BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015166
(412 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GNO|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase
pdb|3GNP|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-Glucosidase With
Octyl-Beta- D-Thio-Glucoside
pdb|3GNR|A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase With
Covalently Bound 2-deoxy-2-fluoroglucoside To The
Catalytic Nucleophile E396
Length = 488
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/410 (76%), Positives = 360/410 (87%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M DMGMDAYRFSIAWSRI+PNG GQ+NQAG+DHYNKLIDALLAKGI+PYVTLYHWDLPQA
Sbjct: 79 MADMGMDAYRFSIAWSRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHWDLPQA 138
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+DKYKGWLDRQI++DFA YAETCF++FGDRVKHWIT NEPHT IQGYD GLQAPGRCS
Sbjct: 139 LEDKYKGWLDRQIVDDFAAYAETCFREFGDRVKHWITLNEPHTVAIQGYDAGLQAPGRCS 198
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+LLHL+C+AGNS TEPY+VAH+ +L HA A IYR KYKA Q G LGIAFDV+W+E SN
Sbjct: 199 VLLHLYCKAGNSGTEPYVVAHHFILAHAAAASIYRTKYKATQNGQLGIAFDVMWFEPMSN 258
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
+T D EA +RAQ+FQLGWF DP FGDYP++MR RVG RLPRFT+ EAA++KG+LDFVGI
Sbjct: 259 TTIDIEAAKRAQEFQLGWFADPFFFGDYPATMRARVGERLPRFTADEAAVVKGALDFVGI 318
Query: 241 NHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLM 300
NHYTT+Y + N TN+IG +LN++LAD G +++PFKNGKPI DRANSIWLYIVPRGMRSLM
Sbjct: 319 NHYTTYYTRHNNTNIIGTLLNNTLADTGTVSLPFKNGKPIGDRANSIWLYIVPRGMRSLM 378
Query: 301 NYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNV 360
NY+K++Y +P V ITENGMDD NN F K+ALKD KRIKYHNDYLTNL A+IKEDGC+V
Sbjct: 379 NYVKERYNSPPVYITENGMDDSNNPFISIKDALKDSKRIKYHNDYLTNLAASIKEDGCDV 438
Query: 361 KGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
+GYF WSLLDNWEWAAGY+SRFGLYFVDYKDN KRYPKNSVQWFK L +
Sbjct: 439 RGYFAWSLLDNWEWAAGYSSRFGLYFVDYKDNLKRYPKNSVQWFKALLKT 488
>pdb|3PTK|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTK|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
pdb|3PTM|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTM|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With 2- Fluoroglucopyranoside
pdb|3PTQ|A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
pdb|3PTQ|B Chain B, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12
With Dinitrophenyl
2-Deoxy-2-Fluoro-Beta-D-Glucopyranoside
Length = 505
Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust.
Identities = 225/414 (54%), Positives = 289/414 (69%), Gaps = 13/414 (3%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
MKDMGMDAYRFSI+W+RI PNG+ G +N+ G+ +YN LI+ LL+KG++P++TL+HWD P
Sbjct: 97 MKDMGMDAYRFSISWTRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHWDSP 156
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL+DKY G+L IINDF YAE CF++FGDRVK+WITFNEP TF GY GL APGR
Sbjct: 157 QALEDKYNGFLSPNIINDFKDYAEICFKEFGDRVKNWITFNEPWTFCSNGYATGLFAPGR 216
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS C G+S EPY H+ LL HA+ +Y+ KY+A Q G +GI W+
Sbjct: 217 CSPWEKGNCSVGDSGREPYTACHHQLLAHAETVRLYKAKYQALQKGKIGITLVSHWFVPF 276
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
S S + +A +RA DF GWF+DPL+ GDYP SMR VG+RLP+FT ++ L+KG+ DF+
Sbjct: 277 SRSKSNNDAAKRAIDFMFGWFMDPLIRGDYPLSMRGLVGNRLPQFTKEQSKLVKGAFDFI 336
Query: 239 GINHYTTFYAQR----NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
G+N+YT YA N N N D+ A +NG PI +A S WLY+ P+
Sbjct: 337 GLNYYTANYADNLPPSNGLN------NSYTTDSRANLTGVRNGIPIGPQAASPWLYVYPQ 390
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIK 354
G R L+ Y+K+ Y NPTV ITENG+D+ NN+ P +EALKDD RI+Y++ +L +LL+AI+
Sbjct: 391 GFRDLLLYVKENYGNPTVYITENGVDEFNNKTLPLQEALKDDARIEYYHKHLLSLLSAIR 450
Query: 355 EDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
DG NVKGYF WSLLDN+EW+ GYT RFG+ FVDY D +KRYPKNS WFK FL
Sbjct: 451 -DGANVKGYFAWSLLDNFEWSNGYTVRFGINFVDYNDGRKRYPKNSAHWFKKFL 503
>pdb|2RGL|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGL|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
pdb|2RGM|B Chain B, Rice Bglu1 Beta-Glucosidase, A Plant
ExoglucanaseBETA-Glucosidase
Length = 481
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/409 (54%), Positives = 276/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+ITENGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITENGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3F4V|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F4V|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5J|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5K|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3F5L|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1, A Plant
ExoglucanaseBETA- Glucosidase
pdb|3AHT|A Chain A, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHT|B Chain B, Crystal Structure Of Rice Bglu1 E176q Mutant In Complex
With Laminaribiose
pdb|3AHV|A Chain A, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
pdb|3AHV|B Chain B, Semi-Active E176q Mutant Of Rice Bglu1 Covalent Complex
With 2-Deoxy- 2-Fluoroglucoside
Length = 481
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 276/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFN+P + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNQPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+ITENGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITENGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCW|A Chain A, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCW|B Chain B, Crystal Structure Of Rice Bglu1 E386gY341A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTAVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+IT NGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITGNGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCR|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCR|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant
pdb|3SCS|A Chain A, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCS|B Chain B, Crystal Structure Of Rice Bglu1 E386s Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 435 bits (1119), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+IT NGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITSNGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCP|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCP|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant
pdb|3SCQ|A Chain A, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCQ|B Chain B, Crystal Structure Of Rice Bglu1 E386a Mutant Complexed
With Alpha- Glucosyl Fluoride
Length = 481
Score = 435 bits (1118), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+IT NGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITANGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCV|A Chain A, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
pdb|3SCV|B Chain B, Crystal Structure Of Rice Bglu1 E386gS334A MUTANT
COMPLEXED WITH Cellotetraose
Length = 481
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYAADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+IT NGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITGNGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|3SCN|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCN|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant
pdb|3SCO|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCO|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Alpha- Glucosyl Fluoride
pdb|3SCT|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCT|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellotetraose
pdb|3SCU|A Chain A, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
pdb|3SCU|B Chain B, Crystal Structure Of Rice Bglu1 E386g Mutant Complexed
With Cellopentaose
Length = 481
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/409 (53%), Positives = 275/409 (67%), Gaps = 12/409 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK + DAYRFSI+WSRIFP+G G++NQ GV +YN LI+ LL KGI PYV LYH+DLP A
Sbjct: 82 MKSLNFDAYRFSISWSRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHYDLPLA 141
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+ KY GWL+ ++ + F YA+ CF+ FG+RVKHW TFNEP + GYD G P RC+
Sbjct: 142 LEKKYGGWLNAKMADLFTEYADFCFKTFGNRVKHWFTFNEPRIVALLGYDQGTNPPKRCT 201
Query: 121 ILLHLFCRA-GNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
C A GNSATEPYIVAHN LL+HA YR KY+A Q G +GI D WYE+ S
Sbjct: 202 K-----CAAGGNSATEPYIVAHNFLLSHAAAVARYRTKYQAAQQGKVGIVLDFNWYEALS 256
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
NSTED A QRA+DF +GW+LDPL+ G YP M++ V RLP+FT +A L+KGS D++G
Sbjct: 257 NSTEDQAAAQRARDFHIGWYLDPLINGHYPQIMQDLVKDRLPKFTPEQARLVKGSADYIG 316
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
IN YT Y + L+ AD + KNGKPI +ANS WLYIVP GM
Sbjct: 317 INQYTASYMK--GQQLMQQTPTSYSADWQVTYVFAKNGKPIGPQANSNWLYIVPWGMYGC 374
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+NYIKQKY NPTV+IT NGMD P N + L+D R+ ++ YLT L AI E G N
Sbjct: 375 VNYIKQKYGNPTVVITGNGMDQPAN--LSRDQYLRDTTRVHFYRSYLTQLKKAIDE-GAN 431
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
V GYF WSLLDN+EW +GYTS+FG+ +VD+ + +R+PK S WF++ L
Sbjct: 432 VAGYFAWSLLDNFEWLSGYTSKFGIVYVDF-NTLERHPKASAYWFRDML 479
>pdb|1CBG|A Chain A, The Crystal Structure Of A Cyanogenic Beta-Glucosidase
From White Clover (Trifolium Repens L.), A Family 1
Glycosyl-Hydrolase
Length = 490
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/412 (50%), Positives = 274/412 (66%), Gaps = 9/412 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
MKDM +DAYRFSI+W R+ P G +G +N+ G+++YN LI+ +LA G++PYVTL+HWD+P
Sbjct: 82 MKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWDVP 141
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL+D+Y+G+L R I++DF YAE CF++FGDRVKHWIT NEP ++ Y G APGR
Sbjct: 142 QALEDEYRGFLGRNIVDDFRDYAELCFKEFGDRVKHWITLNEPWGVSMNAYAYGTFAPGR 201
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS L L C G+S EPY+ AH LL HA A +Y+ KY+A Q G +GI W+E A
Sbjct: 202 CSDWLKLNCTGGDSGREPYLAAHYQLLAHAAAARLYKTKYQASQNGIIGITLVSHWFEPA 261
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
S D +A +R DF LGWF+ PL G YP SMR V RLP+F++ E+ L GS DF+
Sbjct: 262 SKEKADVDAAKRGLDFMLGWFMHPLTKGRYPESMRYLVRKRLPKFSTEESKELTGSFDFL 321
Query: 239 GINHYTTFYAQR--NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGM 296
G+N+Y+++YA + N + DSL +A NGKP+ A S WL I P+G+
Sbjct: 322 GLNYYSSYYAAKAPRIPNARPAIQTDSLINATFE----HNGKPLGPMAASSWLCIYPQGI 377
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
R L+ Y+K Y NP + ITENG ++ N+ +E+L D RI Y+ +L +L AI D
Sbjct: 378 RKLLLYVKNHYNNPVIYITENGRNEFNDPTLSLQESLLDTPRIDYYYRHLYYVLTAIG-D 436
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
G NVKGYF WSL DN EW +GYT RFGL FVD+K+N KR+PK S WFK+FL
Sbjct: 437 GVNVKGYFAWSLFDNMEWDSGYTVRFGLVFVDFKNNLKRHPKLSAHWFKSFL 488
>pdb|4A3Y|A Chain A, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
pdb|4A3Y|B Chain B, Crystal Structure Of Raucaffricine Glucosidase From
Ajmaline Biosynthesis Pathway
Length = 540
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/426 (47%), Positives = 268/426 (62%), Gaps = 21/426 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K++G+DAYRFSI+WSR+ P G +G +N+ G+++YN LID LLA GI+P+VTL+HWD+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPG- 117
QAL+D+Y G+L +I++DF YAE CF +FGDRVKHW+T NEP TF++ GY GL APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSILL-HLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAK 161
RCS + C GN TEPY V H+ LL HA ++Y+ K++
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSLGIAFDVIWYES-ASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRL 220
Q G +GI+ W E NS D EA RA DF LGWF++P+ GDYP SM+ VGSRL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPI 280
P+F+ ++ +LKGS DFVG+N+YT Y +TN G D +NG PI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 ADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIK 340
++ S WL I P G+R ++ Y K+ Y P + +TENG+DD N EA KD R+K
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNS 400
Y D++ N+ A+ DG NVKGYF WSLLDN+EW GY RFG+ +DY DN RYPK+S
Sbjct: 445 YLQDHIFNVRQAMN-DGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Query: 401 VQWFKN 406
W N
Sbjct: 504 AVWLMN 509
>pdb|4ATD|A Chain A, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATD|B Chain B, Crystal Structure Of Native Raucaffricine Glucosidase
pdb|4ATL|A Chain A, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
pdb|4ATL|B Chain B, Crystal Structure Of Raucaffricine Glucosidase In Complex
With Glucose
Length = 513
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/426 (47%), Positives = 268/426 (62%), Gaps = 21/426 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K++G+DAYRFSI+WSR+ P G +G +N+ G+++YN LID LLA GI+P+VTL+HWD+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPG- 117
QAL+D+Y G+L +I++DF YAE CF +FGDRVKHW+T NEP TF++ GY GL APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNEPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSILL-HLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAK 161
RCS + C GN TEPY V H+ LL HA ++Y+ K++
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSLGIAFDVIWYES-ASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRL 220
Q G +GI+ W E NS D EA RA DF LGWF++P+ GDYP SM+ VGSRL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPI 280
P+F+ ++ +LKGS DFVG+N+YT Y +TN G D +NG PI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 ADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIK 340
++ S WL I P G+R ++ Y K+ Y P + +TENG+DD N EA KD R+K
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNS 400
Y D++ N+ A+ DG NVKGYF WSLLDN+EW GY RFG+ +DY DN RYPK+S
Sbjct: 445 YLQDHIFNVRQAMN-DGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Query: 401 VQWFKN 406
W N
Sbjct: 504 AVWLMN 509
>pdb|3U57|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U57|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5U|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|A Chain A, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|3U5Y|B Chain B, Structures Of Alkaloid Biosynthetic Glucosidases Decode
Substrate Specificity
pdb|4EK7|A Chain A, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
pdb|4EK7|B Chain B, High Speed X-ray Analysis Of Plant Enzymes At Room
Temperature
Length = 513
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/426 (47%), Positives = 268/426 (62%), Gaps = 21/426 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K++G+DAYRFSI+WSR+ P G +G +N+ G+++YN LID LLA GI+P+VTL+HWD+P
Sbjct: 85 LKNLGLDAYRFSISWSRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHWDVP 144
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPG- 117
QAL+D+Y G+L +I++DF YAE CF +FGDRVKHW+T N+P TF++ GY GL APG
Sbjct: 145 QALEDEYGGFLSPRIVDDFCEYAELCFWEFGDRVKHWMTLNQPWTFSVHGYATGLYAPGR 204
Query: 118 ---------------RCSILL-HLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAK 161
RCS + C GN TEPY V H+ LL HA ++Y+ K++
Sbjct: 205 GRTSPEHVNHPTVQHRCSTVAPQCICSTGNPGTEPYWVTHHLLLAHAAAVELYKNKFQRG 264
Query: 162 QGGSLGIAFDVIWYES-ASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRL 220
Q G +GI+ W E NS D EA RA DF LGWF++P+ GDYP SM+ VGSRL
Sbjct: 265 QEGQIGISHATQWMEPWDENSASDVEAAARALDFMLGWFMEPITSGDYPKSMKKFVGSRL 324
Query: 221 PRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPI 280
P+F+ ++ +LKGS DFVG+N+YT Y +TN G D +NG PI
Sbjct: 325 PKFSPEQSKMLKGSYDFVGLNYYTASYVTNASTNSSGSNNFSYNTDIHVTYETDRNGVPI 384
Query: 281 ADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIK 340
++ S WL I P G+R ++ Y K+ Y P + +TENG+DD N EA KD R+K
Sbjct: 385 GPQSGSDWLLIYPEGIRKILVYTKKTYNVPLIYVTENGVDDVKNTNLTLSEARKDSMRLK 444
Query: 341 YHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNS 400
Y D++ N+ A+ DG NVKGYF WSLLDN+EW GY RFG+ +DY DN RYPK+S
Sbjct: 445 YLQDHIFNVRQAMN-DGVNVKGYFAWSLLDNFEWGEGYGVRFGIIHIDYNDNFARYPKDS 503
Query: 401 VQWFKN 406
W N
Sbjct: 504 AVWLMN 509
>pdb|3AIU|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye
pdb|3AIV|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With An Aglycone Dimboa
pdb|3AIW|A Chain A, Crystal Structure Of Beta-Glucosidase In Rye Complexed
With 2-Deoxy-2- Fluoroglucoside And Dinitrophenol
Length = 564
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/411 (45%), Positives = 265/411 (64%), Gaps = 10/411 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
+KDMGM YRFSI+WSRI PNGTG+ NQ G+D+YN LI++L+ GI PYVT++HWD PQA
Sbjct: 137 LKDMGMKVYRFSISWSRILPNGTGKPNQKGIDYYNNLINSLIRHGIVPYVTIWHWDTPQA 196
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+DKY G+LD+QI+ND+ +AE CFQ FGDRVK+W TFNEPHT+ Y G+ APGRCS
Sbjct: 197 LEDKYGGFLDKQIVNDYKYFAELCFQSFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCS 256
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
L G+S EPY H+ LL HA+ ++++ Y +G+AFDV+ YE +
Sbjct: 257 PGLDCAVPEGDSLREPYTAGHHILLAHAEAVELFKAHYNKHGDSKIGMAFDVMGYEPYQD 316
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
S D +A +R+ D+ +GWFL+P++ GDYP SMR+ +G RLP FT E L S D +G+
Sbjct: 317 SFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMGL 376
Query: 241 NHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
N+YT+ +++ + ++ LN A A + T +G I + W+Y+ P+G+ L
Sbjct: 377 NYYTSRFSKHVDISSDYTPTLNTDDAYASSETTG-SDGNEIGPITGTYWIYMYPKGLTDL 435
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIK---ED 356
+ +K+KY NP + ITENG+ D + L D KR+ DYL ++A+K +
Sbjct: 436 LLIMKEKYGNPPIFITENGIADVEGD-PEMPDPLDDWKRL----DYLQRHISAVKDAIDQ 490
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNF 407
G +V+G+F W L+DN+EW +GY+SRFGL ++D +D KR K S +WF F
Sbjct: 491 GADVRGHFTWGLIDNFEWGSGYSSRFGLVYIDKEDGNKRKLKKSAKWFAKF 541
>pdb|2DGA|A Chain A, Crystal Structure Of Hexameric Beta-Glucosidase In Wheat
pdb|3AIQ|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With An Aglycone Dimboa
pdb|3AIR|A Chain A, Crystal Structure Of Beta-Glucosidase In Wheat Complexed
With 2-Deoxy- 2-Fluoroglucoside And Dinitrophenol
Length = 565
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/408 (44%), Positives = 265/408 (64%), Gaps = 4/408 (0%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
+KDMGM YRFSI+WSRI P+GTG++NQAG+D+YNKLI++L+ I PYVT++HWD PQA
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA 196
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+DKY G+L+RQI++D+ +AE CF+ FGDRVK+W TFNEPHT+ Y G+ APGRCS
Sbjct: 197 LEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNEPHTYCCFSYGEGIHAPGRCS 256
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ G+S EPY H+ LL HA+ +++ +Y +G+AFDV+ YE +
Sbjct: 257 PGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQD 316
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
S D +A +R+ D+ +GWFL+P++ GDYP SMR+ +G RLP FT E L S D +G+
Sbjct: 317 SFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMGL 376
Query: 241 NHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
N+YT+ +++ + + LN A A + T +G I + W+Y+ P+G+ L
Sbjct: 377 NYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTG-SDGNDIGPITGTYWIYMYPKGLTDL 435
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+ +K+KY NP V ITENG+ D + + L D KR+ Y +++ + AI + G +
Sbjct: 436 LLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYLQRHISAVKDAIDQ-GAD 493
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNF 407
V+G+F W L+DN+EW+ GY+SRFGL ++D D KR K S +WF F
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|3AIS|A Chain A, Crystal Structure Of A Mutant Beta-Glucosidase In Wheat
Complexed With Dimboa-Glc
Length = 565
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/408 (44%), Positives = 264/408 (64%), Gaps = 4/408 (0%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
+KDMGM YRFSI+WSRI P+GTG++NQAG+D+YNKLI++L+ I PYVT++HWD PQA
Sbjct: 137 LKDMGMKVYRFSISWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWDTPQA 196
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+DKY G+L+RQI++D+ +AE CF+ FGDRVK+W TFN PHT+ Y G+ APGRCS
Sbjct: 197 LEDKYGGFLNRQIVDDYKQFAEVCFKNFGDRVKNWFTFNAPHTYCCFSYGEGIHAPGRCS 256
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ G+S EPY H+ LL HA+ +++ +Y +G+AFDV+ YE +
Sbjct: 257 PGMDCAVPEGDSLREPYTAGHHILLAHAEAVQLFKARYNMHGDSKIGMAFDVMGYEPYQD 316
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
S D +A +R+ D+ +GWFL+P++ GDYP SMR+ +G RLP FT E L S D +G+
Sbjct: 317 SFLDDQARERSIDYNMGWFLEPVVRGDYPFSMRSLIGDRLPMFTKEEQEKLASSCDIMGL 376
Query: 241 NHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
N+YT+ +++ + + LN A A + T +G I + W+Y+ P+G+ L
Sbjct: 377 NYYTSRFSKHVDMSPDFTPTLNTDDAYASSETTG-SDGNDIGPITGTYWIYMYPKGLTDL 435
Query: 300 MNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCN 359
+ +K+KY NP V ITENG+ D + + L D KR+ Y +++ + AI + G +
Sbjct: 436 LLIMKEKYGNPPVFITENGIADVEGDES-MPDPLDDWKRLDYLQRHISAVKDAIDQ-GAD 493
Query: 360 VKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNF 407
V+G+F W L+DN+EW+ GY+SRFGL ++D D KR K S +WF F
Sbjct: 494 VRGHFTWGLIDNFEWSLGYSSRFGLVYIDKNDGNKRKLKKSAKWFSKF 541
>pdb|2JF6|A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF6|B Chain B, Structure Of Inactive Mutant Of Strictosidine Glucosidase
In Complex With Strictosidine
pdb|2JF7|A Chain A, Structure Of Strictosidine Glucosidase
pdb|2JF7|B Chain B, Structure Of Strictosidine Glucosidase
Length = 532
Score = 373 bits (958), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/410 (45%), Positives = 253/410 (61%), Gaps = 11/410 (2%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
MK G+++YRFSI+WSR+ P G +N+ GV Y+ ID LLA GI+P VTL+HWDLP
Sbjct: 106 MKQTGLESYRFSISWSRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWDLP 165
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL+D+Y G+L +I++DF YAE CF +FGD++K+W TFNEPHTF + GY +G APGR
Sbjct: 166 QALEDEYGGFLSHRIVDDFCEYAEFCFWEFGDKIKYWTTFNEPHTFAVNGYALGEFAPGR 225
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
G+ A EPY+V HN LL H + YR K++ Q G +GI + +W E
Sbjct: 226 GGK-----GDEGDPAIEPYVVTHNILLAHKAAVEEYRNKFQKCQEGEIGIVLNSMWMEPL 280
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
S+ D +A +RA DF LGWFL+PL GDYP SMR V RLP+F++ ++ LKG DF+
Sbjct: 281 SDVQADIDAQKRALDFMLGWFLEPLTTGDYPKSMRELVKGRLPKFSADDSEKLKGCYDFI 340
Query: 239 GINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRS 298
G+N+YT Y NA L+ D T +N KPI W ++VP G+
Sbjct: 341 GMNYYTATYVT-NAVKSNSEKLSYETDDQVTKTFE-RNQKPIGHALYGGWQHVVPWGLYK 398
Query: 299 LMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGC 358
L+ Y K+ Y P + +TE+GM + N EA +D +R YH +L ++ AI +DG
Sbjct: 399 LLVYTKETYHVPVLYVTESGMVEENKTKILLSEARRDAERTDYHQKHLASVRDAI-DDGV 457
Query: 359 NVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
NVKGYFVWS DN+EW GY R+G+ VDYK + RYPK S W+KNF+
Sbjct: 458 NVKGYFVWSFFDNFEWNLGYICRYGIIHVDYKSFE-RYPKESAIWYKNFI 506
>pdb|1HXJ|A Chain A, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
pdb|1HXJ|B Chain B, Crystal Structure Of The Maize Zm-P60.1 Beta-Glucosidase
Length = 507
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 264/423 (62%), Gaps = 17/423 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN G+ +Y LI+ LL GIEPYVT++HWD+P
Sbjct: 82 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 141
Query: 59 QALDDKYKGWLDRQ---IINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQA 115
QAL++KY G+LD+ I+ D+ +A+ CF FGD+VK+W+TFNEP TFT Y G+ A
Sbjct: 142 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 201
Query: 116 PGRCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWY 175
PGRCS L GNS EPY HN LL HA+ D+Y K YK + +G+AFDV+
Sbjct: 202 PGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGR 260
Query: 176 ESASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSL 235
S D +A +R+ D LGWFL+P++ GDYP SMR+ RLP F + L GS
Sbjct: 261 VPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSY 320
Query: 236 DFVGINHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
+ +G+N+YT+ +++ + + VLN A A + + +GKPI + W+Y+ P
Sbjct: 321 NMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYA-SQEVNGPDGKPIGPPMGNPWIYMYPE 379
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFT--PTKEALKDDKRIKYHNDYLTNLLAA 352
G++ L+ +K KY NP + ITENG+ D + + T P + AL D KR+ DY+ +A
Sbjct: 380 GLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRL----DYIQRHIAT 435
Query: 353 IKED---GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
+KE G NV+GYF WSLLDN+EW AG+T R+G+ +VD +N RY K S +W K F
Sbjct: 436 LKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNT 495
Query: 410 STK 412
+ K
Sbjct: 496 AKK 498
>pdb|1E1E|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1E|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase
pdb|1E1F|A Chain A, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
pdb|1E1F|B Chain B, Crystal Structure Of A Monocot (Maize Zmglu1)
Beta-Glucosidase In Complex With
P-Nitrophenyl-Beta-D-Thioglucoside
Length = 512
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/423 (45%), Positives = 264/423 (62%), Gaps = 17/423 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN G+ +Y LI+ LL GIEPYVT++HWD+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 QALDDKYKGWLDRQ---IINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQA 115
QAL++KY G+LD+ I+ D+ +A+ CF FGD+VK+W+TFNEP TFT Y G+ A
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNEPQTFTSFSYGTGVFA 206
Query: 116 PGRCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWY 175
PGRCS L GNS EPY HN LL HA+ D+Y K YK + +G+AFDV+
Sbjct: 207 PGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGR 265
Query: 176 ESASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSL 235
S D +A +R+ D LGWFL+P++ GDYP SMR+ RLP F + L GS
Sbjct: 266 VPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSY 325
Query: 236 DFVGINHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
+ +G+N+YT+ +++ + + VLN A A + + +GKPI + W+Y+ P
Sbjct: 326 NMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYA-SQEVNGPDGKPIGPPMGNPWIYMYPE 384
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFT--PTKEALKDDKRIKYHNDYLTNLLAA 352
G++ L+ +K KY NP + ITENG+ D + + T P + AL D KR+ DY+ +A
Sbjct: 385 GLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRL----DYIQRHIAT 440
Query: 353 IKED---GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
+KE G NV+GYF WSLLDN+EW AG+T R+G+ +VD +N RY K S +W K F
Sbjct: 441 LKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNT 500
Query: 410 STK 412
+ K
Sbjct: 501 AKK 503
>pdb|1H49|A Chain A, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
pdb|1H49|B Chain B, Crystal Structure Of The Inactive Double Mutant Of The
Maize Beta-Glucosidase Zmglu1-E191d-F198v In Complex
With Dimboa-Glucoside
Length = 512
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 264/423 (62%), Gaps = 17/423 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN G+ +Y LI+ LL GIEPYVT++HWD+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 QALDDKYKGWLDRQ---IINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQA 115
QAL++KY G+LD+ I+ D+ +A+ CF FGD+VK+W+TFN+P TFT Y G+ A
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSVSYGTGVFA 206
Query: 116 PGRCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWY 175
PGRCS L GNS EPY HN LL HA+ D+Y K YK + +G+AFDV+
Sbjct: 207 PGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGR 265
Query: 176 ESASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSL 235
S D +A +R+ D LGWFL+P++ GDYP SMR+ RLP F + L GS
Sbjct: 266 VPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSY 325
Query: 236 DFVGINHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
+ +G+N+YT+ +++ + + VLN A A + + +GKPI + W+Y+ P
Sbjct: 326 NMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYA-SQEVNGPDGKPIGPPMGNPWIYMYPE 384
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFT--PTKEALKDDKRIKYHNDYLTNLLAA 352
G++ L+ +K KY NP + ITENG+ D + + T P + AL D KR+ DY+ +A
Sbjct: 385 GLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRL----DYIQRHIAT 440
Query: 353 IKED---GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
+KE G NV+GYF WSLLDN+EW AG+T R+G+ +VD +N RY K S +W K F
Sbjct: 441 LKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNT 500
Query: 410 STK 412
+ K
Sbjct: 501 AKK 503
>pdb|1E4L|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4L|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zm Glu191asp
pdb|1E4N|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E4N|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglu E191d In Complex With The
Natural Aglycone Dimboa
pdb|1E55|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E55|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Competitive Inhibitor Dhurrin
pdb|1E56|A Chain A, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1E56|B Chain B, Crystal Structure Of The Inactive Mutant Monocot (Maize
Zmglu1) Beta-Glucosidase Zmglue191d In Complex With The
Natural Substrate Dimboa-Beta-D-Glucoside
pdb|1V08|A Chain A, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
pdb|1V08|B Chain B, Crystal Structure Of The Zea Maze Beta-Glucosidase-1 In
Complex With Gluco-Tetrazole
Length = 512
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/423 (44%), Positives = 264/423 (62%), Gaps = 17/423 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN G+ +Y LI+ LL GIEPYVT++HWD+P
Sbjct: 87 LKEMGMDAYRFSISWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWDVP 146
Query: 59 QALDDKYKGWLDRQ---IINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQA 115
QAL++KY G+LD+ I+ D+ +A+ CF FGD+VK+W+TFN+P TFT Y G+ A
Sbjct: 147 QALEEKYGGFLDKSHKSIVEDYTYFAKVCFDNFGDKVKNWLTFNDPQTFTSFSYGTGVFA 206
Query: 116 PGRCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWY 175
PGRCS L GNS EPY HN LL HA+ D+Y K YK + +G+AFDV+
Sbjct: 207 PGRCSPGLDCAYPTGNSLVEPYTAGHNILLAHAEAVDLYNKHYK-RDDTRIGLAFDVMGR 265
Query: 176 ESASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSL 235
S D +A +R+ D LGWFL+P++ GDYP SMR+ RLP F + L GS
Sbjct: 266 VPYGTSFLDKQAEERSWDINLGWFLEPVVRGDYPFSMRSLARERLPFFKDEQKEKLAGSY 325
Query: 236 DFVGINHYTTFYAQR-NATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
+ +G+N+YT+ +++ + + VLN A A + + +GKPI + W+Y+ P
Sbjct: 326 NMLGLNYYTSRFSKNIDISPNYSPVLNTDDAYA-SQEVNGPDGKPIGPPMGNPWIYMYPE 384
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFT--PTKEALKDDKRIKYHNDYLTNLLAA 352
G++ L+ +K KY NP + ITENG+ D + + T P + AL D KR+ DY+ +A
Sbjct: 385 GLKDLLMIMKNKYGNPPIYITENGIGDVDTKETPLPMEAALNDYKRL----DYIQRHIAT 440
Query: 353 IKED---GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
+KE G NV+GYF WSLLDN+EW AG+T R+G+ +VD +N RY K S +W K F
Sbjct: 441 LKESIDLGSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNT 500
Query: 410 STK 412
+ K
Sbjct: 501 AKK 503
>pdb|1V02|E Chain E, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/415 (45%), Positives = 258/415 (62%), Gaps = 6/415 (1%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN+ V++YNKLID LL GIEPY+T++HWD P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL D Y G+LD +II D+ +A+ CF+KFG +VK+W+TFNEP TF Y G+ APGR
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKKVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + GNS +EPYIVAHN L HA+ DIY K +K G +G+A +V
Sbjct: 259 CSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGAD-GRIGLALNVFGRVPY 317
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
+N+ D +A +R+ D LGWFL+P++ GDYP SMR R+P F E L GS D +
Sbjct: 318 TNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMI 377
Query: 239 GINHYT-TFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMR 297
GIN+YT TF + + VLN A A T +G I + W+ + P+G+
Sbjct: 378 GINYYTSTFSKHIDLSPNNSPVLNTDDAYASQET-KGPDGNAIGPPTGNAWINMYPKGLH 436
Query: 298 SLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
++ +K KY NP + ITENGM D + P AL+D R+ Y +L+ L +I + G
Sbjct: 437 DILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLG 495
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNSTK 412
+V+GYF WSLLDN+EW++GYT RFG+ +VD ++ +R K S +W + F + K
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAK 550
>pdb|1V03|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 360 bits (924), Expect = e-100, Method: Compositional matrix adjust.
Identities = 188/415 (45%), Positives = 258/415 (62%), Gaps = 6/415 (1%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN+ GV++YNKLID LL GIEPY+T++HWD P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKGVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL + Y G+LD +II D+ +A+ CF+KFG VK+W+TFN+P TF Y G+ APGR
Sbjct: 199 QALVEAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNDPETFCSVSYGTGVLAPGR 258
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + GNS +EPYIVAHN L HA+ DIY K +K G +G+A +V
Sbjct: 259 CSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGAD-GRIGLALNVFGRVPY 317
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
+N+ D +A +R+ D LGWFL+P++ GDYP SMR R+P F E L GS D +
Sbjct: 318 TNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMI 377
Query: 239 GINHYT-TFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMR 297
GIN+YT TF + + VLN A A T +G I + W+ + P+G+
Sbjct: 378 GINYYTSTFSKHIDLSPNNSPVLNTDDAYASQET-KGPDGNAIGPPTGNAWINMYPKGLH 436
Query: 298 SLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
++ +K KY NP + ITENGM D + P AL+D R+ Y +L+ L +I + G
Sbjct: 437 DILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLG 495
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNSTK 412
+V+GYF WSLLDN+EW++GYT RFG+ +VD ++ +R K S +W + F + K
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAK 550
>pdb|1V02|A Chain A, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|B Chain B, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|C Chain C, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|D Chain D, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
pdb|1V02|F Chain F, Crystal Structure Of The Sorghum Bicolor Dhurrinase 1
Length = 565
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 189/415 (45%), Positives = 257/415 (61%), Gaps = 6/415 (1%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K+MGMDAYRFSI+W RI P GT G IN+ V++YNKLID LL GIEPY+T++HWD P
Sbjct: 139 LKEMGMDAYRFSISWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWDTP 198
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
QAL D Y G+LD +II D+ +A+ CF+KFG VK+W+TFNEP TF Y G+ APGR
Sbjct: 199 QALVDAYGGFLDERIIKDYTDFAKVCFEKFGKTVKNWLTFNEPETFCSVSYGTGVLAPGR 258
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + GNS +EPYIVAHN L HA+ DIY K +K G +G+A +V
Sbjct: 259 CSPGVSCAVPTGNSLSEPYIVAHNLLRAHAETVDIYNKYHKGAD-GRIGLALNVFGRVPY 317
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFV 238
+N+ D +A +R+ D LGWFL+P++ GDYP SMR R+P F E L GS D +
Sbjct: 318 TNTFLDQQAQERSMDKCLGWFLEPVVRGDYPFSMRVSARDRVPYFKEKEQEKLVGSYDMI 377
Query: 239 GINHYT-TFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMR 297
GIN+YT TF + + VLN A A T +G I + W+ + P+G+
Sbjct: 378 GINYYTSTFSKHIDLSPNNSPVLNTDDAYASQET-KGPDGNAIGPPTGNAWINMYPKGLH 436
Query: 298 SLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
++ +K KY NP + ITENGM D + P AL+D R+ Y +L+ L +I + G
Sbjct: 437 DILMTMKNKYGNPPMYITENGMGDIDKGDLPKPVALEDHTRLDYIQRHLSVLKQSI-DLG 495
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNSTK 412
+V+GYF WSLLDN+EW++GYT RFG+ +VD ++ +R K S +W + F + K
Sbjct: 496 ADVRGYFAWSLLDNFEWSSGYTERFGIVYVDRENGCERTMKRSARWLQEFNGAAK 550
>pdb|1MYR|A Chain A, Myrosinase From Sinapis Alba
Length = 501
Score = 355 bits (911), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 189/421 (44%), Positives = 267/421 (63%), Gaps = 18/421 (4%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+ ++ YRFSIAWSRI P G + +NQ G+D+Y+ LID L+ KGI P+VTL+HWDLP
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNQKGIDYYHGLIDGLIKKGITPFVTLFHWDLP 145
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
Q L D+Y+G+LD QII+DF YA+ CF++FGD VK+W+T N+ ++ +GY L APGR
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + C AGNS+TEPYIVAH+ LL HAKV D+YRK Y QGG +G W+
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPY 264
Query: 179 SNSTEDA-EATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDF 237
+++ + AT+R + F LGWF+ PL G YP M + VG+RLP F+ E L+KGS DF
Sbjct: 265 NDTDRHSIAATERMKQFFLGWFMGPLTNGTYPQIMIDTVGARLPTFSPEETNLVKGSYDF 324
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGA-LTIPFKNGKPI--------ADRANSIW 288
+G+N+Y T YAQ + N + + ++ DAGA LT +G I D +++I+
Sbjct: 325 LGLNYYFTQYAQP-SPNPVNATNHTAMMDAGAKLTYINASGHYIGPLFESDGGDGSSNIY 383
Query: 289 LYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTN 348
Y P+G+ S+M+Y K KY NP + +TENG+ P + KE++ D RI Y +L
Sbjct: 384 YY--PKGIYSVMDYFKNKYYNPLIYVTENGISTPGSE--NRKESMLDYTRIDYLCSHLCF 439
Query: 349 LLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
L IKE NVKGY W+L DN+E+ G+T RFGL ++++ + R K S QW++ F+
Sbjct: 440 LNKVIKEKDVNVKGYLAWALGDNYEFNNGFTVRFGLSYINWNNVTDRDLKKSGQWYQKFI 499
Query: 409 N 409
+
Sbjct: 500 S 500
>pdb|1DWA|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 1:
Structure Prior To Irradiation
pdb|1DWF|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 2:
Structure After Irradiation With 9.110e15 PhotonsMM2
pdb|1DWG|M Chain M, Study On Radiation Damage On A Cryocooled Crystal: Part 3
Structure After Irradiation With 18.210e15 PhotonsMM2.
pdb|1DWH|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 4:
Structure After Irradiation With 27.210e15 PhotonsMM2
pdb|1DWI|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Part 5:
Structure After Irradiation With 54.010e15 PhotonsMM2
pdb|1DWJ|M Chain M, Study On Radiation Damage On A Cryocooled Crystal. Refined
Part 6: Structure After A Radiation Dose Of 5410e15
PhotonsMM2
Length = 499
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 266/419 (63%), Gaps = 14/419 (3%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+ ++ YRFSIAWSRI P G + +N+ G+D+Y+ LI L+ KGI P+VTL+HWDLP
Sbjct: 84 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 143
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
Q L D+Y+G+LD QII+DF YA+ CF++FGD VK+W+T N+ ++ +GY L APGR
Sbjct: 144 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 203
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + C AGNS+TEPYIVAH+ LL HAKV D+YRK Y QGG +G W+
Sbjct: 204 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPY 262
Query: 179 SNSTEDA-EATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDF 237
+++ + AT+R ++F LGWF+ PL G YP M + VG RLP F+ E+ L+KGS DF
Sbjct: 263 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 322
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGA-LTIPFKNGKPIA-----DRANSI-WLY 290
+G+N+Y T YAQ + N + + ++ DAGA LT +G I D+A+S +Y
Sbjct: 323 LGLNYYFTQYAQP-SPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIY 381
Query: 291 IVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLL 350
P+G+ S+M+Y K KY NP + +TENG+ P + +++ D RI Y +L L
Sbjct: 382 YYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDE--NRNQSMLDYTRIDYLCSHLCFLN 439
Query: 351 AAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
IKE NVKGY W+L DN+E+ G+T RFGL ++D+ + R K S QW++ F++
Sbjct: 440 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQTFIS 498
>pdb|1E6Q|M Chain M, Myrosinase From Sinapis Alba With The Bound Transition
State Analogue Gluco-Tetrazole
pdb|1E6X|M Chain M, Myrosinase From Sinapis Alba With A Bound Transition State
Analogue,D-Glucono-1,5-Lactone
pdb|1E70|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba
pdb|1E71|M Chain M, Myrosinase From Sinapis Alba With Bound Ascorbate
pdb|1E72|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate Or Ascorbate
pdb|1E73|M Chain M, 2-F-Glucosylated Myrosinase From Sinapis Alba With Bound
L-Ascorbate
pdb|1E6S|M Chain M, Myrosinase From Sinapis Alba With Bound
Gluco-Hydroximolactam And Sulfate
pdb|1E4M|M Chain M, Myrosinase From Sinapis Alba
pdb|1W9B|M Chain M, S. Alba Myrosinase In Complex With Carba-Glucotropaeolin
pdb|1W9D|M Chain M, S. Alba Myrosinase In Complex With S-Ethyl
Phenylacetothiohydroximate-O-Sulfate
pdb|2WXD|M Chain M, A Micromolar O-Sulfated Thiohydroximate Inhibitor Bound To
Plant Myrosinase
Length = 501
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 187/419 (44%), Positives = 267/419 (63%), Gaps = 14/419 (3%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+ ++ YRFSIAWSRI P G + +N+ G+D+Y+ LI L+ KGI P+VTL+HWDLP
Sbjct: 86 LDELNATGYRFSIAWSRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWDLP 145
Query: 59 QALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGR 118
Q L D+Y+G+LD QII+DF YA+ CF++FGD VK+W+T N+ ++ +GY L APGR
Sbjct: 146 QTLQDEYEGFLDPQIIDDFKDYADLCFEEFGDSVKYWLTINQLYSVPTRGYGSALDAPGR 205
Query: 119 CSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESA 178
CS + C AGNS+TEPYIVAH+ LL HAKV D+YRK Y QGG +G W+
Sbjct: 206 CSPTVDPSCYAGNSSTEPYIVAHHQLLAHAKVVDLYRKNY-THQGGKIGPTMITRWFLPY 264
Query: 179 SNSTEDA-EATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDF 237
+++ + AT+R ++F LGWF+ PL G YP M + VG RLP F+ E+ L+KGS DF
Sbjct: 265 NDTDRHSIAATERMKEFFLGWFMGPLTNGTYPQIMIDTVGERLPSFSPEESNLVKGSYDF 324
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGA-LTIPFKNGKPIA-----DRANSI-WLY 290
+G+N+Y T YAQ + N + + ++ DAGA LT +G I D+A+S +Y
Sbjct: 325 LGLNYYFTQYAQP-SPNPVNSTNHTAMMDAGAKLTYINASGHYIGPLFEKDKADSTDNIY 383
Query: 291 IVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLL 350
P+G+ S+M+Y K KY NP + +TENG+ P + +++ D RI Y +L L
Sbjct: 384 YYPKGIYSVMDYFKNKYYNPLIYVTENGISTPGDE--NRNQSMLDYTRIDYLCSHLCFLN 441
Query: 351 AAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
IKE NVKGY W+L DN+E+ G+T RFGL ++D+ + R K S QW+++F++
Sbjct: 442 KVIKEKDVNVKGYLAWALGDNYEFNKGFTVRFGLSYIDWNNVTDRDLKKSGQWYQSFIS 500
>pdb|2E3Z|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E3Z|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Substrate-Free Form
pdb|2E40|A Chain A, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
pdb|2E40|B Chain B, Crystal Structure Of Intracellular Family 1 Beta-
Glucosidase Bgl1a From The Basidiomycete Phanerochaete
Chrysosporium In Complex With Gluconolactone
Length = 465
Score = 340 bits (873), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 178/417 (42%), Positives = 245/417 (58%), Gaps = 29/417 (6%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNG--TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K G+ AYRFS++WSRI P G + +N AG+ HY LI+ L+ +GI P+VTLYHWDLP
Sbjct: 71 LKSYGVKAYRFSLSWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWDLP 130
Query: 59 QALDDKYKGWLDRQ-IINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPG 117
QALDD+Y GWL+++ I DF YA+ CF+ FGD V++WITFNEP ++ GY G+ APG
Sbjct: 131 QALDDRYGGWLNKEEAIQDFTNYAKLCFESFGDLVQNWITFNEPWVISVMGYGNGIFAPG 190
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYES 177
S TEP+IV+H+ +L HA +YR ++K KQGG +GI D W
Sbjct: 191 HVS------------NTEPWIVSHHIILAHAHAVKLYRDEFKEKQGGQIGITLDSHWLIP 238
Query: 178 ASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDF 237
++ EAT RA +F+LG F +P+ G+YP ++ +G RLP FT E L+KGS DF
Sbjct: 239 YDDTDASKEATLRAMEFKLGRFANPIYKGEYPPRIKKILGDRLPEFTPEEIELVKGSSDF 298
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMR 297
G+N YTT Q ++ + + A +G + +++ WL G R
Sbjct: 299 FGLNTYTTHLVQDGGSDELAGFVKTGHTRA--------DGTQLGTQSDMGWLQTYGPGFR 350
Query: 298 SLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
L+NY+ + Y P V +TENG P ++A+ D R Y+ DY LL A+ EDG
Sbjct: 351 WLLNYLWKAYDKP-VYVTENGFPVKGENDLPVEQAVDDTDRQAYYRDYTEALLQAVTEDG 409
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQ----WFKNFLNS 410
+V+GYF WSLLDN+EWA GY RFG+ VDY + QKR PK S + WFK +
Sbjct: 410 ADVRGYFGWSLLDNFEWAEGYKVRFGVTHVDY-ETQKRTPKKSAEFLSRWFKEHIEE 465
>pdb|3AHY|A Chain A, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|B Chain B, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|C Chain C, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
pdb|3AHY|D Chain D, Crystal Structure Of Beta-Glucosidase 2 From Fungus
Trichoderma Reesei In Complex With Tris
Length = 473
Score = 322 bits (826), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/415 (40%), Positives = 239/415 (57%), Gaps = 22/415 (5%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT--GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLP 58
+K +G +YRFSI+WSRI P G +NQAG+DHY K +D LL GI P++TL+HWDLP
Sbjct: 71 LKSLGAKSYRFSISWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWDLP 130
Query: 59 QALDDKYKGWLDR-QIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPG 117
+ L +Y G L+R + DF YA F+ +V++WITFNEP I GY G APG
Sbjct: 131 EGLHQRYGGLLNRTEFPLDFENYARVMFRAL-PKVRNWITFNEPLCSAIPGYGSGTFAPG 189
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQG-GSLGIAFDVIW-Y 175
R S +EP+ V HN L+ H + YR +K G G +GI + + Y
Sbjct: 190 R------------QSTSEPWTVGHNILVAHGRAVKAYRDDFKPASGDGQIGIVLNGDFTY 237
Query: 176 ESASNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSL 235
+ D EA +R +F WF DP+ GDYP+SMR ++G RLP FT E AL+ GS
Sbjct: 238 PWDAADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSN 297
Query: 236 DFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRG 295
DF G+NHYT+ Y + ++ +D++ + L K G I S WL G
Sbjct: 298 DFYGMNHYTSNYIRHRSSP---ASADDTVGNVDVL-FTNKQGNCIGPETQSPWLRPCAAG 353
Query: 296 MRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
R + +I ++Y P + +TENG P ++ L+DD R+KY+N+Y+ ++ A++
Sbjct: 354 FRDFLVWISKRYGYPPIYVTENGTSIKGESDLPKEKILEDDFRVKYYNEYIRAMVTAVEL 413
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
DG NVKGYF WSL+DN+EWA GY +RFG+ +VDY++ QKR+PK S + K +
Sbjct: 414 DGVNVKGYFAWSLMDNFEWADGYVTRFGVTYVDYENGQKRFPKKSAKSLKPLFDE 468
>pdb|4GXP|A Chain A, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|B Chain B, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
pdb|4GXP|C Chain C, Chimeric Family 1 Beta-Glucosidase Made With
Non-Contiguous Schema
Length = 467
Score = 316 bits (810), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/411 (42%), Positives = 238/411 (57%), Gaps = 28/411 (6%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
++ +G+ AYRFSI+W RI P GTG++NQ G+D YN++ID LL KGI P+VT++HWDLP A
Sbjct: 75 IEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIFHWDLPFA 134
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L K G L+R+I + FA Y+ F+ FGDRVK+WITFNEP I GY G APGR
Sbjct: 135 LQLK-GGLLNREIADWFAEYSRVLFENFGDRVKNWITFNEPLCSAIPGYGSGTFAPGR-- 191
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIW-YESAS 179
S +EP+ V HN L+ H + ++R+ K G +GI + + Y +
Sbjct: 192 ----------QSTSEPWTVGHNILVAHGRAVKVFRETVK---DGKIGIVLNGDFTYPWDA 238
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
D EA +R +F WF DP+ GDYP+SMR ++G RLP FT E AL+ GS DF G
Sbjct: 239 ADPADKEAAERRLEFFTAWFADPIYLGDYPASMRKQLGDRLPTFTPEERALVHGSNDFYG 298
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
+NHYT+ Y + ++ +D++ + L K G I WL G R
Sbjct: 299 MNHYTSNYIRHRSSP---ASADDTVGNVDVL-FTNKQGNCIGPETAMPWLRPCAAGFRDF 354
Query: 300 MNYIKQKYRNPTVIITENG--MDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
+ +I ++Y P + +TENG DD + D RI Y Y+ ++ A++ DG
Sbjct: 355 LVWISKRYGYPPIYVTENGAAFDD----VVSEDGRVHDQNRIDYLKAYIGAMVTAVELDG 410
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
NVKGYFVWSLLDN+EWA GY+ RFG+ +VDY QKR K+S W+ N +
Sbjct: 411 VNVKGYFVWSLLDNFEWAEGYSKRFGIVYVDYS-TQKRIVKDSGYWYSNVV 460
>pdb|3AHZ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Tris
pdb|3VIF|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Gluconolactone
pdb|3VIG|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With 1-Deoxynojirimycin
pdb|3VIH|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glycerol
pdb|3VII|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Bis-Tris
Length = 487
Score = 298 bits (762), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/428 (39%), Positives = 239/428 (55%), Gaps = 46/428 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQI-NQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K++G YRFSI+W+R+ P G I NQ G+D+YN LI+ LLA GIEP VT+YHWDLPQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGY--DVGLQAPG 117
AL D GW + + YA F+ FGDRVK W+TFNEP TF + GY ++G+ AP
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNEPLTF-MDGYASEIGM-APS 191
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYES 177
Y+ AH + HA++ +Y ++++A+QGG +GI+ ++ W E
Sbjct: 192 -----------INTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 178 ASNSTEDAEATQRAQDFQLGWFLDPLMF--GDYPSSMRNRVG----------SRLPRFTS 225
A+NS ED + + Q F LG + P+ GDYP+ +++RV SRLP+FT+
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 226 SEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
E ++G+ DF+GIN YT + DS + + PI+
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS-----GVILTQDAAWPIS---A 352
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
S WL +VP G R +N+IK +Y NP V ITENG D L D R+ Y+ ++
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG--------GLNDTGRVHYYTEH 404
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQWF 404
L +L AI EDG NV GY WSL+DN+EW GY+ +FG+Y VD++D + R PK S +
Sbjct: 405 LKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVL 464
Query: 405 KNFLNSTK 412
+N+ K
Sbjct: 465 AEIMNTRK 472
>pdb|3AI0|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With
Para-Nitrophenyl-Beta-D-Glucopyranoside
pdb|3VIM|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIN|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIO|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
pdb|3VIP|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With A New
Glucopyranosidic Product
Length = 487
Score = 296 bits (758), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 239/428 (55%), Gaps = 46/428 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQI-NQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K++G YRFSI+W+R+ P G I NQ G+D+YN LI+ LLA GIEP VT+YHWDLPQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGY--DVGLQAPG 117
AL D GW + + YA F+ FGDRVK W+TFN+P TF + GY ++G+ AP
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNDPLTF-MDGYASEIGM-APS 191
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYES 177
Y+ AH + HA++ +Y ++++A+QGG +GI+ ++ W E
Sbjct: 192 -----------INTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 178 ASNSTEDAEATQRAQDFQLGWFLDPLMF--GDYPSSMRNRVG----------SRLPRFTS 225
A+NS ED + + Q F LG + P+ GDYP+ +++RV SRLP+FT+
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 226 SEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
E ++G+ DF+GIN YT + DS + + PI+
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS-----GVILTQDAAWPIS---A 352
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
S WL +VP G R +N+IK +Y NP V ITENG D L D R+ Y+ ++
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG--------GLNDTGRVHYYTEH 404
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQWF 404
L +L AI EDG NV GY WSL+DN+EW GY+ +FG+Y VD++D + R PK S +
Sbjct: 405 LKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVL 464
Query: 405 KNFLNSTK 412
+N+ K
Sbjct: 465 AEIMNTRK 472
>pdb|3VIK|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Cellobiose
pdb|3VIL|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Salicin
Length = 487
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 238/428 (55%), Gaps = 46/428 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQI-NQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K++G YRFSI+W+R+ P G I NQ G+D+YN LI+ LLA GIEP VT+YHWDLPQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGY--DVGLQAPG 117
AL D GW + + YA F+ FGDRVK W+TFN P TF + GY ++G+ AP
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNSPLTF-MDGYASEIGM-APS 191
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYES 177
Y+ AH + HA++ +Y ++++A+QGG +GI+ ++ W E
Sbjct: 192 -----------INTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 178 ASNSTEDAEATQRAQDFQLGWFLDPLMF--GDYPSSMRNRVG----------SRLPRFTS 225
A+NS ED + + Q F LG + P+ GDYP+ +++RV SRLP+FT+
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 226 SEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
E ++G+ DF+GIN YT + DS + + PI+
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS-----GVILTQDAAWPIS---A 352
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
S WL +VP G R +N+IK +Y NP V ITENG D L D R+ Y+ ++
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG--------GLNDTGRVHYYTEH 404
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQWF 404
L +L AI EDG NV GY WSL+DN+EW GY+ +FG+Y VD++D + R PK S +
Sbjct: 405 LKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVL 464
Query: 405 KNFLNSTK 412
+N+ K
Sbjct: 465 AEIMNTRK 472
>pdb|3VIJ|A Chain A, Crystal Structure Of Beta-Glucosidase From Termite
Neotermes Koshunensis In Complex With Glucose
Length = 487
Score = 295 bits (756), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 238/428 (55%), Gaps = 46/428 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQI-NQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K++G YRFSI+W+R+ P G I NQ G+D+YN LI+ LLA GIEP VT+YHWDLPQ
Sbjct: 75 LKELGAQVYRFSISWARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHWDLPQ 134
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGY--DVGLQAPG 117
AL D GW + + YA F+ FGDRVK W+TFN P TF + GY ++G+ AP
Sbjct: 135 ALQD-LGGWPNLVLAKYSENYARVLFKNFGDRVKLWLTFNAPLTF-MDGYASEIGM-APS 191
Query: 118 RCSILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYES 177
Y+ AH + HA++ +Y ++++A+QGG +GI+ ++ W E
Sbjct: 192 -----------INTPGIGDYLAAHTVIHAHARIYHLYDQEFRAEQGGKVGISLNINWCEP 240
Query: 178 ASNSTEDAEATQRAQDFQLGWFLDPLMF--GDYPSSMRNRVG----------SRLPRFTS 225
A+NS ED + + Q F LG + P+ GDYP+ +++RV SRLP+FT+
Sbjct: 241 ATNSAEDRASCENYQQFNLGLYAHPIFTEEGDYPAVLKDRVSRNSADEGYTDSRLPQFTA 300
Query: 226 SEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
E ++G+ DF+GIN YT + DS + + PI+
Sbjct: 301 EEVEYIRGTHDFLGINFYTALLGKSGVEGYEPSRYRDS-----GVILTQDAAWPIS---A 352
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
S WL +VP G R +N+IK +Y NP V ITENG D L D R+ Y+ ++
Sbjct: 353 SSWLKVVPWGFRKELNWIKNEYNNPPVFITENGFSDYG--------GLNDTGRVHYYTEH 404
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQWF 404
L +L AI EDG NV GY WSL+DN+EW GY+ +FG+Y VD++D + R PK S +
Sbjct: 405 LKEMLKAIHEDGVNVIGYTAWSLMDNFEWLRGYSEKFGIYAVDFEDPARPRIPKESAKVL 464
Query: 405 KNFLNSTK 412
+N+ K
Sbjct: 465 AEIMNTRK 472
>pdb|2E9L|A Chain A, Crystal Structure Of Human Cytosolic Neutral
Beta-Glycosylceramidase (Klotho-Related Prote:klrp)
Complex With Glucose And Fatty Acids
pdb|2E9M|A Chain A, Crystal Structure Of Human Cytosolic Neutral Beta-
Glycosylceramidase (Klotho-Related Prote:klrp) Complex
With Galactose And Fatty Acids
Length = 469
Score = 286 bits (731), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 229/418 (54%), Gaps = 45/418 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT-GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K +G+ YRFS++WSR+ P+GT G INQ G+D+YNK+ID LL G+ P VTLYH+DLPQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRC 119
L+D+ GWL II F YA+ CF FGDRVK WIT NE + ++ YD+G+ PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG-- 182
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
+ H T Y AHN + HA+ Y ++ KQ G + ++ +W E A
Sbjct: 183 --IPHF-------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPAD 233
Query: 180 -NSTEDAEATQRAQDFQLGWFLDPLMF-GDYPSSMRNRVG----------SRLPRFTSSE 227
NS D EA +RA F L F P+ GDYP +++++ SRLP FT E
Sbjct: 234 PNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEE 293
Query: 228 AALLKGSLDFVGINHYTT--FYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
++KG+ DF + +YTT Q N +G+ L DA P + K N
Sbjct: 294 KKMIKGTADFFAVQYYTTRLIKYQENKKGELGI-----LQDAEIEFFPDPSWK------N 342
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
W+Y+VP G+ L+ YIK Y NP + ITENG P + P L D +R +Y
Sbjct: 343 VDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQT 396
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQ 402
L AI+ D N++ Y WSLLDN+EW GY+SRFGL+ VD++D + R P S +
Sbjct: 397 FQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAK 454
>pdb|2ZOX|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase
pdb|3VKK|A Chain A, Crystal Structure Of The Covalent Intermediate Of Human
Cytosolic Beta-Glucosidase-Mannose Complex
Length = 469
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/418 (39%), Positives = 229/418 (54%), Gaps = 45/418 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT-GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K +G+ YRFS++WSR+ P+GT G INQ G+D+YNK+ID LL G+ P VTLYH+DLPQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRC 119
L+D+ GWL II F YA+ CF FGDRVK WIT N+ + ++ YD+G+ PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINQANVLSVMSYDLGMFPPG-- 182
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
+ H T Y AHN + HA+ Y ++ KQ G + ++ +W E A
Sbjct: 183 --IPHF-------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPAD 233
Query: 180 -NSTEDAEATQRAQDFQLGWFLDPLMF-GDYPSSMRNRVG----------SRLPRFTSSE 227
NS D EA +RA F L F P+ GDYP +++++ SRLP FT E
Sbjct: 234 PNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEE 293
Query: 228 AALLKGSLDFVGINHYTT--FYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
++KG+ DF + +YTT Q N +G+ L DA P + K N
Sbjct: 294 KKMIKGTADFFAVQYYTTRLIKYQENKKGELGI-----LQDAEIEFFPDPSWK------N 342
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
W+Y+VP G+ L+ YIK Y NP + ITENG P + P L D +R +Y
Sbjct: 343 VDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQT 396
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQ 402
L AI+ D N++ Y WSLLDN+EW GY+SRFGL+ VD++D + R P S +
Sbjct: 397 FQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAK 454
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 284 bits (727), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 168/418 (40%), Positives = 229/418 (54%), Gaps = 45/418 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT-GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K +G+ YRFS++WSR+ P+GT G INQ G+D+YNK+ID LL G+ P VTLYH+DLPQ
Sbjct: 66 IKQLGLTHYRFSLSWSRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFDLPQ 125
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRC 119
L+D+ GWL II F YA+ CF FGDRVK WIT NE + ++ YD+G+ PG
Sbjct: 126 TLEDQ-GGWLSEAIIESFDKYAQFCFSTFGDRVKQWITINEANVLSVMSYDLGMFPPG-- 182
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
+ H T Y AHN + HA+ Y ++ KQ G + ++ +W E A
Sbjct: 183 --IPHF-------GTGGYQAAHNLIKAHARSWHSYDSLFRKKQKGMVSLSLFAVWLEPAD 233
Query: 180 -NSTEDAEATQRAQDFQLGWFLDPLMF-GDYPSSMRNRVG----------SRLPRFTSSE 227
NS D EA +RA F L F P+ GDYP +++++ SRLP FT E
Sbjct: 234 PNSVSDQEAAKRAITFHLDLFAKPIFIDGDYPEVVKSQIASMSQKQGYPSSRLPEFTEEE 293
Query: 228 AALLKGSLDFVGINHYTT--FYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRAN 285
++KG+ DF + +YTT Q N +G+ L DA I F P N
Sbjct: 294 KKMIKGTADFFAVQYYTTRLIKYQENKKGELGI-----LQDA---EIEF---FPDPSWIN 342
Query: 286 SIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDY 345
W+Y+VP G+ L+ YIK Y NP + ITENG P + P L D +R +Y
Sbjct: 343 VDWIYVVPWGVCKLLKYIKDTYNNPVIYITENGF--PQSDPAP----LDDTQRWEYFRQT 396
Query: 346 LTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RYPKNSVQ 402
L AI+ D N++ Y WSLLDN+EW GY+SRFGL+ VD++D + R P S +
Sbjct: 397 FQELFKAIQLDKVNLQVYCAWSLLDNFEWNQGYSSRFGLFHVDFEDPARPRVPYTSAK 454
>pdb|1QOX|A Chain A, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|B Chain B, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|C Chain C, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|D Chain D, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|E Chain E, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|F Chain F, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|G Chain G, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|H Chain H, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|I Chain I, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|J Chain J, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|K Chain K, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|L Chain L, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|M Chain M, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|N Chain N, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|O Chain O, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
pdb|1QOX|P Chain P, Beta-Glucosidase From Bacillus Circulans Sp. Alkalophilus
Length = 449
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/412 (38%), Positives = 225/412 (54%), Gaps = 38/412 (9%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
+KD+G+ YRFSI+W R+ P GTG++N+AG+D+Y++L+D LLA GIEP+ TLYHWDLPQA
Sbjct: 67 LKDLGVKVYRFSISWPRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHWDLPQA 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D+ GW R I+ FA YAE F++ G ++K WITFNEP +G+ APG
Sbjct: 127 LQDQ-GGWGSRITIDAFAEYAELMFKELGGKIKQWITFNEPWCMAFLSNYLGVHAPGNKD 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ L + V+H+ L+ H + ++R + G +GIA + W
Sbjct: 186 LQLAI------------DVSHHLLVAHGRAVTLFR---ELGISGEIGIAPNTSWAVPYRR 230
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
+ ED EA R + W+LDP+ FG+YP M + +G + P + L+ +DF
Sbjct: 231 TKEDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYK-PPIVDGDMELIHQPIDF 289
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMR 297
+GIN+YT+ + N G++ +++++ G P D I I G+
Sbjct: 290 IGINYYTSSMNRYNPGEAGGMLSSEAIS----------MGAPKTD----IGWEIYAEGLY 335
Query: 298 SLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
L+ Y KY NPT+ ITENG N + D +RI Y +L AI EDG
Sbjct: 336 DLLRYTADKYGNPTLYITENGA--CYNDGLSLDGRIHDQRRIDYLAMHLIQASRAI-EDG 392
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLN 409
N+KGY WSL+DN+EWA GY RFGL VDY D R PK+S W+K ++
Sbjct: 393 INLKGYMEWSLMDNFEWAEGYGMRFGLVHVDY-DTLVRTPKDSFYWYKGVIS 443
>pdb|1OD0|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OD0|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIF|A Chain A, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIF|B Chain B, Family 1 B-glucosidase From Thermotoga Maritima
pdb|1OIM|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIM|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1OIN|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima
pdb|1W3J|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1W3J|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Tetrahydrooxazine
pdb|1UZ1|A Chain A, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|1UZ1|B Chain B, Family 1 B-Glucosidase From Thermotoga Maritima In Complex
With Isofagomine Lactam
pdb|2CBU|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBU|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Castanospermine
pdb|2CBV|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CBV|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Calystegine B2
pdb|2CES|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CES|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Glucoimidazole
pdb|2CET|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2CET|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenethyl-Substituted Glucoimidazole
pdb|2J77|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J77|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Deoxynojirimycin
pdb|2J78|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J78|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Hydroximolactam
pdb|2J79|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J79|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Galacto-Hydroximolactam
pdb|2J7B|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7B|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Gluco-Tetrazole
pdb|2J7C|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7C|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Phenylaminomethyl-Derived Glucoimidazole
pdb|2J7D|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7D|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methoxycarbonyl-substituted Glucoimidazole
pdb|2J7E|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7E|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Methyl Acetate-Substituted Glucoimidazole
pdb|2J7F|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7F|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Carboxylate-substituted Glucoimidazole
pdb|2J7G|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7G|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Methyl Acetic Acid-substituted Glucoimidazole
pdb|2J7H|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J7H|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Azafagomine
pdb|2J75|A Chain A, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2J75|B Chain B, Beta-glucosidase From Thermotoga Maritima In Complex With
Noeuromycin
pdb|2JAL|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2JAL|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
Cyclophellitol
pdb|2VRJ|A Chain A, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2VRJ|B Chain B, Beta-Glucosidase From Thermotoga Maritima In Complex With
N- Octyl-5-Deoxy-6-Oxa-N-(Thio)carbamoylcalystegine
pdb|2WBG|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WBG|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With
3-Imino-2-Oxa-(+)-Castanospermine
pdb|2WC3|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC3|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Oxa-(+)-8-Epi-
Castanospermine
pdb|2WC4|A Chain A, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|B Chain B, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|C Chain C, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
pdb|2WC4|D Chain D, Structure Of Family 1 Beta-Glucosidase From Thermotoga
Maritima In Complex With 3-Imino-2-Thia-(+)-
Castanospermine
Length = 468
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/413 (37%), Positives = 221/413 (53%), Gaps = 42/413 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
++ +G+ AYRFSI+W RI P GTG++NQ G+D YN++ID LL KGI P+VT+YHWDLP A
Sbjct: 90 IEKLGVKAYRFSISWPRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHWDLPFA 149
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L K GW +R+I + FA Y+ F+ FGDRVK+WIT NEP I G+ G+ APG
Sbjct: 150 LQLK-GGWANREIADWFAEYSRVLFENFGDRVKNWITLNEPWVVAIVGHLYGVHAPGMRD 208
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
I + + HN L HA+ ++R+ K G +GI F+ ++E AS
Sbjct: 209 IYV------------AFRAVHNLLRAHARAVKVFRETVK---DGKIGIVFNNGYFEPASE 253
Query: 181 STEDAEATQRAQDF-QLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVG 239
ED A + F FL+P+ GDYP + LP + + ++ +DFVG
Sbjct: 254 KEEDIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENYKDDMSEIQEKIDFVG 313
Query: 240 INHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSL 299
+N+Y+ + + DA A + P ++ IVP G+ +
Sbjct: 314 LNYYSGHLVKFD-------------PDAPAKVSFVERDLP----KTAMGWEIVPEGIYWI 356
Query: 300 MNYIKQKYRNPTVIITENG--MDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDG 357
+ +K++Y P V ITENG DD + D RI Y ++ AI+E G
Sbjct: 357 LKKVKEEYNPPEVYITENGAAFDD----VVSEDGRVHDQNRIDYLKAHIGQAWKAIQE-G 411
Query: 358 CNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
+KGYFVWSLLDN+EWA GY+ RFG+ +VDY QKR K+S W+ N + +
Sbjct: 412 VPLKGYFVWSLLDNFEWAEGYSKRFGIVYVDYS-TQKRIVKDSGYWYSNVVKN 463
>pdb|1WCG|A Chain A, Aphid Myrosinase
pdb|1WCG|B Chain B, Aphid Myrosinase
Length = 464
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/436 (37%), Positives = 225/436 (51%), Gaps = 64/436 (14%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGT-GQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+KD+ + YRFSI+W+RI P+G + G+ +YN LI+ L+ I P VT+YHWDLPQ
Sbjct: 68 IKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWDLPQ 127
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRC 119
L D GW++ + + F YA F FGDRVK WITFNEP +GY + AP
Sbjct: 128 YLQD-LGGWVNPIMSDYFKEYARVLFTYFGDRVKWWITFNEP-IAVCKGYSIKAYAPN-- 183
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFD-VIWYESA 178
L+L T Y+ H L+ H K +Y + +K Q G + I+ V +
Sbjct: 184 ---LNL------KTTGHYLAGHTQLIAHGKAYRLYEEMFKPTQNGKISISISGVFFMPKN 234
Query: 179 SNSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVG----------SRLPRFTSSEA 228
+ S +D E +RA F+ GWF P+ GDYP M+ V S+LP+FT E
Sbjct: 235 AESDDDIETAERANQFERGWFGHPVYKGDYPPIMKKWVDQKSKEEGLPWSKLPKFTKDEI 294
Query: 229 ALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSI- 287
LLKG+ DF +NHY++ L G + P N P A S+
Sbjct: 295 KLLKGTADFYALNHYSS-----------------RLVTFG--SDPNPNFNPDASYVTSVD 335
Query: 288 --WL------YI--VPRGMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDK 337
WL YI VP G+R L+ ++K +Y NP ++ITENG D L D +
Sbjct: 336 EAWLKPNETPYIIPVPEGLRKLLIWLKNEYGNPQLLITENGYGDDGQ--------LDDFE 387
Query: 338 RIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQK-RY 396
+I Y +YL L A+ ED CNV GY VWSLLDN+EW GY+ FGL +D+ D Q+ R
Sbjct: 388 KISYLKNYLNATLQAMYEDKCNVIGYTVWSLLDNFEWFYGYSIHFGLVKIDFNDPQRTRT 447
Query: 397 PKNSVQWFKNFLNSTK 412
+ S +FKN +++ K
Sbjct: 448 KRESYTYFKNVVSTGK 463
>pdb|1UYQ|A Chain A, Mutated B-Glucosidase A From Paenibacillus Polymyxa
Showing Increased Stability
Length = 447
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 151/414 (36%), Positives = 224/414 (54%), Gaps = 44/414 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ YRFS++W RIFPNG G++NQ G+D+Y++++D L GIEP+ TLYHWDLPQA
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW +R+ I F +AET F++F +++HW+TFNEP +G+ APG +
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTN 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ +A + V H+ L+ H +R + G +GIA +V W S
Sbjct: 186 L---------QTAID---VGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
S ED A R WFL P+ G YP + + G+ +P + ++ +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIADRANSIWLYIVPRGM 296
+GIN+Y+ + +N +AG L N G P+ D I + RG+
Sbjct: 290 IGINYYS-------------MSVNRFNPEAGFLQSEEINMGLPVTD----IGWPVESRGL 332
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
+++Y+ QKY N + ITENG N+ K ++DD+RI Y +L + AI D
Sbjct: 333 YEVLHYL-QKYGNIDIYITENGA-CINDEVVNGK--VQDDRRISYMQQHLVQVHRAI-HD 387
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
G +VKGY WSLLDN+EWA GY RFG+ VD++ Q R PK S W++N + +
Sbjct: 388 GLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFR-TQVRTPKQSYYWYRNVVGN 440
>pdb|3AHX|A Chain A, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|B Chain B, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|C Chain C, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
pdb|3AHX|D Chain D, Crystal Structure Of Beta-Glucosidase A From Bacterium
Clostridium Cellulovorans
Length = 453
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/418 (37%), Positives = 219/418 (52%), Gaps = 49/418 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
+K +G+ +YRFSIAW RIFP G G+INQ G+ Y LID L+ IEP +T+YHWDLPQ
Sbjct: 68 LKSLGIKSYRFSIAWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIYHWDLPQK 127
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW + Q+ + + YA F++FGDRVK WIT NEP + GY +G+ APG
Sbjct: 128 LQD-IGGWANPQVADYYVDYANLLFREFGDRVKTWITHNEPWVASYLGYALGVHAPGIKD 186
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ + L + AHN LL+H K YR + +Q G +GI ++ S S
Sbjct: 187 MKMAL------------LAAHNILLSHFKAVKAYR---ELEQDGQIGITLNLSTCYSNSA 231
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSM-----RNRVGSRLPRFTSSEAALLKGSL 235
ED A R+ + WFLD + G YP M + LP+ +E + +
Sbjct: 232 DEEDIAAAHRSDGWNNRWFLDAALKGTYPEDMIKIFSDTNIMPELPKELFTE---VFETS 288
Query: 236 DFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRG 295
DF+GIN+YT VV N+S A GA ++ N K + I P+G
Sbjct: 289 DFLGINYYTR-----------QVVKNNSEAFIGAESVAMDNPK------TEMGWEIYPQG 331
Query: 296 MRSLMNYIKQKYRNPTVIITENG--MDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAI 353
+ L+ I + Y N + ITENG +D NR ++D+ R+ Y + L+AI
Sbjct: 332 LYDLLTRIHRDYGNIDLYITENGAAFNDMVNR----DGKVEDENRLDYLYTHFAAALSAI 387
Query: 354 KEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNST 411
E G +KGY++WS +DN+EWA GY RFG+ V+YK Q+R K S W+K + +
Sbjct: 388 -EAGVPLKGYYIWSFMDNFEWAEGYEKRFGIVHVNYK-TQERTIKKSAYWYKELIERS 443
>pdb|1BGG|A Chain A, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|B Chain B, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|C Chain C, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
pdb|1BGG|D Chain D, Glucosidase A From Bacillus Polymyxa Complexed With
Gluconate
Length = 448
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 224/414 (54%), Gaps = 44/414 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ YRFS++W RIFPNG G++NQ G+D+Y++++D L GIEP+ TLYHWDLPQA
Sbjct: 68 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 127
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW +R+ I F +AET F++F +++HW+TFNEP +G+ APG +
Sbjct: 128 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTN 186
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ +A + V H+ L+ H +R + G +GIA +V W S
Sbjct: 187 L---------QTAID---VGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 231
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
S ED A R WFL P+ G YP + + G+ +P + ++ +D
Sbjct: 232 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 290
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIADRANSIWLYIVPRGM 296
+GIN+Y+ + +N +AG L N G P+ D I + RG+
Sbjct: 291 IGINYYS-------------MSVNRFNPEAGFLQSEEINMGLPVTD----IGWPVESRGL 333
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
+++Y+ QKY N + ITENG N+ K ++DD+RI Y +L + I D
Sbjct: 334 YEVLHYL-QKYGNIDIYITENGA-CINDEVVNGK--VQDDRRISYMQQHLVQVHRTI-HD 388
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
G +VKGY WSLLDN+EWA GY RFG+ VD++ Q R PK S W++N +++
Sbjct: 389 GLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFR-TQVRTPKESYYWYRNVVSN 441
>pdb|1BGA|A Chain A, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|B Chain B, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|C Chain C, Beta-Glucosidase A From Bacillus Polymyxa
pdb|1BGA|D Chain D, Beta-Glucosidase A From Bacillus Polymyxa
Length = 447
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 224/414 (54%), Gaps = 44/414 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ YRFS++W RIFPNG G++NQ G+D+Y++++D L GIEP+ TLYHWDLPQA
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQEGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW +R+ I F +AET F++F +++HW+TFNEP +G+ APG +
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTN 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ +A + V H+ L+ H +R + G +GIA +V W S
Sbjct: 186 L---------QTAID---VGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
S ED A R WFL P+ G YP + + G+ +P + ++ +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIADRANSIWLYIVPRGM 296
+GIN+Y+ + +N +AG L N G P+ D I + RG+
Sbjct: 290 IGINYYS-------------MSVNRFNPEAGFLQSEEINMGLPVTD----IGWPVESRGL 332
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
+++Y+ QKY N + ITENG N+ K ++DD+RI Y +L + I D
Sbjct: 333 YEVLHYL-QKYGNIDIYITENGA-CINDEVVNGK--VQDDRRISYMQQHLVQVHRTI-HD 387
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
G +VKGY WSLLDN+EWA GY RFG+ VD++ Q R PK S W++N +++
Sbjct: 388 GLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFR-TQVRTPKESYYWYRNVVSN 440
>pdb|1E4I|A Chain A, 2-Deoxy-2-Fluoro-Beta-D-GlucosylENZYME INTERMEDIATE
Complex Of The Beta-Glucosidase From Bacillus Polymyxa
Length = 447
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 224/414 (54%), Gaps = 44/414 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ YRFS++W RIFPNG G++NQ G+D+Y++++D L GIEP+ TLYHWDLPQA
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW +R+ I F +AET F++F +++HW+TFNEP +G+ APG +
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTN 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ +A + V H+ L+ H +R + G +GIA +V W S
Sbjct: 186 L---------QTAID---VGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
S ED A R WFL P+ G YP + + G+ +P + ++ +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIADRANSIWLYIVPRGM 296
+GIN+Y+ + +N +AG L N G P+ D I + RG+
Sbjct: 290 IGINYYS-------------MSVNRFNPEAGFLQSEEINMGLPVTD----IGWPVESRGL 332
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
+++Y+ QKY N + ITENG N+ K ++DD+RI Y +L + I D
Sbjct: 333 YEVLHYL-QKYGNIDIYITENGA-CINDEVVNGK--VQDDRRISYMQQHLVQVHRTI-HD 387
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
G +VKGY WSLLDN+EWA GY RFG+ VD++ Q R PK S W++N +++
Sbjct: 388 GLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFR-TQVRTPKQSYYWYRNVVSN 440
>pdb|1TR1|A Chain A, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|B Chain B, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|C Chain C, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
pdb|1TR1|D Chain D, Crystal Structure Of E96k Mutated Beta-glucosidase A From
Bacillus Polymyxa, An Enzyme With Increased
Thermoresistance
Length = 447
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/414 (36%), Positives = 224/414 (54%), Gaps = 44/414 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ YRFS++W RIFPNG G++NQ G+D+Y++++D L GIEP+ TLYHWDLPQA
Sbjct: 67 MKELGIRTYRFSVSWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWDLPQA 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L D GW +R+ I F +AET F++F +++HW+TFNEP +G+ APG +
Sbjct: 127 LQDA-GGWGNRRTIQAFVQFAETMFREFHGKIQHWLTFNEPWCIAFLSNMLGVHAPGLTN 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ +A + V H+ L+ H +R + G +GIA +V W S
Sbjct: 186 L---------QTAID---VGHHLLVAHGLSVRRFR---ELGTSGQIGIAPNVSWAVPYST 230
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLDF 237
S ED A R WFL P+ G YP + + G+ +P + ++ +D
Sbjct: 231 SEEDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVP-IQDGDMDIIGEPIDM 289
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIADRANSIWLYIVPRGM 296
+GIN+Y+ + +N +AG L N G P+ D I + RG+
Sbjct: 290 IGINYYS-------------MSVNRFNPEAGFLQSEEINMGLPVTD----IGWPVESRGL 332
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
+++Y+ QKY N + ITENG N+ K ++DD+RI Y +L + I D
Sbjct: 333 YEVLHYL-QKYGNIDIYITENGA-CINDEVVNGK--VQDDRRISYMQQHLVQVHRTI-HD 387
Query: 357 GCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
G +VKGY WSLLDN+EWA GY RFG+ VD++ Q R PK S W++N +++
Sbjct: 388 GLHVKGYMAWSLLDNFEWAEGYNMRFGMIHVDFR-TQVRTPKESYYWYRNVVSN 440
>pdb|3TA9|A Chain A, Beta-Glucosidase A From The Halothermophile H. Orenii
pdb|3TA9|B Chain B, Beta-Glucosidase A From The Halothermophile H. Orenii
Length = 458
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 220/417 (52%), Gaps = 42/417 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK++G+ +YRFS +W RI P G G++NQ G+D Y +L+D LL I P +TLYHWDLPQA
Sbjct: 75 MKEIGIRSYRFSTSWPRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHWDLPQA 134
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L DK GW +R FA YA F++F V W+T NEP +G+ G APG
Sbjct: 135 LQDK-GGWTNRDTAKYFAEYARLMFEEFNGLVDLWVTHNEPWVVAFEGHAFGNHAPGTKD 193
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
L VAH+ LL+H DI+R++ G +GI ++ A +
Sbjct: 194 FKTAL------------QVAHHLLLSHGMAVDIFREE---DLPGEIGITLNLTPAYPAGD 238
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSS--EAALLKGSLDFV 238
S +D +A D+ WFL P+ G YP + + L FT+ + ++ +DF+
Sbjct: 239 SEKDVKAASLLDDYINAWFLSPVFKGSYPEELHHIYEQNLGAFTTQPGDMDIISRDIDFL 298
Query: 239 GINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRS 298
GIN+Y+ + D+L +A + + +P + I+ P+G+
Sbjct: 299 GINYYSRMVVRHKP--------GDNLFNAEVVKM---EDRPSTEMGWEIY----PQGLYD 343
Query: 299 LMNYIKQKYRNPTVIITENG--MDDPNNRFTPTKEA-LKDDKRIKYHNDYLTNLLAAIKE 355
++ + ++Y + + ITENG DD T+E + D+KRI Y D+ A+K
Sbjct: 344 ILVRVNKEYTDKPLYITENGAAFDD-----KLTEEGKIHDEKRINYLGDHFKQAYKALK- 397
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNSTK 412
DG ++GY+VWSL+DN+EWA GY+ RFGL +VDY++ +R+ K+S W++ + +
Sbjct: 398 DGVPLRGYYVWSLMDNFEWAYGYSKRFGLIYVDYENGNRRFLKDSALWYREVIEKGQ 454
>pdb|3CMJ|A Chain A, Crystal Structure Of Engineered Beta-Glucosidase From Soil
Metagenome
Length = 465
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 208/413 (50%), Gaps = 47/413 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M+ +G+ YRFSIAW+RI P+ + QINQ G+D Y +L++ L + I P TLYHWDLPQ
Sbjct: 88 MRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQW 147
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
++D+ GWL R+ + FA Y GD++ W+T NEP GY +GL APG
Sbjct: 148 VEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKD 206
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
L G VAH+ LL+H + +R A + + F+ I+ SA
Sbjct: 207 PTL-----GGR-------VAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEP 254
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSE-AALLKGSLDFVG 239
+ D EA +R FQ FL+PL+ G Y + LP F + E + +DF+G
Sbjct: 255 A--DVEAARRMHSFQNELFLEPLIRGQYNQATLMAY-PNLPEFIAPEDMQTISAPIDFLG 311
Query: 240 INHYTTFYAQRNATNL-IGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRS 298
+N+Y + + I VV +S P+ ++ I P G+
Sbjct: 312 VNYYNPMRVKSSPQPPGIEVVQVES---------------PV----TAMGWEIAPEGLYD 352
Query: 299 LMNYIKQKYRNPTVIITENGM---DDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
L+ I + Y + ITENG D P+ + D +R+ Y ++ A+
Sbjct: 353 LLMGITRTYGKLPIYITENGAAFDDQPDQ-----SGQVNDPQRVGYFQGHIGAARRALA- 406
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
DG +++GY+ WSLLDN+EWA GY+ RFG+ +VD+ + Q+R K S QW+++ +
Sbjct: 407 DGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDF-ETQQRTLKQSAQWYRDVI 458
>pdb|2O9P|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa
pdb|2O9T|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
Glucose
pdb|2Z1S|A Chain A, Beta-Glucosidase B From Paenibacillus Polymyxa Complexed
With Cellotetraose
Length = 454
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 203/413 (49%), Gaps = 44/413 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK +G YRFS+AW RI P G IN+ G+ Y L+D + G+ P +TLYHWDLPQ
Sbjct: 76 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 134
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
++D+ GW R+ I F TYA +FG+R+ W T NEP+ +I GY G APG
Sbjct: 135 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 191
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ E + AH+ L+ H ++++++K G +GI ++ ++AS
Sbjct: 192 ----------ENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLNMEHVDAASE 238
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRF---TSSEAALLKGSLDF 237
ED A R F WF +PL G YP M G+ L + L++ DF
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 298
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIP-FKNGKPIADRANSIWLYIVPRGM 296
+GIN+YT + S DA L + +P+ D I P
Sbjct: 299 LGINYYTR-------------SIIRSTNDASLLQVEQVHMEEPVTDMGWEI----HPESF 341
Query: 297 RSLMNYIKQKY-RNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
L+ I++ + + ++ITENG R ++D R +Y ++L I+E
Sbjct: 342 YKLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEE 398
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
G +KGYFVWS LDN+EWA GY+ RFG+ ++Y + Q+R PK S WFK +
Sbjct: 399 GG-QLKGYFVWSFLDNFEWAWGYSKRFGIVHINY-ETQERTPKQSALWFKQMM 449
>pdb|2O9R|A Chain A, Beta-Glucosidase B Complexed With Thiocellobiose
Length = 452
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 203/413 (49%), Gaps = 44/413 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK +G YRFS+AW RI P G IN+ G+ Y L+D + G+ P +TLYHWDLPQ
Sbjct: 74 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 132
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
++D+ GW R+ I F TYA +FG+R+ W T NEP+ +I GY G APG
Sbjct: 133 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 189
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ E + AH+ L+ H ++++++K G +GI ++ ++AS
Sbjct: 190 ----------ENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLNMEHVDAASE 236
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRF---TSSEAALLKGSLDF 237
ED A R F WF +PL G YP M G+ L + L++ DF
Sbjct: 237 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 296
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIP-FKNGKPIADRANSIWLYIVPRGM 296
+GIN+YT + S DA L + +P+ D I P
Sbjct: 297 LGINYYTR-------------SIIRSTNDASLLQVEQVHMEEPVTDMGWEI----HPESF 339
Query: 297 RSLMNYIKQKY-RNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
L+ I++ + + ++ITENG R ++D R +Y ++L I+E
Sbjct: 340 YKLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRQRYIEEHLKACHRFIEE 396
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
G +KGYFVWS LDN+EWA GY+ RFG+ ++Y + Q+R PK S WFK +
Sbjct: 397 GG-QLKGYFVWSFLDNFEWAWGYSKRFGIVHINY-ETQERTPKQSALWFKQMM 447
>pdb|4HZ6|A Chain A, Crystal Structure Of Bglb
pdb|4HZ7|A Chain A, Crystal Structure Of Bglb With Glucose
pdb|4HZ8|A Chain A, Crystal Structure Of Bglb With Natural Substrate
Length = 444
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 208/413 (50%), Gaps = 47/413 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M+ +G+ YRFSIAW+RI P+ + QINQ G+D Y +L++ L + I P TLYHWDLPQ
Sbjct: 67 MRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHWDLPQW 126
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
++D+ GWL R+ + FA Y GD++ W+T NEP GY +GL APG
Sbjct: 127 VEDE-GGWLSRESASRFAEYTHALVAALGDQIPLWVTHNEPMVTVWAGYHMGLFAPGLKD 185
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
L G VAH+ LL+H + +R A + + F+ I+ SA
Sbjct: 186 PTL-----GGR-------VAHHLLLSHGQALQAFRALSPAGSQMGITLNFNTIYPVSAEP 233
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSE-AALLKGSLDFVG 239
+ D EA +R FQ FL+PL+ G Y + LP F + E + +DF+G
Sbjct: 234 A--DVEAARRMHSFQNELFLEPLIRGQYNQATLMAY-PNLPEFIAPEDMQTISAPIDFLG 290
Query: 240 INHYTTFYAQRNATNL-IGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRS 298
+N+Y + + I VV +S P+ ++ I P G+
Sbjct: 291 VNYYNPMRVKSSPQPPGIEVVQVES---------------PV----TAMGWEIAPEGLYD 331
Query: 299 LMNYIKQKYRNPTVIITENGM---DDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
L+ I + Y + ITENG D P+ + D +R+ Y ++ A+
Sbjct: 332 LLMGITRTYGKLPIYITENGAAFDDQPDQ-----SGQVNDPQRVGYFQGHIGAARRALA- 385
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
DG +++GY+ WSLLDN+EWA GY+ RFG+ +VD+ + Q+R K S QW+++ +
Sbjct: 386 DGVDLRGYYAWSLLDNFEWAEGYSKRFGIIYVDF-ETQQRTLKQSAQWYRDVI 437
>pdb|2JIE|A Chain A, Beta-Glucosidase B From Bacillus Polymyxa Complexed With
2- F-Glucose
Length = 454
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 202/413 (48%), Gaps = 44/413 (10%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
MK +G YRFS+AW RI P G IN+ G+ Y L+D + G+ P +TLYHWDLPQ
Sbjct: 76 MKQLGFLHYRFSVAWPRIMP-AAGIINEEGLLFYEHLLDEIELAGLIPMLTLYHWDLPQW 134
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
++D+ GW R+ I F TYA +FG+R+ W T NEP+ +I GY G APG
Sbjct: 135 IEDE-GGWTQRETIQHFKTYASVIMDRFGERINWWNTINEPYCASILGYGTGEHAPGH-- 191
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ E + AH+ L+ H ++++++K G +GI ++ ++AS
Sbjct: 192 ----------ENWREAFTAAHHILMCHGIASNLHKEKGLT---GKIGITLNMEHVDAASE 238
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRF---TSSEAALLKGSLDF 237
ED A R F WF +PL G YP M G+ L + L++ DF
Sbjct: 239 RPEDVAAAIRRDGFINRWFAEPLFNGKYPEDMVEWYGTYLNGLDFVQPGDMELIQQPGDF 298
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIP-FKNGKPIADRANSIWLYIVPRGM 296
+GIN+YT + S DA L + +P+ D I P
Sbjct: 299 LGINYYTR-------------SIIRSTNDASLLQVEQVHMEEPVTDMGWEI----HPESF 341
Query: 297 RSLMNYIKQKY-RNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKE 355
L+ I++ + + ++ITENG R ++D R Y ++L I+E
Sbjct: 342 YKLLTRIEKDFSKGLPILITENG---AAMRDELVNGQIEDTGRHGYIEEHLKACHRFIEE 398
Query: 356 DGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFL 408
G +KGYFVWS LDN+EWA GY+ RFG+ ++Y + Q+R PK S WFK +
Sbjct: 399 GG-QLKGYFVWSFLDNFEWAWGYSKRFGIVHINY-ETQERTPKQSALWFKQMM 449
>pdb|1GNX|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GNX|B Chain B, B-Glucosidase From Streptomyces Sp
pdb|1GON|A Chain A, B-Glucosidase From Streptomyces Sp
pdb|1GON|B Chain B, B-Glucosidase From Streptomyces Sp
Length = 479
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 203/416 (48%), Gaps = 28/416 (6%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M ++G+ AYRFS+AW RI P G G Q G+D Y +L D LLAKGI+P TLYHWDLPQ
Sbjct: 80 MAELGLGAYRFSLAWPRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHWDLPQE 139
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L++ GW +R FA YA GDRVK W T NEP GY G+ APGR
Sbjct: 140 LENA-GGWPERATAERFAEYAAIAADALGDRVKTWTTLNEPWCSAFLGYGSGVHAPGRTD 198
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ L AH+ L H R + A S + ++ ++
Sbjct: 199 PVAALRA------------AHHLNLGHGLAVQALRDRLPADAQCS--VTLNIHHVRPLTD 244
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSM-RNRVGSRLPRFT-SSEAALLKGSLDFV 238
S DA+A +R F P++ G YP + ++ G F + L LDF+
Sbjct: 245 SDADADAVRRIDALANRVFTGPMLQGAYPEDLVKDTAGLTDWSFVRDGDLRLAHQKLDFL 304
Query: 239 GINHYT-TFYAQRNAT---NLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPR 294
G+N+Y+ T ++ + + N G + GA + F +P + W + P
Sbjct: 305 GVNYYSPTLVSEADGSGTHNSDGHGRSAHSPWPGADRVAFH--QPPGETTAMGWA-VDPS 361
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIK 354
G+ L+ + + ++ITENG + + + + D +RI Y D+L + AIK
Sbjct: 362 GLYELLRRLSSDFPALPLVITENGA--AFHDYADPEGNVNDPERIAYVRDHLAAVHRAIK 419
Query: 355 EDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKNFLNS 410
DG +V+GYF+WSLLDN+EWA GY+ RFG +VDY R PK S +W+ +
Sbjct: 420 -DGSDVRGYFLWSLLDNFEWAHGYSKRFGAVYVDYP-TGTRIPKASARWYAEVART 473
>pdb|1UG6|A Chain A, Structure Of Beta-Glucosidase At Atomic Resolution From
Thermus Thermophilus Hb8
Length = 431
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/406 (34%), Positives = 206/406 (50%), Gaps = 47/406 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M+ +G+ AYRFS+AW RI P G G+IN G+ Y++L+D LLA GI P++TLYHWDLP A
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+++ GW R+ FA YAE + DRV + T NEP G+ G APG +
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
L RA AH+ LL H + R A +GI + A
Sbjct: 185 --LEAALRA----------AHHLLLGHGLAVEALR----AAGARRVGIVLNF-----APA 223
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
ED EA A + +FLDP++ YP S R +P S + L+ LDF+G+
Sbjct: 224 YGEDPEAVDVADRYHNRFFLDPILGKGYPESP-FRDPPPVP-ILSRDLELVARPLDFLGV 281
Query: 241 NHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLM 300
N+Y G T+P + P A ++ + P G+ L+
Sbjct: 282 NYYAPVRVA-----------------PGTGTLPVRYLPPEGP-ATAMGWEVYPEGLYHLL 323
Query: 301 NYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNV 360
+ ++ P + +TENG P+ + ++D +R+ Y ++ L A +E+G ++
Sbjct: 324 KRLGREVPWP-LYVTENGAAYPD--LWTGEAVVEDPERVAYLEAHVEAALRA-REEGVDL 379
Query: 361 KGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKN 406
+GYFVWSL+DN+EWA GYT RFGLY+VD+ +Q+R PK S W++
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRFGLYYVDFP-SQRRIPKRSALWYRE 424
>pdb|3ZJK|A Chain A, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|B Chain B, Crystal Structure Of Ttb-gly F401s Mutant
pdb|3ZJK|C Chain C, Crystal Structure Of Ttb-gly F401s Mutant
Length = 431
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 204/406 (50%), Gaps = 47/406 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M+ +G+ AYRFS+AW RI P G G+IN G+ Y++L+D LLA GI P++TLYHWDLP A
Sbjct: 66 MQSLGVRAYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWDLPLA 125
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+++ GW R+ FA YAE + DRV + T NEP G+ G APG +
Sbjct: 126 LEER-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ L AH+ LL H + R A +GI + A
Sbjct: 185 LEAALRA------------AHHLLLGHGLAVEALR----AAGARRVGIVLNF-----APA 223
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
ED EA A + +FLDP++ YP S R +P S + L+ LDF+G+
Sbjct: 224 YGEDPEAVDVADRYHNRFFLDPILGKGYPESP-FRDPPPVP-ILSRDLELVARPLDFLGV 281
Query: 241 NHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLM 300
N+Y G T+P + P A ++ + P G+ L+
Sbjct: 282 NYYAPVRVA-----------------PGTGTLPVRYLPPEGP-ATAMGWEVYPEGLHHLL 323
Query: 301 NYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNV 360
+ ++ P + +TENG P+ + ++D +R+ Y ++ L A +E+G ++
Sbjct: 324 KRLGREVPWP-LYVTENGAAYPD--LWTGEAVVEDPERVAYLEAHVEAALRA-REEGVDL 379
Query: 361 KGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKN 406
+GYFVWSL+DN+EWA GYT R GLY+VD+ +Q+R PK S W++
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRSGLYYVDFP-SQRRIPKRSALWYRE 424
>pdb|1NP2|A Chain A, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
pdb|1NP2|B Chain B, Crystal Structure Of Thermostable Beta-Glycosidase From
Thermophilic Eubacterium Thermus Nonproteolyticus Hg102
Length = 436
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 200/406 (49%), Gaps = 47/406 (11%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M+ +G+ YRFS+AW RI P G G+IN G+ Y++L+D LLA GI P++TLYHWDLPQA
Sbjct: 66 MQSLGVGVYRFSVAWPRILPEGRGRINPKGLAFYDRLVDRLLAAGITPFLTLYHWDLPQA 125
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
L+D+ GW R+ FA YAE + DRV + T NEP G+ G APG +
Sbjct: 126 LEDR-GGWRSRETAFAFAEYAEAVARALADRVPFFATLNEPWCSAFLGHWTGEHAPGLRN 184
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ L AH+ LL H + R A +GI + A
Sbjct: 185 LEAALRA------------AHHLLLGHGLAVEALR----AAGARRVGIVLNF-----APA 223
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
ED EA A + +FLDP++ YP S P + A+ + LDF+G+
Sbjct: 224 YGEDPEAVDVADRYHNRYFLDPILGRGYPESPFQDPPP-APILSRDLEAIAR-PLDFLGV 281
Query: 241 NHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLM 300
N+Y G +P + P W + P G+ L+
Sbjct: 282 NYYAPVRVA-----------------PGTGPLPVRYLPPEGPVTAMGW-EVYPEGLYHLL 323
Query: 301 NYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNV 360
+ ++ P + ITENG P+ + ++D +R+ Y ++ L A +E+G ++
Sbjct: 324 KRLGREVPWP-LYITENGAAYPD--LWTGEAVVEDPERVAYLEAHVEAALRA-REEGVDL 379
Query: 361 KGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFKN 406
+GYFVWSL+DN+EWA GYT RFGLY+VD+ +Q+R PK S W++
Sbjct: 380 RGYFVWSLMDNFEWAFGYTRRFGLYYVDFP-SQRRIPKRSALWYRE 424
>pdb|1PBG|A Chain A, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|1PBG|B Chain B, The Three-Dimensional Structure Of 6-Phospho-Beta
Galactosidase From Lactococcus Lactis
pdb|3PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-C
pdb|3PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-C
Length = 468
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 209/428 (48%), Gaps = 46/428 (10%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
++ G++ R SIAWSRIFP G G++N+ GV+ Y+KL + +EP+VTL+H+D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+L+R+ I F YA CF++F + V +W TFNE Y VG PG
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKK-YKAKQGGSLGIAFDV-IWYESAS 179
L +F HN +++HA+ +Y+ K YK G +G+ + Y
Sbjct: 182 LAKVFQS-----------HHNMMVSHARAVKLYKDKGYK----GEIGVVHALPTKYPYDP 226
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPR-----------FTSSEA 228
+ D A + + LD G Y V L F + +A
Sbjct: 227 ENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDA 286
Query: 229 ALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIA----DR 283
A K DF+GIN+Y + + Q A + ++++ + G+ K G+ +A R
Sbjct: 287 A--KDLNDFLGINYYMSDWMQ--AFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPR 342
Query: 284 ANSIWLYIVPRGMRSLMNYIKQKYRN-PTVIITENGMDDPNNRFTPTKEALKDDKRIKYH 342
+ W+ I P G+ + +K Y N + ITENG+ + T + DD RI Y
Sbjct: 343 TDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT---VYDDGRIDYV 398
Query: 343 NDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQ 402
+L L AI DG NVKGYF+WSL+D + W+ GY R+GL++VD+ D Q+RYPK S
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 403 WFKNFLNS 410
W+K +
Sbjct: 457 WYKKLAET 464
>pdb|2PBG|A Chain A, 6-Phospho-Beta-D-Galactosidase Form-B
Length = 468
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 138/428 (32%), Positives = 209/428 (48%), Gaps = 46/428 (10%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
++ G++ R SIAWSRIFP G G++N+ GV+ Y+KL + +EP+VTL+H+D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+L+R+ I F YA CF++F + V +W TFNE Y VG PG
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKK-YKAKQGGSLGIAFDV-IWYESAS 179
L +F HN +++HA+ +Y+ K YK G +G+ + Y
Sbjct: 182 LAKVFQS-----------HHNMMVSHARAVKLYKDKGYK----GEIGVVHALPTKYPYDP 226
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPR-----------FTSSEA 228
+ D A + + LD G Y V L F + +A
Sbjct: 227 ENPADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDA 286
Query: 229 ALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIA----DR 283
A K DF+GIN+Y + + Q A + ++++ + G+ K G+ +A R
Sbjct: 287 A--KDLNDFLGINYYMSDWMQ--AFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPR 342
Query: 284 ANSIWLYIVPRGMRSLMNYIKQKYRN-PTVIITENGMDDPNNRFTPTKEALKDDKRIKYH 342
+ W+ I P G+ + +K Y N + ITENG+ + T + DD RI Y
Sbjct: 343 TDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT---VYDDGRIDYV 398
Query: 343 NDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQ 402
+L L AI DG NVKGYF+WSL+D + W+ GY R+GL++VD+ D Q+RYPK S
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 403 WFKNFLNS 410
W+K +
Sbjct: 457 WYKKLAET 464
>pdb|4PBG|A Chain A, 6-Phospho-Beta-Galactosidase Form-Cst
pdb|4PBG|B Chain B, 6-Phospho-Beta-Galactosidase Form-Cst
Length = 468
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 208/428 (48%), Gaps = 46/428 (10%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
++ G++ R SIAWSRIFP G G++N+ GV+ Y+KL + +EP+VTL+H+D P+AL
Sbjct: 64 EEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEAL 123
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+L+R+ I F YA CF++F + V +W TFNE Y VG PG
Sbjct: 124 HSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPIGDGQYLVGKFPPGIKYD 181
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKK-YKAKQGGSLGIAFDV-IWYESAS 179
L +F HN +++HA+ +Y+ K YK G +G+ + Y
Sbjct: 182 LAKVFQS-----------HHNMMVSHARAVKLYKDKGYK----GEIGVVHALPTKYPYDP 226
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPR-----------FTSSEA 228
+ D A + + LD G Y V L F + +A
Sbjct: 227 ENPADVRAAELEDIIHNKFILDATYLGHYSDKTMEGVNHILAENGGELDLRDEDFQALDA 286
Query: 229 ALLKGSLDFVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKN-GKPIA----DR 283
A K DF+GIN+Y + + Q A + ++++ + G+ K G+ +A R
Sbjct: 287 A--KDLNDFLGINYYMSDWMQ--AFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPR 342
Query: 284 ANSIWLYIVPRGMRSLMNYIKQKYRN-PTVIITENGMDDPNNRFTPTKEALKDDKRIKYH 342
+ W+ I P G+ + +K Y N + IT NG+ + T + DD RI Y
Sbjct: 343 TDWDWI-IYPEGLYDQIMRVKNDYPNYKKIYITCNGLGYKDEFVDNT---VYDDGRIDYV 398
Query: 343 NDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQ 402
+L L AI DG NVKGYF+WSL+D + W+ GY R+GL++VD+ D Q+RYPK S
Sbjct: 399 KQHLEVLSDAIA-DGANVKGYFIWSLMDVFSWSNGYEKRYGLFYVDF-DTQERYPKKSAH 456
Query: 403 WFKNFLNS 410
W+K +
Sbjct: 457 WYKKLAET 464
>pdb|4B3K|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3K|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|A Chain A, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|B Chain B, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|C Chain C, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|D Chain D, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|E Chain E, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
pdb|4B3L|F Chain F, Family 1 6-phospho-beta-d Glycosidase From Streptococcus
Pyogenes
Length = 479
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/411 (28%), Positives = 193/411 (46%), Gaps = 27/411 (6%)
Query: 1 MKDMGMDAYRFSIAWSRIFPN-GTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+ +G ++YR SI W+R+ + IN G+ +YN++IDA LA GI P + L+H+DLP
Sbjct: 64 LASLGHNSYRTSIQWTRLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHFDLPI 123
Query: 60 ALDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRC 119
AL Y GW + +++ F +++ CF++FGDRVK W NEP Y + P
Sbjct: 124 ALYQAYGGWESKHVVDLFVAFSKVCFEQFGDRVKDWFVHNEPMVVVEGSYLMQFHYPAIV 183
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
G A + VA+N L AKV YR+ G +G ++ AS
Sbjct: 184 D---------GKKAVQ---VAYNLALATAKVIQAYRRGPAELSDGRIGTILNLTPAYPAS 231
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN--RVGSRLPRFTSSEAALL-KGSLD 236
S D A A+ + F++ + G +P + + L + T E AL+ + +D
Sbjct: 232 QSEADMAAAHFAELWNNDLFMEAAVHGKFPEELVAVLKKDGVLWQSTPEELALIAENRVD 291
Query: 237 FVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPI-ADRANSIWLYIVPRG 295
++G+N Y + +R V++ S + G+ + D+ I+ P
Sbjct: 292 YLGLNFY---HPKRVKAPDAIPVISPSWSPEWYYDPYLMPGRRMNVDKGWEIY----PEA 344
Query: 296 MRSLMNYIKQKYRNPTVIITENGMD-DPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIK 354
+ + ++ Y N ++ENG+ +R+ ++DD RI++ ++LT L I
Sbjct: 345 VYDIAIKMRDHYDNIPWFLSENGVGISGEDRYRDETGQIQDDYRIQFLKEHLTYLHKGI- 403
Query: 355 EDGCNVKGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNSVQWFK 405
E G N GY VW+ +D W W Y +R+GL + Q R PK S WFK
Sbjct: 404 EAGSNCFGYHVWTPIDGWSWLNAYKNRYGL-VENNIHTQVRRPKASAYWFK 453
>pdb|3QOM|A Chain A, Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Lactobacillus Plantarum
pdb|4GZE|A Chain A, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|B Chain B, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|C Chain C, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|D Chain D, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|E Chain E, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
pdb|4GZE|F Chain F, Crystal Structure Of 6-phospho-beta-glucosidase From
Lactobacillus Plantarum (apo Form)
Length = 481
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 43/419 (10%)
Query: 3 DMGMDAYRFSIAWSRIFPNG-TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
+ G +R SIAW+RIFPNG + N+AG+ Y+ L D L GI+P VTL H++ P L
Sbjct: 85 EXGFKCFRTSIAWTRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHFEXPYHL 144
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+Y GW +R++I + +A+ CF+++ D+V +W TFNE + T ++ G
Sbjct: 145 VKQYGGWRNRKLIQFYLNFAKVCFERYRDKVTYWXTFNEINNQT------NFESDGAXLT 198
Query: 122 LLHLFCRAG-NSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
+ + G N Y AH L+ A + + Q G IA I+ +A+
Sbjct: 199 DSGIIHQPGENRERWXYQAAHYELVASAAAVQLGHQINPDFQIGCX-IAXCPIYPLTAAP 257
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRF--TSSEAALLK-GSLDF 237
+ D QRA + +F D G YP +RNR S T+ + +L+ G++D+
Sbjct: 258 A--DVLFAQRAXQTRF-YFADVHCNGTYPQWLRNRFESEHFNLDITAEDLKILQAGTVDY 314
Query: 238 VGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNG---KPIADRANSIWLYIVPR 294
+G ++Y +F ++ D G L ++ P ++ W + P
Sbjct: 315 IGFSYYXSF----------------TVKDTGKLAYNEEHDLVKNPYVKASDWGWQ-VDPV 357
Query: 295 GMRSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIK 354
G+R N+ +Y P + I ENG+ + + + + DD RI Y D+L + A+
Sbjct: 358 GLRYAXNWFTDRYHLP-LFIVENGLGAIDKKTADNQ--IHDDYRIDYLTDHLRQIKLAVL 414
Query: 355 EDGCNVKGYFVWSLLDNWEWAAGYTS-RFGLYFVDYKDNQ----KRYPKNSVQWFKNFL 408
EDG ++ GY W +D + G S R+G +VD D+ KRY K+S WF++ +
Sbjct: 415 EDGVDLIGYTPWGCIDLVAASTGQXSKRYGFIYVDENDDGSGSLKRYKKDSFTWFQHVI 473
>pdb|4F66|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate.
pdb|4F66|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159 In Complex With
Beta-D-Glucose-6-Phosphate
Length = 480
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/420 (28%), Positives = 196/420 (46%), Gaps = 37/420 (8%)
Query: 3 DMGMDAYRFSIAWSRIFPNG-TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
+MG +R SIAW+RIFP G + N+AG+ Y+ L D L GIEP VTL H++LP L
Sbjct: 81 EMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHL 140
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+Y G+ +R++I+ F +AE CF+++ D+VK+W+TFNE + D AP S
Sbjct: 141 VTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDF---APFTNSG 197
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNS 181
+ ++ + Y AH L+ A+ I + ++G + A+ +
Sbjct: 198 I--VYKEGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIGCMVAMCPIYPATCN 252
Query: 182 TEDAEATQRAQDFQLGWFLDPLMFGDYPSSMR---NRVGSRLPRFTSSEAALLKGSLDFV 238
+D Q+A + +F D + G YP + R ++ + L +G++D++
Sbjct: 253 PKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTVDYI 311
Query: 239 GINHYTTFY--AQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGM 296
G ++Y +F A R + + L KN P ++ W I P+G+
Sbjct: 312 GFSYYMSFVIDAHRENNPYYDYLETEDLV---------KN--PYVKASDWDWQ-IDPQGL 359
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
R +N+ Y P + I ENG + + DD RI Y ++ ++ A+ ED
Sbjct: 360 RYALNWFTDMYHLP-LFIVENGFGAIDQ--VEADGMVHDDYRIDYLGAHIKEMIKAVDED 416
Query: 357 GCNVKGYFVWSLLDNWEWAAG-YTSRFGLYFVDYKDNQ-----KRYPKNSVQWFKNFLNS 410
G + GY W +D G R+G +VD KD++ KR PK S W+K + S
Sbjct: 417 GVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVD-KDDEGKGTLKRSPKLSFNWYKEVIAS 475
>pdb|4F79|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase Mutant
(E375q) In Complex With Salicin 6-Phosphate
pdb|4GPN|A Chain A, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate.
pdb|4GPN|B Chain B, The Crystal Structure Of 6-P-Beta-D-Glucosidase (E375q
Mutant) From Streptococcus Mutans Ua150 In Complex With
Gentiobiose 6-Phosphate
Length = 480
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 196/420 (46%), Gaps = 37/420 (8%)
Query: 3 DMGMDAYRFSIAWSRIFPNG-TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
+MG +R SIAW+RIFP G + N+AG+ Y+ L D L GIEP VTL H++LP L
Sbjct: 81 EMGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHL 140
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+Y G+ +R++I+ F +AE CF+++ D+VK+W+TFNE + D AP S
Sbjct: 141 VTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWMTFNEINNQANYQEDF---APFTNSG 197
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNS 181
+ ++ + Y AH L+ A+ I + ++G + A+ +
Sbjct: 198 I--VYKEGDDREAIMYQAAHYELVASARAVKI---GHAINPNLNIGCMVAMCPIYPATCN 252
Query: 182 TEDAEATQRAQDFQLGWFLDPLMFGDYPSSMR---NRVGSRLPRFTSSEAALLKGSLDFV 238
+D Q+A + +F D + G YP + R ++ + L +G++D++
Sbjct: 253 PKDILMAQKAMQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTVDYI 311
Query: 239 GINHYTTFY--AQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGM 296
G ++Y +F A R + + L KN P ++ W I P+G+
Sbjct: 312 GFSYYMSFVIDAHRENNPYYDYLETEDLV---------KN--PYVKASDWDWQ-IDPQGL 359
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
R +N+ Y P + I +NG + + DD RI Y ++ ++ A+ ED
Sbjct: 360 RYALNWFTDMYHLP-LFIVQNGFGAIDQ--VEADGMVHDDYRIDYLGAHIKEMIKAVDED 416
Query: 357 GCNVKGYFVWSLLDNWEWAAG-YTSRFGLYFVDYKDNQ-----KRYPKNSVQWFKNFLNS 410
G + GY W +D G R+G +VD KD++ KR PK S W+K + S
Sbjct: 417 GVELMGYTPWGCIDLVSAGTGEMRKRYGFIYVD-KDDEGKGTLKRSPKLSFNWYKEVIAS 475
>pdb|3PN8|A Chain A, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
pdb|3PN8|B Chain B, The Crystal Structure Of 6-Phospho-Beta-Glucosidase From
Streptococcus Mutans Ua159
Length = 480
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 119/420 (28%), Positives = 192/420 (45%), Gaps = 37/420 (8%)
Query: 3 DMGMDAYRFSIAWSRIFPNG-TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
+ G +R SIAW+RIFP G + N+AG+ Y+ L D L GIEP VTL H++LP L
Sbjct: 81 EXGFKCFRTSIAWTRIFPKGDEAEPNEAGLQFYDDLFDECLKYGIEPVVTLSHFELPYHL 140
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSI 121
+Y G+ +R++I+ F +AE CF+++ D+VK+W TFNE + D AP S
Sbjct: 141 VTEYGGFTNRKVIDFFVHFAEVCFRRYKDKVKYWXTFNEINNQANYQEDF---APFTNSG 197
Query: 122 LLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNS 181
+ ++ + Y AH L+ A+ I + ++G A+ +
Sbjct: 198 I--VYKEGDDREAIXYQAAHYELVASARAVKI---GHAINPNLNIGCXVAXCPIYPATCN 252
Query: 182 TEDAEATQRAQDFQLGWFLDPLMFGDYPSSMR---NRVGSRLPRFTSSEAALLKGSLDFV 238
+D Q+A + +F D + G YP + R ++ + L +G++D++
Sbjct: 253 PKDILXAQKAXQKRY-YFADVHVHGFYPEHIFKYWERKAIKVDFTERDKKDLFEGTVDYI 311
Query: 239 GINHYTTFY--AQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGM 296
G ++Y +F A R + + L KN P ++ W I P+G+
Sbjct: 312 GFSYYXSFVIDAHRENNPYYDYLETEDLV---------KN--PYVKASDWDWQ-IDPQGL 359
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
R +N+ Y P + I ENG + + DD RI Y ++ + A+ ED
Sbjct: 360 RYALNWFTDXYHLP-LFIVENGFGAIDQ--VEADGXVHDDYRIDYLGAHIKEXIKAVDED 416
Query: 357 GCNVKGYFVWSLLDNWEWAAG-YTSRFGLYFVDYKDNQ-----KRYPKNSVQWFKNFLNS 410
G + GY W +D G R+G +VD KD++ KR PK S W+K + S
Sbjct: 417 GVELXGYTPWGCIDLVSAGTGEXRKRYGFIYVD-KDDEGKGTLKRSPKLSFNWYKEVIAS 475
>pdb|1VFF|A Chain A, Beta-Glycosidase From Pyrococcus Horikoshii
Length = 423
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 188/400 (47%), Gaps = 63/400 (15%)
Query: 1 MKDMGMDAYRFSIAWSRIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQA 60
M +G +AYRFSI WSR+FP + N+ Y ++ID LL +GI P VTL+H+ P
Sbjct: 59 MTSLGYNAYRFSIEWSRLFPE-ENKFNEDAFMKYREIIDLLLTRGITPLVTLHHFTSPLW 117
Query: 61 LDDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCS 120
K G+L + + + Y E + ++VK TFNEP + + GY P
Sbjct: 118 FMKK-GGFLREENLKHWEKYIEKV-AELLEKVKLVATFNEPMVYVMMGYLTAYWPP---- 171
Query: 121 ILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASN 180
F R S + + VA N L HA ++ K+K +GI ++ AS+
Sbjct: 172 -----FIR---SPFKAFKVAANLLKAHAIAYELLHGKFK------VGIVKNIPIILPASD 217
Query: 181 STEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGI 240
D +A ++A + FLD + G Y + R+P+ S+A DF+G+
Sbjct: 218 KERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKT---YRIPQ---SDA-------DFIGV 264
Query: 241 NHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLM 300
N+YT R+ N + LAD I++R + + P+G+ +
Sbjct: 265 NYYTA-SEVRHTWNPLKFFFEVKLAD-------------ISERKTQMGWSVYPKGIYMAL 310
Query: 301 NYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNV 360
+Y P + ITENG+ L D+ R+++ +L + AI EDG +V
Sbjct: 311 K-KASRYGRP-LYITENGI-----------ATLDDEWRVEFIIQHLQYVHKAI-EDGLDV 356
Query: 361 KGYFVWSLLDNWEWAAGYTSRFGLYFVDYKDNQKRYPKNS 400
+GYF WS +DN+EW G+ RFGL VDY+ ++R P+ S
Sbjct: 357 RGYFYWSFMDNYEWKEGFGPRFGLVEVDYQTFERR-PRKS 395
>pdb|2XHY|A Chain A, Crystal Structure Of E.Coli Bgla
pdb|2XHY|B Chain B, Crystal Structure Of E.Coli Bgla
pdb|2XHY|C Chain C, Crystal Structure Of E.Coli Bgla
pdb|2XHY|D Chain D, Crystal Structure Of E.Coli Bgla
Length = 479
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 189/419 (45%), Gaps = 37/419 (8%)
Query: 3 DMGMDAYRFSIAWSRIFPNG-TGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQAL 61
+MG +R SIAW+RIFP G Q N+ G+ Y+ + D LL IEP +TL H+++P L
Sbjct: 82 EMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFEMPLHL 141
Query: 62 DDKYKGWLDRQIINDFATYAETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQAP--GRC 119
+Y W +R++++ F +AE F+++ +VK+W+TFNE + +AP G C
Sbjct: 142 VQQYGSWTNRKVVDFFVRFAEVVFERYKHKVKYWMTFNEINN------QRNWRAPLFGYC 195
Query: 120 SILLHLFCRAGNSATEPYIVAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESAS 179
+ ++ N Y V H+ + A R+ + G + + Y
Sbjct: 196 CSGV-VYTEHENPEETMYQVLHHQFVASALAVKAARRINPEMKVGCMLAMVPLYPYSCNP 254
Query: 180 NSTEDAEATQRAQDFQLGWFLDPLMFGDYPSSMRN---RVGSRLPRFTSSEAALLKGSLD 236
+ A+ + R + F D + G YPS + N R G + L +G+ D
Sbjct: 255 DDVMFAQESMRERYV----FTDVQLRGYYPSYVLNEWERRGFNIKMEDGDLDVLREGTCD 310
Query: 237 FVGINHYTTFYAQRNATNLIGVVLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGM 296
++G ++Y T NA G + G++ P+ +A+ I P G+
Sbjct: 311 YLGFSYYMT-----NAVKAEGGTGDAISGFEGSVPNPYV-------KASDWGWQIDPVGL 358
Query: 297 RSLMNYIKQKYRNPTVIITENGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKED 356
R + + ++Y+ P + I ENG + ++ DD RI Y ++ + A+ D
Sbjct: 359 RYALCELYERYQRP-LFIVENGFGAYDK--VEEDGSINDDYRIDYLRAHIEEMKKAVTYD 415
Query: 357 GCNVKGYFVWSLLDNWEWAAG-YTSRFGLYFVDYKD----NQKRYPKNSVQWFKNFLNS 410
G ++ GY W +D + G Y+ R+G +V+ D + R K S W+K + S
Sbjct: 416 GVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDDGTGDMSRSRKKSFNWYKEVIAS 474
>pdb|3APG|A Chain A, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|B Chain B, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|C Chain C, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
pdb|3APG|D Chain D, Crystal Structure Of Hyperthermophilic Beta-Glucosidase
From Pyrococcus Furiosus
Length = 473
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 187/448 (41%), Gaps = 110/448 (24%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQI-----------------------------NQAGVD 32
+ +GMD R I W+RIFP T + N ++
Sbjct: 70 EKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALE 129
Query: 33 HYNKLIDALLAKGIEPYVTLYHWDLPQALDDKYK-----------GWLDRQIINDFATYA 81
HY K+ +G + LYHW LP + D GWLD + + +F +A
Sbjct: 130 HYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFA 189
Query: 82 ETCFQKFGDRVKHWITFNEPHTFTIQGYDVGLQA---PGRCSILLHLFCRAGNSATEPYI 138
D V W T NEP+ QGY + L++ PG S +A + + +I
Sbjct: 190 AFVAYHLDDLVDMWSTMNEPNVVYNQGY-INLRSGFPPGYLS--FEAAEKAKFNLIQAHI 246
Query: 139 VAHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGW 198
A++A+ K+Y K S+G+ + W++ + +D R +D++
Sbjct: 247 GAYDAI-----------KEYSEK---SVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVT 292
Query: 199 FLDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGV 258
L KG LD++G+N+Y+ +L+ +
Sbjct: 293 ILHS-----------------------------KGKLDWIGVNYYSRLVYGAKDGHLVPL 323
Query: 259 VLNDSLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENG 318
+++ G K+G+P +D ++ P G+ +L+ Y+ Y P +IITENG
Sbjct: 324 PGYGFMSERGGFA---KSGRPASDFGWEMY----PEGLENLLKYLNNAYELP-MIITENG 375
Query: 319 MDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGY 378
M D +R+ P Y +L + A+KE G +V+GY WSL DN+EWA G+
Sbjct: 376 MADAADRYRP-----------HYLVSHLKAVYNAMKE-GADVRGYLHWSLTDNYEWAQGF 423
Query: 379 TSRFGLYFVDYKDNQKRYPKNSVQWFKN 406
RFGL +VD+ + +KRY + S F+
Sbjct: 424 RMRFGLVYVDF-ETKKRYLRPSALVFRE 450
>pdb|4HA3|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Tris
pdb|4HA4|A Chain A, Structure Of Beta-Glycosidase From Acidilobus
Saccharovorans In Complex With Glycerol
Length = 489
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 176/428 (41%), Gaps = 95/428 (22%)
Query: 4 MGMDAYRFSIAWSRIFPNGTGQI----------------------------NQAGVDHYN 35
MG+ A R + WSRIFP T + N+ ++HY
Sbjct: 73 MGLTAARIGVEWSRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYR 132
Query: 36 KLIDALLAKGIEPYVTLYHWDLPQALDDKY----------KGWLDRQIINDFATYAETCF 85
++ L ++GI + LYHW LP L D GWLD + + +FA ++
Sbjct: 133 EMFSDLRSRGITFILNLYHWPLPLWLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVA 192
Query: 86 QKFGDRVKHWITFNEPHTFTIQGYDVGLQAPGRCSILLHLFCRAGNSATEPYIVAHNALL 145
K D V + T NEP+ GY G L L C AG + N +
Sbjct: 193 WKLDDLVYMYSTMNEPNVVWGLGY--AAVKSGFPPGYLCLEC-AGRAMK-------NLVQ 242
Query: 146 THAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDA--EATQRAQDFQLGW-FLDP 202
HA+ D + K G VI+ S DA EA +RA+ F W F D
Sbjct: 243 AHARAYDAVKAITKKPVG--------VIYANSDFTPLTDADREAAERAK-FDNRWAFFDA 293
Query: 203 LMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLND 262
++ G S R+ LKG LD++G+N+YT + + V
Sbjct: 294 VVRGQLGGSTRDD---------------LKGRLDWIGVNYYTRQVVRARGSGYEIVPGYG 338
Query: 263 SLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDP 322
+ ++ G+P +D W + P G+ +++ +Y P +++TENG+ D
Sbjct: 339 HGCEPNGVS---PAGRPCSDFG---WEFY-PEGLYNVLKEYWDRYHLP-LLVTENGIADE 390
Query: 323 NNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRF 382
D +R Y ++ + A+ +DG NV GY WSL DN+EWA+G++ RF
Sbjct: 391 G-----------DYQRPYYLVSHVYQVHRAL-QDGVNVIGYLHWSLADNYEWASGFSKRF 438
Query: 383 GLYFVDYK 390
GL VDY
Sbjct: 439 GLLMVDYS 446
>pdb|1QVB|A Chain A, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
pdb|1QVB|B Chain B, Crystal Structure Of The Beta-Glycosidase From The
Hyperthermophile Thermosphaera Aggregans
Length = 481
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 186/451 (41%), Gaps = 101/451 (22%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQI-----------------------------NQAGVD 32
+ +G++ R + WSRIFP T + N+ V+
Sbjct: 70 EKLGVNTIRVGVEWSRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVN 129
Query: 33 HYNKLIDALLAKGIEPYVTLYHWDLPQAL-----------DDKYKGWLDRQIINDFATYA 81
HY ++ + +G + + LYHW LP L D GWL+ + + +FA YA
Sbjct: 130 HYVEMYKDWVERGRKLILNLYHWPLPLWLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYA 189
Query: 82 ETCFQKFGDRVKHWITFNEPHTFTIQGYDV--GLQAPGRCSILLHLFCRAGNSATEPYIV 139
K G+ W T NEP+ QGY G PG S+ A + A
Sbjct: 190 AYIAWKMGELPVMWSTMNEPNVVYEQGYMFVKGGFPPGYLSL------EAADKAR----- 238
Query: 140 AHNALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGWF 199
N + HA+ D ++ K +G+ + W+E AE + + +L +F
Sbjct: 239 -RNMIQAHARAYDNIKRFSKK----PVGLIYAFQWFELLEGP---AEVFDKFKSSKLYYF 290
Query: 200 LDPLMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVV 259
D + G SS+ N R L LD++G+N+Y + L+ +
Sbjct: 291 TDIVSKG---SSIINVEYRR----------DLANRLDWLGVNYY---------SRLVYKI 328
Query: 260 LNDS---LADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITE 316
++D L G L P P + + + P G+ L+ + +Y +I+TE
Sbjct: 329 VDDKPIILHGYGFLCTP-GGISPAENPCSDFGWEVYPEGLYLLLKELYNRY-GVDLIVTE 386
Query: 317 NGMDDPNNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAA 376
NG+ D +++AL R Y ++ ++ A E G VKGY WSL DN+EWA
Sbjct: 387 NGVSD-------SRDAL----RPAYLVSHVYSVWKAANE-GIPVKGYLHWSLTDNYEWAQ 434
Query: 377 GYTSRFGLYFVDYKDNQKRYPKNSVQWFKNF 407
G+ +FGL VD+K +KRY + S F+
Sbjct: 435 GFRQKFGLVMVDFK-TKKRYLRPSALVFREI 464
>pdb|4EAM|A Chain A, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAM|B Chain B, 1.70a Resolution Structure Of Apo Beta-Glycosidase (W33g)
From Sulfolobus Solfataricus
pdb|4EAN|A Chain A, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
pdb|4EAN|B Chain B, 1.75a Resolution Structure Of Indole Bound
Beta-Glycosidase (W33g) From Sulfolobus Solfataricus
Length = 489
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 184/433 (42%), Gaps = 90/433 (20%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQ---------------------------INQAGVDHY 34
+ MG+ R ++ WSRIFPN + N+ ++HY
Sbjct: 71 QKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 35 NKLIDALLAKGIEPYVTLYHWDLPQALDDKYK----------GWLDRQIINDFATYAETC 84
++ L ++G+ + +YHW LP L D + GWL + + +FA ++
Sbjct: 131 REIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYI 190
Query: 85 FQKFGDRVKHWITFNEPHTFTIQGYDVGLQA--PGRCSILLHLFCRAGNSATEPYIVAHN 142
KF D V + T NEP+ GY PG S L RA +N
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRRA----------MYN 238
Query: 143 ALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGWFLDP 202
+ HA+ D K+ +GI + ++ ++ +D EA + A++ WF D
Sbjct: 239 IIQAHARAYD----GIKSVSKKPVGIIYANSSFQPLTD--KDMEAVEMAENDNRWWFFDA 292
Query: 203 LMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLND 262
++ G+ R ++ R LKG LD++G+N+YT +R + +
Sbjct: 293 IIRGEI-----TRGNEKIVRDD------LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYG 341
Query: 263 SLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDP 322
+ ++++ G P +D W + P G+ ++ +Y + + +TENG+ D
Sbjct: 342 HGCERNSVSLA---GLPTSDFG---WEFF-PEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 NNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRF 382
D +R Y ++ + AI G +V+GY WSL DN+EWA+G++ RF
Sbjct: 394 -----------ADYQRPYYLVSHVYQVHRAINS-GADVRGYLHWSLADNYEWASGFSMRF 441
Query: 383 GLYFVDYKDNQKR 395
GL VDY N KR
Sbjct: 442 GLLKVDY--NTKR 452
>pdb|1UWQ|A Chain A, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWQ|B Chain B, Structure Of Beta-glycosidase From Sulfolobus Solfataricus
pdb|1UWR|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWR|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Galactose
pdb|1UWS|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWS|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With 2-Deoxy-2-Fluoro-Glucose
pdb|1UWT|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWT|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Galactohydroximo-1,5-Lactam
pdb|1UWU|A Chain A, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|1UWU|B Chain B, Structure Of Beta-Glycosidase From Sulfolobus Solfataricus
In Complex With D-Glucohydroximo-1,5-Lactam
pdb|2CEQ|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CEQ|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Glucoimidazole
pdb|2CER|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
pdb|2CER|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus In Complex
With Phenethyl-Substituted Glucoimidazole
Length = 489
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 184/433 (42%), Gaps = 90/433 (20%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQ---------------------------INQAGVDHY 34
+ MG+ R ++ WSRIFPN + N+ ++HY
Sbjct: 71 QKMGLKIARLNVEWSRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 35 NKLIDALLAKGIEPYVTLYHWDLPQALDDKYK----------GWLDRQIINDFATYAETC 84
++ L ++G+ + +YHW LP L D + GWL + + +FA ++
Sbjct: 131 REIFKDLKSRGLYFILNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYI 190
Query: 85 FQKFGDRVKHWITFNEPHTFTIQGYDVGLQA--PGRCSILLHLFCRAGNSATEPYIVAHN 142
KF D V + T NEP+ GY PG S L RA +N
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRRA----------MYN 238
Query: 143 ALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGWFLDP 202
+ HA+ D K+ +GI + ++ ++ +D EA + A++ WF D
Sbjct: 239 IIQAHARAYD----GIKSVSKKPVGIIYANSSFQPLTD--KDMEAVEMAENDNRWWFFDA 292
Query: 203 LMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLND 262
++ G+ R ++ R LKG LD++G+N+YT +R + +
Sbjct: 293 IIRGEI-----TRGNEKIVRDD------LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYG 341
Query: 263 SLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDP 322
+ ++++ G P +D W + P G+ ++ +Y + + +TENG+ D
Sbjct: 342 HGCERNSVSLA---GLPTSDFG---WEFF-PEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 NNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRF 382
D +R Y ++ + AI G +V+GY WSL DN+EWA+G++ RF
Sbjct: 394 -----------ADYQRPYYLVSHVYQVHRAINS-GADVRGYLHWSLADNYEWASGFSMRF 441
Query: 383 GLYFVDYKDNQKR 395
GL VDY N KR
Sbjct: 442 GLLKVDY--NTKR 452
>pdb|1UWI|A Chain A, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|B Chain B, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|C Chain C, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
pdb|1UWI|D Chain D, Crystal Structure Of Mutated Beta-Glycosidase From
Sulfolobus Solfataricus, Working At Moderate Temperature
Length = 489
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 181/433 (41%), Gaps = 90/433 (20%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQ---------------------------INQAGVDHY 34
+ MG+ R + WSR FPN + N+ ++HY
Sbjct: 71 QKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 35 NKLIDALLAKGIEPYVTLYHWDLPQALDDKYK----------GWLDRQIINDFATYAETC 84
++ L ++G+ +YHW LP L D + GWL + + +FA ++
Sbjct: 131 REIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYT 190
Query: 85 FQKFGDRVKHWITFNEPHTFTIQGYDVGLQA--PGRCSILLHLFCRAGNSATEPYIVAHN 142
KF D V + T NEP+ GY PG S L RA +N
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRRA----------MYN 238
Query: 143 ALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGWFLDP 202
+ HA+ D K+ +GI + ++ ++ +D EA + A++ WF D
Sbjct: 239 IIQAHARAYD----GIKSVSKKPVGIIYANSSFQPLTD--KDMEAVEMAENDNRWWFFDA 292
Query: 203 LMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLND 262
++ G+ R ++ R LKG LD++G+N+YT +R + +
Sbjct: 293 IIRGEI-----TRGNEKIVRDD------LKGRLDWIGVNYYTRTVVKRTGKGYVSLGGYG 341
Query: 263 SLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDP 322
+ ++++ G P +D W + P G+ ++ +Y + + +TENG+ D
Sbjct: 342 HGCERNSVSLA---GLPTSDFG---WEFF-PEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 NNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRF 382
D +R Y ++ + AI G +V+GY WSL DN+EWA+G++ RF
Sbjct: 394 -----------ADYQRPYYLVSHVYQVHRAINS-GADVRGYLHWSLADNYEWASGFSMRF 441
Query: 383 GLYFVDYKDNQKR 395
GL VDY N KR
Sbjct: 442 GLLKVDY--NTKR 452
>pdb|1GOW|A Chain A, Beta-Glycosidase From Sulfolobus Solfataricus
pdb|1GOW|B Chain B, Beta-Glycosidase From Sulfolobus Solfataricus
Length = 489
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/433 (25%), Positives = 181/433 (41%), Gaps = 90/433 (20%)
Query: 2 KDMGMDAYRFSIAWSRIFPNGTGQ---------------------------INQAGVDHY 34
+ MG+ R + WSR FPN + N+ ++HY
Sbjct: 71 QKMGLKIARLNSEWSRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHY 130
Query: 35 NKLIDALLAKGIEPYVTLYHWDLPQALDDKYK----------GWLDRQIINDFATYAETC 84
++ L ++G+ +YHW LP L D + GWL + + +FA ++
Sbjct: 131 REIFKDLKSRGLYFIQNMYHWPLPLWLHDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYT 190
Query: 85 FQKFGDRVKHWITFNEPHTFTIQGYDVGLQA--PGRCSILLHLFCRAGNSATEPYIVAHN 142
KF D V + T NEP+ GY PG S L RA +N
Sbjct: 191 AWKFDDLVDEYSTMNEPNVVGGLGYVGVKSGFPPGYLS--FELSRRA----------MYN 238
Query: 143 ALLTHAKVADIYRKKYKAKQGGSLGIAFDVIWYESASNSTEDAEATQRAQDFQLGWFLDP 202
+ HA+ D K+ +GI + ++ ++ +D EA + A++ WF D
Sbjct: 239 IIQAHARAYD----GIKSVSKKPVGIIYANSSFQPLTD--KDMEAVEMAENDNRWWFFDA 292
Query: 203 LMFGDYPSSMRNRVGSRLPRFTSSEAALLKGSLDFVGINHYTTFYAQRNATNLIGVVLND 262
++ G+ R ++ R LKG LD++G+N+YT +R + +
Sbjct: 293 IIRGEI-----TRGNEKIVRDD------LKGRLDWIGVNYYTRTVVKRTEKGYVSLGGYG 341
Query: 263 SLADAGALTIPFKNGKPIADRANSIWLYIVPRGMRSLMNYIKQKYRNPTVIITENGMDDP 322
+ ++++ G P +D W + P G+ ++ +Y + + +TENG+ D
Sbjct: 342 HGCERNSVSLA---GLPTSDFG---WEFF-PEGLYDVLTKYWNRY-HLYMYVTENGIADD 393
Query: 323 NNRFTPTKEALKDDKRIKYHNDYLTNLLAAIKEDGCNVKGYFVWSLLDNWEWAAGYTSRF 382
D +R Y ++ + AI G +V+GY WSL DN+EWA+G++ RF
Sbjct: 394 -----------ADYQRPYYLVSHVYQVHRAINS-GADVRGYLHWSLADNYEWASGFSMRF 441
Query: 383 GLYFVDYKDNQKR 395
GL VDY N KR
Sbjct: 442 GLLKVDY--NTKR 452
>pdb|3AYH|B Chain B, Crystal Structure Of The C1725 SUBCOMPLEX FROM S. POMBE
RNA Polymerase Iii
Length = 203
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 322 PNNRFTPTKEALKDDKRIKYHNDYLTNLLAAI 353
P+N + PTKEAL ++ KY N + N+ AI
Sbjct: 15 PSNFWKPTKEALAEEIHKKYANKVIQNIGLAI 46
>pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase
Length = 320
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 1 MKDMGMDAYRFSIAWS-RIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K+ G D+ R I WS I +I++ +D ++D L + + +H++
Sbjct: 50 IKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELY 109
Query: 60 ALDDKYKGWLD---RQIINDFATYAETCFQKFGDRVKHWITFNEP 101
DKY L +Q+ F Y + F + FNEP
Sbjct: 110 QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEI---------FNEP 145
>pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic
Endo-Beta-1,4-Glucanase In Complex With Substrate
Length = 320
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 1 MKDMGMDAYRFSIAWS-RIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K+ G D+ R I WS I +I++ +D ++D L + + +H++
Sbjct: 50 IKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELY 109
Query: 60 ALDDKYKGWLD---RQIINDFATYAETCFQKFGDRVKHWITFNEP 101
DKY L +Q+ F Y + F + FNEP
Sbjct: 110 QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFE---------IFNEP 145
>pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
pdb|3NCO|B Chain B, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1
Length = 320
Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 1 MKDMGMDAYRFSIAWS-RIFPNGTGQINQAGVDHYNKLIDALLAKGIEPYVTLYHWDLPQ 59
+K+ G D+ R I WS I +I++ +D ++D L + + +H++
Sbjct: 50 IKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELY 109
Query: 60 ALDDKYKGWLD---RQIINDFATYAETCFQKFGDRVKHWITFNEP 101
DKY L +Q+ F Y + F + FNEP
Sbjct: 110 QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEI---------FNEP 145
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,815,720
Number of Sequences: 62578
Number of extensions: 618093
Number of successful extensions: 2098
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1678
Number of HSP's gapped (non-prelim): 95
length of query: 412
length of database: 14,973,337
effective HSP length: 101
effective length of query: 311
effective length of database: 8,652,959
effective search space: 2691070249
effective search space used: 2691070249
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)