Query 015162
Match_columns 412
No_of_seqs 248 out of 1032
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 07:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015162.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015162hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hks_A Heat-shock transcriptio 100.0 1.2E-39 4.1E-44 276.6 6.3 95 11-105 2-106 (106)
2 2ldu_A Heat shock factor prote 100.0 5.3E-39 1.8E-43 280.2 6.3 102 7-108 11-123 (125)
3 3hts_B Heat shock transcriptio 100.0 2.9E-33 9.9E-38 235.9 2.3 84 7-90 6-100 (102)
4 2dao_A Transcription factor ET 92.3 0.069 2.4E-06 45.7 2.7 80 7-86 2-87 (118)
5 2jee_A YIIU; FTSZ, septum, coi 91.8 0.55 1.9E-05 37.6 7.2 53 127-179 25-77 (81)
6 1wwx_A E74-like factor 5 ESE-2 90.6 0.18 6.1E-06 42.5 3.5 66 10-75 5-73 (107)
7 1awc_A Protein (GA binding pro 89.6 0.15 5.1E-06 43.1 2.2 58 18-75 5-63 (110)
8 1fli_A FLI-1; transcription/DN 89.5 0.2 6.9E-06 41.5 2.9 61 15-75 7-68 (98)
9 1bc8_C SAP-1, protein (SAP-1 E 88.9 0.21 7E-06 41.1 2.5 73 15-87 6-83 (93)
10 2ypr_A Protein FEV; transcript 87.9 0.3 1E-05 40.8 2.9 72 15-86 9-85 (102)
11 4avp_A ETS translocation varia 87.5 0.23 7.8E-06 41.7 2.0 72 15-86 13-89 (106)
12 1gvj_A C-ETS-1 protein, P54; t 86.0 0.38 1.3E-05 42.5 2.6 76 12-87 38-118 (146)
13 1wt6_A Myotonin-protein kinase 84.1 3.3 0.00011 33.0 7.0 45 124-168 26-70 (81)
14 2nny_A C-ETS-1 protein, P54; p 83.5 0.51 1.8E-05 42.7 2.4 63 14-76 65-128 (171)
15 2jee_A YIIU; FTSZ, septum, coi 82.7 9.5 0.00033 30.4 9.2 58 125-182 9-73 (81)
16 1yo5_C SAM pointed domain cont 81.3 0.6 2E-05 38.6 1.8 64 13-76 10-76 (97)
17 1deb_A APC protein, adenomatou 81.0 6.5 0.00022 28.7 6.9 45 125-169 6-50 (54)
18 3he5_B Synzip2; heterodimeric 79.5 4.3 0.00015 28.8 5.4 39 126-164 7-45 (52)
19 1hbx_G ETS-domain protein ELK- 78.3 0.76 2.6E-05 41.0 1.6 73 15-87 7-84 (157)
20 3hnw_A Uncharacterized protein 77.4 11 0.00038 32.6 8.8 49 127-175 80-128 (138)
21 3jtg_A ETS-related transcripti 77.3 0.96 3.3E-05 37.7 1.9 59 16-74 7-68 (103)
22 2xdj_A Uncharacterized protein 76.2 14 0.00047 29.5 8.3 51 136-186 20-70 (83)
23 3hnw_A Uncharacterized protein 75.7 9.3 0.00032 33.1 7.8 33 132-164 78-110 (138)
24 1a93_B MAX protein, coiled coi 74.1 3.2 0.00011 27.9 3.4 28 134-161 5-32 (34)
25 3e98_A GAF domain of unknown f 73.9 6.8 0.00023 37.1 7.0 80 84-189 37-118 (252)
26 3tnu_B Keratin, type II cytosk 73.3 16 0.00053 31.0 8.5 42 127-168 34-75 (129)
27 2lf8_A Transcription factor ET 75.5 0.7 2.4E-05 40.0 0.0 57 18-74 9-67 (128)
28 3q8t_A Beclin-1; autophagy, AT 73.1 30 0.001 28.1 9.8 49 123-171 5-53 (96)
29 2yy0_A C-MYC-binding protein; 71.7 5.4 0.00018 29.2 4.5 29 129-157 19-47 (53)
30 1pue_E Protein (transcription 71.7 1.5 5.3E-05 35.6 1.7 58 18-75 6-68 (89)
31 3a7p_A Autophagy protein 16; c 70.6 24 0.00082 31.2 9.2 35 145-179 98-132 (152)
32 2v66_B Nuclear distribution pr 70.5 29 0.00098 29.2 9.3 59 124-182 19-81 (111)
33 3cvf_A Homer-3, homer protein 69.3 7.2 0.00025 31.0 5.0 32 143-174 13-44 (79)
34 3a2a_A Voltage-gated hydrogen 68.9 9.7 0.00033 28.2 5.3 38 129-166 11-48 (58)
35 1t2k_D Cyclic-AMP-dependent tr 67.3 8.9 0.00031 28.4 5.0 26 127-152 27-52 (61)
36 3tnu_A Keratin, type I cytoske 66.8 15 0.00052 31.2 7.1 42 127-168 36-77 (131)
37 3swy_A Cyclic nucleotide-gated 66.0 23 0.00079 25.3 6.6 43 126-171 2-44 (46)
38 4etp_A Kinesin-like protein KA 65.5 13 0.00046 37.4 7.5 52 131-182 5-56 (403)
39 3cve_A Homer protein homolog 1 65.3 18 0.00061 28.2 6.5 37 142-178 6-42 (72)
40 4dzn_A Coiled-coil peptide CC- 65.1 10 0.00034 24.6 4.1 24 126-149 6-29 (33)
41 2yy0_A C-MYC-binding protein; 65.1 8.3 0.00029 28.2 4.3 30 122-151 19-48 (53)
42 2xu6_A MDV1 coiled coil; prote 64.8 9.5 0.00033 29.8 4.8 52 120-171 19-70 (72)
43 3oja_B Anopheles plasmodium-re 64.7 23 0.00077 36.4 9.3 36 125-160 505-540 (597)
44 2w83_C C-JUN-amino-terminal ki 64.2 8.1 0.00028 30.5 4.3 42 125-166 33-74 (77)
45 2wt7_A Proto-oncogene protein 63.5 13 0.00046 27.7 5.4 23 127-149 28-50 (63)
46 1ci6_A Transcription factor AT 61.9 13 0.00043 27.9 5.0 24 127-150 28-51 (63)
47 2wt7_B Transcription factor MA 61.1 13 0.00044 30.2 5.2 41 128-168 47-87 (90)
48 3swf_A CGMP-gated cation chann 60.5 36 0.0012 26.6 7.4 47 126-175 4-50 (74)
49 2dq0_A Seryl-tRNA synthetase; 57.4 42 0.0014 34.3 9.6 64 122-185 38-104 (455)
50 3vmx_A Voltage-gated hydrogen 56.3 36 0.0012 24.5 6.2 35 129-163 4-38 (48)
51 4etp_A Kinesin-like protein KA 55.7 28 0.00095 35.1 7.8 55 124-178 5-59 (403)
52 3na7_A HP0958; flagellar bioge 55.2 45 0.0016 31.1 8.8 47 125-171 35-81 (256)
53 3qne_A Seryl-tRNA synthetase, 55.1 47 0.0016 34.5 9.5 63 122-184 40-105 (485)
54 2v71_A Nuclear distribution pr 55.0 63 0.0022 29.5 9.3 23 142-164 94-116 (189)
55 3u06_A Protein claret segregat 54.6 31 0.0011 34.9 7.9 53 123-182 4-56 (412)
56 1uix_A RHO-associated kinase; 54.5 73 0.0025 24.7 8.8 28 128-155 3-30 (71)
57 1nkp_A C-MYC, MYC proto-oncoge 54.3 13 0.00043 29.7 4.0 34 129-162 52-85 (88)
58 3uux_B Mitochondrial division 54.0 19 0.00066 34.1 5.8 60 133-192 153-212 (242)
59 1nkp_B MAX protein, MYC proto- 53.5 10 0.00035 29.6 3.4 33 129-161 47-79 (83)
60 4e61_A Protein BIM1; EB1-like 52.8 43 0.0015 27.9 7.1 14 157-170 25-38 (106)
61 1wle_A Seryl-tRNA synthetase; 52.7 51 0.0018 34.2 9.4 96 89-184 43-150 (501)
62 3he5_A Synzip1; heterodimeric 51.6 55 0.0019 22.8 6.3 39 127-165 8-46 (49)
63 1wrd_A TOM1, target of MYB pro 51.2 53 0.0018 26.8 7.5 77 119-198 3-80 (103)
64 1g6u_A Domain swapped dimer; d 51.1 28 0.00095 24.2 4.7 10 127-136 5-14 (48)
65 3na7_A HP0958; flagellar bioge 51.0 72 0.0025 29.7 9.4 50 121-170 89-138 (256)
66 1s1c_X RHO-associated, coiled- 50.8 85 0.0029 24.3 9.1 60 127-186 4-68 (71)
67 1jnm_A Proto-oncogene C-JUN; B 50.6 9.9 0.00034 28.3 2.7 25 127-151 27-51 (62)
68 1hjb_A Ccaat/enhancer binding 50.3 20 0.00068 28.8 4.6 32 138-169 38-69 (87)
69 2xdj_A Uncharacterized protein 50.2 76 0.0026 25.1 8.0 34 145-178 22-55 (83)
70 1kd8_B GABH BLL, GCN4 acid bas 50.1 21 0.00072 24.1 3.9 25 126-150 5-29 (36)
71 2v66_B Nuclear distribution pr 49.9 78 0.0027 26.5 8.3 52 124-175 37-88 (111)
72 1lwu_C Fibrinogen gamma chain; 49.4 36 0.0012 33.5 7.3 12 256-267 129-140 (323)
73 3mq7_A Bone marrow stromal ant 48.6 24 0.00084 29.9 5.0 23 144-166 72-94 (121)
74 3q0x_A Centriole protein; cent 48.5 59 0.002 30.5 8.2 49 124-172 166-214 (228)
75 3u06_A Protein claret segregat 47.9 41 0.0014 34.0 7.7 39 137-175 4-42 (412)
76 3ra3_B P2F; coiled coil domain 47.4 11 0.00039 23.5 2.1 15 132-146 3-17 (28)
77 3m48_A General control protein 47.0 26 0.00089 23.3 3.9 25 126-150 4-28 (33)
78 4dzn_A Coiled-coil peptide CC- 45.3 31 0.0011 22.3 4.0 28 130-164 3-30 (33)
79 2oqq_A Transcription factor HY 45.1 46 0.0016 23.3 5.1 28 127-154 8-35 (42)
80 4ani_A Protein GRPE; chaperone 44.9 63 0.0021 30.0 7.7 38 130-167 60-97 (213)
81 1gd2_E Transcription factor PA 44.6 30 0.001 26.7 4.6 7 157-163 50-56 (70)
82 4emc_A Monopolin complex subun 43.5 42 0.0015 30.7 6.1 38 130-167 21-58 (190)
83 3ra3_B P2F; coiled coil domain 43.5 13 0.00045 23.3 1.9 18 147-164 4-21 (28)
84 1nlw_A MAD protein, MAX dimeri 43.0 22 0.00074 27.9 3.7 32 129-160 47-78 (80)
85 3efg_A Protein SLYX homolog; x 42.5 35 0.0012 26.7 4.8 42 127-168 19-60 (78)
86 4emc_A Monopolin complex subun 42.2 59 0.002 29.7 6.9 44 124-167 22-65 (190)
87 1lwu_C Fibrinogen gamma chain; 42.1 48 0.0016 32.6 6.8 35 126-160 9-43 (323)
88 3c3g_A Alpha/beta peptide with 42.1 35 0.0012 22.7 3.9 24 126-149 4-27 (33)
89 1hjb_A Ccaat/enhancer binding 41.2 57 0.0019 26.1 5.9 23 128-150 42-64 (87)
90 3a7p_A Autophagy protein 16; c 40.1 1.2E+02 0.004 26.8 8.3 69 128-196 67-136 (152)
91 1ses_A Seryl-tRNA synthetase; 39.6 47 0.0016 33.6 6.5 62 123-184 36-98 (421)
92 3oja_A Leucine-rich immune mol 38.8 90 0.0031 31.2 8.5 25 136-160 435-459 (487)
93 2w6a_A ARF GTPase-activating p 38.8 63 0.0021 24.3 5.3 36 134-169 18-53 (63)
94 1deq_A Fibrinogen (alpha chain 38.3 87 0.003 31.6 8.0 42 125-166 116-157 (390)
95 1a93_B MAX protein, coiled coi 38.2 28 0.00096 23.3 3.0 23 126-148 11-33 (34)
96 3uux_B Mitochondrial division 38.2 63 0.0022 30.6 6.6 44 125-168 180-223 (242)
97 3m91_A Proteasome-associated A 38.1 73 0.0025 23.1 5.5 36 126-161 13-48 (51)
98 1ic2_A Tropomyosin alpha chain 38.0 1.4E+02 0.0047 23.0 8.9 15 128-142 5-19 (81)
99 3mtu_A Tropomyosin alpha-1 cha 38.0 77 0.0026 24.5 6.1 42 126-167 6-47 (75)
100 2wt7_A Proto-oncogene protein 37.8 65 0.0022 23.8 5.5 31 137-167 24-54 (63)
101 3c3f_A Alpha/beta peptide with 37.8 46 0.0016 22.2 4.0 24 126-149 5-28 (34)
102 2wq1_A General control protein 37.6 45 0.0015 22.1 3.9 24 126-149 4-27 (33)
103 4h22_A Leucine-rich repeat fli 37.3 1.8E+02 0.006 24.1 8.7 41 123-163 24-64 (103)
104 1uo4_A General control protein 37.1 45 0.0016 22.3 3.9 25 126-150 5-29 (34)
105 2zqm_A Prefoldin beta subunit 37.1 81 0.0028 25.3 6.5 41 127-167 68-108 (117)
106 1x79_B RAB GTPase binding effe 37.0 1.8E+02 0.0063 24.3 8.8 51 126-179 17-67 (112)
107 3s4r_A Vimentin; alpha-helix, 36.9 54 0.0018 26.3 5.3 57 124-180 18-79 (93)
108 3i00_A HIP-I, huntingtin-inter 36.4 1.9E+02 0.0064 24.4 8.8 26 128-153 14-39 (120)
109 1kd8_A GABH AIV, GCN4 acid bas 36.0 73 0.0025 21.5 4.8 25 126-150 5-29 (36)
110 2oxj_A Hybrid alpha/beta pepti 35.8 49 0.0017 22.1 3.9 24 126-149 5-28 (34)
111 2dgc_A Protein (GCN4); basic d 35.7 40 0.0014 25.2 4.0 29 138-166 32-60 (63)
112 1kd8_A GABH AIV, GCN4 acid bas 35.5 63 0.0022 21.8 4.4 31 139-169 4-34 (36)
113 3vmx_A Voltage-gated hydrogen 35.4 1.2E+02 0.0042 21.7 6.4 39 142-180 3-41 (48)
114 1joc_A EEA1, early endosomal a 35.1 1.8E+02 0.006 24.3 8.5 27 123-149 5-31 (125)
115 2aze_A Transcription factor DP 34.4 87 0.003 27.7 6.5 32 129-160 5-36 (155)
116 2bni_A General control protein 34.2 54 0.0018 21.9 3.9 25 126-150 5-29 (34)
117 3mq7_A Bone marrow stromal ant 34.1 1.5E+02 0.005 25.2 7.5 19 141-159 76-94 (121)
118 3oja_A Leucine-rich immune mol 34.1 1.3E+02 0.0045 30.0 8.9 24 141-164 426-449 (487)
119 2akf_A Coronin-1A; coiled coil 34.0 66 0.0023 20.9 4.1 19 153-171 9-27 (32)
120 1t2k_D Cyclic-AMP-dependent tr 34.0 1.2E+02 0.004 22.2 6.3 33 137-169 23-55 (61)
121 2hy6_A General control protein 33.7 56 0.0019 21.8 3.9 24 126-149 5-28 (34)
122 3a2a_A Voltage-gated hydrogen 33.6 1.2E+02 0.0041 22.4 6.0 43 142-188 10-52 (58)
123 1gmj_A ATPase inhibitor; coile 33.6 1.5E+02 0.0053 23.6 7.2 30 140-169 48-77 (84)
124 2dq3_A Seryl-tRNA synthetase; 33.2 43 0.0015 33.8 5.1 62 123-184 38-102 (425)
125 4e61_A Protein BIM1; EB1-like 32.8 2.1E+02 0.0071 23.8 8.2 51 127-177 9-59 (106)
126 3efg_A Protein SLYX homolog; x 32.7 1E+02 0.0035 24.0 6.1 38 127-164 12-49 (78)
127 1bg1_A Protein (transcription 32.6 67 0.0023 34.2 6.5 38 122-159 13-50 (596)
128 3lss_A Seryl-tRNA synthetase; 32.2 1.5E+02 0.0053 30.6 9.1 63 122-184 44-138 (484)
129 2dfs_A Myosin-5A; myosin-V, in 31.5 1.4E+02 0.0046 34.0 9.2 6 130-135 961-966 (1080)
130 1dh3_A Transcription factor CR 31.5 51 0.0017 24.0 3.9 26 138-163 24-49 (55)
131 1fzc_C Fibrin; blood coagulati 31.4 32 0.0011 33.8 3.6 13 255-267 119-131 (319)
132 1ci6_A Transcription factor AT 31.0 1.5E+02 0.005 22.0 6.5 31 137-167 24-54 (63)
133 4gkw_A Spindle assembly abnorm 30.9 1.6E+02 0.0054 25.6 7.4 38 130-167 47-84 (167)
134 2dgc_A Protein (GCN4); basic d 30.6 59 0.002 24.3 4.2 26 126-151 34-59 (63)
135 1kd8_B GABH BLL, GCN4 acid bas 30.3 1E+02 0.0035 20.8 4.8 30 139-168 4-33 (36)
136 3cue_D Transport protein parti 30.3 34 0.0012 31.2 3.4 61 15-76 88-157 (193)
137 1jcd_A Major outer membrane li 30.1 1.4E+02 0.0048 21.6 6.0 41 126-166 8-48 (52)
138 1gu4_A CAAT/enhancer binding p 30.0 34 0.0012 26.9 2.9 29 139-167 39-67 (78)
139 1fxk_C Protein (prefoldin); ar 29.9 1.3E+02 0.0045 24.8 6.8 41 127-167 86-126 (133)
140 2r2v_A GCN4 leucine zipper; co 29.4 72 0.0025 21.3 3.9 24 126-149 5-28 (34)
141 2fcw_A Alpha-2-macroglobulin r 29.2 2.4E+02 0.008 23.6 8.0 10 119-128 21-30 (109)
142 3he5_B Synzip2; heterodimeric 29.0 1.5E+02 0.0052 20.8 5.9 37 134-170 8-44 (52)
143 1fxk_A Prefoldin; archaeal pro 28.9 93 0.0032 24.6 5.5 40 128-167 64-103 (107)
144 3m9b_A Proteasome-associated A 28.9 59 0.002 31.0 4.8 47 141-194 59-105 (251)
145 3m9b_A Proteasome-associated A 28.9 57 0.002 31.1 4.7 37 131-167 56-92 (251)
146 2w6a_A ARF GTPase-activating p 28.6 1.9E+02 0.0064 21.7 7.4 36 128-163 26-61 (63)
147 3kqg_A Langerin, C-type lectin 28.4 65 0.0022 27.5 4.8 13 127-139 4-16 (182)
148 1l8d_A DNA double-strand break 28.3 87 0.003 25.1 5.3 22 137-158 11-32 (112)
149 1bf5_A Signal transducer and a 28.3 84 0.0029 33.3 6.3 38 125-162 5-42 (575)
150 1gu4_A CAAT/enhancer binding p 28.3 1.1E+02 0.0037 23.9 5.5 21 129-149 43-63 (78)
151 4h22_A Leucine-rich repeat fli 27.7 1.5E+02 0.005 24.6 6.4 35 132-166 19-53 (103)
152 3he4_A Synzip6; heterodimeric 27.6 1.3E+02 0.0043 21.5 5.2 33 123-155 18-50 (56)
153 2eqb_B RAB guanine nucleotide 27.4 2.5E+02 0.0086 22.9 8.6 47 124-170 7-53 (97)
154 3m91_A Proteasome-associated A 26.9 1.8E+02 0.0061 21.0 6.4 39 129-167 9-47 (51)
155 1joc_A EEA1, early endosomal a 26.9 1E+02 0.0035 25.8 5.6 38 136-173 4-41 (125)
156 2dfs_A Myosin-5A; myosin-V, in 26.8 2E+02 0.0067 32.7 9.4 25 137-161 978-1002(1080)
157 1wt6_A Myotonin-protein kinase 26.7 2.4E+02 0.0081 22.3 8.8 43 137-179 25-67 (81)
158 3u1c_A Tropomyosin alpha-1 cha 26.7 2.5E+02 0.0085 22.6 9.1 47 127-173 7-60 (101)
159 3qh9_A Liprin-beta-2; coiled-c 26.6 2.4E+02 0.0082 22.3 8.6 45 126-170 23-67 (81)
160 3he4_A Synzip6; heterodimeric 26.4 1.2E+02 0.0042 21.6 4.9 35 137-171 18-52 (56)
161 2wt7_B Transcription factor MA 26.4 86 0.0029 25.3 4.7 7 98-104 25-31 (90)
162 3viq_B Mating-type switching p 26.2 2.5E+02 0.0085 22.4 9.2 58 124-182 3-66 (85)
163 3w03_C DNA repair protein XRCC 25.8 1.6E+02 0.0053 26.7 6.9 23 23-45 30-55 (184)
164 1dh3_A Transcription factor CR 25.7 61 0.0021 23.5 3.4 26 126-151 26-51 (55)
165 3iv1_A Tumor susceptibility ge 25.7 2.4E+02 0.0083 22.1 7.1 49 122-170 25-73 (78)
166 3lay_A Zinc resistance-associa 25.5 3.2E+02 0.011 24.3 8.9 38 118-155 67-104 (175)
167 3t97_C Nuclear pore glycoprote 25.2 31 0.001 26.2 1.7 19 140-158 16-34 (64)
168 3s4r_A Vimentin; alpha-helix, 25.0 2.6E+02 0.0089 22.2 9.1 35 131-165 11-45 (93)
169 3s9g_A Protein hexim1; cyclin 24.7 2.9E+02 0.01 22.7 8.2 45 127-171 35-79 (104)
170 4ani_A Protein GRPE; chaperone 24.7 2.3E+02 0.0079 26.1 8.0 45 123-167 60-104 (213)
171 1gd2_E Transcription factor PA 24.1 1.3E+02 0.0045 23.0 5.2 32 127-158 34-65 (70)
172 1ic2_A Tropomyosin alpha chain 23.7 2.5E+02 0.0085 21.5 9.1 35 136-170 20-54 (81)
173 2zdi_C Prefoldin subunit alpha 23.5 92 0.0031 26.6 4.8 43 127-169 96-138 (151)
174 2l5g_B Putative uncharacterize 23.5 1.3E+02 0.0044 21.0 4.5 6 130-135 10-15 (42)
175 3u59_A Tropomyosin beta chain; 23.3 2.8E+02 0.0097 22.1 9.1 22 127-148 7-28 (101)
176 2aze_B Transcription factor E2 23.0 98 0.0033 25.5 4.6 27 141-167 11-37 (106)
177 3v86_A De novo design helix; c 22.8 1.1E+02 0.0037 19.0 3.5 23 126-148 4-26 (27)
178 3ghg_A Fibrinogen alpha chain; 22.8 1.9E+02 0.0066 30.3 7.6 13 161-173 114-126 (562)
179 1sz7_A BET3 homolog, trafficki 22.7 61 0.0021 29.7 3.6 62 15-77 85-154 (200)
180 1fmh_B General control protein 22.6 1.2E+02 0.0039 19.6 3.8 12 152-163 17-28 (33)
181 1go4_E MAD1 (mitotic arrest de 22.6 1.1E+02 0.0039 25.1 4.8 30 130-159 13-42 (100)
182 1fzc_C Fibrin; blood coagulati 22.4 75 0.0026 31.2 4.4 22 129-150 4-25 (319)
183 3mtu_E Head morphogenesis prot 22.3 2.1E+02 0.0073 22.4 6.1 38 145-182 32-69 (77)
184 3o0z_A RHO-associated protein 22.3 3.2E+02 0.011 24.4 8.1 34 137-170 98-131 (168)
185 3c3g_A Alpha/beta peptide with 21.5 1.4E+02 0.0048 19.8 4.1 28 139-166 3-30 (33)
186 2pnv_A Small conductance calci 21.4 1.1E+02 0.0039 21.3 3.9 22 149-170 15-36 (43)
187 1m1j_C Fibrinogen gamma chain; 21.1 2.5E+02 0.0084 28.4 8.0 13 255-267 206-218 (409)
188 1deb_A APC protein, adenomatou 20.9 2.5E+02 0.0084 20.4 7.1 43 140-182 7-49 (54)
189 3o0z_A RHO-associated protein 20.3 4.6E+02 0.016 23.3 9.4 21 127-147 53-73 (168)
190 3a7o_A Autophagy protein 16; c 20.2 2.4E+02 0.0082 21.8 5.8 19 130-148 19-37 (75)
191 1i84_S Smooth muscle myosin he 20.1 2.3E+02 0.0078 32.3 8.3 22 126-147 861-882 (1184)
No 1
>1hks_A Heat-shock transcription factor; transcription regulation; NMR {Drosophila melanogaster} SCOP: a.4.5.22 PDB: 1hkt_A
Probab=100.00 E-value=1.2e-39 Score=276.63 Aligned_cols=95 Identities=47% Similarity=0.840 Sum_probs=91.3
Q ss_pred CCCCchHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccccccCCCCchhhhhccccccccccC----------
Q 015162 11 NSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPLYFKHNNFSSFVRQLNTYGFRKID---------- 80 (412)
Q Consensus 11 ~~~~~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~---------- 80 (412)
+++|+||.|||+||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+|||||||+|||||+.
T Consensus 2 ~~~p~F~~KL~~mv~d~~~~~iI~W~~~G~sFvI~d~~~F~~~vLp~yFkh~n~~SFvRQLN~YGF~Kv~~~~~~~~~~~ 81 (106)
T 1hks_A 2 SGVPAFLAKLWRLVDDADTNRLICWTKDGQSFVIQNQAQFAKELLPLNYKHNNMASFIRQLNMYGFHKITSIDNGGLRFD 81 (106)
T ss_dssp TTCCTTHHHHHHHHSSSTTTTTSEESTTTSCEECSCCSTTTTTTSTTTTSCCCHHHHHHHHHHHCCCCSSCSSSCCSSCT
T ss_pred CCcCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEECCHHHHHHHHhHHhcCCCcHHHHHHhhhcCCCeEEecccccCccCC
Confidence 4678999999999999999999999999999999999999999999999999999999999999999984
Q ss_pred CCCcccccccccccccccccccccc
Q 015162 81 PDQWEFANEEFIRGQRHLLKNIHRR 105 (412)
Q Consensus 81 ~~~~eF~h~~F~Rg~~~lL~~I~Rr 105 (412)
++.|+|+|++|+||+|+||.+|+||
T Consensus 82 ~~~~ef~h~~F~Rg~~~LL~~IkRk 106 (106)
T 1hks_A 82 RDEIEFSHPFFKRNSPFLLDQIKRK 106 (106)
T ss_dssp TSTTEECCTTCCSSCTTSTTTCCCC
T ss_pred CCceEEECcCccCcCHHHHhhCcCC
Confidence 4789999999999999999999996
No 2
>2ldu_A Heat shock factor protein 1; structural genomics, northeast structural genomics consortiu DNA-binding, PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=280.21 Aligned_cols=102 Identities=49% Similarity=0.851 Sum_probs=96.6
Q ss_pred CCCCCCCCchHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccccccCCCCchhhhhccccccccccC------
Q 015162 7 QGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPLYFKHNNFSSFVRQLNTYGFRKID------ 80 (412)
Q Consensus 7 ~~~~~~~~~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~------ 80 (412)
-.....+|+||.|||+||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+|||+||.
T Consensus 11 ~~~~~~~~~F~~KL~~ml~d~~~~~iI~W~~~G~sFvV~d~~~F~~~vLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~~~ 90 (125)
T 2ldu_A 11 MAGPSNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFKHNNMASFVRQLNMYGFRKVVHIEQGG 90 (125)
T ss_dssp CCSSCCCCHHHHHHHHHHHCTTTTTTEEECTTSSEEEECCHHHHHHHHHHHHSSCCCHHHHHHHHHHTTCEEEECSCCSS
T ss_pred cccCCCCCcHHHHHHHHhhCCCCCCEEEEcCCCCEEEEeCHHHHHHHHhHHhcCCCcHHHHHHHhcccCceEEeeccccc
Confidence 35677899999999999999999999999999999999999999999999999999999999999999999983
Q ss_pred -----CCCcccccccccccccccccccccccCC
Q 015162 81 -----PDQWEFANEEFIRGQRHLLKNIHRRKPV 108 (412)
Q Consensus 81 -----~~~~eF~h~~F~Rg~~~lL~~I~Rr~~~ 108 (412)
++.|+|+||+|+||+++||.+|+||+++
T Consensus 91 ~~~~~~~~~eF~H~~F~Rg~~~LL~~IkRk~~~ 123 (125)
T 2ldu_A 91 LVKPERDDTEFQHPCFLRGQEQLLENIKRKVTS 123 (125)
T ss_dssp SSSCSSCCEEEECTTCBTTBGGGTTTSCCCTTS
T ss_pred cccCCCCccEEECccccCCCHHHHhhCcCCCCC
Confidence 4689999999999999999999999874
No 3
>3hts_B Heat shock transcription factor; transcription regulation, DNA-binding protein, complex (WING helix_TURN_ helix-DNA); 1.75A {Kluyveromyces lactis} SCOP: a.4.5.22 PDB: 2hts_A 1fyk_A* 1fym_A 1fyl_A 3hsf_A 1fbu_A 1fbs_A 1fbq_A
Probab=99.97 E-value=2.9e-33 Score=235.87 Aligned_cols=84 Identities=44% Similarity=0.818 Sum_probs=77.9
Q ss_pred CCCCCCCCchHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccccccCCCCchhhhhccccccccccC------
Q 015162 7 QGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPLYFKHNNFSSFVRQLNTYGFRKID------ 80 (412)
Q Consensus 7 ~~~~~~~~~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp~~Fkh~nfsSFvRQLN~YGF~Kv~------ 80 (412)
+.+...+|+|+.|||.||+||++++||+|+++|++|||+|+.+|+++|||+||||+||+||+||||+||||||.
T Consensus 6 s~~~~~~p~F~~KL~~ml~d~~~~~iI~W~~~G~sfiI~d~~~F~~~VLp~yFkh~nfsSFvRQLN~YGF~Kv~~~~~g~ 85 (102)
T 3hts_B 6 SVGSMARPAFVNKLWSMVNDKSNEKFIHWSTSGESIVVPNRERFVQEVLPKYFKHSNFASFVRQLNMYGWHKVQDVKSGS 85 (102)
T ss_dssp ----CCSCHHHHHHHHHHHCGGGTTTSEECTTSCSEEESCHHHHHHHTHHHHCSSCCHHHHHHHHHHTTEEECC------
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCEEEEeCCCCEEEEcCHHHHHHHHHHHhcCCCcHHHHHHHhhcCCceEeeccccCc
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -----CCCccccccc
Q 015162 81 -----PDQWEFANEE 90 (412)
Q Consensus 81 -----~~~~eF~h~~ 90 (412)
++.|||+|++
T Consensus 86 ~~~~~~~~wEF~n~~ 100 (102)
T 3hts_B 86 MLSNNDSRWEFENER 100 (102)
T ss_dssp ---CCSCCEEEEECC
T ss_pred ccCCCcCCeEecCCC
Confidence 6899999986
No 4
>2dao_A Transcription factor ETV6; ETS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.31 E-value=0.069 Score=45.69 Aligned_cols=80 Identities=16% Similarity=0.276 Sum_probs=58.1
Q ss_pred CCCCCCCCchHHHHHHhhcCCCCCCceEEcC-CCCeEEEeCCchhhhhccc-cccCCCCchhhhhccccc---cc-cccC
Q 015162 7 QGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQ-SGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTY---GF-RKID 80 (412)
Q Consensus 7 ~~~~~~~~~Fl~KLy~mv~d~~~~~iI~W~~-~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~Y---GF-~Kv~ 80 (412)
+|+.++....-.-|.++|.|+.+.++|+|.. ++.-|.+.|+++.++.--. +-=..-||.-+-|-|..| |+ +||.
T Consensus 2 ~~~~~g~~~LwqFLleLL~d~~~~~~I~W~~~~~g~Fklvdp~~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~ 81 (118)
T 2dao_A 2 SSGSSGCRLLWDYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHYYKLNIIRKEP 81 (118)
T ss_dssp CCCCCCCCCHHHHHHHHHHCGGGTTTEEEEEGGGTEEEESCHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHTSEECCS
T ss_pred CCccCcchHHHHHHHHHhCCcccCCceEeeCCCCCeEEEeCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCCEEecc
Confidence 4555666677778899999999999999987 5568999999888875222 222456888999999888 43 5555
Q ss_pred CCCccc
Q 015162 81 PDQWEF 86 (412)
Q Consensus 81 ~~~~eF 86 (412)
..+..|
T Consensus 82 G~r~vY 87 (118)
T 2dao_A 82 GQRLLF 87 (118)
T ss_dssp SSSSEE
T ss_pred CCeEEE
Confidence 455444
No 5
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=91.81 E-value=0.55 Score=37.63 Aligned_cols=53 Identities=21% Similarity=0.340 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIAC 179 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsf 179 (412)
+.-+|+.||.++..|..+...++.....+..+.+.|++.+..-+.+.+.|+..
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34577777777777777777766666667777777777666555555555544
No 6
>1wwx_A E74-like factor 5 ESE-2B; DNA binding, transcriptional activation and repression, structural genomics; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=90.64 E-value=0.18 Score=42.47 Aligned_cols=66 Identities=17% Similarity=0.222 Sum_probs=46.7
Q ss_pred CCCCCchHHHHHHhhcCCC-CCCceEEcC-CCCeEEEeCCchhhhhccc-cccCCCCchhhhhcccccc
Q 015162 10 SNSPAPFLIKTYEMVDDPL-TNSLVSWSQ-SGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYG 75 (412)
Q Consensus 10 ~~~~~~Fl~KLy~mv~d~~-~~~iI~W~~-~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG 75 (412)
+++......=|.++|.||+ ..+||+|.. +..-|.+.|+++.++.--. +-=..-||..+-|-|..|.
T Consensus 5 ~~g~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 73 (107)
T 1wwx_A 5 SSGSSHLWEFVRDLLLSPEENCGILEWEDREQGIFRVVKSEALAKMWGQRKKNDRMTYEKLSRALRYYY 73 (107)
T ss_dssp CCSSCCHHHHHHHHHHCTTTCCSCCEEEETTTTEEECSCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHH
T ss_pred CCCcEEHHHHHHHHHcCcccCCCcEEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence 3334466677788999886 568999986 5678999999888875221 1113567888888887773
No 7
>1awc_A Protein (GA binding protein alpha); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: a.4.5.21
Probab=89.61 E-value=0.15 Score=43.14 Aligned_cols=58 Identities=21% Similarity=0.247 Sum_probs=43.5
Q ss_pred HHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhcccc-ccCCCCchhhhhcccccc
Q 015162 18 IKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPL-YFKHNNFSSFVRQLNTYG 75 (412)
Q Consensus 18 ~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp~-~Fkh~nfsSFvRQLN~YG 75 (412)
.=|.++|.||++.++|+|...+.-|.+.|+++.++.--.+ -=..-||...-|-|..|.
T Consensus 5 qFLleLL~d~~~~~~I~W~~~~geFkl~d~e~VArlWG~rKnkp~MnYeKlSRaLRyYY 63 (110)
T 1awc_A 5 QFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQKWGQRKNKPTMNYEKLSRALRYYY 63 (110)
T ss_dssp HHHHHHHTCTTTTTTSEECSSSSEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGG
T ss_pred HHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHHccCCCCCCHHHHHHHHHHHH
Confidence 3467889999999999999988899999998887752221 113446777777777763
No 8
>1fli_A FLI-1; transcription/DNA; NMR {Homo sapiens} SCOP: a.4.5.21
Probab=89.49 E-value=0.2 Score=41.52 Aligned_cols=61 Identities=20% Similarity=0.336 Sum_probs=44.3
Q ss_pred chHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhcccccc
Q 015162 15 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYG 75 (412)
Q Consensus 15 ~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG 75 (412)
....=|.++|+|+...++|+|...+.-|.+.|+++.++.--. +-=..-||.-+-|-|..|-
T Consensus 7 ~LwqFL~~LL~d~~~~~~I~W~~~~g~Fklvd~e~VArlWG~rK~kp~MnYeklSRaLRyYY 68 (98)
T 1fli_A 7 QLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYY 68 (98)
T ss_dssp CSHHHHHHHHHTCSSCSSEECTTSSSSCEECCHHHHHHHHHHHTCCTTCSSHHHHHHHHHHH
T ss_pred eHHHHHHHHhcCcccCCCeEEeCCCCEEEEcCHHHHHHHHHhccCCCCcCHHHHHHHHHHHH
Confidence 334445677899999999999988889999999888874221 1113557777777777763
No 9
>1bc8_C SAP-1, protein (SAP-1 ETS domain); DNA-binding domain, winged helix-turn-helix, DNA-binding specificity, transcription/DNA complex; HET: DNA; 1.93A {Homo sapiens} SCOP: a.4.5.21 PDB: 1bc7_C* 1k6o_A 1dux_C*
Probab=88.90 E-value=0.21 Score=41.09 Aligned_cols=73 Identities=14% Similarity=0.341 Sum_probs=52.4
Q ss_pred chHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhcccccc---c-cccCCCCcccc
Q 015162 15 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYG---F-RKIDPDQWEFA 87 (412)
Q Consensus 15 ~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG---F-~Kv~~~~~eF~ 87 (412)
....=|.++|.||+..++|+|...+.-|.+.|+++.++.--. +-=..-||...-|-|..|- + +||...+..|.
T Consensus 6 ~Lw~FL~~LL~d~~~~~~I~W~~~~g~Fkl~d~~~VArlWG~rKnk~~MnYeklSRaLRyYY~~~il~Kv~g~r~vY~ 83 (93)
T 1bc8_C 6 TLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 83 (93)
T ss_dssp CHHHHHHHHTTCGGGTTTSEECSSSSEEECTTHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHTSEEECTTSTTEEE
T ss_pred cHHHHHHHHhcCcccCCceEEeCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEE
Confidence 455567889999999999999987779999999988875222 1124568888888888773 2 44544444443
No 10
>2ypr_A Protein FEV; transcription; 2.64A {Homo sapiens} PDB: 1fli_A
Probab=87.86 E-value=0.3 Score=40.76 Aligned_cols=72 Identities=17% Similarity=0.332 Sum_probs=50.8
Q ss_pred chHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhcccccc---c-cccCCCCccc
Q 015162 15 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYG---F-RKIDPDQWEF 86 (412)
Q Consensus 15 ~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG---F-~Kv~~~~~eF 86 (412)
....=|.++|+|+++.++|+|...+.-|.+.|+++.++.--. +-=..-||.-+-|-|..|- . +||...+..|
T Consensus 9 ~LwqFLl~LL~d~~~~~~I~W~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyYY~k~ii~Kv~Gkr~vY 85 (102)
T 2ypr_A 9 QLWQFLLELLADRANAGCIAWEGGHGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMSKVHGKRYAY 85 (102)
T ss_dssp CHHHHHHHHHTCGGGTTTCEECSSTTEEECSSHHHHHHHHHHHTTCTTCCHHHHHHHHTHHHHTTSEEECSSCSSEE
T ss_pred eHHHHHHHHhcCCCCCCcccccCCCceEEecChHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEE
Confidence 345556788999999999999988899999999888874111 1113568888888887773 2 4555444444
No 11
>4avp_A ETS translocation variant 1; transcription, transcriptional activation and repression, DN binding protein, E twenty-SIX, erwing sarcoma; 1.82A {Homo sapiens} PDB: 4b06_A
Probab=87.45 E-value=0.23 Score=41.75 Aligned_cols=72 Identities=19% Similarity=0.424 Sum_probs=52.4
Q ss_pred chHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhccccc---cc-cccCCCCccc
Q 015162 15 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTY---GF-RKIDPDQWEF 86 (412)
Q Consensus 15 ~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~Y---GF-~Kv~~~~~eF 86 (412)
....=|.++|+|+++.++|+|...+..|.+.|+++.++.--. +-=..-||..+-|-|..| |. +||...+..|
T Consensus 13 ~LwqFL~~LL~d~~~~~~I~W~~~~~~Fkl~dp~~VA~lWG~rKnkp~M~YeKlSRaLRyYY~kgii~Kv~G~r~vY 89 (106)
T 4avp_A 13 QLWQFLVALLDDPSNSHFIAWTGRGMEFKLIEPEEVARRWGIQKNRPAMNYDKLSRSLRYYYEKGIMQKVAGERYVY 89 (106)
T ss_dssp CHHHHHHHHHHCGGGTTTEEECSSTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEECTTCSSEE
T ss_pred eHHHHHHHHHcCccCCCCCcccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCeEEecCCCeEEE
Confidence 455567888999999999999998889999999888874221 112456888888888777 33 5565555444
No 12
>1gvj_A C-ETS-1 protein, P54; transcription, autoinhibition, ETS domain; 1.53A {Homo sapiens} SCOP: a.4.5.21 PDB: 1md0_A 1r36_A 1k78_B 1k79_A* 1k7a_A* 2stt_A* 2stw_A*
Probab=85.98 E-value=0.38 Score=42.52 Aligned_cols=76 Identities=20% Similarity=0.312 Sum_probs=54.3
Q ss_pred CCCchHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhccccccc----cccCCCCccc
Q 015162 12 SPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYGF----RKIDPDQWEF 86 (412)
Q Consensus 12 ~~~~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YGF----~Kv~~~~~eF 86 (412)
+......=|.++|.|+...++|+|...+..|.+.|+++.++.--. +-=..-||.-.-|-|..|-= +||...+..|
T Consensus 38 g~i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~k~ii~Kv~GkrlvY 117 (146)
T 1gvj_A 38 GPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVY 117 (146)
T ss_dssp CSCCHHHHHHHHHTCGGGTTTSEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHTTSEEECTTSSSEE
T ss_pred CceeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCcEEecCCCeEEE
Confidence 344566677889999999999999999999999999998875222 11235578888888887743 3454444444
Q ss_pred c
Q 015162 87 A 87 (412)
Q Consensus 87 ~ 87 (412)
.
T Consensus 118 ~ 118 (146)
T 1gvj_A 118 R 118 (146)
T ss_dssp E
T ss_pred E
Confidence 3
No 13
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=84.10 E-value=3.3 Score=33.03 Aligned_cols=45 Identities=27% Similarity=0.543 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
++.+.+++.+.|.++..+..+|+..+.+++.|..+|..+++++..
T Consensus 26 KQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~ee 70 (81)
T 1wt6_A 26 RQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMEL 70 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677788888888888888888888888888888888777653
No 14
>2nny_A C-ETS-1 protein, P54; protein-DNA complex, transcription/DNA complex; 2.58A {Homo sapiens} PDB: 3ri4_A 3mfk_A 1mdm_B
Probab=83.54 E-value=0.51 Score=42.66 Aligned_cols=63 Identities=21% Similarity=0.291 Sum_probs=47.4
Q ss_pred CchHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhccccccc
Q 015162 14 APFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYGF 76 (412)
Q Consensus 14 ~~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YGF 76 (412)
.....=|.++|.|+...++|+|...+.-|.+.|+++.++.--. +-=..-||.-.-|-|..|-=
T Consensus 65 i~LwqFLleLL~d~~~~~~I~Wt~~~~eFklvdpe~VArlWG~rKnkp~MnYeKLSRaLRyYY~ 128 (171)
T 2nny_A 65 IQLWQFLLELLTDKSSQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYD 128 (171)
T ss_dssp CCHHHHHHHHHTCTGGGGTCEECSSTTEEECSSHHHHHHHHHHHHTCTTCCHHHHHHHHHGGGT
T ss_pred eeHHHHHHHHhcCcccCCceEeeCCCCEEEeCCHHHHHHHHHhccCCCCCCHHHHHHHHHHHHh
Confidence 3455567888999999999999999999999999998875222 11134567888888877743
No 15
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=82.68 E-value=9.5 Score=30.42 Aligned_cols=58 Identities=22% Similarity=0.310 Sum_probs=40.0
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQS-------VRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~-------L~erL~~~e~~Qq~mlsfL~~ 182 (412)
..++.+|..+=..+..|..|+..|++++..+..+.+. |.+......+.|...-..|..
T Consensus 9 eqLE~KIq~avdtI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~ 73 (81)
T 2jee_A 9 EKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQA 73 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777777788888888888888888888877 555555555544444444443
No 16
>1yo5_C SAM pointed domain containing ETS transcription factor; protein-DNA complex, double helix, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.4.5.21
Probab=81.27 E-value=0.6 Score=38.62 Aligned_cols=64 Identities=16% Similarity=0.202 Sum_probs=46.9
Q ss_pred CCchHHHHHHhhcCCC-CCCceEEcC-CCCeEEEeCCchhhhhccc-cccCCCCchhhhhccccccc
Q 015162 13 PAPFLIKTYEMVDDPL-TNSLVSWSQ-SGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYGF 76 (412)
Q Consensus 13 ~~~Fl~KLy~mv~d~~-~~~iI~W~~-~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YGF 76 (412)
......=|.++|.||+ ..++|+|.. .+.-|.+.|+++.++.--. +-=..-||..+-|-|..|--
T Consensus 10 ~i~LwqFL~eLL~d~~~~~~~I~W~~~~~g~Fkl~d~~~VArlWG~rKnkp~MnYeklSRaLRyYY~ 76 (97)
T 1yo5_C 10 PIHLWQFLKELLLKPHSYGRFIRWLNKEKGIFKIEDSAQVARLWGIRKNRPAMNYDKLSRSIRQYYK 76 (97)
T ss_dssp CCCHHHHHHHHHHCHHHHTTTEEEEETTTTEEEESCHHHHHHHHHHHHTCTTCCHHHHHHHHHHTTT
T ss_pred eeEHHHHHHHHhcCcccCCCceEeecCCCCEEEecCHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHh
Confidence 3356667788999986 589999984 6788999999888875222 22235688888888888854
No 17
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=80.98 E-value=6.5 Score=28.66 Aligned_cols=45 Identities=29% Similarity=0.389 Sum_probs=36.8
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
+.+..+++.||+++..|..||...-.+...++.+...|++-+...
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 456778999999999999999988888888888888888766543
No 18
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=79.51 E-value=4.3 Score=28.75 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
-+...|.+||+|+-.|...-+.|+.-..++..++..|+.
T Consensus 7 ylrkkiarlkkdnlqlerdeqnlekiianlrdeiarlen 45 (52)
T 3he5_B 7 YLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLEN 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 356788999999877776655554444444444444433
No 19
>1hbx_G ETS-domain protein ELK-4; gene regulation, transcription complex; 3.15A {Homo sapiens} SCOP: a.4.5.21
Probab=78.35 E-value=0.76 Score=40.97 Aligned_cols=73 Identities=14% Similarity=0.341 Sum_probs=52.7
Q ss_pred chHHHHHHhhcCCCCCCceEEcCCCCeEEEeCCchhhhhccc-cccCCCCchhhhhcccccc---c-cccCCCCcccc
Q 015162 15 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTYG---F-RKIDPDQWEFA 87 (412)
Q Consensus 15 ~Fl~KLy~mv~d~~~~~iI~W~~~G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~YG---F-~Kv~~~~~eF~ 87 (412)
....-|.++|.|+...++|+|...+.-|.+.|+++.++.--. +-=..-||..+-|-|..|- + +||...+..|.
T Consensus 7 ~LWqFLleLL~d~~~~~~I~Wt~~~geFklvdpe~VArLWG~rKnkp~MnYeKLSRALRyYY~k~Ii~KV~GqrlvYk 84 (157)
T 1hbx_G 7 TLWQFLLQLLQKPQNKHMICWTSNDGQFKLLQAEEVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYK 84 (157)
T ss_dssp CHHHHTTTSSSCGGGTTTEEECSSSSCEEETTHHHHHHHHHHGGGCTTCCHHHHHHHHHHHHHTTSEEECSSCTTEEE
T ss_pred cHHHHHHHHhcCcccCCceEEeCCCCEEEecCcHHHHHHHHhccCCCCcCHHHHHHHHHHHHhcCcEEecCCCeEEEe
Confidence 445567888999999999999987779999999988875222 1224568888888888874 2 44544555554
No 20
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=77.35 E-value=11 Score=32.64 Aligned_cols=49 Identities=14% Similarity=0.148 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQ 175 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~ 175 (412)
+..+++.+.++...|..+|..++.+...+..++..+++++..++.+..+
T Consensus 80 L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~ 128 (138)
T 3hnw_A 80 LSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVK 128 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444445555554445555555555555554444443333
No 21
>3jtg_A ETS-related transcription factor ELF-3; ELF3, protein-DNA complex, type II TGF-beta receptor, activa alternative splicing, cytoplasm; HET: DNA; 2.20A {Mus musculus} SCOP: a.4.5.21
Probab=77.26 E-value=0.96 Score=37.73 Aligned_cols=59 Identities=14% Similarity=0.226 Sum_probs=42.6
Q ss_pred hHHHHHHhhcCCC-CCCceEEcCC-CCeEEEeCCchhhhhccc-cccCCCCchhhhhccccc
Q 015162 16 FLIKTYEMVDDPL-TNSLVSWSQS-GGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTY 74 (412)
Q Consensus 16 Fl~KLy~mv~d~~-~~~iI~W~~~-G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~Y 74 (412)
...=|.++|.|++ ..++|+|... ..-|.+.|+++.++.--. +-=...||..+-|-|..|
T Consensus 7 LwqFL~~LL~d~~~~~~~I~W~~~~~g~Fkl~dp~~VArlWG~rKnkp~MnYeKlSRaLRyY 68 (103)
T 3jtg_A 7 LWEFIRDILIHPELNEGLMKWENRHEGVFKFLRSEAVAQLWGQKKKNSNMTYEKLSRAMRYY 68 (103)
T ss_dssp HHHHHHHHHTCGGGCSSCEEEEETTTTEEEESSHHHHHHHHHHHTTCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCCCccccccCCCceEEecCHHHHHHHHHhccCCCCcCHHHHHHHHHHH
Confidence 3445678889987 5789999874 568999999888864111 111456888888888777
No 22
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=76.23 E-value=14 Score=29.47 Aligned_cols=51 Identities=20% Similarity=0.206 Sum_probs=35.1
Q ss_pred HHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015162 136 KENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKK 186 (412)
Q Consensus 136 ~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq~ 186 (412)
+-+..|..+|..|+++...|..++..+.-.|..+.++|+.+..=|.+.+..
T Consensus 20 q~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl~~ 70 (83)
T 2xdj_A 20 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLSSG 70 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 345567777777777777777777777777888888888888776665554
No 23
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=75.69 E-value=9.3 Score=33.14 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=12.0
Q ss_pred HHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHH
Q 015162 132 ERLKKENSLLQLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 132 ~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
+.|..+...+..|+..|+++...++.++..+++
T Consensus 78 ~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~ 110 (138)
T 3hnw_A 78 DSLSLDIENKDKEIYDLKHELIAAQIKAESSAK 110 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333333333
No 24
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=74.05 E-value=3.2 Score=27.93 Aligned_cols=28 Identities=18% Similarity=0.306 Sum_probs=14.8
Q ss_pred HHHHhHHHHHHHHHHhhccHHHHHHHHH
Q 015162 134 LKKENSLLQLELRRRESGNHEFEYHVQS 161 (412)
Q Consensus 134 LK~d~~~L~~EL~rL~qqqq~l~~qvq~ 161 (412)
|++.+.+..+++..|+.|+..|+.|+..
T Consensus 5 mRrKn~a~qqDIddlkrQN~~Le~Qir~ 32 (34)
T 1a93_B 5 MRRKNDTHQQDIDDLKRQNALLEQQVRA 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 3445555555555555555555555443
No 25
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=73.85 E-value=6.8 Score=37.08 Aligned_cols=80 Identities=14% Similarity=0.172 Sum_probs=29.8
Q ss_pred ccc--ccccccccccccccccccccCCCCCCCCCCCCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHH
Q 015162 84 WEF--ANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPITETERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQS 161 (412)
Q Consensus 84 ~eF--~h~~F~Rg~~~lL~~I~Rr~~~~s~~~~~~~~~t~~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~ 161 (412)
-+| .||.|--.+++||..|+=.-+. .+ . ......++.+||+++..++.++..
T Consensus 37 ~~yL~~~PdFf~~~~~Ll~~L~lph~~-----~~--a-------------------VSL~erQ~~~LR~r~~~Le~~L~~ 90 (252)
T 3e98_A 37 AAYLSQHPEFFVEHDELIPELRIPHQP-----GD--A-------------------VSLVERQVRLLRERNIEMRHRLSQ 90 (252)
T ss_dssp --------------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHhhCHHHHHhCCCCCCC-----CC--c-------------------ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 355 9999999999999988743221 00 0 112223345555555666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCch
Q 015162 162 VRERLRYLENRQTQMIACLANLLKKPGF 189 (412)
Q Consensus 162 L~erL~~~e~~Qq~mlsfL~~vlq~p~f 189 (412)
|.+.-+..+...+++..+..+++.-..+
T Consensus 91 Li~~A~~Ne~l~~~~~~l~l~LL~a~sl 118 (252)
T 3e98_A 91 LMDVARENDRLFDKTRRLVLDLLDATSL 118 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 6666666666667777766666655543
No 26
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=73.28 E-value=16 Score=30.99 Aligned_cols=42 Identities=10% Similarity=0.150 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
...+|..|++....|..||..++.++..|+..+..++.+...
T Consensus 34 ~k~Ei~elrr~iq~L~~el~~l~~~~~~LE~~l~e~e~~~~~ 75 (129)
T 3tnu_B 34 TKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGEL 75 (129)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 467888888888899999998888888888888888887653
No 27
>2lf8_A Transcription factor ETV6; auto-inhibition; NMR {Mus musculus}
Probab=75.53 E-value=0.7 Score=39.95 Aligned_cols=57 Identities=16% Similarity=0.327 Sum_probs=38.7
Q ss_pred HHHHHhhcCCCCCCceEEcCC-CCeEEEeCCchhhhhccc-cccCCCCchhhhhccccc
Q 015162 18 IKTYEMVDDPLTNSLVSWSQS-GGSFIVWNPPDFAKDLLP-LYFKHNNFSSFVRQLNTY 74 (412)
Q Consensus 18 ~KLy~mv~d~~~~~iI~W~~~-G~sFiI~d~~~F~~~vLp-~~Fkh~nfsSFvRQLN~Y 74 (412)
.-|.++|.|+.+.++|+|... +.-|.+.|+++.++.--. +-=+.-||.-+-|-|..|
T Consensus 9 qFLleLL~d~~~~~~I~Wt~k~~geFklvdpe~VArlWG~rKnkp~MnYeKLSRALRyY 67 (128)
T 2lf8_A 9 DYVYQLLSDSRYENFIRWEDKESKIFRIVDPNGLARLWGNHKNRTNMTYEKMSRALRHY 67 (128)
Confidence 346778999999999999874 458999999877764211 111234566666666655
No 28
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=73.09 E-value=30 Score=28.07 Aligned_cols=49 Identities=16% Similarity=0.270 Sum_probs=42.0
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
+...+..++..|+.+-..|..+|..+..+...+..++..++........
T Consensus 5 ~~~~l~~eL~~l~~eE~~L~~eL~~lEke~~~l~~el~~le~E~~~L~~ 53 (96)
T 3q8t_A 5 DSEQLQRELKELALEEERLIQELEDVEKNRKVVAENLEKVQAEAERLDQ 53 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 4567888999999999999999999999999999999988887666554
No 29
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=71.70 E-value=5.4 Score=29.24 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=15.5
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEY 157 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~ 157 (412)
.+++.|+.++..|..++..|+++++.+..
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666665555555555544444333
No 30
>1pue_E Protein (transcription factor PU.1 (TF PU.1)); complex (transcription regulating/DNA), oncogene, transforming protein, DNA- binding, activator; HET: DNA; 2.10A {Mus musculus} SCOP: a.4.5.21
Probab=71.66 E-value=1.5 Score=35.56 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=40.8
Q ss_pred HHHHHhhcCCCCCCceEEcC-CCCeEEEe--CCchhhhhcccc--ccCCCCchhhhhcccccc
Q 015162 18 IKTYEMVDDPLTNSLVSWSQ-SGGSFIVW--NPPDFAKDLLPL--YFKHNNFSSFVRQLNTYG 75 (412)
Q Consensus 18 ~KLy~mv~d~~~~~iI~W~~-~G~sFiI~--d~~~F~~~vLp~--~Fkh~nfsSFvRQLN~YG 75 (412)
.=|.++|.|++..++|+|.. +..-|-+. |+++.++.--.+ .=+.-||...-|-|..|.
T Consensus 6 qFL~~LL~d~~~~~~I~W~~~~~g~Fk~~~~~~e~VArlWG~rK~Nk~~MnYeKlSRaLRyYY 68 (89)
T 1pue_E 6 QFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKGNRKKMTYEKMARALRNYG 68 (89)
T ss_dssp HHHHHHHHHTCCTTTEEEEETTTTEEEECTTTHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCcccCCceEeecCCCcEEEEecCChHHHHHHhhcccCCCCCcCHHHHHHHHHHHH
Confidence 34678899999999999986 44668775 677777642221 123567888888887773
No 31
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=70.55 E-value=24 Score=31.22 Aligned_cols=35 Identities=14% Similarity=0.170 Sum_probs=23.6
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 145 LRRRESGNHEFEYHVQSVRERLRYLENRQTQMIAC 179 (412)
Q Consensus 145 L~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsf 179 (412)
+..++.+...+..|+..+++++..++..-+.++.-
T Consensus 98 ~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~R 132 (152)
T 3a7p_A 98 TERLNAALISGTIENNVLQQKLSDLKKEHSQLVAR 132 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666777777777777777777766666653
No 32
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=70.52 E-value=29 Score=29.17 Aligned_cols=59 Identities=17% Similarity=0.226 Sum_probs=35.4
Q ss_pred hhhHHHHHHHHHHH----hHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKE----NSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 124 ~~~l~~eI~~LK~d----~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
...+..++...+.+ ...|..||..|+..+..+...+..|++.-...|..-+...+.|..
T Consensus 19 ~e~~k~K~~~~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD 81 (111)
T 2v66_B 19 VEALKEKLEHQYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLED 81 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHH
Confidence 33444444444443 445677777777777777777777777666666665555555544
No 33
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=69.26 E-value=7.2 Score=30.97 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=13.3
Q ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Q 015162 143 LELRRRESGNHEFEYHVQSVRERLRYLENRQT 174 (412)
Q Consensus 143 ~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq 174 (412)
..|+.++..|+.|+.+|..|+++|......|.
T Consensus 13 ~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~ 44 (79)
T 3cvf_A 13 QKVQDLETRNAELEHQLRAMERSLEEARAERE 44 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344444444444444444444433333
No 34
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=68.88 E-value=9.7 Score=28.23 Aligned_cols=38 Identities=24% Similarity=0.278 Sum_probs=28.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
.++.+||.-+..|..+++.|+.++...++++..|..-|
T Consensus 11 ~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LL 48 (58)
T 3a2a_A 11 RQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLL 48 (58)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888888888888888877777777666555433
No 35
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=67.29 E-value=8.9 Score=28.37 Aligned_cols=26 Identities=31% Similarity=0.240 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhcc
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGN 152 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqq 152 (412)
++.+++.|..++..|..++..|+.+.
T Consensus 27 Le~~~~~L~~~n~~L~~~i~~L~~e~ 52 (61)
T 1t2k_D 27 LEKKAEDLSSLNGQLQSEVTLLRNEV 52 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445555555555555554444433
No 36
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=66.76 E-value=15 Score=31.16 Aligned_cols=42 Identities=19% Similarity=0.272 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
...+|..|++....|..||..++.++..|+..+..++.+...
T Consensus 36 ~k~Ei~elrr~iq~L~~el~~l~~~~~sLE~~l~e~e~~~~~ 77 (131)
T 3tnu_A 36 GKSEISELRRTMQNLEIELQSQLSMKASLENSLEETKGRYCM 77 (131)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 456777777777777777777777777777777777776543
No 37
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=65.99 E-value=23 Score=25.25 Aligned_cols=43 Identities=26% Similarity=0.343 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
.+++.+++|......|+..+.+|--++...+. .|++|+..+|.
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ssq~---KlKqRit~lE~ 44 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNATQM---KMKQRLSQLES 44 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHh
Confidence 36778888888888888888887665554443 35566655554
No 38
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=65.46 E-value=13 Score=37.43 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=30.6
Q ss_pred HHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 131 IERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 131 I~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
|+.|+.+...|..++..++++.+.++.++..+++++...+..-+++-+-|..
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~e 56 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQE 56 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444455555555555555556666777777777666666666655544
No 39
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=65.33 E-value=18 Score=28.21 Aligned_cols=37 Identities=19% Similarity=0.329 Sum_probs=18.5
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 142 QLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIA 178 (412)
Q Consensus 142 ~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mls 178 (412)
...|+.++..|+.|+.+|+.|+++|......|..+-.
T Consensus 6 ~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~ 42 (72)
T 3cve_A 6 HMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRS 42 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555555444444433
No 40
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=65.13 E-value=10 Score=24.59 Aligned_cols=24 Identities=29% Similarity=0.423 Sum_probs=12.9
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.+..||..||++...|.-|+..|+
T Consensus 6 alkqeiaalkkeiaalkfeiaalk 29 (33)
T 4dzn_A 6 ALKQEIAALKKEIAALKFEIAALK 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555544
No 41
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=65.10 E-value=8.3 Score=28.19 Aligned_cols=30 Identities=10% Similarity=0.163 Sum_probs=17.2
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhhc
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRESG 151 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~qq 151 (412)
.+...+..|++.||..+..|..++..++.+
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555566666666666666666555543
No 42
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=64.85 E-value=9.5 Score=29.77 Aligned_cols=52 Identities=23% Similarity=0.403 Sum_probs=38.6
Q ss_pred ChhhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 120 TETERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 120 t~~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
+..|...++.+|+.|+.-...+...|..++|+-..|++.+..++.||..++.
T Consensus 19 a~sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~qe 70 (72)
T 2xu6_A 19 TMSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLEE 70 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh
Confidence 3456777888999999999999999999999888888888888888765543
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=64.73 E-value=23 Score=36.45 Aligned_cols=36 Identities=11% Similarity=0.183 Sum_probs=18.1
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQ 160 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq 160 (412)
..+..++..++.+.+.+..++++++++.+....+.+
T Consensus 505 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (597)
T 3oja_B 505 DNLNKVFTHLKERQAFKLRETQARRTEADAKQKETE 540 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhhhhhcchh
Confidence 334555555555555555555555544433333333
No 44
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=64.22 E-value=8.1 Score=30.47 Aligned_cols=42 Identities=29% Similarity=0.386 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
..+..+++.|-.++..|..|+..+++-...++.++..|++.+
T Consensus 33 ~DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeEl 74 (77)
T 2w83_C 33 NDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEEL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666666666666665555555555555544443
No 45
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=63.46 E-value=13 Score=27.70 Aligned_cols=23 Identities=30% Similarity=0.414 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHh
Q 015162 127 FEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
++.+++.|+.++..|..++..|+
T Consensus 28 Le~~v~~L~~~n~~L~~ei~~L~ 50 (63)
T 2wt7_A 28 LQAETDQLEDEKSALQTEIANLL 50 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443
No 46
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=61.90 E-value=13 Score=27.95 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 127 FEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
+..+++.|+.++..|..++..|+.
T Consensus 28 le~~~~~L~~~N~~L~~~i~~L~~ 51 (63)
T 1ci6_A 28 LTGECKELEKKNEALKERADSLAK 51 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444433
No 47
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=61.14 E-value=13 Score=30.21 Aligned_cols=41 Identities=7% Similarity=0.084 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
..++..|..++..|..++..|++++..+..++..+++++..
T Consensus 47 ~~q~~~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~k~k~~~ 87 (90)
T 2wt7_B 47 VQQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKSEK 87 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888888888888888888888888888777653
No 48
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=60.46 E-value=36 Score=26.62 Aligned_cols=47 Identities=21% Similarity=0.314 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQ 175 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~ 175 (412)
.+++.+++|......|+..+.||--++...+. .|++||..+|.+-..
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy~ssQ~---KLKqRit~LE~~~~~ 50 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEYESMQQ---KLKQRLTKVEKFLKP 50 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcc
Confidence 46778888888888888888887766555443 356666666664433
No 49
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=57.43 E-value=42 Score=34.32 Aligned_cols=64 Identities=22% Similarity=0.274 Sum_probs=51.4
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRES---GNHEFEYHVQSVRERLRYLENRQTQMIACLANLLK 185 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~q---qqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq 185 (412)
.++..+..+++.|+.+++.+..++..++. +.+.+..++..|++++..++.....+-.-|..++-
T Consensus 38 ~~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (455)
T 2dq0_A 38 TEWRTKLKEINRLRHERNKIAVEIGKRRKKGEPVDELLAKSREIVKRIGELENEVEELKKKIDYYLW 104 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888999999999999999987653 35678888999999999998888888777766554
No 50
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=56.30 E-value=36 Score=24.51 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=21.7
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQSVR 163 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~ 163 (412)
..|.+||.-+..|...++.|+......++++..|+
T Consensus 4 q~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~ 38 (48)
T 3vmx_A 4 RQILRLKQINIQLATKIQHLEFSCSEKEQEIERLN 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 45677777777777777666665555555544443
No 51
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=55.74 E-value=28 Score=35.07 Aligned_cols=55 Identities=20% Similarity=0.228 Sum_probs=36.8
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIA 178 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mls 178 (412)
...++.+|+.|+++...|..++..++.+.+.+..++...+..-+.+++..+.|-.
T Consensus 5 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkg 59 (403)
T 4etp_A 5 IAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRG 59 (403)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3456677777777777777777777777777777766666655556665555543
No 52
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=55.17 E-value=45 Score=31.10 Aligned_cols=47 Identities=13% Similarity=0.015 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
..+..++..++.....+..++..++.+...++.++..++.|+...+.
T Consensus 35 ~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~ 81 (256)
T 3na7_A 35 DKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQK 81 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444555555554444433
No 53
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=55.06 E-value=47 Score=34.47 Aligned_cols=63 Identities=10% Similarity=0.138 Sum_probs=49.2
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRES---GNHEFEYHVQSVRERLRYLENRQTQMIACLANLL 184 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~q---qqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vl 184 (412)
.++..+..+++.|+.+++.+..++-.++. +.+.+..++..|++++..++.....+-.-|..++
T Consensus 40 ~~~r~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l 105 (485)
T 3qne_A 40 KEWVKLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKI 105 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667788999999999999988876653 3567888899999999988888877777665544
No 54
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=54.96 E-value=63 Score=29.48 Aligned_cols=23 Identities=9% Similarity=0.183 Sum_probs=8.6
Q ss_pred HHHHHHHhhccHHHHHHHHHHHH
Q 015162 142 QLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 142 ~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
..++..|+..+..+..++..|+.
T Consensus 94 q~el~~l~~~~~~l~~~ireLEq 116 (189)
T 2v71_A 94 EDDLSQTRAIKEQLHKYVRELEQ 116 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 55
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=54.55 E-value=31 Score=34.93 Aligned_cols=53 Identities=8% Similarity=0.139 Sum_probs=31.5
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
|+..|.+++..|++....|..++.++ ..++..++++|...+..-+++-+-|..
T Consensus 4 ~~~~l~~el~~~~~~~~~l~~~~~~~-------~~~~~~~~~~l~~~~~~rr~l~n~~~~ 56 (412)
T 3u06_A 4 MHAALSTEVVHLRQRTEELLRCNEQQ-------AAELETCKEQLFQSNMERKELHNTVMD 56 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667766666665555555554 445555566666555555666665544
No 56
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=54.53 E-value=73 Score=24.68 Aligned_cols=28 Identities=14% Similarity=0.247 Sum_probs=15.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccHHH
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNHEF 155 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq~l 155 (412)
...|..|..+++.|...+..++++.+.+
T Consensus 3 ~k~v~~l~~E~eel~~klk~~~ee~~~~ 30 (71)
T 1uix_A 3 TSDVANLANEKEELNNKLKEAQEQLSRL 30 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666665555544433
No 57
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=54.27 E-value=13 Score=29.74 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=24.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQSV 162 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L 162 (412)
+-|..|+.....|..++..|+++++.|..+++.|
T Consensus 52 ~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777777777777777777777777766655
No 58
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=54.01 E-value=19 Score=34.11 Aligned_cols=60 Identities=12% Similarity=0.133 Sum_probs=35.4
Q ss_pred HHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhh
Q 015162 133 RLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSA 192 (412)
Q Consensus 133 ~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq~p~f~~~ 192 (412)
.|++....+..+|.-|.=+...+..+|..+--++..++..++.++..|+.+=++-.|+..
T Consensus 153 ~Lkk~~~~i~~~LelL~IRK~ma~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~ 212 (242)
T 3uux_B 153 ALKSFSQTLVNSLEFLNIQKNSTLSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLED 212 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 455555555555555554555555666666666666666666666666666665555543
No 59
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=53.52 E-value=10 Score=29.59 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=20.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQS 161 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~ 161 (412)
+-|..|+..+..|..++..|++++..|..++..
T Consensus 47 ~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 47 EYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666666666665555543
No 60
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=52.77 E-value=43 Score=27.92 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=5.2
Q ss_pred HHHHHHHHHHHHHH
Q 015162 157 YHVQSVRERLRYLE 170 (412)
Q Consensus 157 ~qvq~L~erL~~~e 170 (412)
.++..|+..+..++
T Consensus 25 ~ei~eLk~~ve~lE 38 (106)
T 4e61_A 25 EEIEQYKGTVSTLE 38 (106)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 61
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=52.69 E-value=51 Score=34.22 Aligned_cols=96 Identities=14% Similarity=0.076 Sum_probs=61.2
Q ss_pred ccccccccccc-cccccccCCCCCCCCCCCCCChhhhhhHHHHHHHHHHHhHHHHHHHHHHhh-----------ccHHHH
Q 015162 89 EEFIRGQRHLL-KNIHRRKPVHSHSTQSPTPITETERNEFEAKIERLKKENSLLQLELRRRES-----------GNHEFE 156 (412)
Q Consensus 89 ~~F~Rg~~~lL-~~I~Rr~~~~s~~~~~~~~~t~~e~~~l~~eI~~LK~d~~~L~~EL~rL~q-----------qqq~l~ 156 (412)
-.|.|.+++.+ .++++|.-......-..-...+.++..+..+++.|+.+++.+..++..++. +.+.+.
T Consensus 43 ~~~ir~n~~~v~~~l~~R~~~~~~~~~~~~~~ld~~~r~~~~~~~~l~~~rn~~sk~i~~~~~~~~~~~~~~~~~~~~l~ 122 (501)
T 1wle_A 43 MESLCAYPEDAARALDLRKGELRSKDLPGIISTWQELRQLREQIRSLEEEKEAVTEAVRALVVNQDNSQVQQDPQYQSLR 122 (501)
T ss_dssp HHHHHHSHHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTGGGCHHHHHHH
T ss_pred HHHHHhCHHHHHHHHHHcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccccccccccHHHHH
Confidence 35667778876 566665421000000000001234667788899999999999988887653 234677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015162 157 YHVQSVRERLRYLENRQTQMIACLANLL 184 (412)
Q Consensus 157 ~qvq~L~erL~~~e~~Qq~mlsfL~~vl 184 (412)
.++..|++++..++.....+-.-|..++
T Consensus 123 ~~~~~l~~~i~~l~~~~~~~~~~l~~~l 150 (501)
T 1wle_A 123 ARGREIRKQLTLLYPKEAQLEEQFYLRA 150 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999888888877777665544
No 62
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=51.64 E-value=55 Score=22.85 Aligned_cols=39 Identities=18% Similarity=0.288 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRER 165 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~er 165 (412)
++.++..|..+++.|...-..-+.-...++.++..|+.+
T Consensus 8 lenevaslenenetlkkknlhkkdliaylekeianlrkk 46 (49)
T 3he5_A 8 LENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKK 46 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 344444444444444433222222233344444444443
No 63
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=51.16 E-value=53 Score=26.82 Aligned_cols=77 Identities=8% Similarity=0.136 Sum_probs=44.8
Q ss_pred CChhhhhhHHHHHHHHHHHhHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhhhhh
Q 015162 119 ITETERNEFEAKIERLKKENSLLQLELRRRESGN-HEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALNQQA 197 (412)
Q Consensus 119 ~t~~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqq-q~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq~p~f~~~L~q~~ 197 (412)
+++.....+..+|+.++.....|..-|..+.-.. .... ...+.+-+..|+.-|.+|+.++.. ..+...+..+++-+
T Consensus 3 ~~~eq~~k~~~el~~v~~n~~lL~EML~~~~p~~~~~~~--~el~~eL~~~c~~~qp~i~~li~~-~~dee~l~~lL~~N 79 (103)
T 1wrd_A 3 LGSEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPAD--LELLQELNRTCRAMQQRVLELIPQ-IANEQLTEELLIVN 79 (103)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCCHHH--HHHHHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccc--HHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHhh
Confidence 4445556678889988876666655565543211 1122 233444555566666666666664 46666776777655
Q ss_pred h
Q 015162 198 E 198 (412)
Q Consensus 198 ~ 198 (412)
|
T Consensus 80 D 80 (103)
T 1wrd_A 80 D 80 (103)
T ss_dssp H
T ss_pred H
Confidence 4
No 64
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=51.06 E-value=28 Score=24.23 Aligned_cols=10 Identities=30% Similarity=0.660 Sum_probs=5.1
Q ss_pred HHHHHHHHHH
Q 015162 127 FEAKIERLKK 136 (412)
Q Consensus 127 l~~eI~~LK~ 136 (412)
+..+++.||+
T Consensus 5 lkselqalkk 14 (48)
T 1g6u_A 5 LKSELQALKK 14 (48)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3445555554
No 65
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=50.99 E-value=72 Score=29.68 Aligned_cols=50 Identities=12% Similarity=0.131 Sum_probs=34.3
Q ss_pred hhhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 121 ETERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 121 ~~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
..|...+..+|+.+++.+..|..++..+..+...+...+..+.+++...+
T Consensus 89 ~kE~~aL~kEie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~ 138 (256)
T 3na7_A 89 ERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELE 138 (256)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777788888888877777777777766666666666665555444
No 66
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=50.84 E-value=85 Score=24.32 Aligned_cols=60 Identities=18% Similarity=0.289 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHH-HHH----HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEY-HVQ----SVRERLRYLENRQTQMIACLANLLKK 186 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~-qvq----~L~erL~~~e~~Qq~mlsfL~~vlq~ 186 (412)
+...|..|..++..|...+..++++.+.+.. ++. .++..|..=.--=++-++.|+.||..
T Consensus 4 L~k~i~~l~~E~eel~~klk~~~ee~~~~~eee~~~~~~~lek~L~~E~~LK~QAVNKLAEIMNR 68 (71)
T 1s1c_X 4 LTKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKLAEIMNR 68 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4556666777777776666666655444432 233 33333332222223456666665543
No 67
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=50.63 E-value=9.9 Score=28.26 Aligned_cols=25 Identities=28% Similarity=0.282 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhc
Q 015162 127 FEAKIERLKKENSLLQLELRRRESG 151 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qq 151 (412)
++.+++.|..++..|..++..|+.+
T Consensus 27 Le~~v~~L~~~n~~L~~~v~~L~~e 51 (62)
T 1jnm_A 27 LEEKVKTLKAQNSELASTANMLREQ 51 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555444443
No 68
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=50.34 E-value=20 Score=28.83 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=20.5
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 138 NSLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 138 ~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
...+..++..|+++|..|..+|..|+..+..+
T Consensus 38 ~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~L 69 (87)
T 1hjb_A 38 NLETQHKVLELTAENERLQKKVEQLSRELSTL 69 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566666677777777777777666655533
No 69
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=50.19 E-value=76 Score=25.10 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=16.6
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 145 LRRRESGNHEFEYHVQSVRERLRYLENRQTQMIA 178 (412)
Q Consensus 145 L~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mls 178 (412)
+..|.++...+..+|..|+-.+........+|..
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~ 55 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVE 55 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 3344445555555555555555544444444433
No 70
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=50.11 E-value=21 Score=24.14 Aligned_cols=25 Identities=28% Similarity=0.356 Sum_probs=18.5
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
.+++.++.|...+..|..|+.||+.
T Consensus 5 QLE~KVEeLl~~~~~Le~eV~RLk~ 29 (36)
T 1kd8_B 5 QLKAKVEELKSKLWHLKNKVARLKK 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4677777787777777777777664
No 71
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=49.87 E-value=78 Score=26.52 Aligned_cols=52 Identities=19% Similarity=0.226 Sum_probs=34.9
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQ 175 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~ 175 (412)
...|+.+|..|+..+..|...|..|.|.|-.++.+-.....-|..++.+-.+
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~ 88 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQ 88 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHH
Confidence 3456777777777777777778777777777777655555555555544333
No 72
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=49.39 E-value=36 Score=33.49 Aligned_cols=12 Identities=25% Similarity=0.476 Sum_probs=7.2
Q ss_pred chhhhhhccccc
Q 015162 256 FWTFFLCGIGEA 267 (412)
Q Consensus 256 ~~e~~l~~~~~~ 267 (412)
.|+.|-.+-|+.
T Consensus 129 ~W~~Yk~GFG~~ 140 (323)
T 1lwu_C 129 DWVSYREGFGYL 140 (323)
T ss_dssp CHHHHHHCEEEE
T ss_pred CHHHHhhhhCCc
Confidence 466666666554
No 73
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=48.61 E-value=24 Score=29.90 Aligned_cols=23 Identities=9% Similarity=0.147 Sum_probs=9.4
Q ss_pred HHHHHhhccHHHHHHHHHHHHHH
Q 015162 144 ELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 144 EL~rL~qqqq~l~~qvq~L~erL 166 (412)
++++|+.+...|.++++.....+
T Consensus 72 ~vqeLqgEI~~Lnq~Lq~a~ae~ 94 (121)
T 3mq7_A 72 KVEELEGEITTLNHKLQDASAEV 94 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443333
No 74
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=48.47 E-value=59 Score=30.51 Aligned_cols=49 Identities=14% Similarity=0.227 Sum_probs=39.4
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENR 172 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~ 172 (412)
+.-+...+..+|.++..|..+|++.+.+...+..++...++.+.....+
T Consensus 166 k~yLa~R~~~lK~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~ 214 (228)
T 3q0x_A 166 KQFLAFRLSEVKGTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQ 214 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778999999999999999999988888888888888776655443
No 75
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=47.95 E-value=41 Score=33.97 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=25.7
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQ 175 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~ 175 (412)
+...|..||..++++...+..+++.+...+..++++..+
T Consensus 4 ~~~~l~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 42 (412)
T 3u06_A 4 MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQ 42 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667777777777777777777777776666554333
No 76
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=47.36 E-value=11 Score=23.51 Aligned_cols=15 Identities=40% Similarity=0.609 Sum_probs=6.3
Q ss_pred HHHHHHhHHHHHHHH
Q 015162 132 ERLKKENSLLQLELR 146 (412)
Q Consensus 132 ~~LK~d~~~L~~EL~ 146 (412)
.+||+.+..|.+|+.
T Consensus 3 rrlkqknarlkqeia 17 (28)
T 3ra3_B 3 RRLKQKNARLKQEIA 17 (28)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred hHHHHhhhHHHHHHH
Confidence 344444444444333
No 77
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=46.99 E-value=26 Score=23.31 Aligned_cols=25 Identities=36% Similarity=0.428 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
.++++++.|-.++..|..|+.||+.
T Consensus 4 QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 4 QLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4677888888888888888887763
No 78
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=45.33 E-value=31 Score=22.29 Aligned_cols=28 Identities=21% Similarity=0.445 Sum_probs=16.8
Q ss_pred HHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
||..||++...|..|+..| ..++..|++
T Consensus 3 eiaalkqeiaalkkeiaal-------kfeiaalkq 30 (33)
T 4dzn_A 3 EIAALKQEIAALKKEIAAL-------KFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHH-------HHHHHHHHc
Confidence 5667777666666666554 445555543
No 79
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=45.08 E-value=46 Score=23.27 Aligned_cols=28 Identities=25% Similarity=0.381 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHE 154 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~ 154 (412)
++.+...|...+..|...+..|+.+++.
T Consensus 8 LE~r~k~le~~naeLEervstLq~EN~m 35 (42)
T 2oqq_A 8 LENRVKDLENKNSELEERLSTLQNENQM 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 3444444444444455555444444433
No 80
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=44.95 E-value=63 Score=29.96 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=22.1
Q ss_pred HHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
+++.|+.....|..++..++.++..+..++..+++|..
T Consensus 60 e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~ 97 (213)
T 4ani_A 60 ELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTR 97 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555666666666654
No 81
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=44.61 E-value=30 Score=26.67 Aligned_cols=7 Identities=14% Similarity=0.278 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 015162 157 YHVQSVR 163 (412)
Q Consensus 157 ~qvq~L~ 163 (412)
.+...|+
T Consensus 50 ~en~~Lr 56 (70)
T 1gd2_E 50 LENDQLR 56 (70)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 3333333
No 82
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=43.46 E-value=42 Score=30.66 Aligned_cols=38 Identities=16% Similarity=0.325 Sum_probs=22.0
Q ss_pred HHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
-|..|..++..|..+|....++...++.|++.+++...
T Consensus 21 LV~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~ 58 (190)
T 4emc_A 21 LVANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVK 58 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 45555566666666666555555555556666555543
No 83
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=43.45 E-value=13 Score=23.26 Aligned_cols=18 Identities=11% Similarity=0.217 Sum_probs=8.1
Q ss_pred HHhhccHHHHHHHHHHHH
Q 015162 147 RRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 147 rL~qqqq~l~~qvq~L~e 164 (412)
+|+|++..+.+++..|+=
T Consensus 4 rlkqknarlkqeiaaley 21 (28)
T 3ra3_B 4 RLKQKNARLKQEIAALEY 21 (28)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHH
Confidence 344444444444444443
No 84
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=43.04 E-value=22 Score=27.90 Aligned_cols=32 Identities=6% Similarity=0.215 Sum_probs=19.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQ 160 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq 160 (412)
+=|..|+.+...|..|...|+.++..|..++.
T Consensus 47 ~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 47 LHIKKLEDSDRKAVHQIDQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34666666666666666666666555555543
No 85
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=42.49 E-value=35 Score=26.67 Aligned_cols=42 Identities=12% Similarity=0.059 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
++..+.-...-...|...|.+.+++...++.++..|.+|+..
T Consensus 19 LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~ 60 (78)
T 3efg_A 19 LETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGK 60 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444554444444444445544444443
No 86
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=42.23 E-value=59 Score=29.72 Aligned_cols=44 Identities=7% Similarity=0.066 Sum_probs=30.0
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
...+..|+..|..+......|+..|+.+.+.++.++.....++.
T Consensus 22 V~~L~~En~~L~~ql~~k~~ei~~L~~ql~sl~~~~~~~~~~~~ 65 (190)
T 4emc_A 22 VANLVNENFVLSEKLDTKATEIKQLQKQIDSLNAQVKELKTQTS 65 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 45566677777777777777777777777777777766666554
No 87
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=42.11 E-value=48 Score=32.64 Aligned_cols=35 Identities=6% Similarity=-0.024 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQ 160 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq 160 (412)
.|.++|.+|.........++..|+.+...++.+|+
T Consensus 9 ~~~~~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~ 43 (323)
T 1lwu_C 9 KILEEVRILEQIGVSHDAQIQELSEMWRVNQQFVT 43 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Confidence 34445555444444444444444433333333333
No 88
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=42.07 E-value=35 Score=22.68 Aligned_cols=24 Identities=17% Similarity=0.230 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.++++++.|=.++..|..|+.||+
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk 27 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIK 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHH
Confidence 466777777777777777777765
No 89
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=41.20 E-value=57 Score=26.13 Aligned_cols=23 Identities=26% Similarity=0.309 Sum_probs=10.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhh
Q 015162 128 EAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
..++..|..++..|..+|..|+.
T Consensus 42 ~~r~~~Le~EN~~Lr~~v~~L~~ 64 (87)
T 1hjb_A 42 QHKVLELTAENERLQKKVEQLSR 64 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444433
No 90
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=40.12 E-value=1.2e+02 Score=26.84 Aligned_cols=69 Identities=14% Similarity=0.057 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCchhhhhhhh
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLK-KPGFSSALNQQ 196 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq-~p~f~~~L~q~ 196 (412)
...|..|+.+...|..++..+......-..-++.+.+.+....-+-..+-..+.++-. +...+.++|++
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~r 136 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKK 136 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466667777777776666666554444444555555444444444444444444333 22334445543
No 91
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=39.61 E-value=47 Score=33.55 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRR-RESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLL 184 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~r-L~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vl 184 (412)
++..+..+++.|+.+++.+..++.. -.++.+.+..++..+++++..++.....+-.-|..++
T Consensus 36 ~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (421)
T 1ses_A 36 EVQELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEALL 98 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777888888888888877753 1123456677888888888888877777776666533
No 92
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=38.79 E-value=90 Score=31.25 Aligned_cols=25 Identities=8% Similarity=0.032 Sum_probs=9.1
Q ss_pred HHhHHHHHHHHHHhhccHHHHHHHH
Q 015162 136 KENSLLQLELRRRESGNHEFEYHVQ 160 (412)
Q Consensus 136 ~d~~~L~~EL~rL~qqqq~l~~qvq 160 (412)
++...+..++++++++++.++..+.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (487)
T 3oja_A 435 RDWDMYQHKETQLAEENARLKKLNG 459 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhhhhh
Confidence 3333333333333333333333333
No 93
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=38.77 E-value=63 Score=24.29 Aligned_cols=36 Identities=14% Similarity=0.193 Sum_probs=15.8
Q ss_pred HHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 134 LKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 134 LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
+|+-..+-.++++.|-+-+.++..++..|...|+.+
T Consensus 18 vK~ALaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~L 53 (63)
T 2w6a_A 18 LKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKL 53 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444433
No 94
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=38.33 E-value=87 Score=31.59 Aligned_cols=42 Identities=7% Similarity=0.130 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
..|+..|..||+....-...|..|+....++..+|+.|+-.+
T Consensus 116 ~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~I 157 (390)
T 1deq_A 116 EDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDI 157 (390)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346667777777766655577777777666667777776654
No 95
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=38.21 E-value=28 Score=23.34 Aligned_cols=23 Identities=30% Similarity=0.554 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRR 148 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL 148 (412)
....+|+.||+.+..|..++..|
T Consensus 11 a~qqDIddlkrQN~~Le~Qir~l 33 (34)
T 1a93_B 11 THQQDIDDLKRQNALLEQQVRAL 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhHhhHHHHHHHHHHHHHHHHhc
Confidence 34678899999998888887654
No 96
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=38.19 E-value=63 Score=30.57 Aligned_cols=44 Identities=18% Similarity=0.382 Sum_probs=23.7
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
..++.+|+.|+.-+..+...|..++++--.|+..+..+++|+..
T Consensus 180 ~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief 223 (242)
T 3uux_B 180 RDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDF 223 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 34444555555555555555555555555555555555555443
No 97
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=38.08 E-value=73 Score=23.08 Aligned_cols=36 Identities=25% Similarity=0.297 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQS 161 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~ 161 (412)
.+..++..|...|..|..-|.+.+++...|..+|..
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~ 48 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALREEVDR 48 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666666666555555444443
No 98
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=38.04 E-value=1.4e+02 Score=23.05 Aligned_cols=15 Identities=20% Similarity=0.213 Sum_probs=6.1
Q ss_pred HHHHHHHHHHhHHHH
Q 015162 128 EAKIERLKKENSLLQ 142 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~ 142 (412)
...|..|+.+.....
T Consensus 5 kkKm~~lk~e~d~a~ 19 (81)
T 1ic2_A 5 KKKMQMLKLDKENAL 19 (81)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444443333
No 99
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=38.01 E-value=77 Score=24.45 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
.+...+..|+.+...+..++..++++..-....+..++-..+
T Consensus 6 aiKkkmqaLk~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q 47 (75)
T 3mtu_A 6 AIKKKMQMLKLDKENALDRAEQAEADKDFYFGKLRNIELICQ 47 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 345556666666666666666666543333334444444433
No 100
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=37.81 E-value=65 Score=23.82 Aligned_cols=31 Identities=13% Similarity=0.143 Sum_probs=20.3
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
....|..++..|..++..|..++..|++.+.
T Consensus 24 ~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~ 54 (63)
T 2wt7_A 24 LTDTLQAETDQLEDEKSALQTEIANLLKEKE 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777777777777766666544
No 101
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=37.80 E-value=46 Score=22.21 Aligned_cols=24 Identities=21% Similarity=0.185 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.++++++.|=.++..|..|+.||+
T Consensus 5 QLEdKVEeLl~~~~~Le~EV~RLk 28 (34)
T 3c3f_A 5 QIEXKLEXILSXLYHXENEXARIX 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHH
Confidence 466777777777777777777765
No 102
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=37.62 E-value=45 Score=22.15 Aligned_cols=24 Identities=25% Similarity=0.206 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.++++++.|-..+..|..|+.||+
T Consensus 4 QLEdKVEell~~~~~le~EV~Rl~ 27 (33)
T 2wq1_A 4 QLEDKIEENTSKIYHNTNEIARNT 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 467777777777777777777765
No 103
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=37.28 E-value=1.8e+02 Score=24.09 Aligned_cols=41 Identities=17% Similarity=0.195 Sum_probs=22.0
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHH
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVR 163 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~ 163 (412)
|+..+.-+|+-||...+.+...+..++++...-..++..++
T Consensus 24 EKsal~YqVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~K 64 (103)
T 4h22_A 24 EKTNFMYQVDTLKDMLLELEEQLAESRRQYEEKNKEFEREK 64 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556666666666666666555555554444444333
No 104
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=37.11 E-value=45 Score=22.28 Aligned_cols=25 Identities=24% Similarity=0.215 Sum_probs=18.4
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
.++++++.|=..+..|..|+.||+.
T Consensus 5 QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 5 QIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4677777777777778888777763
No 105
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=37.10 E-value=81 Score=25.31 Aligned_cols=41 Identities=12% Similarity=0.278 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
..+-+..|+.....+..++.+|..+...+..++..++..|+
T Consensus 68 ~~ea~~~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~ 108 (117)
T 2zqm_A 68 KDKAVAELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQ 108 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566666667777777777666666666666666555
No 106
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=37.01 E-value=1.8e+02 Score=24.26 Aligned_cols=51 Identities=10% Similarity=0.105 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIAC 179 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsf 179 (412)
.+.+++.++..+...|...+. +..+....+|+.|.++++..|+.-+.|-.-
T Consensus 17 ql~~qL~k~~~~r~~Le~~w~---~k~E~~k~qV~~L~~~~q~sE~~L~~Lqq~ 67 (112)
T 1x79_B 17 QANDQLEKTMKDKQELEDFIK---QSSEDSSHQISALVLRAQASEILLEELQQG 67 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555533 355667778888888887776554444433
No 107
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=36.87 E-value=54 Score=26.34 Aligned_cols=57 Identities=18% Similarity=0.265 Sum_probs=39.1
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNH-----EFEYHVQSVRERLRYLENRQTQMIACL 180 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq-----~l~~qvq~L~erL~~~e~~Qq~mlsfL 180 (412)
..++.+.+..|..++..|..++..++++.. ..+.+|..|+..|..+...-.++..-+
T Consensus 18 lAsyIdKVR~LEqqN~~Le~~i~~l~~~~~~~~~~~ye~~i~~Lr~~i~~~~~ek~~l~~e~ 79 (93)
T 3s4r_A 18 FANLIDKVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVER 79 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356788888999999999998888776422 245677777777766655544444433
No 108
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=36.45 E-value=1.9e+02 Score=24.36 Aligned_cols=26 Identities=31% Similarity=0.364 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccH
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNH 153 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq 153 (412)
+..|+.|+++...|..+|.+++.+.+
T Consensus 14 D~~Ie~Lkreie~lk~ele~l~~E~q 39 (120)
T 3i00_A 14 DHLIERLYREISGLKAQLENMKTESQ 39 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888888888888766544
No 109
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=36.03 E-value=73 Score=21.52 Aligned_cols=25 Identities=32% Similarity=0.428 Sum_probs=17.5
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
.++++++.|-.++..|..|+.||+.
T Consensus 5 QLE~kVEeLl~~~~~Le~EV~RL~~ 29 (36)
T 1kd8_A 5 QLEAEVEEIESEVWHLENEVARLEK 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4667777777777777777777654
No 110
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=35.80 E-value=49 Score=22.09 Aligned_cols=24 Identities=29% Similarity=0.458 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.+++.++.|-.++..|..|+.+|+
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk 28 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLK 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHH
Confidence 466777777777777777777765
No 111
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=35.65 E-value=40 Score=25.24 Aligned_cols=29 Identities=17% Similarity=0.149 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 138 NSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 138 ~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
...|..++..|+.++..|..++..|++.|
T Consensus 32 ~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 32 MKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555543
No 112
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=35.53 E-value=63 Score=21.83 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=23.8
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 139 SLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 139 ~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
++|..++..|-..+..|+.++..|++-+..+
T Consensus 4 nQLE~kVEeLl~~~~~Le~EV~RL~~ll~~~ 34 (36)
T 1kd8_A 4 KQLEAEVEEIESEVWHLENEVARLEKENAEC 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHhccc
Confidence 4577778888888888888888888766544
No 113
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=35.39 E-value=1.2e+02 Score=21.73 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=29.0
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 142 QLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACL 180 (412)
Q Consensus 142 ~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL 180 (412)
..+|.+|++-+..+-++++.|++.-..+++....+-.+|
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LL 41 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLL 41 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 356888999999998999999888777776655544443
No 114
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=35.10 E-value=1.8e+02 Score=24.31 Aligned_cols=27 Identities=19% Similarity=0.126 Sum_probs=10.7
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
|+..+.+..-....+.+.|..++..|+
T Consensus 5 e~~~~~~~~~~~e~e~~~l~~~~~el~ 31 (125)
T 1joc_A 5 ERRALLERCLKGEGEIEKLQTKVLELQ 31 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 333333333333334444444444443
No 115
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=34.38 E-value=87 Score=27.74 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=18.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQ 160 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq 160 (412)
.+++.|+.++..+...+.+-+++.+.|..|..
T Consensus 5 qe~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~v 36 (155)
T 2aze_A 5 QECQNLEVERQRRLERIKQKQSQLQELILQQI 36 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667777766666666655544444444433
No 116
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=34.21 E-value=54 Score=21.92 Aligned_cols=25 Identities=24% Similarity=0.326 Sum_probs=18.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~q 150 (412)
.++++++.|=..+..|..|+.||+.
T Consensus 5 QLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 5 QIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHH
Confidence 4677788877788888888877763
No 117
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=34.08 E-value=1.5e+02 Score=25.18 Aligned_cols=19 Identities=16% Similarity=0.092 Sum_probs=6.9
Q ss_pred HHHHHHHHhhccHHHHHHH
Q 015162 141 LQLELRRRESGNHEFEYHV 159 (412)
Q Consensus 141 L~~EL~rL~qqqq~l~~qv 159 (412)
|..|+..|.++.+....++
T Consensus 76 LqgEI~~Lnq~Lq~a~ae~ 94 (121)
T 3mq7_A 76 LEGEITTLNHKLQDASAEV 94 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 118
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=34.08 E-value=1.3e+02 Score=30.00 Aligned_cols=24 Identities=8% Similarity=-0.056 Sum_probs=9.7
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHH
Q 015162 141 LQLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 141 L~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
++.|..++++....+..+++.+++
T Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~ 449 (487)
T 3oja_A 426 QQSVQNNAIRDWDMYQHKETQLAE 449 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcchhhhhhhhhHHHHHHH
Confidence 333333333444444444444444
No 119
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=34.01 E-value=66 Score=20.86 Aligned_cols=19 Identities=37% Similarity=0.496 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 015162 153 HEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 153 q~l~~qvq~L~erL~~~e~ 171 (412)
..++.-+|.|.+|+...|.
T Consensus 9 r~l~~ivq~lq~r~drle~ 27 (32)
T 2akf_A 9 RNLNAIVQKLQERLDRLEE 27 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555544
No 120
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=33.96 E-value=1.2e+02 Score=22.16 Aligned_cols=33 Identities=18% Similarity=0.103 Sum_probs=21.8
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
....|..++..|..++..|..++..|++.+..+
T Consensus 23 ~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 23 WVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566667777777777777777777665544
No 121
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=33.67 E-value=56 Score=21.82 Aligned_cols=24 Identities=21% Similarity=0.256 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.+++.++.|-..+..|..|+.||+
T Consensus 5 QLEdkVEeLl~~~~~Le~eV~RL~ 28 (34)
T 2hy6_A 5 QLADAVEELASANYHLANAVARLA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 466777777777777777777765
No 122
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=33.64 E-value=1.2e+02 Score=22.44 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=28.0
Q ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 015162 142 QLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPG 188 (412)
Q Consensus 142 ~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq~p~ 188 (412)
..++.+|+|.+..|-.+++.|+..-..+|+.. ..|.+++++-|
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEi----eRL~~LLkqHg 52 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEI----ERLNKLLRQHG 52 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHcC
Confidence 35688899988888889998877655444443 34455554444
No 123
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=33.56 E-value=1.5e+02 Score=23.58 Aligned_cols=30 Identities=7% Similarity=0.175 Sum_probs=16.2
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 140 LLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 140 ~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
.|..||...+++...++.++...+.+|..+
T Consensus 48 kl~~el~~h~~ei~~le~~i~rhk~~i~~l 77 (84)
T 1gmj_A 48 HKENEISHHAKEIERLQKEIERHKQSIKKL 77 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345556555555555555555555555444
No 124
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=33.17 E-value=43 Score=33.82 Aligned_cols=62 Identities=24% Similarity=0.370 Sum_probs=43.5
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRES---GNHEFEYHVQSVRERLRYLENRQTQMIACLANLL 184 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~q---qqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vl 184 (412)
++..+..+++.|+.+++.+..++..++. +.+.+..++..+++++..++.....+-.-|..++
T Consensus 38 ~~r~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (425)
T 2dq3_A 38 RRREIIKRLEALRSERNKLSKEIGKLKREGKDTTEIQNRVKELKEEIDRLEEELRKVEEELKNTL 102 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTGGGSSCSCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666778888888888888888876533 2345566777777777777777766666555533
No 125
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=32.82 E-value=2.1e+02 Score=23.78 Aligned_cols=51 Identities=14% Similarity=0.124 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMI 177 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~ml 177 (412)
+..++...+.+...|..++..|+...+.++.+=-.-=.+|+..|--.|.+.
T Consensus 9 l~~eL~~~~~ei~~L~~ei~eLk~~ve~lEkERDFYF~KLRdIEiLcQe~~ 59 (106)
T 4e61_A 9 IQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQ 59 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555544444444332222234555554444443
No 126
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=32.68 E-value=1e+02 Score=23.99 Aligned_cols=38 Identities=16% Similarity=0.126 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRE 164 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~e 164 (412)
++..|..|.-...-+..-|..|.+....-+.+|..|+.
T Consensus 12 le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ 49 (78)
T 3efg_A 12 LEARLVELETRLSFQEQALTELSEALADARLTGARNAE 49 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555444444444444444333333333333333
No 127
>1bg1_A Protein (transcription factor STAT3B); protein-DNA complex, cytokine activation, complex (transcription factor/DNA), transcription/DNA complex; HET: DNA PTR; 2.25A {Mus musculus} SCOP: a.47.1.1 b.2.5.5 d.93.1.1 PDB: 3cwg_A
Probab=32.58 E-value=67 Score=34.22 Aligned_cols=38 Identities=13% Similarity=0.345 Sum_probs=29.0
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHH
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHV 159 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qv 159 (412)
.....++..++.|+.....+..+++.|++.|..+..+-
T Consensus 13 ~k~~ei~~~v~~lr~~~q~~e~~ik~Le~~Qe~f~~~y 50 (596)
T 1bg1_A 13 EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNY 50 (596)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 34556788888888888888888888888877655443
No 128
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=32.16 E-value=1.5e+02 Score=30.56 Aligned_cols=63 Identities=10% Similarity=0.067 Sum_probs=43.2
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhh---------------------------ccHHH----HHH-HHHHHHHHHHH
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRES---------------------------GNHEF----EYH-VQSVRERLRYL 169 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~q---------------------------qqq~l----~~q-vq~L~erL~~~ 169 (412)
.++..+..+++.|+.+++.+..++-.++. +.+.+ ..+ +..|++++..+
T Consensus 44 ~~~r~~~~~~~~l~~~rN~~sk~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~i~~l 123 (484)
T 3lss_A 44 KKWRRTQFLTEASKKLINICSKAVGAKKKAKEADGDTSEIPPQVKEAYENGTLKGEQVEQLCVLQLKQLSKDLSDQVAGL 123 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC----------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccchhhHHHhhHHHHHHHHHHHHHHHHHH
Confidence 35667788889999999988888866554 12334 455 77888888888
Q ss_pred HHHHHHHHHHHHHHh
Q 015162 170 ENRQTQMIACLANLL 184 (412)
Q Consensus 170 e~~Qq~mlsfL~~vl 184 (412)
+.....+-.-|..++
T Consensus 124 e~~~~~~~~~~~~~l 138 (484)
T 3lss_A 124 AKEAQQLEEERDKLM 138 (484)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 877777776665544
No 129
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=31.53 E-value=1.4e+02 Score=34.00 Aligned_cols=6 Identities=33% Similarity=0.756 Sum_probs=2.4
Q ss_pred HHHHHH
Q 015162 130 KIERLK 135 (412)
Q Consensus 130 eI~~LK 135 (412)
|+..|+
T Consensus 961 e~~~L~ 966 (1080)
T 2dfs_A 961 ETEKLR 966 (1080)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 344443
No 130
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=31.49 E-value=51 Score=23.98 Aligned_cols=26 Identities=12% Similarity=0.125 Sum_probs=12.3
Q ss_pred hHHHHHHHHHHhhccHHHHHHHHHHH
Q 015162 138 NSLLQLELRRRESGNHEFEYHVQSVR 163 (412)
Q Consensus 138 ~~~L~~EL~rL~qqqq~l~~qvq~L~ 163 (412)
...|..++..|+.++..|..++..|.
T Consensus 24 ~~~LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 24 VKSLENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444
No 131
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=31.42 E-value=32 Score=33.80 Aligned_cols=13 Identities=23% Similarity=0.560 Sum_probs=8.2
Q ss_pred cchhhhhhccccc
Q 015162 255 DFWTFFLCGIGEA 267 (412)
Q Consensus 255 ~~~e~~l~~~~~~ 267 (412)
-.|+.|-.+-|+.
T Consensus 119 R~W~~Yk~GFG~~ 131 (319)
T 1fzc_C 119 KNWIQYKEGFGHL 131 (319)
T ss_dssp CCHHHHHHCEEEE
T ss_pred cCHHHHhHhhCCc
Confidence 3477777766654
No 132
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=30.97 E-value=1.5e+02 Score=21.95 Aligned_cols=31 Identities=19% Similarity=0.261 Sum_probs=19.7
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
....|..++..|++++..|..++..|+..+.
T Consensus 24 ~~~~le~~~~~L~~~N~~L~~~i~~L~~E~~ 54 (63)
T 1ci6_A 24 EQEALTGECKELEKKNEALKERADSLAKEIQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666666666666666666666666544
No 133
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=30.94 E-value=1.6e+02 Score=25.57 Aligned_cols=38 Identities=18% Similarity=0.268 Sum_probs=19.9
Q ss_pred HHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
.++.|++.+..-+.||.+|+-+...++..+......|.
T Consensus 47 KVDQlqKRn~~HQKEi~~Lrae~~~~QRn~~K~~~~Lk 84 (167)
T 4gkw_A 47 KVDQLQKRNVAHQKEIGKLRAELGTAQRNLEKADQLLK 84 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhccHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 44555555555555566655555555554444444443
No 134
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=30.65 E-value=59 Score=24.26 Aligned_cols=26 Identities=31% Similarity=0.353 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhc
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESG 151 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qq 151 (412)
.|+.+++.|+.++..|..++..|+++
T Consensus 34 ~Le~~v~~L~~eN~~L~~ev~~Lr~~ 59 (63)
T 2dgc_A 34 QLEDKVEELLSKNYHLENEVARLKKL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677777777777777666654
No 135
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=30.33 E-value=1e+02 Score=20.79 Aligned_cols=30 Identities=10% Similarity=0.122 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHH
Q 015162 139 SLLQLELRRRESGNHEFEYHVQSVRERLRY 168 (412)
Q Consensus 139 ~~L~~EL~rL~qqqq~l~~qvq~L~erL~~ 168 (412)
++|...+..|...+..|+.++..|++-+..
T Consensus 4 nQLE~KVEeLl~~~~~Le~eV~RLk~ll~~ 33 (36)
T 1kd8_B 4 KQLKAKVEELKSKLWHLKNKVARLKKKNAE 33 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 356667777777778888888888876653
No 136
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=30.31 E-value=34 Score=31.17 Aligned_cols=61 Identities=16% Similarity=0.283 Sum_probs=46.2
Q ss_pred chH-HHHHHhhcCCCCCCceEEcCCCCeEEE-eCCchhhhhc-ccccc-CCCCchhhhhc-----cccccc
Q 015162 15 PFL-IKTYEMVDDPLTNSLVSWSQSGGSFIV-WNPPDFAKDL-LPLYF-KHNNFSSFVRQ-----LNTYGF 76 (412)
Q Consensus 15 ~Fl-~KLy~mv~d~~~~~iI~W~~~G~sFiI-~d~~~F~~~v-Lp~~F-kh~nfsSFvRQ-----LN~YGF 76 (412)
.|+ +.+|.++=.-. .+...|+++++.|+| .|..-|..-| +|+.. ..-+|+.|+.= |.+-||
T Consensus 88 ~fI~k~~Wk~lfgk~-~d~L~~t~~~~~y~L~~d~nPl~~fv~lP~~~~~~l~y~~f~cGIIrGaL~~~g~ 157 (193)
T 3cue_D 88 EVLSKCAFKIFLNIT-PNITNWSHNKDTFSLILDENPLADFVELPMDAMKSLWYSNILCGVLKGSLEMVQL 157 (193)
T ss_dssp HHHHHHHHHHHSSCC-CCCBCCCTTSCCCBCCBSCCGGGSSCCCCTTTTTSCCTTHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhCCC-CccceecCCCCEEEEEECCchhhhheeCcHhHHhCcchhhhHHHHHHHHHHhCCC
Confidence 577 45888887754 456889999999999 7776655544 78776 66789999853 888899
No 137
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=30.10 E-value=1.4e+02 Score=21.65 Aligned_cols=41 Identities=5% Similarity=0.026 Sum_probs=21.0
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
.|..++..|..+...|..++..++.+.+..+.+-..-.+||
T Consensus 8 ~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~Rl 48 (52)
T 1jcd_A 8 QASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455555555555555555555554444444444444444
No 138
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=30.02 E-value=34 Score=26.88 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 139 SLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 139 ~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
..+..++..|+++|..|..+|..|+..+.
T Consensus 39 ~e~~~r~~~L~~eN~~L~~~v~~L~~E~~ 67 (78)
T 1gu4_A 39 LETQHKVLELTAENERLQKKVEQLSRELS 67 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566666666666666666655544
No 139
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=29.94 E-value=1.3e+02 Score=24.85 Aligned_cols=41 Identities=15% Similarity=0.232 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
+++-++-|++....|...+..++.+...+..++..+.+.|+
T Consensus 86 ~~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~ 126 (133)
T 1fxk_C 86 FEDAMESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAE 126 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666666666666665555566666665554
No 140
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=29.42 E-value=72 Score=21.30 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=16.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHh
Q 015162 126 EFEAKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.++++++.|-.++..|..|+.||+
T Consensus 5 QledKvEel~~~~~~l~nEv~Rl~ 28 (34)
T 2r2v_A 5 QVADKLEEVASKLYHNANELARVA 28 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH
Confidence 456677777777777777777665
No 141
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=29.24 E-value=2.4e+02 Score=23.56 Aligned_cols=10 Identities=30% Similarity=0.594 Sum_probs=5.2
Q ss_pred CChhhhhhHH
Q 015162 119 ITETERNEFE 128 (412)
Q Consensus 119 ~t~~e~~~l~ 128 (412)
+|+.|..++.
T Consensus 21 FT~~ELeSlK 30 (109)
T 2fcw_A 21 LTDKELEAFR 30 (109)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 5665554443
No 142
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=28.96 E-value=1.5e+02 Score=20.82 Aligned_cols=37 Identities=22% Similarity=0.331 Sum_probs=16.1
Q ss_pred HHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 134 LKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 134 LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
|++....|...-..|+..-|+++.-+..|++.+..+|
T Consensus 8 lrkkiarlkkdnlqlerdeqnlekiianlrdeiarle 44 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLE 44 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHH
Confidence 3333444444333344444444444555555444433
No 143
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=28.95 E-value=93 Score=24.56 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=26.1
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
.+-+..|......+..++.+|..+...+..++..++..|+
T Consensus 64 ~e~~~~L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~ 103 (107)
T 1fxk_A 64 DELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQ 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666677777777666666677776666654
No 144
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=28.94 E-value=59 Score=30.99 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=20.8
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhhhhh
Q 015162 141 LQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLANLLKKPGFSSALN 194 (412)
Q Consensus 141 L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~vlq~p~f~~~L~ 194 (412)
|..++..|..++..|...++.++++|. ++-.-|.++.+-|.++-.++
T Consensus 59 L~~ql~~L~arNe~L~~~Lk~ar~El~-------~LkeElerL~sPPL~iGtvl 105 (251)
T 3m9b_A 59 LEARIDSLAARNSKLMETLKEARQQLL-------ALREEVDRLGQPPSGYGVLL 105 (251)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHH-------HHHHHHHHHHSCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHhcCCCceEEEEE
Confidence 333444444444444444444444333 44444455555555544444
No 145
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=28.93 E-value=57 Score=31.05 Aligned_cols=37 Identities=16% Similarity=0.148 Sum_probs=20.3
Q ss_pred HHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 131 IERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 131 I~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
+..|+++...|..+..+|......+..++..|++.|.
T Consensus 56 l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeEle 92 (251)
T 3m9b_A 56 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVD 92 (251)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555555556666666555
No 146
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=28.65 E-value=1.9e+02 Score=21.74 Aligned_cols=36 Identities=36% Similarity=0.429 Sum_probs=28.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHH
Q 015162 128 EAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVR 163 (412)
Q Consensus 128 ~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~ 163 (412)
+.+|..|-+-++.|..||..++.+.+.++.+-..|+
T Consensus 26 eAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr 61 (63)
T 2w6a_A 26 EAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLR 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhc
Confidence 568888888888899988888888887777766654
No 147
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=28.36 E-value=65 Score=27.48 Aligned_cols=13 Identities=31% Similarity=0.460 Sum_probs=2.4
Q ss_pred HHHHHHHHHHHhH
Q 015162 127 FEAKIERLKKENS 139 (412)
Q Consensus 127 l~~eI~~LK~d~~ 139 (412)
+..+|+.||+++.
T Consensus 4 l~~~~~~l~~~~~ 16 (182)
T 3kqg_A 4 LNAQIPELKSDLE 16 (182)
T ss_dssp ---------CHHH
T ss_pred hhhhHHHHHHHHH
Confidence 4556677776654
No 148
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=28.34 E-value=87 Score=25.14 Aligned_cols=22 Identities=9% Similarity=0.071 Sum_probs=8.1
Q ss_pred HhHHHHHHHHHHhhccHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYH 158 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~q 158 (412)
....+..+|..|+..+..+..+
T Consensus 11 ~~~~~~~~l~~L~~~~~~l~~~ 32 (112)
T 1l8d_A 11 KKTTIEEERNEITQRIGELKNK 32 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333
No 149
>1bf5_A Signal transducer and activator of transcription 1-alpha/beta; complex (SH2 domain/DNA), SH2 domain, transcription factor; HET: DNA PTR; 2.90A {Homo sapiens} SCOP: a.47.1.1 b.2.5.5 d.93.1.1
Probab=28.33 E-value=84 Score=33.33 Aligned_cols=38 Identities=16% Similarity=0.447 Sum_probs=24.9
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHH
Q 015162 125 NEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSV 162 (412)
Q Consensus 125 ~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L 162 (412)
..++..++.|+...+.+..++..|++.|..+..+.+.+
T Consensus 5 ~~i~~~~~~l~~~~q~~e~~~k~Le~~Qe~f~~~y~~~ 42 (575)
T 1bf5_A 5 KELDSKVRNVKDKVMCIEHEIKSLEDLQDEYDFKCKTL 42 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 34566777777777777777777777666555444433
No 150
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=28.29 E-value=1.1e+02 Score=23.95 Aligned_cols=21 Identities=29% Similarity=0.314 Sum_probs=9.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHh
Q 015162 129 AKIERLKKENSLLQLELRRRE 149 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~ 149 (412)
.++..|..++..|..+|..|+
T Consensus 43 ~r~~~L~~eN~~L~~~v~~L~ 63 (78)
T 1gu4_A 43 HKVLELTAENERLQKKVEQLS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444333
No 151
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=27.70 E-value=1.5e+02 Score=24.57 Aligned_cols=35 Identities=14% Similarity=0.191 Sum_probs=20.7
Q ss_pred HHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 132 ERLKKENSLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 132 ~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
..|-.++.+|.=++..|+.....++..+..+...+
T Consensus 19 AQLDNEKsal~YqVdlLKD~LEe~eE~~aql~Re~ 53 (103)
T 4h22_A 19 AQLDNEKTNFMYQVDTLKDMLLELEEQLAESRRQY 53 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666666666666666666666665555443
No 152
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=27.62 E-value=1.3e+02 Score=21.52 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=18.9
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHH
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRESGNHEF 155 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l 155 (412)
|...++.-+.+|..++..|...+..|+....++
T Consensus 18 enaklenivarlendnanlekdianlekdianl 50 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANL 50 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHH
Confidence 444555666666666666666665555444333
No 153
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=27.43 E-value=2.5e+02 Score=22.88 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=25.9
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
...+..+|.+|+.++.....++.+|......-...-...+.....++
T Consensus 7 ~e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~aE~~~~~ie 53 (97)
T 2eqb_B 7 YNQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTKAEEEADKLN 53 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777777776666666666544444444333444333333
No 154
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=26.87 E-value=1.8e+02 Score=20.97 Aligned_cols=39 Identities=15% Similarity=0.140 Sum_probs=22.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 129 AKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
..+..|+..+..|...-.+|-.-.+....++..|++.|.
T Consensus 9 ~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele 47 (51)
T 3m91_A 9 RDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVD 47 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556666666665555555555555555555555544
No 155
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=26.86 E-value=1e+02 Score=25.77 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=23.8
Q ss_pred HHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Q 015162 136 KENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQ 173 (412)
Q Consensus 136 ~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Q 173 (412)
+|+.+|.....+.+++...|..+++.|+.+|...+..+
T Consensus 4 ~e~~~~~~~~~~~e~e~~~l~~~~~el~~~l~~~~~~~ 41 (125)
T 1joc_A 4 DERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAV 41 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555666666666666677777777777766544443
No 156
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=26.77 E-value=2e+02 Score=32.70 Aligned_cols=25 Identities=4% Similarity=-0.045 Sum_probs=9.7
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQS 161 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~ 161 (412)
++..+..++..|+++...+..+++.
T Consensus 978 e~~~~~~~v~~L~~e~~~l~~~~~~ 1002 (1080)
T 2dfs_A 978 EAKNATNRVLSLQEEIAKLRKELHQ 1002 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333344443333333333333
No 157
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=26.70 E-value=2.4e+02 Score=22.34 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=30.5
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIAC 179 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsf 179 (412)
-+..+..||.+.+..+..++.+++..+.|.+......+++-.-
T Consensus 25 AKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~ 67 (81)
T 1wt6_A 25 TRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQER 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888999999888888888887777766555444444333
No 158
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=26.68 E-value=2.5e+02 Score=22.56 Aligned_cols=47 Identities=17% Similarity=0.314 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHhHHH-------HHHHHHHhhccHHHHHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLL-------QLELRRRESGNHEFEYHVQSVRERLRYLENRQ 173 (412)
Q Consensus 127 l~~eI~~LK~d~~~L-------~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Q 173 (412)
+...|..||.+.... ..++...++.......++..|..|++.++..-
T Consensus 7 IKkKm~~lk~e~e~a~drae~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~el 60 (101)
T 3u1c_A 7 IKKKMQMLKLDKENALDRAEQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSR 60 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 344444454444433 33333334444444555555555555554433
No 159
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=26.64 E-value=2.4e+02 Score=22.33 Aligned_cols=45 Identities=18% Similarity=0.156 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
++..||..|+-....|..|-...+.+...+..+++.|.+.|..-+
T Consensus 23 ~L~qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd 67 (81)
T 3qh9_A 23 ELLQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKD 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhH
Confidence 455566666666666666555555555555566666666554443
No 160
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=26.39 E-value=1.2e+02 Score=21.57 Aligned_cols=35 Identities=26% Similarity=0.364 Sum_probs=26.9
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
++..|..=+.+|+..+.+++..+..|+.-+..+|.
T Consensus 18 enaklenivarlendnanlekdianlekdianler 52 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANLER 52 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 56667777888888888888888888877666554
No 161
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=26.37 E-value=86 Score=25.30 Aligned_cols=7 Identities=43% Similarity=0.425 Sum_probs=2.8
Q ss_pred ccccccc
Q 015162 98 LLKNIHR 104 (412)
Q Consensus 98 lL~~I~R 104 (412)
.|+.++|
T Consensus 25 ~lKq~RR 31 (90)
T 2wt7_B 25 RLKQKRR 31 (90)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3444443
No 162
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=26.16 E-value=2.5e+02 Score=22.38 Aligned_cols=58 Identities=14% Similarity=0.265 Sum_probs=35.0
Q ss_pred hhhHHHHHHHHHHHhHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 124 RNEFEAKIERLKKENSLLQLELRRRESGNH------EFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 124 ~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq------~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
...+..+|..|+.+...|..++..++.+.. .....+..|. ...-+...=|.|+..|+.
T Consensus 3 ~~~L~~~i~~L~~q~~~L~~ei~~~~a~L~~~~~~~~~~~hI~~Lh-~YNeiKD~gq~L~g~iA~ 66 (85)
T 3viq_B 3 KSQLESRVHLLEQQKEQLESSLQDALAKLKNRDAKQTVQKHIDLLH-TYNEIRDIALGMIGKVAE 66 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 456788899999999999999888875422 2222222222 123333444566666655
No 163
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=25.78 E-value=1.6e+02 Score=26.75 Aligned_cols=23 Identities=26% Similarity=0.715 Sum_probs=13.1
Q ss_pred hhcCCCCCCc--eEEcCC-CCeEEEe
Q 015162 23 MVDDPLTNSL--VSWSQS-GGSFIVW 45 (412)
Q Consensus 23 mv~d~~~~~i--I~W~~~-G~sFiI~ 45 (412)
++.+|.+-.. ++|-.+ |.+|.|.
T Consensus 30 ~~s~p~~~yflk~~W~~~l~sgF~L~ 55 (184)
T 3w03_C 30 LVSEPSITHFLQVSWEKTLESGFVIT 55 (184)
T ss_dssp BTTCTTSCEEEEEEESSCGGGEEEEE
T ss_pred ecCCCCceEEEEEEeccCCCCceEEE
Confidence 4555554333 589776 5666654
No 164
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=25.70 E-value=61 Score=23.52 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHhhc
Q 015162 126 EFEAKIERLKKENSLLQLELRRRESG 151 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL~qq 151 (412)
.|+.++..|..++..|..++..|++.
T Consensus 26 ~LE~~v~~L~~eN~~L~~~~~~L~~~ 51 (55)
T 1dh3_A 26 SLENRVAVLENQNKTLIEELKALKDL 51 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666666544
No 165
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=25.68 E-value=2.4e+02 Score=22.09 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 122 TERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 122 ~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
.|.+.+..--+.|+.-...|..-+.+|++++..+...+..|+++..-++
T Consensus 25 aEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 25 AELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 166
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=25.46 E-value=3.2e+02 Score=24.27 Aligned_cols=38 Identities=13% Similarity=0.217 Sum_probs=19.6
Q ss_pred CCChhhhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHH
Q 015162 118 PITETERNEFEAKIERLKKENSLLQLELRRRESGNHEF 155 (412)
Q Consensus 118 ~~t~~e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l 155 (412)
.+|+.++..+.+-.+..+.+...|..++...+++.+.+
T Consensus 67 nLT~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL 104 (175)
T 3lay_A 67 PLTTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNAL 104 (175)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36777666655544545555555555555444444333
No 167
>3t97_C Nuclear pore glycoprotein P62; nucleoporin, coiled-coil, nuclear pore complex, central TRAN channel, alpha helical proteins, triple helix; 2.80A {Rattus norvegicus}
Probab=25.22 E-value=31 Score=26.19 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=7.9
Q ss_pred HHHHHHHHHhhccHHHHHH
Q 015162 140 LLQLELRRRESGNHEFEYH 158 (412)
Q Consensus 140 ~L~~EL~rL~qqqq~l~~q 158 (412)
.|..++.+.+..|..+.++
T Consensus 16 ~L~~~v~~~e~~Q~~ldq~ 34 (64)
T 3t97_C 16 SLHREVEKVKLDQKRLDQE 34 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3444444444444433333
No 168
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=25.00 E-value=2.6e+02 Score=22.22 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=23.1
Q ss_pred HHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 015162 131 IERLKKENSLLQLELRRRESGNHEFEYHVQSVRER 165 (412)
Q Consensus 131 I~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~er 165 (412)
|..|-.....-...+..|+++|..|+.++..+.++
T Consensus 11 mq~LNdRlAsyIdKVR~LEqqN~~Le~~i~~l~~~ 45 (93)
T 3s4r_A 11 LQELNDRFANLIDKVRFLEQQNKILLAELEQLKGQ 45 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34444444555667777888888888887776653
No 169
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=24.74 E-value=2.9e+02 Score=22.69 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYLEN 171 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~ 171 (412)
+..+.-.|.+..+.|..|-.+|++.......++..|...|..+..
T Consensus 35 LIqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ 79 (104)
T 3s9g_A 35 LIKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRA 79 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHH
Confidence 334444455555555555555555555555566666665554443
No 170
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=24.69 E-value=2.3e+02 Score=26.11 Aligned_cols=45 Identities=18% Similarity=0.130 Sum_probs=36.9
Q ss_pred hhhhHHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 123 ERNEFEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 123 e~~~l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
+...+..+|+.|+.+...|..++.|++-+..++..++..=++.+.
T Consensus 60 e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~RkR~~rE~e~~~ 104 (213)
T 4ani_A 60 ELAAAKAQIAELEAKLSEMEHRYLRLYADFENFRRRTRQEMEAAE 104 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345688899999999999999999999999988888776666544
No 171
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=24.07 E-value=1.3e+02 Score=23.01 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYH 158 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~q 158 (412)
|+.+|..|...+..|..|...|+.+...|..+
T Consensus 34 LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~E 65 (70)
T 1gd2_E 34 LETQVVTLKELHSSTTLENDQLRQKVRQLEEE 65 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444443333333
No 172
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=23.65 E-value=2.5e+02 Score=21.51 Aligned_cols=35 Identities=11% Similarity=0.225 Sum_probs=13.8
Q ss_pred HHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 136 KENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 136 ~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
.....+..++...++....+..+|..|..+++.++
T Consensus 20 ~~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE 54 (81)
T 1ic2_A 20 DRAEQAEADKKAAEERSKQLEDELVALQKKLKGTE 54 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333333333333333333444444444444333
No 173
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=23.54 E-value=92 Score=26.62 Aligned_cols=43 Identities=14% Similarity=0.216 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRRESGNHEFEYHVQSVRERLRYL 169 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~ 169 (412)
+++-++-|++....|...+.++..+...+..++..+++.++.+
T Consensus 96 ~~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 96 IDEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666777777777777776666666666666666555433
No 174
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=23.51 E-value=1.3e+02 Score=21.04 Aligned_cols=6 Identities=17% Similarity=0.722 Sum_probs=2.2
Q ss_pred HHHHHH
Q 015162 130 KIERLK 135 (412)
Q Consensus 130 eI~~LK 135 (412)
.|+++-
T Consensus 10 kI~kVd 15 (42)
T 2l5g_B 10 NMDRVD 15 (42)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 175
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=23.29 E-value=2.8e+02 Score=22.06 Aligned_cols=22 Identities=14% Similarity=0.104 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRRR 148 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~rL 148 (412)
+...|..||.+......+...+
T Consensus 7 iKkKm~~lk~e~e~a~d~ae~~ 28 (101)
T 3u59_A 7 IKKKMQMLKLDKENAIDRAEQA 28 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555544444333333
No 176
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=22.96 E-value=98 Score=25.46 Aligned_cols=27 Identities=19% Similarity=0.374 Sum_probs=11.2
Q ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHH
Q 015162 141 LQLELRRRESGNHEFEYHVQSVRERLR 167 (412)
Q Consensus 141 L~~EL~rL~qqqq~l~~qvq~L~erL~ 167 (412)
|..||..|.++-+.|...+..+.+.|+
T Consensus 11 Lk~El~~L~~~E~~LD~~i~~~~~~l~ 37 (106)
T 2aze_B 11 LTQDLRQLQESEQQLDHLMNICTTQLR 37 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444333344444444444443
No 177
>3v86_A De novo design helix; computational design of A protein crystal, helical coil, DE designed helix, de novo protein; 2.91A {Synthetic}
Probab=22.79 E-value=1.1e+02 Score=18.96 Aligned_cols=23 Identities=22% Similarity=0.316 Sum_probs=13.6
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRRR 148 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~rL 148 (412)
.+.+|+-.||-+..+|..|+..|
T Consensus 4 qlkdevgelkgevralkdevkdl 26 (27)
T 3v86_A 4 QLKDEVGELKGEVRALKDEVKDL 26 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHhHHHHHHHHHhcc
Confidence 34556666666666666665543
No 178
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=22.77 E-value=1.9e+02 Score=30.34 Aligned_cols=13 Identities=23% Similarity=0.532 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHH
Q 015162 161 SVRERLRYLENRQ 173 (412)
Q Consensus 161 ~L~erL~~~e~~Q 173 (412)
.|+++++.++.+.
T Consensus 114 ELRRrIqyLKekV 126 (562)
T 3ghg_A 114 DLRSRIEVLKRKV 126 (562)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555554433
No 179
>1sz7_A BET3 homolog, trafficking protein particle complex subunit 3; alpha-beta plait, trapp complex, palmitoylated, transport PR; HET: PLM; 1.55A {Homo sapiens} PDB: 2cfh_A* 2pwn_A* 3kxc_A* 1wc8_A* 2j3w_D* 2j3r_A* 2j3t_A* 1wc9_A* 2c0j_A*
Probab=22.68 E-value=61 Score=29.71 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=45.4
Q ss_pred chH-HHHHHhhcCCCCCCceEEcCCCCeEEE-eCCchhhhhc-cccccCCCCchhhhhc-----ccccccc
Q 015162 15 PFL-IKTYEMVDDPLTNSLVSWSQSGGSFIV-WNPPDFAKDL-LPLYFKHNNFSSFVRQ-----LNTYGFR 77 (412)
Q Consensus 15 ~Fl-~KLy~mv~d~~~~~iI~W~~~G~sFiI-~d~~~F~~~v-Lp~~Fkh~nfsSFvRQ-----LN~YGF~ 77 (412)
.|+ +.+|.++=.- ..+...|+++++.|+| .|..-+..-| ||+-.+.-+|+.|+.= |.+-||.
T Consensus 85 ~fI~k~~Wk~lFgk-~ad~L~~t~~~~~Y~L~~D~nPL~~fvslP~~~~~l~y~~f~cGIIrGaL~~lg~~ 154 (200)
T 1sz7_A 85 DVIAKVAFKMYLGI-TPSITNWSPAGDEFSLILENNPLVDFVELPDNHSSLIYSNLLCGVLRGALEMVQMA 154 (200)
T ss_dssp HHHHHTHHHHHHSC-CCEEECCCTTSCEEEEEESSCTTCTTCCCCGGGTTCCTTTHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHHhCC-CCccceecCCCCEEEEEECCcHHHHhccCCccccCCchhhhHHHHHHHHHHhCCCE
Confidence 466 3477777664 3456889999999999 6766555433 6776677789999853 7888998
No 180
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=22.60 E-value=1.2e+02 Score=19.63 Aligned_cols=12 Identities=33% Similarity=0.365 Sum_probs=4.9
Q ss_pred cHHHHHHHHHHH
Q 015162 152 NHEFEYHVQSVR 163 (412)
Q Consensus 152 qq~l~~qvq~L~ 163 (412)
+....+.++.|+
T Consensus 17 nyaakqkvqalr 28 (33)
T 1fmh_B 17 NYAAKQKVQALR 28 (33)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 333344444443
No 181
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=22.58 E-value=1.1e+02 Score=25.06 Aligned_cols=30 Identities=20% Similarity=0.199 Sum_probs=15.4
Q ss_pred HHHHHHHHhHHHHHHHHHHhhccHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRRESGNHEFEYHV 159 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL~qqqq~l~~qv 159 (412)
++..|++++..|..|-.+|+++...|+.++
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~LE~~L 42 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRMLEAQL 42 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555544444443
No 182
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=22.36 E-value=75 Score=31.15 Aligned_cols=22 Identities=9% Similarity=0.051 Sum_probs=6.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHhh
Q 015162 129 AKIERLKKENSLLQLELRRRES 150 (412)
Q Consensus 129 ~eI~~LK~d~~~L~~EL~rL~q 150 (412)
++|.+|......+..++..|+.
T Consensus 4 ~~~~~lE~~Il~~~~~i~~L~~ 25 (319)
T 1fzc_C 4 EEIMKYEASILTHDSSIRYLQE 25 (319)
T ss_dssp ------CTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhChHHHHHHHHH
Confidence 3444444444444444444433
No 183
>3mtu_E Head morphogenesis protein, tropomyosin alpha-1 C; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Bacillus phage PHI29}
Probab=22.32 E-value=2.1e+02 Score=22.42 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=19.8
Q ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 145 LRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 145 L~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
|+.||-.+-..+..|-.|++.|.....+...|-.-|.+
T Consensus 32 ~~~~~~~~~~~EKTIDDLEDkL~~eKEK~k~i~eeLDq 69 (77)
T 3mtu_E 32 LQQLRVNYGSFVSEYNDLEEKVAHAKEENLNMHQMLDQ 69 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33444445555566666666665555555444444444
No 184
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=22.31 E-value=3.2e+02 Score=24.37 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=14.2
Q ss_pred HhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Q 015162 137 ENSLLQLELRRRESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 137 d~~~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e 170 (412)
.+..|..||.+++........+...|.+++..+|
T Consensus 98 ri~~L~~El~~~k~~~~k~~~e~r~L~Ekl~~lE 131 (168)
T 3o0z_A 98 RITSLQEEVKHLKHNLEKVEGERKEAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444444443
No 185
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.49 E-value=1.4e+02 Score=19.76 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=19.9
Q ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHH
Q 015162 139 SLLQLELRRRESGNHEFEYHVQSVRERL 166 (412)
Q Consensus 139 ~~L~~EL~rL~qqqq~l~~qvq~L~erL 166 (412)
++|...+..|-++++.++.++..|++-|
T Consensus 3 nQLEdKvEeLl~~~~~Le~EV~RLk~lL 30 (33)
T 3c3g_A 3 KXIEXKLXEIXSKXYHXENXLARIKXLL 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 3466667777777888888888777644
No 186
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=21.40 E-value=1.1e+02 Score=21.30 Aligned_cols=22 Identities=18% Similarity=0.379 Sum_probs=13.0
Q ss_pred hhccHHHHHHHHHHHHHHHHHH
Q 015162 149 ESGNHEFEYHVQSVRERLRYLE 170 (412)
Q Consensus 149 ~qqqq~l~~qvq~L~erL~~~e 170 (412)
...++.++.+|..|+.||....
T Consensus 15 ~~r~e~LE~Ri~~LE~KLd~L~ 36 (43)
T 2pnv_A 15 NERSEDFEKRIVTLETKLETLI 36 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHHHHHHH
Confidence 3355666666666666665443
No 187
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=21.08 E-value=2.5e+02 Score=28.41 Aligned_cols=13 Identities=23% Similarity=0.555 Sum_probs=8.0
Q ss_pred cchhhhhhccccc
Q 015162 255 DFWTFFLCGIGEA 267 (412)
Q Consensus 255 ~~~e~~l~~~~~~ 267 (412)
-.|+.|-.|-|+.
T Consensus 206 R~W~~Yk~GFG~~ 218 (409)
T 1m1j_C 206 RNWVQYKEGFGHL 218 (409)
T ss_dssp CCHHHHHHCEEEE
T ss_pred CCHHHHHhhhCCc
Confidence 3466776666654
No 188
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=20.90 E-value=2.5e+02 Score=20.41 Aligned_cols=43 Identities=16% Similarity=0.205 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015162 140 LLQLELRRRESGNHEFEYHVQSVRERLRYLENRQTQMIACLAN 182 (412)
Q Consensus 140 ~L~~EL~rL~qqqq~l~~qvq~L~erL~~~e~~Qq~mlsfL~~ 182 (412)
.|..++.-|+.++.++..+++.-..+|.+.|..--.|-..|.+
T Consensus 7 QL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~ 49 (54)
T 1deb_A 7 QLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQ 49 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHH
Confidence 4455555555566666666666666666666555555444433
No 189
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=20.27 E-value=4.6e+02 Score=23.33 Aligned_cols=21 Identities=10% Similarity=0.147 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHH
Q 015162 127 FEAKIERLKKENSLLQLELRR 147 (412)
Q Consensus 127 l~~eI~~LK~d~~~L~~EL~r 147 (412)
|.+.+..|......|..++..
T Consensus 53 Lq~~~~~L~~~k~~Leke~~~ 73 (168)
T 3o0z_A 53 LQERNRILENSKSQTDKDYYQ 73 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444433
No 190
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=20.16 E-value=2.4e+02 Score=21.84 Aligned_cols=19 Identities=32% Similarity=0.342 Sum_probs=7.1
Q ss_pred HHHHHHHHhHHHHHHHHHH
Q 015162 130 KIERLKKENSLLQLELRRR 148 (412)
Q Consensus 130 eI~~LK~d~~~L~~EL~rL 148 (412)
.+..|+.+...=..|+.+|
T Consensus 19 ~l~~Lr~eL~~Ke~eI~~L 37 (75)
T 3a7o_A 19 TLAILQKELKSKEQEIRRL 37 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444333333333333
No 191
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=20.15 E-value=2.3e+02 Score=32.26 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=9.1
Q ss_pred hHHHHHHHHHHHhHHHHHHHHH
Q 015162 126 EFEAKIERLKKENSLLQLELRR 147 (412)
Q Consensus 126 ~l~~eI~~LK~d~~~L~~EL~r 147 (412)
.+..+++.++.....+..++..
T Consensus 861 ~L~~eL~el~~~L~~le~~l~e 882 (1184)
T 1i84_S 861 AKDEELQRTKERQQKAEAELKE 882 (1184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444433333333
Done!