.66 E-value=61 Score=29.42 Aligned_cols=36 Identities=14% Similarity=0.077 Sum_probs=29.2
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| + ++..|+++|+.|..++.+..-+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 48 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERL 48 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHH
Confidence 4568999998554 3 5888899999999999988765
No 453
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=70.53 E-value=5.1 Score=33.38 Aligned_cols=36 Identities=19% Similarity=0.006 Sum_probs=27.8
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCeEEEEeCCHHHHH
Q 015160 190 PPACLVPGAGL-GR-LALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
..+|++.|+|. |+ ++..|.+.|+.|+++|.+..-+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~ 44 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVD 44 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHH
Confidence 46899999874 33 35666777999999999997653
No 454
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=70.40 E-value=2.7 Score=41.06 Aligned_cols=29 Identities=34% Similarity=0.297 Sum_probs=26.4
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
+|+++|+|.+.| |+.|+++|++|+-+|-+
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~ 32 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKS 32 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 699999999998 68899999999999975
No 455
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=70.24 E-value=9.7 Score=35.47 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=27.8
Q ss_pred CeEEEecC-CC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 191 PACLVPGA-GL-G-RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 191 ~rVLvPGC-Gl-G-RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+|.++|+ |. | .++..|++.|+.|++.|.+..-+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~ 48 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR 48 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence 48999999 84 3 45778889999999999997654
No 456
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=70.21 E-value=12 Score=34.89 Aligned_cols=40 Identities=15% Similarity=-0.001 Sum_probs=24.6
Q ss_pred hhCCCCCCCCCCeEEEecCCCC--hhHHHHHHcCCeEEEEeC
Q 015160 180 ALFPNRSKESPPACLVPGAGLG--RLALEISHLGFISQGNEF 219 (412)
Q Consensus 180 ~~~p~~~~~~~~rVLvPGCGlG--RLa~eLA~~Gf~V~GnD~ 219 (412)
.+||-.-.-.+.+||++|+|.= |-+..|.+.|..|+-++-
T Consensus 21 ~~~Pifl~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 21 HMYTVMLDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp -CCEEEECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CccccEEEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 4455221226779999998842 223456677998887754
No 457
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=70.17 E-value=47 Score=30.75 Aligned_cols=36 Identities=19% Similarity=0.231 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~ 66 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA 66 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998654 36888899999999999987654
No 458
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=69.98 E-value=37 Score=31.39 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=28.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 69 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL 69 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGG
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998644 35778888999999999887554
No 459
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=69.56 E-value=3.1 Score=40.40 Aligned_cols=33 Identities=27% Similarity=0.336 Sum_probs=28.0
Q ss_pred CCCeEEEecCCCChh--HHHHHHcCCeEEEEeCCH
Q 015160 189 SPPACLVPGAGLGRL--ALEISHLGFISQGNEFSY 221 (412)
Q Consensus 189 ~~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S~ 221 (412)
+..+|+++|+|.+.| |+.|+++|++|+-+|-+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 457899999999987 678899999999998654
No 460
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=69.53 E-value=17 Score=34.71 Aligned_cols=31 Identities=10% Similarity=0.067 Sum_probs=25.6
Q ss_pred CeEEEecCCC-C-hhHHHHHHcC-CeEEEEeCCH
Q 015160 191 PACLVPGAGL-G-RLALEISHLG-FISQGNEFSY 221 (412)
Q Consensus 191 ~rVLvPGCGl-G-RLa~eLA~~G-f~V~GnD~S~ 221 (412)
.+|.++|+|. | .++..|++.| +.|++.|.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4799999884 3 3577788899 9999999986
No 461
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=69.46 E-value=2.5 Score=39.79 Aligned_cols=29 Identities=28% Similarity=0.218 Sum_probs=25.6
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
-|+++|+|...+ |..||++|++|+-+|-.
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~ 36 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKR 36 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCC
Confidence 499999999887 78899999999999853
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=69.21 E-value=31 Score=31.68 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=27.6
Q ss_pred CeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 191 PACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 191 ~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+|+++|+|. | .++..|++.|++|+..|.+..-+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~ 39 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHI 39 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHH
Confidence 4899999984 3 44777888999999999988654
No 463
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=69.13 E-value=4.5 Score=39.27 Aligned_cols=32 Identities=6% Similarity=-0.032 Sum_probs=22.9
Q ss_pred CCCeEEEecCCCChhHHHHH----HcCCeEEEEeC-CHH
Q 015160 189 SPPACLVPGAGLGRLALEIS----HLGFISQGNEF-SYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA----~~Gf~V~GnD~-S~~ 222 (412)
.+.+|.++|+ |+++..+| ..|+.|.+.|- +..
T Consensus 145 ~g~~vgIIG~--G~IG~~~A~~l~~~G~~V~~~d~~~~~ 181 (320)
T 1gdh_A 145 DNKTLGIYGF--GSIGQALAKRAQGFDMDIDYFDTHRAS 181 (320)
T ss_dssp TTCEEEEECC--SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred CCCEEEEECc--CHHHHHHHHHHHHCCCEEEEECCCCcC
Confidence 5678999965 55555554 45899999998 653
No 464
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=69.10 E-value=37 Score=30.59 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=24.5
Q ss_pred CCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 015160 190 PPACLVPGAGLG---RLALEISHLGFISQGNEFSY 221 (412)
Q Consensus 190 ~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~ 221 (412)
..+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~ 41 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSD 41 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 457999997544 35788889999999886653
No 465
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=68.92 E-value=55 Score=29.49 Aligned_cols=36 Identities=25% Similarity=0.174 Sum_probs=28.7
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|...+.+..-+
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~ 46 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA 46 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998654 35788889999999999987654
No 466
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=68.91 E-value=53 Score=30.21 Aligned_cols=33 Identities=21% Similarity=0.183 Sum_probs=26.1
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSY 221 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~ 221 (412)
.+.+||+-|++.| .++..|+++|+.|..++-+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 65 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD 65 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH
Confidence 4678999998654 36888889999999998654
No 467
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=68.67 E-value=21 Score=32.54 Aligned_cols=35 Identities=23% Similarity=0.149 Sum_probs=27.1
Q ss_pred CCeEEEecCCC-Ch-hHHHHHHcCCe-EEEEeCCHHHH
Q 015160 190 PPACLVPGAGL-GR-LALEISHLGFI-SQGNEFSYYMM 224 (412)
Q Consensus 190 ~~rVLvPGCGl-GR-La~eLA~~Gf~-V~GnD~S~~ML 224 (412)
..+|.++|+|. |+ ++..|++.|+. |...|.+..-+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~ 47 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESA 47 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHH
Confidence 35899999973 33 46777888998 89999998654
No 468
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=68.22 E-value=51 Score=30.03 Aligned_cols=32 Identities=25% Similarity=0.297 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 220 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S 220 (412)
.+.+||+-|++.| .++..|+++|+.|..++-+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~ 62 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRS 62 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4568999998654 3577888899999998884
No 469
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=67.95 E-value=5.8 Score=38.04 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=32.4
Q ss_pred CCCeEEEecCC--CChhHHHHHHc--CCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAG--LGRLALEISHL--GFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCG--lGRLa~eLA~~--Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+| .|.++..+++. |+.|.++|.|...+..+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~ 212 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA 212 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH
Confidence 66799999987 88888888764 99999999998876544
No 470
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=67.86 E-value=71 Score=37.25 Aligned_cols=40 Identities=15% Similarity=-0.059 Sum_probs=33.8
Q ss_pred CCCeEEEecCCCChhHHHHHHcCC-e-EEEEeCCHHHHHHHH
Q 015160 189 SPPACLVPGAGLGRLALEISHLGF-I-SQGNEFSYYMMICSS 228 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa~eLA~~Gf-~-V~GnD~S~~ML~~s~ 228 (412)
...+||++=||.|.+..-|.+.|+ . |.++|+......+.+
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~ 891 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFR 891 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHH
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHH
Confidence 467899999999999999999998 4 679999998775433
No 471
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=67.50 E-value=35 Score=33.30 Aligned_cols=33 Identities=15% Similarity=-0.035 Sum_probs=24.0
Q ss_pred CCCeEEEecCCCChhH----HHHHHcCCeEEEEeCCHH
Q 015160 189 SPPACLVPGAGLGRLA----LEISHLGFISQGNEFSYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGlGRLa----~eLA~~Gf~V~GnD~S~~ 222 (412)
+..+||+.|+ +|.++ ..|++.|+.|.+++-+..
T Consensus 68 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 68 PLGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 4568999996 35444 445566999999988765
No 472
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=67.43 E-value=52 Score=29.80 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=27.9
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++-+..-+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~ 66 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL 66 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 4568999997543 34677788899999999988665
No 473
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=67.38 E-value=3.9 Score=40.49 Aligned_cols=33 Identities=15% Similarity=-0.099 Sum_probs=23.1
Q ss_pred CCCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCH
Q 015160 189 SPPACLVPGAGL-G-RLALEISHLGFISQGNEFSY 221 (412)
Q Consensus 189 ~~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~ 221 (412)
.+.+|.++|.|. | .+|..+...|+.|.+.|-+.
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~ 193 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGREN 193 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHH
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCC
Confidence 567899998763 2 23444445699999999875
No 474
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=66.98 E-value=7.8 Score=40.18 Aligned_cols=35 Identities=17% Similarity=0.106 Sum_probs=24.9
Q ss_pred CCCeEEEecCCC-ChhHHHH-HHcCCeEEEEeCCHHH
Q 015160 189 SPPACLVPGAGL-GRLALEI-SHLGFISQGNEFSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGl-GRLa~eL-A~~Gf~V~GnD~S~~M 223 (412)
.+.+|++.|+|. |+.+... ...|.+|.+.|.++.-
T Consensus 246 ~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~ 282 (464)
T 3n58_A 246 AGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPIC 282 (464)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHH
T ss_pred cCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcch
Confidence 577999999874 4443333 3358999999998854
No 475
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=66.76 E-value=63 Score=29.72 Aligned_cols=35 Identities=20% Similarity=0.115 Sum_probs=27.9
Q ss_pred CCeEEEecCCC--Ch-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 190 PPACLVPGAGL--GR-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 190 ~~rVLvPGCGl--GR-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
+.+||+-|++. |+ ++..|++.|+.|..++.+..-+
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 41 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARI 41 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 45899999854 43 5778889999999999998765
No 476
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=66.76 E-value=68 Score=29.19 Aligned_cols=37 Identities=16% Similarity=0.053 Sum_probs=28.9
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
.+.+||+-|++.| + ++..|+++|+.|..++.+..-+.
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 58 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999998544 3 57788889999999999876653
No 477
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=66.57 E-value=3.4 Score=38.70 Aligned_cols=30 Identities=30% Similarity=0.315 Sum_probs=26.9
Q ss_pred CeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 191 PACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 191 ~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
..|+++|+|.+.+ |+.|+++|++|+-+|-.
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 4799999999887 78999999999999876
No 478
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=65.99 E-value=70 Score=29.22 Aligned_cols=32 Identities=19% Similarity=0.256 Sum_probs=25.4
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCC
Q 015160 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFS 220 (412)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S 220 (412)
.+.+||+-|++.| + ++..|+++|+.|..+|.+
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~ 48 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDIC 48 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecc
Confidence 4568999998654 3 578888999999999873
No 479
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=65.88 E-value=68 Score=28.70 Aligned_cols=36 Identities=19% Similarity=0.106 Sum_probs=29.2
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++-+..-+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~ 46 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGA 46 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4568999998654 36888899999999999988665
No 480
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=65.76 E-value=76 Score=28.67 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=28.6
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| + ++..|+++|+.|..++.+..-+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~ 49 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA 49 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997654 3 5778888999999999988655
No 481
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.10 E-value=10 Score=33.25 Aligned_cols=31 Identities=23% Similarity=0.112 Sum_probs=23.3
Q ss_pred CeEEEecC--CCCh-hHHHHHHcCCeEEEEeCCH
Q 015160 191 PACLVPGA--GLGR-LALEISHLGFISQGNEFSY 221 (412)
Q Consensus 191 ~rVLvPGC--GlGR-La~eLA~~Gf~V~GnD~S~ 221 (412)
.+||+.|+ ++|+ ++..|+++|+.|.+++-+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 58999995 3444 4566778899999998775
No 482
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=65.01 E-value=88 Score=29.02 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=27.9
Q ss_pred CeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 191 PACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 191 ~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
++||+=|++.| .++..||+.|++|..+|.+..-+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~ 39 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS 39 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 47899887665 35888899999999999998665
No 483
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=65.01 E-value=11 Score=33.18 Aligned_cols=31 Identities=10% Similarity=-0.046 Sum_probs=23.6
Q ss_pred eEEEecC--CCCh-hHHHHH-HcCCeEEEEeCCHH
Q 015160 192 ACLVPGA--GLGR-LALEIS-HLGFISQGNEFSYY 222 (412)
Q Consensus 192 rVLvPGC--GlGR-La~eLA-~~Gf~V~GnD~S~~ 222 (412)
+||+.|+ |+|+ ++..|+ +.|+.|.+++-+..
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~ 41 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK 41 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH
T ss_pred EEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc
Confidence 5999995 3444 356677 78999999998865
No 484
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=64.77 E-value=3.3 Score=41.17 Aligned_cols=32 Identities=25% Similarity=0.156 Sum_probs=26.8
Q ss_pred CCeEEEecCCCChh--HHHHHHc-CCeEEEEeCCH
Q 015160 190 PPACLVPGAGLGRL--ALEISHL-GFISQGNEFSY 221 (412)
Q Consensus 190 ~~rVLvPGCGlGRL--a~eLA~~-Gf~V~GnD~S~ 221 (412)
...|+++|+|.+.| |++|+++ |++|+-+|-+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 35699999999999 5788885 99999988664
No 485
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=64.42 E-value=20 Score=36.90 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCCC
Q 015160 190 PPACLVPGAGL-G-RLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPDI 267 (412)
Q Consensus 190 ~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPDv 267 (412)
..+|-++|+|. | .++.-|++.||.|++.|.+..-+.... .. . +| . .++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~---~~---~-----~~-----------~---~gi~---- 60 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFL---AN---E-----AK-----------G---KSII---- 60 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHH---HT---T-----TT-----------T---SSEE----
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---cc---c-----cc-----------C---CCeE----
Confidence 35799999884 4 368888999999999999987653211 00 0 00 0 0010
Q ss_pred CCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCCC
Q 015160 268 HPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQE 347 (412)
Q Consensus 268 ~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~~ 347 (412)
...|..++-. .-..-|+|+.+-- +...+.+.++.+...|+||-++|+.+...+
T Consensus 61 -------------~~~s~~e~v~---~l~~aDvVil~Vp--~~~~v~~vl~~l~~~l~~g~iIId~s~~~~--------- 113 (497)
T 2p4q_A 61 -------------GATSIEDFIS---KLKRPRKVMLLVK--AGAPVDALINQIVPLLEKGDIIIDGGNSHF--------- 113 (497)
T ss_dssp -------------CCSSHHHHHH---TSCSSCEEEECCC--SSHHHHHHHHHHGGGCCTTCEEEECSCCCH---------
T ss_pred -------------EeCCHHHHHh---cCCCCCEEEEEcC--ChHHHHHHHHHHHHhCCCCCEEEECCCCCh---------
Confidence 0112222211 0123588876532 223467788899999999999998543221
Q ss_pred CCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 348 DEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 348 ~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
.+.+++.+.+...|+.++.
T Consensus 114 ------~~~~~l~~~l~~~g~~~v~ 132 (497)
T 2p4q_A 114 ------PDSNRRYEELKKKGILFVG 132 (497)
T ss_dssp ------HHHHHHHHHHHHTTCEEEE
T ss_pred ------hHHHHHHHHHHHcCCceeC
Confidence 1234455566666776653
No 486
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=64.24 E-value=46 Score=30.60 Aligned_cols=36 Identities=22% Similarity=0.152 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCC--h-hHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG--R-LALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG--R-La~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| + ++..|+++|+.|..++.+..-+
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~ 63 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRV 63 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997543 3 5778889999999999987655
No 487
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=64.19 E-value=6.3 Score=38.37 Aligned_cols=34 Identities=12% Similarity=-0.036 Sum_probs=23.6
Q ss_pred CCCeEEEecCCC-C-hhHHHHHHcCCeEEEEeCCHH
Q 015160 189 SPPACLVPGAGL-G-RLALEISHLGFISQGNEFSYY 222 (412)
Q Consensus 189 ~~~rVLvPGCGl-G-RLa~eLA~~Gf~V~GnD~S~~ 222 (412)
.+.+|.++|+|. | .+|..|+..|+.|.+.|.+..
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 567899998653 1 224444556999999998764
No 488
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=63.78 E-value=3.6 Score=41.25 Aligned_cols=31 Identities=16% Similarity=0.014 Sum_probs=26.9
Q ss_pred CCeEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 190 PPACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 190 ~~rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
...|+++|+|.|.| |..|++.|++|+-+|-.
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~ 43 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQ 43 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 35799999999988 67889999999999865
No 489
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=63.69 E-value=86 Score=28.40 Aligned_cols=36 Identities=17% Similarity=0.071 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 47 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADI 47 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997544 35777888899999999998665
No 490
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=63.54 E-value=5.7 Score=38.40 Aligned_cols=39 Identities=18% Similarity=0.067 Sum_probs=31.6
Q ss_pred CCCeEEEecCC-CChhHHHHHH-cCCeEEEEeCCHHHHHHH
Q 015160 189 SPPACLVPGAG-LGRLALEISH-LGFISQGNEFSYYMMICS 227 (412)
Q Consensus 189 ~~~rVLvPGCG-lGRLa~eLA~-~Gf~V~GnD~S~~ML~~s 227 (412)
++.+||+.|+| .|.++..+|+ +|+.|.+++.|..-+..+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~ 219 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDA 219 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 67799999986 4888888887 599999999988766443
No 491
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=63.52 E-value=5.3 Score=35.80 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=23.3
Q ss_pred CCeEEEecC--CCCh-hHHHHHHcC-CeEEEEeCCH
Q 015160 190 PPACLVPGA--GLGR-LALEISHLG-FISQGNEFSY 221 (412)
Q Consensus 190 ~~rVLvPGC--GlGR-La~eLA~~G-f~V~GnD~S~ 221 (412)
..+||+.|+ |+|+ ++..|+++| +.|.+.+-+.
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 357999995 4554 366677789 8999887765
No 492
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=63.46 E-value=3.9 Score=39.73 Aligned_cols=29 Identities=24% Similarity=0.242 Sum_probs=25.8
Q ss_pred eEEEecCCCChh--HHHHHHcCCeEEEEeCC
Q 015160 192 ACLVPGAGLGRL--ALEISHLGFISQGNEFS 220 (412)
Q Consensus 192 rVLvPGCGlGRL--a~eLA~~Gf~V~GnD~S 220 (412)
.|+++|+|.+.+ |+.|+++|++|+-+|-+
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~ 33 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGG 33 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecC
Confidence 699999999987 78899999999999864
No 493
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=63.32 E-value=66 Score=29.21 Aligned_cols=35 Identities=11% Similarity=0.092 Sum_probs=25.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEe-CCHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNE-FSYYM 223 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD-~S~~M 223 (412)
.+..||+-|++.| .++..|+++|+.|...+ -+...
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~ 62 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDH 62 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHH
Confidence 4567899997544 35788888899999888 44433
No 494
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=62.85 E-value=86 Score=28.68 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=28.4
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~ 64 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRV 64 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999998644 35777888999999999987654
No 495
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=62.83 E-value=91 Score=28.37 Aligned_cols=36 Identities=19% Similarity=0.178 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|..++.+..-+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~ 58 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKEL 58 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 4568999997533 24677788899999999987654
No 496
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=62.80 E-value=71 Score=28.82 Aligned_cols=37 Identities=11% Similarity=0.066 Sum_probs=29.0
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMMI 225 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML~ 225 (412)
++.+||+-|++.| .++..|+++|+.|..++.+..-+.
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 44 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLE 44 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 4568999997543 357788899999999999987653
No 497
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=62.67 E-value=71 Score=30.07 Aligned_cols=32 Identities=16% Similarity=0.221 Sum_probs=25.6
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCC
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFS 220 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S 220 (412)
.+..||+-|++.| .++..|+++|+.|..+|.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~ 79 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLC 79 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecc
Confidence 4568999998544 3578889999999999876
No 498
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=62.63 E-value=29 Score=35.46 Aligned_cols=121 Identities=17% Similarity=0.090 Sum_probs=69.6
Q ss_pred CCCeEEEecCCC--ChhHHHHHHcCCeEEEEeCCHHHHHHHHhhhhcccccccccccccccccCCCCCcccCccccccCC
Q 015160 189 SPPACLVPGAGL--GRLALEISHLGFISQGNEFSYYMMICSSFILNHTETAGEWNIYPWIHSNCNSLSDSDQLRPVSIPD 266 (412)
Q Consensus 189 ~~~rVLvPGCGl--GRLa~eLA~~Gf~V~GnD~S~~ML~~s~filn~~~~~~~~~I~P~i~~~sn~~s~~~qlr~v~iPD 266 (412)
.+.+|-++|+|. +.++.-|++.|+.|.+.|.+..-+.... +. + + . .+
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~---~~------~---~-----------~---~g----- 62 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVI---AE------N---P-----------G---KK----- 62 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHH---HH------S---T-----------T---SC-----
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHH---hh------C---C-----------C---CC-----
Confidence 456899999984 3467888899999999999986543211 00 0 0 0 00
Q ss_pred CCCCCCCCCCceeEEecccccccCCCCCCCCccEEEEecccCChhhHHHHHHHHHHhccCCcEEEEecCcchhhhhccCC
Q 015160 267 IHPASAGITEGFSMCGGDFVEVYSDPSQVGAWDAVVTCFFIDTAHNIVEYIEIISRILKDGGVWINLGPLLYHFADLYGQ 346 (412)
Q Consensus 267 v~p~~~~~~~~~s~~~GDF~ely~~~~~~~~fD~VvT~FFIDta~Ni~~yl~~I~~~LKPGG~wIN~GPLlyh~~~~~g~ 346 (412)
+. ...|..++-. .-+.-|+|+.+--- ...+.+.++.+...|+||-++|+.+.-.+
T Consensus 63 -----------i~-~~~s~~e~v~---~l~~aDvVil~Vp~--~~~v~~vl~~l~~~l~~g~iIId~s~g~~-------- 117 (480)
T 2zyd_A 63 -----------LV-PYYTVKEFVE---SLETPRRILLMVKA--GAGTDAAIDSLKPYLDKGDIIIDGGNTFF-------- 117 (480)
T ss_dssp -----------EE-ECSSHHHHHH---TBCSSCEEEECSCS--SSHHHHHHHHHGGGCCTTCEEEECSCCCH--------
T ss_pred -----------eE-EeCCHHHHHh---CCCCCCEEEEECCC--HHHHHHHHHHHHhhcCCCCEEEECCCCCH--------
Confidence 11 1112222211 01236888765432 22466788889999999999998543222
Q ss_pred CCCcccCCCHHHHHHHHHhCCCEEEE
Q 015160 347 EDEMSIELSLEDVKRVALHYGFEFEK 372 (412)
Q Consensus 347 ~~~~~ieLS~EEL~~ll~~~GFeii~ 372 (412)
.+.+.+.+.+.+.|..++.
T Consensus 118 -------~~t~~l~~~l~~~g~~~v~ 136 (480)
T 2zyd_A 118 -------QDTIRRNRELSAEGFNFIG 136 (480)
T ss_dssp -------HHHHHHHHHHHHTTCEEEE
T ss_pred -------HHHHHHHHHHHHCCCCeeC
Confidence 1234455556666776653
No 499
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=62.35 E-value=58 Score=29.97 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=27.3
Q ss_pred CCCeEEEecCCCC---hhHHHHHHcCCeEEEEeCCHHHH
Q 015160 189 SPPACLVPGAGLG---RLALEISHLGFISQGNEFSYYMM 224 (412)
Q Consensus 189 ~~~rVLvPGCGlG---RLa~eLA~~Gf~V~GnD~S~~ML 224 (412)
.+.+||+-|++.| .++..|+++|+.|...+.+..-+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~ 70 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGST 70 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 4568999997544 35777888899999998876543
No 500
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=62.26 E-value=5 Score=39.27 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=26.7
Q ss_pred CCeEEEecCCCChh--HHHHHHcCC-eEEEEeCC
Q 015160 190 PPACLVPGAGLGRL--ALEISHLGF-ISQGNEFS 220 (412)
Q Consensus 190 ~~rVLvPGCGlGRL--a~eLA~~Gf-~V~GnD~S 220 (412)
...|+++|+|.+.+ |+.||++|+ +|+-+|-.
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~ 39 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPY 39 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 35799999999987 688999999 99998854
Done!