Query 015167
Match_columns 412
No_of_seqs 424 out of 2849
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 07:51:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015167.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015167hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h87_A Kanadaptin; FHA domain 99.8 3.9E-19 1.3E-23 148.3 11.5 99 273-386 19-128 (130)
2 3va4_A Mediator of DNA damage 99.8 1.2E-18 4.1E-23 145.6 10.8 92 287-393 37-130 (132)
3 1uht_A Expressed protein; FHA 99.8 2.2E-18 7.6E-23 141.8 11.9 105 273-394 11-116 (118)
4 3gqs_A Adenylate cyclase-like 99.8 2.4E-18 8.2E-23 138.8 11.5 100 272-389 2-102 (106)
5 2pie_A E3 ubiquitin-protein li 99.8 8.1E-18 2.8E-22 142.2 13.0 102 272-389 7-117 (138)
6 3els_A PRE-mRNA leakage protei 99.7 8.4E-18 2.9E-22 144.7 9.7 110 272-389 29-156 (158)
7 2csw_A Ubiquitin ligase protei 99.7 1.1E-17 3.7E-22 142.5 8.1 102 272-389 15-125 (145)
8 2xt9_B Putative signal transdu 99.7 4.8E-17 1.7E-21 133.1 11.5 97 272-389 9-105 (115)
9 2jpe_A Nuclear inhibitor of pr 99.7 2.6E-18 9E-23 145.6 4.0 95 273-380 33-129 (140)
10 4hb9_A Similarities with proba 99.7 1.5E-16 5.2E-21 157.4 16.6 269 9-312 40-325 (412)
11 1lgp_A Cell cycle checkpoint p 99.7 3.6E-17 1.2E-21 134.2 9.5 87 288-389 17-111 (116)
12 2kb3_A Oxoglutarate dehydrogen 99.7 7.9E-17 2.7E-21 136.5 11.7 96 272-388 44-139 (143)
13 1gxc_A CHK2, CDS1, serine/thre 99.7 1.1E-16 3.6E-21 137.1 12.2 101 272-390 27-142 (149)
14 3po8_A RV0020C protein, putati 99.7 4.8E-17 1.6E-21 129.7 9.4 81 288-388 16-96 (100)
15 1dmz_A Protein (protein kinase 99.7 1.1E-16 3.8E-21 138.1 11.6 100 277-391 8-127 (158)
16 3elv_A PRE-mRNA leakage protei 99.7 6E-17 2.1E-21 143.4 9.8 110 272-389 76-203 (205)
17 1mzk_A Kinase associated prote 99.7 2.3E-16 7.9E-21 133.4 12.9 102 274-389 7-119 (139)
18 2kfu_A RV1827 PThr 22; FHA dom 99.7 1.7E-16 5.7E-21 137.0 11.8 97 272-389 53-149 (162)
19 2jqj_A DNA damage response pro 99.7 1.8E-16 6.3E-21 135.9 11.0 89 287-392 29-125 (151)
20 1r21_A Antigen KI-67; beta san 99.7 1E-16 3.4E-21 133.8 9.0 77 299-390 33-109 (128)
21 1qu5_A Protein kinase SPK1; FH 99.7 1E-16 3.5E-21 141.2 7.1 105 272-391 26-151 (182)
22 3oun_A Putative uncharacterize 99.6 4.4E-16 1.5E-20 133.0 9.9 75 288-379 78-152 (157)
23 1g6g_A Protein kinase RAD53; b 99.6 5.4E-16 1.9E-20 129.1 10.0 80 299-389 36-120 (127)
24 1g3g_A Protien kinase SPK1; FH 99.6 6E-16 2.1E-20 134.4 10.1 104 274-389 33-148 (164)
25 3hx1_A SLR1951 protein; P74513 99.6 9.7E-16 3.3E-20 128.0 10.1 80 288-384 23-112 (131)
26 3rp8_A Flavoprotein monooxygen 99.6 6.4E-15 2.2E-19 146.5 17.9 253 7-312 58-315 (407)
27 1wln_A Afadin; beta sandwich, 99.6 1.2E-15 4.1E-20 125.7 10.2 79 299-389 36-114 (120)
28 2ff4_A Probable regulatory pro 99.5 1.1E-14 3.8E-19 144.2 10.0 87 288-393 299-385 (388)
29 3fm8_A Kinesin-like protein KI 99.5 1.5E-13 5.2E-18 112.9 11.4 96 274-387 26-122 (124)
30 4ejq_A Kinesin-like protein KI 99.5 2.2E-13 7.4E-18 116.9 12.3 103 274-389 38-144 (154)
31 3huf_A DNA repair and telomere 99.4 5.4E-13 1.8E-17 124.5 10.0 101 275-389 2-114 (325)
32 3kt9_A Aprataxin; FHA domain, 99.3 4.1E-11 1.4E-15 94.3 11.5 94 275-388 5-100 (102)
33 3c96_A Flavin-containing monoo 99.2 2.1E-10 7E-15 114.0 14.4 126 7-140 40-174 (410)
34 2vou_A 2,6-dihydroxypyridine h 99.2 2.6E-10 9E-15 112.7 13.9 117 8-140 42-158 (397)
35 2x3n_A Probable FAD-dependent 99.1 4.1E-10 1.4E-14 111.3 13.8 125 8-140 42-171 (399)
36 4a0e_A YSCD, type III secretio 99.1 3.6E-10 1.2E-14 91.4 10.2 98 273-392 3-101 (123)
37 1pn0_A Phenol 2-monooxygenase; 99.1 6.2E-10 2.1E-14 117.5 14.0 128 7-140 48-235 (665)
38 3uv0_A Mutator 2, isoform B; F 99.1 2E-10 6.9E-15 88.5 7.3 67 298-379 20-93 (102)
39 2qa2_A CABE, polyketide oxygen 99.1 9.6E-10 3.3E-14 112.2 13.6 120 7-140 47-171 (499)
40 3alj_A 2-methyl-3-hydroxypyrid 99.1 1.7E-09 5.9E-14 106.1 14.8 117 8-140 47-165 (379)
41 2r0c_A REBC; flavin adenine di 99.1 1.5E-09 5E-14 112.2 14.7 129 7-140 61-201 (549)
42 2xdo_A TETX2 protein; tetracyc 99.0 1E-09 3.5E-14 108.5 12.2 122 9-140 65-187 (398)
43 2qa1_A PGAE, polyketide oxygen 99.0 1.6E-09 5.6E-14 110.5 13.4 119 8-140 47-170 (500)
44 2brf_A Bifunctional polynucleo 99.0 1.7E-09 5.7E-14 86.0 9.8 98 272-388 7-106 (110)
45 3i6u_A CDS1, serine/threonine- 98.9 1.9E-09 6.6E-14 107.4 9.9 100 273-389 8-121 (419)
46 2dkh_A 3-hydroxybenzoate hydro 98.9 5.3E-09 1.8E-13 109.9 13.8 128 7-140 68-216 (639)
47 3ihg_A RDME; flavoenzyme, anth 98.9 4.7E-09 1.6E-13 108.0 12.4 131 7-140 40-188 (535)
48 3fmw_A Oxygenase; mithramycin, 98.9 1.6E-09 5.6E-14 112.2 6.2 124 7-140 84-212 (570)
49 1k0i_A P-hydroxybenzoate hydro 98.9 8.1E-09 2.8E-13 101.6 10.6 121 9-140 42-168 (394)
50 1yj5_C 5' polynucleotide kinas 98.8 1.9E-08 6.4E-13 82.8 9.6 98 273-389 8-107 (143)
51 4egx_A Kinesin-like protein KI 98.8 5.2E-08 1.8E-12 85.5 11.9 102 274-389 68-174 (184)
52 1ujx_A Polynucleotide kinase 3 98.8 1E-08 3.4E-13 82.5 6.2 97 274-389 16-114 (119)
53 3i3l_A Alkylhalidase CMLS; fla 98.7 1.7E-07 5.9E-12 97.4 14.5 127 8-138 58-191 (591)
54 3nix_A Flavoprotein/dehydrogen 98.7 2.5E-07 8.5E-12 91.6 14.3 124 10-140 42-171 (421)
55 3e1t_A Halogenase; flavoprotei 98.5 4.7E-07 1.6E-11 92.5 13.0 126 9-140 43-177 (512)
56 1wv3_A Similar to DNA segregat 98.4 2.3E-07 8E-12 85.0 6.2 65 299-379 92-162 (238)
57 2pyx_A Tryptophan halogenase; 98.4 2.3E-06 8E-11 87.6 13.3 127 7-137 53-235 (526)
58 2weu_A Tryptophan 5-halogenase 98.4 2.6E-06 8.9E-11 86.8 12.7 64 73-137 165-232 (511)
59 3cgv_A Geranylgeranyl reductas 98.2 1.5E-06 5E-11 85.1 7.3 110 21-139 51-166 (397)
60 3oz2_A Digeranylgeranylglycero 98.2 2.3E-06 7.7E-11 83.3 8.4 64 75-138 96-165 (397)
61 2e4g_A Tryptophan halogenase; 98.2 8E-06 2.7E-10 84.1 11.8 64 73-137 186-254 (550)
62 3atr_A Conserved archaeal prot 98.2 3.7E-06 1.3E-10 84.4 8.4 64 76-139 95-166 (453)
63 2aqj_A Tryptophan halogenase, 98.1 1.5E-05 5.2E-10 81.7 12.0 64 73-137 157-224 (538)
64 2gmh_A Electron transfer flavo 97.6 0.00013 4.4E-09 75.6 9.6 67 76-142 139-225 (584)
65 3c4a_A Probable tryptophan hyd 97.6 8.1E-06 2.8E-10 79.9 -0.2 106 8-140 38-147 (381)
66 1yvv_A Amine oxidase, flavin-c 96.8 0.0017 5.8E-08 61.5 6.7 58 80-140 109-167 (336)
67 2bry_A NEDD9 interacting prote 96.8 0.001 3.5E-08 67.4 5.0 64 76-139 161-234 (497)
68 3v76_A Flavoprotein; structura 96.6 0.0038 1.3E-07 61.8 7.7 59 77-136 128-188 (417)
69 2ywl_A Thioredoxin reductase r 96.5 0.0044 1.5E-07 53.2 6.6 58 78-137 53-112 (180)
70 2i0z_A NAD(FAD)-utilizing dehy 96.4 0.0068 2.3E-07 60.3 8.1 56 80-135 133-191 (447)
71 3nlc_A Uncharacterized protein 96.3 0.0057 1.9E-07 62.7 7.3 60 78-137 217-279 (549)
72 2oln_A NIKD protein; flavoprot 96.3 0.0098 3.4E-07 57.8 8.6 59 77-136 149-209 (397)
73 3dje_A Fructosyl amine: oxygen 96.3 0.01 3.6E-07 58.5 8.7 60 77-136 157-222 (438)
74 3dme_A Conserved exported prot 96.2 0.0094 3.2E-07 56.8 7.9 61 77-137 146-211 (369)
75 2cul_A Glucose-inhibited divis 96.2 0.0091 3.1E-07 53.7 7.0 61 79-140 66-130 (232)
76 3ps9_A TRNA 5-methylaminomethy 95.9 0.018 6.2E-07 60.4 9.0 62 76-137 412-475 (676)
77 1y56_B Sarcosine oxidase; dehy 95.8 0.018 6.3E-07 55.4 7.6 60 77-137 145-207 (382)
78 2gf3_A MSOX, monomeric sarcosi 95.7 0.021 7.1E-07 55.1 7.6 59 77-136 146-206 (389)
79 3nyc_A D-arginine dehydrogenas 95.7 0.016 5.3E-07 55.7 6.6 61 76-137 149-211 (381)
80 2uzz_A N-methyl-L-tryptophan o 95.6 0.027 9.1E-07 54.0 8.0 59 77-136 145-205 (372)
81 1ryi_A Glycine oxidase; flavop 95.5 0.013 4.3E-07 56.5 5.3 59 77-136 160-220 (382)
82 1rp0_A ARA6, thiazole biosynth 95.4 0.043 1.5E-06 50.9 8.4 59 79-137 117-193 (284)
83 3c4n_A Uncharacterized protein 95.2 0.011 3.7E-07 58.0 3.8 60 76-136 167-237 (405)
84 3pvc_A TRNA 5-methylaminomethy 95.2 0.031 1.1E-06 58.8 7.5 61 77-137 408-471 (689)
85 4a9w_A Monooxygenase; baeyer-v 95.2 0.033 1.1E-06 52.6 7.1 59 78-137 73-134 (357)
86 2gv8_A Monooxygenase; FMO, FAD 95.2 0.028 9.5E-07 55.7 6.8 61 77-137 111-179 (447)
87 2gqf_A Hypothetical protein HI 95.1 0.031 1.1E-06 54.8 6.7 57 79-136 107-169 (401)
88 3ab1_A Ferredoxin--NADP reduct 95.1 0.058 2E-06 51.5 8.5 60 78-137 71-133 (360)
89 2q0l_A TRXR, thioredoxin reduc 94.9 0.054 1.9E-06 50.3 7.5 60 77-137 55-116 (311)
90 2zbw_A Thioredoxin reductase; 94.7 0.093 3.2E-06 49.3 8.5 60 78-137 62-123 (335)
91 3gwf_A Cyclohexanone monooxyge 94.6 0.08 2.8E-06 54.0 8.4 61 77-137 83-149 (540)
92 2v3a_A Rubredoxin reductase; a 94.6 0.082 2.8E-06 51.1 8.1 58 82-139 188-247 (384)
93 3cp8_A TRNA uridine 5-carboxym 94.5 0.082 2.8E-06 54.8 8.2 62 76-138 112-177 (641)
94 2gag_B Heterotetrameric sarcos 94.4 0.062 2.1E-06 52.0 6.8 59 77-136 170-231 (405)
95 1qo8_A Flavocytochrome C3 fuma 94.3 0.085 2.9E-06 54.0 7.8 69 78-146 247-323 (566)
96 2yqu_A 2-oxoglutarate dehydrog 94.0 0.092 3.1E-06 52.1 7.1 57 82-138 209-267 (455)
97 1vdc_A NTR, NADPH dependent th 93.9 0.056 1.9E-06 50.8 5.3 59 77-137 66-126 (333)
98 3ces_A MNMG, tRNA uridine 5-ca 93.9 0.11 3.6E-06 54.1 7.6 62 76-138 119-184 (651)
99 3jsk_A Cypbp37 protein; octame 93.9 0.15 5.3E-06 48.7 8.2 65 76-140 155-257 (344)
100 1w4x_A Phenylacetone monooxyge 93.9 0.091 3.1E-06 53.5 7.0 60 78-137 91-156 (542)
101 3i6d_A Protoporphyrinogen oxid 93.5 0.14 4.7E-06 50.5 7.5 59 82-140 236-294 (470)
102 1y0p_A Fumarate reductase flav 93.3 0.2 6.8E-06 51.3 8.5 62 79-140 253-322 (571)
103 2qcu_A Aerobic glycerol-3-phos 93.2 0.18 6.3E-06 50.7 8.0 61 77-137 145-212 (501)
104 3qj4_A Renalase; FAD/NAD(P)-bi 93.2 0.14 4.8E-06 48.4 6.7 52 81-133 112-163 (342)
105 2zxi_A TRNA uridine 5-carboxym 93.1 0.19 6.4E-06 52.1 7.8 64 76-140 118-185 (637)
106 3axb_A Putative oxidoreductase 92.9 0.16 5.5E-06 50.0 6.9 60 76-136 176-255 (448)
107 4dgk_A Phytoene dehydrogenase; 92.9 0.18 6.2E-06 50.3 7.4 57 81-137 221-280 (501)
108 4ap3_A Steroid monooxygenase; 92.8 0.2 6.9E-06 51.1 7.5 61 77-137 95-161 (549)
109 1pj5_A N,N-dimethylglycine oxi 92.7 0.22 7.6E-06 53.4 8.0 60 77-137 147-209 (830)
110 2r9z_A Glutathione amide reduc 92.5 0.27 9.3E-06 48.9 7.9 57 82-138 208-267 (463)
111 1fl2_A Alkyl hydroperoxide red 92.4 0.22 7.6E-06 46.0 6.8 60 78-137 53-117 (310)
112 1ges_A Glutathione reductase; 92.4 0.19 6.5E-06 49.8 6.6 57 82-138 209-268 (450)
113 3o0h_A Glutathione reductase; 92.1 0.2 6.9E-06 50.1 6.5 56 83-138 234-291 (484)
114 2eq6_A Pyruvate dehydrogenase 92.1 0.29 1E-05 48.6 7.6 57 82-138 211-274 (464)
115 3da1_A Glycerol-3-phosphate de 91.8 0.26 8.9E-06 50.4 6.9 61 77-137 166-234 (561)
116 1rsg_A FMS1 protein; FAD bindi 91.4 0.27 9.1E-06 49.5 6.5 55 80-134 201-256 (516)
117 3fbs_A Oxidoreductase; structu 91.4 0.4 1.4E-05 43.8 7.2 60 77-137 52-114 (297)
118 1b37_A Protein (polyamine oxid 91.3 0.36 1.2E-05 47.9 7.3 53 82-134 207-269 (472)
119 1s3e_A Amine oxidase [flavin-c 90.9 0.3 1E-05 49.2 6.2 57 81-138 215-271 (520)
120 2xve_A Flavin-containing monoo 90.9 0.36 1.2E-05 48.0 6.8 62 77-138 97-169 (464)
121 3lzw_A Ferredoxin--NADP reduct 90.7 0.6 2E-05 43.3 7.8 59 78-137 64-125 (332)
122 2jae_A L-amino acid oxidase; o 90.6 0.39 1.3E-05 47.8 6.8 54 81-134 239-295 (489)
123 3cty_A Thioredoxin reductase; 90.6 0.49 1.7E-05 44.0 7.1 59 77-137 68-128 (319)
124 2q7v_A Thioredoxin reductase; 90.6 0.38 1.3E-05 44.9 6.3 60 77-137 61-125 (325)
125 1kf6_A Fumarate reductase flav 90.6 0.47 1.6E-05 48.9 7.5 58 80-137 133-199 (602)
126 1d4d_A Flavocytochrome C fumar 90.5 0.71 2.4E-05 47.2 8.7 66 79-144 253-326 (572)
127 1m6i_A Programmed cell death p 90.5 0.63 2.2E-05 46.6 8.2 57 82-138 227-285 (493)
128 3uox_A Otemo; baeyer-villiger 90.4 0.37 1.3E-05 49.0 6.5 61 77-137 83-149 (545)
129 2a87_A TRXR, TR, thioredoxin r 90.4 0.34 1.2E-05 45.5 5.9 59 77-137 67-128 (335)
130 3iwa_A FAD-dependent pyridine 90.3 0.53 1.8E-05 46.7 7.4 57 82-138 203-261 (472)
131 1xdi_A RV3303C-LPDA; reductase 90.3 0.49 1.7E-05 47.4 7.2 57 82-138 224-282 (499)
132 3fg2_P Putative rubredoxin red 90.3 0.65 2.2E-05 45.0 7.9 59 82-140 185-246 (404)
133 1trb_A Thioredoxin reductase; 90.2 0.44 1.5E-05 44.1 6.3 59 77-137 58-118 (320)
134 3k7m_X 6-hydroxy-L-nicotine ox 90.0 0.38 1.3E-05 46.8 6.0 51 82-134 208-258 (431)
135 2vvm_A Monoamine oxidase N; FA 89.1 0.7 2.4E-05 46.0 7.2 55 81-135 255-312 (495)
136 3d1c_A Flavin-containing putat 88.9 0.82 2.8E-05 43.2 7.3 58 78-136 85-144 (369)
137 3lxd_A FAD-dependent pyridine 88.9 0.89 3.1E-05 44.2 7.7 59 82-140 195-256 (415)
138 3lov_A Protoporphyrinogen oxid 88.6 0.56 1.9E-05 46.4 6.1 59 81-140 236-294 (475)
139 2wpf_A Trypanothione reductase 88.5 0.8 2.7E-05 45.9 7.2 57 82-138 236-295 (495)
140 1fec_A Trypanothione reductase 88.4 0.75 2.6E-05 46.0 6.9 57 82-138 232-291 (490)
141 2hqm_A GR, grase, glutathione 88.4 0.68 2.3E-05 46.1 6.6 56 82-137 227-287 (479)
142 1ebd_A E3BD, dihydrolipoamide 88.4 0.75 2.6E-05 45.4 6.8 57 82-138 212-273 (455)
143 1mo9_A ORF3; nucleotide bindin 88.3 0.62 2.1E-05 47.0 6.3 57 82-138 256-319 (523)
144 1hyu_A AHPF, alkyl hydroperoxi 88.2 0.69 2.4E-05 46.7 6.6 60 78-137 264-328 (521)
145 3itj_A Thioredoxin reductase 1 88.1 0.78 2.7E-05 42.6 6.4 60 77-137 80-144 (338)
146 2gjc_A Thiazole biosynthetic e 87.3 1.7 6E-05 41.0 8.3 65 76-140 141-245 (326)
147 1onf_A GR, grase, glutathione 87.3 1.3 4.5E-05 44.3 7.9 57 81-137 217-277 (500)
148 3ef6_A Toluene 1,2-dioxygenase 87.2 0.71 2.4E-05 44.9 5.7 58 83-140 187-246 (410)
149 1q1r_A Putidaredoxin reductase 86.9 1 3.5E-05 44.1 6.7 58 83-140 193-255 (431)
150 3f8d_A Thioredoxin reductase ( 86.6 1.5 5.1E-05 40.3 7.4 59 78-137 67-127 (323)
151 4gut_A Lysine-specific histone 85.9 0.92 3.2E-05 48.2 6.1 49 82-133 535-583 (776)
152 1ojt_A Surface protein; redox- 85.9 0.92 3.2E-05 45.1 5.9 57 83-139 228-290 (482)
153 3nrn_A Uncharacterized protein 85.4 1.4 4.7E-05 42.8 6.7 58 81-140 189-248 (421)
154 2qae_A Lipoamide, dihydrolipoy 85.2 1.4 4.7E-05 43.6 6.7 56 83-138 217-279 (468)
155 3ka7_A Oxidoreductase; structu 84.9 1.9 6.6E-05 41.6 7.6 59 81-140 196-257 (425)
156 1v59_A Dihydrolipoamide dehydr 84.4 1.4 4.9E-05 43.6 6.5 57 82-138 225-290 (478)
157 2ivd_A PPO, PPOX, protoporphyr 84.4 0.71 2.4E-05 45.6 4.2 59 81-140 238-299 (478)
158 1dxl_A Dihydrolipoamide dehydr 84.1 1.2 4.2E-05 43.9 5.8 57 82-138 219-282 (470)
159 1zmd_A Dihydrolipoyl dehydroge 83.8 2.1 7.2E-05 42.3 7.4 57 82-138 221-285 (474)
160 3oc4_A Oxidoreductase, pyridin 83.6 2.5 8.4E-05 41.6 7.7 55 82-137 190-246 (452)
161 3s5w_A L-ornithine 5-monooxyge 83.5 1.6 5.6E-05 42.8 6.4 60 78-137 124-194 (463)
162 2iid_A L-amino-acid oxidase; f 83.5 1.6 5.5E-05 43.3 6.4 53 81-134 241-297 (498)
163 3ntd_A FAD-dependent pyridine 83.5 2.4 8.2E-05 42.9 7.8 57 82-138 193-270 (565)
164 2a8x_A Dihydrolipoyl dehydroge 83.3 2.1 7E-05 42.3 7.0 56 83-138 214-274 (464)
165 2a8x_A Dihydrolipoyl dehydroge 83.3 1.2 4.1E-05 44.0 5.3 43 92-137 104-148 (464)
166 3urh_A Dihydrolipoyl dehydroge 82.7 2.9 9.9E-05 41.5 7.9 55 83-137 241-302 (491)
167 3p1w_A Rabgdi protein; GDI RAB 82.5 1.9 6.4E-05 43.0 6.3 54 81-134 256-313 (475)
168 2yg5_A Putrescine oxidase; oxi 82.2 1.5 5.3E-05 42.8 5.6 52 81-134 215-267 (453)
169 4at0_A 3-ketosteroid-delta4-5a 81.9 3.6 0.00012 41.2 8.3 56 82-137 203-266 (510)
170 2e5v_A L-aspartate oxidase; ar 81.8 1.7 5.8E-05 43.2 5.7 57 80-137 118-178 (472)
171 2cdu_A NADPH oxidase; flavoenz 81.4 3.4 0.00012 40.5 7.8 57 82-138 192-250 (452)
172 2rgh_A Alpha-glycerophosphate 81.3 2.9 9.8E-05 42.7 7.4 60 78-137 185-252 (571)
173 1d5t_A Guanine nucleotide diss 81.1 1.4 4.7E-05 43.3 4.7 56 81-136 234-291 (433)
174 2gqw_A Ferredoxin reductase; f 80.7 3.1 0.00011 40.2 7.2 53 83-139 189-243 (408)
175 2z3y_A Lysine-specific histone 80.4 2.1 7.1E-05 44.6 6.0 48 82-132 402-455 (662)
176 1zk7_A HGII, reductase, mercur 80.2 4.3 0.00015 40.0 8.1 55 82-137 217-273 (467)
177 3lad_A Dihydrolipoamide dehydr 80.2 3.4 0.00011 40.8 7.3 55 83-137 223-282 (476)
178 1chu_A Protein (L-aspartate ox 80.1 1.3 4.5E-05 44.9 4.3 56 82-137 139-210 (540)
179 4dna_A Probable glutathione re 79.8 2.6 8.8E-05 41.6 6.3 55 83-138 213-271 (463)
180 1sez_A Protoporphyrinogen oxid 79.6 2.5 8.7E-05 41.9 6.2 54 81-134 243-307 (504)
181 2b9w_A Putative aminooxidase; 79.6 2.5 8.5E-05 40.9 6.0 52 81-134 206-257 (424)
182 1trb_A Thioredoxin reductase; 79.1 3.9 0.00013 37.6 7.0 57 82-138 185-250 (320)
183 2h88_A Succinate dehydrogenase 78.8 5.3 0.00018 41.2 8.4 57 81-137 155-219 (621)
184 3ic9_A Dihydrolipoamide dehydr 78.5 4.3 0.00015 40.4 7.5 57 82-138 216-277 (492)
185 2wdq_A Succinate dehydrogenase 76.3 6 0.0002 40.5 8.0 57 81-137 143-208 (588)
186 3s5w_A L-ornithine 5-monooxyge 76.3 6.4 0.00022 38.4 8.0 45 92-136 329-378 (463)
187 2xag_A Lysine-specific histone 76.1 3.3 0.00011 44.5 6.1 47 82-131 573-625 (852)
188 2bcg_G Secretory pathway GDP d 75.9 3.9 0.00013 40.2 6.3 55 82-136 243-301 (453)
189 1q1r_A Putidaredoxin reductase 74.9 2.4 8.1E-05 41.5 4.3 43 93-137 74-116 (431)
190 1dxl_A Dihydrolipoamide dehydr 74.7 3.1 0.00011 41.0 5.2 42 93-137 110-153 (470)
191 3nks_A Protoporphyrinogen oxid 74.4 3.1 0.0001 40.9 5.0 57 82-139 235-294 (477)
192 3l8k_A Dihydrolipoyl dehydroge 74.2 5 0.00017 39.5 6.6 57 81-138 214-275 (466)
193 3dgh_A TRXR-1, thioredoxin red 72.8 5.7 0.0002 39.3 6.6 56 82-137 228-291 (483)
194 3d1c_A Flavin-containing putat 72.6 6.9 0.00024 36.6 6.9 44 94-137 230-274 (369)
195 1ojt_A Surface protein; redox- 72.0 4 0.00014 40.4 5.3 43 92-137 108-162 (482)
196 1nhp_A NADH peroxidase; oxidor 70.7 4.3 0.00015 39.7 5.1 56 81-138 191-249 (447)
197 4b1b_A TRXR, thioredoxin reduc 70.2 11 0.00038 38.1 8.1 57 82-138 264-322 (542)
198 3ihm_A Styrene monooxygenase A 70.2 1.1 3.8E-05 43.8 0.7 104 12-140 66-172 (430)
199 3h8l_A NADH oxidase; membrane 69.5 4.8 0.00016 38.7 5.1 51 82-136 219-271 (409)
200 3ics_A Coenzyme A-disulfide re 67.9 7.5 0.00026 39.5 6.4 55 82-138 229-285 (588)
201 2zbw_A Thioredoxin reductase; 67.9 12 0.00041 34.4 7.4 57 82-138 192-255 (335)
202 3ab1_A Ferredoxin--NADP reduct 67.7 8.1 0.00028 36.2 6.2 47 92-138 215-266 (360)
203 1v59_A Dihydrolipoamide dehydr 67.6 4.9 0.00017 39.6 4.8 41 92-135 109-157 (478)
204 1lvl_A Dihydrolipoamide dehydr 67.2 3.9 0.00013 40.2 3.9 54 82-137 213-270 (458)
205 3vrd_B FCCB subunit, flavocyto 66.6 3.5 0.00012 39.5 3.4 42 93-134 216-257 (401)
206 3dk9_A Grase, GR, glutathione 66.5 10 0.00034 37.4 6.8 56 82-137 229-295 (478)
207 3itj_A Thioredoxin reductase 1 66.4 8.1 0.00028 35.5 5.8 46 93-138 223-274 (338)
208 1y56_A Hypothetical protein PH 66.2 6 0.00021 39.3 5.1 48 93-140 271-318 (493)
209 3cgb_A Pyridine nucleotide-dis 64.6 13 0.00046 36.5 7.3 55 82-138 228-285 (480)
210 3f8d_A Thioredoxin reductase ( 64.6 14 0.00049 33.4 7.2 48 93-140 204-256 (323)
211 2bs2_A Quinol-fumarate reducta 64.1 15 0.00052 38.1 7.8 56 82-137 159-222 (660)
212 2bc0_A NADH oxidase; flavoprot 63.7 11 0.00036 37.4 6.4 55 82-138 237-294 (490)
213 4gde_A UDP-galactopyranose mut 63.7 6.2 0.00021 38.9 4.7 52 80-133 221-274 (513)
214 2q0l_A TRXR, thioredoxin reduc 63.5 18 0.0006 32.8 7.5 46 93-138 193-244 (311)
215 1vg0_A RAB proteins geranylger 62.5 16 0.00055 37.8 7.5 50 80-129 377-431 (650)
216 3cgb_A Pyridine nucleotide-dis 62.2 7.5 0.00026 38.4 4.9 45 93-137 107-154 (480)
217 4dsg_A UDP-galactopyranose mut 61.0 9.4 0.00032 37.8 5.4 58 80-139 215-274 (484)
218 3r9u_A Thioredoxin reductase; 57.1 22 0.00074 32.1 6.9 46 93-138 197-247 (315)
219 1xhc_A NADH oxidase /nitrite r 56.2 8.4 0.00029 36.6 4.0 53 82-139 184-238 (367)
220 1jnr_A Adenylylsulfate reducta 56.0 14 0.00049 38.1 5.9 56 82-137 152-220 (643)
221 1ebd_A E3BD, dihydrolipoamide 55.7 16 0.00055 35.6 6.0 42 93-137 105-147 (455)
222 3dgz_A Thioredoxin reductase 2 55.7 21 0.00072 35.1 7.0 57 82-138 226-290 (488)
223 2gqw_A Ferredoxin reductase; f 55.6 11 0.00036 36.4 4.6 43 93-137 73-115 (408)
224 2q7v_A Thioredoxin reductase; 52.3 32 0.0011 31.4 7.2 46 93-138 202-252 (325)
225 3g3e_A D-amino-acid oxidase; F 51.5 2.3 7.8E-05 40.0 -0.9 50 76-137 137-188 (351)
226 3kd9_A Coenzyme A disulfide re 50.6 18 0.00062 35.1 5.4 57 82-139 191-248 (449)
227 3klj_A NAD(FAD)-dependent dehy 48.3 19 0.00063 34.5 5.0 41 93-135 76-116 (385)
228 1c0p_A D-amino acid oxidase; a 48.2 4.5 0.00015 38.1 0.5 49 76-137 137-187 (363)
229 1fl2_A Alkyl hydroperoxide red 47.7 34 0.0012 30.8 6.6 47 92-138 193-245 (310)
230 1vdc_A NTR, NADPH dependent th 47.4 33 0.0011 31.3 6.5 46 93-138 209-262 (333)
231 3lzw_A Ferredoxin--NADP reduct 46.9 15 0.00051 33.5 4.0 46 93-138 203-253 (332)
232 3ayj_A Pro-enzyme of L-phenyla 46.1 9.2 0.00031 40.1 2.5 50 81-130 347-409 (721)
233 3cty_A Thioredoxin reductase; 45.0 31 0.0011 31.3 5.9 47 92-138 203-255 (319)
234 1zmd_A Dihydrolipoyl dehydroge 44.2 32 0.0011 33.6 6.1 42 93-137 111-154 (474)
235 2l8d_A Lamin-B receptor; DNA b 43.7 17 0.00058 25.3 2.7 31 92-122 21-51 (66)
236 2bc0_A NADH oxidase; flavoprot 43.6 15 0.0005 36.4 3.5 44 93-137 106-151 (490)
237 3sx6_A Sulfide-quinone reducta 43.0 25 0.00086 34.0 5.1 42 93-137 73-114 (437)
238 4g6h_A Rotenone-insensitive NA 40.8 26 0.00088 34.9 4.8 53 82-134 273-331 (502)
239 3fbs_A Oxidoreductase; structu 38.1 37 0.0013 30.1 5.1 39 93-135 188-226 (297)
240 3h28_A Sulfide-quinone reducta 37.7 29 0.00099 33.4 4.5 38 93-134 214-255 (430)
241 3gwf_A Cyclohexanone monooxyge 35.9 28 0.00096 35.0 4.2 41 93-137 344-386 (540)
242 1m6i_A Programmed cell death p 35.0 27 0.00094 34.4 4.0 43 93-137 104-146 (493)
243 2cdu_A NADPH oxidase; flavoenz 34.9 31 0.001 33.5 4.2 45 93-137 72-119 (452)
244 3r9u_A Thioredoxin reductase; 34.3 1E+02 0.0035 27.4 7.5 57 77-135 58-118 (315)
245 3h28_A Sulfide-quinone reducta 33.4 40 0.0014 32.3 4.8 42 93-137 70-111 (430)
246 4eqs_A Coenzyme A disulfide re 32.6 36 0.0012 32.9 4.3 41 93-137 202-242 (437)
247 3ef6_A Toluene 1,2-dioxygenase 32.5 45 0.0015 31.8 5.0 41 93-135 71-111 (410)
248 2dig_A Lamin-B receptor; tudor 32.1 27 0.00092 24.3 2.2 30 93-122 25-54 (68)
249 2a87_A TRXR, TR, thioredoxin r 31.7 41 0.0014 30.8 4.3 45 93-137 205-254 (335)
250 1nhp_A NADH peroxidase; oxidor 31.6 46 0.0016 32.1 4.9 44 93-136 70-116 (447)
251 2k9x_A Tburm1, uncharacterized 29.7 18 0.00062 28.1 1.2 26 348-376 70-95 (110)
252 1wgk_A Riken cDNA 2900073H19 p 28.8 17 0.00056 28.5 0.9 26 348-376 76-101 (114)
253 4fk1_A Putative thioredoxin re 28.8 1.2E+02 0.004 27.2 6.9 58 78-135 57-117 (304)
254 1ps9_A 2,4-dienoyl-COA reducta 28.3 84 0.0029 32.3 6.4 43 93-138 587-631 (671)
255 3hyw_A Sulfide-quinone reducta 27.9 57 0.0019 31.3 4.8 40 93-135 70-109 (430)
256 3qfa_A Thioredoxin reductase 1 27.0 1.3E+02 0.0044 29.7 7.4 57 81-137 250-317 (519)
257 3hyw_A Sulfide-quinone reducta 26.1 1.1E+02 0.0039 29.1 6.6 40 93-134 214-255 (430)
258 2x8g_A Thioredoxin glutathione 25.1 1.6E+02 0.0056 29.4 7.8 57 82-138 327-398 (598)
259 3lxd_A FAD-dependent pyridine 22.7 76 0.0026 30.1 4.6 41 93-135 79-119 (415)
260 3sx6_A Sulfide-quinone reducta 22.6 97 0.0033 29.7 5.3 39 93-133 222-267 (437)
261 3uox_A Otemo; baeyer-villiger 22.0 82 0.0028 31.5 4.8 39 93-136 352-392 (545)
262 2qae_A Lipoamide, dihydrolipoy 21.3 1.1E+02 0.0037 29.6 5.5 42 93-137 107-150 (468)
263 3k30_A Histamine dehydrogenase 21.2 1.3E+02 0.0046 30.8 6.4 44 93-138 581-627 (690)
264 3h8l_A NADH oxidase; membrane 21.2 81 0.0028 29.8 4.4 42 93-137 70-115 (409)
265 1hyu_A AHPF, alkyl hydroperoxi 20.6 1.4E+02 0.0046 29.6 6.1 46 92-137 404-455 (521)
266 1xhc_A NADH oxidase /nitrite r 20.2 88 0.003 29.3 4.4 40 93-135 74-113 (367)
No 1
>4h87_A Kanadaptin; FHA domain of PF00498, mRNA processing, nucleus, structural joint center for structural genomics, JCSG, protein structu initiative; HET: SO4; 1.55A {Homo sapiens}
Probab=99.79 E-value=3.9e-19 Score=148.27 Aligned_cols=99 Identities=25% Similarity=0.418 Sum_probs=78.0
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEE-----------ECCEEEEEE
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRY-----------KDGAFYLID 341 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~-----------~~~~~~i~D 341 (412)
..|.|....+.. ....+.|.. +..++|||.+.+ |++|+++.|||+||+|.+ .++.|+|+|
T Consensus 19 ~~~~L~v~k~g~-~~~~~~L~~---~~~~~IGR~~~~-----di~l~~~~VSr~HA~I~~r~~~~~~~~~~~~~~~~l~D 89 (130)
T 4h87_A 19 APYSLETLKGGT-ILGTRSLKG---TSYCLFGRLSGC-----DVCLEHPSVSRYHAVLQHRASGPDGECDSNGPGFYLYD 89 (130)
T ss_dssp SCCEEEEEETTE-EEEEEECTT---CSEEEEESSTTS-----SEECCCTTSCSSCEEEEEBCCCCCC------CCEEEEE
T ss_pred CCEEEEEEECCe-eeeeEEeCC---CceEEEcCCcCC-----CEEeCCCCcchhcEEEEEecccCccceeccCCcceEee
Confidence 467887766543 224444433 556899998865 699999999999999965 456799999
Q ss_pred cCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEE
Q 015167 342 LRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQV 386 (412)
Q Consensus 342 l~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~ 386 (412)
|+|+||||||+. +|.++.+++|++||+|+||.... .|.+
T Consensus 90 l~StNGT~vNg~-----ri~~~~~~~L~~GD~I~~G~str-~yvl 128 (130)
T 4h87_A 90 LGSTHGTFLNKT-----RIPPRTYCRVHVGHVVRFGGSTR-LFIL 128 (130)
T ss_dssp CSCSSCEEETTE-----ECCTTCCEECCTTCEEEETTCSE-EEEE
T ss_pred CCCCCceEECCE-----ECCCCceeECCCCCEEEECCceE-EEEE
Confidence 999999999999 99999999999999999998643 3554
No 2
>3va4_A Mediator of DNA damage checkpoint protein 1; cell cycle, FHA domain, DNA-damage, CHK2 and MDC1 dimerizati; HET: TPO; 1.54A {Mus musculus} PDB: 3va1_A* 3umz_A 3unm_A 3unn_A* 3uot_A* 3un0_B
Probab=99.77 E-value=1.2e-18 Score=145.60 Aligned_cols=92 Identities=25% Similarity=0.296 Sum_probs=76.6
Q ss_pred cccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--CCEEEEEEcCCccceeeeCcCCceeecCCCC
Q 015167 287 SQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--DGAFYLIDLRSEHGTYITDNEGRRYRVSPNF 364 (412)
Q Consensus 287 ~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~ 364 (412)
.+.+.|.. ..++|||.+++ +++++++.|||+||+|.++ ++.|+|+|++|+||||||+. +.+|.++.
T Consensus 37 g~~~~L~~----~~~~IGR~~~~-----di~l~d~~VSr~HA~i~~~~~~~~~~l~Dl~S~NGT~vNg~---~i~l~~~~ 104 (132)
T 3va4_A 37 ERDFPLYL----GKNVVGRSPDC-----SVALPFPSISKQHAVIEISAWNKAPILQDCGSLNGTQIVKP---PRVLPPGV 104 (132)
T ss_dssp CEEEEECS----EEEEEESSTTS-----SEECCCTTSCTTCEEEEECSTTSCCEEEECSCSSCEEETTT---TEEECTTC
T ss_pred ceEEEECC----CCEEEccCCCC-----CEEeCCCCcChhHEEEEEEcCCCEEEEEECCCCCCeEECCE---EcccCCCC
Confidence 45666654 56899999875 6999999999999999997 58899999999999999998 12377889
Q ss_pred cEEeCCCCEEEECCCCceEEEEEEeccCC
Q 015167 365 PARFRPSNSIQFGSDKKATFQVKVIRSTP 393 (412)
Q Consensus 365 ~~~l~~gd~i~~G~~~~~~f~~~~~~~~~ 393 (412)
+++|++||+|.||+. .|+|.....||
T Consensus 105 ~~~L~~GD~I~lG~~---~l~f~~~~~p~ 130 (132)
T 3va4_A 105 SHRLRDQELILFADF---PCQYHRLDVPP 130 (132)
T ss_dssp CEECCTTCEEEETTE---EEEEEECCCCC
T ss_pred EEECCCCCEEEECCE---EEEEEECCCCC
Confidence 999999999999987 57777765443
No 3
>1uht_A Expressed protein; FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif, structural genomics; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.77 E-value=2.2e-18 Score=141.79 Aligned_cols=105 Identities=21% Similarity=0.273 Sum_probs=82.3
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCC-CCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeee
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSE-SQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~-~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 351 (412)
..|.|....+... .+.+.+.. ...++|||. +. |+++|++..|||+||+|.++++.|+|+|++|+||||||
T Consensus 11 p~l~L~v~~g~~~-g~~~~l~~---~~~~~iGR~~~~-----~di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGT~vn 81 (118)
T 1uht_A 11 PSLRLVFVKGPRE-GDALDYKP---GSTIRVGRIVRG-----NEIAIKDAGISTKHLRIESDSGNWVIQDLGSSNGTLLN 81 (118)
T ss_dssp CEEEEEESSSTTT-TCBCCBCT---TCCEEEESSSTT-----CSEECCSSSSCTTCEEEEECSSSEEEECCCCSSCCEES
T ss_pred CeEEEEEEeCCCC-CcEEEECC---CCEEEEcCCCCC-----CCEEeCCCCCchHHeEEEEECCEEEEEECCCCCCeEEC
Confidence 3566666554322 24444433 467999999 44 56999999999999999999999999999999999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEeccCCC
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVIRSTPK 394 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~~~~~~ 394 (412)
+. ++.++++++|++||+|.||.. .|.+......|.
T Consensus 82 g~-----~l~~~~~~~L~~gd~i~lG~~---~~~~~~~~~~p~ 116 (118)
T 1uht_A 82 SN-----ALDPETSVNLGDGDVIKLGEY---TSILVNFVSGPS 116 (118)
T ss_dssp SS-----BCCTTCEEECCTTEEEEETTT---EEEEEEEECSSC
T ss_pred CE-----ECCCCCeEEcCCCCEEEECCe---EEEEEEEecCCC
Confidence 99 898888999999999999998 344444444444
No 4
>3gqs_A Adenylate cyclase-like protein; FHA domain, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.20A {Chlamydia trachomatis}
Probab=99.77 E-value=2.4e-18 Score=138.81 Aligned_cols=100 Identities=20% Similarity=0.397 Sum_probs=80.2
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE-CCEEEEEEcCCccceee
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK-DGAFYLIDLRSEHGTYI 350 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~-~~~~~i~Dl~S~nGt~v 350 (412)
+..|.|....+.. .++.+.+.. ...++|||.+.. |+++++++.|||+||+|.++ ++.|+|+|++|+|||||
T Consensus 2 ~~~~~L~v~~G~~-~g~~~~l~~---~~~~~iGR~~~~----~di~l~d~~vSr~Ha~i~~~~~~~~~l~Dl~S~nGt~v 73 (106)
T 3gqs_A 2 PSRFLLKVLAGAN-IGAEFHLDS---GKTYIVGSDPQV----ADIVLSDMSISRQHAKIIIGNDNSVLIEDLGSKNGVIV 73 (106)
T ss_dssp -CEEEEEECC-CC-TTCEEEECT---TCEEEEESCTTT----CSEECCCTTSCSSCEEEEECTTSCEEEEECSCSSCCEE
T ss_pred CceEEEEEEeCCC-CcEEEEECC---CCEEEEeECCCc----CCEEeCCCCcchhhcEEEECCCCcEEEEECcCCCCeEE
Confidence 3568888776544 245666654 567999999832 46999999999999999998 68899999999999999
Q ss_pred eCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 351 TDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 351 n~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|+. ++.+ +++|++||+|+||.. .|+|...
T Consensus 74 ng~-----~i~~--~~~L~~Gd~i~~G~~---~~~~~~~ 102 (106)
T 3gqs_A 74 EGR-----KIEH--QSTLSANQVVALGTT---LFLLVDY 102 (106)
T ss_dssp TTE-----ECSS--EEECCTTCCEEETTE---EEEEEEE
T ss_pred CCE-----ECCC--CeECCCCCEEEECCE---EEEEEcc
Confidence 998 7754 689999999999986 5666654
No 5
>2pie_A E3 ubiquitin-protein ligase RNF8; FHA domain, complex, ligase, signaling protein; HET: TPO; 1.35A {Homo sapiens} SCOP: b.26.1.2
Probab=99.75 E-value=8.1e-18 Score=142.17 Aligned_cols=102 Identities=19% Similarity=0.323 Sum_probs=84.5
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCc----ccccceEEEE-ECCEEEEEEcCCcc
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQ----VSKMHAHIRY-KDGAFYLIDLRSEH 346 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~----vSr~Ha~i~~-~~~~~~i~Dl~S~n 346 (412)
...|.|...+... ..+.+.. ...++|||.+.+ +++|+++. |||.||+|.+ .++.|+|+|++|+|
T Consensus 7 ~~~w~l~~~G~~~---~~~~l~~---~~~~~IGR~~~~-----di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~N 75 (138)
T 2pie_A 7 GRSWCLRRVGMSA---GWLLLED---GCEVTVGRGFGV-----TYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLN 75 (138)
T ss_dssp CEEEEEEETTCSS---CBEEECT---TCCEEEESSSSS-----SEECCCSSCTTSSCSSCEEEEECTTSCEEEEECSCSS
T ss_pred CccEEEEEeCCCC---CEEEecC---CCeEEECCCCCC-----CEEeCCCCcCCCCChhHeEEEEcCCCcEEEEECCCCC
Confidence 3469988876653 3555643 578999999865 69999988 9999999999 67889999999999
Q ss_pred ceeeeCcCCceeecCCCCcEEeCCCCEEEECCC----CceEEEEEEe
Q 015167 347 GTYITDNEGRRYRVSPNFPARFRPSNSIQFGSD----KKATFQVKVI 389 (412)
Q Consensus 347 Gt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~----~~~~f~~~~~ 389 (412)
|||||+. ++.++.+++|++||+|.||.. ..+.|.+...
T Consensus 76 GT~vNg~-----~l~~~~~~~L~~GD~I~lG~~~~~~~~~~f~~~~~ 117 (138)
T 2pie_A 76 GVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 117 (138)
T ss_dssp CEEETTE-----ECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEE
T ss_pred CeEECCE-----EcCCCCcEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999998 999889999999999999983 3446777665
No 6
>3els_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 1.80A {Saccharomyces cerevisiae}
Probab=99.73 E-value=8.4e-18 Score=144.67 Aligned_cols=110 Identities=19% Similarity=0.292 Sum_probs=85.2
Q ss_pred CCceEEEEcCCCCC---ccccEEeeccCCCCCEEecCCCC----------CCCCceeEEeCCCcccccceEEEEECCE--
Q 015167 272 NGEWLLVPSGSETV---VSQPIYLSRSDENEPYLIGSESQ----------EDFPRTSIVIPSAQVSKMHAHIRYKDGA-- 336 (412)
Q Consensus 272 ~~~w~l~~~~~~~~---~~~~i~l~~~~~~~~~~iGR~~~----------~~~~~~~~~i~~~~vSr~Ha~i~~~~~~-- 336 (412)
...|.|+...+... ..+.+.|.. ...++|||.+. ++...||++|+++.|||+||+|.+.++.
T Consensus 29 ~~~~~l~v~k~g~~~~~~~~~~~L~~---~~~~~IGR~~~~~~~~~~~~~n~~~~~Di~l~~~~VSr~HA~I~~~~~~~~ 105 (158)
T 3els_A 29 RTMYELVIYRKNDKDKGPWKRYDLNG---RSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 105 (158)
T ss_dssp SCCEEEEEEEGGGGGGCCSEEEECSS---CSEEEEEECCCC---------CCCCCCSEEECCTTSCSSCEEEEEEEETTE
T ss_pred CCceEEEEEeCCccCcccceEEEecC---CCceEeccccccccccccccccccccCCEEcCCCCCCcccEEEEEEccCCe
Confidence 45688887755421 224555544 67899999863 3334589999999999999999988765
Q ss_pred --EEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECCCC-ceEEEEEEe
Q 015167 337 --FYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSDK-KATFQVKVI 389 (412)
Q Consensus 337 --~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~-~~~f~~~~~ 389 (412)
|+|+|++|+||||||+. ++.++.+++|++||+|.||... ...|++...
T Consensus 106 ~~~~l~Dl~StNGT~VNg~-----ri~~~~~~~L~~GD~I~~G~s~~~~~~elvF~ 156 (158)
T 3els_A 106 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFEEDNDYELIFM 156 (158)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCTTCCEECCTTEEEESSSCGGGCCEEEEEE
T ss_pred eEEEEEeCCCCCccEECCE-----EcCCCceEEcCCCCEEEECCCCCCCCEEEEEE
Confidence 99999999999999999 9998889999999999999753 123555443
No 7
>2csw_A Ubiquitin ligase protein RNF8; 11-stranded beta sandwich, ring finger protein 8, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.26.1.2
Probab=99.71 E-value=1.1e-17 Score=142.54 Aligned_cols=102 Identities=19% Similarity=0.325 Sum_probs=80.7
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCc----ccccceEEEE-ECCEEEEEEcCCcc
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQ----VSKMHAHIRY-KDGAFYLIDLRSEH 346 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~----vSr~Ha~i~~-~~~~~~i~Dl~S~n 346 (412)
...|.|...+.. ...+.+.. ...++|||.+++ +++|+++. |||+||+|.+ .++.|+|+|++|+|
T Consensus 15 ~~~w~L~~~G~~---~~~~~l~~---~~~~~IGR~~~~-----di~l~~~~~~~~VSr~Ha~i~~~~~g~~~l~Dl~S~N 83 (145)
T 2csw_A 15 GRSWCLRRVGMS---AGWLLLED---GCEVTVGRGFGV-----TYQLVSKICPLMISRNHCVLKQNPEGQWTIMDNKSLN 83 (145)
T ss_dssp SEEEEECCTTCS---CCBEECCT---TCCEEEESSTTS-----SEECCCSSCGGGSCTTCEEEEECTTSCEEEEBSSCSS
T ss_pred CccEEEEEeCCC---CCeEEeCC---CCcEEECCCCCC-----CEEECCCCcCCCCChhHeEEEEcCCCeEEEEECCCCC
Confidence 457888833322 23444533 578999999865 69999987 9999999999 47889999999999
Q ss_pred ceeeeCcCCceeecCCCCcEEeCCCCEEEECCC----CceEEEEEEe
Q 015167 347 GTYITDNEGRRYRVSPNFPARFRPSNSIQFGSD----KKATFQVKVI 389 (412)
Q Consensus 347 Gt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~----~~~~f~~~~~ 389 (412)
|||||+. ++.++++++|++||+|.||.. ..+.|.+...
T Consensus 84 GT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~g~~~~f~~~~~ 125 (145)
T 2csw_A 84 GVWLNRA-----RLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVT 125 (145)
T ss_dssp CEEESSC-----BCCBTCCEECCSSCCEEESCCCTTCSSCSCCCCEE
T ss_pred CeEECCE-----ECCCCccEECCCCCEEEECCCCCCCceEEEEEEec
Confidence 9999999 898888999999999999983 2344555444
No 8
>2xt9_B Putative signal transduction protein GARA; lyase-signaling protein complex, KDH, KGD; HET: TPP; 2.20A {Mycobacterium smegmatis}
Probab=99.71 E-value=4.8e-17 Score=133.08 Aligned_cols=97 Identities=24% Similarity=0.368 Sum_probs=76.0
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeee
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 351 (412)
+..|.|....+.. ....+.+.. ..++|||.+.+ +++|++..|||+||+|.++++.|+|+|++|+||||||
T Consensus 9 ~~~~~L~v~~g~~-~g~~~~l~~----~~~~IGR~~~~-----di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vn 78 (115)
T 2xt9_B 9 SGSALLVVKRGPN-AGSRFLLDQ----PTTSAGRHPDS-----DIFLDDVTVSRRHAEFRLEGGEFQVVDVGSLNGTYVN 78 (115)
T ss_dssp CSCEEEEEEESTT-TTCEEEECS----SEEEEESSTTS-----SEECCSTTSCSSCEEEEEETTEEEEEECSCSSCEEET
T ss_pred CCcEEEEEEeCCC-CCeEEEECC----CCEEECCCCCC-----CEEeCCcccChhheEEEEECCEEEEEECCCCCCeEEC
Confidence 3445555443322 234555543 67999999865 6999999999999999999999999999999999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
+. ++. +++|++||+|.||.. .|+|...
T Consensus 79 g~-----~i~---~~~L~~gd~i~iG~~---~l~~~~~ 105 (115)
T 2xt9_B 79 RE-----PVD---SAVLANGDEVQIGKF---RLVFLTG 105 (115)
T ss_dssp TE-----ECS---EEEECTTCEEEETTE---EEEEEC-
T ss_pred CE-----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 98 775 689999999999985 4555543
No 9
>2jpe_A Nuclear inhibitor of protein phosphatase 1; FHA domain, NIPP1, mRNA splicing, transcription; NMR {Mus musculus}
Probab=99.71 E-value=2.6e-18 Score=145.61 Aligned_cols=95 Identities=23% Similarity=0.457 Sum_probs=77.6
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEEC--CEEEEEEcCCccceee
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKD--GAFYLIDLRSEHGTYI 350 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~--~~~~i~Dl~S~nGt~v 350 (412)
..|.|....+.. ....+.+.. ...++|||.++. |+++|+++.|||+||+|.+++ +.|+|+|++|+|||||
T Consensus 33 ~~~~L~v~~g~~-~g~~~~l~~---~~~~~IGR~~~~----~di~l~d~~VSr~Ha~i~~~~~~~~~~l~Dl~S~NGT~v 104 (140)
T 2jpe_A 33 PGLHLDVVKGDK-LIEKLIIDE---KKYYLFGRNPDL----CDFTIDHQSCSRVHAALVYHKHLKRVFLIDLNSTHGTFL 104 (140)
T ss_dssp SSCBEEEESSSS-EEEEECCSS---CSBCCBSSCTTT----SSSCCCCSSSCTTSBEEEEBSSSCCEEEECCSCSSCEES
T ss_pred cCEEEEEEcCCC-cceEEEeCC---CCeEEecCCCcc----CCEEeCCCCcChhheEEEEECCCCcEEEEECCCCCCeEE
Confidence 457776655432 223444433 356999999872 469999999999999999997 8999999999999999
Q ss_pred eCcCCceeecCCCCcEEeCCCCEEEECCCC
Q 015167 351 TDNEGRRYRVSPNFPARFRPSNSIQFGSDK 380 (412)
Q Consensus 351 n~~~~~~~~l~~~~~~~l~~gd~i~~G~~~ 380 (412)
|+. ++.++.+++|++||+|.||...
T Consensus 105 Ng~-----~l~~~~~~~L~~gd~i~~G~~~ 129 (140)
T 2jpe_A 105 GHI-----RLEPHKPQQIPIDSTVSFGAST 129 (140)
T ss_dssp SSC-----EECSSSCCEECTTCCBBCSSCC
T ss_pred CCE-----ECCCCccEECCCCCEEEECCce
Confidence 999 9988889999999999999974
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.71 E-value=1.5e-16 Score=157.45 Aligned_cols=269 Identities=17% Similarity=0.130 Sum_probs=145.0
Q ss_pred ccccceeeCHHHHHHHHHcccChHHHHHhc---ccccccceeEEEECCCCcEEEEEeC-CCcc-cccCCCeEEEEeHHHH
Q 015167 9 LYRGPIQIQSNALAALEAIDLDVAEEVMRA---GCVTGDRINGLVDGISGSWYIKFDT-FTPA-AEKGLPVTRVISRMTL 83 (412)
Q Consensus 9 ~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~---~~~~~~~~~~~~~~~~g~~l~~~~~-~~~~-~~~g~~~~~~i~r~~L 83 (412)
..|+||.|+|+++++|+++ |+.+.+... ........ .+.+ ..+..+..... .... ...+.+ .+.|+|.+|
T Consensus 40 ~~G~~i~l~~~~~~~L~~l--g~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~i~R~~L 114 (412)
T 4hb9_A 40 LPGYGIHINSFGKQALQEC--LPAENWLAFEEASRYIGGQS-RFYN-ERMRLLAVHGGISPMAGKIISEQ-RLSISRTEL 114 (412)
T ss_dssp CCCCEEEECHHHHHHHHHH--SCHHHHHHHHHHCEEECCCC-EEEC-TTSCEEEC--------------C-EEEEEHHHH
T ss_pred CCceEEeeCHHHHHHHHHc--CChHHHHHhhhhhcccCcce-eEec-CCcceecccCCcccccccccccc-ceEeeHHHH
Confidence 3488999999999999999 887766532 21111122 2343 23333221111 1001 111333 368999999
Q ss_pred HHHHHhhcCCCEEEcCCeEEEEEEeCC-eEEEEEccCcEEEeCEEEEecCcCchhHHHHhhhhccccc---cccCccccc
Q 015167 84 QQILAHAVGNDIILNDSNVIDFMDHGD-KVSVMLENGQCYAGDVLVGADGIWSKMNLLMSWLLCLSSL---KLTTRIVHA 159 (412)
Q Consensus 84 ~~~L~~~l~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~~~adllVgADG~~S~vr~~~~~~~~~~d~---~~~~~~~~~ 159 (412)
+++|.+.++ ..|+|+++|+++++.++ +++|+|+||++++|||||||||++|.||..+.-.....+. .+.+.....
T Consensus 115 ~~~L~~~~~-~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~ 193 (412)
T 4hb9_A 115 KEILNKGLA-NTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLT 193 (412)
T ss_dssp HHHHHTTCT-TTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECC
T ss_pred HHHHHhhcc-ceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecc
Confidence 999999995 45899999999998665 6999999999999999999999999995431100000000 001111111
Q ss_pred hhhccccccccceeeeehhhhHHHHHHhhhccce-eecCCccccceeeeecCCCCcccchheecccCCeEEEEEEeeeCC
Q 015167 160 SKLCSYESARRLRVAIIHRLARSAAMMASTYNGY-LSVGLGPLSFLTKFWIPHPGRVVRRFFIDLAMPLMLNWVLGGNSS 238 (412)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 238 (412)
.......+.. +....... +....... ++.....+..... ..........++|.......
T Consensus 194 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 253 (412)
T 4hb9_A 194 PALTALLPQN----------------FRDGTPNSIVPKSPDWL-FISMWRAPVNIHV---EASLAEIDNFIVWVYVAATD 253 (412)
T ss_dssp HHHHHHSCGG----------------GTSSCCEEECCSSSEEE-EEEEEEEESCTTS---CGGGCCEEEEEEEEEEEEGG
T ss_pred hhhhcchhhh----------------hccCCcceEeecCCCcc-eeeeeecCCceeE---EEeccCCCceEEEEEecccc
Confidence 1111111110 00000000 00000000 0111111110000 00001112225676655555
Q ss_pred CCCC---CCCccchhhHHHHHhhcccCCchhhhhccCC-c---eEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCC
Q 015167 239 KLEG---RSPCCRLSDKASDQLRTWLRDNDALERAMNG-E---WLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDF 311 (412)
Q Consensus 239 ~~~~---~~~~~~~~~~~~~~~~~W~p~~~~l~~a~~~-~---w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~ 311 (412)
..++ .++.+.+.+.+.+.+.+|+|.+..++..++. . |.+..... +.+|..++.++||.+.+..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~---------~~~~~~grv~LiGDAAH~~~ 324 (412)
T 4hb9_A 254 SLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPH---------LLPWKSSTVTLLGDAIHNMT 324 (412)
T ss_dssp GSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCC---------CCCCCCCSEEECTHHHHCSS
T ss_pred cccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccc---------cccccccCEEEEEcccccCC
Confidence 5442 4566778888999999999998888876642 2 33332221 23345578899999998877
Q ss_pred C
Q 015167 312 P 312 (412)
Q Consensus 312 ~ 312 (412)
|
T Consensus 325 P 325 (412)
T 4hb9_A 325 P 325 (412)
T ss_dssp C
T ss_pred C
Confidence 7
No 11
>1lgp_A Cell cycle checkpoint protein CHFR; FHA, tungstate, domain swapping; 2.00A {Homo sapiens} SCOP: b.26.1.2 PDB: 1lgq_A
Probab=99.70 E-value=3.6e-17 Score=134.15 Aligned_cols=87 Identities=22% Similarity=0.301 Sum_probs=73.8
Q ss_pred ccEEeeccCCCCCEEecCCCCCCCCceeEEeCCC-cccccceEEEEE--CCEEEEEEcCCccceeeeCcCCceeecCCCC
Q 015167 288 QPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSA-QVSKMHAHIRYK--DGAFYLIDLRSEHGTYITDNEGRRYRVSPNF 364 (412)
Q Consensus 288 ~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~-~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~ 364 (412)
..+.+.. ..++|||.+.+ +++|++. .|||.||+|.++ ++.|+|+| +|+||||||+. ++.+++
T Consensus 17 ~~~~l~~----~~~~iGR~~~~-----di~l~~~~~vSr~Ha~i~~~~~~~~~~l~D-~S~NGt~vng~-----~l~~~~ 81 (116)
T 1lgp_A 17 PHVLLRK----REWTIGRRRGC-----DLSFPSNKLVSGDHCRIVVDEKSGQVTLED-TSTSGTVINKL-----KVVKKQ 81 (116)
T ss_dssp CCEEECS----SEEEEESSTTS-----SEECTTCTTSCTTCEEEEECTTTCCEEEEE-CSSSCCCCCCC-----CCCCSS
T ss_pred cEEEECC----CCEEECCCCCC-----CEEeCCCCCCChhHeEEEEECCCCeEEEEE-CCcCCcEECCE-----EcCCCC
Confidence 4555543 77999999865 6999865 999999999997 78899999 99999999999 898888
Q ss_pred cEEeCCCCEEEECCCC-----ceEEEEEEe
Q 015167 365 PARFRPSNSIQFGSDK-----KATFQVKVI 389 (412)
Q Consensus 365 ~~~l~~gd~i~~G~~~-----~~~f~~~~~ 389 (412)
+++|++||+|.||... .+.|.|...
T Consensus 82 ~~~L~~GD~i~~G~~~~~~~~~~~f~f~~~ 111 (116)
T 1lgp_A 82 TCPLQTGDVIYLVYRKNEPEHNVAYLYESL 111 (116)
T ss_dssp CCCCCTTCEEEEECCSSCGGGCEEEECCCS
T ss_pred cEECCCCCEEEEeccCCCCCceEEEEEEcc
Confidence 9999999999999853 456777655
No 12
>2kb3_A Oxoglutarate dehydrogenase inhibitor; forkhead-associated domain, kinase substrate, GARA, FHA, cytoplasm, phosphoprotein; HET: TPO; NMR {Corynebacterium glutamicum} PDB: 2kb4_A
Probab=99.70 E-value=7.9e-17 Score=136.47 Aligned_cols=96 Identities=23% Similarity=0.375 Sum_probs=77.4
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeee
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 351 (412)
...|.|....+... ...+.+.. ..++|||.+++ +++|++..|||+||+|.++++.|+|+|++|+||||||
T Consensus 44 ~~~~~L~v~~G~~~-g~~~~L~~----~~~~IGR~~~~-----di~l~d~~VSr~Ha~I~~~~~~~~l~DlgS~NGT~VN 113 (143)
T 2kb3_A 44 AGSALLVVKRGPNA-GARFLLDQ----PTTTAGRHPES-----DIFLDDVTVSRRHAEFRINEGEFEVVDVGSLNGTYVN 113 (143)
T ss_dssp SSCEEEEEEESTTT-TCEEEECS----SEEEESSCTTC-----SBCCCCSSCCSSSEEEEEETTEEEEEESCCSSCCEET
T ss_pred CccEEEEEEeCCCC-CeEEEeCC----CCeeccCCCCC-----CEEeCCCCcChhhEEEEEECCEEEEEECCCcCCeEEC
Confidence 45677766544322 35555643 67999999865 6999999999999999999999999999999999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEE
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKV 388 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~ 388 (412)
+. ++. ++.|++||+|+||.. .|+|..
T Consensus 114 g~-----~i~---~~~L~~GD~I~iG~~---~l~f~~ 139 (143)
T 2kb3_A 114 RE-----PRN---AQVMQTGDEIQIGKF---RLVFLA 139 (143)
T ss_dssp TE-----ECS---EEECCTTEEEEETTE---EEEEEE
T ss_pred CE-----Ecc---eEECCCCCEEEECCE---EEEEEe
Confidence 98 775 689999999999985 455543
No 13
>1gxc_A CHK2, CDS1, serine/threonine-protein kinase CHK2; phosphoprotein-binding domain, checkpoint kinase, transferase; HET: TPO; 2.7A {Homo sapiens} SCOP: b.26.1.2
Probab=99.70 E-value=1.1e-16 Score=137.07 Aligned_cols=101 Identities=16% Similarity=0.208 Sum_probs=80.6
Q ss_pred CCceEE-EEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCc---------ccccceEEEEECC-----E
Q 015167 272 NGEWLL-VPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQ---------VSKMHAHIRYKDG-----A 336 (412)
Q Consensus 272 ~~~w~l-~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~---------vSr~Ha~i~~~~~-----~ 336 (412)
+..|.. +...... ..+.|.. ..++|||.+.+ +++|++.. |||+||+|.+.++ .
T Consensus 27 ~~~w~~L~~~~~~~---~~i~L~~----~~~~IGR~~~~-----di~l~d~~~~~~~~~~~VSr~Ha~I~~~~~~~~~~~ 94 (149)
T 1gxc_A 27 PAPWARLWALQDGF---ANLECVN----DNYWFGRDKSC-----EYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYI 94 (149)
T ss_dssp --CCEEEEECSTTC---CCEEECS----SEEEEESSTTC-----SEECCCGGGGGSSGGGGSCTTCEEEEEEECTTSSEE
T ss_pred CCeeEEEEEcCCCC---ceEEECC----CCEEecCCCCC-----CEEECCccccccccCCcCchhheEEEEECCCCceeE
Confidence 346754 4444321 3455643 67999999854 69999884 9999999999887 8
Q ss_pred EEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEec
Q 015167 337 FYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVIR 390 (412)
Q Consensus 337 ~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~~ 390 (412)
|+|+|+ |+||||||+. ++.++.+++|++||+|.||......|.|..+.
T Consensus 95 ~~i~D~-StNGT~VNg~-----~i~~~~~~~L~~GD~I~lG~~~~~~f~f~d~~ 142 (149)
T 1gxc_A 95 AYIEDH-SGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDLT 142 (149)
T ss_dssp EEEEEC-CSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEETT
T ss_pred EEEEEC-CCCCeEECCE-----ECCCCCeEECCCCCEEEECCCCCeEEEEEECC
Confidence 999996 9999999999 99999999999999999999765678887763
No 14
>3po8_A RV0020C protein, putative uncharacterized protein TB39.8; FHA domain, synthetic peptide, peptide binding protein; 1.50A {Mycobacterium tuberculosis} SCOP: b.26.1.0 PDB: 3poa_A* 2lc1_A
Probab=99.70 E-value=4.8e-17 Score=129.72 Aligned_cols=81 Identities=23% Similarity=0.406 Sum_probs=69.0
Q ss_pred ccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeeeCcCCceeecCCCCcEE
Q 015167 288 QPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPAR 367 (412)
Q Consensus 288 ~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 367 (412)
+.+.+.. ..++|||.+++ ++.++++.|||.||+|.++++.|+|+|++|+||||||+. ++. +++
T Consensus 16 ~~~~l~~----~~~~IGR~~~~-----di~l~d~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~---~~~ 78 (100)
T 3po8_A 16 RTYQLRE----GSNIIGRGQDA-----QFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EWQ 78 (100)
T ss_dssp CEEECCS----EEEEEESSTTC-----SEECCCTTSCSSCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EEE
T ss_pred cEEEECC----CCEEEeCCCCC-----CEECCCCCcChhhCEEEEeCCEEEEEECCCCCCEEECCE-----ECc---eEE
Confidence 4555543 56999998865 699999999999999999999999999999999999998 764 689
Q ss_pred eCCCCEEEECCCCceEEEEEE
Q 015167 368 FRPSNSIQFGSDKKATFQVKV 388 (412)
Q Consensus 368 l~~gd~i~~G~~~~~~f~~~~ 388 (412)
|++||+|.||.. .|+|+.
T Consensus 79 L~~gd~i~iG~~---~~~~~~ 96 (100)
T 3po8_A 79 LADGDVIRLGHS---EIIVRM 96 (100)
T ss_dssp CCTTCEEEETTE---EEEEEE
T ss_pred CCCCCEEEECCE---EEEEEE
Confidence 999999999986 344444
No 15
>1dmz_A Protein (protein kinase SPK1); beta-sandwich, antiparallel beta-sheets, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1fhq_A 1fhr_A* 1j4k_A* 1j4l_A* 1k2m_A* 1k2n_A*
Probab=99.69 E-value=1.1e-16 Score=138.11 Aligned_cols=100 Identities=16% Similarity=0.313 Sum_probs=79.9
Q ss_pred EEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEEC---------------CEEEEEE
Q 015167 277 LVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKD---------------GAFYLID 341 (412)
Q Consensus 277 l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~---------------~~~~i~D 341 (412)
|.|..... ..+.+.+.. ...+++|||.+.+ +++|+++.|||.||+|.+++ +.|+|+|
T Consensus 8 L~p~~~~~-~~~~i~L~~--~~~~~~IGR~~~~-----di~l~d~~VSr~Ha~I~~~~~~~g~~~~~~~~~~~~~~~l~D 79 (158)
T 1dmz_A 8 LKPLPDSI-IQESLEIQQ--GVNPFFIGRSEDC-----NCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCH 79 (158)
T ss_dssp EEECTTSS-CCCCEEETT--SCSCEEEESSTTS-----SEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEE
T ss_pred EEeCCCCc-cceEEEEcC--CCceEEECCCCCC-----CEEeCCCCcChHHeEEEEecCccccccccccccccccEEEEE
Confidence 55555432 245666653 2356999999864 69999999999999999877 7899999
Q ss_pred cCCccceeeeCcCCceeecCCCCcEEeCCCCEEEE-----CCCCceEEEEEEecc
Q 015167 342 LRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQF-----GSDKKATFQVKVIRS 391 (412)
Q Consensus 342 l~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----G~~~~~~f~~~~~~~ 391 (412)
+ |+||||||+. ++.++.+++|++||+|.| |... ..|++.....
T Consensus 80 l-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~~-l~f~~~~~~~ 127 (158)
T 1dmz_A 80 T-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKFV-IGFKVEINDT 127 (158)
T ss_dssp C-STTCCEETTE-----ECCSSEEEECCSSCCEESCCCTTTTCC-CCEEEECSCC
T ss_pred C-CcCCeEECCE-----EcCCCceEEcCCCCEEEEeecCCCCEE-EEEEEEeCCC
Confidence 9 9999999999 999888999999999999 8763 4577665543
No 16
>3elv_A PRE-mRNA leakage protein 1; intrinsically unstructured domain, forkhead-associated domai domain, PRE-mRNA retention and splicing; 2.40A {Saccharomyces cerevisiae} PDB: 2jkd_A
Probab=99.69 E-value=6e-17 Score=143.40 Aligned_cols=110 Identities=19% Similarity=0.284 Sum_probs=82.4
Q ss_pred CCceEEEEcCCCC-C--ccccEEeeccCCCCCEEecCCCCCC----------CCceeEEeCCCcccccceEEEEECC---
Q 015167 272 NGEWLLVPSGSET-V--VSQPIYLSRSDENEPYLIGSESQED----------FPRTSIVIPSAQVSKMHAHIRYKDG--- 335 (412)
Q Consensus 272 ~~~w~l~~~~~~~-~--~~~~i~l~~~~~~~~~~iGR~~~~~----------~~~~~~~i~~~~vSr~Ha~i~~~~~--- 335 (412)
...|.|....+.. . ..+.+.|.. ...++|||.+..+ ...||++|+++.|||+||+|.+..+
T Consensus 76 ~~~~~L~v~k~g~k~~~~i~~~~L~~---~s~y~IGR~~~~~~~~~~~~~~e~~~cDIvL~dp~VSR~HA~I~~~~~~~~ 152 (205)
T 3elv_A 76 RTMYELVIYRKNDKDKGPWKRYDLNG---RSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGI 152 (205)
T ss_dssp SCCEEEEEEEGGGCTTCCSEEEECSS---CSEEEEEECCCC---------CCCCCCSEEECCTTSCTTCEEEEEEEETTE
T ss_pred CCceEEEEEeCCCcccccceEEEecC---CCceeecccccccccccccccccCccceEEeCCCCCCcccEEEEEecCCCc
Confidence 3468887765432 1 224555543 6789999996411 2248999999999999999987643
Q ss_pred -EEEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECCCC-ceEEEEEEe
Q 015167 336 -AFYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSDK-KATFQVKVI 389 (412)
Q Consensus 336 -~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~-~~~f~~~~~ 389 (412)
.|+|+||+|+||||||+. ++.++.+++|++||+|.||... ...|++...
T Consensus 153 ~~~~l~DLgStNGTfVNG~-----rI~~~~~~~L~~GD~I~fG~s~r~~~~el~f~ 203 (205)
T 3elv_A 153 LKCYVMDLDSSNGTCLNNV-----VIPGARYIELRSGDVLTLSEFEEDNDYELIFM 203 (205)
T ss_dssp EEEEEEECSCSSCCEETTE-----ECCBTSCEECCTTCEEESSSSGGGCSEEEEEE
T ss_pred eeEEEEeCCCCCCCeECCE-----ECCCCceeECCCCCEEEECCCCCCCCeEEEEE
Confidence 499999999999999999 9988888999999999999853 123555443
No 17
>1mzk_A Kinase associated protein phosphatase; beta sandwich, hydrolase; NMR {Arabidopsis thaliana} SCOP: b.26.1.2
Probab=99.69 E-value=2.3e-16 Score=133.38 Aligned_cols=102 Identities=19% Similarity=0.295 Sum_probs=78.2
Q ss_pred ceEEEEcCCCCCccccEEeecc-CCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECC--EEEEEEcCCccceee
Q 015167 274 EWLLVPSGSETVVSQPIYLSRS-DENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDG--AFYLIDLRSEHGTYI 350 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~~-~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~--~~~i~Dl~S~nGt~v 350 (412)
.+.|....+.. ....+.+... ..+.+++|||.+++ +++|++..|||+||+|.++++ .|+|+|++|+|||||
T Consensus 7 ~~~L~v~~G~~-~g~~~~l~~~~~~~~~~~IGR~~~~-----di~l~d~~VSr~Ha~i~~~~~~~~~~l~DlgS~NGT~v 80 (139)
T 1mzk_A 7 WLFLEVIAGPA-IGLQHAVNSTSSSKLPVKLGRVSPS-----DLALKDSEVSGKHAQITWNSTKFKWELVDMGSLNGTLV 80 (139)
T ss_dssp EEEEEECSSTT-CSCEEEECTTCSTTCSEEEESSSSC-----SEECCCTTSSSEEEEEEEETTTTEEEEEETTCSSCCEE
T ss_pred eEEEEEEeCCC-CCeEEEecCCCCccceEEeeCCCCC-----CEEeCCCCCChHHcEEEEECCCCEEEEEECCCCCCEEE
Confidence 34555444332 2355656531 12348999999875 699999999999999999874 799999999999999
Q ss_pred eCcCCceeecCC--------CCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 351 TDNEGRRYRVSP--------NFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 351 n~~~~~~~~l~~--------~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|+. ++.+ +.+++|++||+|.||... |.|...
T Consensus 81 Ng~-----~i~~~~~~~~~~~~~~~L~~GD~I~iG~~~---~~~~~~ 119 (139)
T 1mzk_A 81 NSH-----SISHPDLGSRKWGNPVELASDDIITLGTTT---KVYVRI 119 (139)
T ss_dssp TTE-----ESSCCCTTTCCCCCCEECCTTEEEECSSSC---EEEEEE
T ss_pred CCE-----ECcCcccccccCCceEECCCCCEEEECCEE---EEEEEc
Confidence 998 7763 679999999999999973 454444
No 18
>2kfu_A RV1827 PThr 22; FHA domain, phosphorylation, intramolecular interaction, glutamate metabolism, phosphoprotein, protein binding; HET: TPO; NMR {Mycobacterium tuberculosis} PDB: 2kkl_A
Probab=99.68 E-value=1.7e-16 Score=136.95 Aligned_cols=97 Identities=23% Similarity=0.339 Sum_probs=76.1
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeee
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 351 (412)
...|.|....+.. ....+.|. ...++|||.+++ +++|++..|||+||+|.++++.|+|+|++|+||||||
T Consensus 53 ~~~~~L~v~~G~~-~g~~~~L~----~~~~~IGR~~~~-----di~l~d~~VSr~HA~I~~~~~~~~l~DlgS~NGT~VN 122 (162)
T 2kfu_A 53 PGSALLVVKRGPN-AGSRFLLD----QAITSAGRHPDS-----DIFLDDVTVSRRHAEFRLENNEFNVVDVGSLNGTYVN 122 (162)
T ss_dssp SSCCEEEEEESTT-CSCEEETT----SSEEEEESCSSS-----SEESTTTSSSSCSEEEEEETTEEEEECCCCSSCEEET
T ss_pred CccEEEEEEeCCC-CCeEEEEC----CCCEEECCCCCC-----CEEECCCCcChhhEEEEEECCEEEEEECCCCCCeEEC
Confidence 3455665544322 23445453 367999999865 6999999999999999999999999999999999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
+. ++. ++.|++||+|+||.. .|+|...
T Consensus 123 g~-----~i~---~~~L~~GD~I~iG~~---~l~f~~~ 149 (162)
T 2kfu_A 123 RE-----PVD---SAVLANGDEVQIGKF---RLVFLTG 149 (162)
T ss_dssp TB-----CCS---EEECCSSCEEEETTE---EEEEECS
T ss_pred CE-----Ecc---eEECCCCCEEEECCE---EEEEEeC
Confidence 98 664 689999999999985 4555543
No 19
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=99.68 E-value=1.8e-16 Score=135.93 Aligned_cols=89 Identities=22% Similarity=0.402 Sum_probs=74.1
Q ss_pred cccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEE--------ECCEEEEEEcCCccceeeeCcCCcee
Q 015167 287 SQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRY--------KDGAFYLIDLRSEHGTYITDNEGRRY 358 (412)
Q Consensus 287 ~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~--------~~~~~~i~Dl~S~nGt~vn~~~~~~~ 358 (412)
...+.+.. ...++|||.+.+ +++|+++.|||.||+|.+ .++.|+|+|+ |+||||||+.
T Consensus 29 g~~~~l~~---~~~~~IGR~~~~-----di~l~d~~VSr~Ha~I~~~~~~~~~~~~~~~~l~Dl-S~NGT~VNg~----- 94 (151)
T 2jqj_A 29 EQKVEITN---RNVTTIGRSRSC-----DVILSEPDISTFHAEFHLLQMDVDNFQRNLINVIDK-SRNGTFINGN----- 94 (151)
T ss_dssp EEEEEEEC---CSCEEEESSTTS-----SEECCCTTCCTTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEETTE-----
T ss_pred ceEEEEcC---CCeEEeCCCCCC-----CEEECCCCCccccCEEEEecccCCcCcCCEEEEEEC-CCCCeEECCE-----
Confidence 35566653 478999999864 699999999999999999 7788999999 9999999998
Q ss_pred ecCCCCcEEeCCCCEEEECCCCceEEEEEEeccC
Q 015167 359 RVSPNFPARFRPSNSIQFGSDKKATFQVKVIRST 392 (412)
Q Consensus 359 ~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~~~~ 392 (412)
++.++ +++|++||+|.||... .|.|......
T Consensus 95 ~i~~~-~~~L~~GD~I~lG~~~--~~~f~~~~~~ 125 (151)
T 2jqj_A 95 RLVKK-DYILKNGDRIVFGKSC--SFLFKYASSS 125 (151)
T ss_dssp ECCSS-CEEECSSEEEEETTTE--EEEEEECSSC
T ss_pred EcCCC-ceECCCCCEEEECCCc--EEEEEEcCCC
Confidence 88877 8999999999999942 4666665433
No 20
>1r21_A Antigen KI-67; beta sandwich, cell cycle; NMR {Homo sapiens} SCOP: b.26.1.2 PDB: 2aff_A*
Probab=99.67 E-value=1e-16 Score=133.79 Aligned_cols=77 Identities=21% Similarity=0.270 Sum_probs=68.4
Q ss_pred CCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECC
Q 015167 299 EPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGS 378 (412)
Q Consensus 299 ~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~ 378 (412)
..++|||.+++ +++|++..|||+||+|.++++.|+|+|++|+||||||+. ++. .++.|++||+|.||.
T Consensus 33 ~~~~IGR~~~~-----di~l~d~~VSr~Ha~i~~~~~~~~l~Dl~S~nGt~vNg~-----~i~--~~~~L~~Gd~i~iG~ 100 (128)
T 1r21_A 33 STCLFGRGIEC-----DIRIQLPVVSKQHCKIEIHEQEAILHNFSSTNPTQVNGS-----VID--EPVRLKHGDVITIID 100 (128)
T ss_dssp SEEEEESSTTS-----SEECCCTTSCTTCEEEEECSSCEEECCCCSSSCCEETTE-----ECS--SCEECCTTEEEECSS
T ss_pred CCEEECCCCCC-----CEEECCCCCChhHEEEEEECCEEEEEECCCCCCEEECCE-----ECC--CcEEcCCCCEEEECC
Confidence 67999998875 699999999999999999999999999999999999998 775 479999999999998
Q ss_pred CCceEEEEEEec
Q 015167 379 DKKATFQVKVIR 390 (412)
Q Consensus 379 ~~~~~f~~~~~~ 390 (412)
. .|+|....
T Consensus 101 ~---~~~~~~~~ 109 (128)
T 1r21_A 101 R---SFRYENES 109 (128)
T ss_dssp C---EEEEEEC-
T ss_pred E---EEEEEeCC
Confidence 6 57776653
No 21
>1qu5_A Protein kinase SPK1; FHA, RAD53, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.65 E-value=1e-16 Score=141.15 Aligned_cols=105 Identities=17% Similarity=0.362 Sum_probs=79.5
Q ss_pred CCceEEE-EcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEEC---------------C
Q 015167 272 NGEWLLV-PSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKD---------------G 335 (412)
Q Consensus 272 ~~~w~l~-~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~---------------~ 335 (412)
.+.|..+ +.... ...+.+.+.. ...+++|||.+.+ +++|+++.|||.||+|.+.+ +
T Consensus 26 ~g~~l~L~~~~~~-~~~~~i~L~~--~~~~~~IGR~~~~-----di~l~d~~VSr~HA~I~~~~~~~g~~~~e~~~~~~~ 97 (182)
T 1qu5_A 26 NGRFLTLKPLPDS-IIQESLEIQQ--GVNPFFIGRSEDC-----NCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLD 97 (182)
T ss_dssp SSCCEEECCCTTS-SSCSCCCBTT--CCSSEEESSSTTS-----SSCCCCTTSCSSCEEEEEECCCCCSSCCSSCCCSCC
T ss_pred CccEEEEEeCCCC-CcceEEEEcC--CCceEEECCCCCC-----CEEECCCCcChHHeEEEEecCccccccccccccccc
Confidence 4455544 33322 2234444432 2346999999865 69999999999999999987 8
Q ss_pred EEEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEE-----CCCCceEEEEEEecc
Q 015167 336 AFYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQF-----GSDKKATFQVKVIRS 391 (412)
Q Consensus 336 ~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~-----G~~~~~~f~~~~~~~ 391 (412)
.|+|+|+ |+||||||+. ++.++.+++|++||+|.| |.. .+.|++.....
T Consensus 98 ~~~l~Dl-StNGT~VNg~-----ri~~~~~~~L~~GD~I~l~~d~~G~~-~l~f~~~~~~~ 151 (182)
T 1qu5_A 98 DIWYCHT-GTNVSYLNNN-----RMIQGTKFLLQDGDEIKIIWDKNNKF-VIGFKVEINDT 151 (182)
T ss_dssp EEEECCC-SSSCCEETTE-----ECCSSEEEECCTTBCCEEEEEGGGTE-EEECCEEESCC
T ss_pred eEEEEEC-CcCCeEECCE-----EcCCCcceEcCCCCEEEEEEcCCCCE-EEEEEEEeCCC
Confidence 9999999 9999999999 998888999999999999 875 34566655433
No 22
>3oun_A Putative uncharacterized protein TB39.8; peptidoglycan, Ser/Thr kinase, pseudokinase, FHA domain, REG phosphorylation; HET: TPO; 2.71A {Mycobacterium tuberculosis}
Probab=99.65 E-value=4.4e-16 Score=133.01 Aligned_cols=75 Identities=24% Similarity=0.409 Sum_probs=66.4
Q ss_pred ccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeeeCcCCceeecCCCCcEE
Q 015167 288 QPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPAR 367 (412)
Q Consensus 288 ~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 367 (412)
+.+.|.. ..++|||.+++ +++|+++.|||+||+|.++++.|+|+|++|+||||||+. ++. +.+
T Consensus 78 ~~~~L~~----~~~~IGR~~~~-----dI~L~d~~VSr~HA~I~~~~~~~~l~DlgStNGT~VNG~-----~i~---~~~ 140 (157)
T 3oun_A 78 RTYQLRE----GSNIIGRGQDA-----QFRLPDTGVSRRHLEIRWDGQVALLADLNSTNGTTVNNA-----PVQ---EWQ 140 (157)
T ss_dssp CEEECCS----EEEEEESSTTC-----SEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS---EEE
T ss_pred eEEEECC----CcEEEEeCCCC-----CEEeCCCCcChhHEEEEEECCEEEEEECCCCCCeEECCE-----ECc---eEE
Confidence 4555543 56999998865 699999999999999999999999999999999999998 774 689
Q ss_pred eCCCCEEEECCC
Q 015167 368 FRPSNSIQFGSD 379 (412)
Q Consensus 368 l~~gd~i~~G~~ 379 (412)
|++||+|.||..
T Consensus 141 L~~GD~I~lG~~ 152 (157)
T 3oun_A 141 LADGDVIRLGHS 152 (157)
T ss_dssp CCTTCEEEETTE
T ss_pred CCCCCEEEECCE
Confidence 999999999986
No 23
>1g6g_A Protein kinase RAD53; beta-sandwich, phosphopeptide complex, cell cycle; HET: TPO; 1.60A {Saccharomyces cerevisiae} SCOP: b.26.1.2
Probab=99.64 E-value=5.4e-16 Score=129.07 Aligned_cols=80 Identities=19% Similarity=0.321 Sum_probs=69.6
Q ss_pred CCEEecCCCCCCCCceeEEeCCC-cccccceEEEE-ECCEEEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEE
Q 015167 299 EPYLIGSESQEDFPRTSIVIPSA-QVSKMHAHIRY-KDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQF 376 (412)
Q Consensus 299 ~~~~iGR~~~~~~~~~~~~i~~~-~vSr~Ha~i~~-~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~ 376 (412)
..++|||.+++ +++|+++ .|||.||+|.+ .++.|+|+|+ |+||||||+. ++.++++++|++||+|.|
T Consensus 36 ~~~~IGR~~~~-----di~l~~~~~vSr~Ha~i~~~~~g~~~l~Dl-S~NGT~vNg~-----~l~~~~~~~L~~Gd~I~l 104 (127)
T 1g6g_A 36 KVWTFGRNPAC-----DYHLGNISRLSNKHFQILLGEDGNLLLNDI-STNGTWLNGQ-----KVEKNSNQLLSQGDEITV 104 (127)
T ss_dssp EEEEEESSTTS-----SEECCSCTTSCSSCEEEEECTTSCEEEEEC-CSSCCEETTE-----ECCTTCCEECCTTCEEEE
T ss_pred CCEEECCCCCC-----CEEeCCCCCCChhHeEEEECCCCcEEEEEC-CcCCeEECCE-----EcCCCCeEEcCCCCEEEE
Confidence 47999999875 6999987 69999999999 5889999999 9999999998 999889999999999999
Q ss_pred CCCC---ceEEEEEEe
Q 015167 377 GSDK---KATFQVKVI 389 (412)
Q Consensus 377 G~~~---~~~f~~~~~ 389 (412)
|... .+.|.|...
T Consensus 105 G~~~~~~~i~f~~~~~ 120 (127)
T 1g6g_A 105 GVGVESDILSLVIFIN 120 (127)
T ss_dssp CTTSGGGCEEEEEEEC
T ss_pred CCCccCceEEEEEEeC
Confidence 9863 345666543
No 24
>1g3g_A Protien kinase SPK1; FHA domain, RAD53, phosphopeptide, phosphoprotein, transferase; NMR {Saccharomyces cerevisiae} SCOP: b.26.1.2 PDB: 1j4o_A 1j4p_A* 1j4q_A* 1k3j_A 1k3n_A* 1k3q_A* 2a0t_A* 2jqi_A*
Probab=99.64 E-value=6e-16 Score=134.38 Aligned_cols=104 Identities=14% Similarity=0.229 Sum_probs=79.9
Q ss_pred ceEEEEcCCCCCccccEEeec-------cCCCCCEEecCCCCCCCCceeEEeCCC-cccccceEEEE-ECCEEEEEEcCC
Q 015167 274 EWLLVPSGSETVVSQPIYLSR-------SDENEPYLIGSESQEDFPRTSIVIPSA-QVSKMHAHIRY-KDGAFYLIDLRS 344 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~-------~~~~~~~~iGR~~~~~~~~~~~~i~~~-~vSr~Ha~i~~-~~~~~~i~Dl~S 344 (412)
.|.|....+.. .+..+.+.. +.....++|||.+.+ +++|++. .|||.||+|.+ .++.|+|+|+ |
T Consensus 33 ~~~L~v~~G~~-~g~~~~l~~~~v~~~~~~~~~~~~IGR~~~~-----di~l~d~~~vSr~Ha~I~~~~~g~~~l~Dl-S 105 (164)
T 1g3g_A 33 VCRVICTTGQI-PIRDLSADISQVLKEKRSIKKVWTFGRNPAC-----DYHLGNISRLSNKHFQILLGEDGNLLLNDI-S 105 (164)
T ss_dssp CEEEECSSSSS-CCEEECCCHHHHHHCSSSCCEEEEEESSSSS-----SEECCCCTTTTSSCEEEEECSTTCEEEEEC-C
T ss_pred cEEEEEecCCC-CCeEEEeccccccccccccCCcEEECCCCCC-----CEEeCCcCCcChhHEEEEECCCCCEEEEEC-C
Confidence 46666555432 234444432 112347999999875 6999987 69999999999 4899999999 9
Q ss_pred ccceeeeCcCCceeecCCCCcEEeCCCCEEEECCC---CceEEEEEEe
Q 015167 345 EHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSD---KKATFQVKVI 389 (412)
Q Consensus 345 ~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~---~~~~f~~~~~ 389 (412)
+||||||+. ++.++.+++|++||+|.||.. ..+.|.|...
T Consensus 106 ~NGT~vNg~-----~i~~~~~~~L~~GD~I~iG~~~~~~~~~f~~~~~ 148 (164)
T 1g3g_A 106 TNGTWLNGQ-----KVEKNSNQLLSQGDEITVGVGVESDILSLVIFIN 148 (164)
T ss_dssp SSCEEETTE-----EECTTEEEECCTTCEEEESCSSTTSCEEEEEEEC
T ss_pred CCCeEECCE-----EcCCCCceEcCCCCEEEECCCCCCCcEEEEEEeC
Confidence 999999998 998888999999999999995 3446666654
No 25
>3hx1_A SLR1951 protein; P74513_SYNY3, adenylate cyclase-like protein, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Synechocystis SP}
Probab=99.63 E-value=9.7e-16 Score=127.98 Aligned_cols=80 Identities=28% Similarity=0.414 Sum_probs=65.7
Q ss_pred ccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE---CC--EEEEEEc-----CCccceeeeCcCCce
Q 015167 288 QPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK---DG--AFYLIDL-----RSEHGTYITDNEGRR 357 (412)
Q Consensus 288 ~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~---~~--~~~i~Dl-----~S~nGt~vn~~~~~~ 357 (412)
+.+.+.. ..++|||.+.+ +++|+++.|||.||+|.+. ++ .|+|+|+ +|+||||||+.
T Consensus 23 ~~~~l~~----~~~~IGR~~~~-----di~l~d~~VSr~Ha~I~~~~~~~g~~~~~l~Dl~~~~~~S~NGT~vNg~---- 89 (131)
T 3hx1_A 23 REVLLTE----TFYTIGRSPRA-----DIRIKSQFVSRIHAVLVRKSSDDVQAAYRIIDGDEDGQSSVNGLMINGK---- 89 (131)
T ss_dssp EEEEECS----SEEEEESSTTS-----SEECCCSSSCTTCEEEEEC------CCEEEEESCTTSCCCSSCEEETTE----
T ss_pred EEEEECC----CCEEECCCCCC-----CEEECCCCcChhheEEEEEccCCCceEEEEEECCCCCCCCCCceEECCE----
Confidence 4555543 67999999875 6999999999999999986 33 4999999 79999999998
Q ss_pred eecCCCCcEEeCCCCEEEECCCCceEE
Q 015167 358 YRVSPNFPARFRPSNSIQFGSDKKATF 384 (412)
Q Consensus 358 ~~l~~~~~~~l~~gd~i~~G~~~~~~f 384 (412)
++. .++|++||+|.||+...+.|
T Consensus 90 -~i~---~~~L~~GD~I~iG~~~~~~~ 112 (131)
T 3hx1_A 90 -KVQ---EHIIQTGDEIVMGPQVSVRY 112 (131)
T ss_dssp -EES---EEECCTTCEEECSTTCEEEE
T ss_pred -EeE---eEECCCCCEEEECCEEEEEE
Confidence 775 38999999999999854433
No 26
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.63 E-value=6.4e-15 Score=146.47 Aligned_cols=253 Identities=16% Similarity=0.148 Sum_probs=156.8
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~ 86 (412)
.+..|+|+.|+++++++|+++ |+++.+.+.+.+.. .+ .+++..+|..+..++........+.+ .+.++|..|.+.
T Consensus 58 ~~~~~~~~~l~~~~~~~l~~l--g~~~~~~~~~~~~~-~~-~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~i~r~~l~~~ 132 (407)
T 3rp8_A 58 IKPVGAAISVWPNGVKCMAHL--GMGDIMETFGGPLR-RM-AYRDFRSGENMTQFSLAPLIERTGSR-PCPVSRAELQRE 132 (407)
T ss_dssp C----CEEEECHHHHHHHHHT--TCHHHHHHHSCCCC-EE-EEEETTTCCEEEEEECHHHHHHHSSC-CEEEEHHHHHHH
T ss_pred CCCcCeeEEECHHHHHHHHHC--CCHHHHHhhcCCCc-ce-EEEECCCCCEeEEecchhhhhhcCCc-eEEEEHHHHHHH
Confidence 356789999999999999999 99999998876544 44 57775447877777654322222233 278999999999
Q ss_pred HHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHHHhhhhccccccccCccccchhhcccc
Q 015167 87 LAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLLMSWLLCLSSLKLTTRIVHASKLCSYE 166 (412)
Q Consensus 87 L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 166 (412)
|.+.+..+.|+++++|++++.++++++|++.||++++||+||+|||++|.||..+. +.......++.. .+....
T Consensus 133 L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV~AdG~~S~vr~~l~--~~~~~~~~~~~~----~~~~~~ 206 (407)
T 3rp8_A 133 MLDYWGRDSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLIAADGSHSALRPWVL--GFTPQRRYAGYV----NWNGLV 206 (407)
T ss_dssp HHHHHCGGGEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCCTTCSSHHHHH--SSCCCCEEEEEE----EEEEEE
T ss_pred HHHhCCcCEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEEECCCcChHHHHHhc--CCCCCCcccCcE----EEEEEE
Confidence 99999658899999999999999999999999999999999999999999954410 000000000000 000000
Q ss_pred ccccceeeeehhhhHHHHHHhhhccceeecCCccccceeeeecCCCCcccchheecccC-CeEEEEEEeeeCCCCCCCCC
Q 015167 167 SARRLRVAIIHRLARSAAMMASTYNGYLSVGLGPLSFLTKFWIPHPGRVVRRFFIDLAM-PLMLNWVLGGNSSKLEGRSP 245 (412)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~W~~~~~~~~~~~~~~ 245 (412)
+.. .... .......+++++... + .... ...++|.+..+..... ..+
T Consensus 207 ~~~-------~~~~-----~~~~~~~~~~~~~~~-------------------~-~~p~~~~~~~~~~~~~~~~~~-~~~ 253 (407)
T 3rp8_A 207 EID-------EALA-----PGDQWTTFVGEGKQV-------------------S-LMPVSAGRFYFFFDVPLPAGL-AED 253 (407)
T ss_dssp ECC-------TTTC-----CTTEEEEEEETTEEE-------------------E-EEEETTTEEEEEEEEECCTTC-SCC
T ss_pred ecc-------cccC-----CCCceEEEECCCcEE-------------------E-EEEcCCCeEEEEEEeCCCcCC-CCC
Confidence 000 0000 000111122221110 0 1111 2225566554433322 235
Q ss_pred ccchhhHHHHHhhcccCCchhhhhccCC----ceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCC
Q 015167 246 CCRLSDKASDQLRTWLRDNDALERAMNG----EWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFP 312 (412)
Q Consensus 246 ~~~~~~~~~~~~~~W~p~~~~l~~a~~~----~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~ 312 (412)
++...+.+.+.+.+|.+.+..++..... .|.+++.... .+|..++.++||.+.+..+|
T Consensus 254 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~rv~LvGDAAh~~~P 315 (407)
T 3rp8_A 254 RDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPF---------SRLVRGRVALLGDAGHSTTP 315 (407)
T ss_dssp TTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCC---------SCCEETTEEECGGGTCCCCG
T ss_pred chhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCC---------CceecCCEEEEEcccccCCc
Confidence 6677888999999999888777765532 2777766543 22223678999999998766
No 27
>1wln_A Afadin; beta sandwich, FHA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.26.1.2
Probab=99.63 E-value=1.2e-15 Score=125.70 Aligned_cols=79 Identities=19% Similarity=0.306 Sum_probs=66.7
Q ss_pred CCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECC
Q 015167 299 EPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGS 378 (412)
Q Consensus 299 ~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~ 378 (412)
..++|||.... .|+++|+++.|||+||+|.++++.|+|+|++|+||||||+. ++. ++++|++||+|.||.
T Consensus 36 ~~~~IGr~r~~---~~di~l~~~~vSr~Ha~i~~~~~~~~l~dl~S~ngt~vNg~-----~i~--~~~~L~~GD~I~iG~ 105 (120)
T 1wln_A 36 SVTEVGTEKFD---DNSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVDGQ-----RIS--ETTMLQSGMRLQFGT 105 (120)
T ss_dssp EEEECSSSCCS---TTCCCCCCTTCCSSCEEEEESSSCEEEEESCSSSCEEETSC-----BCS--SCEEECTTCEEEETT
T ss_pred CCEEECCCCCC---CCcEEECCCCCchhheEEEEcCCEEEEEECCCCCCEEECCE-----EcC--CCEECCCCCEEEECC
Confidence 56899974211 26799999999999999999999999999999999999998 775 578999999999999
Q ss_pred CCceEEEEEEe
Q 015167 379 DKKATFQVKVI 389 (412)
Q Consensus 379 ~~~~~f~~~~~ 389 (412)
.. .|+|...
T Consensus 106 ~~--~~~f~~p 114 (120)
T 1wln_A 106 SH--VFKFVDP 114 (120)
T ss_dssp TE--EEEEECS
T ss_pred ce--EEEEECC
Confidence 52 5666543
No 28
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=99.54 E-value=1.1e-14 Score=144.19 Aligned_cols=87 Identities=24% Similarity=0.335 Sum_probs=73.8
Q ss_pred ccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeeeCcCCceeecCCCCcEE
Q 015167 288 QPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYITDNEGRRYRVSPNFPAR 367 (412)
Q Consensus 288 ~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~ 367 (412)
..+.+.. ..++|||.+++ +++++++.|||.||+|.++++.|+|+|++|+||||||+. ++. .+++
T Consensus 299 ~~~~l~~----~~~~iGR~~~~-----di~l~~~~vSr~Ha~i~~~~~~~~l~Dl~S~nGt~vng~-----~i~--~~~~ 362 (388)
T 2ff4_A 299 RGYPLQA----AATRIGRLHDN-----DIVLDSANVSRHHAVIVDTGTNYVINDLRSSNGVHVQHE-----RIR--SAVT 362 (388)
T ss_dssp CEEECCS----SEEEEESSTTS-----SEECCCTTSCTTCEEEEECSSCEEEEECSCSSCCEETTE-----ECS--SEEE
T ss_pred cEEEECC----CCEEEecCCCC-----eEEECCCccChhHeEEEEECCEEEEEECCCCCCeEECCE-----ECC--CceE
Confidence 4555544 67999999875 699999999999999999999999999999999999998 774 5899
Q ss_pred eCCCCEEEECCCCceEEEEEEeccCC
Q 015167 368 FRPSNSIQFGSDKKATFQVKVIRSTP 393 (412)
Q Consensus 368 l~~gd~i~~G~~~~~~f~~~~~~~~~ 393 (412)
|++||+|.||+. .|.|.....+|
T Consensus 363 L~~gd~i~~G~~---~~~~~~~~~~p 385 (388)
T 2ff4_A 363 LNDGDHIRICDH---EFTFQISAGTH 385 (388)
T ss_dssp ECTTCEEEETTE---EEEEECSCCCC
T ss_pred CCCCCEEEECCE---EEEEEeCCCCC
Confidence 999999999985 57776654433
No 29
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=99.49 E-value=1.5e-13 Score=112.95 Aligned_cols=96 Identities=20% Similarity=0.361 Sum_probs=72.7
Q ss_pred ceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEE-ECCEEEEEEcCCccceeeeC
Q 015167 274 EWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRY-KDGAFYLIDLRSEHGTYITD 352 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~-~~~~~~i~Dl~S~nGt~vn~ 352 (412)
...|+..+........+.+.- +...+|||.+++ ||+|++..||++||+|.. .++.|+|+|++ +|||||||
T Consensus 26 ~PhLvnLn~Dp~~s~~l~y~L---~~~t~IGR~~~~-----DI~L~~~~Vs~~Ha~I~~~~~g~~~l~dl~-~ngt~VNG 96 (124)
T 3fm8_A 26 KCFLVNLNADPALNELLVYYL---KEHTLIGSANSQ-----DIQLCGMGILPEHCIIDITSEGQVMLTPQK-NTRTFVNG 96 (124)
T ss_dssp -CEEEETTCCTTSSCCCEEEC---CSEEEEESSTTC-----SEECCSTTCCSSCEEEEECTTSCEEEEECT-TCCEEETT
T ss_pred ccEEEEeCCCCccCceEEEEC---CCCeEECCCCCC-----CEEECCCCeecceEEEEECCCCeEEEEECC-CCCEEECC
Confidence 456666655433222222221 124899998865 699999999999999998 58889999995 79999999
Q ss_pred cCCceeecCCCCcEEeCCCCEEEECCCCceEEEEE
Q 015167 353 NEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVK 387 (412)
Q Consensus 353 ~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~ 387 (412)
. ++. ++++|++||+|.||... .|+|.
T Consensus 97 ~-----~V~--~~~~L~~GD~I~lG~~~--~FrFn 122 (124)
T 3fm8_A 97 S-----SVS--SPIQLHHGDRILWGNNH--FFRLN 122 (124)
T ss_dssp E-----ECC--SCEEECTTCEEEETTTE--EEEEE
T ss_pred E-----EcC--CcEECCCCCEEEECCCe--EEEEE
Confidence 8 775 57999999999999874 57765
No 30
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=99.49 E-value=2.2e-13 Score=116.87 Aligned_cols=103 Identities=20% Similarity=0.289 Sum_probs=76.6
Q ss_pred ceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECC----EEEEEEcCCcccee
Q 015167 274 EWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDG----AFYLIDLRSEHGTY 349 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~----~~~i~Dl~S~nGt~ 349 (412)
...|+-.+.....+..+-+. -.....+|||.... +.|||+|+++.||++||.|.++++ .+++.|++|+||||
T Consensus 38 ~PhLvnLn~Dp~ls~~lvy~--L~~g~t~IGR~~~~--~~~DI~L~~~~Vs~~H~~i~~~~~~~~~~~~~~d~~S~ngt~ 113 (154)
T 4ejq_A 38 TPHLVNLNEDPLMSECLLYY--IKDGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTY 113 (154)
T ss_dssp SCEEEECCCCTTCSSEEEEE--CCSEEEEEECSSCS--SCCSEECCCTTCCSEEEEEEEECTTSSSCEEEEEECTTCCEE
T ss_pred CceEEEecCCcccCceEEEE--eCCCCEEEcCCCCC--CCCCEEECCCCcccccEEEEEecCCCceeEEEEecCCCCceE
Confidence 35666655543322333222 12467999997632 237899999999999999999864 48999999999999
Q ss_pred eeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 350 ITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 350 vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|||. ++. .++.|++||+|.||... .|+|..+
T Consensus 114 VNG~-----~i~--~~~~L~~GD~I~~G~~~--~Frf~~P 144 (154)
T 4ejq_A 114 VNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNHP 144 (154)
T ss_dssp ETTE-----ECC--SCEECCTTCEEEETTTE--EEEEECH
T ss_pred ECCE-----EcC--CceECCCCCEEEECCcE--EEEEcCh
Confidence 9998 774 57999999999999874 4777654
No 31
>3huf_A DNA repair and telomere maintenance protein NBS1; NBS1, FHA domain, BRCT domain, phosphoprotein binding, phosp binding, DNA repair; HET: DNA TPO; 2.15A {Schizosaccharomyces pombe} PDB: 3hue_A* 3i0m_A* 3i0n_A*
Probab=99.41 E-value=5.4e-13 Score=124.51 Aligned_cols=101 Identities=22% Similarity=0.327 Sum_probs=75.7
Q ss_pred eEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEEC-----------CEEEEEEcC
Q 015167 275 WLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKD-----------GAFYLIDLR 343 (412)
Q Consensus 275 w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~-----------~~~~i~Dl~ 343 (412)
|.|.+.++.. .++++.|.. +. ++|||....+ .+.+.++++.|||+||+|.+.. ..++|+||+
T Consensus 2 WiL~~~~d~~-~Gkr~~L~p---g~-YlIGR~~~~~--~~lI~idD~SISRqHA~I~v~~v~~~dg~~~~~~~l~I~DLg 74 (325)
T 3huf_A 2 WIIEAEGDIL-KGKSRILFP---GT-YIVGRNVSDD--SSHIQVISKSISKRHARFTILTPSEKDYFTGGPCEFEVKDLD 74 (325)
T ss_dssp EEEEESTTTT-TTCCEEECS---EE-EEEESSCCCB--TTEEECCCTTSCSSCEEEEECCCCHHHHHHCCCCCEEEEECS
T ss_pred cEEeccCccC-CCeEEEecC---Ce-EEECCCCCcc--CceeecCCCCccccceEEEEecccccccccCCcceEEEEECC
Confidence 8888866432 245666654 34 9999987542 1235889999999999998862 479999999
Q ss_pred CccceeeeCcCCceeecCCCCcEEe-CCCCEEEECCCCceEEEEEEe
Q 015167 344 SEHGTYITDNEGRRYRVSPNFPARF-RPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 344 S~nGt~vn~~~~~~~~l~~~~~~~l-~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|+||||||+. ++.+ +...| .+||.|+||.... .|+++-.
T Consensus 75 SknGTfVNGe-----rI~~-~~~~L~~dgd~I~fG~~~~-~fRl~W~ 114 (325)
T 3huf_A 75 TKFGTKVNEK-----VVGQ-NGDSYKEKDLKIQLGKCPF-TINAYWR 114 (325)
T ss_dssp CSSCEEETTE-----ECCT-TCEEECSSEEEEEETTCSS-CEEEEEC
T ss_pred CCCCEEECCE-----ECCC-ceeeecCCCCEEEecCCcc-eEEEEEe
Confidence 9999999998 8864 44565 4799999998643 5766654
No 32
>3kt9_A Aprataxin; FHA domain, beta sandwich, beta sheet, AMP hydrolase, alternative splicing, disease mutation, DNA damage, DNA repair, DNA-binding; 1.65A {Homo sapiens} SCOP: b.26.1.0
Probab=99.27 E-value=4.1e-11 Score=94.31 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=76.4
Q ss_pred eEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--CCEEEEEEcCCccceeeeC
Q 015167 275 WLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--DGAFYLIDLRSEHGTYITD 352 (412)
Q Consensus 275 w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn~ 352 (412)
..|.+..+.. .+|.|.. .+.++|||++.. .|.+..+||+|+.+..+ .+.+.|+|+| +|++|||+
T Consensus 5 c~L~~~~~~~---~~I~L~~---g~~v~iGR~p~t-------~I~DkrcSR~h~~L~~~~~~g~v~vk~lg-~Np~~vng 70 (102)
T 3kt9_A 5 CWLVRQDSRH---QRIRLPH---LEAVVIGRGPET-------KITDKKCSRQQVQLKAECNKGYVKVKQVG-VNPTSIDS 70 (102)
T ss_dssp EEEEETTSTT---CEEECCB---TCEEEECSSTTT-------CCCCTTSCSSCEEEEEETTTTEEEEEECS-SSCCEETT
T ss_pred EEEEecCCCC---CcEEcCC---CCcEEeccCCcc-------ccccCcccCcceEEEEecCCCEEEEEECc-CCCCeECC
Confidence 4566666542 4788876 677899999975 45799999999999887 4678999995 89999999
Q ss_pred cCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEE
Q 015167 353 NEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKV 388 (412)
Q Consensus 353 ~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~ 388 (412)
. ++.++..+.|++||+|.+-.. ...|++..
T Consensus 71 ~-----~l~k~~~~~L~~GD~l~Ll~~-~~~~~v~f 100 (102)
T 3kt9_A 71 V-----VIGKDQEVKLQPGQVLHMVNE-LYPYIVEF 100 (102)
T ss_dssp E-----ECCBTCEEEECTTCCEEEETT-EEEEEEEE
T ss_pred E-----EcCCCCeEEeCCCCEEEEccC-CceEEEEe
Confidence 8 999999999999999999987 23455544
No 33
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.18 E-value=2.1e-10 Score=114.00 Aligned_cols=126 Identities=28% Similarity=0.282 Sum_probs=97.3
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~ 86 (412)
.++.|+|+.|+++++++|+++ |+++.+.+.+.+.. .+ .+.+ ..|..+...+... ...++.+ .+.++|..|.+.
T Consensus 40 ~~~~g~g~~l~~~~~~~l~~l--g~~~~l~~~~~~~~-~~-~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~i~r~~l~~~ 112 (410)
T 3c96_A 40 IRPLGVGINIQPAAVEALAEL--GLGPALAATAIPTH-EL-RYID-QSGATVWSEPRGV-EAGNAYP-QYSIHRGELQMI 112 (410)
T ss_dssp CCCCSCEEEECHHHHHHHHHT--TCHHHHHHHSEEEC-EE-EEEC-TTSCEEEEEECGG-GGTCSSC-EEEEEHHHHHHH
T ss_pred cccceeEEEEChHHHHHHHHC--CChHHHHhhCCCcc-eE-EEEc-CCCCEEeeccCCc-cccCCCC-eeeeeHHHHHHH
Confidence 355789999999999999999 99999988776444 34 4666 4677665544221 1112344 378999999999
Q ss_pred HHhhc----CCCEEEcCCeEEEEEEeCCeEEEEEcc---C--cEEEeCEEEEecCcCchhHHH
Q 015167 87 LAHAV----GNDIILNDSNVIDFMDHGDKVSVMLEN---G--QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 87 L~~~l----~~~~i~~~~~v~~i~~~~~~v~v~~~d---G--~~~~adllVgADG~~S~vr~~ 140 (412)
|.+.+ +.+.++++++|+++++ +++++|++.+ | .+++||+||+|||++|.||..
T Consensus 113 L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~ 174 (410)
T 3c96_A 113 LLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGADVLVGADGIHSAVRAH 174 (410)
T ss_dssp HHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecCEEEECCCccchhHHH
Confidence 99887 2357999999999998 7788899886 7 579999999999999999543
No 34
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.16 E-value=2.6e-10 Score=112.73 Aligned_cols=117 Identities=15% Similarity=0.137 Sum_probs=93.2
Q ss_pred cccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQIL 87 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L 87 (412)
...|+|+.++++++++|+++ |+++ .....+.. .+ .+.+..+|..+...+.. . ..++|..|.+.|
T Consensus 42 ~~~~~g~~l~~~~~~~l~~~--g~~~--~~~~~~~~-~~-~~~~~~~g~~~~~~~~~-------~---~~~~~~~l~~~L 105 (397)
T 2vou_A 42 SGFGTGIVVQPELVHYLLEQ--GVEL--DSISVPSS-SM-EYVDALTGERVGSVPAD-------W---RFTSYDSIYGGL 105 (397)
T ss_dssp CCCSCEEECCHHHHHHHHHT--TCCG--GGTCBCCC-EE-EEEETTTCCEEEEEECC-------C---CEEEHHHHHHHH
T ss_pred CccccccccChhHHHHHHHc--CCcc--cccccccc-ce-EEEecCCCCccccccCc-------c---cccCHHHHHHHH
Confidence 34689999999999999999 8877 34444333 34 46663266665544321 1 258899999999
Q ss_pred HhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 88 AHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 88 ~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.+++++++++++|+++++++++++|++.||++++||+||+|||++|.||..
T Consensus 106 ~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~ 158 (397)
T 2vou_A 106 YELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKR 158 (397)
T ss_dssp HHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHH
T ss_pred HHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHH
Confidence 99988889999999999999988999999999999999999999999999544
No 35
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.13 E-value=4.1e-10 Score=111.25 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=98.2
Q ss_pred cccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQIL 87 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L 87 (412)
...|.++.++++++++|+++ |+++.+.+...+.. .+ .+++ .+|..+..++...... .++.+.++|..|.+.|
T Consensus 42 ~~~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~-~~-~~~~-~~g~~~~~~~~~~~~~---~~~~~~~~r~~l~~~L 113 (399)
T 2x3n_A 42 RAINGADLLKPAGIRVVEAA--GLLAEVTRRGGRVR-HE-LEVY-HDGELLRYFNYSSVDA---RGYFILMPCESLRRLV 113 (399)
T ss_dssp ---CCCCEECHHHHHHHHHT--TCHHHHHHTTCEEE-CE-EEEE-ETTEEEEEEETTSSCG---GGCEEECCHHHHHHHH
T ss_pred CccCceeeECchHHHHHHHc--CcHHHHHHhCCCcc-ee-EEEe-CCCCEEEecchHHhcc---cCccccccHHHHHHHH
Confidence 45688999999999999999 99999987665433 34 4555 3666666666543211 1223689999999999
Q ss_pred HhhcC---CCEEEcCCeEEEEEEeCCeE--EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 88 AHAVG---NDIILNDSNVIDFMDHGDKV--SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 88 ~~~l~---~~~i~~~~~v~~i~~~~~~v--~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.+. +++++++++|++++.+++++ .|++.||++++||+||+|||.+|.+|..
T Consensus 114 ~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~ 171 (399)
T 2x3n_A 114 LEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGIASYVRRR 171 (399)
T ss_dssp HHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCTTCHHHHH
T ss_pred HHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCCChHHHHH
Confidence 99982 68999999999999988888 8999999999999999999999999544
No 36
>4a0e_A YSCD, type III secretion protein; transport protein, SAD phasing, type III secretion system; 2.04A {Yersinia pestis} PDB: 4d9v_A
Probab=99.11 E-value=3.6e-10 Score=91.42 Aligned_cols=98 Identities=14% Similarity=0.236 Sum_probs=78.7
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCCC-CCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccceeee
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSES-QEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~-~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt~vn 351 (412)
..|.+....+... +..+.+.. ..++||..+ ++ |++|.|+.||+.||+|...+++|+|+ +|+||||+|
T Consensus 3 ~~~klrvlsG~~~-G~~l~L~~----~~~~IGs~~~~~-----DLvL~D~~Vs~~H~~L~~~~~g~~L~--~s~ngt~vd 70 (123)
T 4a0e_A 3 GSWVCRFYQGKHR-GVEVELPH----GRCVFGSDPLQS-----DIVLSDSEIAPVHLVLMVDEEGIRLT--DSAEPLLQE 70 (123)
T ss_dssp CCEEEEECSGGGT-TCEEEECS----EEEEEESCTTTC-----SEECCCTTSCSSCEEEEEETTEEEEE--EESSCCEET
T ss_pred ceEEEEEecCCCC-CcEEEcCC----CcEEECCCCCCC-----CEEEeCCCccceeEEEEECCCeEEEE--eccCCEEEC
Confidence 3677766665442 45666654 679999998 65 69999999999999999999999998 589999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEeccC
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVIRST 392 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~~~~ 392 (412)
+. ++..+ ..|.+|+.+.+|.. .|.|.....+
T Consensus 71 G~-----~v~~~--~~L~~g~~l~lG~~---~l~~~~~~~~ 101 (123)
T 4a0e_A 71 GL-----PVPLG--TLLRAGSCLEVGFL---LWTFVAVGQP 101 (123)
T ss_dssp TE-----ECCTT--CBCCTTSCEEETTE---EEEEEETTSC
T ss_pred CE-----Ecccc--cccCCCCEEEEccE---EEEEEcCCCC
Confidence 98 66543 38999999999986 6777777433
No 37
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.09 E-value=6.2e-10 Score=117.51 Aligned_cols=128 Identities=13% Similarity=0.122 Sum_probs=93.1
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECC-CCcEEE--EEeCCCcccccCCCeEEEEeHHHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGI-SGSWYI--KFDTFTPAAEKGLPVTRVISRMTL 83 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~-~g~~l~--~~~~~~~~~~~g~~~~~~i~r~~L 83 (412)
....|.++.|+++++++|+++ |+++.+.+.+.+.. .+ .+++.. .|.... .++..... ....+ .+.++|..|
T Consensus 48 ~~~~gra~~l~~~tle~l~~l--Gl~~~l~~~~~~~~-~~-~~~~~~~~g~i~~~~~~~~~~~~-~~~~~-~~~l~q~~l 121 (665)
T 1pn0_A 48 KVYNGQADGLQCRTLESLKNL--GLADKILSEANDMS-TI-ALYNPDENGHIRRTDRIPDTLPG-ISRYH-QVVLHQGRI 121 (665)
T ss_dssp CCCSCSCCEECHHHHHHHHTT--TCHHHHHTTCBCCC-EE-EEEEECTTSCEEEEEEEESSCTT-SCSSC-CEECCHHHH
T ss_pred CCCCCceeEEChHHHHHHHHC--CCHHHHHHhccccc-eE-EEEeCCCCcceEeecccCcccCC-CCCCe-eEEeeHHHH
Confidence 345789999999999999999 99999998776544 34 455532 243322 22221111 01222 368999999
Q ss_pred HHHHHhhc---C--CCEEEcCCeEEEEEEeC--------CeEEEEEc---------------------------------
Q 015167 84 QQILAHAV---G--NDIILNDSNVIDFMDHG--------DKVSVMLE--------------------------------- 117 (412)
Q Consensus 84 ~~~L~~~l---~--~~~i~~~~~v~~i~~~~--------~~v~v~~~--------------------------------- 117 (412)
+++|.+.+ + +++++++++++++++++ ++|++++.
T Consensus 122 e~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~ 201 (665)
T 1pn0_A 122 ERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDA 201 (665)
T ss_dssp HHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEEEecccccccccccccccccccccccccccccccc
Confidence 99999987 2 37899999999999875 46888775
Q ss_pred ---------cC--cEEEeCEEEEecCcCchhHHH
Q 015167 118 ---------NG--QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 118 ---------dG--~~~~adllVgADG~~S~vr~~ 140 (412)
+| ++++|||||||||++|.||..
T Consensus 202 ~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~ 235 (665)
T 1pn0_A 202 NYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRT 235 (665)
T ss_dssp SCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHH
T ss_pred cccccccCCCCceEEEEeCEEEeccCCCCHHHHh
Confidence 35 469999999999999999544
No 38
>3uv0_A Mutator 2, isoform B; FHA, protein binding, dimerization; 1.90A {Drosophila melanogaster}
Probab=99.09 E-value=2e-10 Score=88.47 Aligned_cols=67 Identities=18% Similarity=0.253 Sum_probs=56.6
Q ss_pred CCCEEecCCCCCCCCceeEEeCCCcccccceEEEEECCEEEEEEcCCccce-eeeCcCCceeecCCCCcEEeCCCCE---
Q 015167 298 NEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKDGAFYLIDLRSEHGT-YITDNEGRRYRVSPNFPARFRPSNS--- 373 (412)
Q Consensus 298 ~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~~~~~i~Dl~S~nGt-~vn~~~~~~~~l~~~~~~~l~~gd~--- 373 (412)
...+.|||.+.+ +++|+++.||+.||.|...+.+.++. . |+||| ||||. ++ .+..|..||.
T Consensus 20 ~~~~rIGR~~~~-----~l~LddpsVs~~HAti~~~~~G~~~l-~-S~nGtVFVNGq-----rv---~~~~I~~gDtI~g 84 (102)
T 3uv0_A 20 DTIYRIGRQKGL-----EISIADESMELAHATACILRRGVVRL-A-ALVGKIFVNDQ-----EE---TVVDIGMENAVAG 84 (102)
T ss_dssp TCCEEEESSTTS-----TEECCCTTSCTTCEEEEEEETTEEEE-E-ESSSCEEETTE-----EE---SEEEECGGGCBTT
T ss_pred CcEEEEcCCCCC-----cEEECCcccccceEEEEecCCceEEE-E-eccCcEEECCE-----Ee---eeEEccCCccccc
Confidence 678999999875 59999999999999998866544442 2 99995 99998 77 4899999999
Q ss_pred ---EEECCC
Q 015167 374 ---IQFGSD 379 (412)
Q Consensus 374 ---i~~G~~ 379 (412)
++||..
T Consensus 85 ~v~lrFGnv 93 (102)
T 3uv0_A 85 KVKLRFGNV 93 (102)
T ss_dssp EEEEEETTE
T ss_pred EEEEEecCE
Confidence 899986
No 39
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.06 E-value=9.6e-10 Score=112.21 Aligned_cols=120 Identities=15% Similarity=0.120 Sum_probs=91.6
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~ 86 (412)
....|.++.|+++++++|+++ |+++.+.+. .+ ... ... .+. .++.... ....|+.+.++|..|+++
T Consensus 47 ~~~~~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~~~---~~~--~~~---~~~~~~~--~~~~~~~~~i~~~~l~~~ 112 (499)
T 2qa2_A 47 RTGESRGLGFTARTMEVFDQR--GILPAFGPV-ET-STQ---GHF--GGR---PVDFGVL--EGAHYGVKAVPQSTTESV 112 (499)
T ss_dssp CCCCCCSEEECHHHHHHHHHT--TCGGGGCSC-CE-ESE---EEE--TTE---EEEGGGS--TTCCCEEEEEEHHHHHHH
T ss_pred CCCCCceeEECHHHHHHHHHC--CCHHHHHhc-cc-ccc---cee--cce---ecccccC--CCCCCceEecCHHHHHHH
Confidence 345688999999999999999 999888765 21 111 111 122 2333211 113444579999999999
Q ss_pred HHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCc---EEEeCEEEEecCcCchhHHH
Q 015167 87 LAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQ---CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 87 L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~---~~~adllVgADG~~S~vr~~ 140 (412)
|.+.+ .+++++++++|+++++++++|+|++.+++ +++||+||||||++|.||..
T Consensus 113 L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~ 171 (499)
T 2qa2_A 113 LEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTVRKA 171 (499)
T ss_dssp HHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcccHHHHH
Confidence 99987 37899999999999999999999999886 89999999999999999544
No 40
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.06 E-value=1.7e-09 Score=106.11 Aligned_cols=117 Identities=22% Similarity=0.245 Sum_probs=95.4
Q ss_pred cccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQIL 87 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L 87 (412)
+..|.|+.++++++++|+++ |+++.+.+.+.+.. .+ .+.+ . |..+..++.. +.+ .+.++|..|.+.|
T Consensus 47 ~~~~~~~~l~~~~~~~l~~~--g~~~~~~~~~~~~~-~~-~~~~-~-g~~~~~~~~~------~~~-~~~~~r~~l~~~L 113 (379)
T 3alj_A 47 RAFGAGIYLWHNGLRVLEGL--GALDDVLQGSHTPP-TY-ETWM-H-NKSVSKETFN------GLP-WRIMTRSHLHDAL 113 (379)
T ss_dssp CCCSSEEEEEHHHHHHHHHT--TCHHHHHTTCBCCS-CE-EEEE-T-TEEEEEECGG------GCC-EEEEEHHHHHHHH
T ss_pred CCCCceEEeCccHHHHHHHc--CCHHHHHhhCCCcc-ce-EEEe-C-CceeeeccCC------CCc-eEEECHHHHHHHH
Confidence 44689999999999999999 99999988776544 44 5777 3 7666555432 234 3799999999999
Q ss_pred Hhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 88 AHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 88 ~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.+ .+++++++++|++++. ++ .|++.||++++||+||+|||.+|.+|..
T Consensus 114 ~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~vr~~ 165 (379)
T 3alj_A 114 VNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKVRDS 165 (379)
T ss_dssp HHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHHHHH
T ss_pred HHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHHHHH
Confidence 9988 4789999999999987 34 8889999999999999999999999443
No 41
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.06 E-value=1.5e-09 Score=112.16 Aligned_cols=129 Identities=19% Similarity=0.207 Sum_probs=97.1
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhccccccc--ceeEEEECCCCcEEEEEeCCCccc-----ccCCCeEEEEe
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGD--RINGLVDGISGSWYIKFDTFTPAA-----EKGLPVTRVIS 79 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~~-----~~g~~~~~~i~ 79 (412)
.+..+.++.|+++++++|+++ |+++.+.+.+.+... .. .+.....|..+..++...... ....+ .+.++
T Consensus 61 ~~~~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~i~ 136 (549)
T 2r0c_A 61 TITHPRVGTIGPRSMELFRRW--GVAKQIRTAGWPGDHPLDA-AWVTRVGGHEVYRIPLGTADTRATPEHTPEP-DAICP 136 (549)
T ss_dssp CCSSCCCCEECHHHHHHHHHT--TCHHHHHTSSCCTTSBCCE-EEESSBTSCEEEEECCCBTTTSCCCSSCSSC-CEECC
T ss_pred CCCCCceeeeCHHHHHHHHHc--CChHHHHhhcCCcccccce-EEeccCCCceeEeecccccccccccCCCCCc-ccccC
Confidence 355678899999999999999 999999987765432 11 233334566666665432110 01223 26899
Q ss_pred HHHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEcc---C--cEEEeCEEEEecCcCchhHHH
Q 015167 80 RMTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLEN---G--QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 80 r~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~d---G--~~~~adllVgADG~~S~vr~~ 140 (412)
|..|+++|.+.+... ++++++|+++++++++|++++.+ | .+++||+||||||++|.||..
T Consensus 137 ~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~ 201 (549)
T 2r0c_A 137 QHWLAPLLAEAVGER-LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSPTRKA 201 (549)
T ss_dssp HHHHHHHHHHHHGGG-EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHh-cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcHHHHH
Confidence 999999999998444 99999999999999999999887 6 479999999999999999544
No 42
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.04 E-value=1e-09 Score=108.46 Aligned_cols=122 Identities=17% Similarity=0.247 Sum_probs=94.3
Q ss_pred ccccceeeCH-HHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHH
Q 015167 9 LYRGPIQIQS-NALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQIL 87 (412)
Q Consensus 9 ~~Gagi~l~~-~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L 87 (412)
..|.++.+.+ ++.++|+++ |+++.+.+.+.+... .+++ .+|..+....... ....+. ..++|..|.+.|
T Consensus 65 ~~g~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~---~~~~-~~g~~~~~~~~~~-~~~~~~---~~i~r~~l~~~L 134 (398)
T 2xdo_A 65 IFGGTLDLHKGSGQEAMKKA--GLLQTYYDLALPMGV---NIAD-EKGNILSTKNVKP-ENRFDN---PEINRNDLRAIL 134 (398)
T ss_dssp CCSCCEECCTTTHHHHHHHT--TCHHHHHHHCBCCCE---EEEC-SSSEEEEECCCGG-GTTSSC---CEECHHHHHHHH
T ss_pred ccCCeeeeCCccHHHHHHhc--ChHHHHHHhhcccce---EEEC-CCCCchhhccccc-cCCCCC---ceECHHHHHHHH
Confidence 4688898886 679999999 999999877654332 3555 4676654431011 011122 369999999999
Q ss_pred HhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 88 AHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 88 ~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.++.+.++++++|+++++++++++|++.||++++||+||+|||.+|.||..
T Consensus 135 ~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vR~~ 187 (398)
T 2xdo_A 135 LNSLENDTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGGMSKVRKF 187 (398)
T ss_dssp HHTSCTTSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCTTCSCCTT
T ss_pred HhhcCCCEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCcchhHHhh
Confidence 99997678999999999999888899999999999999999999999999433
No 43
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.02 E-value=1.6e-09 Score=110.52 Aligned_cols=119 Identities=13% Similarity=0.093 Sum_probs=90.7
Q ss_pred cccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQIL 87 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L 87 (412)
+..+.++.|+++++++|+++ |+++.+.+. .. ... ... .+. .++..... ...|+.+.++|..|+++|
T Consensus 47 ~~~~r~~~l~~~~~~~l~~l--Gl~~~~~~~-~~-~~~---~~~--~~~---~~~~~~~~--~~~~~~~~i~~~~l~~~L 112 (500)
T 2qa1_A 47 TGESRGLGFTARTMEVFDQR--GILPRFGEV-ET-STQ---GHF--GGL---PIDFGVLE--GAWQAAKTVPQSVTETHL 112 (500)
T ss_dssp CCCCCSEEECHHHHHHHHTT--TCGGGGCSC-CB-CCE---EEE--TTE---EEEGGGST--TGGGCEEEEEHHHHHHHH
T ss_pred CCCCCcceECHHHHHHHHHC--CCHHHHHhc-cc-ccc---ccc--cce---ecccccCC--CCCCceeecCHHHHHHHH
Confidence 45678999999999999999 999988765 22 111 111 121 23332111 123334789999999999
Q ss_pred Hhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCc---EEEeCEEEEecCcCchhHHH
Q 015167 88 AHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQ---CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 88 ~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~---~~~adllVgADG~~S~vr~~ 140 (412)
.+.+ .+++++++++|+++++++++|+|++.+++ +++||+||||||++|.||..
T Consensus 113 ~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S~VR~~ 170 (500)
T 2qa1_A 113 EQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKA 170 (500)
T ss_dssp HHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTCHHHHH
T ss_pred HHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcchHHHHH
Confidence 9987 36899999999999999999999999886 79999999999999999544
No 44
>2brf_A Bifunctional polynucleotide phosphatase/kinase; hydrolase/transferase, FHA, forkhead-associated, PNKP, PNK, polynucleotide kinase 3' phosphatase; 1.40A {Homo sapiens} SCOP: b.26.1.2 PDB: 2w3o_A* 1yjm_A*
Probab=99.01 E-value=1.7e-09 Score=85.99 Aligned_cols=98 Identities=10% Similarity=0.238 Sum_probs=75.2
Q ss_pred CCceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--CCEEEEEEcCCcccee
Q 015167 272 NGEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--DGAFYLIDLRSEHGTY 349 (412)
Q Consensus 272 ~~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~ 349 (412)
+....|.+..+.. .+|.|+. ....++|||.+.. .|.+..+||+|+.+..+ ++.+.|.|+ ++|++|
T Consensus 7 ~~~c~L~~~~~~~---~~I~Lp~--~~g~~viGR~p~t-------~I~DkrcSR~hv~L~ad~~~~~v~vk~l-G~Np~~ 73 (110)
T 2brf_A 7 PGRLWLESPPGEA---PPIFLPS--DGQALVLGRGPLT-------QVTDRKCSRTQVELVADPETRTVAVKQL-GVNPST 73 (110)
T ss_dssp -CEEEEECSTTSS---CCEECCS--TTCCEEECSBTTT-------TBCCTTSCSSCEEEEEETTTTEEEEEEC-SSSCCE
T ss_pred CcEEEEEeCCCCC---CcEEecc--CCCCEEEcCCCCc-------ccccccceeeeEEEEEecCCCEEEEEEc-ccCCcE
Confidence 4555666666542 3787853 2588999999965 57889999999999764 578999999 579999
Q ss_pred eeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEE
Q 015167 350 ITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKV 388 (412)
Q Consensus 350 vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~ 388 (412)
+|+. +|.+++.+.|++||+|.|=.. ...|++..
T Consensus 74 vng~-----~l~k~~~~~L~~GD~leLl~g-~y~~~v~f 106 (110)
T 2brf_A 74 TGTQ-----ELKPGLEGSLGVGDTLYLVNG-LHPLTLRW 106 (110)
T ss_dssp EC-C-----BCCTTCEEEEETTCEEEEETT-EEEEEEEE
T ss_pred ECCE-----EcCCCCEEEecCCCEEEEccC-CeEEEEEe
Confidence 9998 999999999999999998554 22465555
No 45
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.94 E-value=1.9e-09 Score=107.41 Aligned_cols=100 Identities=15% Similarity=0.217 Sum_probs=75.8
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcc---------cccceEEEEEC--C---EEE
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQV---------SKMHAHIRYKD--G---AFY 338 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~v---------Sr~Ha~i~~~~--~---~~~ 338 (412)
..|..+....... ..+.+.. ..++|||.+.| +++++++.| ||+||+|.+.. + .|+
T Consensus 8 ~~~g~l~~~~~~~--~~~~l~~----~~~~iGR~~~~-----~~~~~~~~~~~~~~~~~vS~~H~~i~~~~~~~~~~~~~ 76 (419)
T 3i6u_A 8 APWARLWALQDGF--ANLECVN----DNYWFGRDKSC-----EYCFDEPLLKRTDKYRTYSKKHFRIFREVGPKNSYIAY 76 (419)
T ss_dssp CCSEEEEECSSSS--CCEEECS----SEEEEESSTTS-----SEETTCTTGGGCSGGGGSCTTCEEEECCEETTTEECCE
T ss_pred CCceEeeecCCCC--CceEecC----CCEEecCCCcc-----CEEECCcccccccccccccccceEEEEEcCCCCceEEE
Confidence 4577654333322 3455544 77999999764 699998765 99999997642 2 299
Q ss_pred EEEcCCccceeeeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 339 LIDLRSEHGTYITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 339 i~Dl~S~nGt~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|+| .|+||||||+. ++..+...+|.+||.+.||......|.+...
T Consensus 77 i~D-~S~nGt~vn~~-----~~~~~~~~~l~~~d~i~~~~~~~~~~~~~~~ 121 (419)
T 3i6u_A 77 IED-HSGNGTFVNTE-----LVGKGKRRPLNNNSEIALSLSRNKVFVFFDL 121 (419)
T ss_dssp EEE-CCSSCEEETTE-----ECCTTCEEECCTTEEEEESSTTCEEEEEEES
T ss_pred EEE-CCcCCceECcc-----cccCCCcccCCCCCEeeeeccccceEEEecc
Confidence 999 79999999998 8888889999999999999876545665544
No 46
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.94 E-value=5.3e-09 Score=109.91 Aligned_cols=128 Identities=15% Similarity=0.194 Sum_probs=92.5
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECC---CCcEEE--EEeCCCcccccCCCeEEEEeHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGI---SGSWYI--KFDTFTPAAEKGLPVTRVISRM 81 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~---~g~~l~--~~~~~~~~~~~g~~~~~~i~r~ 81 (412)
....|.++.|+++++++|+++ |+++.+.+.+.... .+ .+++.. .+.... .++..... ....+ .+.++|.
T Consensus 68 ~~~~g~a~~l~~~t~e~l~~l--Gl~~~~~~~~~~~~-~~-~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~-~~~i~q~ 141 (639)
T 2dkh_A 68 PMELGQADGIACRTMEMFEAF--EFADSILKEACWIN-DV-TFWKPDPGQPGRIARHGRVQDTEDG-LSEFP-HVILNQA 141 (639)
T ss_dssp CCSSCSCCEECHHHHHHHHHT--TCHHHHHHHSEEEC-EE-EEEEECTTSTTCEEEEEEEESSCTT-SCSSC-EEECCHH
T ss_pred CCCCCceeeeCHHHHHHHHHc--CcHHHHHHhccccc-ce-EEECCCCCCCcceEeecccCcccCC-CCCCc-eEeeCHH
Confidence 456788999999999999999 99999988766443 33 355421 243321 22221111 11223 4789999
Q ss_pred HHHHHHHhhc---C-CCEEEcCCeEEEEEEeCC----eEEEEEc------cC--cEEEeCEEEEecCcCchhHHH
Q 015167 82 TLQQILAHAV---G-NDIILNDSNVIDFMDHGD----KVSVMLE------NG--QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 82 ~L~~~L~~~l---~-~~~i~~~~~v~~i~~~~~----~v~v~~~------dG--~~~~adllVgADG~~S~vr~~ 140 (412)
.|+++|.+.+ + +++|+++++|++++++++ +++|++. +| .+++||+||||||++|.||..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~ 216 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSNVRRA 216 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHH
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchHHHHH
Confidence 9999999987 3 448999999999998763 5888886 46 479999999999999999544
No 47
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.93 E-value=4.7e-09 Score=107.95 Aligned_cols=131 Identities=21% Similarity=0.207 Sum_probs=97.3
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhccccccccee-E--EEECCCCcEEEEEeCCCc------ccccCCCeEEE
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRIN-G--LVDGISGSWYIKFDTFTP------AAEKGLPVTRV 77 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~-~--~~~~~~g~~l~~~~~~~~------~~~~g~~~~~~ 77 (412)
.+..+.++.++++++++|+++ |+++.+.+.+.+...... . ......|..+.++...-. ......+ .+.
T Consensus 40 ~~~~~~~~~l~~~~~~~l~~l--Gl~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 116 (535)
T 3ihg_A 40 LSPYPRAAGQNPRTMELLRIG--GVADEVVRADDIRGTQGDFVIRLAESVRGEILRTVSESFDDMVAATEPCTPAG-WAM 116 (535)
T ss_dssp CCCCCCSCCBCHHHHHHHHHT--TCHHHHHHSCCSSCTTSCCEEEEESSSSSCEEEEEESCHHHHHHTTGGGCSCC-CBC
T ss_pred CCCCCccceECHHHHHHHHHc--CCHHHHHhhCCCcccccceeeeEEeccCCceeeeccccccccccccccCCCCc-ccc
Confidence 345678899999999999999 999999988765432210 1 223345665553321100 0001222 268
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCC----eEEEEEccC---cEEEeCEEEEecCcCchhHHH
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGD----KVSVMLENG---QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~----~v~v~~~dG---~~~~adllVgADG~~S~vr~~ 140 (412)
++|..|.+.|.+.+ .+++++++++|++++++++ ++++++.++ .+++||+||+|||.+|.||..
T Consensus 117 i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~ 188 (535)
T 3ihg_A 117 LSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRES 188 (535)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHH
Confidence 99999999999988 4789999999999999988 999999987 789999999999999999544
No 48
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.86 E-value=1.6e-09 Score=112.23 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=92.2
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHH
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~ 86 (412)
....+.++.|+++++++|+++ |+++.+.+.+...... ++. +.....++..... ...++.+.++|..|.++
T Consensus 84 ~~~~~r~~~l~~~s~~~l~~l--Gl~~~l~~~~~~~~~~---~~~---~~~~~~~~~~~~~--~~~~~~~~i~~~~l~~~ 153 (570)
T 3fmw_A 84 PVGHDRAGALHIRTVETLDLR--GLLDRFLEGTQVAKGL---PFA---GIFTQGLDFGLVD--TRHPYTGLVPQSRTEAL 153 (570)
T ss_dssp CCCSSSCCCBCHHHHHHHHTT--TCHHHHTTSCCBCSBC---CBT---TBCTTCCBGGGSC--CSCCSBBCCCHHHHHHH
T ss_pred CCCCceEEEECHHHHHHHHHc--CChHHHHhcCcccCCc---eeC---CcccccccccccC--CCCCeeEEeCHHHHHHH
Confidence 345688999999999999999 9999998876543311 111 1100012221111 12233368999999999
Q ss_pred HHhhc--CCCEEEcCCeEEEEEEeCCeEEEEE--ccC-cEEEeCEEEEecCcCchhHHH
Q 015167 87 LAHAV--GNDIILNDSNVIDFMDHGDKVSVML--ENG-QCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 87 L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~--~dG-~~~~adllVgADG~~S~vr~~ 140 (412)
|.+.+ .+++|+++++|+++++++++++|++ .+| ++++||+||+|||++|.||..
T Consensus 154 L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~ 212 (570)
T 3fmw_A 154 LAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGRSTVRRL 212 (570)
T ss_dssp HHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSSCHHHHH
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCCchHHHH
Confidence 99987 3788999999999999999999988 678 689999999999999999544
No 49
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.85 E-value=8.1e-09 Score=101.62 Aligned_cols=121 Identities=16% Similarity=0.206 Sum_probs=89.2
Q ss_pred ccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHHH
Q 015167 9 LYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILA 88 (412)
Q Consensus 9 ~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L~ 88 (412)
..++| .|+++++++|+++ |+++.+.+.+.+.. .+ .+.+ .+.. ..+++... ..+.+ .+.++|..|.+.|.
T Consensus 42 ~~~~g-~l~~~~~~~l~~l--g~~~~~~~~~~~~~-~~-~~~~--~~~~-~~~~~~~~--~~~~~-~~~~~~~~l~~~L~ 110 (394)
T 1k0i_A 42 RIRAG-VLEQGMVDLLREA--GVDRRMARDGLVHE-GV-EIAF--AGQR-RRIDLKRL--SGGKT-VTVYGQTEVTRDLM 110 (394)
T ss_dssp CCCCC-EECHHHHHHHHHT--TCCHHHHHHCEEES-CE-EEEE--TTEE-EEECHHHH--HTSCC-EEECCHHHHHHHHH
T ss_pred CCceE-eECHHHHHHHHHc--CCcHHHHhcCCccc-eE-EEEE--CCce-EEeccccc--cCCCc-eEEechHHHHHHHH
Confidence 35566 4999999999999 99999987665433 33 3555 2322 23333211 11223 36889999999998
Q ss_pred hhc--CCCEEEcCCeEEEEEEeC-CeEEEEE-ccCc--EEEeCEEEEecCcCchhHHH
Q 015167 89 HAV--GNDIILNDSNVIDFMDHG-DKVSVML-ENGQ--CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 89 ~~l--~~~~i~~~~~v~~i~~~~-~~v~v~~-~dG~--~~~adllVgADG~~S~vr~~ 140 (412)
+.+ .+++++++++|+++++++ +++.|++ .||+ +++||+||+|||.+|.+|..
T Consensus 111 ~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~ 168 (394)
T 1k0i_A 111 EAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGFHGISRQS 168 (394)
T ss_dssp HHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCTTCSTGGG
T ss_pred HHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCCCcHHHHh
Confidence 887 478999999999998864 5678888 7887 79999999999999999543
No 50
>1yj5_C 5' polynucleotide kinase-3' phosphatase FHA domai; beta sandwich, P-loop, transferase; 2.80A {Mus musculus} SCOP: b.26.1.2
Probab=98.81 E-value=1.9e-08 Score=82.81 Aligned_cols=98 Identities=9% Similarity=0.204 Sum_probs=76.1
Q ss_pred CceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--CCEEEEEEcCCccceee
Q 015167 273 GEWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--DGAFYLIDLRSEHGTYI 350 (412)
Q Consensus 273 ~~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~v 350 (412)
+...|.+..+.. .+|.|+. ....++|||.+.. .|.+..+||+|+.+..+ ++.+.|.++| +|++||
T Consensus 8 ~~c~L~p~d~~~---~~I~Lp~--~~g~vvIGRgPet-------~ItDkRcSR~qv~L~ad~~~g~V~Vk~lG-~NP~~v 74 (143)
T 1yj5_C 8 GRLWLQSPTGGP---PPIFLPS--DGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTV 74 (143)
T ss_dssp EEEEEECCTTSC---CCEECCT--TTCEEEECSBTTT-------TBCCSSSCSSCEEEEEETTTTEEEEEECS-SSCCEE
T ss_pred CeEEEEecCCCC---CcEEecc--CCCCEEEcCCCcc-------ccccccccceeEEEEEecCCCeEEEEEcc-cCCcEE
Confidence 345566666442 3777753 2588999999964 68899999999999765 4778899995 799999
Q ss_pred eCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 351 TDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 351 n~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
|+. +|.++..+.|++||+|.|=... ..|++...
T Consensus 75 ng~-----~L~k~~~~~L~~GD~LeLl~g~-y~f~V~f~ 107 (143)
T 1yj5_C 75 GVH-----ELKPGLSGSLSLGDVLYLVNGL-YPLTLRWE 107 (143)
T ss_dssp TTE-----ECCTTCEEEECTTCEEESSSSC-SEEEEEEE
T ss_pred CCE-----EecCCCEEEecCCCEEEEecCC-ceEEEEec
Confidence 998 9999999999999999976542 24666554
No 51
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=98.77 E-value=5.2e-08 Score=85.53 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=73.9
Q ss_pred ceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEEC-----CEEEEEEcCCccce
Q 015167 274 EWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYKD-----GAFYLIDLRSEHGT 348 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~~-----~~~~i~Dl~S~nGt 348 (412)
..+|+..+.....+..+-+. -.....+|||.... +.+||.|....|++.||.|..++ +.+.|.++ +.+.|
T Consensus 68 ~PhLvnLn~Dp~ls~~l~y~--L~~g~t~VGr~~~~--~~~dI~L~G~~I~~~Hc~i~~~~~~~~~~~vtl~p~-~~a~t 142 (184)
T 4egx_A 68 TPHLVNLNEDPLMSECLLYY--IKDGITRVGREDGE--RRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPC-EGADT 142 (184)
T ss_dssp SCEEEECCCCTTCSSCSEEE--CCSEEEEEECSSSS--SCCSEECCSTTCCSEEEEEEEECCSSCSCEEEEEEC-TTCCE
T ss_pred CceEEeccCCcccCceEEEE--ECCCcCcCCCCCcC--CCCeEEECccccccccEEEEEcCCCCceEEEEEeeC-CCCeE
Confidence 35666665543322332222 12356899997532 23789999999999999998864 34888886 56789
Q ss_pred eeeCcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 349 YITDNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 349 ~vn~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
||||. ++. .++.|++||+|.||... .|+|..+
T Consensus 143 ~VNG~-----~I~--~~~~L~~GDrI~lG~~h--~Frfn~P 174 (184)
T 4egx_A 143 YVNGK-----KVT--EPSILRSGNRIIMGKSH--VFRFNHP 174 (184)
T ss_dssp EETTE-----ECC--SCEECCTTCEEEETTTE--EEEEECH
T ss_pred EEcCE-----Ecc--ccEEcCCCCEEEECCCC--EEEECCh
Confidence 99998 774 58999999999999985 5888654
No 52
>1ujx_A Polynucleotide kinase 3'-phosphatase; DNA repair, FHA domain, beta-sandwich, antiparallel beta-sheets, phosphopeptide binding motif; NMR {Mus musculus} SCOP: b.26.1.2
Probab=98.76 E-value=1e-08 Score=82.50 Aligned_cols=97 Identities=8% Similarity=0.185 Sum_probs=75.2
Q ss_pred ceEEEEcCCCCCccccEEeeccCCCCCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--CCEEEEEEcCCccceeee
Q 015167 274 EWLLVPSGSETVVSQPIYLSRSDENEPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--DGAFYLIDLRSEHGTYIT 351 (412)
Q Consensus 274 ~w~l~~~~~~~~~~~~i~l~~~~~~~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~~~~~i~Dl~S~nGt~vn 351 (412)
...|.+..+.. .+|.|+. ....++|||.+.. .|.|..+||+|+.+..+ ++.+.|.+++ +|++|||
T Consensus 16 ~c~L~~~~~~~---~~I~Lp~--~~g~~viGRgp~t-------~I~DkrcSR~qv~L~ad~~~~~v~vk~lG-~NP~~vn 82 (119)
T 1ujx_A 16 RLWLQSPTGGP---PPIFLPS--DGQALVLGRGPLT-------QVTDRKCSRNQVELIADPESRTVAVKQLG-VNPSTVG 82 (119)
T ss_dssp CEEEECCSSSC---CCCCCCT--TSCCEEESBBTTT-------TBCCTTSCTTSEEEEEETTTTEEEEEECS-SSCCBSS
T ss_pred eEEEEeCCCCC---CcEEecc--CCCCEEEcCCCCc-------ccccccccceeEEEEEecCCCEEEEEEcc-cCCcEEC
Confidence 45666666442 3666653 2488999999964 57899999999999765 4789999995 7999999
Q ss_pred CcCCceeecCCCCcEEeCCCCEEEECCCCceEEEEEEe
Q 015167 352 DNEGRRYRVSPNFPARFRPSNSIQFGSDKKATFQVKVI 389 (412)
Q Consensus 352 ~~~~~~~~l~~~~~~~l~~gd~i~~G~~~~~~f~~~~~ 389 (412)
+. +|.+++.+.|++||+|.|=... ..|++...
T Consensus 83 g~-----~l~k~~~~~L~~GD~l~Ll~g~-y~~~v~f~ 114 (119)
T 1ujx_A 83 VQ-----ELKPGLSGSLSLGDVLYLVNGL-YPLTLRWS 114 (119)
T ss_dssp SS-----BCCTTCEEEEETTCCCBCBTTB-SCCEEEEC
T ss_pred CE-----EecCCCEEEecCCCEEEEecCC-eEEEEEec
Confidence 98 9999999999999999865542 24666655
No 53
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.68 E-value=1.7e-07 Score=97.36 Aligned_cols=127 Identities=13% Similarity=0.146 Sum_probs=90.4
Q ss_pred cccccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCccc-ccCCCeEEEEeHHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAA-EKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~g~~~~~~i~r~~L~~~ 86 (412)
...+.|..+.|++.++|+.+ |+++.+.+......... .+.. ..+.....+.+..... ....++.+.++|..|.+.
T Consensus 58 ~~~~~G~~l~p~~~~~l~~l--Gl~~~l~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~ 133 (591)
T 3i3l_A 58 PRYRVGESLLPGTMSILNRL--GLQEKIDAQNYVKKPSA-TFLW-GQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKL 133 (591)
T ss_dssp SCCCCCCBCCHHHHHHHHHT--TCHHHHHHHCCEEECEE-EEEC-SSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHH
T ss_pred CCCceeeeECHHHHHHHHHc--CCcHHHHhcCCcccCCc-EEEe-cCCCccceeecccccccccccCeeEEEcHHHHHHH
Confidence 34566889999999999999 99999987665333222 1222 2222112233322111 113344578999999999
Q ss_pred HHhhc--CCCEEEcCCeEEEEEEe-CCeEEEEEc-cC--cEEEeCEEEEecCcCchhH
Q 015167 87 LAHAV--GNDIILNDSNVIDFMDH-GDKVSVMLE-NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 87 L~~~l--~~~~i~~~~~v~~i~~~-~~~v~v~~~-dG--~~~~adllVgADG~~S~vr 138 (412)
|.+.+ .+++++++++|++++.+ ++.+.|++. +| .+++||+||+|||.+|.++
T Consensus 134 L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S~lr 191 (591)
T 3i3l_A 134 LLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPIS 191 (591)
T ss_dssp HHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEEECCGGGCHHH
T ss_pred HHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEEECCCCcchhH
Confidence 99988 58999999999999876 556778887 67 5799999999999999993
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.66 E-value=2.5e-07 Score=91.62 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=92.2
Q ss_pred cccceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHHHh
Q 015167 10 YRGPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAH 89 (412)
Q Consensus 10 ~Gagi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L~~ 89 (412)
.+.|..+.++++++|+++ |+++.+.+.+......+ .+.. +.....+++...... +.+..+.++|..|.+.|.+
T Consensus 42 ~~~g~~~~~~~~~~l~~~--g~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~L~~ 114 (421)
T 3nix_A 42 FVIGESLLPRCMEHLDEA--GFLDAVKAQGFQQKFGA-KFVR---GKEIADFNFSDQFSN-GWNWTWQVPRGNFDKTLAD 114 (421)
T ss_dssp CCSCCBCCGGGHHHHHHT--TCHHHHHHTTCEEECEE-EEEE---TTEEEEEETTSCSSC-SCCCEEECCHHHHHHHHHH
T ss_pred CcccCcccHhHHHHHHHc--CChHHHHHcCCcccCCc-EEEe---CCeeEEEeehhhcCC-CCCceeEECHHHHHHHHHH
Confidence 367888999999999999 99999988765443333 2433 233344555432211 2223478999999999999
Q ss_pred hc--CCCEEEcCCeEEEEEEeCCeE--EEEEccCc--EEEeCEEEEecCcCchhHHH
Q 015167 90 AV--GNDIILNDSNVIDFMDHGDKV--SVMLENGQ--CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 90 ~l--~~~~i~~~~~v~~i~~~~~~v--~v~~~dG~--~~~adllVgADG~~S~vr~~ 140 (412)
.+ .+++++++++|++++.+++++ .+...+|+ +++||+||+|||.+|.++..
T Consensus 115 ~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~ 171 (421)
T 3nix_A 115 EAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASGYGRVIPRM 171 (421)
T ss_dssp HHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHH
T ss_pred HHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHh
Confidence 87 478999999999999988775 45557888 69999999999999988433
No 55
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.55 E-value=4.7e-07 Score=92.50 Aligned_cols=126 Identities=14% Similarity=0.167 Sum_probs=87.9
Q ss_pred ccccceeeCHHHHH-HHHHcccChHHHHHhcccccccceeEEEECCCCc-EEEEEeCCCcccccCCCeEEEEeHHHHHHH
Q 015167 9 LYRGPIQIQSNALA-ALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGS-WYIKFDTFTPAAEKGLPVTRVISRMTLQQI 86 (412)
Q Consensus 9 ~~Gagi~l~~~~~~-~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~-~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~ 86 (412)
..+.|..+.+++.+ +|+.+ |+++.+.+......... .+..+.... ....+.... . ...++.+.++|..|.+.
T Consensus 43 ~~~~g~~~~~~~~~~~l~~l--gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~v~r~~l~~~ 116 (512)
T 3e1t_A 43 RHQIGESLLPATVHGICAML--GLTDEMKRAGFPIKRGG-TFRWGKEPEPWTFGFTRHP--D-DPYGFAYQVERARFDDM 116 (512)
T ss_dssp CCCSCCBCCHHHHTTHHHHT--TCHHHHHTTTCCEECEE-EEECSSCSSCEEEESSSSS--S-STTCCEEBCCHHHHHHH
T ss_pred CCCCCcccCcchHHHHHHHh--CcHHHHHHcCCccccCc-eEEecCCccccccccccCC--C-CCcceeeEecHHHHHHH
Confidence 45677888998876 89999 99999987765433221 122211111 112222211 1 12223478999999999
Q ss_pred HHhhc--CCCEEEcCCeEEEEEEeCCe---EEEEEccCc--EEEeCEEEEecCcCchhHHH
Q 015167 87 LAHAV--GNDIILNDSNVIDFMDHGDK---VSVMLENGQ--CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 87 L~~~l--~~~~i~~~~~v~~i~~~~~~---v~v~~~dG~--~~~adllVgADG~~S~vr~~ 140 (412)
|.+.+ .+++++++++|++++.++++ |++...||+ +++||+||+|||.+|.++..
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~vr~~ 177 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTRVSQA 177 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCSSGGG
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchHHHHH
Confidence 99987 58999999999999998875 445556785 79999999999999999543
No 56
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=98.42 E-value=2.3e-07 Score=84.98 Aligned_cols=65 Identities=17% Similarity=0.168 Sum_probs=54.0
Q ss_pred CCEEecCCCCCCCCceeEEeCCCcccccceEEEEE--C--CEEEEEEcCCccce-eeeCcCCceeecCCCCcEEeC-CCC
Q 015167 299 EPYLIGSESQEDFPRTSIVIPSAQVSKMHAHIRYK--D--GAFYLIDLRSEHGT-YITDNEGRRYRVSPNFPARFR-PSN 372 (412)
Q Consensus 299 ~~~~iGR~~~~~~~~~~~~i~~~~vSr~Ha~i~~~--~--~~~~i~Dl~S~nGt-~vn~~~~~~~~l~~~~~~~l~-~gd 372 (412)
..++|||.+.+ +++|++. + ||.+... + +.|+|+|++|+||| ||||. ++. ....|+ .||
T Consensus 92 ~~itIG~~~~~-----dI~l~~~-~---~~~~~~~~~~~~~~~~l~~l~s~ngtvyvNg~-----~i~--~~~~L~~~GD 155 (238)
T 1wv3_A 92 DTMTIGPNAYD-----DMVIQSL-M---NAIIIKDFQSIQESQYVRIVHDKNTDVYINYE-----LQE--QLTNKAYIGD 155 (238)
T ss_dssp SEEEEESSTTS-----SEECTTC-S---SCEEEECGGGHHHHCEEEEECCTTCCEEETTE-----ECC--SSEEEEETTC
T ss_pred ceEEEeCCCCC-----eEEeCCC-e---eEEEEecccCcCCcEEEEEccCCCCCEEECCE-----Eec--cceeccCCcC
Confidence 38999998775 5999887 3 6877777 3 58999999999996 99998 764 357899 999
Q ss_pred EEEECCC
Q 015167 373 SIQFGSD 379 (412)
Q Consensus 373 ~i~~G~~ 379 (412)
.|.||..
T Consensus 156 ~I~ig~~ 162 (238)
T 1wv3_A 156 HIYVEGI 162 (238)
T ss_dssp EEEETTE
T ss_pred EEEECCE
Confidence 9999875
No 57
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.38 E-value=2.3e-06 Score=87.58 Aligned_cols=127 Identities=10% Similarity=0.088 Sum_probs=86.1
Q ss_pred CcccccceeeCHHHHHHHHHcccChHHH--HHhcccccccceeEEEECCC------CcEE-EEEeCC------Ccc----
Q 015167 7 EGLYRGPIQIQSNALAALEAIDLDVAEE--VMRAGCVTGDRINGLVDGIS------GSWY-IKFDTF------TPA---- 67 (412)
Q Consensus 7 ~~~~Gagi~l~~~~~~~L~~l~~Gl~~~--l~~~~~~~~~~~~~~~~~~~------g~~l-~~~~~~------~~~---- 67 (412)
...+|.|.++.|+++++|+++ |+++. +.+........+ .+.++.. +... ..+... ...
T Consensus 53 ~~~~g~g~~~~p~~~~~l~~l--Gi~e~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 129 (526)
T 2pyx_A 53 VATIGVGEGTWPSMRSTLSKI--GIDENDFIRQCDASFKQGS-RFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWL 129 (526)
T ss_dssp CCCCCSCEECCTHHHHHHHHH--TCCHHHHHHHTTCEEECEE-EEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHG
T ss_pred CCCcceeeechHhHHHHHHHc--CCCHHHHHHHcCCEEECCC-cccCCCccccCCCCCceecCCCCCCCCCCCChhHHHH
Confidence 345777899999999999999 99886 565543322223 3443322 1221 111100 000
Q ss_pred ------------------------------cc--cCCCeEEEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCe-
Q 015167 68 ------------------------------AE--KGLPVTRVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDK- 111 (412)
Q Consensus 68 ------------------------------~~--~g~~~~~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~- 111 (412)
.. ...++.+.++|..|.+.|.+.+ .+++++++ +|++++.++++
T Consensus 130 ~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~ 208 (526)
T 2pyx_A 130 PHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGD 208 (526)
T ss_dssp GGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSC
T ss_pred hhhhccCchhhcccccchhhhccchhhhhccccCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCc
Confidence 00 0122347899999999999887 37889999 69999887554
Q ss_pred -EEEEEccCcEEEeCEEEEecCcCchh
Q 015167 112 -VSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 112 -v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+.|++.+|++++||+||+|||.+|.+
T Consensus 209 ~~~v~~~~g~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 209 IEKLITKQNGEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp EEEEEESSSCEEECSEEEECSGGGCCC
T ss_pred EEEEEECCCCEEEcCEEEECCCcchHH
Confidence 46788888889999999999999998
No 58
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.35 E-value=2.6e-06 Score=86.78 Aligned_cols=64 Identities=14% Similarity=0.139 Sum_probs=56.2
Q ss_pred CeEEEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe--EEEEEccCcEEEeCEEEEecCcCchh
Q 015167 73 PVTRVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDK--VSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 73 ~~~~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~--v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++.+.++|..|.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 165 ~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp SCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCC
T ss_pred CeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHH
Confidence 3357899999999999987 57899999 99999986655 67888999899999999999999999
No 59
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.23 E-value=1.5e-06 Score=85.06 Aligned_cols=110 Identities=15% Similarity=0.128 Sum_probs=73.1
Q ss_pred HHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHHHhhc--CCCEEEc
Q 015167 21 LAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAHAV--GNDIILN 98 (412)
Q Consensus 21 ~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L~~~l--~~~~i~~ 98 (412)
.++|+.+ |+++.......... .+ .+.+ ..+.....++.... +.++.+.++|..|.+.|.+.+ .++++++
T Consensus 51 ~~~~~~l--g~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~ 121 (397)
T 3cgv_A 51 KGILNEA--DIKADRSFIANEVK-GA-RIYG-PSEKRPIILQSEKA----GNEVGYVLERDKFDKHLAALAAKAGADVWV 121 (397)
T ss_dssp THHHHHT--TCCCCTTTEEEEES-EE-EEEC-TTCSSCEEEC---------CCCEEEECHHHHHHHHHHHHHHHTCEEES
T ss_pred HHHHHHc--CCCCChHHhhhhcc-eE-EEEc-CCCCEEEEEecccc----CCceeEEEeHHHHHHHHHHHHHhCCCEEEE
Confidence 3678888 77544222121111 22 3444 23433123333211 123357999999999999987 4789999
Q ss_pred CCeEEEEEEeCCeEE-EEEc---cCcEEEeCEEEEecCcCchhHH
Q 015167 99 DSNVIDFMDHGDKVS-VMLE---NGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 99 ~~~v~~i~~~~~~v~-v~~~---dG~~~~adllVgADG~~S~vr~ 139 (412)
+++|++++.+++++. |++. ++.+++||+||+|||.+|.++.
T Consensus 122 ~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~ 166 (397)
T 3cgv_A 122 KSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGR 166 (397)
T ss_dssp SCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHH
T ss_pred CCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchHhHH
Confidence 999999999888876 7773 5568999999999999998843
No 60
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.22 E-value=2.3e-06 Score=83.30 Aligned_cols=64 Identities=19% Similarity=0.234 Sum_probs=53.4
Q ss_pred EEEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEE--ccCc--EEEeCEEEEecCcCchhH
Q 015167 75 TRVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVML--ENGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 75 ~~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~--~dG~--~~~adllVgADG~~S~vr 138 (412)
.+.++|..|.+.|.+.+ .+++++++++++++..+++.+.... .+++ +++||+||||||++|.|+
T Consensus 96 ~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr 165 (397)
T 3oz2_A 96 GYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESEFG 165 (397)
T ss_dssp EEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCHHH
T ss_pred eEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCccccHHH
Confidence 47999999999999987 4789999999999999888765332 2333 589999999999999994
No 61
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.18 E-value=8e-06 Score=84.11 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=56.0
Q ss_pred CeEEEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCe--EEEEEccCcEEEeCEEEEecCcCchh
Q 015167 73 PVTRVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDK--VSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 73 ~~~~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~--v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++.+.++|..|.+.|.+.+ ++++++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 186 ~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 186 NYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCC
T ss_pred CcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhh
Confidence 3347899999999999987 38899999 99999886554 67888899899999999999999998
No 62
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.15 E-value=3.7e-06 Score=84.39 Aligned_cols=64 Identities=13% Similarity=0.040 Sum_probs=55.8
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEc---cCc--EEEeCEEEEecCcCchhHH
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLE---NGQ--CYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~---dG~--~~~adllVgADG~~S~vr~ 139 (412)
+.++|..|.+.|.+.+ .+++++++++|++++.+++++. |++. +|+ +++||+||+|||.+|.++.
T Consensus 95 ~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr~ 166 (453)
T 3atr_A 95 FELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFRS 166 (453)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTGG
T ss_pred EEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhHH
Confidence 6899999999999987 5789999999999999888765 6654 676 7999999999999999943
No 63
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.10 E-value=1.5e-05 Score=81.69 Aligned_cols=64 Identities=11% Similarity=0.184 Sum_probs=55.7
Q ss_pred CeEEEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe--EEEEEccCcEEEeCEEEEecCcCchh
Q 015167 73 PVTRVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDK--VSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 73 ~~~~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~--v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++.+.++|..|.+.|.+.+ .+++++++ +|++++.++++ +.|++.+|++++||+||+|||.+|.+
T Consensus 157 ~~~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 157 SHAWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCC
T ss_pred CccEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhh
Confidence 3357899999999999987 47889999 89999886554 57888899899999999999999999
No 64
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.65 E-value=0.00013 Score=75.64 Aligned_cols=67 Identities=15% Similarity=0.158 Sum_probs=55.5
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEE-EEEc------cC---------cEEEeCEEEEecCcCch
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVS-VMLE------NG---------QCYAGDVLVGADGIWSK 136 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~-v~~~------dG---------~~~~adllVgADG~~S~ 136 (412)
+.++|..|.+.|.+.+ .+++|+++++|+++..+++ .+. |++. || .+++||+||+|||.+|.
T Consensus 139 ~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 139 YVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred EEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 6899999999999987 4789999999999998764 454 7665 33 68999999999999999
Q ss_pred h-HHHHh
Q 015167 137 M-NLLMS 142 (412)
Q Consensus 137 v-r~~~~ 142 (412)
+ +.++.
T Consensus 219 vr~~l~~ 225 (584)
T 2gmh_A 219 LAKQLYK 225 (584)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9 55533
No 65
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.60 E-value=8.1e-06 Score=79.87 Aligned_cols=106 Identities=12% Similarity=0.002 Sum_probs=72.8
Q ss_pred cccccceeeCHHHHHHHHHcccChH-HH-HHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHH
Q 015167 8 GLYRGPIQIQSNALAALEAIDLDVA-EE-VMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQ 85 (412)
Q Consensus 8 ~~~Gagi~l~~~~~~~L~~l~~Gl~-~~-l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~ 85 (412)
.+.|+++.+++++++. .++++++ +. +........ .+ .+.+ .|..+ .. ..+.++ +.++|..|.+
T Consensus 38 ~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~-~~~~--~g~~~---~~-----~~~~~~-~~~~r~~l~~ 102 (381)
T 3c4a_A 38 EVLGWGVVLPGRPGQH--PANPLSYLDAPERLNPQFLE-DF-KLVH--HNEPS---LM-----STGVLL-CGVERRGLVH 102 (381)
T ss_dssp CCCCSEEEEESCTTTC--TTCGGGGSSCGGGGCCEEEC-CE-EEEE--SSSEE---EC-----CCCSCE-EEEEHHHHHH
T ss_pred CcceeEEEeCcHHHHh--hcCcchhhhhhHHHhhcccc-ce-EEEe--CCeeE---Ee-----cCCCce-eeecHHHHHH
Confidence 4569999999999883 3333666 54 444333222 23 3454 34433 11 124453 6899999999
Q ss_pred HHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 86 ILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 86 ~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.|.+.+ .+++++++++|+++++. ++++||+||+|||++|. |..
T Consensus 103 ~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~~ 147 (381)
T 3c4a_A 103 ALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TAH 147 (381)
T ss_dssp HHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TCC
T ss_pred HHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HHh
Confidence 999988 37899999999888642 13689999999999999 854
No 66
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.81 E-value=0.0017 Score=61.52 Aligned_cols=58 Identities=9% Similarity=0.037 Sum_probs=47.7
Q ss_pred HHHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEE-eCEEEEecCcCchhHHH
Q 015167 80 RMTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYA-GDVLVGADGIWSKMNLL 140 (412)
Q Consensus 80 r~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~-adllVgADG~~S~vr~~ 140 (412)
...|.+.|.+ +++++++++|++++.++++++|++++|+... +|+||+|||.+|.++++
T Consensus 109 ~~~l~~~l~~---g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 109 MSAITRAMRG---DMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp THHHHHHHHT---TCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEEEECSCHHHHGGGG
T ss_pred HHHHHHHHHc---cCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEEEEcCCHHHHHHhh
Confidence 3445555554 5579999999999999899999999998764 99999999999998654
No 67
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=96.76 E-value=0.001 Score=67.42 Aligned_cols=64 Identities=22% Similarity=0.076 Sum_probs=52.9
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEe---CCeEEEEE--c-cC--cEEEeCEEEEecCcCchhHH
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDH---GDKVSVML--E-NG--QCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~---~~~v~v~~--~-dG--~~~~adllVgADG~~S~vr~ 139 (412)
..+++..|.+.|.+.+ .+++++++++|++++.+ ++.+.|++ . +| .+++||+||+|||.+|.++.
T Consensus 161 ~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~ 234 (497)
T 2bry_A 161 DHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEG 234 (497)
T ss_dssp CEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTT
T ss_pred ccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccccc
Confidence 3588999999999887 57899999999999875 34567777 4 56 47999999999999999953
No 68
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=96.60 E-value=0.0038 Score=61.75 Aligned_cols=59 Identities=15% Similarity=0.073 Sum_probs=51.5
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
...+..+.+.|.+.+ .+++++++++|++++.+++++.|++.+| +++||.||.|+|.+|.
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEESEEEECCCCSSC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEeeEEEECCCCccC
Confidence 345678888888877 3789999999999999888899998888 8999999999999993
No 69
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.50 E-value=0.0044 Score=53.18 Aligned_cols=58 Identities=17% Similarity=0.038 Sum_probs=50.2
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+....+.+.|.+.+ .+++++++ +|++++.+++++.+++++| ++.+|+||.|+|.+|.+
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHH
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCc
Confidence 55778888888777 47899999 9999998877788888888 89999999999999977
No 70
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.40 E-value=0.0068 Score=60.33 Aligned_cols=56 Identities=18% Similarity=0.117 Sum_probs=48.9
Q ss_pred HHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEEccCcEEEeCEEEEecCcCc
Q 015167 80 RMTLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 80 r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~~dG~~~~adllVgADG~~S 135 (412)
...+.+.|.+.+ .+++++++++|+++..++++ +.|++.+|++++||.||.|+|.+|
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEEEECCCCCc
Confidence 567778888777 57899999999999987777 678888998899999999999999
No 71
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.34 E-value=0.0057 Score=62.65 Aligned_cols=60 Identities=18% Similarity=0.152 Sum_probs=50.4
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~v 137 (412)
.....+.+.|.+.+ .+++++++++|++++.+++++. |++.+|++++||+||.|||.+|.-
T Consensus 217 ~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~~ 279 (549)
T 3nlc_A 217 FKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSARD 279 (549)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCHH
T ss_pred chHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhh
Confidence 34567777777776 4789999999999998877654 889999999999999999999963
No 72
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=96.30 E-value=0.0098 Score=57.79 Aligned_cols=59 Identities=20% Similarity=0.244 Sum_probs=49.7
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++...+.+.|.+.+ .+++++++++|++++.+++++.|+..+| +++||.||.|+|.+|.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~ 209 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTN 209 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChH
Confidence 567778888888876 4789999999999999888888877665 7999999999999854
No 73
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.28 E-value=0.01 Score=58.46 Aligned_cols=60 Identities=8% Similarity=0.077 Sum_probs=53.1
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCC---eEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDS---NVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~---~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++...+.+.|.+.+ .++++++++ +|+++..++++++ |++.+|++++||.||.|.|.+|.
T Consensus 157 ~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 157 WAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 566778888888877 478999999 9999999888888 99999989999999999999985
No 74
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.24 E-value=0.0094 Score=56.84 Aligned_cols=61 Identities=10% Similarity=0.105 Sum_probs=52.4
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
.++...|.+.|.+.+ .+++++++++|++++.++++ +.|++.+| .+++||.||.|+|.+|.-
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~ 211 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPG 211 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHH
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHH
Confidence 577888888888887 47899999999999988766 88888888 489999999999999853
No 75
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.17 E-value=0.0091 Score=53.75 Aligned_cols=61 Identities=15% Similarity=0.146 Sum_probs=49.8
Q ss_pred eHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 79 SRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 79 ~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
++..+.+.|.+.+ ++++++ +++|++++.+++++ .|.+.+|++++||+||.|+|.+|..+..
T Consensus 66 ~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~ 130 (232)
T 2cul_A 66 RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLF 130 (232)
T ss_dssp CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEE
T ss_pred CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhcee
Confidence 5678888888777 367777 67999999887775 5788899899999999999999987533
No 76
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.94 E-value=0.018 Score=60.43 Aligned_cols=62 Identities=15% Similarity=0.047 Sum_probs=54.9
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..++...|.+.|.+.+ .+++++++++|++++.+++++.|++.+|.++.||.||.|.|.+|.-
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~ 475 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISR 475 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGC
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhc
Confidence 3577888889998877 4789999999999999999999999898899999999999999863
No 77
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.76 E-value=0.018 Score=55.41 Aligned_cols=60 Identities=15% Similarity=0.281 Sum_probs=51.2
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~v 137 (412)
.++...+.+.|.+.+ .+++++++++|++++.+++++. |+..+| +++||.||.|+|.+|..
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~ 207 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANL 207 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHH
Confidence 467888888888877 4789999999999998888877 887777 89999999999999853
No 78
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=95.68 E-value=0.021 Score=55.08 Aligned_cols=59 Identities=24% Similarity=0.350 Sum_probs=50.2
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++...+.+.|.+.+ .+++++++++|++++.+++++.|+..+| +++||.||.|+|.+|.
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHH
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHH
Confidence 567788888888877 4789999999999998877888887665 7999999999999875
No 79
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=95.66 E-value=0.016 Score=55.67 Aligned_cols=61 Identities=21% Similarity=0.341 Sum_probs=52.7
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..++...+...|.+.+ .+++++++++|++++.+++++.|+..+| +++||.||.|.|.+|.-
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~ 211 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDA 211 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHH
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHH
Confidence 3577888888888877 4789999999999999888888888777 89999999999999854
No 80
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=95.60 E-value=0.027 Score=53.98 Aligned_cols=59 Identities=15% Similarity=0.242 Sum_probs=50.0
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++...+.+.|.+.+ .+++++++++|++++.+++++.|+..+|+ ++||.||.|.|.+|.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g~-~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADGE-YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSCE-EEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCCe-EEcCEEEEcCCccHH
Confidence 566778888888876 47899999999999988777888887774 999999999999874
No 81
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.50 E-value=0.013 Score=56.51 Aligned_cols=59 Identities=17% Similarity=0.255 Sum_probs=51.0
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++...|.+.|.+.+ .+++++++++|++++.+++++.|+..+| +++||.||.|+|.+|.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHH
Confidence 567788888888887 4789999999999998877788887777 8999999999999986
No 82
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.40 E-value=0.043 Score=50.87 Aligned_cols=59 Identities=14% Similarity=0.220 Sum_probs=47.4
Q ss_pred eHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeE-EEEEc---------cC-----cEEEeCEEEEecCcCchh
Q 015167 79 SRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKV-SVMLE---------NG-----QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 79 ~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v-~v~~~---------dG-----~~~~adllVgADG~~S~v 137 (412)
++..+...|.+.+ .+++++++++|+++..+++.+ .+.+. +| .+++||+||.|+|.+|.+
T Consensus 117 ~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~ 193 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPF 193 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTT
T ss_pred CHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHH
Confidence 7888888888776 478999999999999887754 24332 32 579999999999999988
No 83
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=95.24 E-value=0.011 Score=57.97 Aligned_cols=60 Identities=13% Similarity=0.057 Sum_probs=44.9
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEE---------EEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVI---------DFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~---------~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
..++...|.+.|.+.+ .+++++++++|+ +++.+++++.|...+| +++||.||.|+|.+|.
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~ 237 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGP 237 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHH
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHH
Confidence 3678888999998887 478899999999 8877766776666666 8999999999999984
No 84
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.22 E-value=0.031 Score=58.81 Aligned_cols=61 Identities=8% Similarity=-0.007 Sum_probs=52.7
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCc-EEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQ-CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~-~~~adllVgADG~~S~v 137 (412)
.++...|.+.|.+.+ .+++++++++|++++.+++++.|++.+|. +++||.||.|.|.+|.-
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~ 471 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPE 471 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTC
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhc
Confidence 567788888888877 47899999999999998888989998887 89999999999999763
No 85
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=95.22 E-value=0.033 Score=52.59 Aligned_cols=59 Identities=17% Similarity=0.259 Sum_probs=50.0
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~v 137 (412)
..+..+.+.|.+.+ .++.++++++|++++.+++.+. |++++| ++++|.||.|+|.+|.-
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~~ 134 (357)
T 4a9w_A 73 PARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGEA 134 (357)
T ss_dssp CBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGGB
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCCC
Confidence 56788888887765 3677999999999999988888 888887 89999999999998753
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=95.21 E-value=0.028 Score=55.75 Aligned_cols=61 Identities=16% Similarity=0.098 Sum_probs=50.0
Q ss_pred EEeHHHHHHHHHhhcC--CCEEEcCCeEEEEEEeCCeEEEEEcc---Cc---EEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAVG--NDIILNDSNVIDFMDHGDKVSVMLEN---GQ---CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l~--~~~i~~~~~v~~i~~~~~~v~v~~~d---G~---~~~adllVgADG~~S~v 137 (412)
.+++..+.+.|.+.+. ...++++++|++++..++++.|++.+ |+ ++.+|.||.|+|.+|.-
T Consensus 111 ~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 111 FPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp SCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred CCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 3568888888877652 45688999999999888888888876 76 79999999999998754
No 87
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.13 E-value=0.031 Score=54.81 Aligned_cols=57 Identities=16% Similarity=0.084 Sum_probs=47.3
Q ss_pred eHHHHHHHHHhhc--CCCEEEcCCeEEEEEEe----CCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 79 SRMTLQQILAHAV--GNDIILNDSNVIDFMDH----GDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 79 ~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~----~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
....+.+.|.+.+ .+++++++++|+++..+ ++++.|+..+| +++||.||.|+|.+|.
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEESEEEECCCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECCEEEECCCCccC
Confidence 5677777777776 37899999999999876 56688887776 7999999999999993
No 88
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=95.08 E-value=0.058 Score=51.46 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=51.1
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+.+..+.+.|.+.+ .++.++++++|++++.+++ .+.|++.+|+++.+|.||.|+|.+|..
T Consensus 71 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~ 133 (360)
T 3ab1_A 71 VPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFE 133 (360)
T ss_dssp EEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCC
T ss_pred CCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCC
Confidence 66788888887776 3678899999999998765 678889999899999999999998865
No 89
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=94.90 E-value=0.054 Score=50.34 Aligned_cols=60 Identities=15% Similarity=0.124 Sum_probs=50.6
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+.+.|.+.+ .++++++ .++++++.+++.+.+++.+|+++++|.||.|+|.+|..
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 116 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKR 116 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCC
Confidence 477888888887766 3678887 78999998888888888999999999999999988765
No 90
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=94.65 E-value=0.093 Score=49.30 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=50.4
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+.+..+.+.|.+.+ .++.++++++|+.++.+++.+.|++.+|+++.+|.||.|+|.+|..
T Consensus 62 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 62 VYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp EEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEE
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCC
Confidence 56777777777766 2578889999999998877888888889899999999999998755
No 91
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=94.60 E-value=0.08 Score=53.98 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=50.9
Q ss_pred EEeHHHHHHHHHhhc--CCC--EEEcCCeEEEEEEeCC--eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GND--IILNDSNVIDFMDHGD--KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~--~i~~~~~v~~i~~~~~--~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
...+..+.+.|.+.+ -++ .++++++|++++.+++ .+.|++++|+++++|.||.|+|..|.-
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSAI 149 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCSB
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccccC
Confidence 467888888887765 234 6899999999998765 788999999999999999999987754
No 92
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.57 E-value=0.082 Score=51.14 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=48.4
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
.+.+.|.+.+ .+++++++++|++++.+++++.+++.||+++.+|+||.|.|.++...+
T Consensus 188 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l 247 (384)
T 2v3a_A 188 AAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTEL 247 (384)
T ss_dssp HHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHH
Confidence 4455555555 478999999999999888888899999999999999999999887653
No 93
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=94.49 E-value=0.082 Score=54.84 Aligned_cols=62 Identities=18% Similarity=0.177 Sum_probs=52.4
Q ss_pred EEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchhH
Q 015167 76 RVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~vr 138 (412)
..++|..+...|.+.+ ++++++ ..+|+++..+++.+. |.+.+|.+++||.||.|+|.+|...
T Consensus 112 ~~~Dr~~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~~~ 177 (641)
T 3cp8_A 112 AQADKTQYSLYMRRIVEHEPNIDLL-QDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLNGL 177 (641)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBTCE
T ss_pred hhcCHHHHHHHHHHHHHhCCCCEEE-eeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCCcc
Confidence 4789999999998887 477774 568999988888876 8888999999999999999998764
No 94
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=94.40 E-value=0.062 Score=51.98 Aligned_cols=59 Identities=17% Similarity=0.180 Sum_probs=47.9
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEEccCcEEEeCEEEEecCcCch
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.++-..+.+.|.+.+ .+++++++++|++++.++++ +.|+..+| +++||.||.|+|.+|.
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 231 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSS 231 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHH
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHH
Confidence 345567777787776 47899999999999987765 45777777 7999999999999984
No 95
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=94.29 E-value=0.085 Score=54.05 Aligned_cols=69 Identities=13% Similarity=0.095 Sum_probs=51.9
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC-CeEE-EEE--ccCc--EEEeCEEEEecCcCchhHHHHhhhhc
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHG-DKVS-VML--ENGQ--CYAGDVLVGADGIWSKMNLLMSWLLC 146 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~-~~v~-v~~--~dG~--~~~adllVgADG~~S~vr~~~~~~~~ 146 (412)
+....|.+.|.+.+ .+++++++++|+++..++ ++|. |.+ .+|+ ++.||.||.|+|..|..+.++..+.|
T Consensus 247 ~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~~~~~p 323 (566)
T 1qo8_A 247 SSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMIAYYRP 323 (566)
T ss_dssp CHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHHHHHCG
T ss_pred CCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHHHHhCc
Confidence 44677888888877 478999999999999877 6543 444 3776 68999999999999998544343433
No 96
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.96 E-value=0.092 Score=52.08 Aligned_cols=57 Identities=16% Similarity=0.144 Sum_probs=47.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.+++++.++++||+++.+|+||.|.|.++.+.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~ 267 (455)
T 2yqu_A 209 EVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTE 267 (455)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCC
Confidence 4455555555 37899999999999988888888898999999999999999988763
No 97
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=93.94 E-value=0.056 Score=50.78 Aligned_cols=59 Identities=14% Similarity=0.111 Sum_probs=48.5
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+...|.+.+ .++++++++ +++++.+++.++|++ +|.++++|.||.|+|.+|..
T Consensus 66 ~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 66 GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKR 126 (333)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCC
Confidence 467888888887776 468888886 889988777777777 88899999999999998755
No 98
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=93.91 E-value=0.11 Score=54.09 Aligned_cols=62 Identities=19% Similarity=0.238 Sum_probs=51.5
Q ss_pred EEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhH
Q 015167 76 RVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
..+++..+.+.|.+.+ +++++ ++.+|+++..+++.+ .|.+.+|.+++||.||.|+|.+|..+
T Consensus 119 ~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~~~ 184 (651)
T 3ces_A 119 AQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLDGK 184 (651)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTCCE
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCccCc
Confidence 4688988988888877 46777 578999998877765 57888998999999999999998764
No 99
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=93.90 E-value=0.15 Score=48.69 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=47.7
Q ss_pred EEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCC-------------------e---EEEEEc------------c
Q 015167 76 RVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGD-------------------K---VSVMLE------------N 118 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~-------------------~---v~v~~~------------d 118 (412)
...+..++.+.|.+.+ ++++++++++++++..+++ . |.+... +
T Consensus 155 ~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d 234 (344)
T 3jsk_A 155 VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMD 234 (344)
T ss_dssp EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCB
T ss_pred EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccC
Confidence 3445788888888876 5789999999999987652 2 223221 2
Q ss_pred CcEEEeCEEEEecCcCchh-HHH
Q 015167 119 GQCYAGDVLVGADGIWSKM-NLL 140 (412)
Q Consensus 119 G~~~~adllVgADG~~S~v-r~~ 140 (412)
..+++|++||.|+|..|.+ +.+
T Consensus 235 ~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 235 PNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp CEEEECSEEEECCCSSSSSSCHH
T ss_pred ceEEEcCEEEECCCCCchhhHHH
Confidence 3479999999999999998 444
No 100
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=93.86 E-value=0.091 Score=53.50 Aligned_cols=60 Identities=15% Similarity=0.056 Sum_probs=48.2
Q ss_pred EeHHHHHHHHHhhc---C-CCEEEcCCeEEEEEEeCC--eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV---G-NDIILNDSNVIDFMDHGD--KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l---~-~~~i~~~~~v~~i~~~~~--~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..+..+.+.|...+ . ...++++++|++++.+++ .++|++++|++++||.||.|+|.+|.-
T Consensus 91 ~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 91 ASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp CBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 56777777775543 2 356889999999987754 678999999999999999999998755
No 101
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=93.50 E-value=0.14 Score=50.50 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=49.4
Q ss_pred HHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 82 TLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 82 ~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.|.+.|.+.++.+.|+++++|++++.+++++.|++++|++++||.||.|=......+++
T Consensus 236 ~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 236 TLVEEIEKQLKLTKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKAAAGML 294 (470)
T ss_dssp HHHHHHHHTCCSEEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHHHHHHc
Confidence 67777777775478999999999999888899999999999999999998876544543
No 102
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=93.32 E-value=0.2 Score=51.32 Aligned_cols=62 Identities=16% Similarity=0.171 Sum_probs=48.0
Q ss_pred eHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC-CeEE-EEEc--cCc--EEEeCEEEEecCcCchhHHH
Q 015167 79 SRMTLQQILAHAV--GNDIILNDSNVIDFMDHG-DKVS-VMLE--NGQ--CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 79 ~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~-~~v~-v~~~--dG~--~~~adllVgADG~~S~vr~~ 140 (412)
....|.+.|.+.+ .+++++++++|+++..++ ++|. |.+. +|+ ++.||.||.|+|..|..+.+
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~ 322 (571)
T 1y0p_A 253 VGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNER 322 (571)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred CHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHH
Confidence 3567788888777 478999999999999876 5443 4443 676 68999999999999987433
No 103
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=93.25 E-value=0.18 Score=50.66 Aligned_cols=61 Identities=21% Similarity=0.231 Sum_probs=50.7
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc---cCc--EEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE---NGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~---dG~--~~~adllVgADG~~S~v 137 (412)
.++...|...|.+.+ .+++++++++|++++.+++.+.|++. +|+ +++||.||.|+|.+|.-
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~ 212 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQ 212 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHH
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHH
Confidence 478888988888877 47899999999999988766667764 565 79999999999999864
No 104
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=93.21 E-value=0.14 Score=48.42 Aligned_cols=52 Identities=13% Similarity=0.039 Sum_probs=43.4
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCc
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGI 133 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~ 133 (412)
..|.+.|.+.+ +++|+++++|++++.++++++|++++|+++++|.||.|=..
T Consensus 112 ~~l~~~l~~~~-g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 112 SSIIKHYLKES-GAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp THHHHHHHHHH-TCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred HHHHHHHHHhc-CCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 34556666666 67899999999999988899999999988999999999644
No 105
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=93.09 E-value=0.19 Score=52.06 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=52.6
Q ss_pred EEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 76 RVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
..+++..+.+.|.+.+ +++++ ++.+|+++..+++.+ .|.+.+|.++.||.||.|+|.+|..+.+
T Consensus 118 ~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 118 AQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp EEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBTCEEE
T ss_pred hhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCccCcee
Confidence 4678999999888877 46777 578999998877766 4788899999999999999999877433
No 106
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=92.93 E-value=0.16 Score=49.97 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=49.0
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEE---------------eCCeE-EEEEccCcEE--EeCEEEEecCcCc
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMD---------------HGDKV-SVMLENGQCY--AGDVLVGADGIWS 135 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~---------------~~~~v-~v~~~dG~~~--~adllVgADG~~S 135 (412)
..++...+.+.|.+.+ .+++++++++|++++. +++++ .|...+| ++ +||.||.|.|.+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3567778888888887 4789999999999987 45555 5777777 68 9999999999987
Q ss_pred h
Q 015167 136 K 136 (412)
Q Consensus 136 ~ 136 (412)
.
T Consensus 255 ~ 255 (448)
T 3axb_A 255 N 255 (448)
T ss_dssp H
T ss_pred H
Confidence 6
No 107
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.92 E-value=0.18 Score=50.31 Aligned_cols=57 Identities=16% Similarity=0.226 Sum_probs=43.2
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchh
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~v 137 (412)
..|-+.|.+.+ .+++|+++++|++|+.++++++ |+++||+++.||.||.+=+.....
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~ 280 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTY 280 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC-----
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHH
Confidence 45666777766 3789999999999999999876 899999999999998654444444
No 108
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=92.78 E-value=0.2 Score=51.12 Aligned_cols=61 Identities=20% Similarity=0.144 Sum_probs=48.8
Q ss_pred EEeHHHHHHHHHhhc--CCC--EEEcCCeEEEEEEeCC--eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GND--IILNDSNVIDFMDHGD--KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~--~i~~~~~v~~i~~~~~--~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
...+..+.+.|.+.+ -++ .++++++|++++.+++ .++|++++|+++++|.||.|.|..|.-
T Consensus 95 ~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 95 YATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNA 161 (549)
T ss_dssp SCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEEC
T ss_pred CCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 356778877776655 233 6889999999987765 688999999999999999999976644
No 109
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=92.67 E-value=0.22 Score=53.43 Aligned_cols=60 Identities=20% Similarity=0.362 Sum_probs=50.9
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.++...+...|.+.+ .+++++.+++|++++.+++++ .|+..+| +++||.||.|.|.+|..
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAK 209 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHH
Confidence 568888989998887 478999999999999888876 4667666 79999999999999854
No 110
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.49 E-value=0.27 Score=48.86 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=46.9
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCc-EEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQ-CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~-~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.+++++.|++.||+ ++.+|+||.|.|.++.+.
T Consensus 208 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 208 LLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCC
Confidence 3445555555 47899999999999988778889999999 899999999999987663
No 111
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=92.44 E-value=0.22 Score=46.04 Aligned_cols=60 Identities=10% Similarity=0.080 Sum_probs=48.0
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC---CeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHG---DKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~---~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..+..+.+.|.+.+ .+++++++++++.++.+. +...|++++|+++.+|.||.|+|.++..
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRN 117 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 56777777777665 367899999999997653 2678888999899999999999997644
No 112
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=92.36 E-value=0.19 Score=49.76 Aligned_cols=57 Identities=16% Similarity=0.191 Sum_probs=46.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++.++++ +.+++.||+++.+|+||.|.|.++.+.
T Consensus 209 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 209 MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 3445555555 37899999999999887654 788999999999999999999987764
No 113
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=92.14 E-value=0.2 Score=50.06 Aligned_cols=56 Identities=25% Similarity=0.307 Sum_probs=46.7
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
+.+.|.+.+ .+++++.+++|++++.+++++.+++.+|+++.+|+||.|-|..+...
T Consensus 234 ~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~ 291 (484)
T 3o0h_A 234 LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTT 291 (484)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCC
Confidence 444555544 37899999999999988888899999999999999999999987663
No 114
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.12 E-value=0.29 Score=48.60 Aligned_cols=57 Identities=18% Similarity=0.208 Sum_probs=46.3
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc-c--Cc--EEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE-N--GQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~-d--G~--~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.+++++.+++. + |+ ++.+|+||.|.|.++.+.
T Consensus 211 ~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 211 ETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 4455555555 47899999999999988888888887 7 87 899999999999987764
No 115
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=91.77 E-value=0.26 Score=50.41 Aligned_cols=61 Identities=20% Similarity=0.260 Sum_probs=49.4
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEcc---C--cEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLEN---G--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~d---G--~~~~adllVgADG~~S~v 137 (412)
.++...|...|.+.+ .++.++++++|+++..+++++. |++.| | .+++||.||.|+|.+|.-
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~ 234 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDT 234 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHH
Confidence 567788888888776 5789999999999999888753 66664 3 369999999999999844
No 116
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=91.39 E-value=0.27 Score=49.54 Aligned_cols=55 Identities=16% Similarity=0.169 Sum_probs=45.3
Q ss_pred HHHHHHHHHhhcCCCEEEcCCeEEEEEEe-CCeEEEEEccCcEEEeCEEEEecCcC
Q 015167 80 RMTLQQILAHAVGNDIILNDSNVIDFMDH-GDKVSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 80 r~~L~~~L~~~l~~~~i~~~~~v~~i~~~-~~~v~v~~~dG~~~~adllVgADG~~ 134 (412)
...|.+.|.+.++...|+++++|++|+.+ ++++.|++.+|++++||.||.|-+..
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQS 256 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHH
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHH
Confidence 45566667777755679999999999986 56799999999999999999998754
No 117
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=91.37 E-value=0.4 Score=43.77 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=48.5
Q ss_pred EEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+....+...|.+.+ +++.++ ..+|++++.++++..|++.+|+++.+|.||.|.|.++..
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWV-EGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDEL 114 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEE-ESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEE-EeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCC
Confidence 366778888887776 245554 569999999888889999999999999999999997654
No 118
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=91.34 E-value=0.36 Score=47.94 Aligned_cols=53 Identities=15% Similarity=0.115 Sum_probs=45.0
Q ss_pred HHHHHHHhhcC----------CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcC
Q 015167 82 TLQQILAHAVG----------NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 82 ~L~~~L~~~l~----------~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~ 134 (412)
.|.+.|.+.+. +..|+++++|++|+.++++++|++.+|++++||.||.|.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHH
Confidence 56667776652 357999999999999888999999999999999999999874
No 119
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=90.90 E-value=0.3 Score=49.19 Aligned_cols=57 Identities=16% Similarity=0.099 Sum_probs=47.1
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
..|-+.|.+.+ +++|+++++|++|+.+++++.|++.||++++||.||.|-+.+...+
T Consensus 215 ~~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~l~~ 271 (520)
T 1s3e_A 215 GQVSERIMDLL-GDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTLGMK 271 (520)
T ss_dssp HHHHHHHHHHH-GGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGGGGG
T ss_pred HHHHHHHHHHc-CCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHHHcc
Confidence 45666677766 4679999999999988888999999999999999999999875333
No 120
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.89 E-value=0.36 Score=48.01 Aligned_cols=62 Identities=18% Similarity=0.087 Sum_probs=47.6
Q ss_pred EEeHHHHHHHHHhhcC--CCE--EEcCCeEEEEEEeCC--eEEEEEcc---C--cEEEeCEEEEecCcCchhH
Q 015167 77 VISRMTLQQILAHAVG--NDI--ILNDSNVIDFMDHGD--KVSVMLEN---G--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l~--~~~--i~~~~~v~~i~~~~~--~v~v~~~d---G--~~~~adllVgADG~~S~vr 138 (412)
.+++..+.+.|.+.+. ++. ++++++|++++..++ +..|++.+ | .++.+|.||.|.|.+|.-+
T Consensus 97 ~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 97 YPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECCCSSSSBC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEECCCCCCCCc
Confidence 3678888888877651 444 889999999998766 67777765 4 5689999999999876553
No 121
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.66 E-value=0.6 Score=43.32 Aligned_cols=59 Identities=12% Similarity=0.048 Sum_probs=49.5
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+.+..+...|.+.+ .++.++++++|++++..++ .+.|++.+|+ +.+|.||.|.|.+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~ 125 (332)
T 3lzw_A 64 IRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFK 125 (332)
T ss_dssp EEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCE
T ss_pred CCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCC
Confidence 56788888888877 3688999999999998876 6788888886 9999999999997643
No 122
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=90.63 E-value=0.39 Score=47.77 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=45.9
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccC---cEEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENG---QCYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG---~~~~adllVgADG~~ 134 (412)
..|-+.|.+.++...|+++++|++|+.++++++|++.+| ++++||.||.|-..+
T Consensus 239 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 239 DRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp THHHHHHHHHHCGGGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 457777888875467999999999999999999999887 679999999998764
No 123
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=90.62 E-value=0.49 Score=43.97 Aligned_cols=59 Identities=15% Similarity=0.133 Sum_probs=45.7
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+.+.|.+.+ .++.+++ .++++++.+++.+.|.. ++.++.+|.||.|+|.++..
T Consensus 68 ~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~ 128 (319)
T 3cty_A 68 SIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKH 128 (319)
T ss_dssp SBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECC
T ss_pred ccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCccc
Confidence 356677777777665 3677777 78999998888777776 67789999999999987643
No 124
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=90.58 E-value=0.38 Score=44.90 Aligned_cols=60 Identities=13% Similarity=0.059 Sum_probs=46.8
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEe--CCe-EEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDH--GDK-VSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~--~~~-v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+.+.|.+.+ .++++++ .++++++.+ ++. +.|.+.+|+++++|.||.|+|.++..
T Consensus 61 ~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 61 PIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRK 125 (325)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCC
Confidence 467788888777766 3677777 589999876 443 67778899999999999999997644
No 125
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=90.56 E-value=0.47 Score=48.92 Aligned_cols=58 Identities=16% Similarity=0.196 Sum_probs=45.4
Q ss_pred HHHHHHHHHhhc---CCCEEEcCCeEEEEEEeCCeE---EEE-EccCc--EEEeCEEEEecCcCchh
Q 015167 80 RMTLQQILAHAV---GNDIILNDSNVIDFMDHGDKV---SVM-LENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 80 r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v---~v~-~~dG~--~~~adllVgADG~~S~v 137 (412)
-..|...|.+.+ ++++++++++|+++..+++.+ .+. +.+|+ ++.|+.||.|+|..|.+
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccc
Confidence 356778888876 238999999999999877753 222 25776 68999999999999988
No 126
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=90.48 E-value=0.71 Score=47.21 Aligned_cols=66 Identities=23% Similarity=0.232 Sum_probs=48.3
Q ss_pred eHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC-CeEE-EEEc--cCc--EEEeCEEEEecCcCchhHHHHhhh
Q 015167 79 SRMTLQQILAHAV--GNDIILNDSNVIDFMDHG-DKVS-VMLE--NGQ--CYAGDVLVGADGIWSKMNLLMSWL 144 (412)
Q Consensus 79 ~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~-~~v~-v~~~--dG~--~~~adllVgADG~~S~vr~~~~~~ 144 (412)
....|.+.|.+.+ .+++++++++|+++..++ ++|. |.+. +|+ ++.||.||.|.|..|..+.++..+
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERVSKY 326 (572)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHHHHh
Confidence 3567778888776 479999999999998766 5432 4443 675 589999999999999884443333
No 127
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=90.47 E-value=0.63 Score=46.62 Aligned_cols=57 Identities=18% Similarity=0.186 Sum_probs=46.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.+.+.+ .+++++.+++|++++.+++.+.|++.||+++.+|+||.|=|......
T Consensus 227 ~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 227 YLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp HHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCT
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHH
Confidence 3445555554 37899999999999887777889999999999999999999976653
No 128
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=90.44 E-value=0.37 Score=49.04 Aligned_cols=61 Identities=16% Similarity=0.119 Sum_probs=47.4
Q ss_pred EEeHHHHHHHHHhhcC--C--CEEEcCCeEEEEEEeCC--eEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAVG--N--DIILNDSNVIDFMDHGD--KVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l~--~--~~i~~~~~v~~i~~~~~--~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
...+..+.+.|.+.+. + ..++++++|++++.+++ .+.|++++|+++++|.||.|.|..|.-
T Consensus 83 ~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 83 FASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSAS 149 (545)
T ss_dssp SCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC-
T ss_pred CCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 3567777777766541 2 36889999999987654 678999999999999999999987654
No 129
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=90.43 E-value=0.34 Score=45.51 Aligned_cols=59 Identities=12% Similarity=0.028 Sum_probs=46.2
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEE-EEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSV-MLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v-~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+.+.|.+.+ .++.+++++ +++++. ++.+.| .+.+|.++.+|.||.|+|.++..
T Consensus 67 ~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 67 GITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARY 128 (335)
T ss_dssp CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccC
Confidence 366777777776665 367888886 888887 555667 78888899999999999997754
No 130
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=90.32 E-value=0.53 Score=46.71 Aligned_cols=57 Identities=18% Similarity=0.374 Sum_probs=46.4
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.+++++.+++.||+++.+|+||-|=|......
T Consensus 203 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 261 (472)
T 3iwa_A 203 SLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQ 261 (472)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHH
Confidence 3445555554 47899999999999887778889999999999999999999976554
No 131
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=90.29 E-value=0.49 Score=47.38 Aligned_cols=57 Identities=12% Similarity=0.184 Sum_probs=46.9
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.+++++.+++.+|+++.+|.||-|-|.++...
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCCC
Confidence 3455555555 47899999999999987777888888999999999999999987664
No 132
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=90.29 E-value=0.65 Score=45.03 Aligned_cols=59 Identities=15% Similarity=0.289 Sum_probs=46.6
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.+.|.+.+ .+++++++++|++++.+++++ .|+++||+++.+|+||-|=|......++
T Consensus 185 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~ 246 (404)
T 3fg2_P 185 EISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIA 246 (404)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHH
Confidence 3444555544 478999999999999877765 4899999999999999999997665443
No 133
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=90.15 E-value=0.44 Score=44.13 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=46.9
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+.+.|.+.+ .++.+++++ ++.++.+++.+.+ +.+|.++.+|.||.|+|.++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 58 DLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp SCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 356777777776665 467888886 8899877777777 7788899999999999998755
No 134
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=89.98 E-value=0.38 Score=46.82 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=41.7
Q ss_pred HHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcC
Q 015167 82 TLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 82 ~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~ 134 (412)
.|.+.|.+.+ + .|+++++|++|+.++++++|++.+|++++||.||.|=|..
T Consensus 208 ~l~~~~~~~~-g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEI-P-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTC-S-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred HHHHHHHhhC-C-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 3344444444 3 8999999999999888899999999999999999999864
No 135
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=89.08 E-value=0.7 Score=45.97 Aligned_cols=55 Identities=11% Similarity=0.087 Sum_probs=45.8
Q ss_pred HHHHHHHHhhc-C-C-CEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 81 MTLQQILAHAV-G-N-DIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 81 ~~L~~~L~~~l-~-~-~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
..|.+.|.+.+ . + ++|+++++|++|+.+++++.|++.+|++++||.||.|=|...
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 45666677766 2 3 779999999999988888999999998999999999999754
No 136
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=88.86 E-value=0.82 Score=43.22 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=45.9
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
+.+..+.+.|.+.+ .++.++++++|++++.+++++.|+..+| ++.+|.||.|-|.++.
T Consensus 85 ~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 85 ISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 45666666665554 3678999999999998777788888777 5899999999999763
No 137
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=88.86 E-value=0.89 Score=44.18 Aligned_cols=59 Identities=17% Similarity=0.218 Sum_probs=46.8
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.+.+.|.+.+ .+++++++++|++++.+++++ .|+++||+++.||+||-|=|......++
T Consensus 195 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~ 256 (415)
T 3lxd_A 195 ALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGAL 256 (415)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHH
Confidence 4445555544 478999999999998876665 6889999999999999999998766443
No 138
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=88.63 E-value=0.56 Score=46.38 Aligned_cols=59 Identities=12% Similarity=0.081 Sum_probs=47.7
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
..|.+.|.+.++...|+++++|++|+.++++++|++.+| +++||.||-|=+.....+++
T Consensus 236 ~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll 294 (475)
T 3lov_A 236 ESLIERLEEVLERSEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQVVQLL 294 (475)
T ss_dssp HHHHHHHHHHCSSCEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHHHHHHC
T ss_pred HHHHHHHHhhccCCEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHHHHHHc
Confidence 357777777775478999999999999989999999999 89999999997765433443
No 139
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=88.54 E-value=0.8 Score=45.88 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=45.7
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.+++ .+.|++.||+++.+|+||.|-|.+..+.
T Consensus 236 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 236 TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCG
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccccc
Confidence 3445555555 4789999999999987654 4788999999999999999999987664
No 140
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=88.41 E-value=0.75 Score=45.99 Aligned_cols=57 Identities=19% Similarity=0.189 Sum_probs=46.1
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.+++ .+.|+++||+++.+|+||.|-|.+..+.
T Consensus 232 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 232 ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCcc
Confidence 4455555555 4789999999999987764 4788999999999999999999987663
No 141
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=88.39 E-value=0.68 Score=46.11 Aligned_cols=56 Identities=11% Similarity=0.114 Sum_probs=44.2
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe--EEEEEccC-cEEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK--VSVMLENG-QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~--v~v~~~dG-~~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ .+++++++++|++++.++++ +.|+++|| +++.+|+||.|-|....+
T Consensus 227 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 227 CIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 4445555555 37899999999999876555 78899999 889999999999987665
No 142
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.38 E-value=0.75 Score=45.37 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=44.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc---cCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE---NGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~---dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.+++++.+++. +++++.+|+||.|-|.+..+.
T Consensus 212 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 212 QMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp HHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 3445555554 47899999999999988777888876 456899999999999986653
No 143
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=88.34 E-value=0.62 Score=47.04 Aligned_cols=57 Identities=18% Similarity=0.174 Sum_probs=46.1
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe----EEEEEccCc-EEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK----VSVMLENGQ-CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~----v~v~~~dG~-~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.++++ +.|++++|+ ++.+|.||-|-|.++...
T Consensus 256 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 256 ETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred HHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 4455555555 47899999999999876555 778898998 899999999999987764
No 144
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=88.24 E-value=0.69 Score=46.67 Aligned_cols=60 Identities=10% Similarity=0.075 Sum_probs=48.4
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC---CeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHG---DKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~---~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..+..|...|.+.+ .++.++.+++|++++.+. +...|++++|.++.+|.||.|.|.++..
T Consensus 264 ~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 264 TEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp BCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 56777888777776 378899999999997542 3678889999999999999999987643
No 145
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=88.10 E-value=0.78 Score=42.63 Aligned_cols=60 Identities=13% Similarity=0.099 Sum_probs=49.6
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc---cCcEEEeCEEEEecCcCchh
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE---NGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~---dG~~~~adllVgADG~~S~v 137 (412)
.+.+..+...|.+.+ .++.+++++ +++++.+++.+.+++. ++.++.+|.||.|.|.++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 80 GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKR 144 (338)
T ss_dssp CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCC
Confidence 467888888887776 478899888 9999988888888884 77889999999999997654
No 146
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=87.33 E-value=1.7 Score=41.00 Aligned_cols=65 Identities=14% Similarity=0.097 Sum_probs=45.9
Q ss_pred EEEeHHHHHHHHHhhc---CCCEEEcCCeEEEEEEeC----C--e---EEEEEc------------cCcEEEe-------
Q 015167 76 RVISRMTLQQILAHAV---GNDIILNDSNVIDFMDHG----D--K---VSVMLE------------NGQCYAG------- 124 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l---~~~~i~~~~~v~~i~~~~----~--~---v~v~~~------------dG~~~~a------- 124 (412)
+..+...+...|.+.+ ++++++.+++|+++..++ + . |.+... |+.++.|
T Consensus 141 ~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~ 220 (326)
T 2gjc_A 141 VVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDG 220 (326)
T ss_dssp EESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSS
T ss_pred EEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccc
Confidence 3446788888888876 588999999999998763 2 2 333221 3457999
Q ss_pred --------CEEEEecCcCchh-HHH
Q 015167 125 --------DVLVGADGIWSKM-NLL 140 (412)
Q Consensus 125 --------dllVgADG~~S~v-r~~ 140 (412)
++||.|+|..|++ +.+
T Consensus 221 ~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 221 TRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp CCCSSTTCCEEEECCCCC--CCSHH
T ss_pred cccccccCCEEEECcCCCchHHHHH
Confidence 9999999999999 443
No 147
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.29 E-value=1.3 Score=44.29 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=45.7
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCcE-EEeCEEEEecCcCchh
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQC-YAGDVLVGADGIWSKM 137 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~~-~~adllVgADG~~S~v 137 (412)
..+.+.|.+.+ .+++++.++++++++.+++ .+.++++||++ +.+|+||-|-|.....
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 34555555555 4789999999999987654 47888999988 9999999999998765
No 148
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=87.20 E-value=0.71 Score=44.93 Aligned_cols=58 Identities=17% Similarity=0.183 Sum_probs=45.4
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
+.+.|.+.+ .++++++++++++++.++....|+++||+++.+|+||-|=|..+...++
T Consensus 187 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~ 246 (410)
T 3ef6_A 187 IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLA 246 (410)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHH
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHH
Confidence 444444444 3789999999999987654457899999999999999999998766443
No 149
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=86.89 E-value=1 Score=44.13 Aligned_cols=58 Identities=21% Similarity=0.304 Sum_probs=44.2
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEE--eCCeE-EEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMD--HGDKV-SVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~--~~~~v-~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
+.+.|.+.+ .++++++++++++++. +++++ .|++.||+++.+|+||.|-|..+...++
T Consensus 193 ~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~ 255 (431)
T 1q1r_A 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELA 255 (431)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHH
T ss_pred HHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchh
Confidence 334444444 3789999999999987 44555 6889999999999999999997665433
No 150
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.58 E-value=1.5 Score=40.31 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=47.2
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+....+.+.|.+.+ .++++++ .+|++++.+++.+.++..+|.++.+|.||.|.|.....
T Consensus 67 ~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~ 127 (323)
T 3f8d_A 67 IQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRK 127 (323)
T ss_dssp EEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCcc
Confidence 56777877777766 3677877 89999998877888999999999999999999997543
No 151
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=85.94 E-value=0.92 Score=48.23 Aligned_cols=49 Identities=22% Similarity=0.182 Sum_probs=40.4
Q ss_pred HHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCc
Q 015167 82 TLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGI 133 (412)
Q Consensus 82 ~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~ 133 (412)
.|.+.|.+ ++.|+++++|++|+.++++++|++.+|++++||.||.|=..
T Consensus 535 ~l~~aLa~---gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 535 VIIEKLAE---GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp HHHHHHHT---TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred HHHHHHHh---CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 34444444 45799999999999988899999999999999999999854
No 152
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=85.91 E-value=0.92 Score=45.14 Aligned_cols=57 Identities=19% Similarity=0.158 Sum_probs=45.6
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEcc----CcEEEeCEEEEecCcCchhHH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLEN----GQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~d----G~~~~adllVgADG~~S~vr~ 139 (412)
+.+.|.+.+ .++++++++++++++.+++++.+++.| |+++.+|+||.|-|.+..+.+
T Consensus 228 ~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~ 290 (482)
T 1ojt_A 228 LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNGKL 290 (482)
T ss_dssp HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECGGG
T ss_pred HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCCCC
Confidence 444454444 368899999999999887788888887 788999999999999877643
No 153
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=85.37 E-value=1.4 Score=42.78 Aligned_cols=58 Identities=19% Similarity=0.296 Sum_probs=46.8
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
..|.+.|.+.+ .+++|+++++|++++.+++++ | ..+|++++||.||-|=|.+...+++
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRETVKLI 248 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHHHHhc
Confidence 35666677666 368999999999999888888 5 5788899999999999987655655
No 154
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=85.23 E-value=1.4 Score=43.64 Aligned_cols=56 Identities=21% Similarity=0.294 Sum_probs=42.2
Q ss_pred HHHHHHhhc---CCCEEEcCCeEEEEEEeCCeEEEEEc--cC--cEEEeCEEEEecCcCchhH
Q 015167 83 LQQILAHAV---GNDIILNDSNVIDFMDHGDKVSVMLE--NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 83 L~~~L~~~l---~~~~i~~~~~v~~i~~~~~~v~v~~~--dG--~~~~adllVgADG~~S~vr 138 (412)
+.+.|.+.+ .+++++++++|++++.+++++.+++. +| +++.+|+||.|-|..+...
T Consensus 217 ~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 217 VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCC
Confidence 344444443 37899999999999987777888887 77 6799999999999987664
No 155
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=84.94 E-value=1.9 Score=41.55 Aligned_cols=59 Identities=12% Similarity=0.169 Sum_probs=46.5
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
..|.+.|.+.+ .+++|+++++|++++.++++++ |+. +|++++||.||-|=|.+...+++
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~~ll 257 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATAVLC 257 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHHHhc
Confidence 44666777766 3689999999999999888876 655 58899999999998887555544
No 156
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=84.43 E-value=1.4 Score=43.56 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=43.9
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEE--eCCeEEEEEc-----cCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMD--HGDKVSVMLE-----NGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~--~~~~v~v~~~-----dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++. +++.+.+++. +++++.+|+||.|-|....+.
T Consensus 225 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 225 EVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 3445555555 4789999999999987 5566778876 456899999999999987663
No 157
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=84.43 E-value=0.71 Score=45.60 Aligned_cols=59 Identities=15% Similarity=0.095 Sum_probs=45.5
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEE---ccCcEEEeCEEEEecCcCchhHHH
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVML---ENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~---~dG~~~~adllVgADG~~S~vr~~ 140 (412)
..|.+.|.+.+ ++.|+++++|++|+.+++++.|++ .+|++++||.||.|=+.....+++
T Consensus 238 ~~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll 299 (478)
T 2ivd_A 238 QVLIDALAASL-GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHATAKLL 299 (478)
T ss_dssp HHHHHHHHHHH-GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHHHHHHH
T ss_pred HHHHHHHHHHh-hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHHHHHHh
Confidence 44667777777 457999999999998877888888 788889999999999876544544
No 158
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.14 E-value=1.2 Score=43.92 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=44.3
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc---cC--cEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE---NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~---dG--~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++.+++++.+++. +| +++.+|+||.|-|..+...
T Consensus 219 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 282 (470)
T 1dxl_A 219 EIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTS 282 (470)
T ss_dssp HHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECCT
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCCC
Confidence 4445555555 47889999999999877666778876 55 6799999999999987654
No 159
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=83.75 E-value=2.1 Score=42.32 Aligned_cols=57 Identities=12% Similarity=0.113 Sum_probs=43.9
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEE-----ccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVML-----ENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~-----~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++++++|++++.++++ +.+++ .+++++.+|+||.|-|..+.+.
T Consensus 221 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 221 EISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred HHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 3444555555 47899999999999987766 77775 4567899999999999987653
No 160
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=83.63 E-value=2.5 Score=41.57 Aligned_cols=55 Identities=7% Similarity=0.067 Sum_probs=43.7
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ .+++++.+++|++++..++++.|++++| ++.+|+||-|=|.+...
T Consensus 190 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 190 EMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQL 246 (452)
T ss_dssp HHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCC
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCCh
Confidence 3445555555 3789999999999997777788888777 89999999999987544
No 161
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=83.53 E-value=1.6 Score=42.83 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=45.8
Q ss_pred EeHHHHHHHHHhhcC--CCEEEcCCeEEEEEEeC--Ce---EEEEEccCc----EEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAVG--NDIILNDSNVIDFMDHG--DK---VSVMLENGQ----CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l~--~~~i~~~~~v~~i~~~~--~~---v~v~~~dG~----~~~adllVgADG~~S~v 137 (412)
..+..+.+.|...+. ++.++++++|++++.++ ++ ++|++.+|+ ++.+|.||.|.|....+
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 124 PCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp CBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCCEECC
T ss_pred CCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCCCCCC
Confidence 467777777766542 46789999999998762 33 478888876 89999999999986554
No 162
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=83.51 E-value=1.6 Score=43.30 Aligned_cols=53 Identities=15% Similarity=0.194 Sum_probs=43.3
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCc----EEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQ----CYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~----~~~adllVgADG~~ 134 (412)
..|-+.|.+.++. .|+++++|++|+.+++++.|++.+|+ +++||.||.|=+.+
T Consensus 241 ~~l~~~l~~~l~~-~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 241 DKLPTAMYRDIQD-KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp THHHHHHHHHTGG-GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred HHHHHHHHHhccc-ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 4566777777744 78999999999998888999988875 58999999988764
No 163
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=83.50 E-value=2.4 Score=42.86 Aligned_cols=57 Identities=16% Similarity=0.190 Sum_probs=45.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEE-------------------eCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMD-------------------HGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~-------------------~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++.+++++++++++. .++++.+++.||+++.+|+||-|=|......
T Consensus 193 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 193 EMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQ 270 (565)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCH
T ss_pred HHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchH
Confidence 3444454444 4789999999999987 3567888999999999999999999977654
No 164
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=83.28 E-value=2.1 Score=42.27 Aligned_cols=56 Identities=20% Similarity=0.290 Sum_probs=43.7
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc-cC--cEEEeCEEEEecCcCchhH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE-NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~-dG--~~~~adllVgADG~~S~vr 138 (412)
+.+.|.+.+ .++++++++++++++.+++++.+++. +| +++.+|+||-|-|......
T Consensus 214 ~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 274 (464)
T 2a8x_A 214 VSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVE 274 (464)
T ss_dssp HHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCS
T ss_pred HHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCC
Confidence 444454444 37899999999999887777888886 67 6799999999999976653
No 165
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=83.26 E-value=1.2 Score=44.00 Aligned_cols=43 Identities=14% Similarity=0.167 Sum_probs=34.3
Q ss_pred CCCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 92 GNDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
.+++++.++.+. .+++.+.+.+.+| .++++|.||.|+|.+|.+
T Consensus 104 ~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~ 148 (464)
T 2a8x_A 104 NKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRL 148 (464)
T ss_dssp TTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECC
T ss_pred CCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 478888877653 3556788888888 689999999999998865
No 166
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=82.66 E-value=2.9 Score=41.53 Aligned_cols=55 Identities=18% Similarity=0.192 Sum_probs=44.1
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEcc---C--cEEEeCEEEEecCcCchh
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLEN---G--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~d---G--~~~~adllVgADG~~S~v 137 (412)
+.+.|.+.+ .++.++.++++++++.+++++.+++.+ | +++.+|+||-|-|.....
T Consensus 241 ~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 241 VAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred HHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 444555554 478999999999999988888888874 5 579999999999987655
No 167
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=82.50 E-value=1.9 Score=43.04 Aligned_cols=54 Identities=13% Similarity=0.198 Sum_probs=41.8
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEE-eCCe-EEEEEccCcEEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMD-HGDK-VSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~-~~~~-v~v~~~dG~~~~adllVgADG~~ 134 (412)
..|.+.|.+.+ .+++++.+++|+++.. ++++ +.|++.+|+++.||.||.|-|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 45667776665 4778999999999987 4455 45888899999999999999876
No 168
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=82.22 E-value=1.5 Score=42.78 Aligned_cols=52 Identities=10% Similarity=-0.066 Sum_probs=42.2
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCe-EEEEEccCcEEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDK-VSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~-v~v~~~dG~~~~adllVgADG~~ 134 (412)
..|-+.|.+.+ +++|+++++|++|+.++++ +.|+. +|++++||.||.|=+..
T Consensus 215 ~~l~~~l~~~l-g~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 215 QQVSIRMAEAL-GDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHHHHHHHHHH-GGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred HHHHHHHHHhc-CCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 35566666666 4679999999999998888 88775 78889999999998875
No 169
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=81.90 E-value=3.6 Score=41.16 Aligned_cols=56 Identities=16% Similarity=0.127 Sum_probs=42.3
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEe-CCeEE-EEEc-cCc--EEEeC-EEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDH-GDKVS-VMLE-NGQ--CYAGD-VLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~-~~~v~-v~~~-dG~--~~~ad-llVgADG~~S~v 137 (412)
.|.+.|.+.+ .+++++++++|+++..+ +++|+ |.+. +++ ++.|| .||.|.|..|.-
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n 266 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAYN 266 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTTC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhhC
Confidence 6777777776 47999999999999987 44433 4443 343 58996 999999999866
No 170
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=81.81 E-value=1.7 Score=43.22 Aligned_cols=57 Identities=25% Similarity=0.211 Sum_probs=42.6
Q ss_pred HHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEc-cCcEEEeCEEEEecCcCchh
Q 015167 80 RMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLE-NGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 80 r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~-dG~~~~adllVgADG~~S~v 137 (412)
...|.+.|.+.+ .+++++.++++ ++..+++.+. +.+. ++.++.||.||.|+|..|.+
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~ 178 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYL 178 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCccc
Confidence 456677777766 57889999999 9987777652 3332 22357899999999999977
No 171
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=81.40 E-value=3.4 Score=40.49 Aligned_cols=57 Identities=18% Similarity=0.214 Sum_probs=43.1
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.+++++.....+|+++.+|+||-|=|....+.
T Consensus 192 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 192 EFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCG
T ss_pred hHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHH
Confidence 3444555544 47899999999999876666653344888999999999999876554
No 172
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=81.31 E-value=2.9 Score=42.66 Aligned_cols=60 Identities=12% Similarity=0.255 Sum_probs=45.2
Q ss_pred EeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEc---cCc--EEEeCEEEEecCcCchh
Q 015167 78 ISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLE---NGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 78 i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~---dG~--~~~adllVgADG~~S~v 137 (412)
++-..|...|.+.+ .+++++.+++|+++..+++++. |++. +|+ +++||.||-|.|.+|.-
T Consensus 185 v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~ 252 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDK 252 (571)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHH
T ss_pred EchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHH
Confidence 45566666666665 4789999999999998877643 5553 343 69999999999998743
No 173
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=81.07 E-value=1.4 Score=43.30 Aligned_cols=56 Identities=16% Similarity=0.067 Sum_probs=44.6
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
..|-+.|.+.+ .+++++++++|+++..+++++.....+|+++.||.||.|-|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 35666666655 267789999999999888887755578999999999999998864
No 174
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=80.69 E-value=3.1 Score=40.23 Aligned_cols=53 Identities=21% Similarity=0.247 Sum_probs=41.1
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
+.+.|.+.+ .+++++.++++++++ ++ .|++.||+++.+|+||-|=|......+
T Consensus 189 ~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~~~l 243 (408)
T 2gqw_A 189 LADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLANDAL 243 (408)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCccHHH
Confidence 344444444 378999999999998 33 677899999999999999999766543
No 175
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=80.41 E-value=2.1 Score=44.59 Aligned_cols=48 Identities=17% Similarity=0.048 Sum_probs=38.3
Q ss_pred HHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEcc------CcEEEeCEEEEecC
Q 015167 82 TLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLEN------GQCYAGDVLVGADG 132 (412)
Q Consensus 82 ~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~d------G~~~~adllVgADG 132 (412)
.|-+.|.+. ..|+++++|++|+.++++++|++.| |++++||.||.|=.
T Consensus 402 ~l~~~La~~---l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 402 CVPVALAEG---LDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp HHHHHHTTT---CEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred HHHHHHHhc---CceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 344455443 4799999999999999999999877 56899999998754
No 176
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=80.25 E-value=4.3 Score=39.96 Aligned_cols=55 Identities=11% Similarity=0.080 Sum_probs=44.2
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ .+++++.+++|++++.+++.+.++++ +.++.+|.||-|-|.++.+
T Consensus 217 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 217 AIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 4555666655 47899999999999987777777776 5689999999999998765
No 177
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=80.23 E-value=3.4 Score=40.82 Aligned_cols=55 Identities=18% Similarity=0.081 Sum_probs=43.9
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccC---cEEEeCEEEEecCcCchh
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENG---QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG---~~~~adllVgADG~~S~v 137 (412)
+.+.|.+.+ .+++++.++++++++.+++++.+++.++ +++.+|+||-|=|.....
T Consensus 223 ~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~~ 282 (476)
T 3lad_A 223 VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPVT 282 (476)
T ss_dssp HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCcccC
Confidence 444455544 4788999999999998888888888865 679999999999987655
No 178
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=80.15 E-value=1.3 Score=44.92 Aligned_cols=56 Identities=20% Similarity=0.181 Sum_probs=39.3
Q ss_pred HHHHHHHhhc---CCCEEEcCCeEEEEEE-eCC------eEE-EEEc---cCc--EEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV---GNDIILNDSNVIDFMD-HGD------KVS-VMLE---NGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l---~~~~i~~~~~v~~i~~-~~~------~v~-v~~~---dG~--~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ ++++++++++|+++.. +++ .+. |.+. +|+ ++.|+.||.|+|..|.+
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 3444555554 4789999999999987 434 432 4443 565 68999999999999976
No 179
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=79.82 E-value=2.6 Score=41.57 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=43.9
Q ss_pred HHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEE-EccCcEEEeCEEEEecCcCchhH
Q 015167 83 LQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVM-LENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 83 L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~-~~dG~~~~adllVgADG~~S~vr 138 (412)
+.+.|.+.+ .+++++.+++|++++.++++ +.|+ +++|+ +.+|.||-|=|..+...
T Consensus 213 ~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~ 271 (463)
T 4dna_A 213 MRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTN 271 (463)
T ss_dssp HHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCT
T ss_pred HHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCC
Confidence 445555555 47899999999999987665 6788 88998 99999999999976653
No 180
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=79.61 E-value=2.5 Score=41.88 Aligned_cols=54 Identities=13% Similarity=0.140 Sum_probs=43.2
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCe------EEEEEc--cC---cEEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDK------VSVMLE--NG---QCYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~------v~v~~~--dG---~~~~adllVgADG~~ 134 (412)
..|-+.|.+.++..+|+++++|++|+.++++ +.|++. +| ++++||.||.|-..+
T Consensus 243 ~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~ 307 (504)
T 1sez_A 243 QTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLC 307 (504)
T ss_dssp HHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHH
T ss_pred HHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHH
Confidence 4677778888754679999999999988777 777775 45 578999999998764
No 181
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=79.55 E-value=2.5 Score=40.86 Aligned_cols=52 Identities=13% Similarity=0.097 Sum_probs=40.6
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcC
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~ 134 (412)
..|.+.|.+.++ ..++++++|++++.+++++.|++.+|+ ++||.||-|=+..
T Consensus 206 ~~l~~~l~~~l~-~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 206 QAMFEHLNATLE-HPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HHHHHHHHHHSS-SCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred HHHHHHHHHhhc-ceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 345555556663 467899999999988888889888886 8999999887765
No 182
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=79.15 E-value=3.9 Score=37.55 Aligned_cols=57 Identities=21% Similarity=0.161 Sum_probs=42.2
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEcc----C--cEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLEN----G--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~d----G--~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++.+++++. |++.+ | .++.+|+||-|-|......
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCG
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChH
Confidence 4555555554 4789999999999987765543 66665 4 4799999999999875543
No 183
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=78.80 E-value=5.3 Score=41.21 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=44.5
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEE---ccCc--EEEeCEEEEecCcCchh
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VML---ENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~---~dG~--~~~adllVgADG~~S~v 137 (412)
..|...|.+.+ .+++++.++.++++..+++.+. |.. .+|+ .+.|+.||.|.|..|.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 46777887776 4789999999999987766543 333 4675 68999999999999875
No 184
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=78.46 E-value=4.3 Score=40.38 Aligned_cols=57 Identities=14% Similarity=0.190 Sum_probs=44.9
Q ss_pred HHHHHHHhhc-CCCEEEcCCeEEEEEEeCCeEEEEEc--cC--cEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV-GNDIILNDSNVIDFMDHGDKVSVMLE--NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l-~~~~i~~~~~v~~i~~~~~~v~v~~~--dG--~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ ..+.++.++++++++.+++++.+++. +| .++.+|+||-|=|....+.
T Consensus 216 ~~~~~l~~~l~~~V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~~~ 277 (492)
T 3ic9_A 216 EMKRYAEKTFNEEFYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKANVD 277 (492)
T ss_dssp HHHHHHHHHHHTTSEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEESCS
T ss_pred HHHHHHHHHHhhCcEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccCCC
Confidence 4455555555 23889999999999988888888886 77 6799999999999976553
No 185
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=76.29 E-value=6 Score=40.45 Aligned_cols=57 Identities=18% Similarity=0.254 Sum_probs=43.0
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEe-CCeEE-EEE---ccCc--EEEeCEEEEecCcCchh
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDH-GDKVS-VML---ENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~-~~~v~-v~~---~dG~--~~~adllVgADG~~S~v 137 (412)
..+.+.|.+.+ .+++++++++|+++..+ ++.+. |.+ .+|+ ++.|+.||.|.|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 45667777766 47899999999999876 44432 333 4665 58999999999998865
No 186
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=76.28 E-value=6.4 Score=38.42 Aligned_cols=45 Identities=13% Similarity=0.095 Sum_probs=38.8
Q ss_pred CCCEEEcCCeEEEEEEeCCeEEEEEc---cCcE--EEeCEEEEecCcCch
Q 015167 92 GNDIILNDSNVIDFMDHGDKVSVMLE---NGQC--YAGDVLVGADGIWSK 136 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v~v~~~---dG~~--~~adllVgADG~~S~ 136 (412)
.++.++.+++|++++.+++++.|++. +|+. +.+|+||-|=|....
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 37899999999999998888888887 6764 899999999998644
No 187
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=76.11 E-value=3.3 Score=44.46 Aligned_cols=47 Identities=17% Similarity=0.101 Sum_probs=37.9
Q ss_pred HHHHHHHhhcCCCEEEcCCeEEEEEEeCCeEEEEEcc------CcEEEeCEEEEec
Q 015167 82 TLQQILAHAVGNDIILNDSNVIDFMDHGDKVSVMLEN------GQCYAGDVLVGAD 131 (412)
Q Consensus 82 ~L~~~L~~~l~~~~i~~~~~v~~i~~~~~~v~v~~~d------G~~~~adllVgAD 131 (412)
.|-+.|.+.+ .|+++++|+.|+.++++|+|++.| |.+++||.||.|=
T Consensus 573 ~L~~aLa~~l---~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTv 625 (852)
T 2xag_A 573 CVPVALAEGL---DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTL 625 (852)
T ss_dssp HHHHHHTTTC---CEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECC
T ss_pred HHHHHHHhCC---CEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECC
Confidence 4555555544 589999999999999999999876 5689999999874
No 188
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=75.88 E-value=3.9 Score=40.16 Aligned_cols=55 Identities=9% Similarity=0.095 Sum_probs=42.3
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEe--CCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDH--GDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~--~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.|-+.|.+.+ .+++++++++|+++..+ ++++.....+|+++.||.||.|=|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccch
Confidence 5666666665 46789999999999987 6665433336889999999999888754
No 189
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=74.88 E-value=2.4 Score=41.50 Aligned_cols=43 Identities=26% Similarity=0.273 Sum_probs=36.3
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+++++++++|+.++.++. .|++++|+++.+|.||.|.|.++..
T Consensus 74 gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 74 NIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPRP 116 (431)
T ss_dssp TEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCccC
Confidence 678999999999987554 4667889999999999999997755
No 190
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=74.74 E-value=3.1 Score=40.95 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=33.5
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
+++++.++.+. .+.+.+.|.+.+| .++++|.||.|+|.++.+
T Consensus 110 gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~ 153 (470)
T 1dxl_A 110 KVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVKS 153 (470)
T ss_dssp TCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEECC
T ss_pred CCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCCC
Confidence 67888888654 3456777877788 689999999999998765
No 191
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=74.39 E-value=3.1 Score=40.87 Aligned_cols=57 Identities=18% Similarity=0.117 Sum_probs=43.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe-EEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK-VSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~-v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
.|.+.|.+.+ .+++|+++++|++++.++++ +.|+. ++.+++||.||-|=+.....++
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASVLSEL 294 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHHHHHh
Confidence 4677777776 36899999999999987766 77765 5668999999999766443344
No 192
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=74.22 E-value=5 Score=39.51 Aligned_cols=57 Identities=18% Similarity=0.136 Sum_probs=45.5
Q ss_pred HHHHHHHHhhcCCCEEEcCCeEEEEEEeC-CeEEEEEc--cCc--EEEeCEEEEecCcCchhH
Q 015167 81 MTLQQILAHAVGNDIILNDSNVIDFMDHG-DKVSVMLE--NGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 81 ~~L~~~L~~~l~~~~i~~~~~v~~i~~~~-~~v~v~~~--dG~--~~~adllVgADG~~S~vr 138 (412)
..+.+.|.+.+. +.++.++++++++.++ +++.+++. ||+ ++.+|+||-|=|......
T Consensus 214 ~~~~~~l~~~l~-v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 214 QDIVNTLLSILK-LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp HHHHHHHHHHHC-CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCC
T ss_pred HHHHHHHHhcCE-EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccc
Confidence 345566666654 8899999999999877 78889998 676 799999999999876554
No 193
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=72.82 E-value=5.7 Score=39.26 Aligned_cols=56 Identities=16% Similarity=0.118 Sum_probs=43.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCC-eEEEEEccCc-----EEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGD-KVSVMLENGQ-----CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~-~v~v~~~dG~-----~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ .+++++.++++++++.+++ .+.|++.++. ++.+|+||-|=|.....
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~ 291 (483)
T 3dgh_A 228 QMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLV 291 (483)
T ss_dssp HHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccCc
Confidence 3445555555 4788999999999987655 4778888765 79999999999986555
No 194
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=72.56 E-value=6.9 Score=36.62 Aligned_cols=44 Identities=14% Similarity=0.032 Sum_probs=37.6
Q ss_pred CEEEcCCeEEEEEEeCCeEEEEEccCcEEE-eCEEEEecCcCchh
Q 015167 94 DIILNDSNVIDFMDHGDKVSVMLENGQCYA-GDVLVGADGIWSKM 137 (412)
Q Consensus 94 ~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~-adllVgADG~~S~v 137 (412)
+.++.++++++++.+++.+.+++.||+++. +|+||-|=|.....
T Consensus 230 v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 230 IEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATK 274 (369)
T ss_dssp EEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGGG
T ss_pred EEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCcc
Confidence 889999999999877778889999998775 59999999987655
No 195
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=72.03 E-value=4 Score=40.39 Aligned_cols=43 Identities=14% Similarity=0.042 Sum_probs=33.1
Q ss_pred CCCEEEcCCeEEEEEEeCCeEEEEEccC------------cEEEeCEEEEecCcCchh
Q 015167 92 GNDIILNDSNVIDFMDHGDKVSVMLENG------------QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v~v~~~dG------------~~~~adllVgADG~~S~v 137 (412)
.+++++.++.+. .+++.+.+.+.|| .++++|.||.|+|.++.+
T Consensus 108 ~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 108 RKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp TTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred CCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 367888777654 3456788877777 679999999999998765
No 196
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=70.70 E-value=4.3 Score=39.65 Aligned_cols=56 Identities=20% Similarity=0.332 Sum_probs=41.6
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhH
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
..+.+.|.+.+ .+++++++++|++++.+ +++ .+.+ +|+++.+|.||.|-|.++.+.
T Consensus 191 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 191 KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEESCG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCChH
Confidence 34555565555 37899999999999865 444 3555 667899999999999977653
No 197
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=70.23 E-value=11 Score=38.06 Aligned_cols=57 Identities=12% Similarity=0.019 Sum_probs=47.4
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
++.+.|.+.+ .++.++.+..++.++..++++.+++.+++++.+|.|+-|=|.+-.+.
T Consensus 264 ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 264 QCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp HHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred hHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 3444555555 47899999999999999999999999999999999999999876663
No 198
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=70.19 E-value=1.1 Score=43.83 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=56.3
Q ss_pred cceeeCHHHHHHHHHcccChHHHHHhcccccccceeEEEECCCCcEEEEEeCCCcccccCCCeEEEEeHHHHHHHHHhhc
Q 015167 12 GPIQIQSNALAALEAIDLDVAEEVMRAGCVTGDRINGLVDGISGSWYIKFDTFTPAAEKGLPVTRVISRMTLQQILAHAV 91 (412)
Q Consensus 12 agi~l~~~~~~~L~~l~~Gl~~~l~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~g~~~~~~i~r~~L~~~L~~~l 91 (412)
.+..+.+.++..++.++.+.|..... ....+ .+... ... ...+... ...+ .+.+++..+...|.+.+
T Consensus 66 ~~~~~~~~~~~~~~~lg~~~~~~~~~----~~~~~-~~~~~-~~~-~~~~~~~-----~~~~-~~~v~~~~l~~~L~~~~ 132 (430)
T 3ihm_A 66 NTVAHNAVTVQREVALDVNEWPSEEF----GYFGH-YYYVG-GPQ-PMRFYGD-----LKAP-SRAVDYRLYQPMLMRAL 132 (430)
T ss_dssp CCCCBCHHHHHHHHHTTCCCSCHHHH----CEEEE-EEEEC-SSS-CEEEEEE-----EEEE-EBEECHHHHHHHHHHHH
T ss_pred cchhccchhhhhhhhcChhhhhhhcc----cccce-eEEEC-CCC-ccccchh-----cCCc-ceeecHHHHHHHHHHHH
Confidence 34456778888888884344443221 11122 23332 111 1122110 0111 36899999999999887
Q ss_pred --CCCEEEcCC-eEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 92 --GNDIILNDS-NVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 92 --~~~~i~~~~-~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
.++++++.. ++.++++ ....+|+||+|||.+|.++++
T Consensus 133 ~~~Gv~v~~~~v~~~~l~~------------~~~~ad~VV~AdG~~S~~~~~ 172 (430)
T 3ihm_A 133 EARGGKFCYDAVSAEDLEG------------LSEQYDLLVVCTGKYALGKVF 172 (430)
T ss_dssp HHTTCEEEECCCCGGGHHH------------HHTTSSEEEECCCCTTGGGGS
T ss_pred HHcCCEEEEEecchhhhhh------------hcccCCEEEECCCCcchHHhc
Confidence 456665521 0111110 012689999999999988654
No 199
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=69.50 E-value=4.8 Score=38.71 Aligned_cols=51 Identities=10% Similarity=0.148 Sum_probs=39.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
.+.+.|.+.+ .+++++.+++|++++.+ + ++++||+++.+|+||-|=|....
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTGN 271 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEECC
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCcc
Confidence 3444455544 37899999999998643 3 77899999999999999997543
No 200
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=67.89 E-value=7.5 Score=39.49 Aligned_cols=55 Identities=16% Similarity=0.245 Sum_probs=43.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.+++|++++.++++ |++.+|+++.+|+||-|=|..+...
T Consensus 229 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~~ 285 (588)
T 3ics_A 229 EMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPESS 285 (588)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECCH
T ss_pred HHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCChH
Confidence 4445555555 47899999999999876554 6778999999999999999976654
No 201
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=67.89 E-value=12 Score=34.38 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=41.4
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEc---cC--cEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLE---NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~---dG--~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++.++....|++. +| .++.+|+||-|=|..+...
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECG
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCch
Confidence 3445555554 37899999999999875443356666 77 5799999999999876543
No 202
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=67.70 E-value=8.1 Score=36.16 Aligned_cols=47 Identities=19% Similarity=0.218 Sum_probs=36.6
Q ss_pred CCCEEEcCCeEEEEEEeCCeE-EEEEc--cC--cEEEeCEEEEecCcCchhH
Q 015167 92 GNDIILNDSNVIDFMDHGDKV-SVMLE--NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v-~v~~~--dG--~~~~adllVgADG~~S~vr 138 (412)
.++++++++++++++.+++++ .|++. +| .++.+|+||-|-|......
T Consensus 215 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 215 GTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp TSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCG
T ss_pred CceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHH
Confidence 368899999999998876654 45554 77 5799999999999876543
No 203
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=67.56 E-value=4.9 Score=39.62 Aligned_cols=41 Identities=12% Similarity=0.106 Sum_probs=32.5
Q ss_pred CCCEEEcCCeEEEEEEeCCeEEEEEccC--cE------EEeCEEEEecCcCc
Q 015167 92 GNDIILNDSNVIDFMDHGDKVSVMLENG--QC------YAGDVLVGADGIWS 135 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~------~~adllVgADG~~S 135 (412)
.++++++++.+. .+++.+.|.+.+| .+ +++|.||.|+|+++
T Consensus 109 ~gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~p 157 (478)
T 1v59_A 109 NKVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGSEV 157 (478)
T ss_dssp TTCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCEEE
T ss_pred CCCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcCCCC
Confidence 478888888764 2556788887777 56 99999999999877
No 204
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=67.17 E-value=3.9 Score=40.23 Aligned_cols=54 Identities=15% Similarity=0.083 Sum_probs=40.1
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
.+.+.|.+.+ .+++++.+++|++++. + ++.++..+| +++.+|.||.|-|....+
T Consensus 213 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 213 ELTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp HHHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 3444555544 3789999999999986 3 466654467 689999999999997665
No 205
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=66.58 E-value=3.5 Score=39.52 Aligned_cols=42 Identities=7% Similarity=-0.066 Sum_probs=37.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcC
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIW 134 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~ 134 (412)
+++++.+++++.++.+.+...+.+++|+++.+|+||.|=|..
T Consensus 216 gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~ 257 (401)
T 3vrd_B 216 LIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQR 257 (401)
T ss_dssp SEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEE
T ss_pred CcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcC
Confidence 678999999999988888888999999999999999997764
No 206
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=66.45 E-value=10 Score=37.38 Aligned_cols=56 Identities=16% Similarity=0.001 Sum_probs=42.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCe--EEEEEcc---C----cEEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDK--VSVMLEN---G----QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~--v~v~~~d---G----~~~~adllVgADG~~S~v 137 (412)
.+.+.+.+.+ .+++++.++++++++.++++ +.+++.+ | .++.+|+||-|=|.....
T Consensus 229 ~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~ 295 (478)
T 3dk9_A 229 MISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNT 295 (478)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCC
Confidence 4445555555 47899999999999877655 6788876 2 579999999999986555
No 207
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=66.44 E-value=8.1 Score=35.45 Aligned_cols=46 Identities=15% Similarity=0.078 Sum_probs=36.8
Q ss_pred CCEEEcCCeEEEEEEeCCeEE-EEEcc-----CcEEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVS-VMLEN-----GQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~-v~~~d-----G~~~~adllVgADG~~S~vr 138 (412)
+++++.++++++++.+++++. |++.+ +.++.+|+||-|=|......
T Consensus 223 gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 223 KIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp TEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCG
T ss_pred CeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh
Confidence 788999999999998776544 77776 45799999999999865443
No 208
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=66.21 E-value=6 Score=39.34 Aligned_cols=48 Identities=23% Similarity=0.157 Sum_probs=39.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHHH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~~ 140 (412)
+++++.++++++++.++....+.+++|+++.+|+||-|=|.++...++
T Consensus 271 GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~ 318 (493)
T 1y56_A 271 GIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPI 318 (493)
T ss_dssp TCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHH
T ss_pred CcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHH
Confidence 688999999999986554445778899999999999999998776444
No 209
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=64.60 E-value=13 Score=36.54 Aligned_cols=55 Identities=18% Similarity=0.313 Sum_probs=40.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++++++++++++++.+ +++. +.+ ++.++.+|.||.|-|..+...
T Consensus 228 ~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 228 DMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEEESCG
T ss_pred HHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCCcChH
Confidence 3445555554 47899999999999875 4443 444 556899999999999976554
No 210
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=64.59 E-value=14 Score=33.38 Aligned_cols=48 Identities=17% Similarity=0.072 Sum_probs=38.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEcc---Cc--EEEeCEEEEecCcCchhHHH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLEN---GQ--CYAGDVLVGADGIWSKMNLL 140 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~d---G~--~~~adllVgADG~~S~vr~~ 140 (412)
++++++++++++++.++....|++.+ |+ ++.+|+||-|=|......++
T Consensus 204 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~ 256 (323)
T 3f8d_A 204 NVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFA 256 (323)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHH
T ss_pred CcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHH
Confidence 78899999999998775555677776 76 79999999999987665443
No 211
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=64.09 E-value=15 Score=38.06 Aligned_cols=56 Identities=16% Similarity=0.237 Sum_probs=42.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEE-EEE---ccCc--EEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVS-VML---ENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~-v~~---~dG~--~~~adllVgADG~~S~v 137 (412)
.|...|.+.+ .+++++.++.|+++..+++.+. |.. .+|+ .+.|+.||-|.|..|.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5667777766 4789999999999987766432 322 4676 48999999999998854
No 212
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=63.73 E-value=11 Score=37.42 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=40.4
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeE-EEEEccCcEEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKV-SVMLENGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v-~v~~~dG~~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .+++++.++++++++. ++++ .+.+ +|+++.+|+||-|=|....+.
T Consensus 237 ~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 237 DLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp HHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEECCG
T ss_pred HHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcChH
Confidence 3445555554 3789999999999986 3444 3455 788999999999999876553
No 213
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=63.69 E-value=6.2 Score=38.94 Aligned_cols=52 Identities=13% Similarity=0.130 Sum_probs=41.5
Q ss_pred HHHHHHHHHhhcC--CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCc
Q 015167 80 RMTLQQILAHAVG--NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGI 133 (412)
Q Consensus 80 r~~L~~~L~~~l~--~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~ 133 (412)
-..|-+.|.+.+. +++++++++|+++..++.. +++.||+++.||.||-+=-.
T Consensus 221 ~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 221 TGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCH
Confidence 3567788888873 6789999999999877664 56789999999999976443
No 214
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=63.52 E-value=18 Score=32.82 Aligned_cols=46 Identities=11% Similarity=-0.061 Sum_probs=36.3
Q ss_pred CCEEEcCCeEEEEEEeCCeE-EEEEc---cCc--EEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKV-SVMLE---NGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v-~v~~~---dG~--~~~adllVgADG~~S~vr 138 (412)
++++++++++++++.+++++ .+++. +|+ ++.+|.||-|-|......
T Consensus 193 gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 244 (311)
T 2q0l_A 193 KIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNA 244 (311)
T ss_dssp TEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCG
T ss_pred CeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChh
Confidence 78899999999998876654 46665 676 689999999999865443
No 215
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=62.48 E-value=16 Score=37.76 Aligned_cols=50 Identities=16% Similarity=0.050 Sum_probs=38.6
Q ss_pred HHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC--CeEE-EEEccCcEEEeCEEEE
Q 015167 80 RMTLQQILAHAV--GNDIILNDSNVIDFMDHG--DKVS-VMLENGQCYAGDVLVG 129 (412)
Q Consensus 80 r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~--~~v~-v~~~dG~~~~adllVg 129 (412)
-..|-++|.+.+ .+.++++++.|..|..++ ++++ |...+|+++.||.||.
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs 431 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFII 431 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEE
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEE
Confidence 456667776665 478899999999998776 5554 4457899999999998
No 216
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=62.15 E-value=7.5 Score=38.40 Aligned_cols=45 Identities=16% Similarity=0.018 Sum_probs=36.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVML-ENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~-~dG~--~~~adllVgADG~~S~v 137 (412)
+++++++++++.++.+++.+.+.. .+|+ ++++|.||.|.|.+...
T Consensus 107 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (480)
T 3cgb_A 107 GIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVM 154 (480)
T ss_dssp CCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccC
Confidence 678889999999987777777665 4576 79999999999986543
No 217
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=60.96 E-value=9.4 Score=37.82 Aligned_cols=58 Identities=12% Similarity=0.173 Sum_probs=43.8
Q ss_pred HHHHHHHHHhhcCCCEEEcCC--eEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 80 RMTLQQILAHAVGNDIILNDS--NVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 80 r~~L~~~L~~~l~~~~i~~~~--~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
-..|-+.|.+.++...|++++ +|++|+.+++++ ++.+|++++||.||-|=......++
T Consensus 215 ~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~~~~G~~~~ad~VI~a~p~~~~~~l 274 (484)
T 4dsg_A 215 TGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--TFSNGEVVSYDYLISTVPFDNLLRM 274 (484)
T ss_dssp THHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--EETTSCEEECSEEEECSCHHHHHHH
T ss_pred HHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--EECCCCEEECCEEEECCCHHHHHHH
Confidence 466778888888544788894 699999877765 4589999999999998766544444
No 218
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=57.12 E-value=22 Score=32.08 Aligned_cols=46 Identities=11% Similarity=0.081 Sum_probs=36.0
Q ss_pred CCEEEcCCeEEEEEEeCCeEE-EEEc--cCc--EEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVS-VMLE--NGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~-v~~~--dG~--~~~adllVgADG~~S~vr 138 (412)
++++++++++++++.+++++. +++. +|+ ++.+|+||-|=|......
T Consensus 197 gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 247 (315)
T 3r9u_A 197 KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNE 247 (315)
T ss_dssp TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCG
T ss_pred CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCch
Confidence 788999999999988775533 5555 886 789999999999764443
No 219
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=56.24 E-value=8.4 Score=36.58 Aligned_cols=53 Identities=19% Similarity=0.322 Sum_probs=39.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
.+.+.|.+.+ .+++++.++++++++ .+ .++++||+ +.+|+||.|-|......+
T Consensus 184 ~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~~~l 238 (367)
T 1xhc_A 184 ELSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPNVDL 238 (367)
T ss_dssp HHHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEECCHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcCHHH
Confidence 3444444444 378999999999987 23 36778888 999999999998776553
No 220
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=56.04 E-value=14 Score=38.06 Aligned_cols=56 Identities=13% Similarity=0.274 Sum_probs=40.6
Q ss_pred HHHHHHHhhc---CCC-EEEcCCeEEEEEEeCC---eEE-EE---EccCc--EEEeCEEEEecCcCchh
Q 015167 82 TLQQILAHAV---GND-IILNDSNVIDFMDHGD---KVS-VM---LENGQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 82 ~L~~~L~~~l---~~~-~i~~~~~v~~i~~~~~---~v~-v~---~~dG~--~~~adllVgADG~~S~v 137 (412)
.+.++|.+.+ +++ +++.++.|+++..+++ ++. |. ..+|+ .+.|+.||.|.|..|.+
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 3445555544 278 8999999999987765 543 22 24665 58999999999999864
No 221
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=55.69 E-value=16 Score=35.57 Aligned_cols=42 Identities=17% Similarity=0.098 Sum_probs=32.9
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC-cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG-QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG-~~~~adllVgADG~~S~v 137 (412)
+++++.++.+. .+++.+.|+..+| .++++|.||.|.|.++..
T Consensus 105 gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p~~ 147 (455)
T 1ebd_A 105 KVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRPIE 147 (455)
T ss_dssp TCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred CCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCCCC
Confidence 67888887653 3456788888888 689999999999987654
No 222
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=55.66 E-value=21 Score=35.13 Aligned_cols=57 Identities=12% Similarity=0.132 Sum_probs=42.3
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeC-CeEEEEEcc---Cc--EEEeCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHG-DKVSVMLEN---GQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~-~~v~v~~~d---G~--~~~adllVgADG~~S~vr 138 (412)
.+.+.|.+.+ .++.++.++++++++..+ +.+.+++.+ |+ ++.+|+||-|=|......
T Consensus 226 ~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 226 QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEESCG
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccC
Confidence 4455555555 478999999999998754 457787766 55 478999999999876553
No 223
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=55.56 E-value=11 Score=36.37 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=35.3
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+++++.+++|+.++.+.. +|++++|+++.+|.||.|.|.+...
T Consensus 73 ~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 73 EVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp SCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred CCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 678999999999976544 4667889899999999999986544
No 224
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=52.32 E-value=32 Score=31.36 Aligned_cols=46 Identities=17% Similarity=0.083 Sum_probs=34.9
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEc---cCc--EEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLE---NGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~---dG~--~~~adllVgADG~~S~vr 138 (412)
+++++.+++++++..++....|++. +|+ ++.+|+||-|=|......
T Consensus 202 gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 202 KMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp TEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred CceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChH
Confidence 7889999999999875432356665 675 689999999999865443
No 225
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=51.54 E-value=2.3 Score=39.96 Aligned_cols=50 Identities=18% Similarity=0.322 Sum_probs=38.0
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..++...+.+.|.+.+ .+++++. ++|++++..+ .++||.||.|+|.+|.-
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~ 188 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAGA 188 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChHh
Confidence 4678888999998887 4677776 7777664321 26799999999999853
No 226
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=50.55 E-value=18 Score=35.12 Aligned_cols=57 Identities=14% Similarity=0.247 Sum_probs=41.2
Q ss_pred HHHHHHHhhc-CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchhHH
Q 015167 82 TLQQILAHAV-GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKMNL 139 (412)
Q Consensus 82 ~L~~~L~~~l-~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~vr~ 139 (412)
.+.+.|.+.+ ..++++.++++++++.++ ++...+.+|+++.+|.||-|=|......+
T Consensus 191 ~~~~~l~~~l~~~v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l 248 (449)
T 3kd9_A 191 EVTDILEEKLKKHVNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPNIEL 248 (449)
T ss_dssp HHHHHHHHHHTTTSEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEECCHH
T ss_pred HHHHHHHHHHHhCcEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccCHHH
Confidence 3444555554 128899999999997654 45445678889999999999998755543
No 227
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=48.33 E-value=19 Score=34.45 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=35.2
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++++++|++++.++. +|++++|+++.+|.||-|=|++.
T Consensus 76 ~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 76 NIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp TCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCCc
Confidence 788999999999987655 56778999999999999999744
No 228
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=48.24 E-value=4.5 Score=38.10 Aligned_cols=49 Identities=18% Similarity=0.142 Sum_probs=38.4
Q ss_pred EEEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 76 RVISRMTLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 76 ~~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
..++...|...|.+.+ .+++++. ++|++++.+ .+ +||.||.|+|.+|.-
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G~~i~~-~~v~~l~~~-----------~~-~a~~VV~A~G~~s~~ 187 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLGATFER-RTVTSLEQA-----------FD-GADLVVNATGLGAKS 187 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEE-CCCSBGGGT-----------CS-SCSEEEECCGGGGGT
T ss_pred ceecHHHHHHHHHHHHHHCCCEEEE-EEcccHhhc-----------Cc-CCCEEEECCCcchhh
Confidence 4678999999999887 4678877 888777543 12 899999999999853
No 229
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=47.65 E-value=34 Score=30.77 Aligned_cols=47 Identities=17% Similarity=0.196 Sum_probs=35.4
Q ss_pred CCCEEEcCCeEEEEEEeCCeE-EEEEcc---Cc--EEEeCEEEEecCcCchhH
Q 015167 92 GNDIILNDSNVIDFMDHGDKV-SVMLEN---GQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v-~v~~~d---G~--~~~adllVgADG~~S~vr 138 (412)
.+++++.++++++++.+++++ .+++.+ |+ ++.+|.||-|=|......
T Consensus 193 ~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 245 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTN 245 (310)
T ss_dssp TTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred CCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCch
Confidence 378899999999998765554 466654 54 689999999999765443
No 230
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=47.40 E-value=33 Score=31.27 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=35.3
Q ss_pred CCEEEcCCeEEEEEEeCC--eE-EEEEc---cC--cEEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGD--KV-SVMLE---NG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~--~v-~v~~~---dG--~~~~adllVgADG~~S~vr 138 (412)
++++++++++++++.+++ ++ .+++. +| .++.+|+||-|=|......
T Consensus 209 gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 209 KIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp TEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred CeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchH
Confidence 788999999999987664 43 35565 45 4689999999999876553
No 231
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=46.92 E-value=15 Score=33.47 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=36.6
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEcc-----CcEEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLEN-----GQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~d-----G~~~~adllVgADG~~S~vr 138 (412)
++.++.++++++++.+++...|++.+ +.++.+|+||-|=|......
T Consensus 203 gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 253 (332)
T 3lzw_A 203 KVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLG 253 (332)
T ss_dssp SCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCG
T ss_pred CeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCch
Confidence 78899999999998876655677776 35799999999999865443
No 232
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=46.11 E-value=9.2 Score=40.10 Aligned_cols=50 Identities=10% Similarity=-0.088 Sum_probs=35.4
Q ss_pred HHHHHHHHhhc-CCCEEEcCCeEE--EEEEeCCe-------EEEEE-ccCc--EEEeCEEEEe
Q 015167 81 MTLQQILAHAV-GNDIILNDSNVI--DFMDHGDK-------VSVML-ENGQ--CYAGDVLVGA 130 (412)
Q Consensus 81 ~~L~~~L~~~l-~~~~i~~~~~v~--~i~~~~~~-------v~v~~-~dG~--~~~adllVgA 130 (412)
..|-+.|.+.+ ++..|+++++|+ .|.+++++ |+|+. .+|+ +++||.||.|
T Consensus 347 ~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvT 409 (721)
T 3ayj_A 347 VEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILA 409 (721)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEEC
T ss_pred HHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEEC
Confidence 45556666665 223366789999 99987655 88844 5676 7899999986
No 233
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=45.04 E-value=31 Score=31.33 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=35.5
Q ss_pred CCCEEEcCCeEEEEEEeCCeE-EEEEc---cCc--EEEeCEEEEecCcCchhH
Q 015167 92 GNDIILNDSNVIDFMDHGDKV-SVMLE---NGQ--CYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v-~v~~~---dG~--~~~adllVgADG~~S~vr 138 (412)
.++++++++++++++.+++++ .+++. +|+ ++.+|.||-|=|......
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCG
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChH
Confidence 378899999999998765522 45554 675 689999999999865543
No 234
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=44.23 E-value=32 Score=33.60 Aligned_cols=42 Identities=14% Similarity=0.052 Sum_probs=31.6
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEcc-C-cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLEN-G-QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~d-G-~~~~adllVgADG~~S~v 137 (412)
+++++.++.+ .+ +.+.+.|+..+ | .++++|.||.|.|.++.+
T Consensus 111 gv~~~~g~~~-~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~ 154 (474)
T 1zmd_A 111 KVVHVNGYGK-IT--GKNQVTATKADGGTQVIDTKNILIATGSEVTP 154 (474)
T ss_dssp TCEEEESEEE-EE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECC
T ss_pred CCEEEEEEEE-Ee--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCC
Confidence 6788877643 23 45677888777 4 579999999999987654
No 235
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=43.69 E-value=17 Score=25.25 Aligned_cols=31 Identities=13% Similarity=0.255 Sum_probs=24.5
Q ss_pred CCCEEEcCCeEEEEEEeCCeEEEEEccCcEE
Q 015167 92 GNDIILNDSNVIDFMDHGDKVSVMLENGQCY 122 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~ 122 (412)
++...+|..++++++..+.-..|.|.||++.
T Consensus 21 ~Gd~~yYparI~Si~s~~~~Y~V~fKdgT~e 51 (66)
T 2l8d_A 21 PGSVLYYEVQVTSYDDASHLYTVKYKDGTEL 51 (66)
T ss_dssp TTSSCEEEEEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCccceEEEEEEeccCCceEEEEecCCCEE
Confidence 4556678889999996666788999998763
No 236
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=43.56 E-value=15 Score=36.39 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=34.2
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
+++++.+++++.++.+++.+.+.. +| .++++|.||.|.|.+...
T Consensus 106 gv~v~~~~~v~~i~~~~~~v~v~~-~g~~~~~~~d~lviAtG~~p~~ 151 (490)
T 2bc0_A 106 GAKVYMESPVQSIDYDAKTVTALV-DGKNHVETYDKLIFATGSQPIL 151 (490)
T ss_dssp TCEEETTCCEEEEETTTTEEEEEE-TTEEEEEECSEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEECCCCEEEEEe-CCcEEEEECCEEEECCCCCcCC
Confidence 678889999999987777666542 43 579999999999976543
No 237
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=43.00 E-value=25 Score=33.97 Aligned_cols=42 Identities=14% Similarity=0.113 Sum_probs=33.9
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+++++ ..+++.++.++. .|++++|+++.+|.||.|-|.++..
T Consensus 73 gv~~~-~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~ 114 (437)
T 3sx6_A 73 GIHFI-AQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAF 114 (437)
T ss_dssp TCEEE-CSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECG
T ss_pred CCEEE-EeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCc
Confidence 67776 468999976655 5778899999999999999997654
No 238
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=40.81 E-value=26 Score=34.86 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=36.0
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEeCCeEEEEEccCc----EEEeCEEEEecCcC
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDHGDKVSVMLENGQ----CYAGDVLVGADGIW 134 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~~~~v~v~~~dG~----~~~adllVgADG~~ 134 (412)
.+.+.+.+.+ .+++++.+++|++++.+.-.+.....||+ ++.+|+||-|=|..
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 3444444444 37999999999998643222334456764 58999999999974
No 239
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=38.12 E-value=37 Score=30.12 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=31.8
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++ .+++++++.++ .|++.||+++.+|+||-|=|...
T Consensus 188 gv~i~-~~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 188 GVRVE-TTRIREIAGHA---DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp TCEEE-CSCEEEEETTE---EEEETTSCEEEESEEEECCEEEC
T ss_pred CcEEE-cceeeeeecCC---eEEeCCCCEEEEEEEEEccCccc
Confidence 67787 48898886532 78889999999999999999864
No 240
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=37.67 E-value=29 Score=33.42 Aligned_cols=38 Identities=16% Similarity=0.059 Sum_probs=30.0
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEcc----CcEEEeCEEEEecCcC
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLEN----GQCYAGDVLVGADGIW 134 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~d----G~~~~adllVgADG~~ 134 (412)
+++++++++|++++. +++ ++++ ++++.+|+||-|=|..
T Consensus 214 GV~i~~~~~v~~v~~--~~v--~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 214 NIDWIANVAVKAIEP--DKV--IYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCEEECSCEEEEECS--SEE--EEECTTSCEEEEECSEEEEECEEE
T ss_pred CCEEEeCCEEEEEeC--CeE--EEEecCCCceEEeeeEEEECCCCc
Confidence 789999999999864 344 4555 6789999999997764
No 241
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=35.88 E-value=28 Score=34.97 Aligned_cols=41 Identities=24% Similarity=0.178 Sum_probs=31.1
Q ss_pred CCEEEc--CCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILN--DSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~--~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++++.. +..++.++. ++ |.++||+.+++|+||-|=|-+...
T Consensus 344 nV~lv~~~~~~I~~it~--~g--v~~~dG~~~~~DvIV~ATGf~~~~ 386 (540)
T 3gwf_A 344 NVEAVAIKENPIREVTA--KG--VVTEDGVLHELDVLVFATGFDAVD 386 (540)
T ss_dssp TEEEEETTTSCEEEECS--SE--EEETTCCEEECSEEEECCCBSCSS
T ss_pred CEEEEeCCCCCccEEec--Ce--EEcCCCCEEECCEEEECCccCccc
Confidence 556653 567777754 33 667999999999999999997654
No 242
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=35.05 E-value=27 Score=34.44 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=35.3
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++.++.+++|++++.... +|+++||+++.+|.||-|-|++...
T Consensus 104 gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p~~ 146 (493)
T 1m6i_A 104 GVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTPRS 146 (493)
T ss_dssp EEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEECC
T ss_pred CeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 577888999999987654 4667899999999999999986543
No 243
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=34.86 E-value=31 Score=33.49 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=34.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEc-c--CcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLE-N--GQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~-d--G~~~~adllVgADG~~S~v 137 (412)
+++++++++++.++.+++.+.+... + +.++++|.||.|.|.+..+
T Consensus 72 gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~ 119 (452)
T 2cdu_A 72 GANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTV 119 (452)
T ss_dssp TCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred CCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCC
Confidence 6788889999999877776666531 2 4579999999999976543
No 244
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=34.29 E-value=1e+02 Score=27.37 Aligned_cols=57 Identities=11% Similarity=0.045 Sum_probs=41.7
Q ss_pred EEeHHHHHHHHHhhc--CCCEEEcCCeEEEEEEeC--CeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 77 VISRMTLQQILAHAV--GNDIILNDSNVIDFMDHG--DKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 77 ~i~r~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~--~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
.+....+...|.+.+ .++.++++ +++++ .++ +.+.+.+..+.++.+|.||-|-|...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 58 VMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGKTELAKAVIVCTGSAP 118 (315)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCCEEEeCEEEEeeCCCC
Confidence 356777777777766 36788887 89999 666 56775344333899999999999843
No 245
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=33.42 E-value=40 Score=32.35 Aligned_cols=42 Identities=21% Similarity=0.142 Sum_probs=32.8
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
+++++. .+++.++.+.. .|++++|+++.+|.||.|.|.+...
T Consensus 70 gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~~ 111 (430)
T 3h28_A 70 NIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp TEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEEC
T ss_pred CCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccccc
Confidence 566765 48888876554 5677899999999999999987543
No 246
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=32.58 E-value=36 Score=32.95 Aligned_cols=41 Identities=7% Similarity=0.119 Sum_probs=33.5
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~v 137 (412)
++.++.+++|++++. + .+++++|+++.+|+||-|=|..-.+
T Consensus 202 gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~Pn~ 242 (437)
T 4eqs_A 202 EIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHPNS 242 (437)
T ss_dssp TCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEESC
T ss_pred ceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceecCc
Confidence 688999999988753 2 4778999999999999999975443
No 247
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=32.49 E-value=45 Score=31.82 Aligned_cols=41 Identities=20% Similarity=0.266 Sum_probs=34.7
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++.+++++.++.... .|++.+|+++.+|.||-|-|.+.
T Consensus 71 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp TCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred CCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCcc
Confidence 688999999999976554 56778999999999999999763
No 248
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=32.14 E-value=27 Score=24.32 Aligned_cols=30 Identities=7% Similarity=0.171 Sum_probs=23.9
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEE
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCY 122 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~ 122 (412)
+...+|..++++++..+.-..|.|.||++.
T Consensus 25 Gd~~yYparItSits~~~~Y~VkfKdgT~e 54 (68)
T 2dig_A 25 GSSLYYEVEILSHDSTSQLYTVKYKDGTEL 54 (68)
T ss_dssp TTCCEEEEEEEEEETTTTEEEEECTTSCEE
T ss_pred CCccceEEEEEEeccCCceEEEEecCCCEE
Confidence 555678899999996666788999998753
No 249
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=31.67 E-value=41 Score=30.83 Aligned_cols=45 Identities=11% Similarity=0.044 Sum_probs=33.2
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEc---cC--cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLE---NG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~---dG--~~~~adllVgADG~~S~v 137 (412)
++++++++++++++.+++...+++. +| .++.+|+||-|=|.....
T Consensus 205 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~ 254 (335)
T 2a87_A 205 KIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRS 254 (335)
T ss_dssp TEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECC
T ss_pred CcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccCh
Confidence 7889999999999876532234443 45 478999999999986544
No 250
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=31.62 E-value=46 Score=32.14 Aligned_cols=44 Identities=14% Similarity=0.138 Sum_probs=34.3
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEE-ccCc--EEEeCEEEEecCcCch
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVML-ENGQ--CYAGDVLVGADGIWSK 136 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~-~dG~--~~~adllVgADG~~S~ 136 (412)
+++++.+++++.++.+++.+.+.. .+|+ ++++|.||-|-|.+..
T Consensus 70 gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~ 116 (447)
T 1nhp_A 70 GVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPF 116 (447)
T ss_dssp TCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred CCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcC
Confidence 678888999999987777666654 3465 3899999999998653
No 251
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=29.72 E-value=18 Score=28.08 Aligned_cols=26 Identities=8% Similarity=0.202 Sum_probs=20.1
Q ss_pred eeeeCcCCceeecCCCCcEEeCCCCEEEE
Q 015167 348 TYITDNEGRRYRVSPNFPARFRPSNSIQF 376 (412)
Q Consensus 348 t~vn~~~~~~~~l~~~~~~~l~~gd~i~~ 376 (412)
.+||+. .|.+..+-.++|++||.|.|
T Consensus 70 VLVNg~---d~e~l~gldt~L~dgD~V~f 95 (110)
T 2k9x_A 70 VLVNSC---DAEVVGGMDYVLNDGDTVEF 95 (110)
T ss_dssp EEESSS---BHHHHTSSCCCCCSSCEEEE
T ss_pred EEECCe---eeeccCCcccCCCCcCEEEE
Confidence 667776 44555677899999999987
No 252
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=28.80 E-value=17 Score=28.52 Aligned_cols=26 Identities=19% Similarity=0.379 Sum_probs=19.6
Q ss_pred eeeeCcCCceeecCCCCcEEeCCCCEEEE
Q 015167 348 TYITDNEGRRYRVSPNFPARFRPSNSIQF 376 (412)
Q Consensus 348 t~vn~~~~~~~~l~~~~~~~l~~gd~i~~ 376 (412)
.|||+. .|++..+..++|++||.|.|
T Consensus 76 VlVN~~---di~~l~gldt~L~dGDeV~i 101 (114)
T 1wgk_A 76 VLINDA---DWELLGELDYQLQDQDSILF 101 (114)
T ss_dssp EEESSS---BHHHHCTTTCBCCSSEEEEE
T ss_pred EEECCe---eeeccCCcCcCCCCCCEEEE
Confidence 677876 34454567899999999887
No 253
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=28.78 E-value=1.2e+02 Score=27.20 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=39.1
Q ss_pred EeHHHHHHHHHhhc-C-CCEEEcCCeEEEEEEeC-CeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 78 ISRMTLQQILAHAV-G-NDIILNDSNVIDFMDHG-DKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 78 i~r~~L~~~L~~~l-~-~~~i~~~~~v~~i~~~~-~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+.-..|.+.+.+.+ . ....++...++.+...+ +..++...+|+++++|-||-|=|++.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 57 IKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp BCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 45556666555554 1 23333455666666544 45778899999999999999999854
No 254
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=28.28 E-value=84 Score=32.26 Aligned_cols=43 Identities=21% Similarity=0.142 Sum_probs=34.6
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~vr 138 (412)
+++++.++++++++ ++++.++ .+| +++.+|+||-|=|......
T Consensus 587 GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p~~~ 631 (671)
T 1ps9_A 587 GVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEPNRA 631 (671)
T ss_dssp TCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEECCT
T ss_pred CCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccccHH
Confidence 78999999999987 3566655 678 5799999999999876553
No 255
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=27.94 E-value=57 Score=31.35 Aligned_cols=40 Identities=23% Similarity=0.170 Sum_probs=31.7
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++.+ +|++++.+.. +|++++|+++.+|+||-|=|++.
T Consensus 70 gv~~i~~-~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 70 NIEFINE-KAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp TEEEECS-CEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred CcEEEEe-EEEEEECCCC--EEEECCCCEEECCEEEEeCCCCc
Confidence 5666654 7888876655 46788999999999999999854
No 256
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=26.97 E-value=1.3e+02 Score=29.70 Aligned_cols=57 Identities=9% Similarity=-0.021 Sum_probs=39.1
Q ss_pred HHHHHHHHhhc--CCCEEEcCCeEEEEEEeC----CeEEEEE--ccCc---EEEeCEEEEecCcCchh
Q 015167 81 MTLQQILAHAV--GNDIILNDSNVIDFMDHG----DKVSVML--ENGQ---CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 81 ~~L~~~L~~~l--~~~~i~~~~~v~~i~~~~----~~v~v~~--~dG~---~~~adllVgADG~~S~v 137 (412)
.++.+.|.+.+ .+++++.+++++.++..+ +++.+++ .+|. ++.+|+||-|=|....+
T Consensus 250 ~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~ 317 (519)
T 3qfa_A 250 QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACT 317 (519)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccC
Confidence 34555555555 478999999888887543 4455544 4663 56899999999986544
No 257
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=26.11 E-value=1.1e+02 Score=29.15 Aligned_cols=40 Identities=18% Similarity=-0.021 Sum_probs=31.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcC
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIW 134 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~ 134 (412)
+++++.+++|++++ ++++.+...+| +++.+|+||-|=|..
T Consensus 214 GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 214 NIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred CeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCC
Confidence 78999999999985 45666665555 368999999998864
No 258
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=25.11 E-value=1.6e+02 Score=29.45 Aligned_cols=57 Identities=7% Similarity=0.022 Sum_probs=39.5
Q ss_pred HHHHHHHhhc--CCCEEEcCCeEEEEEEe------C---CeEEEE--EccCcEEE--eCEEEEecCcCchhH
Q 015167 82 TLQQILAHAV--GNDIILNDSNVIDFMDH------G---DKVSVM--LENGQCYA--GDVLVGADGIWSKMN 138 (412)
Q Consensus 82 ~L~~~L~~~l--~~~~i~~~~~v~~i~~~------~---~~v~v~--~~dG~~~~--adllVgADG~~S~vr 138 (412)
.+.+.+.+.+ .+++++++++++.++.. + +++.++ +.+|+++. +|+||-|=|....+.
T Consensus 327 ~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 327 QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGG
T ss_pred HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccC
Confidence 4445555554 47899999988888653 2 445444 56887665 999999999876553
No 259
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=22.65 E-value=76 Score=30.13 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=34.0
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++.+++++.++.... .|++.+|+++.+|.||-|-|.+.
T Consensus 79 ~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 79 AVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGDP 119 (415)
T ss_dssp TEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEEC
T ss_pred CcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCcc
Confidence 678899999999976554 56778999999999999999653
No 260
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=22.63 E-value=97 Score=29.68 Aligned_cols=39 Identities=13% Similarity=0.028 Sum_probs=29.4
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEE--cc-----CcEEEeCEEEEecCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVML--EN-----GQCYAGDVLVGADGI 133 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~--~d-----G~~~~adllVgADG~ 133 (412)
+++++.+++|++++. +++.+.. .| ++++.+|+||-|=|.
T Consensus 222 gI~~~~~~~v~~v~~--~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 222 GIEAYTNCKVTKVED--NKMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp TCEEECSEEEEEEET--TEEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred CCEEEcCCEEEEEEC--CeEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 789999999999864 4555443 23 567899999999774
No 261
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=22.00 E-value=82 Score=31.52 Aligned_cols=39 Identities=15% Similarity=0.289 Sum_probs=29.4
Q ss_pred CCEEEc--CCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCch
Q 015167 93 NDIILN--DSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWSK 136 (412)
Q Consensus 93 ~~~i~~--~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S~ 136 (412)
++++.. +..|+.++. ++ |.++|| .+++|+||-|=|-+..
T Consensus 352 nV~lv~~~~~~I~~it~--~g--v~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 352 NVHLVDIREAPIQEVTP--EG--IKTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp TEEEEETTTSCEEEEET--TE--EEESSC-EEECSEEEECCCCBSS
T ss_pred CEEEEecCCCCceEEcc--Ce--EEeCCC-eeecCEEEECCccccc
Confidence 566654 677777753 44 566899 9999999999999753
No 262
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=21.26 E-value=1.1e+02 Score=29.57 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=31.6
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccC--cEEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENG--QCYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG--~~~~adllVgADG~~S~v 137 (412)
+++++.++.+. + +.+.+.|...+| .++++|.||.|-|.+...
T Consensus 107 ~v~~~~g~~~~-i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~ 150 (468)
T 2qae_A 107 KVTYYKGEGSF-E--TAHSIRVNGLDGKQEMLETKKTIIATGSEPTE 150 (468)
T ss_dssp TCEEEEEEEEE-E--ETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred CCEEEEEEEEE-e--eCCEEEEEecCCceEEEEcCEEEECCCCCcCC
Confidence 67787776542 3 456788888888 689999999999986543
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=21.21 E-value=1.3e+02 Score=30.82 Aligned_cols=44 Identities=14% Similarity=0.031 Sum_probs=33.9
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEc---cCcEEEeCEEEEecCcCchhH
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLE---NGQCYAGDVLVGADGIWSKMN 138 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~---dG~~~~adllVgADG~~S~vr 138 (412)
+++++.+++|++++. +++.+... +++++.+|.||-|=|......
T Consensus 581 GV~i~~~~~V~~i~~--~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~ 627 (690)
T 3k30_A 581 GVARVTDHAVVAVGA--GGVTVRDTYASIERELECDAVVMVTARLPREE 627 (690)
T ss_dssp TCEEEESEEEEEEET--TEEEEEETTTCCEEEEECSEEEEESCEEECCH
T ss_pred CCEEEcCcEEEEEEC--CeEEEEEccCCeEEEEECCEEEECCCCCCChH
Confidence 789999999999974 45555542 456799999999999876553
No 264
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=21.19 E-value=81 Score=29.81 Aligned_cols=42 Identities=10% Similarity=-0.061 Sum_probs=31.3
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCc----EEEeCEEEEecCcCchh
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQ----CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~----~~~adllVgADG~~S~v 137 (412)
+++++.+ +|+.++.++.. |++.+++ ++.+|.||-|-|.+...
T Consensus 70 gv~~~~~-~v~~i~~~~~~--V~~~~g~~~~~~~~~d~lViAtG~~~~~ 115 (409)
T 3h8l_A 70 GIQFQEG-TVEKIDAKSSM--VYYTKPDGSMAEEEYDYVIVGIGAHLAT 115 (409)
T ss_dssp TCEEEEC-EEEEEETTTTE--EEEECTTSCEEEEECSEEEECCCCEECG
T ss_pred CeEEEEe-eEEEEeCCCCE--EEEccCCcccceeeCCEEEECCCCCcCc
Confidence 5777766 89998876654 4455665 39999999999996543
No 265
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=20.64 E-value=1.4e+02 Score=29.56 Aligned_cols=46 Identities=17% Similarity=0.201 Sum_probs=35.1
Q ss_pred CCCEEEcCCeEEEEEEeCCeE-EEEEcc---Cc--EEEeCEEEEecCcCchh
Q 015167 92 GNDIILNDSNVIDFMDHGDKV-SVMLEN---GQ--CYAGDVLVGADGIWSKM 137 (412)
Q Consensus 92 ~~~~i~~~~~v~~i~~~~~~v-~v~~~d---G~--~~~adllVgADG~~S~v 137 (412)
+++.++.++++++++.+++++ .+++.+ |+ ++.+|.||-|=|.....
T Consensus 404 ~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~ 455 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNT 455 (521)
T ss_dssp TTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESC
T ss_pred CCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCc
Confidence 478899999999998766555 466654 54 58999999999975444
No 266
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.21 E-value=88 Score=29.26 Aligned_cols=40 Identities=18% Similarity=-0.043 Sum_probs=32.0
Q ss_pred CCEEEcCCeEEEEEEeCCeEEEEEccCcEEEeCEEEEecCcCc
Q 015167 93 NDIILNDSNVIDFMDHGDKVSVMLENGQCYAGDVLVGADGIWS 135 (412)
Q Consensus 93 ~~~i~~~~~v~~i~~~~~~v~v~~~dG~~~~adllVgADG~~S 135 (412)
+++++.+++++.++.... .|+ .+|+++++|.||-|=|.+.
T Consensus 74 ~v~~~~g~~v~~id~~~~--~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRK--VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp TEEEECSCCEEEEETTTT--EEE-ESSCEEECSEEEECCCEEE
T ss_pred CcEEEECCEEEEEECCCC--EEE-ECCcEEECCEEEECCCCCC
Confidence 678888999998876543 344 6888999999999999754
Done!