Query 015174
Match_columns 412
No_of_seqs 146 out of 366
Neff 7.7
Searched_HMMs 46136
Date Fri Mar 29 03:48:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015174.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015174hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06963 FPN1: Ferroportin1 (F 100.0 3.3E-74 7.1E-79 581.8 35.6 380 2-384 44-432 (432)
2 KOG2601 Iron transporter [Inor 100.0 3.8E-56 8.2E-61 427.0 16.4 390 2-411 69-486 (503)
3 PF05977 MFS_3: Transmembrane 100.0 1.5E-30 3.3E-35 271.4 34.3 346 3-399 52-399 (524)
4 PRK11195 lysophospholipid tran 99.9 5.4E-21 1.2E-25 193.4 33.4 341 4-404 46-388 (393)
5 PRK06814 acylglycerophosphoeth 99.9 4.4E-19 9.5E-24 201.9 33.4 319 4-367 60-393 (1140)
6 PRK10489 enterobactin exporter 99.9 1.5E-18 3.3E-23 176.2 31.7 336 4-392 60-397 (417)
7 TIGR00900 2A0121 H+ Antiporter 99.8 6.9E-18 1.5E-22 165.9 32.2 316 4-366 42-359 (365)
8 PRK15402 multidrug efflux syst 99.8 7.3E-16 1.6E-20 155.9 37.8 319 5-378 57-379 (406)
9 PRK11102 bicyclomycin/multidru 99.8 3.7E-15 8E-20 148.6 37.2 326 5-383 35-361 (377)
10 TIGR00901 2A0125 AmpG-related 99.8 5E-16 1.1E-20 154.1 29.4 301 6-354 32-355 (356)
11 PRK15403 multidrug efflux syst 99.8 2.3E-15 5E-20 153.4 34.3 318 7-380 62-384 (413)
12 PRK11646 multidrug resistance 99.8 1.3E-15 2.9E-20 154.3 32.3 300 6-367 56-356 (400)
13 PRK03545 putative arabinose tr 99.8 5.4E-15 1.2E-19 148.8 36.2 298 6-367 54-352 (390)
14 TIGR00710 efflux_Bcr_CflA drug 99.8 7E-15 1.5E-19 146.3 36.1 319 6-380 50-371 (385)
15 PRK11652 emrD multidrug resist 99.8 8.9E-15 1.9E-19 147.2 36.4 320 5-382 52-372 (394)
16 PRK11043 putative transporter; 99.8 1.2E-14 2.5E-19 146.7 36.8 313 5-376 50-363 (401)
17 PRK08633 2-acyl-glycerophospho 99.7 1.8E-15 3.9E-20 172.0 33.7 314 4-365 55-379 (1146)
18 PRK11902 ampG muropeptide tran 99.7 1.1E-14 2.5E-19 147.3 35.0 293 6-348 43-347 (402)
19 PF07690 MFS_1: Major Facilita 99.7 4.2E-16 9.1E-21 152.7 23.1 308 4-359 40-350 (352)
20 PRK09874 drug efflux system pr 99.7 1.4E-14 3E-19 145.8 34.5 332 5-397 63-400 (408)
21 PRK10213 nepI ribonucleoside t 99.7 2.2E-14 4.7E-19 145.2 35.7 300 5-368 64-365 (394)
22 TIGR00893 2A0114 d-galactonate 99.7 4.1E-15 9E-20 146.9 29.6 332 5-370 38-373 (399)
23 PRK12307 putative sialic acid 99.7 7.6E-15 1.6E-19 149.0 32.0 320 5-371 62-384 (426)
24 PRK05122 major facilitator sup 99.7 2.2E-14 4.7E-19 144.5 31.8 303 4-367 59-362 (399)
25 PRK11551 putative 3-hydroxyphe 99.7 4.8E-14 1E-18 142.2 34.1 335 5-397 59-398 (406)
26 PRK12382 putative transporter; 99.7 2.3E-14 5E-19 144.1 31.4 305 4-369 59-363 (392)
27 PRK10473 multidrug efflux syst 99.7 7.7E-14 1.7E-18 140.3 34.3 229 6-284 48-277 (392)
28 PRK11128 putative 3-phenylprop 99.7 6.6E-14 1.4E-18 140.7 31.0 293 5-357 48-341 (382)
29 PRK10091 MFS transport protein 99.7 1.6E-13 3.4E-18 138.0 33.1 328 5-397 47-378 (382)
30 TIGR00897 2A0118 polyol permea 99.7 4.2E-13 9.1E-18 135.9 35.1 324 5-380 57-387 (402)
31 TIGR00891 2A0112 putative sial 99.7 5.9E-14 1.3E-18 140.3 28.0 326 5-369 56-389 (405)
32 PRK14995 methyl viologen resis 99.7 2E-13 4.4E-18 142.3 32.8 318 6-356 51-399 (495)
33 TIGR00890 2A0111 Oxalate/Forma 99.7 2.1E-13 4.6E-18 134.4 29.9 307 5-367 47-354 (377)
34 TIGR00899 2A0120 sugar efflux 99.6 8.3E-13 1.8E-17 131.1 33.0 296 7-365 44-344 (375)
35 TIGR00881 2A0104 phosphoglycer 99.6 5.5E-14 1.2E-18 138.7 24.2 324 5-367 39-369 (379)
36 COG2814 AraJ Arabinose efflux 99.6 1.4E-12 3.1E-17 130.5 33.3 293 7-369 59-361 (394)
37 PRK09705 cynX putative cyanate 99.6 8.2E-13 1.8E-17 133.5 31.7 330 6-400 54-386 (393)
38 PRK15011 sugar efflux transpor 99.6 1.7E-12 3.6E-17 131.1 32.9 301 6-369 61-365 (393)
39 PRK11273 glpT sn-glycerol-3-ph 99.6 1.3E-12 2.8E-17 134.5 31.4 319 5-358 72-397 (452)
40 PRK11010 ampG muropeptide tran 99.6 5.4E-12 1.2E-16 131.6 35.6 305 6-363 56-371 (491)
41 PRK11663 regulatory protein Uh 99.6 2.3E-12 4.9E-17 132.0 32.0 325 5-369 67-398 (434)
42 PRK10504 putative transporter; 99.6 6.3E-12 1.4E-16 129.6 35.0 318 6-360 55-405 (471)
43 TIGR00902 2A0127 phenyl propri 99.6 2.5E-12 5.4E-17 129.4 30.6 215 103-355 125-339 (382)
44 TIGR00711 efflux_EmrB drug res 99.6 2.7E-12 5.8E-17 132.3 31.1 324 5-363 46-403 (485)
45 PRK03893 putative sialic acid 99.6 4E-12 8.8E-17 131.7 32.2 326 6-374 65-432 (496)
46 PRK10054 putative transporter; 99.6 2.6E-12 5.6E-17 130.1 30.0 314 6-380 53-370 (395)
47 TIGR02718 sider_RhtX_FptX side 99.6 1.1E-11 2.4E-16 124.7 34.4 235 103-369 130-365 (390)
48 TIGR00883 2A0106 metabolite-pr 99.6 2.3E-12 4.9E-17 127.9 27.4 310 7-364 46-369 (394)
49 cd06174 MFS The Major Facilita 99.6 4.7E-12 1E-16 123.2 28.6 282 4-369 42-326 (352)
50 PRK10133 L-fucose transporter; 99.6 9.2E-12 2E-16 128.0 31.8 307 4-367 69-405 (438)
51 TIGR00895 2A0115 benzoate tran 99.5 3E-12 6.6E-17 127.3 26.3 319 5-365 61-395 (398)
52 TIGR00892 2A0113 monocarboxyla 99.5 5.1E-12 1.1E-16 130.4 28.3 365 9-410 67-440 (455)
53 TIGR00879 SP MFS transporter, 99.5 4.3E-12 9.4E-17 128.9 26.7 335 5-365 80-440 (481)
54 PRK09528 lacY galactoside perm 99.5 6.2E-12 1.3E-16 127.9 27.2 306 5-357 55-365 (420)
55 TIGR00712 glpT glycerol-3-phos 99.5 2.2E-11 4.8E-16 124.8 30.9 328 5-365 70-403 (438)
56 TIGR00903 2A0129 major facilit 99.5 7.1E-11 1.5E-15 118.8 33.0 320 6-390 36-361 (368)
57 TIGR00792 gph sugar (Glycoside 99.5 2.8E-11 6E-16 123.2 29.8 309 5-363 44-373 (437)
58 PRK09556 uhpT sugar phosphate 99.5 1.8E-11 4E-16 126.5 28.5 331 5-369 73-411 (467)
59 TIGR00896 CynX cyanate transpo 99.5 2.6E-11 5.7E-16 120.3 27.7 294 5-363 44-341 (355)
60 TIGR00889 2A0110 nucleoside tr 99.5 6.9E-11 1.5E-15 120.7 30.0 157 203-364 200-365 (418)
61 PRK03633 putative MFS family t 99.5 2.3E-10 5E-15 114.9 31.8 293 6-367 51-344 (381)
62 TIGR00894 2A0114euk Na(+)-depe 99.4 1.2E-10 2.5E-15 120.2 30.0 347 6-393 86-448 (465)
63 PRK10406 alpha-ketoglutarate t 99.4 3E-10 6.5E-15 116.2 31.9 295 10-355 77-383 (432)
64 PRK15075 citrate-proton sympor 99.4 1E-10 2.2E-15 119.8 28.1 294 12-355 72-378 (434)
65 PRK03699 putative transporter; 99.4 3.1E-10 6.7E-15 114.5 29.8 226 6-284 52-279 (394)
66 TIGR00882 2A0105 oligosacchari 99.4 3.5E-10 7.5E-15 114.1 29.8 319 5-370 47-371 (396)
67 PRK10077 xylE D-xylose transpo 99.4 8.1E-10 1.7E-14 113.9 32.3 330 6-360 65-416 (479)
68 TIGR00886 2A0108 nitrite extru 99.4 2.3E-10 5E-15 113.3 26.4 242 5-284 46-299 (366)
69 PRK09952 shikimate transporter 99.4 1.6E-09 3.4E-14 111.3 32.8 128 234-366 273-402 (438)
70 PRK10642 proline/glycine betai 99.4 2.5E-09 5.3E-14 111.4 33.9 153 234-392 273-428 (490)
71 TIGR00788 fbt folate/biopterin 99.4 2.1E-10 4.5E-15 119.1 25.0 325 5-365 70-408 (468)
72 TIGR02332 HpaX 4-hydroxyphenyl 99.4 3.8E-10 8.2E-15 115.0 26.5 329 6-375 53-401 (412)
73 TIGR00898 2A0119 cation transp 99.3 2.2E-09 4.8E-14 111.7 32.0 344 5-391 136-492 (505)
74 PF11700 ATG22: Vacuole efflux 99.3 1.7E-08 3.7E-13 104.8 36.9 198 194-394 264-468 (477)
75 PRK10429 melibiose:sodium symp 99.2 5.1E-09 1.1E-13 108.6 27.6 312 9-359 55-382 (473)
76 TIGR00885 fucP L-fucose:H+ sym 99.2 4.1E-08 8.9E-13 100.1 31.7 234 4-284 46-307 (410)
77 PRK09848 glucuronide transport 99.2 3.7E-08 8.1E-13 101.2 31.5 153 201-360 218-378 (448)
78 PLN00028 nitrate transmembrane 99.2 2.6E-08 5.7E-13 103.5 30.5 226 7-276 82-318 (476)
79 PRK09669 putative symporter Ya 99.2 3.3E-08 7.1E-13 101.6 29.7 302 7-359 56-377 (444)
80 TIGR01299 synapt_SV2 synaptic 99.2 1E-07 2.3E-12 103.7 33.6 136 249-393 598-733 (742)
81 PF13347 MFS_2: MFS/sugar tran 99.1 1.8E-08 3.9E-13 103.0 25.6 305 8-362 49-376 (428)
82 COG2271 UhpC Sugar phosphate p 99.1 2.4E-08 5.2E-13 99.9 23.7 344 11-396 79-436 (448)
83 TIGR00887 2A0109 phosphate:H+ 99.1 2.5E-07 5.5E-12 96.6 32.4 335 5-369 65-453 (502)
84 COG2807 CynX Cyanate permease 99.1 3.1E-07 6.8E-12 90.3 28.7 306 1-375 49-364 (395)
85 TIGR00924 yjdL_sub1_fam amino 99.0 4.4E-07 9.5E-12 94.4 30.6 353 7-390 59-464 (475)
86 TIGR01272 gluP glucose/galacto 99.0 2.7E-07 5.9E-12 90.6 27.4 253 70-369 18-289 (310)
87 KOG2615 Permease of the major 99.0 1.2E-08 2.6E-13 100.6 17.2 314 6-364 78-408 (451)
88 PRK11462 putative transporter; 99.0 6.8E-07 1.5E-11 92.6 30.3 227 11-283 60-300 (460)
89 PF03825 Nuc_H_symport: Nucleo 99.0 1.7E-06 3.6E-11 88.1 31.8 148 206-360 202-353 (400)
90 PRK10207 dipeptide/tripeptide 98.9 3.6E-06 7.7E-11 88.0 32.4 115 10-142 64-179 (489)
91 PF03209 PUCC: PUCC protein; 98.9 6E-06 1.3E-10 82.9 30.5 309 12-357 30-350 (403)
92 COG2270 Permeases of the major 98.9 2.5E-06 5.4E-11 85.6 27.4 160 194-367 235-400 (438)
93 COG2211 MelB Na+/melibiose sym 98.9 2.8E-06 6E-11 87.3 28.0 236 91-355 136-381 (467)
94 COG0738 FucP Fucose permease [ 98.9 4.4E-06 9.5E-11 83.4 28.3 317 3-372 55-387 (422)
95 TIGR00805 oat sodium-independe 98.8 2.1E-07 4.6E-12 100.2 19.4 263 5-285 77-408 (633)
96 PRK15034 nitrate/nitrite trans 98.8 2.5E-05 5.4E-10 80.8 33.1 186 203-397 244-457 (462)
97 PRK09584 tppB putative tripept 98.8 1.3E-05 2.9E-10 83.9 31.4 119 13-149 74-193 (500)
98 KOG1330 Sugar transporter/spin 98.8 6.2E-08 1.3E-12 97.8 12.3 311 3-357 75-398 (493)
99 KOG0569 Permease of the major 98.7 2.3E-05 5E-10 81.1 30.2 319 9-360 73-420 (485)
100 KOG2532 Permease of the major 98.7 1.1E-05 2.4E-10 83.6 27.9 351 8-396 85-448 (466)
101 KOG3764 Vesicular amine transp 98.6 8.8E-07 1.9E-11 88.1 15.4 311 7-379 117-438 (464)
102 TIGR01301 GPH_sucrose GPH fami 98.6 0.0003 6.4E-09 73.2 33.0 116 5-129 48-175 (477)
103 PF01306 LacY_symp: LacY proto 98.6 2.7E-05 5.8E-10 79.1 24.3 264 109-408 141-410 (412)
104 COG2223 NarK Nitrate/nitrite t 98.5 7.2E-05 1.6E-09 75.2 26.3 331 11-397 64-404 (417)
105 KOG2816 Predicted transporter 98.5 2.3E-05 5E-10 81.1 23.4 307 6-363 72-385 (463)
106 PF03092 BT1: BT1 family; Int 98.5 4.9E-05 1.1E-09 78.3 24.2 347 4-384 33-402 (433)
107 PF07690 MFS_1: Major Facilita 98.4 2.2E-05 4.9E-10 76.6 18.8 134 237-379 22-156 (352)
108 PRK10489 enterobactin exporter 98.4 1.1E-05 2.3E-10 82.0 16.7 159 202-364 8-166 (417)
109 TIGR00710 efflux_Bcr_CflA drug 98.4 3.1E-05 6.6E-10 76.9 18.9 126 233-367 27-152 (385)
110 TIGR00893 2A0114 d-galactonate 98.3 1.1E-05 2.3E-10 79.5 14.8 133 234-375 17-149 (399)
111 PRK15462 dipeptide/tripeptide 98.3 0.0026 5.5E-08 66.6 32.9 118 7-142 56-174 (493)
112 TIGR00900 2A0121 H+ Antiporter 98.3 3.5E-05 7.6E-10 75.5 17.6 132 233-368 21-152 (365)
113 PRK11102 bicyclomycin/multidru 98.3 2.7E-05 5.9E-10 77.4 16.4 128 233-369 13-140 (377)
114 KOG2533 Permease of the major 98.3 0.00017 3.7E-09 75.2 22.7 235 4-274 89-337 (495)
115 PF06609 TRI12: Fungal trichot 98.2 0.001 2.2E-08 70.8 27.8 109 247-362 350-459 (599)
116 PF05631 DUF791: Protein of un 98.2 0.00027 5.8E-09 70.0 21.8 229 4-284 77-317 (354)
117 PRK11663 regulatory protein Uh 98.2 7.8E-05 1.7E-09 76.4 18.2 128 229-367 41-170 (434)
118 PRK11551 putative 3-hydroxyphe 98.2 9.1E-05 2E-09 74.6 18.3 134 234-376 38-171 (406)
119 TIGR00897 2A0118 polyol permea 98.2 0.00016 3.6E-09 73.1 20.1 126 234-364 36-162 (402)
120 TIGR00895 2A0115 benzoate tran 98.2 5.8E-05 1.3E-09 74.9 16.3 125 234-367 40-164 (398)
121 PRK10091 MFS transport protein 98.2 0.00012 2.7E-09 73.4 18.5 130 231-369 23-152 (382)
122 PRK11646 multidrug resistance 98.2 0.00011 2.5E-09 74.4 18.4 126 234-368 33-159 (400)
123 TIGR00881 2A0104 phosphoglycer 98.2 2E-05 4.3E-10 77.5 12.4 123 230-361 14-136 (379)
124 PRK12382 putative transporter; 98.2 0.0001 2.2E-09 74.1 17.4 134 232-367 36-171 (392)
125 PRK10473 multidrug efflux syst 98.2 0.00017 3.8E-09 72.3 19.0 128 234-370 26-153 (392)
126 PRK05122 major facilitator sup 98.1 5.1E-05 1.1E-09 76.3 15.1 131 233-364 37-168 (399)
127 PRK03633 putative MFS family t 98.1 0.0002 4.3E-09 71.9 18.6 131 230-369 25-155 (381)
128 PRK10054 putative transporter; 98.1 0.00021 4.5E-09 72.4 18.8 126 233-367 29-155 (395)
129 TIGR00711 efflux_EmrB drug res 98.1 0.00012 2.5E-09 75.5 17.1 128 234-370 25-152 (485)
130 TIGR02332 HpaX 4-hydroxyphenyl 98.0 0.00017 3.8E-09 73.4 16.2 117 239-364 36-152 (412)
131 PRK03545 putative arabinose tr 98.0 0.00024 5.1E-09 71.5 16.9 125 234-367 32-156 (390)
132 TIGR00885 fucP L-fucose:H+ sym 98.0 0.0003 6.6E-09 71.7 17.8 125 233-363 25-149 (410)
133 TIGR00891 2A0112 putative sial 98.0 0.00032 7E-09 69.9 17.7 124 234-366 35-158 (405)
134 PRK11652 emrD multidrug resist 98.0 0.00049 1.1E-08 69.1 19.0 127 234-369 31-157 (394)
135 cd06174 MFS The Major Facilita 98.0 0.00041 8.9E-09 67.2 17.7 132 230-370 18-149 (352)
136 TIGR00880 2_A_01_02 Multidrug 98.0 0.00022 4.8E-09 59.4 13.8 121 6-147 8-128 (141)
137 PRK10504 putative transporter; 98.0 0.00045 9.8E-09 71.2 18.8 130 231-369 30-159 (471)
138 PRK03699 putative transporter; 98.0 0.00048 1E-08 69.5 18.5 126 229-363 25-150 (394)
139 PRK10213 nepI ribonucleoside t 98.0 0.00052 1.1E-08 69.5 18.8 126 233-369 42-169 (394)
140 TIGR00924 yjdL_sub1_fam amino 98.0 0.00035 7.6E-09 72.8 17.5 153 231-392 30-189 (475)
141 TIGR00712 glpT glycerol-3-phos 97.9 0.00038 8.3E-09 71.3 16.8 121 236-361 51-171 (438)
142 TIGR00890 2A0111 Oxalate/Forma 97.9 0.00068 1.5E-08 66.5 17.5 118 232-359 24-141 (377)
143 TIGR00806 rfc RFC reduced fola 97.9 0.023 5E-07 59.0 28.4 110 5-137 71-180 (511)
144 TIGR00903 2A0129 major facilit 97.9 0.00072 1.6E-08 68.0 17.5 126 233-368 13-138 (368)
145 PRK14995 methyl viologen resis 97.9 0.0012 2.6E-08 68.9 19.5 137 234-380 29-167 (495)
146 TIGR00880 2_A_01_02 Multidrug 97.9 0.00041 8.9E-09 57.7 13.1 114 251-373 3-116 (141)
147 PRK11195 lysophospholipid tran 97.9 0.0005 1.1E-08 69.6 16.0 122 236-369 28-149 (393)
148 PRK09874 drug efflux system pr 97.9 0.0011 2.4E-08 66.5 18.4 127 231-367 34-165 (408)
149 PRK12307 putative sialic acid 97.8 0.0012 2.6E-08 66.9 18.6 132 239-379 46-177 (426)
150 KOG2504 Monocarboxylate transp 97.8 0.0053 1.2E-07 64.5 23.7 351 10-394 95-476 (509)
151 PRK03893 putative sialic acid 97.8 0.0011 2.4E-08 68.7 18.5 135 236-379 45-179 (496)
152 PRK15402 multidrug efflux syst 97.8 0.0015 3.1E-08 66.0 18.7 124 234-366 36-159 (406)
153 PRK09705 cynX putative cyanate 97.8 0.001 2.2E-08 67.2 17.6 124 231-364 29-152 (393)
154 TIGR00886 2A0108 nitrite extru 97.8 0.0017 3.7E-08 64.0 18.4 120 230-358 20-140 (366)
155 PRK10133 L-fucose transporter; 97.8 0.0014 3.1E-08 67.4 18.4 126 233-364 48-173 (438)
156 TIGR00896 CynX cyanate transpo 97.8 0.0013 2.9E-08 65.0 17.1 124 230-364 19-142 (355)
157 PRK09556 uhpT sugar phosphate 97.8 0.00035 7.5E-09 72.3 13.2 143 216-363 35-177 (467)
158 PRK11043 putative transporter; 97.8 0.0022 4.7E-08 64.6 18.7 124 237-369 32-155 (401)
159 KOG0254 Predicted transporter 97.7 0.032 6.9E-07 58.6 27.9 121 238-360 322-447 (513)
160 PRK09528 lacY galactoside perm 97.7 0.0009 1.9E-08 68.0 15.1 77 207-284 6-84 (420)
161 PF05977 MFS_3: Transmembrane 97.7 0.0014 3.1E-08 69.1 16.8 174 208-386 7-182 (524)
162 TIGR01299 synapt_SV2 synaptic 97.7 0.0027 5.7E-08 69.7 18.8 116 237-361 193-308 (742)
163 PRK08633 2-acyl-glycerophospho 97.6 0.0015 3.3E-08 74.9 17.2 121 241-367 40-162 (1146)
164 PRK15462 dipeptide/tripeptide 97.6 0.0032 7E-08 65.8 18.1 153 232-392 30-186 (493)
165 KOG0255 Synaptic vesicle trans 97.6 0.13 2.8E-06 53.9 31.2 313 7-367 129-465 (521)
166 PRK11273 glpT sn-glycerol-3-ph 97.6 0.0028 6.2E-08 65.2 17.1 114 236-356 53-168 (452)
167 TIGR00879 SP MFS transporter, 97.6 0.0028 6.1E-08 64.1 16.5 131 243-379 68-201 (481)
168 PRK15403 multidrug efflux syst 97.6 0.0058 1.3E-07 62.3 18.7 122 237-367 42-163 (413)
169 PRK11902 ampG muropeptide tran 97.6 0.004 8.6E-08 62.9 17.4 127 233-367 21-153 (402)
170 TIGR00894 2A0114euk Na(+)-depe 97.5 0.0017 3.7E-08 66.9 14.3 121 240-367 70-190 (465)
171 TIGR00901 2A0125 AmpG-related 97.5 0.006 1.3E-07 60.2 17.5 126 233-366 10-141 (356)
172 PLN00028 nitrate transmembrane 97.5 0.007 1.5E-07 62.9 18.7 110 235-356 60-171 (476)
173 TIGR00899 2A0120 sugar efflux 97.5 0.0079 1.7E-07 59.4 18.0 52 230-281 16-68 (375)
174 PRK15011 sugar efflux transpor 97.4 0.014 3E-07 58.9 18.8 51 230-281 34-86 (393)
175 PRK10077 xylE D-xylose transpo 97.4 0.0058 1.3E-07 62.9 16.4 122 241-363 50-175 (479)
176 TIGR00806 rfc RFC reduced fola 97.4 0.01 2.2E-07 61.5 17.3 149 234-392 48-200 (511)
177 TIGR00887 2A0109 phosphate:H+ 97.3 0.01 2.2E-07 62.0 16.9 120 242-364 52-171 (502)
178 PRK06814 acylglycerophosphoeth 97.3 0.014 3.1E-07 67.1 19.4 116 246-367 52-167 (1140)
179 KOG4332 Predicted sugar transp 97.3 0.03 6.4E-07 53.7 17.6 141 195-347 232-383 (454)
180 PRK15034 nitrate/nitrite trans 97.2 0.027 5.9E-07 58.4 19.1 117 230-355 53-174 (462)
181 PRK09584 tppB putative tripept 97.2 0.021 4.6E-07 59.9 18.5 142 231-380 41-186 (500)
182 TIGR00898 2A0119 cation transp 97.2 0.0065 1.4E-07 63.2 14.5 121 239-368 117-240 (505)
183 TIGR00889 2A0110 nucleoside tr 97.2 0.0085 1.8E-07 61.2 14.6 123 6-145 261-390 (418)
184 KOG0569 Permease of the major 97.1 0.023 5E-07 59.1 17.2 127 249-381 63-191 (485)
185 PRK10207 dipeptide/tripeptide 97.1 0.026 5.6E-07 59.1 17.6 150 233-392 36-191 (489)
186 COG3104 PTR2 Dipeptide/tripept 97.1 0.22 4.9E-06 51.6 23.7 355 13-392 78-485 (498)
187 TIGR00882 2A0105 oligosacchari 97.1 0.023 4.9E-07 57.2 16.2 57 229-285 20-77 (396)
188 PRK11128 putative 3-phenylprop 97.1 0.02 4.3E-07 57.4 15.7 66 210-276 4-69 (382)
189 TIGR00892 2A0113 monocarboxyla 97.0 0.02 4.4E-07 59.1 15.2 119 234-364 42-163 (455)
190 PRK11010 ampG muropeptide tran 96.9 0.073 1.6E-06 55.6 18.9 130 232-369 33-168 (491)
191 PTZ00207 hypothetical protein; 96.9 0.047 1E-06 58.4 17.4 116 238-358 54-169 (591)
192 PRK10406 alpha-ketoglutarate t 96.8 0.091 2E-06 53.7 18.2 119 242-362 56-178 (432)
193 TIGR00792 gph sugar (Glycoside 96.8 0.019 4.2E-07 58.2 13.1 121 237-360 26-152 (437)
194 COG2814 AraJ Arabinose efflux 96.6 0.15 3.3E-06 51.7 18.0 116 231-355 33-148 (394)
195 TIGR01301 GPH_sucrose GPH fami 96.6 0.041 8.8E-07 57.4 14.3 126 233-366 26-174 (477)
196 KOG0254 Predicted transporter 96.6 0.062 1.4E-06 56.4 15.5 140 246-394 89-230 (513)
197 PF00083 Sugar_tr: Sugar (and 96.6 1.1E-06 2.5E-11 89.9 -20.0 121 239-363 281-404 (451)
198 TIGR02718 sider_RhtX_FptX side 96.5 0.064 1.4E-06 53.8 14.6 116 13-143 261-377 (390)
199 COG2271 UhpC Sugar phosphate p 96.5 0.028 6.1E-07 57.0 11.4 181 201-393 20-205 (448)
200 PRK15075 citrate-proton sympor 96.5 0.17 3.7E-06 51.6 17.5 124 234-360 38-169 (434)
201 TIGR00805 oat sodium-independe 96.4 0.026 5.7E-07 61.0 11.6 134 234-367 56-231 (633)
202 TIGR00902 2A0127 phenyl propri 96.4 0.14 3.1E-06 51.2 16.3 47 230-276 23-69 (382)
203 PF06609 TRI12: Fungal trichot 96.3 0.16 3.4E-06 54.4 16.6 133 207-350 36-172 (599)
204 PRK10429 melibiose:sodium symp 96.3 0.11 2.4E-06 53.9 15.0 123 234-359 29-158 (473)
205 TIGR00883 2A0106 metabolite-pr 96.2 0.15 3.2E-06 50.2 14.9 119 243-364 27-152 (394)
206 KOG2563 Permease of the major 96.1 1.6 3.4E-05 45.0 21.6 192 200-399 255-456 (480)
207 PRK09952 shikimate transporter 96.0 0.28 6.1E-06 50.2 16.4 116 242-360 56-177 (438)
208 KOG3626 Organic anion transpor 95.9 0.36 7.8E-06 52.6 16.9 81 196-276 377-459 (735)
209 PRK10642 proline/glycine betai 95.8 0.57 1.2E-05 48.7 17.9 101 252-355 63-165 (490)
210 PF06813 Nodulin-like: Nodulin 95.8 1.1 2.5E-05 42.6 18.0 146 233-383 20-170 (250)
211 PRK09669 putative symporter Ya 95.7 0.15 3.2E-06 52.3 12.8 121 234-358 33-160 (444)
212 COG0738 FucP Fucose permease [ 95.7 0.65 1.4E-05 47.0 16.7 130 229-364 31-160 (422)
213 PTZ00207 hypothetical protein; 95.6 2.1 4.7E-05 45.9 21.3 116 11-144 76-192 (591)
214 KOG2532 Permease of the major 95.5 0.25 5.3E-06 51.5 13.6 115 240-361 67-181 (466)
215 PF12832 MFS_1_like: MFS_1 lik 95.5 0.055 1.2E-06 41.8 6.5 51 233-283 22-72 (77)
216 PF03137 OATP: Organic Anion T 95.4 0.004 8.7E-08 65.9 0.0 80 196-276 290-372 (539)
217 KOG0253 Synaptic vesicle trans 95.4 3.6 7.9E-05 41.7 20.8 129 255-394 390-519 (528)
218 PF01306 LacY_symp: LacY proto 95.3 0.096 2.1E-06 53.5 9.3 68 216-284 13-81 (412)
219 PF01770 Folate_carrier: Reduc 95.2 4.2 9.2E-05 41.6 28.6 234 7-275 52-314 (412)
220 TIGR00769 AAA ADP/ATP carrier 95.2 4.9 0.00011 42.0 33.6 171 95-283 157-340 (472)
221 COG2223 NarK Nitrate/nitrite t 94.9 0.4 8.6E-06 48.7 12.3 115 238-360 41-156 (417)
222 PF06779 DUF1228: Protein of u 94.7 0.14 2.9E-06 40.5 6.7 54 232-285 13-66 (85)
223 COG2807 CynX Cyanate permease 94.6 1.6 3.5E-05 43.8 15.4 141 240-392 41-181 (395)
224 PF11700 ATG22: Vacuole efflux 94.5 0.62 1.3E-05 48.7 13.2 136 2-151 323-462 (477)
225 KOG1330 Sugar transporter/spin 94.3 0.054 1.2E-06 55.5 4.6 121 240-369 62-182 (493)
226 KOG0255 Synaptic vesicle trans 93.9 1.1 2.4E-05 46.9 13.9 120 240-369 112-231 (521)
227 PRK11462 putative transporter; 93.9 2.5 5.4E-05 43.8 16.2 120 234-357 33-159 (460)
228 PRK09848 glucuronide transport 93.8 1.8 3.9E-05 44.3 15.0 112 236-351 33-153 (448)
229 KOG4686 Predicted sugar transp 93.2 4.6 0.0001 39.5 15.1 148 211-372 264-416 (459)
230 PF03825 Nuc_H_symport: Nucleo 93.0 6.1 0.00013 40.3 17.1 49 230-278 21-69 (400)
231 KOG2325 Predicted transporter/ 93.0 2.2 4.7E-05 44.6 13.7 74 319-392 399-472 (488)
232 PF13347 MFS_2: MFS/sugar tran 92.5 0.3 6.5E-06 49.8 6.8 122 234-358 25-154 (428)
233 KOG3762 Predicted transporter 92.5 4.1 8.8E-05 43.0 14.8 139 234-382 394-535 (618)
234 COG2211 MelB Na+/melibiose sym 92.5 2.2 4.8E-05 44.3 13.1 157 234-394 36-204 (467)
235 PF03209 PUCC: PUCC protein; 90.5 12 0.00027 38.0 15.7 90 315-404 96-187 (403)
236 PF00083 Sugar_tr: Sugar (and 90.3 0.005 1.1E-07 62.9 -9.1 119 245-369 45-163 (451)
237 PF05631 DUF791: Protein of un 88.9 17 0.00037 36.5 15.0 122 234-364 55-183 (354)
238 KOG2504 Monocarboxylate transp 88.4 3.2 7E-05 43.8 10.2 134 238-380 73-207 (509)
239 TIGR00788 fbt folate/biopterin 88.3 14 0.0003 38.3 14.9 105 236-349 50-160 (468)
240 KOG3764 Vesicular amine transp 86.9 6 0.00013 40.4 10.4 146 240-394 100-248 (464)
241 COG2270 Permeases of the major 86.8 2.9 6.2E-05 42.8 8.2 118 2-140 294-412 (438)
242 TIGR01272 gluP glucose/galacto 86.0 13 0.00028 36.2 12.4 109 9-141 191-299 (310)
243 KOG0253 Synaptic vesicle trans 83.8 5.9 0.00013 40.2 8.6 92 14-126 399-490 (528)
244 PF05978 UNC-93: Ion channel r 81.9 35 0.00077 30.0 14.4 88 258-355 49-136 (156)
245 KOG3574 Acetyl-CoA transporter 80.6 69 0.0015 32.9 14.7 64 205-269 259-323 (510)
246 KOG2325 Predicted transporter/ 79.1 60 0.0013 34.1 14.5 160 230-394 53-229 (488)
247 KOG3762 Predicted transporter 78.2 4.1 8.8E-05 43.0 5.6 52 233-284 33-84 (618)
248 TIGR00926 2A1704 Peptide:H+ sy 77.8 1.1E+02 0.0025 33.3 16.8 55 231-288 7-66 (654)
249 KOG2615 Permease of the major 77.1 19 0.00042 36.6 9.7 116 241-369 63-181 (451)
250 PF03219 TLC: TLC ATP/ADP tran 74.2 1.2E+02 0.0026 31.9 24.1 83 199-282 268-355 (491)
251 KOG2533 Permease of the major 73.2 65 0.0014 33.9 13.1 128 228-364 57-190 (495)
252 COG0477 ProP Permeases of the 72.4 74 0.0016 28.6 14.0 115 6-138 49-166 (338)
253 COG3104 PTR2 Dipeptide/tripept 70.8 47 0.001 34.8 11.1 160 228-397 38-206 (498)
254 KOG0252 Inorganic phosphate tr 65.2 12 0.00027 38.9 5.5 158 234-394 66-243 (538)
255 TIGR00769 AAA ADP/ATP carrier 63.9 1.9E+02 0.0042 30.2 17.7 122 244-368 41-189 (472)
256 KOG4686 Predicted sugar transp 61.4 56 0.0012 32.2 8.9 106 7-134 311-416 (459)
257 COG3263 NhaP-type Na+/H+ and K 60.8 1.8E+02 0.0038 30.3 12.5 104 251-376 193-297 (574)
258 KOG0637 Sucrose transporter an 55.3 2.7E+02 0.0057 29.3 13.0 37 85-127 164-200 (498)
259 PF12832 MFS_1_like: MFS_1 lik 47.0 17 0.00037 27.8 2.4 27 5-31 44-70 (77)
260 PF13955 Fst_toxin: Toxin Fst, 43.6 23 0.00049 20.2 1.9 17 118-134 2-18 (21)
261 PF03092 BT1: BT1 family; Int 40.2 4.2E+02 0.0092 27.1 14.3 137 235-377 13-158 (433)
262 KOG3810 Micronutrient transpor 37.5 4.6E+02 0.01 26.7 14.8 252 91-369 118-384 (433)
263 PF06813 Nodulin-like: Nodulin 36.7 3.8E+02 0.0082 25.4 11.3 81 3-90 44-124 (250)
264 PRK03612 spermidine synthase; 36.5 5.4E+02 0.012 27.2 15.7 33 240-272 44-76 (521)
265 PF03137 OATP: Organic Anion T 34.9 13 0.00027 39.6 -0.1 134 234-367 26-200 (539)
266 KOG0637 Sucrose transporter an 30.9 74 0.0016 33.2 4.7 139 234-379 55-216 (498)
267 COG0477 ProP Permeases of the 30.6 3.9E+02 0.0084 23.7 13.3 112 234-352 25-139 (338)
268 TIGR00926 2A1704 Peptide:H+ sy 30.3 7.6E+02 0.016 27.0 24.1 48 103-150 121-175 (654)
269 PF03839 Sec62: Translocation 28.5 1.4E+02 0.003 28.0 5.6 28 245-272 107-134 (224)
270 PF00854 PTR2: POT family; In 21.9 7.6E+02 0.017 24.2 12.1 72 319-392 46-120 (372)
271 PF13940 Ldr_toxin: Toxin Ldr, 21.0 1.6E+02 0.0035 18.9 3.1 26 247-272 5-34 (35)
272 PRK03612 spermidine synthase; 20.9 1E+03 0.022 25.2 14.2 44 104-147 143-187 (521)
No 1
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=3.3e-74 Score=581.77 Aligned_cols=380 Identities=35% Similarity=0.520 Sum_probs=328.3
Q ss_pred chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHH
Q 015174 2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS--SSMLLHPWFFVLVLAGAVERLT 79 (412)
Q Consensus 2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~g~~~~l~ 79 (412)
||++++..++|||.+|+|+||.||+|+++.+.++||.++++||..+..++...+.. +++....+++++++++++++++
T Consensus 44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La 123 (432)
T PF06963_consen 44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA 123 (432)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999997655555433221 2345567899999999999999
Q ss_pred hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWF 159 (412)
Q Consensus 80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 159 (412)
++++++++||||+++++++|+ ++|+++|++|||||++||++||++.|+++++.|++.++++++++|++|+++|+.++..
T Consensus 124 s~~~~iavERDWVvvi~~~~~-~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~ 202 (432)
T PF06963_consen 124 SIANTIAVERDWVVVIAGGDP-GALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLAR 202 (432)
T ss_pred HhhhhheeccchhhhhcCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997654 5999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhccccccccccccccccCCCCC------CCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015174 160 TNKISSGVLDRAKCSQSCCRTSNE------GPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL 233 (412)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~ 233 (412)
+|+.-+ .++.+++.+++++++++ ++.++..+..++..+.+++||+.|+|||+|+++++++++|+| +++||++
T Consensus 203 VY~~~P-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~alalLY~T-VLsf~~l 280 (432)
T PF06963_consen 203 VYNSVP-ALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFALALLYFT-VLSFGGL 280 (432)
T ss_pred HHHhCh-HhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHHHHHHHHH-HhcCcHH
Confidence 754322 33322222111111110 111222333455677888999999999999999999999999 6999999
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFFL 312 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~~ 312 (412)
++.|++++|+|+..+|.+|+.+++.|++||+++|++.||+|..|+|.|++++|..|+.+++..+|. +++.+..+..+++
T Consensus 281 mt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~ 360 (432)
T PF06963_consen 281 MTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLL 360 (432)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999987775 4321245677788
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSV 384 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v 384 (412)
.|+++||+|||+||++++|++||.|||++||++||+|+|+|+.+|++++++++++|+|++|++++++|+++|
T Consensus 361 ~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~~lv~iS~~~V 432 (432)
T PF06963_consen 361 GGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFGWLVLISVAAV 432 (432)
T ss_pred HHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcChHHHhhheeC
Confidence 899999999999999999999999999999999999999999999999999999999999999999998764
No 2
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-56 Score=426.97 Aligned_cols=390 Identities=22% Similarity=0.295 Sum_probs=325.3
Q ss_pred chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--ccccchhHHHHHHHHHHHHHHHHH
Q 015174 2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIP--TSSSMLLHPWFFVLVLAGAVERLT 79 (412)
Q Consensus 2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~--~~~~~~~~~l~~~~~~~g~~~~l~ 79 (412)
|++.....+++|+.+|.|+|+.+|+|+++...+.||+++.++.+.+...+.+.+ ..++.....+++.+.+.+++.+++
T Consensus 69 glvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~La 148 (503)
T KOG2601|consen 69 GLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLA 148 (503)
T ss_pred HHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHH
Confidence 567788999999999999999999999999999999999988765555544331 111112234566677899999999
Q ss_pred hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWF 159 (412)
Q Consensus 80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 159 (412)
+.+.++.++|||++++.++++++.++++|+.+|++|+.+|+++|+..|+++++.+.+....+.++|+.+|+++++.+++.
T Consensus 149 s~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~vsm~~ey~ll~~ 228 (503)
T KOG2601|consen 149 SLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALVSMWVEYWLLIS 228 (503)
T ss_pred HhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999998777677899999999999999999999999999999999998888899999999999988877
Q ss_pred hh-hccccccccccccc-----------cccCCCCC----------CCCCCchh----hhHHhHHHHHHhHHHHhcCCcc
Q 015174 160 TN-KISSGVLDRAKCSQ-----------SCCRTSNE----------GPVPDADN----IVDVGIEAIKLGWKEYMQQPVL 213 (412)
Q Consensus 160 ~~-~~~~~~l~~~~~~~-----------~~~~~~~~----------~~~~~~~~----~~~~~~~~~~~g~~~~~~~~v~ 213 (412)
+| ..| .++..+.++ ..|.++-+ ...++... .-+...+.-+.+|+.|++||++
T Consensus 229 vy~g~p--alavs~~~k~~rs~~~q~~~~~~~~s~~v~~~~s~~~~~~~~~~~~~~~~l~~~~~~sF~~~w~~y~nq~vv 306 (503)
T KOG2601|consen 229 VYIGVP--ALAVSKGRKNLRSKESQVELRDCQSSFPVAGTHSEGFMTNLASRYGILVILPRFSISSFRSAWRVYFNQEVV 306 (503)
T ss_pred HHhCCc--HHhhhcchhhhhhhhheeeeecCCcccccccccceeeeccccccCccccccchhhhHHHHhHHHhhccCeee
Confidence 64 333 221111110 00100000 00000000 0012345667899999999999
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Q 015174 214 PASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA 293 (412)
Q Consensus 214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~ 293 (412)
.++.+.+++|++ +++|+.+++.|+...|.|-...|+.++..+..|+.+++.++...+|.++.|++.|..+.|..
T Consensus 307 l~g~slallf~t-vl~f~~L~t~~~~~~G~p~~i~gi~~g~Sa~tg~~~tv~~~~~~~~~nl~rtg~ws~~sq~s----- 380 (503)
T KOG2601|consen 307 LPGVSLALLFFT-VLGFGVLMTATLFWPGSPMYIIGIGRGISAGTGLAATVHYPLMQSRTNLLRTGLWSFWSQDS----- 380 (503)
T ss_pred ehhhHHHHHHHH-HHhhheeeeeeeecCCCCceehhhccCcchhhhhhhhhhcccccCccCCCcceehhhccccc-----
Confidence 999999999999 69999999999999999999999999999999999999999999999999999998776543
Q ss_pred HHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 015174 294 VAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHF 373 (412)
Q Consensus 294 v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f 373 (412)
. +..+..+++.|++.+|+|||+||++++|++|+.+||++|+.++|+|+|+|+.++++++++++++|+|.+|
T Consensus 381 -------v--~~isv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F 451 (503)
T KOG2601|consen 381 -------V--SKISVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDF 451 (503)
T ss_pred -------c--hhHHHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCccce
Confidence 1 2456777888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCccCCcccccCCC
Q 015174 374 GFLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSFDPQ 411 (412)
Q Consensus 374 ~~l~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (412)
+++.++|+++|.+|+.+|.+|..|.| .|.+|+|++
T Consensus 452 ~iltliS~~fVs~g~m~y~~~l~q~~---~~~~hl~~~ 486 (503)
T KOG2601|consen 452 GILTLISFSFVSLGHMFYTFYLAQIR---SHNFHLEKI 486 (503)
T ss_pred eeeeeehhhHhhhhhhhhhhhhhhcc---ccccchhcC
Confidence 99999999999999999999988877 789999875
No 3
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=1.5e-30 Score=271.38 Aligned_cols=346 Identities=16% Similarity=0.083 Sum_probs=246.5
Q ss_pred hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015174 3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA 82 (412)
Q Consensus 3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a 82 (412)
.+.++|.+++++++|.++||+||||+|+.+|+.+.+..++.+ ++...+.. ..+.++...++.|+.+.+.+.+
T Consensus 52 ~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~--~l~~~~~~------~~~~Ll~~~fl~g~~~a~~~PA 123 (524)
T PF05977_consen 52 AASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA--VLAFFGLL------SPWLLLILTFLLGIGSAFFNPA 123 (524)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH--HHHHhCcC------CHHHHHHHHHHHHHHHHHHHHH
Confidence 577999999999999999999999999999999876544322 23333322 1245677788999999999988
Q ss_pred hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015174 83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNK 162 (412)
Q Consensus 83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~ 162 (412)
.+..++ .+++++ ++.++|+.......++.++||.+||.+++.+|...+|++ |++++......+..+
T Consensus 124 ~~A~ip-----~lV~~~---~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~i----nalsfl~~i~~l~~~-- 189 (524)
T PF05977_consen 124 WQAIIP-----ELVPKE---DLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLI----NALSFLISILALLRW-- 189 (524)
T ss_pred HHHHHH-----HhccHh---hHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHc--
Confidence 887554 388864 899999999999999999999999999999998887765 444544333222222
Q ss_pred ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hc
Q 015174 163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QR 241 (412)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~ 241 (412)
+++. ++++ .+ + ++..+++++|+|++.++|.++..+..+.++......+..+++.|.+ ++
T Consensus 190 -~~~~--~~~~------------~~--~---e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l 249 (524)
T PF05977_consen 190 -KPPP--PPSS------------LP--R---ERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVL 249 (524)
T ss_pred -cccc--cccc------------cc--h---hhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh
Confidence 1100 0000 00 1 2457889999999999999998777666662212344556777887 48
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
|.++..||++.++.++|+++|+++.+++.+|++..+....+......+... ..+.+ + ..+....+++.+.+
T Consensus 250 ~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~--lal~~-~------~~~~~~~l~l~G~~ 320 (524)
T PF05977_consen 250 GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLL--LALSP-S------FWLALIALFLAGAA 320 (524)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHH--Hhcch-H------HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988776655432221111 11111 1 11111223333444
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcCCC
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPT 399 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~~~ 399 (412)
.-..+...+..+|+.+|++.|||++++++++.++ +.+...+.+.+...-+.-..+.+.+++.+.++.+.+....++.+
T Consensus 321 ~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~l~~~~ 399 (524)
T PF05977_consen 321 WIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFPLRQGE 399 (524)
T ss_pred HHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 4457778889999999999999999999999988 66667777777766666666666665555666666666655543
No 4
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=5.4e-21 Score=193.35 Aligned_cols=341 Identities=18% Similarity=0.083 Sum_probs=208.0
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..+|..+++++.|.+.||++|||++..+++.+.+...+ + .+.. . . ++.-++.|..+.....+.
T Consensus 46 ~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~-~-----~~~~-------~--~-~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 46 FFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLL-M-----LFGI-------H--P-LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred HHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHH-H-----HHHH-------H--H-HHHHHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999887554221 1 1111 0 1 222234566565555444
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
. ++.+| +++++ ++.++|+.+....+.+.++||.+||.+.+.. |+..+.+.....+.+. + ....+
T Consensus 110 ~-a~i~~----~~~~~---~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~~~~~i~~~~~~~~~----~---~~~~l 173 (393)
T PRK11195 110 Y-GILTE----LLPGE---KLVKANGWMEGSTIAAILLGTVLGGALADPH-AEAALAVCALIYLLAA----L---FNLFI 173 (393)
T ss_pred H-HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH----H---HHhcC
Confidence 3 33345 67753 8999999999999999999999999999854 5544433222222111 1 11234
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG 242 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g 242 (412)
||++. +++. .+.+ . ....++..++++.+++||.++..+....++.............|.+ .+|
T Consensus 174 ~~~~~--~~~~----------~~~~-~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 237 (393)
T PRK11195 174 PRLGA--RRPG----------QSWN-P---IALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALG 237 (393)
T ss_pred CCCcc--cccc----------cCCC-H---HHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44111 1110 0001 0 1235566788999999999887655433331101222233445665 489
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH 322 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL 322 (412)
.|+.++|.+.+..++++++|+++.+++.+|.+.++....+... ......... ..+ ........++.+++.
T Consensus 238 ~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~~---~~~~~~~~~-~~~------~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 238 ITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGILM---GLVVLLMAL-QHS------LLPAYPLLILIGALG 307 (393)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHH---HHHHHHHHH-HhH------HHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998887776655322 111111111 111 111111222223344
Q ss_pred hhhhhhhhHHhhccCCccc-chhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 015174 323 MSYDIVGAQILQTGIPSSK-ANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLNPTDE 401 (412)
Q Consensus 323 w~~dl~~~~l~Q~~vp~~~-~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~~~~~ 401 (412)
..++...+...|+..|++. +|++.|+.+..++....+...+......-+-.+..++...+. ....++-..| |.-|+.
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~ 385 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLVKLGVPVVAVIVGFGL-LVALAMALLW-RWHRRN 385 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH-HHHHHHHHHH-HHHHhc
Confidence 4577778888999877765 799999999999987666666655554444444444444443 3444444455 322444
Q ss_pred CCc
Q 015174 402 QRS 404 (412)
Q Consensus 402 ~~~ 404 (412)
||+
T Consensus 386 ~~~ 388 (393)
T PRK11195 386 QRQ 388 (393)
T ss_pred ccc
Confidence 664
No 5
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=4.4e-19 Score=201.86 Aligned_cols=319 Identities=13% Similarity=-0.008 Sum_probs=203.2
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..+|++++++++|.++||++||++|+..+....+..+... . .+... ..+.+++..++.|..+..+..+.
T Consensus 60 ~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~---~-~~~~~------s~~~l~~~~~l~gi~~a~~~p~~ 129 (1140)
T PRK06814 60 VFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAI---Y-GFHLN------SVPLLFAALFLMGIHSALFGPIK 129 (1140)
T ss_pred HHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHH---H-HHHHh------hHHHHHHHHHHHHHHHHhhchHH
Confidence 56789999999999999999999998887766554433211 1 11111 12356666677788777776554
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
. ++.+| +++++ ++.++|+.++....++.++||.++|.++...+|+..+++.....+..+. ...++
T Consensus 130 ~-a~l~~----~~~~~---~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 194 (1140)
T PRK06814 130 Y-SILPD----HLNKD---ELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWL-------ASLFI 194 (1140)
T ss_pred H-HhhHh----hcCcc---ccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-------HHhhC
Confidence 4 44456 56654 7999999999999999999999999999999999876322222222111 11233
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh-c
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ-R 241 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~-~ 241 (412)
++...+ +++. ..+ ....++..++++..+++|.++..... ...++. ...+....+.|+++ +
T Consensus 195 ~~~~~~-~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~ 256 (1140)
T PRK06814 195 PKTGNA-APDL-----------KID-----RNIIRSTITLLKYAKADKRIWLAILGISWFWLV-GAVVLSQLPLLAKETL 256 (1140)
T ss_pred CCCCCC-CCCC-----------eec-----cchHHHHHHHHHHHhcCchHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHc
Confidence 331110 0000 000 12245667899999999998885443 333332 23344457778875 7
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHh-cC-CC-cC----------cchH
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYW-SG-SL-SQ----------QNPL 308 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~-~g-~~-~~----------~~~~ 308 (412)
|.++..+|++.+..++++++|+++.+++.+|.+..+...++.....++.... .+. .. .. .. ....
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDL--AFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHH--Hhcccccccccccccchhhhhccccc
Confidence 9999999999999999999999999999988776665444433222211111 111 00 00 00 0011
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
..+..+.++.+++...+......+.|+.+|++++||+.|+.++++++...+...++...
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 11112222334455567788999999999999999999999999987544444443333
No 6
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.85 E-value=1.5e-18 Score=176.18 Aligned_cols=336 Identities=13% Similarity=0.017 Sum_probs=205.5
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
...++.++.+++.|.+.||++|||++..+.+........... . .+...+ ..+.+++..++.|....+...+.
T Consensus 60 ~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~--~-~~~~~~-----~~~~l~~~~~~~g~~~~~~~~~~ 131 (417)
T PRK10489 60 LTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL--N-AFLPEP-----SLLAIYLLGLWDGFFGSLGVTAL 131 (417)
T ss_pred HHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH--H-HHcCCC-----cHHHHHHHHHHHHHHHHHHHHHH
Confidence 456888999999999999999999988877655443221110 0 111111 11234444445565555554444
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
+. +++..++++ +..++|+.......++..+||.++|.+....+|+..+++......+.. + ...++
T Consensus 132 ~~-----~~~~~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~----~---~~~~l 196 (417)
T PRK10489 132 LA-----ATPALVGRE---NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITL----L---PLLRL 196 (417)
T ss_pred hh-----hhhhccCHH---HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHH----H---HHHhC
Confidence 33 233356543 788999999999999999999999999998899887755333222221 1 12244
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RG 242 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~g 242 (412)
|+... +++. + ++..++..++++..++||.++..+.....+.. ...+....+.|.++ +|
T Consensus 197 ~~~~~--~~~~----------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g 255 (417)
T PRK10489 197 PALPP--PPQP----------R--------EHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQ 255 (417)
T ss_pred CCCCC--CCcc----------c--------ccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccC
Confidence 43111 1100 0 01134456789999999988775554444322 23344556678876 89
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH 322 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL 322 (412)
+++...|++.+..+++.++|.++.+++.+|.+..+....+......... ....... ... ...+....+++.
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~----~~~--~~~~~~~~g~~~ 326 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVG---LFGLMPM----WIL--AVLCLALFGYLS 326 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHH---HHHccch----HHH--HHHHHHHHHHHH
Confidence 9999999999999999999999999999987776666655432221111 1111111 111 111222223333
Q ss_pred hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH-HHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015174 323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIANDVSHFGFLATLSLLSVVGAAWMFC 392 (412)
Q Consensus 323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~-~~~~~~~~~f~~l~~~s~~~v~~~~~~~~ 392 (412)
-..+.....+.|+.+|++.||+++|+.++.++....+...+ +.+....+........+.+.+..+..++.
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 23455566788999999999999999999998744444444 45555445555555555554454554444
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.84 E-value=6.9e-18 Score=165.93 Aligned_cols=316 Identities=15% Similarity=0.098 Sum_probs=198.9
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..++.++.+++.|.+.||++|||++..+.+...+...+. .+.....+ . ..+.+++..++.|........+.
T Consensus 42 ~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~~~~~~~l~g~~~~~~~~~~ 113 (365)
T TIGR00900 42 AGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL----PFVALLGG--L--NIWQVYVLAGILAIAQAFFTPAY 113 (365)
T ss_pred HHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH----HHHHHcCC--C--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888999999999999999999888876554332211 11111110 0 11334555556666666555544
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
.. +..| +++++ +..+.|+..+....++.++||.++|.+.+..+|+..+++.+....++.. ....+ +.
T Consensus 114 ~~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~-~~ 180 (365)
T TIGR00900 114 QA-MLPD----LVPEE---QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISAL----LIVSV-RI 180 (365)
T ss_pred HH-HHHh----cCCHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH----HHHhc-cc
Confidence 33 3334 66643 7899999999999999999999999999999999887654433333221 11111 22
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccc-hHHHHHHHh-c
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPG-SLMTAFLTQ-R 241 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~-~~~~~y~~~-~ 241 (412)
||+ ++ ++. + + .+ ++..++..++++..+|+|.++..+....++........ ...+.|.++ +
T Consensus 181 ~~~--~~-~~~-----~----~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 181 PEL--AA-SEI-----Q----A-LS-----NAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred ccC--CC-ccc-----c----c-cc-----hhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 221 00 000 0 0 00 12234567789999999988875555444421112222 345566665 8
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
|.++.+.|.+.+..+++.++++++.+++.||.|+++....+......+... ..+.. + + ...+....+..+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-~----~~~~~~~~~~~g~~ 314 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILV--VGLTP-P-N----FPLFLVLWFAIGVG 314 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHH--HHhhc-h-h----HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988776554322221111 11111 1 0 11111122222334
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII 366 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~ 366 (412)
.-........+.|+.+|+++||++.|..++.++....+...++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~ 359 (365)
T TIGR00900 315 YGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGP 359 (365)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 434566778889999999999999999999999877666655443
No 8
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.80 E-value=7.3e-16 Score=155.87 Aligned_cols=319 Identities=14% Similarity=0.020 Sum_probs=185.2
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++|||++..+.+.-.+. +. ...+... . +.+++.-++.|...........
T Consensus 57 ~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~~~ 123 (406)
T PRK15402 57 YLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILT----CL--AILLAQS------I-EQFTLLRFLQGIGLCFIGAVGY 123 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHhHhhhHHHHHH
Confidence 45677888899999999999999988876533222 21 1111111 1 2334444455555444433333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
..+ .| .++++ +..+.++........+..+||.+++.+.+..+|+.++++.+...+++.. ......|
T Consensus 124 ~~i-~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~------~~~~~~~ 189 (406)
T PRK15402 124 AAI-QE----SFEEA---DAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFF------GLWRAMP 189 (406)
T ss_pred HHH-HH----HhChh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH------HHHHhCC
Confidence 333 34 44543 5778888888888888999999999999999999988765544444331 1112234
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHH-hcC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLT-QRG 242 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~-~~g 242 (412)
|+ . ++++ + +...++..++++..++||.++..... ...++. ...+....+.|.. ++|
T Consensus 190 ~~-~-~~~~--------------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g 247 (406)
T PRK15402 190 ET-A-GRVG--------------E-----KLSLKELGRDYKLVLKNRRFVAGALALGLVSLP-LLAWIALSPVILISGEQ 247 (406)
T ss_pred CC-C-cccc--------------c-----cccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHhC
Confidence 31 1 0000 0 00123456788899999987763332 222221 1223333455654 589
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
+++.++|.......++.++|+.+.+++.+|+|.+|....+...+......... ....+. ... .+..+++...+|
T Consensus 248 ~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~-~~~~~~~~~g~g 322 (406)
T PRK15402 248 LSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSH----AYL-WLTAGLSLYAFG 322 (406)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccc----cHH-HHHHHHHHHHHH
Confidence 99999999988888899999999999999999988877665543322222111 111111 111 111222222223
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc-cCCCchhHHHH
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA-NDVSHFGFLAT 378 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~-~~~~~f~~l~~ 378 (412)
.-..........+. .+|+++|++++..+..++....+...+.... ...+.......
T Consensus 323 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~ 379 (406)
T PRK15402 323 IGLANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLF 379 (406)
T ss_pred HHHHhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHH
Confidence 32222222223332 3569999999999999988665555555544 44444443333
No 9
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.77 E-value=3.7e-15 Score=148.56 Aligned_cols=326 Identities=12% Similarity=0.098 Sum_probs=186.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++..+.+++.|.+.||++||+++..+.+...+... ....... . +.+++..++.|......+....
T Consensus 35 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~------~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~ 101 (377)
T PRK11102 35 YILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAV------ACALAQT------I-DQLIYMRFLHGLAAAAASVVIN 101 (377)
T ss_pred HHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHH------HHHHHcc------H-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788899999999999999998887665433311 1111111 1 2333434445554444444333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
. +..| .++++ +..+.++.......++.+++|.++|.+....+|+..+++.+....+... ......+
T Consensus 102 ~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 167 (377)
T PRK11102 102 A-LMRD----MFPKE---EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAA------LVFFFIP 167 (377)
T ss_pred H-HHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHH------HHHHhCC
Confidence 2 2234 55543 6889999999999999999999999999989999887654444333321 1112233
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHhcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~~gl 243 (412)
|+. +++++ + + ...++..+.++..++||.++.......+.+.....+ ...++.|.+..|+
T Consensus 168 ~~~-~~~~~-----------~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (377)
T PRK11102 168 ETL-PKERR-----------Q-P-------FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGV 227 (377)
T ss_pred ccC-ccccc-----------C-C-------CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCC
Confidence 311 11000 0 0 011223456777888887665333322221100111 1123344556899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|...+..+++++.+..+.+++.+|+|.+|....+...+.............+. + .....+..++.....+.
T Consensus 228 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~- 303 (377)
T PRK11102 228 SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDL-G--FWALVVGVAAFVGCVSM- 303 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhh-h--HHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999887776544433222221111111 0 11111111111111222
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS 383 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~ 383 (412)
.........|+.. |+++|++++..++.++..+.+.........+.+..+....+.++.
T Consensus 304 -~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~ 361 (377)
T PRK11102 304 -ISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLSLAPFTSAWPMVWSMAFCS 361 (377)
T ss_pred -hhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHH
Confidence 2222233455554 489999999999888765554444444445555556555555443
No 10
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.77 E-value=5e-16 Score=154.06 Aligned_cols=301 Identities=16% Similarity=0.038 Sum_probs=181.2
Q ss_pred HHHHHHhhhhhcchhccC-----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015174 6 KLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT 79 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~-----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~ 79 (412)
.+|+.+ ++..|.++||+ +|||. +..+++...+. .. ...+.... . ..+.++...++.+......
T Consensus 32 ~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~----~~--~l~~~~~~--~--~l~~l~~~~~~~~~~~~~~ 100 (356)
T TIGR00901 32 GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL----LL--ILSFLVPS--T--DLPLLAGLAFLIAFFSATQ 100 (356)
T ss_pred HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH----HH--HHHcCCcc--h--hHHHHHHHHHHHHHHHHHH
Confidence 678875 99999999998 57775 56565533222 11 11122111 1 1123444444555555555
Q ss_pred hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------hhHHHHHHHHHHHHHHH
Q 015174 80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--------PVTCLKFAAGLIMWSLP 151 (412)
Q Consensus 80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--------~~~~~~~~~~~~~~s~~ 151 (412)
+.+.+. |++..++++ +..++|+.......++.+++|.+++.+....+ |+..+++.+....+...
T Consensus 101 ~~~~~a-----~~~~~~~~~---~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~ 172 (356)
T TIGR00901 101 DIALDA-----WRLEILSDE---ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLL 172 (356)
T ss_pred HHHHHH-----HHHHhCCHh---hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 555444 444467643 78999999999999999999999999999888 99988654443333221
Q ss_pred HHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc---chHHHHHHHHH-HHhh
Q 015174 152 VMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV---LPASLAYVLLC-LNVV 227 (412)
Q Consensus 152 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v---~~~~~~~a~l~-~t~v 227 (412)
......+|+ +++++. + ++..++..++++..++||. ++.......++ +. .
T Consensus 173 ------~~~~~~~e~--~~~~~~----------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 225 (356)
T TIGR00901 173 ------VTLFLAKEP--QEDASV----------P--------KPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLG-D 225 (356)
T ss_pred ------HHHHhccCC--Cccccc----------c--------hhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-H
Confidence 111112221 000000 0 0112334568888888886 33322222222 21 1
Q ss_pred hccchHHHHHHHhcCCCCchhHHHhhHHH-HHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC--
Q 015174 228 LTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ-- 304 (412)
Q Consensus 228 ~~~~~~~~~y~~~~gls~~~~G~~~~~~a-vggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~-- 304 (412)
.......+.|++++|+++.++|.+.+..+ ++++.|.++.+++.+|+|++|...++...+....... .+.......
T Consensus 226 ~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~ 303 (356)
T TIGR00901 226 SAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGF--VWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH--HHHHhcCcccc
Confidence 23344567788779999999999998655 6889999999999999999888776665443322211 111101000
Q ss_pred --cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH
Q 015174 305 --QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 354 (412)
Q Consensus 305 --~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~ 354 (412)
...........++..++.-....+...++||.+|+++||++.|+..++++
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 00111111223333444445888999999999999999999999998875
No 11
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.76 E-value=2.3e-15 Score=153.35 Aligned_cols=318 Identities=12% Similarity=0.053 Sum_probs=180.9
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA 86 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a 86 (412)
+...+..++.|.+.||++|||++..+.++..+. .. ....... . +.+++.-++.|..+...... ..+
T Consensus 62 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~----~~--~~~~a~~------~-~~l~~~r~l~Gi~~~~~~~~-~~~ 127 (413)
T PRK15403 62 AGGMALQWLLGPLSDRIGRRPVLITGALIFTLA----CA--ATLFTTS------M-TQFLIARFIQGTSICFIATV-GYV 127 (413)
T ss_pred HHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHH----HH--HHHHcCC------H-HHHHHHHHHHHHHHHHHHHH-HHH
Confidence 455677889999999999999988886644332 11 1112211 1 23444445555555433332 234
Q ss_pred hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015174 87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG 166 (412)
Q Consensus 87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~ 166 (412)
+.+| .++++ +..+.++.......++..+||.++|.+.+..||+..|++......+... .....+||.
T Consensus 128 ~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~------~~~~~lp~~ 194 (413)
T PRK15403 128 TVQE----AFGQT---KGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV------GLLLAMPET 194 (413)
T ss_pred HHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH------HHHHhCCCC
Confidence 4555 55543 6889999999999999999999999999989999988765554444331 111234441
Q ss_pred ccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-cCCC
Q 015174 167 VLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLN 244 (412)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls 244 (412)
.+ ++++ + ...++..++|+..+|||.++.......+. .. ...+....+.|+++ .|++
T Consensus 195 -~~-~~~~----------~---------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~-~~~~~~~~P~~l~~~~g~s 252 (413)
T PRK15403 195 -VK-RGAV----------P---------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIP-MMSWVAVSPVILIDAGGMT 252 (413)
T ss_pred -cc-ccCC----------C---------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHH-HHHHHHhChHHHHHhcCCC
Confidence 11 0000 0 01223456888899999888744432222 22 12333334556664 6999
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-HHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA-VAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~-v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
+..+|+.......+++.++.+..++.+|.+..|................ ........ . .....+...+...+.|+
T Consensus 253 ~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~--~-~~~~~~~~~l~~~G~~~- 328 (413)
T PRK15403 253 TSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPH--V-WLWSVLGTSLYAFGIGL- 328 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccc--c-HHHHHHHHHHHHHHHHH-
Confidence 9999999988888999999999998876655555432222222221111 11111111 1 11111111122223344
Q ss_pred hhhhhhh-HHhhccCCcccchhHHHHHHHHHHHHHHHHHHH-HHhccCCCchhHHHHHH
Q 015174 324 SYDIVGA-QILQTGIPSSKANLIGTTEISVASLVESVMLGV-AIIANDVSHFGFLATLS 380 (412)
Q Consensus 324 ~~dl~~~-~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~-~~~~~~~~~f~~l~~~s 380 (412)
.+++... .+.|. +..+|+++|+++.++++........ +.+.......++.....
T Consensus 329 ~~p~~~~~al~~~---~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 384 (413)
T PRK15403 329 IFPTLFRFTLFSN---NLPKGTVSASLNMVILMVMAVSVEIGRWLWFNGGRLPFHLLAV 384 (413)
T ss_pred HhHHHHHHHhccC---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 3333333 33444 3347999999999998854444444 33334444444444443
No 12
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.76 E-value=1.3e-15 Score=154.34 Aligned_cols=300 Identities=13% Similarity=0.031 Sum_probs=177.8
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.++..++++..|.+.||++||+++..+++........ .....+ . +.+++..++.|..+..+..+.+.
T Consensus 56 ~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~------~~~~~~------~-~~l~~~~~l~g~~~~~~~~~~~~ 122 (400)
T PRK11646 56 QFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT------MAIAHE------P-WLLWLSCILSGLGGTLFDPPRTA 122 (400)
T ss_pred HHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH------HHHhcc------H-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677788999999999999999999998766443221 111111 1 23444445566666555554443
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
.+ .| .++++ +..++++..+..+.++..+||.++|.+. ..+|+..+++.+...++.... .. ...||
T Consensus 123 ~~-~~----~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~----~~--~~~~~ 187 (400)
T PRK11646 123 LV-IK----LIRPH---QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF----NA--WLLPA 187 (400)
T ss_pred HH-HH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH----HH--HhCCc
Confidence 33 23 45543 7899999999999999999999999999 579998887655444333211 11 12232
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP 245 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~ 245 (412)
+ ++++ + .++..++++.+++||.++........+...........+.|.++.+.++
T Consensus 188 ~---~~~~--------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 242 (400)
T PRK11646 188 Y---KLST--------------V--------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSP 242 (400)
T ss_pred c---cccc--------------c--------chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCc
Confidence 1 0000 0 0123457888899998775333222221101112223566777766688
Q ss_pred chhHHHhhHHHHHHHHHHHHHH-HHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015174 246 SIIGGFSGLCASMGVAATFLSA-YLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324 (412)
Q Consensus 246 ~~~G~~~~~~avggllGt~l~~-~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~ 324 (412)
..+|.+.+..+++++.+..... +..||.+..+....+......... ...... . ...... ..++...|...
T Consensus 243 ~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~--~l~~~~-~----~~~~~~--~~~l~~~g~~~ 313 (400)
T PRK11646 243 SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMF--PIGMVS-N----LQQLFT--LICLFYIGSII 313 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH--HHHHhh-h----HHHHHH--HHHHHHHHHHH
Confidence 9999999888887775554444 455677766655544332211111 111111 1 111111 11112223334
Q ss_pred hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.+.....+.++.+|++++|++.|..+...+....+.+.+....
T Consensus 314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence 5566778899999999999999999998887655555554433
No 13
>PRK03545 putative arabinose transporter; Provisional
Probab=99.76 E-value=5.4e-15 Score=148.83 Aligned_cols=298 Identities=11% Similarity=-0.007 Sum_probs=169.2
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...++.++.|.+.||++|||++..+.+.-.+ ++. ...+.. ..+.+++.-++.|............
T Consensus 54 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~----~~~--~~~~~~-------~~~~l~~~r~~~G~~~~~~~~~~~~ 120 (390)
T PRK03545 54 AWVVALMSLPLMLLTSNVERRKLLIGLFVLFIA----SHV--LSALAW-------NFTVLLISRIGIAFAHAIFWSITAS 120 (390)
T ss_pred HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH----HHH--HHHHhc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999999998888653322 221 111111 1123444444555554444333332
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
.+. | .++++ +..++++........+..+||.+++.+.+..||+..+++.+...++... .....+||
T Consensus 121 ~i~-~----~~~~~---~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~------~~~~~~~~ 186 (390)
T PRK03545 121 LAI-R----VAPAG---KKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLL------LLIKLLPL 186 (390)
T ss_pred HHH-H----hCChh---hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHH------HHHHhCCC
Confidence 222 3 45543 6889999999999999999999999999999999988765544433321 11112232
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN 244 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls 244 (412)
+ ++++ + .. .+.++..+|+|.++.......++........+..+.|+. +.|+|
T Consensus 187 ~----~~~~-------------~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s 239 (390)
T PRK03545 187 L----PSEH-------------S------GS----LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLS 239 (390)
T ss_pred C----CCCC-------------c------ch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1 0100 0 00 123556788888766443333221101111222344555 47999
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~ 324 (412)
+...|.+....+++++.|+++.+++.+|.|+++ ..++....... ........++ ..... ...++.+++...
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~~~~--~~~l~~~~~~----~~~~~--~~~~l~g~~~~~ 310 (390)
T PRK03545 240 ENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-LLIAIALLLVC--LLLLLPAANS----EWHLS--VLSIFWGIAIMC 310 (390)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHHH--HHHHHHHhch----HHHHH--HHHHHHHHHHhc
Confidence 999999999999999999999999999998754 33333221111 1111111111 11111 111111223322
Q ss_pred hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.........|+..| +++|++.|..+++.+....+...+....
T Consensus 311 ~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~ 352 (390)
T PRK03545 311 IGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQV 352 (390)
T ss_pred chHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555666545 6889999999988776333334443333
No 14
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.76 E-value=7e-15 Score=146.33 Aligned_cols=319 Identities=13% Similarity=0.026 Sum_probs=183.7
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++|||++..+.+...+. .. ...+... . +.+++..++.|........+...
T Consensus 50 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~~ 116 (385)
T TIGR00710 50 LLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALS----SL--GLALSNN------I-ETLLVLRFVQAFGASAGSVISQA 116 (385)
T ss_pred HHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHcchhHHHHHHHH
Confidence 4566788999999999999999988776533222 21 1111111 1 23344444555555444444433
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
+..| .++++ +..+.++.......++..+||.++|.+.+..+|+..+++.....++.... .....||
T Consensus 117 -~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 182 (385)
T TIGR00710 117 -LVRD----IYPGE---ELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSAL------IFFILPE 182 (385)
T ss_pred -HHHH----hcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH------HHHhCCC
Confidence 3335 45543 78899999999999999999999999999999998876544433332211 1112333
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHH-HHHHHhhhccchHHHHHHH-hcCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFLT-QRGL 243 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a-~l~~t~v~~~~~~~~~y~~-~~gl 243 (412)
+. + ++. + + ..++..+.++..+++|.++...... ..+.. ...+....+.|.+ ++|.
T Consensus 183 ~~-~--~~~----------~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 239 (385)
T TIGR00710 183 TL-P--YEA----------R--I-------QISTYFETFLLLLKSKMFWGYALIYGASFGG-FFAFFSGAPFVYIDIMGV 239 (385)
T ss_pred CC-C--Ccc----------c--C-------CHHHHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHHcChHHHHHHcCC
Confidence 11 0 000 0 0 0112234677778888877633322 22211 1112222344554 6899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|.+.+...++++.|..+.+++.+|+|.++...++.....+.............. ...... .......+|..
T Consensus 240 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~g~~~~ 315 (385)
T TIGR00710 240 SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLG--SWAMII--GPMMFVGIGNS 315 (385)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccc--hHHHHH--HHHHHHHHHHH
Confidence 99999999999999999999999999999999888776654433322222111111110 111111 11111122221
Q ss_pred -hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015174 324 -SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS 380 (412)
Q Consensus 324 -~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s 380 (412)
.+.....+..++ .|+++|++++..++.++..+.+.........+....+......
T Consensus 316 ~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 316 MISSIAMAYALED--FPHVAGTASALFGTLRLVLGAIVGYLVSLIHGNTAWPMSLSCL 371 (385)
T ss_pred HHHHHHHHHHhcc--CcccchHHHHHHHHHHHHHHHHHHHHHHhccccChHHHHHHHH
Confidence 233444444443 4578999999999999876555555554455544444444443
No 15
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.75 E-value=8.9e-15 Score=147.24 Aligned_cols=320 Identities=13% Similarity=0.069 Sum_probs=183.1
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++..+..++.|.+.||++|||++..+.+...+. .. ....... . +.+++..++.|......... .
T Consensus 52 ~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~g~~~~~~~~~-~ 117 (394)
T PRK11652 52 YLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILG----TL--VALFAHS------L-TVLIAASAIQGLGTGVGGVM-A 117 (394)
T ss_pred HHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHH----HH--HHHHHcc------H-HHHHHHHHHHHhhhhHHHHH-H
Confidence 45788899999999999999999988775533222 11 1111111 1 22333334444433332222 2
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.++.+| .++++ +..++|+.......++.++||.++|.+.+..+|+..+++.....++... ......|
T Consensus 118 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~------~~~~~~~ 184 (394)
T PRK11652 118 RTLPRD----LYEGT---QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF------SMARWMP 184 (394)
T ss_pred HHHHHH----hcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH------HHHHhCC
Confidence 233445 44432 7889999999999999999999999999988999887764433332221 1112233
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gl 243 (412)
|+ ++ ++. + .++..++++..++||.++..+......+.....+......|.++ +|.
T Consensus 185 ~~-~~--~~~-------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 240 (394)
T PRK11652 185 ET-RP--ADA-------------R--------RTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGL 240 (394)
T ss_pred cc-Cc--ccc-------------c--------hhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCC
Confidence 31 10 000 0 01245678888999987763333222211012222233446655 899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|++.....++.++|+.+.+++.+|.+ +....+..................... .........+.....|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~- 315 (394)
T PRK11652 241 SSMTVSILFILPIPAAFFGAWFAGRPNKRFS--TLMWQSVICCLLAGLLMWIPGWFGVMN--VWTLLVPAALFFFGAGM- 315 (394)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcccc--HHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999998 233333222111111111111111101 11111111222223333
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHH
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLL 382 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~ 382 (412)
.........++..| +++|+++++.++.++....+...+.....+...++....+..+
T Consensus 316 -~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (394)
T PRK11652 316 -LFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTGQFSLGLLMTLM 372 (394)
T ss_pred -HHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHH
Confidence 33444445555555 6889999999999887666666666666655556655544433
No 16
>PRK11043 putative transporter; Provisional
Probab=99.75 E-value=1.2e-14 Score=146.74 Aligned_cols=313 Identities=12% Similarity=-0.009 Sum_probs=181.6
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++..+.+++.|.+.||++||+++..+.+.-.+. +. ...+... . +.+++.-++.|......... .
T Consensus 50 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~-~ 115 (401)
T PRK11043 50 FLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG----SL--GMLWVES------A-AQLLVLRFVQAVGVCSAAVI-W 115 (401)
T ss_pred HHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH----HH--HHHHhcC------H-HHHHHHHHHHHhhhHHHHHH-H
Confidence 35567788999999999999999988776533221 11 1112111 1 22333333333332222222 2
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.++..| .++++ +..+.++.......++..++|.++|.+....+|+..++.......+... .. ...+
T Consensus 116 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~-----~~--~~~~ 181 (401)
T PRK11043 116 QALVID----RYPAQ---KANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLIL-----PT--LRLK 181 (401)
T ss_pred HHHHHH----hcCcH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHH-----HH--HHcC
Confidence 233445 45443 6778888888888899999999999999999999887654443333321 11 1222
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHHhcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~~~gl 243 (412)
|+.. +++. + +..++++..+++|.++.... ....... ...+....+.|.++.|+
T Consensus 182 ~~~~--~~~~-------------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g~ 235 (401)
T PRK11043 182 PSKK--ARKQ-------------S----------QDALTFKQLLKSKTYLGNVLIFAACSAA-FFAWLTGSPFILEQMGY 235 (401)
T ss_pred CCCC--cccc-------------c----------hHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHHHHhHHHHHHcCC
Confidence 2110 0000 0 01246777788887765222 1111111 11222334567777899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|+.....+++.+.|+++.+++.+|+|.+|...+......++.............+ ..... ....+.....|.
T Consensus 236 s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~- 312 (401)
T PRK11043 236 SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPS-LVPLL-IPFCVMAAANGA- 312 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCc-HHHHH-HHHHHHHHHHHH-
Confidence 999999999999999999999999999999998876555443333322222111111111 11111 111122223344
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL 376 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l 376 (412)
.++.......|+ .|+++|++.|++++++++...+....+..+.+...+...
T Consensus 313 ~~~~~~~~~~~~--~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 363 (401)
T PRK11043 313 IYPIVVAQALRP--FPQATGKAAALQNTLQLGLCFLASLLVSALISTPLLTTG 363 (401)
T ss_pred HHHHHHHHHhhh--CcccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHHH
Confidence 455555555555 457899999999999998777777776666665445443
No 17
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.75 E-value=1.8e-15 Score=172.03 Aligned_cols=314 Identities=15% Similarity=0.072 Sum_probs=191.1
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..+|.+++++++|.+.||++||+++..+.+++.+..++... .. ... ..+.+++..++.|....+...+.
T Consensus 55 ~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~--~~-~~~-------~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 55 LFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVL--AY-YLG-------WFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHH--HH-HHc-------cHHHHHHHHHHHHHHHHhhchHH
Confidence 457889999999999999999999999988766554332211 11 111 11345555566777776666554
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------cC-hhHHHHHHHHHHHHHHHHHH
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK--------YE-PVTCLKFAAGLIMWSLPVMI 154 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~--------~~-~~~~~~~~~~~~~~s~~~~~ 154 (412)
. ++..| +++++ +..++|+.......++.++||.++|.+... .+ |...+.+. .+....+.+
T Consensus 125 ~-~~i~~----~~~~~---~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 193 (1146)
T PRK08633 125 Y-GIIPE----LVGKE---NLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV---LLAVAVLGL 193 (1146)
T ss_pred H-hhhHH----hcCcc---cchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH---HHHHHHHHH
Confidence 3 33334 66654 789999999999999999999999999886 22 22222111 111111111
Q ss_pred HHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHH
Q 015174 155 ILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLM 234 (412)
Q Consensus 155 ~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~ 234 (412)
....++++. ++.++.. . ++ .+ ....++..++++..+++|.++..+....++......+....
T Consensus 194 ---~~~~~~~~~-~~~~~~~--~-~~------~~-----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (1146)
T PRK08633 194 ---IFAYRLPKV-PAAAPEV--F-DK------KK-----YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANF 255 (1146)
T ss_pred ---HHHhcCcCC-CCCCccc--c-cc------cc-----cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111233331 1110000 0 00 00 11234566789999999987764443333311112233345
Q ss_pred HHHHH-hcCCCCc-hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 235 TAFLT-QRGLNPS-IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 235 ~~y~~-~~gls~~-~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
+.|.. .+|+++. ..|++.+..+++.++|+++.+++.+|++..+...++.....++... ..+.++ . ..+.
T Consensus 256 ~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~----~--~~~~ 326 (1146)
T PRK08633 256 PAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFL---LPTAPS----L--ASVL 326 (1146)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHH---HHHhhh----H--HHHH
Confidence 56665 5899999 9999999999999999999999999999877766554432222111 111111 1 1111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
.+.++.+++..++......+.|+.+|++.||++.|+.++++++...+...++.
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~ 379 (1146)
T PRK08633 327 VLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTT 379 (1146)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 12222233443456677888999999999999999999999875544444443
No 18
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.74 E-value=1.1e-14 Score=147.27 Aligned_cols=293 Identities=15% Similarity=0.042 Sum_probs=170.0
Q ss_pred HHHHHHhhhhhcchhccC-----CcH-HHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015174 6 KLILIVGGPLVGKLMDHS-----PRI-PAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT 79 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~-----~R~-~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~ 79 (412)
.+| .++.+..|.++||+ +|| +.+..+++...++..+ .. +.. +. . ..+.++...++.+......
T Consensus 43 ~~~-~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~-----l~-~~~-~~-~--~~~~l~~~~~~~~~~~~~~ 111 (402)
T PRK11902 43 GQA-YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAA-----MA-FCP-PH-A--ALWPLAGLAVLVAFLSASQ 111 (402)
T ss_pred HHH-HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHH-----HH-hcC-cc-c--hHHHHHHHHHHHHHHHHHH
Confidence 455 47899999999999 454 5788876644333221 11 111 11 1 1123344434455555555
Q ss_pred hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~ 158 (412)
+.+.+.. ++..++++ +..+.|+.......++.++||.+++.+.+. .||+..+++.+....+... .
T Consensus 112 ~~~~~al-----~~~~~~~~---~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l-----~- 177 (402)
T PRK11902 112 DIVFDAY-----STDVLHPE---ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL-----T- 177 (402)
T ss_pred HHHHHHH-----HHHhcChh---hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH-----H-
Confidence 5554433 33355543 689999999988899999999999999985 5999988765544333221 1
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015174 159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL 238 (412)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~ 238 (412)
....+|++. ++++ ++ ...++..++++.++|||.++..+....++......+......|.
T Consensus 178 -~~~~~e~~~--~~~~------------~~------~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l 236 (402)
T PRK11902 178 -TLWAPEPEV--PARP------------PR------SLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFL 236 (402)
T ss_pred -HHhcCCCcc--cccc------------cc------hhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 123343211 1100 00 11223567899999999988866554444210111112222334
Q ss_pred -HhcCCCCchhHHHhhH-HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHHHHHHH-
Q 015174 239 -TQRGLNPSIIGGFSGL-CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLLFFLCL- 314 (412)
Q Consensus 239 -~~~gls~~~~G~~~~~-~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~l~~~g- 314 (412)
+++|+++..+|+..+. +.++++.|+.+.+++.+|+|.+|...++...+......... ...+++ ...+.....
T Consensus 237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~~ 312 (402)
T PRK11902 237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIGI 312 (402)
T ss_pred HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHHH
Confidence 5689999999999866 45678999999999999999988876665543332222111 121111 111111110
Q ss_pred -HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH
Q 015174 315 -IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT 348 (412)
Q Consensus 315 -~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~ 348 (412)
-+....+..........+.|+..|.++++..+++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (402)
T PRK11902 313 ENLCGGMGTAAFVALLMALCNRSFSATQYALLSAL 347 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Confidence 1233344445667777888888887776654444
No 19
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.74 E-value=4.2e-16 Score=152.66 Aligned_cols=308 Identities=16% Similarity=0.096 Sum_probs=191.0
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..++..+++++.|.+.||++|||++..+.+...+. . .. .. +. . + . +.+++..++.|..+.....+.
T Consensus 40 ~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~-~--~~-~~--~~-~---~--~-~~~~~~~~l~g~~~~~~~~~~ 106 (352)
T PF07690_consen 40 AFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALG-S--LL-LA--FA-S---N--F-WLLLIARFLLGIGSGFFSPAS 106 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHH-H--HH-HH--HH-C---C--H-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhH-H--HH-hh--hh-h---h--H-HHHhhhccccccccccccccc
Confidence 356788899999999999999999999998766554 1 11 11 21 1 1 2 244555556777666666555
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
...+. | .++++ +..+.|+.......++.++||.++|.+.+..+|+..+++.+....++.. +.. ...
T Consensus 107 ~~~i~-~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i-----l~~-~~~ 172 (352)
T PF07690_consen 107 NALIA-D----WFPPE---ERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI-----LFI-LFL 172 (352)
T ss_dssp HHHHH-H----CCCTC---CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH-----HHH-CCC
T ss_pred ccccc-c----cchhh---hhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh-----hHh-hhh
Confidence 44333 4 56653 7899999999999999999999999999889999988765555554432 111 111
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHH-Hhc
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFL-TQR 241 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~-~~~ 241 (412)
++++. +++.+ +.++ + + +...++..++++..+++|.++..+....++ +. ...+....+.|+ +.+
T Consensus 173 ~~~~~--~~~~~-~~~~-------~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~ 237 (352)
T PF07690_consen 173 PEPPP--PRERE-SPKE-------S-E---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFV-FSGFSFFLPLYLQEVL 237 (352)
T ss_dssp ---ST--TTT---SSTT-------T-T-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHH-HHHHHHHHHHHCCHHH
T ss_pred hhccc--ccccc-cccc-------c-c---cccccccccccccccccchhhhhhhhhhHHHHH-HHHhhcccchhhhhcc
Confidence 22111 11100 0000 0 0 011223334788888998776322222222 12 133444566674 468
Q ss_pred CCC-CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 242 GLN-PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 242 gls-~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
|.+ +...|.+.+...+.++.+..+.+++.+|+|.++...+........... ....... ....... ...++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~-~~~~~~g~ 311 (352)
T PF07690_consen 238 GFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALG---LLLLPFS--SSPVWLI-IALFLIGF 311 (352)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HCCSHHH--CHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH---HHHHHHh--hhHHHHH-HHHHHHHH
Confidence 999 799999999999999999999999999999877766554432221111 1111100 0011111 12222233
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll 359 (412)
+....+.....+.|+.+|++++|++.|+.++.++....+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~i 350 (352)
T PF07690_consen 312 GFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGII 350 (352)
T ss_dssp HHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 444467889999999999999999999999999876554
No 20
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.74 E-value=1.4e-14 Score=145.80 Aligned_cols=332 Identities=14% Similarity=0.053 Sum_probs=180.8
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||++||+++..+.+...+. +. +..... ..+.+++..++.|.........
T Consensus 63 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~-- 127 (408)
T PRK09874 63 TFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV----MV--LMGLAQ-------NIWQFLILRALLGLLGGFVPNA-- 127 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH----HH--HHHHHh-------hHHHHHHHHHHHHHhhhhHHhH--
Confidence 34566788999999999999999988776543322 21 111111 1123333334444433332222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.+...| .++++ +..++|+.......++.+++|.++|.+.+..+|+.++++......+.... .....+
T Consensus 128 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 194 (408)
T PRK09874 128 NALIAT----QVPRN---KSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLV------TLFCIR 194 (408)
T ss_pred HHHHHH----hcCHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------HHHHhc
Confidence 222223 44432 67889999999999999999999999999899998876644433333211 111223
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHH-HHhhhccchHHHHHHHhcC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLC-LNVVLTPGSLMTAFLTQRG 242 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~-~t~v~~~~~~~~~y~~~~g 242 (412)
|+.. ++++ + + ..+..+.++ .+++|.+.. .+.....+ .. ...+......|.++.+
T Consensus 195 ~~~~-~~~~-----------~--~--------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 250 (408)
T PRK09874 195 ENFQ-PVSK-----------K--E--------MLHMREVVT-SLKNPKLVLSLFVTTLIIQVA-TGSIAPILTLYVRELA 250 (408)
T ss_pred cCcc-cccc-----------h--h--------hhHHHHHHH-hCcCCchHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 2110 0000 0 0 001122333 345655433 33322332 21 1233445666776643
Q ss_pred CCCc----hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015174 243 LNPS----IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 318 (412)
Q Consensus 243 ls~~----~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s 318 (412)
.+.. ..|.+.+..+++++++....+++.+|+|+++....+.......... ...... .....+ ..++.
T Consensus 251 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~---~~~~~ 321 (408)
T PRK09874 251 GNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIP---MSFVQT---PLQLGI---LRFLL 321 (408)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH---HHHhcc---HHHHHH---HHHHH
Confidence 3333 2466667778888899999999999999998887665432222111 111111 111111 11111
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~ 397 (412)
+++...+........|+..|++++|++.+.+++.++....+...++....+.........+..+..+.+.+....+.+|
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222224455666778888999999999999999988666666665555443333333333333333333333333344
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.73 E-value=2.2e-14 Score=145.24 Aligned_cols=300 Identities=11% Similarity=0.062 Sum_probs=178.0
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||.+|||++..+++...+. .. ...+.. ..+.+++.-++.|...........
T Consensus 64 ~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~ 130 (394)
T PRK10213 64 TAFVAMFASLFITQTIQATDRRYVVILFAVLLTLS----CL--LVSFAN-------SFSLLLIGRACLGLALGGFWAMSA 130 (394)
T ss_pred HHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHH----HH--HHHHHC-------hHHHHHHHHHHHHHhhHHHHHHHH
Confidence 35566788999999999999999999998866443 21 111211 113445554566666555444333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
. +..| .++++ +..++|+.......++.++||.+++.+....||+..+++.+...++.. +....+.|
T Consensus 131 ~-~i~~----~~~~~---~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~------l~~~~~~p 196 (394)
T PRK10213 131 S-LTMR----LVPPR---TVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI------FWIIKSLP 196 (394)
T ss_pred H-HHHH----HcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH------HHHHHHCC
Confidence 3 3335 45543 789999999999999999999999999999999998876543332211 11222344
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHhcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~~gl 243 (412)
|+ +++. + +. .++++..+|||.++.......+.+.....+ ....+.|.+++|+
T Consensus 197 ~~----~~~~----------~-~~------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~ 249 (394)
T PRK10213 197 SL----PGEP----------S-HQ------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGF 249 (394)
T ss_pred CC----Cccc----------c-cc------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 31 0100 0 00 112345677887776433322221101111 2234667777899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|......+++++.|+++.+++.+|.+ ++...++......+ .+.......+ ..... ...++.++|..
T Consensus 250 s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~--~~~l~~~~~~----~~~~~--~~~~l~G~~~~ 320 (394)
T PRK10213 250 GVDGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVS--ALVLTLWGSD----KIVAT--GVAIIWGLTFA 320 (394)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHH--HHHHHHHhhh----HHHHH--HHHHHHHHHHH
Confidence 9999999999999999999999999999954 34333332221111 1111222211 11111 11222233444
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHH-HHHHHHHHHhcc
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIAN 368 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~-~ll~~~~~~~~~ 368 (412)
..+...+...|+.+| ++++++++.+.+..++. .+...+.+.+..
T Consensus 321 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~ 365 (394)
T PRK10213 321 LVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD 365 (394)
T ss_pred hhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577777878888887 55778888777776653 444444455544
No 22
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.73 E-value=4.1e-15 Score=146.88 Aligned_cols=332 Identities=16% Similarity=0.072 Sum_probs=185.0
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++..+..++.|.+.||++||+++..+.+...+. .. ...+... . +.+++.-++.|........+..
T Consensus 38 ~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~~ 104 (399)
T TIGR00893 38 FSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF----TG--LQAFAGA------Y-VSLYILRVLLGAAEAPFFPGII 104 (399)
T ss_pred HHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH----HH--HHHHHcC------H-HHHHHHHHHHHHHHHhhhhHHH
Confidence 45677888999999999999999988776544322 11 1111111 1 2334444455555544444433
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
. +..| .++++ +..+.++.......++.+++|.++|.+....+|+..+++.+....+.... . ....+
T Consensus 105 ~-~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~ 170 (399)
T TIGR00893 105 L-IVAS----WFPAS---ERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVL----W--LKFIP 170 (399)
T ss_pred H-HHHH----hCCHH---HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH----h--hheec
Confidence 3 2223 55543 78899999999999999999999999999999998876544333332211 1 11122
Q ss_pred ccccccccccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015174 165 SGVLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG 242 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g 242 (412)
| ++++++..+++.++. .+....+.++ +...+...+.++..+++|.++..+....++......+....+.|++ +.|
T Consensus 171 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (399)
T TIGR00893 171 D-PPQKAKWLTEEEKYIVVGGLLAEQQG--KGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERG 247 (399)
T ss_pred C-CCCccccCCHHHHhhcchhhcccccc--ccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 2 111111000000000 0000000000 0000111234566778887766444333331112333444666775 479
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-H-HHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-G-LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~-~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
.++...|...+...++++++..+.+++.+|+|.++.... . ..........+......+..+ .. ............
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~ 324 (399)
T TIGR00893 248 LSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN--IP-YAALALVALGFF 324 (399)
T ss_pred ccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch--hH-HHHHHHHHHHHh
Confidence 999999999999999999999999999999999762111 1 111111111111122221100 11 111111111122
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV 370 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~ 370 (412)
+. ........+.+|.+|+++||++.|+.+..++....+...+.....+.
T Consensus 325 ~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~ 373 (399)
T TIGR00893 325 GL-GAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAAT 373 (399)
T ss_pred ch-hhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccC
Confidence 22 24567778889999999999999999999988776666665555444
No 23
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.73 E-value=7.6e-15 Score=149.00 Aligned_cols=320 Identities=12% Similarity=0.062 Sum_probs=186.3
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++.++.+++.|.+.||++||+++..+.+...+.... ..+... . +.+++.-++.|...........
T Consensus 62 ~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~------~~~~~~------~-~~l~~~r~l~G~g~g~~~~~~~ 128 (426)
T PRK12307 62 AFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGL------SGLASG------V-IMLTLSRFIVGMGMAGEYACAS 128 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH------HHHHhH------H-HHHHHHHHHHHHHHhhHHHHHH
Confidence 45778889999999999999999998887655443221 111111 1 2344444455554443333322
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
..+ .| ..+++ +..++++.......++.+++|.+++.+....+|+..+++.. ...... .....+.|
T Consensus 129 ~~~-~~----~~~~~---~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~----~~~~~~---~~~~~~~p 193 (426)
T PRK12307 129 TYA-VE----SWPKH---LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGL----LPVLLV---IYIRARAP 193 (426)
T ss_pred HHH-HH----hCCHh---HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHH----HHHHHH---HHHHHHCC
Confidence 222 23 44543 67889999999999999999999999998899999876422 111111 11112333
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhh---ccchHHHHHHHhc
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVL---TPGSLMTAFLTQR 241 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~---~~~~~~~~y~~~~ 241 (412)
|+. +.++++ . ++++++ + +..+++..+.++..+++|.++........++.... ......+.|.++.
T Consensus 194 ~~~-~~~~~~--~-~~~~~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (426)
T PRK12307 194 ESK-EWEEAK--L-SGKGKH---S-----QSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE 261 (426)
T ss_pred CCh-HHHHhh--h-hccccc---c-----ccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 321 100110 0 000000 0 01122234567888899887764332222211001 1233456677788
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
|.++...+...+..+++++.|+.+.+++.+|+|+++....+.....+.... ....... . .........++.....|
T Consensus 262 g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~~~~~~~~~~~~~ 337 (426)
T PRK12307 262 GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFP--LFRIPQD-N-YLLLGACLFGLMATNVG 337 (426)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHHHccc-c-HHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999988877665433222111 1111111 0 11111112222111112
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVS 371 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~ 371 (412)
. ........|+.+|++.||++.|...++.+....+.+.+.....+-.
T Consensus 338 ~---~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 338 V---GGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred H---hHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 2 2233456789999999999999999999887766766655554433
No 24
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.71 E-value=2.2e-14 Score=144.53 Aligned_cols=303 Identities=14% Similarity=-0.009 Sum_probs=163.9
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..++..+++++.|.++||++|||++..+++...+.... +. ...+... +.-+..+.+++.-++.|........+.
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~-~~--~~~~~~~--~~~~~~~~l~~~r~l~G~~~~~~~~~~ 133 (399)
T PRK05122 59 LQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL-YL--LAGLLAA--WPVLSLLLLLLGRLLLGIGESLAGTGS 133 (399)
T ss_pred HHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH-HH--Hhhhhhc--cchhHHHHHHHHHHHHHhhHHhhcchH
Confidence 456788899999999999999999999988755443111 11 1111110 000011123444456776666655554
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
...+. | .++++ +..++++........+.++||.++|.+....+|+..+++.....++.+ ...++.
T Consensus 134 ~~~~~-~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~-------~~~~~~ 198 (399)
T PRK05122 134 ILWGI-G----RVGAL---HTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGL-------LLARPR 198 (399)
T ss_pred HHHHH-h----hcChh---hhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHH-------HHHhcC
Confidence 33222 2 45543 678899988888888999999999999999999876554322211111 111122
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl 243 (412)
|++ ++++. + + .+ ..+.++.++++.... ......+ .........|.+++|.
T Consensus 199 ~~~---~~~~~-------------~-~---~~----~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~ 248 (399)
T PRK05122 199 PAV---PPVKG-------------E-R---LP----FRRVLGRVWPYGMGL--ALASIGF----GTIATFITLYYAARGW 248 (399)
T ss_pred CCC---CCCCc-------------c-c---hh----HHHHHHHHHHHHHHH--HHHHHHH----HHHHHHHHHHHHHccc
Confidence 210 00000 0 0 00 112222222221111 0011111 1122234556666776
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
+. .+...+..+++++.|.+..+++.+|+|.+|....+.......... ... ..+ ....+ .+.++.++|.-
T Consensus 249 ~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~--~~~-~~~---~~~~~---~~~~l~G~~~~ 317 (399)
T PRK05122 249 DG--AALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLL--LWL-APS---PWMAL---IGAALTGFGFS 317 (399)
T ss_pred cc--chHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHH-hcc---HHHHH---HHHHHHHHhHH
Confidence 43 466677888889999999999999999988776665432222111 111 111 01111 11122222322
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH-HHHHHHhc
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV-MLGVAIIA 367 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll-~~~~~~~~ 367 (412)
..........++.+|+++||++.|+.++.++....+ ..+.+.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 362 (399)
T PRK05122 318 LVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVA 362 (399)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222344455667789999999999999988875443 33334333
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.71 E-value=4.8e-14 Score=142.25 Aligned_cols=335 Identities=13% Similarity=-0.033 Sum_probs=183.2
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+..++..++.|.+.||++|||++..+.+...+. .. ...+... . +.+++..++.|..........
T Consensus 59 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~l~G~~~~~~~~~~- 124 (406)
T PRK11551 59 GILGLLPGALLGGRLADRIGRKRILIVSVALFGLF----SL--ATAQAWD------F-PSLLVARLLTGVGLGGALPNL- 124 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHH----HH--HHHHhcc------H-HHHHHHHHHHHhhHHHHHHHH-
Confidence 35667788899999999999999988876533221 11 1112211 1 233444445555444433332
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.++..| .++++ +..++++.......++.+++|.+++.+....+|+..+++.....+.... .....+|
T Consensus 125 ~~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~ 191 (406)
T PRK11551 125 IALTSE----AVGPR---LRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVP------LLMRWLP 191 (406)
T ss_pred HHHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHH------HHHHhCC
Confidence 233334 45533 6889999999999999999999999998888999887654332222221 1112234
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc---chHH-HHHHHHHHHhhhccchHHHHHHHh
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV---LPAS-LAYVLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v---~~~~-~~~a~l~~t~v~~~~~~~~~y~~~ 240 (412)
|+. +++++. . + + .+ + +... +..++++. .+.. ..+...+.. ........+.|.++
T Consensus 192 ~~~-~~~~~~--~--~----~-~~-~---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~ 249 (406)
T PRK11551 192 ESR-AFAQAA--G--A----G-KQ-R---APVL-------RALFGEGRATATLLLWISYFFTLIV-LYFLLNWLPSLLVG 249 (406)
T ss_pred CCh-hHHhcc--C--c----c-hh-h---hhhH-------HHHhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence 421 111000 0 0 0 00 0 0001 11111111 1111 111111111 11122235567778
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
+|+++...|...+...++++.|.++.+++.+|+|+++...+.......+... ....+ . .....+. .+...+
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~--~~~~~-~---~~~~~~~---~~~~g~ 320 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAA--LAAAP-S---FAGMLLA---GFAAGL 320 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--HHhcC-c---HHHHHHH---HHHHHH
Confidence 8999999999999999999999999999999999988876543322211111 11111 1 1111111 111121
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh-ccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII-ANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~-~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~ 397 (412)
+.-........+.++.+|+++||++.|..++..+....+...+... .......+....+...+...+..+.....+|
T Consensus 321 ~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (406)
T PRK11551 321 FVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVSR 398 (406)
T ss_pred HHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2212334455678899999999999999999999866666555444 4444445444444444444444444433343
No 26
>PRK12382 putative transporter; Provisional
Probab=99.71 E-value=2.3e-14 Score=144.12 Aligned_cols=305 Identities=13% Similarity=-0.016 Sum_probs=164.7
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..++..++.++.|.++||++|||++..+.+...++... .. ........... ..+.+++.-++.|........+.
T Consensus 59 ~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~-~~--~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~ 133 (392)
T PRK12382 59 IQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLA-YL--LAAILPVSAPF--KFALLVVGRLILGFGESQLLTGA 133 (392)
T ss_pred HHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHH-HH--hhhccccchhH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 346778899999999999999999988887644322110 10 10011100000 11223444445665555444433
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
.. ...| .++++ +..++++........+..+||.++|.+....||+..+.+.....+.. ....++.
T Consensus 134 ~~-~~~~----~~~~~---~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~-------~~~~~~~ 198 (392)
T PRK12382 134 LT-WGLG----LVGPK---HSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLA-------WAFNGTV 198 (392)
T ss_pred HH-HHHh----hCCcc---ccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHH-------HHHHHhc
Confidence 22 2223 45543 68889999988888999999999999999899986543322111111 1111222
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl 243 (412)
||++ ++++ .++ + .++.++..++.. +. .+.....+. ........|.++.|.
T Consensus 199 ~~~~---~~~~----------~~~-------~----~~~~~~~~~~~~-~~-~~l~~~~~~----~~~~~~~~~~~~~~~ 248 (392)
T PRK12382 199 RKVP---AHAG----------ERP-------S----LWSVVGLIWKPG-LG-LALQGVGFA----VIGTFVSLYFASKGW 248 (392)
T ss_pred cCCC---CCcc----------cCc-------h----HHHHHHHHHHhH-HH-HHHHHHHHh----HHHHHHHHHHHhcCC
Confidence 3210 0000 000 0 112233333321 11 111111111 111224456777777
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++ .+......+++.+.+....+++.+|+|.+|....+.....+.... ... .++ ..... .+.++..++.-
T Consensus 249 ~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~--~~~-~~~----~~~~~--~~~~l~g~~~~ 317 (392)
T PRK12382 249 AM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLL--LWL-APT----AWVAL--AGAALTGAGCS 317 (392)
T ss_pred ch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHH--HHH-ccc----HHHHH--HHHHHHHHHHH
Confidence 65 455667778888999999999999999998887766543332221 111 111 11111 11112222221
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
..........++..|+++||+++|+.++..+....+...+.....+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 363 (392)
T PRK12382 318 LIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLAT 363 (392)
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223455566777899999999999999988765555555444433
No 27
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.70 E-value=7.7e-14 Score=140.32 Aligned_cols=229 Identities=15% Similarity=0.083 Sum_probs=136.3
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.++.++..++.|.+.||++|||++..+.+.-.+ ++. ......+ . +.+++.-++.|.......... .
T Consensus 48 ~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i----~~~--~~~~~~~------~-~~~~~~~~l~g~~~~~~~~~~-~ 113 (392)
T PRK10473 48 LAGMAAAMLFAGKIADRSGRKPVAIPGAALFII----ASL--LCSLAET------S-SLFLAGRFLQGIGAGCCYVVA-F 113 (392)
T ss_pred HHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHH----HHH--HHHHhCc------H-HHHHHHHHHHHhhhhHHHHHH-H
Confidence 456677889999999999999998776543222 121 1111111 1 123333344454444333322 2
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
++.+| .++++ +..+.++.......++.+++|.+++.+.+..+|+..+++.+....+.... ....++|
T Consensus 114 ~~i~~----~~~~~---~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~------~~~~~~~ 180 (392)
T PRK10473 114 AILRD----TLDDR---RRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLL------SLFILKE 180 (392)
T ss_pred HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHH------HHHHcCC
Confidence 23334 45543 78899999999999999999999999988889998876654433333211 1122333
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH-HhcCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL-TQRGLN 244 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~-~~~gls 244 (412)
+.. + +++ + + . . ..+..+..++||.++.......+.......+....+.|. +++|++
T Consensus 181 ~~~-~-~~~----------~--~-~----~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 237 (392)
T PRK10473 181 TRP-A-RAP----------A--A-S----S----KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFS 237 (392)
T ss_pred CCC-c-ccC----------C--c-c----c----hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCC
Confidence 111 0 000 0 0 0 0 012233456777665533322222110111222223344 468999
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
+..+|.+....+++++++.++.+++.+|+|.++...++..
T Consensus 238 ~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 238 RGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 9999999999999999999999999999999888776654
No 28
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.68 E-value=6.6e-14 Score=140.74 Aligned_cols=293 Identities=13% Similarity=0.062 Sum_probs=167.1
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHH-HHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAY-ICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~-~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
..++..+.++..|.++||.+|++.. +...+ ...+ ..+....... ..+.+++...+.+........+.
T Consensus 48 ~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~---~~~~---~~~~~~~~~~------~~~~l~i~~~l~g~~~~~~~~~~ 115 (382)
T PRK11128 48 GLVARFLGSLLIAPRVKDPSQLIPALRLLAL---LTLL---FAVAFWFGAH------SFWLLFVAIGLFNLFFSPLVPLT 115 (382)
T ss_pred HHHHHHhhhHHHHHHHhhhcchHHHHHHHHH---HHHH---HHHHHHHhcc------cHHHHHHHHHHHHHHHcccccHH
Confidence 3567788899999999999985321 11111 1111 1111111111 11333443344454443333333
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
. ++..|| .+ +..+.+++.+....++..+||.++|.+.+..||+..+++.+....+.. +.. ...
T Consensus 116 ~-a~~~~~-----~~----~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~------~~~-~~~ 178 (382)
T PRK11128 116 D-ALANTW-----QK----QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASML------LGQ-LLR 178 (382)
T ss_pred H-HHHHHH-----Hh----hccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH------HHH-Hcc
Confidence 2 233354 11 355677778888889999999999999999999988765443222111 111 122
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gl 243 (412)
||+.+ ++++ + ++ . ++..++++..+|||.++..+....++......+.+..+.|+++.|.
T Consensus 179 ~~~~~-~~~~------~---~~--~---------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~ 237 (382)
T PRK11128 179 PTIMP-QGES------R---QQ--E---------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGY 237 (382)
T ss_pred CCCCC-cccc------c---cc--c---------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCC
Confidence 33111 0000 0 00 0 0112467889999988875444333311112344556778888999
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++..+|.+.+.+.++.+.+.+..+++.+|+|.++....+.....+.... ... .+. ... +....++.+++.-
T Consensus 238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~--~~~-~~~----~~~--~~~~~~l~g~~~~ 308 (382)
T PRK11128 238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGL--MGS-TTA----LPW--LIVIQILHCGTFT 308 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH--HHh-hhh----HHH--HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999877665432222111 111 111 111 1112222233332
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 357 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ 357 (412)
.+......+.|+. +++++|++.+..+++++..+
T Consensus 309 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g 341 (382)
T PRK11128 309 VCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGS 341 (382)
T ss_pred HHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHH
Confidence 3556667777775 67777999998887766543
No 29
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.68 E-value=1.6e-13 Score=138.03 Aligned_cols=328 Identities=12% Similarity=0.052 Sum_probs=178.9
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+..++..++.|.+.||++|||++..+.+...+... ...+... . +.+++.-++.|...........
T Consensus 47 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~------l~~~~~~------~-~~l~~~r~l~G~~~~~~~~~~~ 113 (382)
T PRK10091 47 YALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA------MFTLSSS------Y-LMLAIGRLVSGFPHGAFFGVGA 113 (382)
T ss_pred HHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH------HHHHhCc------H-HHHHHHHHHHHhhhHHHHHHHH
Confidence 3567788899999999999999998888765433221 1112211 1 3344444455554443333332
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
. +..| .++++ +..+.++.......++..+||.++|.+.+..+|+.++++......+... ...+++|
T Consensus 114 ~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~------~~~~~lp 179 (382)
T PRK10091 114 I-VLSK----IIKPG---KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLA------SIYFWVP 179 (382)
T ss_pred H-HHHH----hCChH---HhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHH------HHHHhCC
Confidence 2 2334 45543 5778899888888999999999999999989999988765443333221 1122344
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccchHHHHHHH-hcC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFLT-QRG 242 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~~~~~y~~-~~g 242 (412)
|. + ++. + .+ .++.++ ..|+|..+..+....+ +.. ...+.+....|.+ ..|
T Consensus 180 ~~---~-~~~----------~-~~-----------~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g 231 (382)
T PRK10091 180 DI---R-DEA----------K-GG-----------LREQFH-FLRSPAPWLIFAATMFGNAG-VFAWFSYIKPYMMFISG 231 (382)
T ss_pred CC---C-ccc----------c-cC-----------HHHHHH-HhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 41 1 110 0 00 012233 2345544432222111 111 1111122234554 589
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH 322 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL 322 (412)
.++...|++....++++++|.++.+++.+|+|.++...++.....+..... ...... ....+. ...+...|.
T Consensus 232 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~--~~~~~~----~~~~~~--~~~~~~~g~ 303 (382)
T PRK10091 232 FSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLML--FFFGGM----KTASLI--FAFICCAGL 303 (382)
T ss_pred CCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHH--HHHHhh----HHHHHH--HHHHHHHHH
Confidence 999999999999999999999999999999999888776655433222111 111111 111111 111122233
Q ss_pred hhhh-hhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 323 MSYD-IVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 323 w~~d-l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~ 397 (412)
.... .......|+..|++++|+.++ ++..+. ..+.....+.+......+......+......+......+.++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 304 FALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred HhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 2222 223345666667777877654 333344 333344444445434445555555544444444444455444
No 30
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.67 E-value=4.2e-13 Score=135.92 Aligned_cols=324 Identities=9% Similarity=0.022 Sum_probs=174.6
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...++.++.|.+.||++|||++..+.+...+...+ .. ...... . ..+.++..-++.|..........+
T Consensus 57 ~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~----~~-~~~~~~--~--~~~~l~~~~~i~G~g~~~~~~~~~ 127 (402)
T TIGR00897 57 YGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAA----FI-VFGLGH--A--NYPLILLFYGIRGLGYPLFAYSFL 127 (402)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH----HH-HHhccC--c--cHHHHHHHHHHHHcchHHHHhHHH
Confidence 35677889999999999999999998887654332111 01 111110 0 112233333333333222222222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
. ...| .++++ +..++|+.......++. +.||.++|.+....||+..++........... ....+ .
T Consensus 128 ~-~~~~----~~~~~---~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~--~ 193 (402)
T TIGR00897 128 V-WVVY----NTKQD---NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGV----IALFS--N 193 (402)
T ss_pred H-HHHH----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH----HHHhc--c
Confidence 2 1222 44433 78999999999988886 68999999999888866554432221111111 01111 1
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcC
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRG 242 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~g 242 (412)
++ .+ ++++. + + + ...++..++++..+++|.++......... .. ...+....+.|.+++|
T Consensus 194 ~~-~~-~~~~~-----~-------~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g 253 (402)
T TIGR00897 194 KD-IF-TPQHM-----Q-------T-R----EKFSELGKAATILFTNPNVLLGGMVRIINTIG-LFGFAVFLPMFVAELG 253 (402)
T ss_pred CC-CC-Ccccc-----c-------C-C----cchhhHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcC
Confidence 11 00 00000 0 0 0 01233456788899999887644322222 11 1223334567888899
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHHHHHhcCC-CcCcchH--HHHHHHHHHh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-GLIFQASLLAMAVAVYWSGS-LSQQNPL--LFFLCLIVLS 318 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~~~~~~~~l~~~v~~~~~g~-~~~~~~~--~l~~~g~~~s 318 (412)
+++...+...+...++++.|+...+++.+|+|+++...+ +.....++.. +. ...+.. ....... ..+..|+
T Consensus 254 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~-~l-~~~~~~~~~~~~~~~~~~~~~G~--- 328 (402)
T TIGR00897 254 FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTL-AL-YYIPQHFGHSFAVALIIAIALGI--- 328 (402)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHH-HH-HHHHHccCCcHHHHHHHHHHHHH---
Confidence 999999999999999999999999999999998776532 2221111111 11 111100 0001111 1112222
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH-HhccCCCchhHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA-IIANDVSHFGFLATLS 380 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~-~~~~~~~~f~~l~~~s 380 (412)
+.... .......++ ++|++||++.|+.++..+....+.+.+. .+....+.....++.+
T Consensus 329 --~~~~~-~~~~~~~~~-~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a 387 (402)
T TIGR00897 329 --FLAGY-VPLAAVFPT-LAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFA 387 (402)
T ss_pred --HHHHH-HHHHHHHHh-hCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 22111 223445555 4567899999999999887665555544 3433333333333333
No 31
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.66 E-value=5.9e-14 Score=140.31 Aligned_cols=326 Identities=11% Similarity=0.067 Sum_probs=172.2
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||++||+++..+.+...+. +. ...+... . +.++..-++.|...........
T Consensus 56 ~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~G~~~~~~~~~~~ 122 (405)
T TIGR00891 56 ALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG----TL--ACGFAPG------Y-ITMFIARLVIGIGMGGEYGSSA 122 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH----HH--HHHHhcc------H-HHHHHHHHHHHhhhhhhhHHHH
Confidence 45677889999999999999999988876543222 21 1111111 1 2344445555655544443332
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTWFTNK 162 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~~~~~ 162 (412)
. ...| .++++ +..++++.......++.+++|.+++.+....+ |+..+.+.+...+.. .....+
T Consensus 123 ~-~i~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~-------~~~~~~ 187 (405)
T TIGR00891 123 A-YVIE----SWPKH---LRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFA-------LWLRKN 187 (405)
T ss_pred H-HHHH----hCChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH-------HHHHHh
Confidence 2 2234 44443 78899999999999999999999999998776 888765422111111 111234
Q ss_pred ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcC-C-cchHHHH-HHHHHHHhhhccchHHHHHHH
Q 015174 163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQ-P-VLPASLA-YVLLCLNVVLTPGSLMTAFLT 239 (412)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-~-v~~~~~~-~a~l~~t~v~~~~~~~~~y~~ 239 (412)
.||++..++++.++...+++..+..+.++..+...++..+..+...++ + .+..... ....++. ........+.|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 266 (405)
T TIGR00891 188 IPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLY-SHPIQDLLPTYLK 266 (405)
T ss_pred CCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHH
Confidence 454221111100000000000000000000000011111111111111 1 0111111 1111111 1223344566775
Q ss_pred -hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH--HHHHHHHH
Q 015174 240 -QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL--LFFLCLIV 316 (412)
Q Consensus 240 -~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~--~l~~~g~~ 316 (412)
++|+++.+.|.+.+...+++++|+++.+++.+|+|+++....+.....+ ........+. + .... ..+..+..
T Consensus 267 ~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~ 341 (405)
T TIGR00891 267 ADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQL---LIIPVFAIGA-N-VAVLGLGLFFQQML 341 (405)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHH---HHHHHHHhCC-c-hHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999998887766543211 1111111111 1 1111 11111111
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
. .+. + .......|+..|+++||++.|+.+++.+....+...+.....+
T Consensus 342 ~--~~~--~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 342 V--QGI--W-GILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred H--ccc--h-hhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 111 2 2334567889999999999999999988866655555444433
No 32
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.66 E-value=2e-13 Score=142.30 Aligned_cols=318 Identities=14% Similarity=0.023 Sum_probs=181.2
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+....+.++.|.+.||++||+++..+.++..+... ...... ..+.+++.-++.|............
T Consensus 51 ~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~------~~~~a~-------~~~~li~~r~l~G~g~~~~~~~~~~ 117 (495)
T PRK14995 51 SLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASL------AAAFSP-------TASWLIATRALLAIGAAMIVPATLA 117 (495)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH------HHHHcC-------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677889999999999999999888765433311 111111 1123343334555555444444333
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
.+.++ ..++ ++..++++.+.....++..+||.++|.+....+|+..|++.....++.... ....+|+
T Consensus 118 ~l~~~----~~~~---~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l------~~~~l~~ 184 (495)
T PRK14995 118 GIRAT----FTEE---KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGL------TARYVPR 184 (495)
T ss_pred HHHHH----cCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHH------HHHhCCC
Confidence 34443 2232 278999999999999999999999999999999999887654444433321 1122343
Q ss_pred cccccccccccccC-------------CCCCCCCCCchhh--hH-----------HhHHHHHHh----HHHHhcCCcchH
Q 015174 166 GVLDRAKCSQSCCR-------------TSNEGPVPDADNI--VD-----------VGIEAIKLG----WKEYMQQPVLPA 215 (412)
Q Consensus 166 ~~l~~~~~~~~~~~-------------~~~~~~~~~~~~~--~~-----------~~~~~~~~g----~~~~~~~~v~~~ 215 (412)
+..+++++.+.... .++ ..+...... .. ....+.+.. -...+|||.+..
T Consensus 185 ~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~ 263 (495)
T PRK14995 185 QAGRRDQPLNLGHALMLIVAILLLVYSAKT-ALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILS 263 (495)
T ss_pred CCCCCCCCCChHhHHHHHHHHHHHHHHHHh-ccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHH
Confidence 11000000000000 000 000000000 00 000010000 013577888877
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 015174 216 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV 294 (412)
Q Consensus 216 ~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v 294 (412)
+............++....+.|++. +|+|+.+.|+.....+++..+++.+.+++.+|+|.++....+.....+....
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~-- 341 (495)
T PRK14995 264 GVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYG-- 341 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHH--
Confidence 6554444422112233345567764 8999999999999999999999999999999999977766555432222111
Q ss_pred HHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015174 295 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356 (412)
Q Consensus 295 ~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~ 356 (412)
........+ ..... ...++.++|.-..........|+.+|++++|+++++.+..++..
T Consensus 342 l~~~~~~~~-~~~~~---~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG 399 (495)
T PRK14995 342 LAMTDFSTQ-QWQAW---GLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELG 399 (495)
T ss_pred HHHhcCCCc-hHHHH---HHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHH
Confidence 111111111 11111 12233344544455667778889999999999999999888764
No 33
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.65 E-value=2.1e-13 Score=134.41 Aligned_cols=307 Identities=11% Similarity=-0.018 Sum_probs=170.5
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++||+++..+.+...+. +. ...+... . +.+++.-.+.|..+........
T Consensus 47 ~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~ 113 (377)
T TIGR00890 47 LLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLG----FT--FYAIADS------L-AALYLTYGLASAGVGIAYGIAL 113 (377)
T ss_pred HHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHH----HH--HHHHHHH------H-HHHHHHHHHHhHHHHHHHHhHH
Confidence 45677889999999999999999988876544332 11 1111111 1 2233333344444333222222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
..++ +| .++ +..++++.......++.+++|.+.+.+.+..+|+..+.+.....++.... ... .++
T Consensus 114 ~~~~-~~----~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~----~~~--~~~ 178 (377)
T TIGR00890 114 NTAV-KW----FPD----KRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVL----GAF--LIG 178 (377)
T ss_pred HHHH-HH----cCc----ccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH----HHH--hee
Confidence 2222 33 232 45678888888888888777777777777789998877644443333221 111 122
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccchHHHHHHHhcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~~~~~y~~~~gl 243 (412)
+++ ++++.+ + + + .+ +....++..+++|.++........ ++. ..........|.+++|.
T Consensus 179 ~~~--~~~~~~-~--~----~-~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (377)
T TIGR00890 179 YPP--GQLIKT-N--I----E-VS----------VKDYTVWEMLRTPQFWVLYLSFFLNAVS-GLLLIGLYKPYGQSLGL 237 (377)
T ss_pred cCc--hhcccc-C--c----c-cc----------hhhhhHHHHHcCccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHcCC
Confidence 211 111000 0 0 0 00 001234556777776653322111 111 11122234456677899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...+.+.+...++++.++.+.+++.+|+|+++...++........... ...+.. . ....+....+.....|.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~-~--~~~~~~~~~~~g~~~g~- 311 (377)
T TIGR00890 238 SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAM--LFIPML-N--DVLFLATVALVFFTWGG- 311 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHH--HHcccc-h--hHHHHHHHHHHHHHhcc-
Confidence 99999999999999999999999999999999888776654332222111 111111 0 11111101111111122
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.......+.+|..|+++||++.|..++.+.....+...+....
T Consensus 312 -~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 354 (377)
T TIGR00890 312 -TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHA 354 (377)
T ss_pred -chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence 1223445678889999999999999999888666666554443
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.64 E-value=8.3e-13 Score=131.08 Aligned_cols=296 Identities=15% Similarity=0.062 Sum_probs=157.8
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYIC-LNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~-~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
+...+.+++.|.+.||++|||.+.. +.+.- ++++. ....... . +.+++..++.+......... ..
T Consensus 44 ~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~----~~~~~--~~~~~~~------~-~~l~~~~~~~g~~~~~~~p~-~~ 109 (375)
T TIGR00899 44 IVGIAVSQLLATRSDYQGDRKGLILFCCLLA----ALACL--LFAWNRN------Y-FLLLVLGVLLSSFASTANPQ-LF 109 (375)
T ss_pred HHHHHHHHHHHHHHhccCCchHHHHHHHHHH----HHHHH--HHHhcch------H-HHHHHHHHHHHhhhhhhHHH-HH
Confidence 4567889999999999998887543 43321 11111 1112111 1 23333333444433333322 23
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
++.+| ..+++ +......|+.++....++..+||.++|.+.+..+|+..+++.+....+... .. ...+||
T Consensus 110 ~~~~~----~~~~~-~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~----~~--~~~~~~ 178 (375)
T TIGR00899 110 ALARE----HADRT-GREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGV----LV--WLFLPS 178 (375)
T ss_pred HHHHH----Hhhhc-chhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHH----HH--HHhCCC
Confidence 33444 33332 112223377888888899999999999999999999988765443333321 11 112343
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHH-HHHHhhhccchHHHHHH-HhcCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVL-LCLNVVLTPGSLMTAFL-TQRGL 243 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~-l~~t~v~~~~~~~~~y~-~~~gl 243 (412)
+ + ++++. + + + + +.++..+++|.++....... .+.. ...+....+.|+ +++|.
T Consensus 179 ~-~-~~~~~-----~----~--~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 232 (375)
T TIGR00899 179 Y-P-RGAPG-----A----L--T-R-----------LEVRGLLASRDTRLLFVACTLMWGC-NILYIINMPLLIIHELGL 232 (375)
T ss_pred c-c-cCccc-----c----c--C-c-----------chhhhhhcCcchHHHHHHHHHHHHH-HHHHHhhhHHHHHHHcCC
Confidence 1 1 11100 0 0 0 0 01222456666655332222 2221 112222345566 46899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--HHHHHHHhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--FLCLIVLSRLG 321 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--~~~g~~~sr~G 321 (412)
++.+.|.+.+.....++.+..+.+++.+|+|.+|...++....... ........+ ...... ++.|. ..|
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~g~---~~g 303 (375)
T TIGR00899 233 PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAF---YTGLAADNS---LWALLMLQLLNAI---FIG 303 (375)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHH---HHHHHHHHH---HHHHHHHHHHHHH---HHH
Confidence 9999999999988888999999999999999988876654422111 111111111 111111 11111 223
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
. .........||..|+ ++|++++..++..+....+...+..
T Consensus 304 ~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g 344 (375)
T TIGR00899 304 I--LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGG 344 (375)
T ss_pred H--HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 223344566776665 5679999999888865555444433
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.64 E-value=5.5e-14 Score=138.66 Aligned_cols=324 Identities=11% Similarity=-0.015 Sum_probs=175.5
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++||+++..+.+...+... ...+... . +.+++..++.|...........
T Consensus 39 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~------~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~ 105 (379)
T TIGR00881 39 FSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNL------FFGFSTS------L-WVMAALWALNGIFQGMGWPPCG 105 (379)
T ss_pred HHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHH------HHHHhhh------H-HHHHHHHHHHHhhccccCCchH
Confidence 4567778899999999999999998888664433211 1111111 1 2333434444544443333332
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGA-SLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP-~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
++..| .++++ +..+.++.......++.+++| .+++.+....+|+..+++.+....+.... .. ...
T Consensus 106 -~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~ 171 (379)
T TIGR00881 106 -RTVTK----WFSRS---ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLI----CF--LLL 171 (379)
T ss_pred -HHHHH----hcCHh---hheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH----Hh--eee
Confidence 23334 45543 678889999999999999999 57777777789998776544333322211 11 112
Q ss_pred ccccccccc-cccc-ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh
Q 015174 164 SSGVLDRAK-CSQS-CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 164 ~~~~l~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~ 240 (412)
+|+...++. +.++ ..+++++.. .+ . ++..+...+.++..+++|.++..... ...+.. ...+....+.|+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 245 (379)
T TIGR00881 172 RDSPQSCGLPPAEEMPNEEPDGDA-EK-K---EEELTKKQIFLQYVLLNKVLWYISLGYVFVYVV-RTGILDWSPLYLTQ 245 (379)
T ss_pred CCCccccccCccccCccccccccc-cc-c---cccccchHHHHHHHHhcchHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 221100000 0000 000000000 00 0 01111223457778888887764332 223322 23344456677764
Q ss_pred -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHHHHHH
Q 015174 241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLCLIVL 317 (412)
Q Consensus 241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~g~~~ 317 (412)
.|+++...|...+...+++++|..+.+++.+|.+.+|...........+ ..+....+..+...... ...+..|.
T Consensus 246 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~-- 322 (379)
T TIGR00881 246 EKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI-IVSLLVYWLNPAANPLMDLICLFALGF-- 322 (379)
T ss_pred HhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH-HHHHHHHhcCcchhHHHHHHHHHHHHH--
Confidence 7999999999999999999999999999999875444322222211111 11111111111010011 11111211
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.............++.+|+++||++.|+.++.++....+...+....
T Consensus 323 ---~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l 369 (379)
T TIGR00881 323 ---LVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYL 369 (379)
T ss_pred ---HHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHH
Confidence 11122233445678889999999999999999988666555544333
No 36
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.63 E-value=1.4e-12 Score=130.47 Aligned_cols=293 Identities=18% Similarity=0.154 Sum_probs=180.6
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~~ 85 (412)
+-+.+.+|+...+.||+||||++......=.++-.+++ +.. .++.+.+. ++.--+...++.++...
T Consensus 59 l~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a------lAp-------~f~~Ll~aR~~~g~a~G~f~~i~~~~ 125 (394)
T COG2814 59 LGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSA------LAP-------SFAVLLLARALAGLAHGVFWSIAAAL 125 (394)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH------Hhc-------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45678899999999999999997776543222211111 111 11111111 11222233444444444
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
+. | +++++ +-.|+.+.+..--.++.++|.++|.++=+.+|||.+|+.++..+.+.+. +....+|+
T Consensus 126 a~--~----lvpp~---~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~------~~~~~lP~ 190 (394)
T COG2814 126 AA--R----LVPPG---KRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALL------LLWKLLPP 190 (394)
T ss_pred HH--H----HcCcc---chhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHH------HHHHhCCC
Confidence 33 3 88865 7899999999999999999999999999999999999887777776663 33344551
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHH----HH-h
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF----LT-Q 240 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y----~~-~ 240 (412)
++.++ +.+. + .+.....+|||..+..+....++++ ..|. .+.| +. .
T Consensus 191 ----~~~~~----------~~~~------~-----~~~~~~~l~~p~v~~~l~~t~l~~~--g~F~--~ftYi~P~L~~v 241 (394)
T COG2814 191 ----SEISG----------SLPG------P-----LRTLLRLLRRPGVLLGLLATFLFMT--GHFA--LYTYIRPFLESV 241 (394)
T ss_pred ----ccCCC----------CCCc------c-----hhHHHHHhcCchHHHHHHHHHHHHc--chhh--hHHhHHHHHHHc
Confidence 11110 0000 0 1123346889988887777777743 1111 2333 33 4
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
.|+|++.+++..-..+++++.|+.+.+|+.+| +.+++.......+...+.. ..+..++ ....+ ..++. .
T Consensus 242 ~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~--l~~~~~~----~~~~~--~~~~~--w 310 (394)
T COG2814 242 AGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLA--LTFTGAS----PALAL--ALLFL--W 310 (394)
T ss_pred cCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHH--HHHhcch----HHHHH--HHHHH--H
Confidence 79999999999999999999999999999999 8888877665543333222 2333322 11111 11111 1
Q ss_pred hhhhhhhhhhHHhhccCC---cccchhHHHHHHHHHHH-HHHHHHHHHHhccC
Q 015174 321 GHMSYDIVGAQILQTGIP---SSKANLIGTTEISVASL-VESVMLGVAIIAND 369 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp---~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~ 369 (412)
|+ . .....|.+|...- ||.++.+++.+.+..|. ..+...+.+....+
T Consensus 311 g~-a-~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~ 361 (394)
T COG2814 311 GF-A-FSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA 361 (394)
T ss_pred HH-H-hhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 1 1233344444443 48999999999888887 55555555555555
No 37
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.63 E-value=8.2e-13 Score=133.53 Aligned_cols=330 Identities=12% Similarity=0.029 Sum_probs=184.8
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++|||++..+...-.+... ...+..+ . +.+++.-++.|.......... .
T Consensus 54 ~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~------~~~~a~~------~-~~ll~~r~l~Gig~~~~~~~~-~ 119 (393)
T PRK09705 54 VVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGAL------MRELYPQ------S-ALLLSSALLGGVGIGIIQAVM-P 119 (393)
T ss_pred HHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHH------HHHHCcc------h-HHHHHHHHHHHhHHHHHhhhh-h
Confidence 456778899999999999999998888664433211 1222221 1 234444455555555544433 3
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
++.+|| +++ +..++|+........+..+||.+++.+.+.. +|+..+.+......+... .+.. ..
T Consensus 120 ~~~~~~----~~~----~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~-----~~~~--~~ 184 (393)
T PRK09705 120 SVIKRR----FQQ----RTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF-----AWWW--QS 184 (393)
T ss_pred HHHHHH----ccc----cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-----HHHH--Hh
Confidence 344553 332 4578888888888888999999999988875 899876543222221111 1111 11
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gl 243 (412)
++++ +++++ ++++ .+..+++|.++. .+.+.+.++. ........+.|+.++|+
T Consensus 185 ~~~~-~~~~~----------~~~~---------------~~~~l~~~~~~~l~~~~~~~~~~-~~~~~~~lp~~l~~~g~ 237 (393)
T PRK09705 185 AREV-ASSHK----------TTTT---------------PVRVVFTPRAWTLGVYFGLINGG-YASLIAWLPAFYIEIGA 237 (393)
T ss_pred cCCC-ccccC----------CCcC---------------CcccccCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC
Confidence 1010 00000 0000 011223343333 2222111111 11222335566777899
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhh
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHM 323 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw 323 (412)
++...|...+..+++++.|+.+.+++.+|+|.++...++.......... ....+.. ......++.|+ ..|.
T Consensus 238 s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~--~~~~~~~---~~~~~~~l~g~---g~g~- 308 (393)
T PRK09705 238 SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCG--FIWLPLQ---LPVLWAMVCGL---GLGG- 308 (393)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHH--HHHccch---HHHHHHHHHHH---hccc-
Confidence 9999999999999999999999999999999988877665433222111 1111211 11121222222 2233
Q ss_pred hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015174 324 SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV-SHFGFLATLSLLSVVGAAWMFCHWLLNPTD 400 (412)
Q Consensus 324 ~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~-~~f~~l~~~s~~~v~~~~~~~~~~~~~~~~ 400 (412)
.++.......|+..|++++|++.|..+++.+....+.+.+.....|. ..+.....+..+....+......+..++||
T Consensus 309 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 309 AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 34556666677766778999999999999988766666665444443 334444444333333344444444444443
No 38
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.62 E-value=1.7e-12 Score=131.14 Aligned_cols=301 Identities=15% Similarity=0.053 Sum_probs=156.9
Q ss_pred HHHHHHhhhhhcchhccCCcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
.+...+++++.|.+.||++|||. +..+.+.-.+. +. ...+... . +.+++...+.+..+.... ...
T Consensus 61 ~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~~~~~~~~~-~~~ 126 (393)
T PRK15011 61 AVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLA----CT--LFAWNRN------Y-FVLLFVGVFLSSFGSTAN-PQM 126 (393)
T ss_pred HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHH----HH--HHHHhhH------H-HHHHHHHHHHHHHHHhhH-HHH
Confidence 35567788898888999988876 55554422111 11 1112110 1 223333334444444333 333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.++.+|| .+++ +.+....|+..+....++.++||+++|.+...+||+..|++.+...++... .....+|
T Consensus 127 ~~~~~~~----~~~~-~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~------~~~~~~~ 195 (393)
T PRK15011 127 FALAREH----ADKT-GREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGV------MVWLFLP 195 (393)
T ss_pred HHHHHHH----hhhc-cchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHH------HHHhhcC
Confidence 3444453 2322 113456778899899999999999999999989999887654433333221 1112234
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCC-cchHHHHHHHHHHHhhhccchHHHHHHH-hcC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLT-QRG 242 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~g 242 (412)
|.. ++++.+ + + + .+ ..+ +++ .....+....+.......+....+.|.+ ++|
T Consensus 196 ~~~--~~~~~~----~----~--~--------~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~ 248 (393)
T PRK15011 196 SMR--KELPLA----T----G--T--------LE----APR---RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELH 248 (393)
T ss_pred ccC--CCCccc----c----c--c--------cc----ccc---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 311 111100 0 0 0 00 000 111 1111111111111101112233556775 589
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH-HHHHHHHHhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL-FFLCLIVLSRLG 321 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~-l~~~g~~~sr~G 321 (412)
+++...|.+.+...+.++.+.++.+++.+|+|++|....+....... .......+. ...... .+..++ ..|
T Consensus 249 ~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~l~~~~l~~~---~~g 320 (393)
T PRK15011 249 LPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCF---YAGMLMAHS--PAILLGLQLLNAI---YIG 320 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHH---HHHHHHHhh--HHHHHHHHHHHHH---HHH
Confidence 99999999999888889999999999999999988766554321111 111111221 011111 111111 122
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
. .... .....||..|+ ++|++++..++.++....+...++....+
T Consensus 321 ~-~~~~-~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~ 365 (393)
T PRK15011 321 I-LGGI-GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAE 365 (393)
T ss_pred H-HHHH-HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 1122 23446776665 69999999888877655555555544444
No 39
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.61 E-value=1.3e-12 Score=134.54 Aligned_cols=319 Identities=12% Similarity=0.014 Sum_probs=160.0
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||++||+++..+.+...+...+ ..+..... + ..+.+++..++.|..+........
T Consensus 72 ~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~----~~~~~~~~---~--~~~~~~~~~~l~gi~~g~~~~~~~ 142 (452)
T PRK11273 72 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLF----MGFVPWAT---S--SIAVMFVLLFLCGWFQGMGWPPCG 142 (452)
T ss_pred HHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHH----HHhhhccc---c--cHHHHHHHHHHHHHHHhccchHHH
Confidence 45677889999999999999999988886544332111 11111110 0 112233333445555444433222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
..+. | .++++ +..+.++.......++. +.+|++++.+....+|+.++++.+...++.... ....+++.
T Consensus 143 ~~~~-~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l---~~~~~~~~ 211 (452)
T PRK11273 143 RTMV-H----WWSQK---ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF---AFAMMRDT 211 (452)
T ss_pred HHHH-H----hCChH---HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH---HHHHccCC
Confidence 2232 3 34432 67788888777777775 667776555544568998887654433332211 11112222
Q ss_pred cccccccccccccccC-CCCCCCCCCchhhhHHhHHHHHHhH-HHHhcCCcchHHHHH-HHHHHHhhhccchHHHHHHHh
Q 015174 164 SSGVLDRAKCSQSCCR-TSNEGPVPDADNIVDVGIEAIKLGW-KEYMQQPVLPASLAY-VLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~-a~l~~t~v~~~~~~~~~y~~~ 240 (412)
|+.. ..+++.+...+ +++.++..+ + + .+..+.+ +..+++|.++..... .+.+.. ..+.....+.|+++
T Consensus 212 ~~~~-~~~~~~~~~~~~~~~~~~~~~-~---~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~P~~l~~ 282 (452)
T PRK11273 212 PQSC-GLPPIEEYKNDYPDDYNEKHE-Q---E---LTAKQIFMQYVLPNKLLWYIAIANVFVYLL-RYGILDWSPTYLKE 282 (452)
T ss_pred Hhhc-CCCChhhhhhccccccccccC-C---C---ccHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 2110 00000000000 000000000 0 0 0122333 236788887764333 333322 13334457778875
Q ss_pred -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHHHHHH
Q 015174 241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLCLIVL 317 (412)
Q Consensus 241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~g~~~ 317 (412)
+|+++...+......+++++.|+++.+++.+|++.+|......... .+.......++......... ..++..|.
T Consensus 283 ~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~-- 359 (452)
T PRK11273 283 VKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFM-TLVTIATIVYWLNPAGNPTVDMACMIVIGF-- 359 (452)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHH-HHHHHHHHHHHHhcccChHHHHHHHHHHHH--
Confidence 7999999999999999999999999999999995433211111110 11111111111111000011 11121221
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l 358 (412)
+............++..|++++|+++|..++..++...
T Consensus 360 ---~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ 397 (452)
T PRK11273 360 ---LIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGS 397 (452)
T ss_pred ---HHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHH
Confidence 11111112233457888999999999999988877543
No 40
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.60 E-value=5.4e-12 Score=131.62 Aligned_cols=305 Identities=14% Similarity=0.002 Sum_probs=170.3
Q ss_pred HHHHHHhhhhhcchhccC-----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHH
Q 015174 6 KLILIVGGPLVGKLMDHS-----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLT 79 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~-----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~ 79 (412)
.+|+ .+.+..|.++||+ +|||. +..+.+.-.+ +.. ...+.. +. + .. +.++...++.+......
T Consensus 56 ~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~----~~~--~~a~~~-~~-~-~l-~~l~~~~~l~~~~~a~~ 124 (491)
T PRK11010 56 GQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV----AIA--AMGFLE-PG-T-QL-RWLAALAVVIAFCSASQ 124 (491)
T ss_pred HHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH----HHH--HHHHcC-Cc-c-hH-HHHHHHHHHHHHHHHHH
Confidence 3444 5788899999998 77775 5555442211 111 111111 11 1 02 22333344455555555
Q ss_pred hhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 80 GVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 80 ~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~ 158 (412)
+.+.+ ++.-| .++++ +..+.|+.......++.++||.+++.+.+ ..||+..|++.+....+... .
T Consensus 125 ~i~~~-a~~~~----~~~~~---~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l-----~- 190 (491)
T PRK11010 125 DIVFD-AWKTD----VLPAE---ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCII-----A- 190 (491)
T ss_pred HHHHH-HHHHH----hcChh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHH-----H-
Confidence 54443 23334 45543 68899999999999999999999999999 57999998775544433321 1
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015174 159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL 238 (412)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~ 238 (412)
.. .++|+. ++++. + + + ..+...+.++.++++|..+..+....++.............|+
T Consensus 191 ~~-~~~e~~--~~~~~-----~----~--~-------~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l 249 (491)
T PRK11010 191 TL-LAPEPT--DTIPV-----P----K--T-------LEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFL 249 (491)
T ss_pred HH-hcCCCc--ccccc-----c----c--c-------hhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 234321 10000 0 0 0 0011234566677777655443333344110112223344565
Q ss_pred -HhcCCCCchhHHHh-hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH--HHHHHH
Q 015174 239 -TQRGLNPSIIGGFS-GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL--LFFLCL 314 (412)
Q Consensus 239 -~~~gls~~~~G~~~-~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~--~l~~~g 314 (412)
+++|+|+.++|... ..+.++++.|+++.+++.+|+|.+|...++...+.+...........++ + ...+ ..++..
T Consensus 250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~-~-~~~l~~~~~l~~ 327 (491)
T PRK11010 250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDK-N-LYSMGAAVFFEN 327 (491)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccc-c-HHHHHHHHHHHH
Confidence 46899999999998 5777899999999999999999988776655444332222111111111 1 1111 111100
Q ss_pred HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 315 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 315 ~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
+ ..|+ .......+..+.++++..|+..|..+++.+....+...+
T Consensus 328 ~---~~g~--~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~ 371 (491)
T PRK11010 328 L---CGGM--GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV 371 (491)
T ss_pred H---HHHH--HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122 223345667778899999999999999887755433333
No 41
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.60 E-value=2.3e-12 Score=132.03 Aligned_cols=325 Identities=9% Similarity=-0.107 Sum_probs=167.4
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++..+.+++.|.+.||++||+++..+.+.-.+. +. +..+... . +.+++.-++.|...........
T Consensus 67 ~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~g~~~g~~~~~~~ 133 (434)
T PRK11663 67 FYITYGVSKFVSGIVSDRSNARYFMGIGLIATGII----NI--LFGFSSS------L-WAFALLWVLNAFFQGWGWPVCA 133 (434)
T ss_pred HHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHH----HH--HHHHHhH------H-HHHHHHHHHHHHHHHccchHHH
Confidence 45678889999999999999999987775532211 11 1111110 1 2233333334444433333322
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
++..| .++++ +..++++.......++.+++|.++|.+....+|+..+.+.+........ ... ..++
T Consensus 134 -~~~~~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~---~~~---~~~~ 199 (434)
T PRK11663 134 -KLLTA----WYSRT---ERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL---FLC---WRLR 199 (434)
T ss_pred -HHHHH----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH---HHH---HHcC
Confidence 22234 34543 6888999999999999999999999999999999987654433322211 111 1223
Q ss_pred cccccccccc--ccccCCCCCCCCCCchhhhHHhHHHHHHhHH-HHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHH-
Q 015174 165 SGVLDRAKCS--QSCCRTSNEGPVPDADNIVDVGIEAIKLGWK-EYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLT- 239 (412)
Q Consensus 165 ~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~- 239 (412)
|+...+..+. ++..++++..++.+.. ..+..+-++ ..+++|.++.... ....++. ...+....+.|++
T Consensus 200 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~l~~ 272 (434)
T PRK11663 200 DKPQAMGLPSVGEWRHDALELAQQQEGA------GLSRKEILTKYVLLNPYIWLLSFSYVLVYVV-RAAINDWGNLYMSE 272 (434)
T ss_pred CCHhhcCCCCcccccccccccchhcccc------CCChhhhHHHHHhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHh
Confidence 2110000000 0000000000000000 001112222 3567776665332 2222222 1223344567775
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI--LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~--~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
++|+|+.+.+...+...+++++|.++.+++.+|+.. ++........-......+. ...+.. + .........++
T Consensus 273 ~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~-- 347 (434)
T PRK11663 273 TLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSL-WLMPFA-S-YVMQAACFFTI-- 347 (434)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHH-HHcccc-c-HHHHHHHHHHH--
Confidence 589999999999999999999999999999999832 2222111111011111111 111111 1 11111111111
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.++...-.........|..|++++|+++|+.++..+....+.+.+.....+
T Consensus 348 -g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~ 398 (434)
T PRK11663 348 -GFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE 398 (434)
T ss_pred -HHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 111100011122345677789999999999999999866665555444333
No 42
>PRK10504 putative transporter; Provisional
Probab=99.59 E-value=6.3e-12 Score=129.61 Aligned_cols=318 Identities=12% Similarity=0.002 Sum_probs=176.4
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++|||++..+.+.-.+. .. ...+... . +.+++.-++.|...........
T Consensus 55 ~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~l~g~~~~~~~~~~~- 120 (471)
T PRK10504 55 VLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG----SL--FCALSGT------L-NELLLARVLQGVGGAMMVPVGR- 120 (471)
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH----HH--HHHHhCC------H-HHHHHHHHHHHhhhHHHHHHHH-
Confidence 4566778899999999999999987764432221 11 1112111 1 2233333444444433332222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
++..| .++++ +..+.++..+....++..+||.++|.+.+..+|+..|.+......+..... ....|+
T Consensus 121 ~~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~------~~~~~~ 187 (471)
T PRK10504 121 LTVMK----IVPRE---QYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIAT------LMLMPN 187 (471)
T ss_pred HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH------HHhCCC
Confidence 22234 34432 678899999999999999999999999999999998876554444333211 111222
Q ss_pred cccccccccccc---------------cCCCCCCCCCCchhhhHH------------hHHHHH-----HhHHHHhcCCcc
Q 015174 166 GVLDRAKCSQSC---------------CRTSNEGPVPDADNIVDV------------GIEAIK-----LGWKEYMQQPVL 213 (412)
Q Consensus 166 ~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~------------~~~~~~-----~g~~~~~~~~v~ 213 (412)
... ++++.+.. .++ ++..... ...... ..++.. -.+ .++|||.+
T Consensus 188 ~~~-~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~ 263 (471)
T PRK10504 188 YTM-QTRRFDLSGFLLLAVGMATLTLALDG-SKGLGLS-PLAIAGLVAVGVVALLLYLLHARNNNRALFSL-KLFRTRTF 263 (471)
T ss_pred ccc-cCCCCChHHHHHHHHHHHHHHHHHhc-CCcCCcc-hHHHHHHHHHHHHHHHHHHHHHhcCCCCccCH-HHhcccch
Confidence 111 11110000 000 0000000 000000 000000 012 26788888
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH
Q 015174 214 PASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAM 292 (412)
Q Consensus 214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~ 292 (412)
+..+...+++...........+.|.++ +|.++...|+......++.+.+..+.+++.+|+|.++...++.....+.
T Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~--- 340 (471)
T PRK10504 264 SLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALV--- 340 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHH---
Confidence 876665555522112233345667764 8999999999999999999999999999999999988877665432222
Q ss_pred HHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 293 AVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 293 ~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
+....+.+... ...... ...++.++|........+.+.++.+|++++|+.+|+.+..+.....+.
T Consensus 341 ~~~~~~~~~~~-~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig 405 (471)
T PRK10504 341 SLLFMLVALLG-WYYLLP--FVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIG 405 (471)
T ss_pred HHHHHhccccc-cHHHHH--HHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHH
Confidence 11111211111 111111 111122223322445666778888999999999999999887744333
No 43
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.59 E-value=2.5e-12 Score=129.40 Aligned_cols=215 Identities=14% Similarity=0.124 Sum_probs=133.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 015174 103 ALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN 182 (412)
Q Consensus 103 ~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 182 (412)
+..+..+.++..-.++.++||.++|.+.+..||+..+++.....+ .. . ... ..+| +++++++. + +
T Consensus 125 ~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~---~--~~~--~~~~-~~~~~~~~--~----~ 189 (382)
T TIGR00902 125 QFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FM---L--IGF--LIKP-TIPPKDAI--P----E 189 (382)
T ss_pred HcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HH---H--HHH--HcCC-CCCCCccc--c----c
Confidence 455678889999999999999999999999999988765322211 11 1 111 1122 11111110 0 0
Q ss_pred CCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHH
Q 015174 183 EGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAA 262 (412)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllG 262 (412)
++ + . ..+.++..+|||.++.......++......+.+..+.|++++|.|+..+|.+.+.++++.+.+
T Consensus 190 -~~--~------~----~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~ 256 (382)
T TIGR00902 190 -DE--S------Q----GDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIII 256 (382)
T ss_pred -cc--c------c----cchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHH
Confidence 00 0 0 012466788999887755444443211234455567788889999999999999999999999
Q ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccc
Q 015174 263 TFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKA 342 (412)
Q Consensus 263 t~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~ 342 (412)
....+++.+|+|.++...++.....+..... .+.+ . .........+-...+|+ +-.+..++.|+. |++++
T Consensus 257 ~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~--~~~~-~----~~~~~~~q~l~g~~~~~--~~~~~~~~i~~~-~~~~~ 326 (382)
T TIGR00902 257 FAFSNKLFQNCSARDLLLISAIACVGRWAII--GAIE-A----FPLIFLLQILHCGTFAV--CHLAAMRYIAAQ-PGSEI 326 (382)
T ss_pred HHHhHHHHhhCCHHHHHHHHHHHHHHHHHHH--HhHh-h----HHHHHHHHHHHHHHHHH--HHHHHHHHHHhC-CHhhH
Confidence 9999999999999998877765433222211 2211 1 11111111111112344 445566677777 99999
Q ss_pred hhHHHHHHHHHHH
Q 015174 343 NLIGTTEISVASL 355 (412)
Q Consensus 343 G~v~g~~~sl~~~ 355 (412)
++..++++++.++
T Consensus 327 ~~~q~~~~~~~~g 339 (382)
T TIGR00902 327 AKLQALYNALAMG 339 (382)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876655
No 44
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.58 E-value=2.7e-12 Score=132.31 Aligned_cols=324 Identities=12% Similarity=0.039 Sum_probs=179.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..++.++..++.|.+.||++||+++..+.+...+. .. ....... . +.+++.-++.|...........
T Consensus 46 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~~G~~~~~~~~~~~ 112 (485)
T TIGR00711 46 YMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG----SL--LCGVAPN------L-ELMIIFRVIQGFGGGPLIPLSF 112 (485)
T ss_pred HHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHhCcCC------H-HHHHHHHHHHHhhhhhHHHHHH
Confidence 45677888999999999999999988886644332 11 1111111 1 2333334445554444443333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
. +..| .++++ +..++++.......++..+||.++|.+.+..+|+..+++......+.... .....|
T Consensus 113 ~-~i~~----~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~------~~~~~~ 178 (485)
T TIGR00711 113 S-TLLN----IYPPE---KRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVV------AFFILP 178 (485)
T ss_pred H-HHHH----HCCHH---HHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHH------HHHHcC
Confidence 2 2234 45542 67889999999999999999999999999999999887654444333321 111223
Q ss_pred ccccccccccccc----------------cCCCCCCCCCCchhhhHH-----------hHHHHH-----HhHHHHhcCCc
Q 015174 165 SGVLDRAKCSQSC----------------CRTSNEGPVPDADNIVDV-----------GIEAIK-----LGWKEYMQQPV 212 (412)
Q Consensus 165 ~~~l~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~-----------~~~~~~-----~g~~~~~~~~v 212 (412)
|+..+++++.+.. .+.++++...+ .+.... ..++.+ ..+ ..+++|.
T Consensus 179 ~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 256 (485)
T TIGR00711 179 RDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDS-NEILILSITGLVAIIAFVVWELTDDNPLVDL-RLFKYRN 256 (485)
T ss_pred CccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHcCCCCccCH-HHHcCCC
Confidence 3111110100000 00000000000 000000 000000 011 2466776
Q ss_pred chHHHHHHHHH-HHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q 015174 213 LPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL 290 (412)
Q Consensus 213 ~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l 290 (412)
+........++ +. ........+.|+++ .|+++.+.|+......++.++++.+.+++.+|+|+++...++........
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~ 335 (485)
T TIGR00711 257 FTIGCVYMSLLGLG-LYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGF 335 (485)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Confidence 66644333222 21 12223345667765 79999999999999999999999999999999999887766654322111
Q ss_pred HHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 291 AMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 291 ~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
.. ......+. .+.........+.++|.-..........|+.+|++++|+++|+.+..++....+...+
T Consensus 336 ~~--~~~~~~~~---~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i 403 (485)
T TIGR00711 336 YW--RAFTFTPD---TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTAL 403 (485)
T ss_pred HH--HhccCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111110 1111111122222334333445566677888999999999999999998755444433
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.58 E-value=4e-12 Score=131.70 Aligned_cols=326 Identities=13% Similarity=0.100 Sum_probs=172.5
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+.+++.|.+.||++||+++..+.+...+. +. ...+.. ..+.+++..++.|............
T Consensus 65 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~ 131 (496)
T PRK03893 65 FISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVG----TL--ACGFAP-------GYWTLFIARLVIGMGMAGEYGSSAT 131 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHHh-------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778899999999999999988776544332 11 111111 1123444444555554444333332
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
.+ .| .++++ +..+.++.......++.+++|.+++.+....+|+..+++.+ +..... +....+.||
T Consensus 132 ~~-~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~----~~~~~~---~~~~~~~p~ 196 (496)
T PRK03893 132 YV-IE----SWPKH---LRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGI----LPIIFA---LWLRKNLPE 196 (496)
T ss_pred HH-HH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH----HHHHHH---HHHHHhCCC
Confidence 22 23 45543 68889999999999999999999999999999998875422 211111 111234444
Q ss_pred cccccccccccccCCCCCCCCCCchhhh----HHhHH---------HHHHhHHHHh------------------------
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIV----DVGIE---------AIKLGWKEYM------------------------ 208 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------~~~~g~~~~~------------------------ 208 (412)
+... ++++ +. ++ ...+..+.. +.... .....+....
T Consensus 197 ~~~~-~~~~-~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (496)
T PRK03893 197 AEDW-KEKH-AG-KA----PVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQS 269 (496)
T ss_pred chhh-hhhc-cc-cc----cchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHh
Confidence 2110 0000 00 00 000000000 00000 0000000000
Q ss_pred ---cCCcchHHHHHHHHH-HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015174 209 ---QQPVLPASLAYVLLC-LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 283 (412)
Q Consensus 209 ---~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~ 283 (412)
+.|.+. .+.....+ +..........+.|++ ++|+++.+.|.+.....+++++|+.+.+++.+|+|+++....+.
T Consensus 270 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~ 348 (496)
T PRK03893 270 SGKRWPTGV-MLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSL 348 (496)
T ss_pred cccchhHHH-HHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 000000 00000011 0000112235677886 68999999999999999999999999999999999988866554
Q ss_pred HHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 284 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 284 ~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
........ ......... ................| .......+.|+.+|+++||++.|++.+.++....+...+
T Consensus 349 ~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l 421 (496)
T PRK03893 349 LISQLLII---PVFAIGGAN-VWVLGLLLFFQQMLGQG---ISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPIL 421 (496)
T ss_pred HHHHHHHH---HHhhccccH-HHHHHHHHHHHHHHhcc---cchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHH
Confidence 33221111 111111111 01111111111011112 223455678999999999999999999998866666666
Q ss_pred HHhccCCCchh
Q 015174 364 AIIANDVSHFG 374 (412)
Q Consensus 364 ~~~~~~~~~f~ 374 (412)
.....+.....
T Consensus 422 ~g~l~~~~g~~ 432 (496)
T PRK03893 422 GALIAQRLDLG 432 (496)
T ss_pred HHHHhccCChH
Confidence 55544433333
No 46
>PRK10054 putative transporter; Provisional
Probab=99.58 E-value=2.6e-12 Score=130.12 Aligned_cols=314 Identities=12% Similarity=-0.015 Sum_probs=176.5
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+..+++.++.|.+.||++||+++..+.+...+. ++ .+.+... . +.+++...+.+.....+....+
T Consensus 53 ~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~- 118 (395)
T PRK10054 53 LTIGVVFSLGFGILADKFDKKRYMLLAITAFASG----FI--AIPLVNN------V-TLVVLFFALINCAYSVFSTVLK- 118 (395)
T ss_pred HHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHH----HH--HHHHHhH------H-HHHHHHHHHHHHHHHHHHHHHH-
Confidence 3567788999999999999999988776644322 21 1222211 1 2233323334443333333222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
.|....++++ +..+.++.......++..+||.++|.+.. .+|+..|.+.+...++... +.. ..+++
T Consensus 119 ----~~~~~~~~~~---~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i----~~~--~~~~~ 184 (395)
T PRK10054 119 ----AWFADNLSST---SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLV----FIQ--IWVQR 184 (395)
T ss_pred ----HHHHHhcCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHH----HHH--HHHhc
Confidence 2444466643 78899999999999999999999999986 6899887654433333321 111 11222
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHH---Hhc
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFL---TQR 241 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~---~~~ 241 (412)
+.+ ++++ + + ++. ...+..+|||.++.......++ +. ...+......|. .+.
T Consensus 185 ~~~--~~~~----------~--~-----~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~ 239 (395)
T PRK10054 185 SEK--AIAT----------E--T-----GSV-----WSPSVLLQDKALLWFTCSGFLASFV-SGAFASCISQYVMVVADS 239 (395)
T ss_pred ccc--cccc----------c--h-----hhh-----hhhhhhccCceehHHHHHHHHHHHH-HHHhhhhHHHHHHHhccc
Confidence 111 0000 0 0 000 1235678889887744433332 11 111222234444 346
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
+.++..+|.+...+++..+......+++.+|.+.++...++........... .+..++ ...++ ...+...+|
T Consensus 240 ~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~----~~~~~--~~~~~~~~g 311 (395)
T PRK10054 240 DFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGF--IFSGNS----LLLWG--MSAAVFTVG 311 (395)
T ss_pred chHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHH--HHcchH----HHHHH--HHHHHHHHH
Confidence 7888899999999998888888888899999998877666654322221111 111111 11111 122233344
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS 380 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s 380 (412)
....-.+.....++.+|++++|+..+.++....+..+...+.+.+...-.......+++
T Consensus 312 ~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~ 370 (395)
T PRK10054 312 EIIYAPGEYMLIDHIAPPGMKASYFSAQSLGWLGAAINPLVSGVILTTLPPWSLFVILA 370 (395)
T ss_pred HHHHHhhHHHHHHHhCCcccceehHhHHHHHHHHHHHHHHHHHHHHHHcChhhHHHHHH
Confidence 43333455667888899999999998776333344455555555555444444444444
No 47
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.58 E-value=1.1e-11 Score=124.74 Aligned_cols=235 Identities=17% Similarity=0.070 Sum_probs=135.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCC
Q 015174 103 ALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSN 182 (412)
Q Consensus 103 ~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 182 (412)
+....|+.....-.++.++|+.+.|.+.+..||+..|++.+...++.... . ...+|++.+ +++
T Consensus 130 ~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~------~-~~~~~~~~~--~~~-------- 192 (390)
T TIGR02718 130 TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVC------V-LWLKDRAVA--SPE-------- 192 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH------H-HHcCCCCcC--ccc--------
Confidence 55667776666667778888888888999999999887765554443321 1 112221110 000
Q ss_pred CCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHH-HHHHH
Q 015174 183 EGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCA-SMGVA 261 (412)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~a-vggll 261 (412)
+ + + . ..+.++.++|+|.++..+....++........+....|++++|+|++++|+..+..+ +.++.
T Consensus 193 --~--~-~----~----~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~ 259 (390)
T TIGR02718 193 --A--P-L----A----RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLL 259 (390)
T ss_pred --c--c-h----h----hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHH
Confidence 0 0 0 0 112466788999887766555555221122334456788889999999999998876 57788
Q ss_pred HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCccc
Q 015174 262 ATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSK 341 (412)
Q Consensus 262 Gt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~ 341 (412)
|.++.+++.+|+|.+|...++...+................+ ..........+.....|. .+.......++...|+++
T Consensus 260 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~ 337 (390)
T TIGR02718 260 GCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAP-GIAVAWSCSAFGSLITGI-TSVAIYTAFMRFAGDGDQ 337 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCC-cHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcccc
Confidence 999999999999999988776654422221111111100000 111111111110001233 233333344444334589
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 342 ANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 342 ~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+|+..+.++++++....+...+.....+
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~~~G~l~~ 365 (390)
T TIGR02718 338 AGTDVTAVQSTRDLGELIASSIAGYLTD 365 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998866666655544443
No 48
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.56 E-value=2.3e-12 Score=127.85 Aligned_cols=310 Identities=13% Similarity=0.003 Sum_probs=156.9
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-ccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTS-SSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
++..+.+++.|.+.||++|||++..+.+...+. +. ...+...-.. ..+....+++.-++.|........+..
T Consensus 46 ~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~- 118 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGRKKTLVITLLMMGIG----TL--LIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAA- 118 (394)
T ss_pred HHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHH----HH--HHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccH-
Confidence 344567889999999999999988886654332 21 1111111000 000000112222233333222222222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcChhHHHHHHHHHHHHHHHHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS--------KYEPVTCLKFAAGLIMWSLPVMIILT 157 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~--------~~~~~~~~~~~~~~~~~s~~~~~~~l 157 (412)
+...| .++++ +..+.++.......++.+++|.+++.+.. ..+|+..+.+......+..
T Consensus 119 ~~~~~----~~~~~---~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~------- 184 (394)
T TIGR00883 119 LYLAE----YAPPG---KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL------- 184 (394)
T ss_pred HHhhh----cCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHH-------
Confidence 22223 45543 56778888888888888888888776643 4678877654333222221
Q ss_pred HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc--chHHHHHHHHH-HHhhhccchHH
Q 015174 158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV--LPASLAYVLLC-LNVVLTPGSLM 234 (412)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v--~~~~~~~a~l~-~t~v~~~~~~~ 234 (412)
....+.+|+ ++.++++ + + ++ ++ .+.++..++++. ++.......+. .. ........
T Consensus 185 ~~~~~~~~~-~~~~~~~--~--~-~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 242 (394)
T TIGR00883 185 YLRRNLEET-PVFEKAQ--E--K-HK---KK------------RGPIRETLTKHRKPFLLGLGLVIATTTT-FYLITTYL 242 (394)
T ss_pred HHHHhcCCC-hhHHHHH--h--c-cc---cc------------cCCHHHHHHhchHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 111233331 1111100 0 0 00 00 011222333333 33322222222 11 12223345
Q ss_pred HHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 235 TAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 235 ~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
+.|.+ ++|.++...+.......++++++..+.+++.+|+|+++...........+..... .......+ ... +..
T Consensus 243 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~--~~~ 317 (394)
T TIGR00883 243 PTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLL-MALLDSGS--FTL--FFF 317 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHH-HHHhcCCc--hHH--HHH
Confidence 66774 5899999999999999999999999999999999998876544332221111111 11111111 111 111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH-HHHHHHHHHH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS-LVESVMLGVA 364 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~-~~~ll~~~~~ 364 (412)
.......+............+|.+|+++||++.+....+.+ ....+.+.+.
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~ 369 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA 369 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH
Confidence 11222222223455677888999999999999998655543 3332333333
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.56 E-value=4.7e-12 Score=123.24 Aligned_cols=282 Identities=18% Similarity=0.052 Sum_probs=178.6
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
...++..+..++.|.+.||++|||.+..+.+...+.... .... . ..+..++..++.|..........
T Consensus 42 ~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~------~~~~-~------~~~~~~~~~~l~g~~~~~~~~~~ 108 (352)
T cd06174 42 AFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL------LAFA-S------SLWLLLVGRFLLGLGGGALYPAA 108 (352)
T ss_pred HHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH------HHHh-c------cHHHHHHHHHHHHcccccccHhH
Confidence 345778889999999999999999988887766443221 1111 1 11233444445555554444433
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
.. +..| .++++ +..+.++.......++..++|.+++.+.+..+|+..+++.....++..... ...
T Consensus 109 ~~-~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 173 (352)
T cd06174 109 AA-LIAE----WFPPK---ERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLL----LFL--- 173 (352)
T ss_pred HH-HHHH----hCCcc---chhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH----HHH---
Confidence 32 2234 56653 788999999999999999999999999998899987765444333332110 000
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-c
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-R 241 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~ 241 (412)
+ |.++........+ .. ...+....+.|.++ .
T Consensus 174 ------------------------------~----------------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 206 (352)
T cd06174 174 ------------------------------L----------------RLLLLLALAFFLLSFG-YYGLLTYLPLYLQEVL 206 (352)
T ss_pred ------------------------------H----------------HHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHhc
Confidence 0 1122211111111 11 12223335556665 4
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-AGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r-~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
|.++.+.|...+...++.+.+..+.+++.+|+|.++ ....+.....++.... .. ... .... .........
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~~---~~~~---~~~~~~~g~ 277 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL--AL-APS---LALL---LVALLLLGF 277 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH--HH-hcc---HHHH---HHHHHHHHH
Confidence 999999999999999999999999999999999988 7666654332222211 11 111 0111 112222233
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+............|+.+|+++||++.|..+..++....+.........+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 278 GLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3334667888899999999999999999999999977777666655543
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=99.56 E-value=9.2e-12 Score=128.01 Aligned_cols=307 Identities=11% Similarity=0.013 Sum_probs=171.2
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHH-hccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHA-HTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA 82 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a 82 (412)
...+.+.+.+++.|.++||++|||++..+.++-.+. +. ... ....+ ..+.+++.-++.|......+++
T Consensus 69 ~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~----~~--l~~~~~~a~-----~~~~ll~~r~l~G~g~g~~~~~ 137 (438)
T PRK10133 69 AFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALG----AA--LFWPAAEIM-----NYTLFLVGLFIIAAGLGCLETA 137 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHHHhcC-----CHHHHHHHHHHHHHHHHHHHhh
Confidence 345678889999999999999999988886644332 21 111 11111 1123444455666666666665
Q ss_pred hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-h-------------------------cChh
Q 015174 83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-K-------------------------YEPV 136 (412)
Q Consensus 83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~-------------------------~~~~ 136 (412)
....+ +| ..+++ +-.+..+..+....++..+||.+|+.+.. . .+|+
T Consensus 138 ~~~~v-~~----~~~~~---~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~ 209 (438)
T PRK10133 138 ANPFV-TV----LGPES---SGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQ 209 (438)
T ss_pred HHHHH-HH----hCChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHH
Confidence 54433 35 43332 34445778888889999999999987761 1 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH
Q 015174 137 TCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS 216 (412)
Q Consensus 137 ~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 216 (412)
..|+.... ...... ++...++.||.+ .+++. + ++ .++..+.++..+++|.++..
T Consensus 210 ~~f~~~~~--v~~~~~---~~~~~~~~p~~~--~~~~~----------~-~~--------~~~~~~~~~~ll~~~~~~~~ 263 (438)
T PRK10133 210 TPYMIIVA--IVLLVA---LLIMLTKFPALQ--SDNHS----------D-AK--------QGSFSASLSRLARIRHWRWA 263 (438)
T ss_pred HHHHHHHH--HHHHHH---HHHHHhcCCCCC--ccccc----------c-cc--------ccchhhhHHHHHhCchHHHH
Confidence 33321111 111111 111222333311 00100 0 00 01123456778899988765
Q ss_pred HHHHHHHHHhhhccchHHHHHH-H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH
Q 015174 217 LAYVLLCLNVVLTPGSLMTAFL-T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV 294 (412)
Q Consensus 217 ~~~a~l~~t~v~~~~~~~~~y~-~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v 294 (412)
.....++.............|+ + .+|+|+...|+.+....+++++|.++.+++.+|+|.+|...++........ ..
T Consensus 264 ~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~--~~ 341 (438)
T PRK10133 264 VLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALC--LI 341 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH--HH
Confidence 4443444221111111234564 3 479999999999999999999999999999999999998776654322111 11
Q ss_pred HHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH-HHHHHHHHHhc
Q 015174 295 AVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV-ESVMLGVAIIA 367 (412)
Q Consensus 295 ~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~-~ll~~~~~~~~ 367 (412)
..+.++. .....+.+.|+ ..|. +++...+...+. .+++.|..+++.. ++... .++..+.+.+.
T Consensus 342 ~~~~~~~---~~~~~~~l~gl---g~~~-i~P~~~s~a~~~--~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 342 SAFAGGH---VGLIALTLCSA---FMSI-QYPTIFSLGIKN--LGQDTKYGSSFIV-MTIIGGGIVTPVMGFVS 405 (438)
T ss_pred HHHcCCh---HHHHHHHHHHH---HHHH-HHHHHHHHHHcc--cchhhccchhHHh-HHhccchHHHHHHHHHH
Confidence 1222221 11111222222 3355 677777777777 6667888988886 45443 33333444333
No 51
>TIGR00895 2A0115 benzoate transport.
Probab=99.54 E-value=3e-12 Score=127.29 Aligned_cols=319 Identities=14% Similarity=0.041 Sum_probs=171.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+..++.+++.|.+.||++||+++..+.+...+. .. ...+... . +.+++..++.|...........
T Consensus 61 ~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~----~~--~~~~~~~------~-~~~~~~~~~~g~~~~~~~~~~~ 127 (398)
T TIGR00895 61 GLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVF----TL--LCALATN------V-TQLLILRFLAGLGLGGLMPNLN 127 (398)
T ss_pred HHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHH----HH--HHHHccc------h-HHHHHHHHHHhcccccchhhHH
Confidence 34567788899999999999999988876544332 11 1111111 1 2233334444444433333322
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
++..| .++++ +..+.++.......++..++|.++|.+.+..+|+..+++.+....+.... ....+|
T Consensus 128 -~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~------~~~~~~ 193 (398)
T TIGR00895 128 -ALVSE----YAPKR---FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL------LMRFLP 193 (398)
T ss_pred -HHHHH----HcCHH---hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH------HHHhCC
Confidence 23334 44432 67889999999999999999999999999999998776543333322211 111223
Q ss_pred ccccc-ccccccc-----------ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH----HHhhh
Q 015174 165 SGVLD-RAKCSQS-----------CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC----LNVVL 228 (412)
Q Consensus 165 ~~~l~-~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~----~t~v~ 228 (412)
|+... .+++.++ ..++.+ ...++ . +...+...+-++..++++..+....+...+ +. ..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 267 (398)
T TIGR00895 194 ESIDFLVSKRPETVRRIVNAIAPQMQAEAQ-SALPE-Q---KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVG-VY 267 (398)
T ss_pred CCChHHHhcCHHHHHHHHHHHHHhcccccc-ccccc-c---ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHH-HH
Confidence 21100 0000000 000000 00000 0 000111122344445554444422222111 11 11
Q ss_pred ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
......+.|.+++|.++...|...+...+++++|.++.+++.+|+|.++........ .++... ....... ....
T Consensus 268 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~---~~~~ 341 (398)
T TIGR00895 268 FLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLG-AVFAVL--VGSTLFS---PTLL 341 (398)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH-HHHHHH--HHHHhhC---HHHH
Confidence 112223344567899999999999999999999999999999999987433322211 111111 1111111 1111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
+. ..++.+++..........+.++.+|+++||++.|+..+..+....+...+++
T Consensus 342 ~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 342 LL---LGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 11 1111222333345567788899999999999999999998876665555443
No 52
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.54 E-value=5.1e-12 Score=130.40 Aligned_cols=365 Identities=9% Similarity=0.023 Sum_probs=185.9
Q ss_pred HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhhhhh
Q 015174 9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGVAV 87 (412)
Q Consensus 9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~~ai 87 (412)
..+.+++.|.+.||++||+++..+.+.-.+. +. ...+... . +.+++.. ++.|........... ++
T Consensus 67 ~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~~~~l~G~~~~~~~~~~~-~~ 132 (455)
T TIGR00892 67 LYAGGPISSILVNRFGCRPVVIAGGLLASLG----MI--LASFSSN------V-IELYLTAGFITGLGLAFNFQPSL-TM 132 (455)
T ss_pred HHHhhHHHHHHHHHcCchHHHHhhHHHHHHH----HH--HHHHhhh------H-HHHHHHHHHHHHhcchhhhhHHH-HH
Confidence 4567889999999999999988876543322 21 1112111 1 1222222 233433333222222 33
Q ss_pred cccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc
Q 015174 88 ERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV 167 (412)
Q Consensus 88 ~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~ 167 (412)
..|| +++ +..++++.......++..++|.++|.+....||+.+|++.....++.... ....++.++ .
T Consensus 133 ~~~~----~~~----~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~----~~~~~~~~~-~ 199 (455)
T TIGR00892 133 LGKY----FYR----RRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVC----GALMRPVGP-S 199 (455)
T ss_pred HHHH----HHh----hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH----HHHhCCCCc-c
Confidence 3454 332 46788899888889999999999999999999999887654443332211 111112111 1
Q ss_pred cccccccccccCCCCCCCCCCchhhhHHhHHHHHHhH-HHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCc
Q 015174 168 LDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGW-KEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPS 246 (412)
Q Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~ 246 (412)
.++.+..+++..+.+ .+.++..+ .+..++..+.. ..+++||.++..+....+..............|.+++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~ 276 (455)
T TIGR00892 200 QRVSKSKSKEGLPPD-GSTKKLSK--KSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEY 276 (455)
T ss_pred cccccccccccCCCC-Cccccccc--cchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHH
Confidence 000000000000000 00000000 01111222221 136788887764443332211012222345667778999999
Q ss_pred hhHHHhhHHHHHHHHHHHHHHHHHHH--hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015174 247 IIGGFSGLCASMGVAATFLSAYLVRR--LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324 (412)
Q Consensus 247 ~~G~~~~~~avggllGt~l~~~l~~R--~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~ 324 (412)
..|.+.++.+++.+.+..+.+++.+| ++.++...++...-...+......... . ....+++ ....+++...
T Consensus 277 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~---~~~~~i~---~~~~G~~~g~ 349 (455)
T TIGR00892 277 EAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-D---YTGLVIY---CIFFGLSFGS 349 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-h---HHHHHHH---HHHHHHHhch
Confidence 99999999999999999999999876 333333332221111111111111111 1 1111111 1111223333
Q ss_pred hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC-CCchh-HHHHHHHHHHHHHH-HHHHHH--hcCCC
Q 015174 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND-VSHFG-FLATLSLLSVVGAA-WMFCHW--LLNPT 399 (412)
Q Consensus 325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~-~~~f~-~l~~~s~~~v~~~~-~~~~~~--~~~~~ 399 (412)
.......+.++.+|++++|+..|+.++.++....+...+....-+ ..... ...+.++..+.++. ..+..+ .|+.+
T Consensus 350 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~~~~~~~~~~~ 429 (455)
T TIGR00892 350 VGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAIGNYINYRLLA 429 (455)
T ss_pred HHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667778888999999999999999998876666666554433 22222 22222222222222 122222 14445
Q ss_pred ccCCcccccCC
Q 015174 400 DEQRSLFSFDP 410 (412)
Q Consensus 400 ~~~~~~~~~~~ 410 (412)
.||++-..+|+
T Consensus 430 ~~~~~~~~~~~ 440 (455)
T TIGR00892 430 KEQKAALEREG 440 (455)
T ss_pred HHHHHHHhhcc
Confidence 66777776664
No 53
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.53 E-value=4.3e-12 Score=128.89 Aligned_cols=335 Identities=11% Similarity=0.003 Sum_probs=171.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||++||+++..+.+...+. +. +....... ...+.+++.-++.|..........
T Consensus 80 ~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~----~~--~~~~~~~~----~~~~~~~~~r~l~G~~~~~~~~~~- 148 (481)
T TIGR00879 80 FLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIG----AI--LMGLAAFA----LSVEMLIVGRVLLGIGVGIASALV- 148 (481)
T ss_pred HHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHH----HH--HHHHhccc----cchHHHHHHHHHHHhhhhHHHhHH-
Confidence 45677889999999999999999988876654332 11 11111110 011233344445555444444433
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH---HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF---GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTN 161 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg---G~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 161 (412)
.++..| .++++ +..++++.......++.+++|.++ +.+....+|+..+++.....+.... ...
T Consensus 149 ~~~i~~----~~~~~---~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~-------~~~ 214 (481)
T TIGR00879 149 PMYLSE----IAPKA---LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFL-------GLF 214 (481)
T ss_pred HHHHHc----cCChh---hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHH-------HHh
Confidence 233335 55543 678889999888999999999999 7766778999887763332222221 111
Q ss_pred hcccccc---ccccccc--cccCCCCCCCCCCc--hhhhHH-hH------HHHHHhHHHHhcCC--cchHHHHHHHHH-H
Q 015174 162 KISSGVL---DRAKCSQ--SCCRTSNEGPVPDA--DNIVDV-GI------EAIKLGWKEYMQQP--VLPASLAYVLLC-L 224 (412)
Q Consensus 162 ~~~~~~l---~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-~~------~~~~~g~~~~~~~~--v~~~~~~~a~l~-~ 224 (412)
.++|... .+++..+ +..++.++...++. .+.... .. +...+.|+..++.. ..+..+....++ +
T Consensus 215 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (481)
T TIGR00879 215 FLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWF 294 (481)
T ss_pred cCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHH
Confidence 2333110 0000000 00000000000000 000000 00 00001123333321 122222211111 1
Q ss_pred Hhhhc---cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 015174 225 NVVLT---PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGS 301 (412)
Q Consensus 225 t~v~~---~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~ 301 (412)
..... .....+.|.++.|+++...+.......++++.|+++.+++.+|+|+++...++.....++............
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (481)
T TIGR00879 295 QQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFV 374 (481)
T ss_pred HHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 10011 122234445678999988899999999999999999999999999988877665443333222211111111
Q ss_pred CcC---cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 302 LSQ---QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 302 ~~~---~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
.+. .....+....+.....+. .+......+.++..|+++||++.|..+..+++...+...+..
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~ 440 (481)
T TIGR00879 375 TGSSKSSGNVAIVFILLFIAFFAM-GWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFP 440 (481)
T ss_pred CCcccchhHHHHHHHHHHHHHHHc-cccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 011111111122222222 222334455688899999999999999999887666665543
No 54
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.52 E-value=6.2e-12 Score=127.92 Aligned_cols=306 Identities=11% Similarity=0.025 Sum_probs=151.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...++.++.|.+.||++|||++..+...-..... .......... .....+......+........+..
T Consensus 55 ~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~---~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 125 (420)
T PRK09528 55 NSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFG---PFFIYVFAPL------LQYNILLGAIVGGIYLGFGFLAGA 125 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH---HHHHHHHHHH------HHHHHHHHHHHHHHHhhhhhccch
Confidence 4567889999999999999999998765432211100 0001111100 000011111111111111111111
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
..+ .+|.+.. +++.....+..+....++..++|.++|.+.. .+|+..+++.+...++... . .....+
T Consensus 126 ~~~-~~~~~~~-----~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~-----~-~~~~~~ 192 (420)
T PRK09528 126 GAI-EAYIERV-----SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLV-----L-LFFAKP 192 (420)
T ss_pred hhh-hhHHHHH-----HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHH-----H-Hhcccc
Confidence 122 2342211 1123345567777888999999999999986 4888776554333332221 1 111112
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH----h
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----Q 240 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~----~ 240 (412)
| +.++++.. ++ ++++ ++ +. ..+.++..+|||.++..+............++...+.|.. +
T Consensus 193 ~-~~~~~~~~----~~-~~~~-~~-----~~----~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (420)
T PRK09528 193 D-APSTAKVA----NA-LGAN-AS-----AV----SLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFAT 256 (420)
T ss_pred c-ccchhhhc----cc-hhcc-cc-----cc----cHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 11100000 00 0000 00 00 1234556788887766332222211001222333555553 2
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
.+.+...+|.+.++..++...+.+..+++.+|+|.++...++.....+.... ..+.. + + ..... ...+...
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l--~~~~~-~--~-~~~~~---~~~l~g~ 327 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIG--SGFAT-G--P-LEVSI---LKLLHAF 327 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHH--HHhcc-c--H-HHHHH---HHHHHHH
Confidence 4777788999999999999999999999999999998876655432221111 12211 1 1 11111 1111122
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHH-HHHHHHHHH
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTT-EISVASLVE 357 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~-~~sl~~~~~ 357 (412)
+.-........+.++..|++.+++..+. .++......
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 2222344556778888899999987655 444444333
No 55
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.52 E-value=2.2e-11 Score=124.77 Aligned_cols=328 Identities=11% Similarity=0.003 Sum_probs=165.8
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++||+++..+.+...+. .. ........ .+ ..+.+++..++.|...........
T Consensus 70 ~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~----~~--~~~~~~~~-~~--~~~~l~~~~~l~g~~~g~~~~~~~ 140 (438)
T TIGR00712 70 ISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAV----ML--LMGFVPWA-TS--SIAIMFVLLFLNGWFQGMGWPPCG 140 (438)
T ss_pred HHHHHHHhhhccchhhhccCCceehHHHHHHHHHH----HH--HHhccccc-cc--hHHHHHHHHHHHHHHhhcchHHHH
Confidence 45667788899999999999999877775544332 11 11111000 01 111223333344444433332232
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKI 163 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~ 163 (412)
..+. | .++++ +..++++.......++..++|.+.+.++. ..+|+.++++.....++..... .. .+
T Consensus 141 ~~i~-~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~---~~---~~ 206 (438)
T TIGR00712 141 RTMV-H----WWSQS---ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFA---FA---MM 206 (438)
T ss_pred HHHH-H----hcCcc---cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH---HH---hc
Confidence 2222 3 45543 67889999888889999999888876555 4689998876544444432211 11 12
Q ss_pred cccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHh-HHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-c
Q 015174 164 SSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLG-WKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-R 241 (412)
Q Consensus 164 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~ 241 (412)
+|+..+++.++.+..+++.+++..++. +... +..+- ++..+|||.++.......++.....++....+.|+++ .
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 282 (438)
T TIGR00712 207 RDTPQSCGLPPIEEYRNDYPDDYNEKA---EQEL-TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVK 282 (438)
T ss_pred cCCHHhcCCCCchhccccccccccccc---cccc-chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHcc
Confidence 221100000000000000000000000 0000 11122 2346788888775433322211012223345677765 7
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCC-cCcch-HHHHHHHHHHhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSL-SQQNP-LLFFLCLIVLSR 319 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~-~~~~~-~~l~~~g~~~sr 319 (412)
|+|+...|+......+++++|+++.+++.+|++..|....+...... ....+..++..+. +.... ..++.. +
T Consensus 283 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----g 356 (438)
T TIGR00712 283 HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTL-VTIAVIVYWMNPAGNPLVDMICMIVI-----G 356 (438)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHH-HHHHHHHHHhcCCCchHHHHHHHHHH-----H
Confidence 99999999999999999999999999999999755432323221111 1111111121110 11111 111222 2
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH-HHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVAI 365 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~-ll~~~~~~ 365 (412)
.+.+.-.........+..|+++||+++|+.++..+..+ .+...+..
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G 403 (438)
T TIGR00712 357 FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 403 (438)
T ss_pred HHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHH
Confidence 22211111222345677899999999999998877643 33333333
No 56
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.51 E-value=7.1e-11 Score=118.78 Aligned_cols=320 Identities=11% Similarity=-0.034 Sum_probs=167.4
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+.+.+..++.|.+.||++||+++..+... ..... ........ . +.+++.=++.|..+-....+...
T Consensus 36 ~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~-----~~~~~--~~~~~~~~-----~-~~l~~~R~l~G~g~~~~~~~~~~ 102 (368)
T TIGR00903 36 PAAFLALTIPSGLLLDRAFKRWFLFGSLAT-----FAAAA--GRLLDPFN-----Y-EWLLACQLLAALGQPFLLNAFAP 102 (368)
T ss_pred HHHHHHHHHHHHHHHHHccchHHHHHHHHH-----HHHHH--HHHHHhcc-----H-HHHHHHHHHHHhHhHHHHHHHHH
Confidence 456678889999999999999886544221 11110 11111010 1 22333333444444322222222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
+ .|| ++++ +..++++.......++.+++|.+++.+....|||..|.+.....++... .....+||
T Consensus 103 -~-~~~----~~~~---~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~------~~~~~lp~ 167 (368)
T TIGR00903 103 -A-ASQ----IREE---RRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII------LVLAALPA 167 (368)
T ss_pred -H-HHH----cCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH------HHHHHcCC
Confidence 2 344 3332 7889999999999999999999999999999999988664444433321 11224454
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP 245 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~ 245 (412)
+ + +++++ . .+ . ++..+.|+..++||.++........+.....++.+-.+.|+++.|++.
T Consensus 168 ~-p-~~~~~----------~-~~------~--~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~ 226 (368)
T TIGR00903 168 L-P-FQAAE----------G-FG------F--KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLED 226 (368)
T ss_pred C-C-CCCCC----------C-cc------h--HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCh
Confidence 2 1 11110 0 00 0 111235788899998877443322221111233344667777788886
Q ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHh---chhhHHHH-HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 246 SIIGGFSGLCASMGVAATFLSAYLVRRL---GILKAGAA-GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 246 ~~~G~~~~~~avggllGt~l~~~l~~R~---g~~r~~~~-~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
. -|....+..+.+..|. +++.+|. |.++.... ... ...+.+......+. ..... . .+.++.++
T Consensus 227 ~-~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~---~~a~~~~~~~~~~~--~~~~~--~--~~~l~~~~ 293 (368)
T TIGR00903 227 I-AGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAAL---LIAAFFLALAFELN--RLALF--A--FIGIAGLL 293 (368)
T ss_pred H-HHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHH---HHHHHHHHHHHccc--cHHHH--H--HHHHHHHh
Confidence 5 5666666666555554 4444443 33332221 111 11111111111211 11111 1 11111222
Q ss_pred h-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH-HhccCCCchhHHHHHHHHHHHHHHHH
Q 015174 322 H-MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA-IIANDVSHFGFLATLSLLSVVGAAWM 390 (412)
Q Consensus 322 L-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~-~~~~~~~~f~~l~~~s~~~v~~~~~~ 390 (412)
. +.++ ....+.+|..|++.||++.|+.++..+..+.....+. .... +..+...+.+...+.++...
T Consensus 294 ~~~~~~-~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 294 MLPAYA-IIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred hhhhHH-HHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 1 1222 3557789999999999999999999998764444443 3332 33444444555555555544
No 57
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.50 E-value=2.8e-11 Score=123.17 Aligned_cols=309 Identities=13% Similarity=0.100 Sum_probs=163.1
Q ss_pred hHHHHHHhhhhhcchhccC----Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHH-HHHHHHHHHHHHH
Q 015174 5 SKLILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPW-FFVLVLAGAVERL 78 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~----~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~~~~l 78 (412)
..+...+..|+.|.+.||. +| |+.+..+.+.- +++... .+ ...+. +. .....+ ++..++.+....+
T Consensus 44 ~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~----~i~~~~-~~-~~~~~-~~-~~~~~~~~~~~~~~~~~~~~ 115 (437)
T TIGR00792 44 ARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPF----SIVLVL-LF-TTPDF-SA-TGKLVYAYITYILLGLFYSF 115 (437)
T ss_pred HHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHH----HHHHHH-HH-hCCCC-Cc-chHHHHHHHHHHHHHHHHHh
Confidence 4567788899999999984 44 44555553322 212221 11 11111 00 010112 2223345555555
Q ss_pred HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cChhHHHHHHHHHHHHHHH
Q 015174 79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-------YEPVTCLKFAAGLIMWSLP 151 (412)
Q Consensus 79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-------~~~~~~~~~~~~~~~~s~~ 151 (412)
.+++... +.+.+.++. ++.+++++..+....++.++++.+++.+... .+|+..+.+.+....+..
T Consensus 116 ~~~~~~a-----l~~~~~~~~--~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~- 187 (437)
T TIGR00792 116 VNIPYWS-----LVPAITLDP--RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL- 187 (437)
T ss_pred hcccHhh-----CcccccCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH-
Confidence 5544332 334465532 3688899888888888888877777777643 357766554333332222
Q ss_pred HHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccc
Q 015174 152 VMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPG 231 (412)
Q Consensus 152 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~ 231 (412)
......++|+. ++. +. + + + + + ....+.++..++||.++..+....++......+.
T Consensus 188 -----~~~~~~~~e~~----~~~-~~--~-~--~--~-~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (437)
T TIGR00792 188 -----IICFFGTKERY----SEI-PK--N-I--E--K-K-------LSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKN 242 (437)
T ss_pred -----HHHHcCCEecC----CCC-Cc--c-c--c--c-C-------CCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc
Confidence 11222333311 000 00 0 0 0 0 0 1135678888999988875544444321112222
Q ss_pred hHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 232 SLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 232 ~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
.....|.++ +| ++...+.+.....+++++++.+.+++.+|+|.+++..++.......... ....+. + .....
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~---~~~~~~-~--~~~~~ 315 (437)
T TIGR00792 243 GVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLI---FFFAGS-N--LPLIL 315 (437)
T ss_pred chhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH---HHHcch-h--HHHHH
Confidence 233444443 45 5677888888999999999999999999999988877665433222111 111111 0 11111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHHHHHH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
...++..+|.-........+.++.+| ++++|+++|+.++.+.....+...+
T Consensus 316 --~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i 373 (437)
T TIGR00792 316 --VLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFL 373 (437)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222332233444455555544 5678999999999888754444333
No 58
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.50 E-value=1.8e-11 Score=126.50 Aligned_cols=331 Identities=12% Similarity=0.027 Sum_probs=172.4
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+.+.+..++.|.+.||++|||++..+.+.-.+...+. ........ + ..+.+++.-++.|..+.....+..
T Consensus 73 ~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~----~~~~~~~~--~--~~~~l~~~r~l~G~~~~~~~~~~~ 144 (467)
T PRK09556 73 FSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGF----GASLGSGS--V--SLGLMIALWALSGFFQSTGGPCSY 144 (467)
T ss_pred HHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHH----HHHHhccc--c--hHHHHHHHHHHHHHHHhccchHHH
Confidence 356777889999999999999999877754332221111 11111111 1 112334444455655554443333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---ChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---EPVTCLKFAAGLIMWSLPVMIILTWFTN 161 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~---~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 161 (412)
++..|| ++++ +..++++.......++.+++|.+...+.... +|+..+.+.+...++ .........+
T Consensus 145 -~~i~~~----~~~~---~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~---~~i~~~~~~~ 213 (467)
T PRK09556 145 -STITRW----TPRR---KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALI---IGFIGLRYGS 213 (467)
T ss_pred -HHHHHH----cCcc---ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHH---HHHHHHHhCC
Confidence 344453 5543 5778888888888888888888887776643 477665443322222 1111111112
Q ss_pred hccccccccccccccccCC-CCCCCCCCchhhhHHhHHHHHHh-HHHHhcCCcchHHHHHH-HHHHHhhhccchHHHHHH
Q 015174 162 KISSGVLDRAKCSQSCCRT-SNEGPVPDADNIVDVGIEAIKLG-WKEYMQQPVLPASLAYV-LLCLNVVLTPGSLMTAFL 238 (412)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~a-~l~~t~v~~~~~~~~~y~ 238 (412)
+.||+. +..+.++...+. .++++..+.+ +... .+- .+..++||.++...... +.+.. ..+.....+.|+
T Consensus 214 ~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~p~yl 285 (467)
T PRK09556 214 DSPEEL-GWGKAEEIFGEPISEEDKETEST---DMTK---WQIFVEYVLKNPVIWLLCFANIFLYIV-RIGIDNWSPVYA 285 (467)
T ss_pred CChhhc-CCCChhhcccCccchhhhccccc---cCcH---HHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 222210 000000000000 0000000000 0001 122 23367888777644332 22322 123444577788
Q ss_pred H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 239 T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 239 ~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
+ ++|+|+.+.+.......++++.|..+.+++.+|+|.+|............... ...............++..|...
T Consensus 286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~G~~~ 363 (467)
T PRK09556 286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTL--GVYQHATSEYMYLASLFALGFLV 363 (467)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHH--HHHHhcCcHHHHHHHHHHHHHHH
Confidence 6 48999999999999999999999999999999999987765443322211111 11111110000112222222211
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccC
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIAND 369 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~ 369 (412)
.|. -........+..|++++|+++|+.++..+. .+.+...+.+...|
T Consensus 364 --~~~---~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 364 --FGP---QLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred --hhH---HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 111 111123455888999999999999999886 44555555555545
No 59
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.49 E-value=2.6e-11 Score=120.26 Aligned_cols=294 Identities=14% Similarity=0.016 Sum_probs=160.9
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+.+++.|.+.||++|||++..+.+...+. .. .. .. + + . +.+++..++.|...-.......
T Consensus 44 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~----~~--~~-~~--~--~--~-~~l~~~~~~~g~g~~~~~~~~~ 109 (355)
T TIGR00896 44 PVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAG----IL--IR-SA--P--G--T-ALLFAGTALIGVGIAIINVLLP 109 (355)
T ss_pred HHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHH----HH--HH-Hh--c--c--H-HHHHHHHHHHHHHHHHHhccch
Confidence 35667788999999999999999988775532211 11 11 11 1 1 1 2233333334443333332222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTWFTNK 162 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~~~~~ 162 (412)
++.+| ..++ +..++++.......++..++|.+++.+....+ |+..+.+.....++.. .. .
T Consensus 110 -~~~~~----~~~~----~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~------~~---~ 171 (355)
T TIGR00896 110 -SLIKR----DFPQ----RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLAL------LA---W 171 (355)
T ss_pred -HHHHH----hCcc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH------HH---H
Confidence 22334 3332 56788898888888899999999999987653 8877654332221111 11 1
Q ss_pred ccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhc
Q 015174 163 ISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQR 241 (412)
Q Consensus 163 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~ 241 (412)
+++.. ++++. + + + + . .+.++..+|+|.++.......++ .. ........+.|.+++
T Consensus 172 ~~~~~--~~~~~--~--~----~--~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~ 227 (355)
T TIGR00896 172 IPQVR--RRVAA--N--Q----T--T-T----------RLTPVRIWRSPLAWQVTVFFGLQSGL-YYSLIGWLPAILISH 227 (355)
T ss_pred hhhhc--cccCC--C--C----C--C-C----------CCCCchhhcCHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHc
Confidence 22210 00000 0 0 0 0 0 01233456777665533222222 11 122223456677788
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch-hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI-LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~-~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
|.++...|.+.+...+++++|+++.+++.+|++. ++...++......+... ..+... ........+.|+ ..
T Consensus 228 g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~l~g~---~~ 299 (355)
T TIGR00896 228 GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCG---LLFAPM--HGLWAWALVLGL---GQ 299 (355)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHH---HHHhhh--hHHHHHHHHHHH---hh
Confidence 9999999999999999999999999999999954 44545444433222211 112111 011111222222 22
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
|. .++.......++..+++++|+..+..+++.+....+...+
T Consensus 300 g~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~ 341 (355)
T TIGR00896 300 GG-AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLF 341 (355)
T ss_pred hh-HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 3455555555665567888999999888877654444433
No 60
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.47 E-value=6.9e-11 Score=120.72 Aligned_cols=157 Identities=11% Similarity=0.081 Sum_probs=93.5
Q ss_pred hHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC--------chhHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 015174 203 GWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP--------SIIGGFSGLCASMGVAATFLSAYLVRRLG 274 (412)
Q Consensus 203 g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~--------~~~G~~~~~~avggllGt~l~~~l~~R~g 274 (412)
+++..+|+|.+..-+...++..............|..+.|.++ +..|...+...++++.+.+..+++.+|+|
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4566889998876444433331101111223455666666554 67799999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHH-HH
Q 015174 275 ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS-VA 353 (412)
Q Consensus 275 ~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~s-l~ 353 (412)
.++...++.....+.... .....+. ......+....++.+++.-....+...+..+..|+++||+..|..+. .+
T Consensus 280 ~r~~l~~~~~~~~v~~~l--~~~~~~~---~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~ 354 (418)
T TIGR00889 280 IKKVMLLSLVAWALRFGF--FAYGDPE---YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCN 354 (418)
T ss_pred cHHHHHHHHHHHHHHHHH--HHHcCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 999988776543322211 1221111 00111111122222333223456667778889999999999999974 44
Q ss_pred HHHHHHHHHHH
Q 015174 354 SLVESVMLGVA 364 (412)
Q Consensus 354 ~~~~ll~~~~~ 364 (412)
.....+...+.
T Consensus 355 ~lg~~iGp~l~ 365 (418)
T TIGR00889 355 GFGSLLGYILS 365 (418)
T ss_pred hhHHHHHHHHH
Confidence 44443444443
No 61
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.45 E-value=2.3e-10 Score=114.90 Aligned_cols=293 Identities=13% Similarity=0.059 Sum_probs=157.7
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++|||++..+.+.-.+. +. ...... ..+.+++.-++.|............
T Consensus 51 ~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~----~~--~~~~~~-------~~~~l~~~~~l~G~~~~~~~~~~~~ 117 (381)
T PRK03633 51 FTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAG----CA--GLGLMV-------GFWSWLAWRFVAGIGCAMIWVVVES 117 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH----HH--HHHHhc-------cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566788999999999999999987775533221 11 111111 1123444444555544444433333
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
++.+ ..+++ +..+..+..+....++..+||.+++.+.....+... +.... ...... .....+.++
T Consensus 118 ~~~~-----~~~~~---~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~-~~~~~---~~~~~~---~~~~~~~~~ 182 (381)
T PRK03633 118 ALMC-----SGTSR---NRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLP-WVTGL---VLAAIL---PLLFTRILN 182 (381)
T ss_pred HHHH-----hCCHH---HHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHH-HHHHH---HHHHHH---HHHHhcccC
Confidence 3332 23322 567888888888888999999999998765333221 11111 111100 111112221
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLN 244 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~gls 244 (412)
+ ++++ + +. +.++..+|+|.++..+.....+ +. .....+..+.|.+++|.+
T Consensus 183 ~---~~~~-----------~-~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~~~~~g~s 233 (381)
T PRK03633 183 Q---QAEN-----------H-DS-------------TSIWPMLKLRQARLGVNGCIISGIV-LGSLYGLMPLYLNHQGMS 233 (381)
T ss_pred C---CCCC-----------C-CC-------------CCHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCC
Confidence 0 0000 0 00 0122245666666432222221 11 111223356788888999
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~ 324 (412)
+...|.+.+...++++.|....+++.+|+|.++....+.....+.... . .. . . ......+..|.. . +. .
T Consensus 234 ~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~---~-~~-~-~-~~~~~~~l~g~~--~-~~-~ 302 (381)
T PRK03633 234 DASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIA---M-LS-Q-A-AMAPALFILGAA--G-FT-L 302 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHH---H-hh-h-H-HHHHHHHHHHHH--H-Hh-H
Confidence 999999999999999999999999999999988877665443322111 1 11 1 0 011111112221 1 11 2
Q ss_pred hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
++. ......+.+|+++++..++..+...+.-..+.+.+....
T Consensus 303 ~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l 344 (381)
T PRK03633 303 YPV-AMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAML 344 (381)
T ss_pred HHH-HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 334455677888888888887766655444444444333
No 62
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.45 E-value=1.2e-10 Score=120.20 Aligned_cols=347 Identities=10% Similarity=-0.106 Sum_probs=183.6
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+.+++.+++.|.+.||++||+++..+.+.-.+. +....+.... ..+.+++.-++.|..+.....+...
T Consensus 86 ~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~----~~~~~~~~~~-------~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 86 FYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVI----SIVIPWAAGG-------GIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHH----HHHHHHHHHc-------CchHHHHHHHHHHHhcccchhhHHH
Confidence 4678888999999999999999988776533222 1100111111 1123444445566665544444333
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
|++..++++ +..++++.......++.+++|.++|.+... .+|+..|.+.....++.... ... ..+
T Consensus 155 -----~~~~~~~~~---~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~----~~~--~~~ 220 (465)
T TIGR00894 155 -----IIVKWAPPK---ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLL----WFV--FPA 220 (465)
T ss_pred -----HHHhcCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHH----HHH--Hhc
Confidence 333456643 789999999999999999999999999987 49999887654443332211 111 112
Q ss_pred ccccccccccccccC----CCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-
Q 015174 165 SGVLDRAKCSQSCCR----TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT- 239 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~- 239 (412)
| .++.+++.++.++ ++.++++.+ . +....|+..+++|.++........+......+..-++.|+.
T Consensus 221 ~-~p~~~~~~~~~~~~~i~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~ 290 (465)
T TIGR00894 221 D-DPSIHPCISKFEKKYINSSLQGQKGS-T--------RQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISW 290 (465)
T ss_pred C-CcccCCCCCHHHHHHHHhhcccccCC-C--------CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111110000000 000000000 0 00124777888887776443322221101222334566776
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH---HHHHHHHH-HHHHHH---HHhcCCCcCcchHHHHH
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA---GLIFQASL-LAMAVA---VYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~---~~~~~~~~-l~~~v~---~~~~g~~~~~~~~~l~~ 312 (412)
.+|+++...|+..++..++++.+..+.+++.+|++.++.... -.....+. ....+. ...... +....+..+.
T Consensus 291 ~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 369 (465)
T TIGR00894 291 VLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA-AFYLTIIILT 369 (465)
T ss_pred HhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC-chHHHHHHHH
Confidence 489999999999999999999999999999988765422110 00111111 111111 111111 1111111111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC---CchhHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV---SHFGFLATLSLLSVVGAAW 389 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~---~~f~~l~~~s~~~v~~~~~ 389 (412)
.+. ...+.. . ......-|+.. ++.+|.++|+.+..++..+.+...++...-+. ..|.....+..+....+..
T Consensus 370 l~~--~~~~~~-~-~~~~~~~~~~~-~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i 444 (465)
T TIGR00894 370 LAN--AVSSGP-L-AGVLINSLDLA-PRFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVI 444 (465)
T ss_pred HHH--HHhhhh-h-hhhhhchhhcC-hhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHH
Confidence 111 111211 1 11222334444 45899999999999999888888777655443 3354544444444444444
Q ss_pred HHHH
Q 015174 390 MFCH 393 (412)
Q Consensus 390 ~~~~ 393 (412)
.+..
T Consensus 445 ~~~~ 448 (465)
T TIGR00894 445 FYLI 448 (465)
T ss_pred Heee
Confidence 4443
No 63
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.44 E-value=3e-10 Score=116.21 Aligned_cols=295 Identities=12% Similarity=0.046 Sum_probs=146.1
Q ss_pred HHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhH-HHHHHHHHHHHHHHHHhhhhhhhhc
Q 015174 10 IVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH-PWFFVLVLAGAVERLTGVALGVAVE 88 (412)
Q Consensus 10 ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~g~~~~l~~~a~~~ai~ 88 (412)
.+.+.+.|.+.||++|||++..+.+.-.+...++ .+..+.+... .... .+++.=++.|..+-... ....++.
T Consensus 77 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~l~~~R~l~G~g~g~~~-~~~~~~i 149 (432)
T PRK10406 77 PIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI----ACLPGYETIG--TWAPALLLLARLFQGLSVGGEY-GTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH----hhcCCchhHH--HHHHHHHHHHHHHHHhhhhhhH-hhHHHHH
Confidence 3777889999999999999988876543331111 1111111000 0000 12222223343322222 2222333
Q ss_pred ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------hcChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 015174 89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS--------KYEPVTCLKFAAGLIMWSLPVMIILTWFT 160 (412)
Q Consensus 89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~--------~~~~~~~~~~~~~~~~~s~~~~~~~l~~~ 160 (412)
.|| ++++ +..+.++..........+++|.+++.+.. ..|||..|++.+....+.+ +..
T Consensus 150 ~e~----~p~~---~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-------~~~ 215 (432)
T PRK10406 150 SEV----AVEG---RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-------WLR 215 (432)
T ss_pred HHh----CCCC---cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-------HHH
Confidence 454 3332 33445665555556667777776655542 4799998865333222211 111
Q ss_pred hhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH-HHHHHH-HHHhhhccchHHHHHH
Q 015174 161 NKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLL-CLNVVLTPGSLMTAFL 238 (412)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~-~~~a~l-~~t~v~~~~~~~~~y~ 238 (412)
+++||. ++ ++++ + . .+ ...++..+|||.+... ...... +.. ...+..-.+.|+
T Consensus 216 ~~~~e~-~~-~~~~-----~----~-~~------------~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~lp~~l 270 (432)
T PRK10406 216 RQLDET-SQ-QETR-----A----L-KE------------AGSLKGLWRNRRAFIMVLGFTAAGSLC-FYTFTTYMQKYL 270 (432)
T ss_pred hcCCCC-ch-HHHh-----h----h-cc------------cccHHHHHhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 233431 11 0000 0 0 00 1134445556544331 111111 111 111222355666
Q ss_pred H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 239 T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 239 ~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
. ++|+++...+...+...+++..+..+.+++.+|+|++|...+....-.+...+. ......... ....+.+..+..
T Consensus 271 ~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 347 (432)
T PRK10406 271 VNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPI-LSALQNVSS--PYAAFGLVMCAL 347 (432)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH-HHHHHcCCc--HHHHHHHHHHHH
Confidence 5 579999999999999888888889999999999999887665433211111111 111111101 111111111111
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
...+. .........+|..|++.||+..|+.+++.+.
T Consensus 348 ~~~~~--~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~ 383 (432)
T PRK10406 348 LIVSF--YTSISGILKAEMFPAQVRALGVGLSYAVANA 383 (432)
T ss_pred HHHHH--HHHHHHHHHHHHCCCCccchhhhHHHHHHHH
Confidence 11122 1123445678999999999999999988665
No 64
>PRK15075 citrate-proton symporter; Provisional
Probab=99.43 E-value=1e-10 Score=119.81 Aligned_cols=294 Identities=11% Similarity=-0.030 Sum_probs=146.8
Q ss_pred hhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhH--HHHHHHHHHHHHHHHHhhhhhhhhcc
Q 015174 12 GGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLH--PWFFVLVLAGAVERLTGVALGVAVER 89 (412)
Q Consensus 12 ~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~g~~~~l~~~a~~~ai~R 89 (412)
.+.+.|.+.||++|||++..+.+.-... +. +..+...- +.-.... .+++.-++.|........+. .++..
T Consensus 72 g~~~~G~l~Dr~Grr~~l~~~~~~~~~~----~~--l~~~~~~~-~~~~~~~~~~l~~~R~l~G~~~g~~~~~~-~~~~~ 143 (434)
T PRK15075 72 GAIVLGAYIDRVGRRKGLIVTLSIMASG----TL--LIAFVPGY-ATIGLAAPLLVLLGRLLQGFSAGVELGGV-SVYLA 143 (434)
T ss_pred HHHHHHHHhhhhchHHHHHHHHHHHHHH----HH--HHHhCCcH-HHHHHHHHHHHHHHHHHhhccccccHHHH-HHHHH
Confidence 3567899999999999988876533222 21 11111110 0000000 11222223333332222222 22333
Q ss_pred cceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015174 90 DWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL--------SKYEPVTCLKFAAGLIMWSLPVMIILTWFTN 161 (412)
Q Consensus 90 Dwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~--------~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 161 (412)
| .++++ +..+.++......+++..+||.+|+.+. ...||+..|++... ..+.. .....
T Consensus 144 e----~~p~~---~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~----~~~~~---~~~~~ 209 (434)
T PRK15075 144 E----IATPG---RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL----IVPFI---FLIRR 209 (434)
T ss_pred h----hCCcc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH----HHHHH---HHHHH
Confidence 4 55543 6788888888888888889999888874 45789988765321 11111 11112
Q ss_pred hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCc-chHHHHHHHHHHHhhhccchHHHHHHHh
Q 015174 162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPV-LPASLAYVLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v-~~~~~~~a~l~~t~v~~~~~~~~~y~~~ 240 (412)
+.||. .+..++. .+++ . ++. ++...+++. +..++.................+.|+++
T Consensus 210 ~~~e~-~~~~~~~----------~~~~-~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 267 (434)
T PRK15075 210 SLEET-EEFLARK----------HRPS-M---REI-------FRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKT 267 (434)
T ss_pred hcCCC-HHHHHhh----------hccc-c---ccH-------HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23321 0000000 0000 0 011 122222221 1111111111100001122235667765
Q ss_pred -cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch-HHHHHHHHHHh
Q 015174 241 -RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP-LLFFLCLIVLS 318 (412)
Q Consensus 241 -~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~-~~l~~~g~~~s 318 (412)
+|+++.+.++.....+++++.++.+.+++.+|+|++|...++.........+ .........+.... ...+..++
T Consensus 268 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--- 343 (434)
T PRK15075 268 VLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYP-ALSWLVAAPSFARMLAVELWLSF--- 343 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH-HHHHHHcCCchHHHHHHHHHHHH---
Confidence 7999999999888999999999999999999999988776554332211111 11111111110001 11111222
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
..|. +........+|..|+++||+..|..+++...
T Consensus 344 ~~g~--~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~ 378 (434)
T PRK15075 344 LYGS--YNGAMVVALTEVMPAEVRTAGFSLAYSLATA 378 (434)
T ss_pred HHHH--HHhhHHHHHHHHCCCCccchheeHHHHHHHH
Confidence 1222 3333446678999999999999987665553
No 65
>PRK03699 putative transporter; Provisional
Probab=99.41 E-value=3.1e-10 Score=114.55 Aligned_cols=226 Identities=12% Similarity=0.007 Sum_probs=125.3
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++|||++..+.+...+. +. ...+... . +.+++..++.|............
T Consensus 52 ~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~----~~--l~~~~~~------~-~~~~~~~~l~G~~~g~~~~~~~~ 118 (394)
T PRK03699 52 NAGILISIFLNAWLMEIIPLKRQLIFGFALMILA----VA--GLMFSHS------L-ALFSIAMFVLGVVSGITMSIGTF 118 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH----HH--HHHHcch------H-HHHHHHHHHHHHhhHhhccchhH
Confidence 4556777889999999999999988776544322 21 1112111 1 22333334445444333222222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.+. | .++++ +..+.++........+..++|.+.+.++. ..+|+..+.+.+...++... +....+.|
T Consensus 119 ~i~-~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~-----~~~~~~~p 185 (394)
T PRK03699 119 LIT-H----VYEGK---QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFI-----LTLFSEFP 185 (394)
T ss_pred Hhh-h----hcccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH-----HHHhcCCc
Confidence 222 2 45443 45566666666667778899999998875 57999987654443333221 11112222
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCC
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGL 243 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gl 243 (412)
+ + +++. . + + ..++ .++.| +|.++.......++......+....+.|++ ++|+
T Consensus 186 ~--~--~~~~--~--~-~--~~~~-----------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~ 238 (394)
T PRK03699 186 A--L--GKHA--P--K-A--DKPV-----------AKEKW-----GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGM 238 (394)
T ss_pred c--c--cccC--c--c-c--cCcc-----------ccccC-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 1 1110 0 0 0 0000 00011 222222221112221101223344677886 4799
Q ss_pred CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 244 NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 244 s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
|+.+.|.+.+...+++.+|.++.+++.+|++++|.......
T Consensus 239 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~ 279 (394)
T PRK03699 239 SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAG 279 (394)
T ss_pred ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Confidence 99999999999999999999999999999999887765443
No 66
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.41 E-value=3.5e-10 Score=114.13 Aligned_cols=319 Identities=12% Similarity=0.028 Sum_probs=156.6
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++|||++..+........ +........... .. ......++..+..+..........
T Consensus 47 ~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~-~~~~~~~~~~~~~g~~~~~~~~~~- 120 (396)
T TIGR00882 47 ISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLF---APFFIYVFGPLL-QS-NILVGAIVGGLYLGFVFSAGAGAI- 120 (396)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHH---HHHHHHHhhhHH-HH-HHHHHHHHHHHHHHHHhccchhhH-
Confidence 456788899999999999999999887655432211 110111111100 00 000011111222232222222221
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.+|.+...++ + .+..+..+....++..+||.++|.+.. .+|+..|++.+....+... .. ....+
T Consensus 121 ----~~~~~~~~~~----~-~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~----~~--~~~~~ 184 (396)
T TIGR00882 121 ----EAYIEKVSRN----S-NFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILML----LL--MFAKP 184 (396)
T ss_pred ----HHHHHHhhhh----c-ccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHH----HH--HHhCC
Confidence 2332222221 1 134466777788999999999998876 5899887654433333221 11 11122
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-c--
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-R-- 241 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~-- 241 (412)
| .+++++.. +.++ ++ + ++ .. .+.++..+|||.++..+............++.....|.++ .
T Consensus 185 ~-~~~~~~~~--~~~~-~~-~-~~------~~----~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~ 248 (396)
T TIGR00882 185 K-APSSATVA--NALG-AN-A-SA------FS----LKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFAT 248 (396)
T ss_pred C-Cchhhhhh--cccc-cc-c-CC------CC----HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2 11111000 0000 00 0 00 00 1235667788876553322222211012233345667653 2
Q ss_pred -CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 242 -GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 242 -gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
+.+...+|...+.+.+....+....+++.+|+|.++...++.....+ .........+ ...+ . ...++..+
T Consensus 249 ~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l---~~~~~~~~~~----~~~~-~-~~~~l~g~ 319 (396)
T TIGR00882 249 PQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSV---RIIGSSFATT----ALEV-V-ILKMLHAF 319 (396)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHH---HHHHHHhcCC----hHHH-H-HHHHHHHH
Confidence 66777899999999999999999999999999999887766542221 1111111211 1111 1 11122222
Q ss_pred hhhhhhhhhhHHhhccCCcccchhHHHH-HHHHHHH-HHHHHHHHHHhccCC
Q 015174 321 GHMSYDIVGAQILQTGIPSSKANLIGTT-EISVASL-VESVMLGVAIIANDV 370 (412)
Q Consensus 321 GLw~~dl~~~~l~Q~~vp~~~~G~v~g~-~~sl~~~-~~ll~~~~~~~~~~~ 370 (412)
+.-........+.++..|++.+++..+. .++.... ..+...+.+.+....
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~ 371 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI 371 (396)
T ss_pred HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc
Confidence 2211222344556776788888886665 3444444 333334444444433
No 67
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.40 E-value=8.1e-10 Score=113.90 Aligned_cols=330 Identities=10% Similarity=0.009 Sum_probs=157.7
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+..++.+++.|.+.||++|||++..+.+.-.+...++..+........+.+. ...+.+++.=++.|........ ...
T Consensus 65 ~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~R~l~G~~~g~~~~-~~~ 142 (479)
T PRK10077 65 LIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNT-GYVPEFVIYRIIGGIGVGLASM-LSP 142 (479)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccch-hHHHHHHHHHHHHhhhHhHHhh-HHH
Confidence 46677889999999999999999888866543321111100000001111000 0111122222333333333222 233
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH--------hhcChhHHHHHHHHHHHHHHHHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL--------SKYEPVTCLKFAAGLIMWSLPVMIILT 157 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~--------~~~~~~~~~~~~~~~~~~s~~~~~~~l 157 (412)
++..| .++++ +..+..+..+....++.+++|.+++.+. ...+|+..+++.....++...
T Consensus 143 ~~i~e----~~~~~---~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~------ 209 (479)
T PRK10077 143 MYIAE----IAPAH---IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM------ 209 (479)
T ss_pred HHHHh----hCChh---hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH------
Confidence 34445 45543 4666777777777888888888877664 346899887654333322221
Q ss_pred HHhhhccccccccc--cccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHh-cC-CcchH---HHHHHHHH--HHhh
Q 015174 158 WFTNKISSGVLDRA--KCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYM-QQ-PVLPA---SLAYVLLC--LNVV 227 (412)
Q Consensus 158 ~~~~~~~~~~l~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~-~v~~~---~~~~a~l~--~t~v 227 (412)
....+||. ++.. +.++++.++. ++....+.. +...++..+.++.-. +. +.+.- .+..+... +...
T Consensus 210 -~~~~l~~s-~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (479)
T PRK10077 210 -LLYFVPET-PRYLMSRGKQEQAEGILRKIMGNTLA---TQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQF 284 (479)
T ss_pred -HHHcCCCC-cHHHHHcCCHHHHHHHHHHHcCChhH---HHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHH
Confidence 11234542 2110 0000000000 000000000 011111111111000 00 11110 11111111 1000
Q ss_pred hccchH---HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC
Q 015174 228 LTPGSL---MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ 304 (412)
Q Consensus 228 ~~~~~~---~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~ 304 (412)
.++... .+.+..+.|+++...++.....++..+.++.+.+++.+|+|+++...++......+............
T Consensus 285 ~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~--- 361 (479)
T PRK10077 285 VGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQA--- 361 (479)
T ss_pred hChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCc---
Confidence 111111 12233567888887777777788889999999999999999988877776644333222211111111
Q ss_pred cchHHHHHHHHHHhhhhhh-hhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 305 QNPLLFFLCLIVLSRLGHM-SYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 305 ~~~~~l~~~g~~~sr~GLw-~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
....... +++....+.. .+......+.+|..|+++||++.|...+.++....+.
T Consensus 362 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~ 416 (479)
T PRK10077 362 PGIVALL--SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFV 416 (479)
T ss_pred ccHHHHH--HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 1111111211 1234456778888899999999999999998866554
No 68
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.39 E-value=2.3e-10 Score=113.27 Aligned_cols=242 Identities=11% Similarity=0.009 Sum_probs=132.7
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+...+..++.|.+.||++||+++..+.+.-.+. .. ...+...+ . +.+++.-++.|........+
T Consensus 46 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~----~~--~~~~~~~~-----~-~~~~~~~~~~g~~~~~~~~~-- 111 (366)
T TIGR00886 46 PVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIP----CL--WAGLAVQS-----Y-SVLLLLRLFIGIAGGSFASC-- 111 (366)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HH--HHHHHhhh-----H-HHHHHHHHHHHHhchhhHhH--
Confidence 45677889999999999999999988876544332 11 11111101 1 12233333444433333222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------cChhHHHHHH-HHHHHHHHHHH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK----------YEPVTCLKFA-AGLIMWSLPVM 153 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~----------~~~~~~~~~~-~~~~~~s~~~~ 153 (412)
.++..| .++++ +..+.++.......++..++|.+++.+... .+|+..+++. .....+..
T Consensus 112 ~~~~~~----~~~~~---~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~--- 181 (366)
T TIGR00886 112 MPWISF----FFPKK---IQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPA--- 181 (366)
T ss_pred HHHHHH----hcCHh---hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHH---
Confidence 223334 34443 678888888877778888888887777653 3788776332 22222111
Q ss_pred HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015174 154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL 233 (412)
Q Consensus 154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~ 233 (412)
.+ ... ..+| +++++++. ++.+.+++ .. ...++..+.++..+++|.++.......++......+...
T Consensus 182 ~~-~~~--~~~~-~~~~~~~~-~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (366)
T TIGR00886 182 LL-IFF--VGAD-TPPGKPAT-GKLSFKGA---RW------SVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSI 247 (366)
T ss_pred HH-HHH--hccc-CCcccccc-hhcccccc---cc------cccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHH
Confidence 11 111 1122 11111110 00000000 00 000011124555677777665333222221111233444
Q ss_pred HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
.+.|++ .+|+++.+.|.+.....+.++.|..+.+++.+|+|.+|....+..
T Consensus 248 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 299 (366)
T TIGR00886 248 FAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFL 299 (366)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHH
Confidence 566776 479999999999999999999999999999999999887665544
No 69
>PRK09952 shikimate transporter; Provisional
Probab=99.38 E-value=1.6e-09 Score=111.32 Aligned_cols=128 Identities=16% Similarity=0.060 Sum_probs=74.4
Q ss_pred HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
.+.|.+ ++|+++..........++.+++++.+.+++.+|+|++|...++......+............ .....+
T Consensus 273 ~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-- 347 (438)
T PRK09952 273 ALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQS---IFWIVF-- 347 (438)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCC---hHHHHH--
Confidence 455765 58999886666666667778889999999999999998877665433222211111111111 011111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH-HHHHHHHHHHHh
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS-LVESVMLGVAII 366 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~-~~~ll~~~~~~~ 366 (412)
.+.....++..........+..|..|.+.|++..|....+.+ ..+.+.+.++..
T Consensus 348 ~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~ 402 (438)
T PRK09952 348 FSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAA 402 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 111121222222233455677888899999999999777755 344445544433
No 70
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.37 E-value=2.5e-09 Score=111.43 Aligned_cols=153 Identities=13% Similarity=-0.002 Sum_probs=83.2
Q ss_pred HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
.+.|++ ++|+++...++......++.+.|..+.+++.+|+|+++...++.....+....+......+. .... .
T Consensus 273 ~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~ 346 (490)
T PRK10642 273 MPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV----IGLI--F 346 (490)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC----HHHH--H
Confidence 556665 57999988888888888999999999999999999988776654321111111111111111 1111 1
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH-HHHhccC-CCchhHHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG-VAIIAND-VSHFGFLATLSLLSVVGAAWM 390 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~-~~~~~~~-~~~f~~l~~~s~~~v~~~~~~ 390 (412)
.+.+...++.-...-.......+..|++.||+..|....+....+.+... .+.+... .+.+.......+.++.+....
T Consensus 347 ~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~ 426 (490)
T PRK10642 347 AGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG 426 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 12111122211122334455567789999999988766665554444333 3333322 222333333344444444444
Q ss_pred HH
Q 015174 391 FC 392 (412)
Q Consensus 391 ~~ 392 (412)
+.
T Consensus 427 ~~ 428 (490)
T PRK10642 427 VT 428 (490)
T ss_pred HH
Confidence 43
No 71
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.36 E-value=2.1e-10 Score=119.07 Aligned_cols=325 Identities=14% Similarity=0.013 Sum_probs=175.8
Q ss_pred hHHHHHHhhhhhcchhccCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHH
Q 015174 5 SKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERL 78 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~-----R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l 78 (412)
..+||.+ -++.|.++||++ ||+.+..+.+... + .. .......+ + .. .+.. ..++.+.....
T Consensus 70 ~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~---~--~~--~~~l~~~~--~-~~--~~~~~~~~l~~~~~a~ 136 (468)
T TIGR00788 70 SSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGS---A--IL--YGLLPGKV--S-SA--KVAAAFIFLAALAKAL 136 (468)
T ss_pred HHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHH---H--HH--HHhccccc--c-hH--HHHHHHHHHHHHHHHH
Confidence 4678887 677999999997 7777666644321 1 11 11111111 1 11 2222 33344555555
Q ss_pred HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 158 (412)
.|++.+.-+. | ..+ ++++....+-+..-+...++.++||.++|.+....+|+..+.+.+....+...
T Consensus 137 ~dv~~da~~~-e----~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~------- 203 (468)
T TIGR00788 137 YDVLVDSLYS-E----RIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF------- 203 (468)
T ss_pred HHHhHHHHHh-h----hhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-------
Confidence 5655544332 2 233 22212222333444555678999999999999999999987665443333321
Q ss_pred Hhhhcccccc-ccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHH-HHHhhhccch-HHH
Q 015174 159 FTNKISSGVL-DRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLL-CLNVVLTPGS-LMT 235 (412)
Q Consensus 159 ~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l-~~t~v~~~~~-~~~ 235 (412)
.....+|++. .+++..++++.-+. .. ........++...+.+..+++|..+..+.+.++ |.. ..+... ...
T Consensus 204 ~~~~~~E~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~-~~~~~~~~f~ 277 (468)
T TIGR00788 204 VSNLSKERRAFVRPRIGTYLEMNMA----LL-TLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYAN-LPGASGSVFC 277 (468)
T ss_pred HHHhcccccccccccccccchhhhh----hh-hhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhh-cCCCCceeEE
Confidence 1123344210 00110000000000 00 000000112223344445788877776666666 533 122221 111
Q ss_pred HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH--HHh---cCCCcCcchHHH
Q 015174 236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA--VYW---SGSLSQQNPLLF 310 (412)
Q Consensus 236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~--~~~---~g~~~~~~~~~l 310 (412)
.+-+.+|.+|..+|++.+.+++++++|..++.++.+|++.+++..++...+..+...... .-+ .+.+. .. .
T Consensus 278 ~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~--~~--~ 353 (468)
T TIGR00788 278 ATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISD--EV--F 353 (468)
T ss_pred EEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCC--ee--e
Confidence 222458999999999999999999999999999999999999888776654433222110 011 11000 00 0
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
.....++..++.-..-.....++++.+|++.+|+..|+..+++++...+...++.
T Consensus 354 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 354 VLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred eeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 0011111111222244667888999999999999999999999986666665443
No 72
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=3.8e-10 Score=114.96 Aligned_cols=329 Identities=13% Similarity=0.029 Sum_probs=167.6
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+.+++.|.+.||++|||++..+.+.-.+. +. ...+... . +.+++.-++.|..+........
T Consensus 53 ~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~----~~--~~~~~~~------~-~~l~~~r~l~G~~~~~~~~~~~- 118 (412)
T TIGR02332 53 YAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIA----ST--ATMFATG------P-ESLYLLRILVGIAEAGFLPGIL- 118 (412)
T ss_pred HHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHH----HH--HHHHhcC------H-HHHHHHHHHHHHHHhhHHHHHH-
Confidence 3456777899999999999999987776533222 21 1112111 1 2233333445554444333322
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcChhHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLS------KYEPVTCLKFAAGLIMWSLPVMIILTWF 159 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~------~~~~~~~~~~~~~~~~~s~~~~~~~l~~ 159 (412)
++..| .++++ +..+.++.......++.+++|.++|.+.. ..||+.++.+.+...++.... .+
T Consensus 119 ~~~~~----~~~~~---~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~----~~- 186 (412)
T TIGR02332 119 LYLTF----WFPAY---FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM----TW- 186 (412)
T ss_pred HHHHH----HcCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH----Hh-
Confidence 23334 45543 67788999998888999999999999874 368999887644333332211 11
Q ss_pred hhhcccccccccc-----ccccc----cCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhc
Q 015174 160 TNKISSGVLDRAK-----CSQSC----CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLT 229 (412)
Q Consensus 160 ~~~~~~~~l~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~ 229 (412)
..++| +++..+ +.++. .+++.+.+.++.. ..+......+-|+..+ +|.++. .+.+.+.+.. ...
T Consensus 187 -~~~~~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~ 260 (412)
T TIGR02332 187 -FWLDD-SPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGA--FAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNT-LSA 260 (412)
T ss_pred -hccCC-CcccCCCCCHHHHHHHHHHHHhccccccccccc--cccccccHHHHHHHhc-ChHHHHHHHHHHHHHHH-HHH
Confidence 12233 111000 00000 0000000000000 0000001112344444 344433 2222222211 122
Q ss_pred cchHHHHHHHh--cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHH-HHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015174 230 PGSLMTAFLTQ--RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGA-AGLIFQASLLAMAVAVYWSGSLSQQN 306 (412)
Q Consensus 230 ~~~~~~~y~~~--~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~ 306 (412)
+..-.+.|+++ .|.|+...|.+.+...++++.|.++.+++.+|+++++... .......+.. ++ ....+. .
T Consensus 261 ~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~--~~-~~~~~~----~ 333 (412)
T TIGR02332 261 INIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW--LL-ASATDH----N 333 (412)
T ss_pred HHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH--HH-HHhcCC----H
Confidence 33345567765 3788889999999999999999999999999999766432 2222221111 11 111111 1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC-CCchhH
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND-VSHFGF 375 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~-~~~f~~ 375 (412)
...++ ++.+...|...--.......++..|+++||++.|+.++..+....+...+.....+ ...+..
T Consensus 334 ~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~ 401 (412)
T TIGR02332 334 LIQLL--GIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNS 401 (412)
T ss_pred HHHHH--HHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCch
Confidence 11111 11111112211111122333566799999999999999999866666555444333 334443
No 73
>TIGR00898 2A0119 cation transport protein.
Probab=99.35 E-value=2.2e-09 Score=111.71 Aligned_cols=344 Identities=13% Similarity=0.029 Sum_probs=171.8
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+..++.+++.|.+.||++||+++..+.+...+. .. ...+... . +.+++.-++.|......... .
T Consensus 136 ~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~----~~--~~~~~~~------~-~~~~~~r~l~G~~~~~~~~~-~ 201 (505)
T TIGR00898 136 FFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVS----GV--LTAFSPN------Y-TVFLVFRLLVGMGIGGIWVQ-A 201 (505)
T ss_pred HHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHH----HH--HHHHccc------H-HHHHHHHHHHHhhccchHHH-H
Confidence 34667888899999999999999988876654332 11 1111111 1 22333333444443332222 2
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
.++..| .++++ +..++++.......++.+++|.+++.+.. |+..+++.+...++... .. ..+|
T Consensus 202 ~~~~~e----~~~~~---~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~----~~---~~~~ 264 (505)
T TIGR00898 202 VVLNTE----FLPKK---QRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFL----LS---WFVP 264 (505)
T ss_pred HHHhhe----ecChh---hhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHH----HH---HhcC
Confidence 222334 56653 56778888888888889999999887764 88776554333222221 11 2334
Q ss_pred cccc---ccccccc--cc---cCCCCCCCCCC-chh-hhHHhHHHH--HHhHHHHhcCCcchHHHH-HHHHHHHhhhccc
Q 015174 165 SGVL---DRAKCSQ--SC---CRTSNEGPVPD-ADN-IVDVGIEAI--KLGWKEYMQQPVLPASLA-YVLLCLNVVLTPG 231 (412)
Q Consensus 165 ~~~l---~~~~~~~--~~---~~~~~~~~~~~-~~~-~~~~~~~~~--~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~ 231 (412)
|... .+.+..+ +. ..+.++...++ ..+ ......++- ...++..+++|.++.... ....++. ....-
T Consensus 265 esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~ 343 (505)
T TIGR00898 265 ESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFT-TAFSY 343 (505)
T ss_pred CChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHH-HHHHH
Confidence 4210 0000000 00 00000000000 000 000000000 136778888988877443 2333332 11000
Q ss_pred hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
.....+....+.+.. ......++..+.|.++.+++.+|+|+++...++.....++.... .+.+.. .......+.
T Consensus 344 ~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~--~~~~~~-~~~~~~~~~ 417 (505)
T TIGR00898 344 YGLVLDLGNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLL--LFVPVD-LYFLRTALA 417 (505)
T ss_pred HHHhccccccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HHcCCC-chHHHHHHH
Confidence 011122233455433 33345567778899999999999999888776655433322211 222211 001111111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMF 391 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~ 391 (412)
.+...+.-........+.+|..|++.||+..|+.++......++.+.+.. ..+........+.+...+.++...+
T Consensus 418 ----~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (505)
T TIGR00898 418 ----VLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKWLFLPLVLFGGLALLAGILTL 492 (505)
T ss_pred ----HHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 11122221122344567788899999999999999999887777766655 3333333333444444444444443
No 74
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.33 E-value=1.7e-08 Score=104.85 Aligned_cols=198 Identities=14% Similarity=0.091 Sum_probs=117.3
Q ss_pred HHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 015174 194 DVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 272 (412)
Q Consensus 194 ~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R 272 (412)
...++++.+-+|...|+|...-=+..-++|.--+.........|.+ ++|+++.++..+.-...+.++.|+++++++.+|
T Consensus 264 ~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r 343 (477)
T PF11700_consen 264 RFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR 343 (477)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777777764443222222331101222335777887 699999999999999999999999999999999
Q ss_pred hchh--hHHHHHHHHHHHHHHHHHHHHhcCCC--cCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHH
Q 015174 273 LGIL--KAGAAGLIFQASLLAMAVAVYWSGSL--SQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTT 348 (412)
Q Consensus 273 ~g~~--r~~~~~~~~~~~~l~~~v~~~~~g~~--~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~ 348 (412)
+|.+ |+....+.+..++.+.....+.+... ......+++ ..+.+.-.|- .--...+++.+.+|+++.+...|.
T Consensus 344 ~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~-a~~~G~~~G~--~qs~sRs~~~~LiP~g~e~efFgl 420 (477)
T PF11700_consen 344 FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVL-AVLIGLFMGG--IQSASRSLFSRLIPPGREAEFFGL 420 (477)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHH-HHHHHHHhhh--HHHHHHHHHHHhCCCchhhHHHHH
Confidence 9998 78776665432222221111111110 101112221 1121112232 445677889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccC--CCchhHHHHHHHHHHHHHHHHHHHH
Q 015174 349 EISVASLVESVMLGVAIIAND--VSHFGFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 349 ~~sl~~~~~ll~~~~~~~~~~--~~~f~~l~~~s~~~v~~~~~~~~~~ 394 (412)
+.........+.+.+.....+ .+.+.-...+.+.++.....++...
T Consensus 421 y~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 421 YAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 999999877777666444322 2233333333333344444444343
No 75
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.24 E-value=5.1e-09 Score=108.65 Aligned_cols=312 Identities=9% Similarity=0.001 Sum_probs=156.2
Q ss_pred HHHhhhhhcchhcc----CCc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhh
Q 015174 9 LIVGGPLVGKLMDH----SPR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVA 82 (412)
Q Consensus 9 ~ll~g~~~G~~vDr----~~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a 82 (412)
-.+..|.+|.+.|| ++| |+-+..+.+.. +++.. +++ .....+. .....++.+ .++.+..-.+.++.
T Consensus 55 dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~----~i~~~-llf--~~p~~~~-~~~~~~~~~~~~l~~~~~t~~~ip 126 (473)
T PRK10429 55 DAINDPIMGWIVNNTRSRWGKFKPWILIGTLAN----SVVLF-LLF--SAHLFEG-TAQYVFVCVTYILWGMTYTIMDIP 126 (473)
T ss_pred HHHhhchheeehhcCCCCCCCcchhHhhhhHHH----HHHHH-HHH--cCCCCCc-cHHHHHHHHHHHHHHHHHHHHcch
Confidence 34567889999995 466 55566554433 22221 122 2111011 111122222 23444555555555
Q ss_pred hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCh---hHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEP---VTCLKFAAGLIMWSLPVMIILTWF 159 (412)
Q Consensus 83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~---~~~~~~~~~~~~~s~~~~~~~l~~ 159 (412)
... +.+++.++. +|.+++++.-+....++.++.+.++..++...|. +..+...+...++...+.. +..
T Consensus 127 ~~a-----l~~~lt~~~--~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~--~~~ 197 (473)
T PRK10429 127 FWS-----LVPTLTLDK--REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVST--IIT 197 (473)
T ss_pred HHh-----hhHHhCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH--HHH
Confidence 443 455577643 3788999986655666666666666655443331 1111111111111111111 122
Q ss_pred hhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH
Q 015174 160 TNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT 239 (412)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~ 239 (412)
....+|+. + +++. ++ ++++ ....++.++..++||.++-.+...+++........+....|.+
T Consensus 198 ~~~~~e~~-~-~~~~----~~----~~~~--------~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~ 259 (473)
T PRK10429 198 LRNVHEVY-S-SDNQ----VS----AEGS--------HLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFT 259 (473)
T ss_pred HcCceecC-C-cccc----cc----cccc--------CCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEE
Confidence 22333311 0 0000 00 0000 0124567888889998887655554442111222233333445
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
+..-++...+.+.+..+++++++..+.+++.+|+|.+++..++.....+..+........++ . .. ..+....++..
T Consensus 260 y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~-~~~~i~~~l~g 335 (473)
T PRK10429 260 YVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP-H--NA-LLIVIAGILLN 335 (473)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc-h--hH-HHHHHHHHHHH
Confidence 44446777888889888999999999999999999999887665432222211111111111 1 11 11111222233
Q ss_pred hhhhhhhhhhhHHhhccCCc-------ccchhHHHHHHHHHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGIPS-------SKANLIGTTEISVASLVESV 359 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~-------~~~G~v~g~~~sl~~~~~ll 359 (412)
+|.-........++++.+|+ +..|...|.+...+.....+
T Consensus 336 ~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al 382 (473)
T PRK10429 336 IGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAF 382 (473)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHH
Confidence 34434556667778887763 34455888888887764433
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.21 E-value=4.1e-08 Score=100.15 Aligned_cols=234 Identities=9% Similarity=0.023 Sum_probs=132.6
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..+.+++.++++|.+.||++|||++....+...+...+ ........ ..+.+++..++.|....+.+++.
T Consensus 46 ~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l----~~~~~~~~------~~~~~l~~~~l~G~g~g~~~~~~ 115 (410)
T TIGR00885 46 AFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL----FWPAAEIM------NYTLFLVGLFILTAGLGFLETAA 115 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH----HHHHHhhc------cHHHHHHHHHHHHhhHHHHHhhh
Confidence 456778899999999999999999988887654333111 11111111 11233444455566555555544
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------------------cChhH
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK--------------------------YEPVT 137 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~--------------------------~~~~~ 137 (412)
...+. .+.+++ +..+..+..+....++..+||.+++.++.. .+|+.
T Consensus 116 ~~~~~-----~~~~~~---~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~ 187 (410)
T TIGR00885 116 NPYIL-----VMGPES---TATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQT 187 (410)
T ss_pred hHHHH-----HHCCHh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHH
Confidence 33222 244433 567778888899999999999999998743 24777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHH
Q 015174 138 CLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASL 217 (412)
Q Consensus 138 ~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 217 (412)
.+...+....+... .....+.|+. ++++ + + + + +..+.++..+|||.++...
T Consensus 188 ~fl~~a~~~~~~~~-----~~~~~~~p~~----~~~~--~--~----~--~----------~~~~~~~~~~~~~~~~~~~ 238 (410)
T TIGR00885 188 PYMIIGAVVLAVAL-----LIMLTKMPAL----NHSD--A--K----Q--I----------SFSASLSRLARIRHYREGV 238 (410)
T ss_pred HHHHHHHHHHHHHH-----HHHHhcCCCC----Cccc--c--c----c--c----------cchhhHHHHHhChhHHHHH
Confidence 77554433222211 1112233321 0000 0 0 0 0 0112445567888888766
Q ss_pred HHHHHHHHhhhccchHHHHHHHhc--CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 218 AYVLLCLNVVLTPGSLMTAFLTQR--GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 218 ~~a~l~~t~v~~~~~~~~~y~~~~--gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
...++|...-....+..+.|.++. +.++..-+...+..-.+...|-++.+++.+|++.+|...+...
T Consensus 239 l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~ 307 (410)
T TIGR00885 239 IAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAI 307 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 666666431112233455666544 3333333334444445667888888999999999888765544
No 77
>PRK09848 glucuronide transporter; Provisional
Probab=99.21 E-value=3.7e-08 Score=101.19 Aligned_cols=153 Identities=11% Similarity=-0.005 Sum_probs=91.2
Q ss_pred HHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHH
Q 015174 201 KLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG 279 (412)
Q Consensus 201 ~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~ 279 (412)
.+.++..++||.++.......++......+....+.|.++ +|.++..-++....+.++.++++.+.+++.+|+|.++..
T Consensus 218 ~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~ 297 (448)
T PRK09848 218 KISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF 297 (448)
T ss_pred HHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 4568889999999885554444422112233334445554 787776545555555788899999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc-------cchhHHHHHHHH
Q 015174 280 AAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS-------KANLIGTTEISV 352 (412)
Q Consensus 280 ~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~-------~~G~v~g~~~sl 352 (412)
.++.....+.... ..+.+.. ....+.....+..+|..........+..+.+|++ +.|..+|+++..
T Consensus 298 ~~g~~~~~i~~~~---~~~~~~~----~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 298 LIGALLGTCGYLL---FFWVSVW----SLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred HHHHHHHHHHHHH---HHHcCch----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 8776543322211 2122111 1111112233334455445555555666666544 469999999988
Q ss_pred HHHHHHHH
Q 015174 353 ASLVESVM 360 (412)
Q Consensus 353 ~~~~~ll~ 360 (412)
+.....+.
T Consensus 371 ~klg~aig 378 (448)
T PRK09848 371 RKCGQAIG 378 (448)
T ss_pred HHHHHHHH
Confidence 87754443
No 78
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.20 E-value=2.6e-08 Score=103.49 Aligned_cols=226 Identities=11% Similarity=-0.042 Sum_probs=113.6
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA 86 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a 86 (412)
+...+..++.|.+.||++||+++..+.+.-.+. . +...+... . +.+++.-++.|..+.... ... .
T Consensus 82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~----~--~~~~~~~s------~-~~l~~~r~l~G~~~~~~~-~~~-~ 146 (476)
T PLN00028 82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPA----V--FCMSLVSS------A-TGFIAVRFFIGFSLATFV-SCQ-Y 146 (476)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH----H--HHHHHhcC------H-HHHHHHHHHHHHHHHhhH-HHH-H
Confidence 344555688999999999999877664432221 1 11112211 1 123333334444332221 111 1
Q ss_pred hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH----Hhh-----cChhHHHHHHHHHHHHHHHHHHHHH
Q 015174 87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL----LSK-----YEPVTCLKFAAGLIMWSLPVMIILT 157 (412)
Q Consensus 87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L----~~~-----~~~~~~~~~~~~~~~~s~~~~~~~l 157 (412)
...| .++++ +..++++.......++..++|.+.+.+ ... .||+..+++.+...++.... .
T Consensus 147 ~i~~----~~~~~---~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~----~ 215 (476)
T PLN00028 147 WMST----MFNGK---IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGIL----V 215 (476)
T ss_pred HHHH----hcChh---heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHH----H
Confidence 2224 44443 566677766655455555554444433 322 48999887655444332211 1
Q ss_pred HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHH-HHHHHHHHHhhhccchHHHH
Q 015174 158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPAS-LAYVLLCLNVVLTPGSLMTA 236 (412)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~-~~~a~l~~t~v~~~~~~~~~ 236 (412)
.. .+++.++. +.. +..++ .+.+ + . ...+.++..++++.++.. +.+...+.. ...+.+..+.
T Consensus 216 ~~---~~~~~p~~-~~~-~~~~~----~~~~-~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~ 277 (476)
T PLN00028 216 LT---LGQDLPDG-NYR-ELKKS----GTMP-K----D---SFSKVLRYGVTNYRTWILALTYGYSFGV-ELTMDNIIAE 277 (476)
T ss_pred HH---HcCcCCCC-chh-hHHhc----Cccc-c----c---cHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHhHHHH
Confidence 11 12111110 000 00000 0000 0 0 011235556677765542 222222211 1223334556
Q ss_pred HHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015174 237 FLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 276 (412)
Q Consensus 237 y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~ 276 (412)
|+. +.|+++...+.+.+...++++.|.++.+++..|++++
T Consensus 278 ~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r 318 (476)
T PLN00028 278 YFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARR 318 (476)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHh
Confidence 765 4799999999999999999999999999999988764
No 79
>PRK09669 putative symporter YagG; Provisional
Probab=99.18 E-value=3.3e-08 Score=101.57 Aligned_cols=302 Identities=11% Similarity=0.040 Sum_probs=148.2
Q ss_pred HHHHHhhhhhcchhccC----Cc-HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHHHh
Q 015174 7 LILIVGGPLVGKLMDHS----PR-IPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTG 80 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~----~R-~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l~~ 80 (412)
+--.+..|..|.+.||. +| |+.+....+.- +++..+ .+..... +. .....++. ..++.+......+
T Consensus 56 i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~----~i~~~l-~f~~p~~--~~-~~~~~~~~~~~~l~~~~~t~~~ 127 (444)
T PRK09669 56 VLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPF----GVVCLL-TFYTPDF--GA-TGKIIYACVTYILLSLVYTAIN 127 (444)
T ss_pred HHHHcccceeeEeeecCCCCCCCcchhHHHHHHHH----HHHHHH-HHhCCCC--Cc-chHHHHHHHHHHHHHHHHHhhc
Confidence 34456789999999994 34 45565553322 222211 1211111 00 01112222 2234444444555
Q ss_pred hhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHH
Q 015174 81 VALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVM 153 (412)
Q Consensus 81 ~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~ 153 (412)
+.... +.+++.++. ++.+++++.-+....++..++|.++..+...++ |+..+.+.+....+..
T Consensus 128 ip~~a-----l~~~~t~~~--~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~--- 197 (444)
T PRK09669 128 VPYCA-----MPGAITNDP--RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLF--- 197 (444)
T ss_pred chHHH-----hHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH---
Confidence 44432 444466542 367788888887778888888877766665443 3323222111111111
Q ss_pred HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015174 154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL 233 (412)
Q Consensus 154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~ 233 (412)
.......+|+ .++. + + + + ....+.++..+|||.++..+...+++........+.
T Consensus 198 ---~~~~~~~~e~----~~~~--~--~----~--~---------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~ 251 (444)
T PRK09669 198 ---FCCFFMTKER----YTPE--V--D----N--S---------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGA 251 (444)
T ss_pred ---HHHhCCeEEe----cCCC--C--c----C--C---------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhh
Confidence 1122222221 0010 0 0 0 0 113467888899999888655544442111112233
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
...|.++.--++...+.+...+.+.+++++.+.+++.+|+|.++...++......+. ...+..++ .. . ..+..
T Consensus 252 ~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~---~~~~~~~~-~~-~--~~~~~ 324 (444)
T PRK09669 252 TLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILS---ALIFFIPP-SN-V--WLIFA 324 (444)
T ss_pred hheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHH---HHHHHhCc-ch-H--HHHHH
Confidence 333444422234455667777888999999999999999999888776654322211 11111111 11 1 11111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESV 359 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll 359 (412)
..++.++|..........+.-+.+| +++.|...|.+...+.....+
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~al 377 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAI 377 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHH
Confidence 2223333443333334444434443 345677788887777764333
No 80
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.16 E-value=1e-07 Score=103.74 Aligned_cols=136 Identities=11% Similarity=-0.048 Sum_probs=79.2
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhh
Q 015174 249 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIV 328 (412)
Q Consensus 249 G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~ 328 (412)
.+...+++++++.|.++.+++..|+|+++++..+.....++..+. .+.+.. . ......++.+.+. +. .+ ..
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~--~~~~s~-~-~ll~~~~l~g~~~---~~-~~-~~ 668 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFL--SFGNSE-S-AMIALLCLFGGLS---IA-AW-NA 668 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH--HHHccH-H-HHHHHHHHHHHHH---HH-HH-HH
Confidence 445677889999999999999999999998876655433332221 222211 0 0111111112111 11 22 34
Q ss_pred hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015174 329 GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCH 393 (412)
Q Consensus 329 ~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~ 393 (412)
...+.-|..|.++||+..|+.+++..+..++.+.++..+-+.......++.++..+.++.+.+..
T Consensus 669 ~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 669 LDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGITKAAPILFASAALACGGLLALKL 733 (742)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 55677888999999999999999999988777776543322222222223333334444444433
No 81
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.15 E-value=1.8e-08 Score=102.96 Aligned_cols=305 Identities=13% Similarity=0.073 Sum_probs=165.2
Q ss_pred HHHHhhhhhcchhc----cCCcHHH-HHHHHHHHHHHHHHHHHHHHHHhcccc-ccccchhHHH-HHHHHHHHHHHHHHh
Q 015174 8 ILIVGGPLVGKLMD----HSPRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIP-TSSSMLLHPW-FFVLVLAGAVERLTG 80 (412)
Q Consensus 8 p~ll~g~~~G~~vD----r~~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~-~~~~~~~~~l-~~~~~~~g~~~~l~~ 80 (412)
--.+.-|.+|.++| |++|||- +...-+.- +++.. ..+...| ..+......| ++..+++...-++.+
T Consensus 49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~----~~~~~---llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~ 121 (428)
T PF13347_consen 49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILL----ALSFF---LLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQ 121 (428)
T ss_pred hhhhcCCcEEEEEeeecccccccceEeehhhHHH----HHHHH---HhhccccchhhhhhHHHHHHHHHHHHHHhhhhcc
Confidence 34566789999999 7766664 54443321 22221 1121111 1110011112 222334444444444
Q ss_pred hhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHH
Q 015174 81 VALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVM 153 (412)
Q Consensus 81 ~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~ 153 (412)
++.. .+.|.+++++ +|.++.++.-+....++.++...+.+.+...++ |+....+.+....+..
T Consensus 122 i~~~-----al~~~lt~~~--~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~--- 191 (428)
T PF13347_consen 122 IPYN-----ALIPELTPDP--DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF--- 191 (428)
T ss_pred Cchh-----hcCccccccH--hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh---
Confidence 4432 3666688753 378889988888888888888888888886655 3333222222222222
Q ss_pred HHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH
Q 015174 154 IILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL 233 (412)
Q Consensus 154 ~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~ 233 (412)
......++|+ +++. +++ ......++.++..+|||-++..+....+.........+.
T Consensus 192 ---~i~~~~~ke~----~~~~--~~~---------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~ 247 (428)
T PF13347_consen 192 ---LITFFFVKER----SVEV--TEQ---------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTF 247 (428)
T ss_pred ---hhhhheeeec----cccc--ccc---------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhH
Confidence 1222233330 0000 000 001124567888999999988666555542211223334
Q ss_pred HHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHH
Q 015174 234 MTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFF 311 (412)
Q Consensus 234 ~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~ 311 (412)
...|.++ .|.+ ...+.+.....++++++..+.+++.||+|.+|+...+......+.+.. .+.. ++ ....+
T Consensus 248 ~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~-- 319 (428)
T PF13347_consen 248 LPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL--FFLGPGS---PWLVL-- 319 (428)
T ss_pred HHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH--HHHHhhh---HHHHH--
Confidence 5556665 6666 678999999999999999999999999999999887776544333322 1111 12 11111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCC-------cccchhHHHHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIP-------SSKANLIGTTEISVASLVESVMLG 362 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp-------~~~~G~v~g~~~sl~~~~~ll~~~ 362 (412)
...++.++|.-.+......+.-+.++ +++.|..+|+++..+.....+...
T Consensus 320 -i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 320 -ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred -HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 12222233332233444444444444 456789999988888874444333
No 82
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=2.4e-08 Score=99.87 Aligned_cols=344 Identities=16% Similarity=0.153 Sum_probs=199.8
Q ss_pred HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015174 11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD 90 (412)
Q Consensus 11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD 90 (412)
+-=...|.+.||.+-|+.|-..++..++. .+ + ++-.+ | + +..++...+-|-.+...-.+..+.+..
T Consensus 79 ~sKf~~G~~sDr~npr~fm~~gLilsai~----ni--l--~Gfs~---s-~-~~~~~l~~lng~fQg~Gwpp~~~~i~~- 144 (448)
T COG2271 79 VSKFVMGVLSDRSNPRYFMAFGLILSAIV----NI--L--FGFSP---S-L-FLFAVLWVLNGWFQGMGWPPCARTITH- 144 (448)
T ss_pred HHHHHhhhhcccCCCceeehHHHHHHHHH----HH--H--Hhhhh---H-H-HHHHHHHHHHHHHhcCCCcHHHHHHHH-
Confidence 33356899999999999888776533221 21 2 22211 0 1 122333345555555555555565554
Q ss_pred ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-
Q 015174 91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLF--GILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGV- 167 (412)
Q Consensus 91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg--G~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~- 167 (412)
|-+. ++|+ +.-|.=.....+.-.+.|++. |.+....+|+.+|.+... ++..+.++.+...+..|+..
T Consensus 145 Wfsr---~eRG----~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgi---iaiival~~~~~~rd~Pqs~G 214 (448)
T COG2271 145 WFSR---KERG----TWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGI---IAIIVALILLFLLRDRPQSEG 214 (448)
T ss_pred HcCc---cccC----ceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHH---HHHHHHHHHHHHhCCCccccC
Confidence 4322 2222 222333334556666667777 888888899999987544 33333443444445555422
Q ss_pred ccc-cccc-ccccC-CCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHh-cC
Q 015174 168 LDR-AKCS-QSCCR-TSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQ-RG 242 (412)
Q Consensus 168 l~~-~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~-~g 242 (412)
+++ ++-. ++.++ ++|++. + .......=++++++||..+- +++..++|+. =.+.+.=.++|++| +|
T Consensus 215 LP~ie~~~~d~~e~~~~~~~~--~-------~ls~~~i~~~YVL~Nk~iW~la~a~vfvYiv-R~gi~dW~p~YL~e~k~ 284 (448)
T COG2271 215 LPPIEEYRGDPLEIYEEEKEN--E-------GLTAWQIFVKYVLKNKLIWLLALANVFVYVV-RYGINDWGPLYLSEVKG 284 (448)
T ss_pred CCCHHHhhcCchhhhhhhccC--C-------CccHHHHHHHHHHcChHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHhcC
Confidence 111 1111 11111 111000 0 01111224778899998777 7778888842 23444457889875 89
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc--CcchHHHHHHHHHHhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS--QQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~--~~~~~~l~~~g~~~sr~ 320 (412)
+|...-+...+.-=++|+.|+++.+++..|+-..|-+..++.+ .+....++..+|..+.. .....+++..
T Consensus 285 ~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~-~~~i~~~~~~~w~~~~~~~~l~~~~l~~i------- 356 (448)
T COG2271 285 FSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIF-MLLITASLVLYWLAPNGSYLLDAILLFII------- 356 (448)
T ss_pred CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHH-HHHHHHHHHHHHcCCCccHHHHHHHHHHH-------
Confidence 9999999999999999999999999999998766555545443 23344455566654421 0111233333
Q ss_pred hhhhhh--hhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCC-CchhHHHHHHHHHHHHHHHHHHHHhc
Q 015174 321 GHMSYD--IVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDV-SHFGFLATLSLLSVVGAAWMFCHWLL 396 (412)
Q Consensus 321 GLw~~d--l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~-~~f~~l~~~s~~~v~~~~~~~~~~~~ 396 (412)
|.-+|. .-....--|.+|.+-.|+++|..+...++ -+.+.........|. .=.+.-++++.+++++...+...|-+
T Consensus 357 Gf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 357 GFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred HHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 322332 23334445778999999999999999998 444444444455454 33445566677778888888888843
No 83
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.10 E-value=2.5e-07 Score=96.61 Aligned_cols=335 Identities=13% Similarity=0.073 Sum_probs=160.4
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
..+..++..++.|.+.||++||+++..+.+.-.+...++ .......+ . ...+.+++.-++.|...........
T Consensus 65 ~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~----~~~~~~~~-~--~~~~~~~~~r~l~G~~~g~~~~~~~ 137 (502)
T TIGR00887 65 ASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVAS----GLSPGSSP-K--SVMATLCFWRFWLGVGIGGDYPLSA 137 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH----HHccCccc-c--hHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 345567788899999999999999877755443321111 11111110 0 0011233333344444433333222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------cChhHHHHH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-----------------------YEPVTCLKF 141 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-----------------------~~~~~~~~~ 141 (412)
++..+ .++.+ +..++.+.......++.++||.+++.+... .+||..+.+
T Consensus 138 -~~~~e----~~p~~---~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 138 -IITSE----FATKK---WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred -HHHHH----hcChh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 22223 56653 677888888888899999999998876531 268877643
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccc---cccccccc---------ccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhc
Q 015174 142 AAGLIMWSLPVMIILTWFTNKISSGVL---DRAKCSQS---------CCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQ 209 (412)
Q Consensus 142 ~~~~~~~s~~~~~~~l~~~~~~~~~~l---~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 209 (412)
.+.-.++ .+ . ....+||.+. .+++++++ ..+..++ ..+.++ .++..++-...|+.+++
T Consensus 210 ~~ip~~i----~~--~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~l~~ 279 (502)
T TIGR00887 210 GAVPALL----AL--Y-FRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAE--PDEVEK-ASTAVEVPKASWSDFFT 279 (502)
T ss_pred HHHHHHH----HH--H-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccC--cccccc-hhccccchhhhHHHHHH
Confidence 2211111 11 1 1235566321 11111000 0000000 000000 00000001123555544
Q ss_pred C----CcchHHHHHHHHHHHh-hh--ccchHHHHHHHhcCCCCchhH-----------H-HhhHHHHHHHHHHHHHHHHH
Q 015174 210 Q----PVLPASLAYVLLCLNV-VL--TPGSLMTAFLTQRGLNPSIIG-----------G-FSGLCASMGVAATFLSAYLV 270 (412)
Q Consensus 210 ~----~v~~~~~~~a~l~~t~-v~--~~~~~~~~y~~~~gls~~~~G-----------~-~~~~~avggllGt~l~~~l~ 270 (412)
+ +..+..+.....++.. .. +.....+.++++.|+++..-+ . ......++.+.|.++.+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~ 359 (502)
T TIGR00887 280 HFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLV 359 (502)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 2222222222222110 01 111123445567788764211 1 23345567778999999999
Q ss_pred HHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHH
Q 015174 271 RRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI 350 (412)
Q Consensus 271 ~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~ 350 (412)
+|+|+++...++.....++.......... . +......++.........|. .+ ....+..|..|++.||+..|+.+
T Consensus 360 dr~gRR~~l~~~~~~~~~~~~~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~E~~p~~~R~~~~g~~~ 434 (502)
T TIGR00887 360 DIIGRKPIQLMGFFILTVLFFVLGFAYNH-L-STHGFLAIYVLAQFFANFGP--NA-TTFIVPGEVFPTRYRSTAHGISA 434 (502)
T ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHHh-c-chhHHHHHHHHHHHHHhcCC--Cc-hhhhhhhccCchhHHHHHHHHHH
Confidence 99999988776655443332221111111 0 00111111111111112222 11 22334578889999999999999
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 015174 351 SVASLVESVMLGVAIIAND 369 (412)
Q Consensus 351 sl~~~~~ll~~~~~~~~~~ 369 (412)
+.++....+........-+
T Consensus 435 ~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHhhhHHHHHHHHhhhhhc
Confidence 9999877766665544434
No 84
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.06 E-value=3.1e-07 Score=90.35 Aligned_cols=306 Identities=18% Similarity=0.157 Sum_probs=186.6
Q ss_pred CchhhHHHHHHhh---hhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHH
Q 015174 1 MGFFSKLILIVGG---PLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVER 77 (412)
Q Consensus 1 ~g~~~~lp~ll~g---~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 77 (412)
.|+.+++|.+.|| +++..+.-|..-.|.+..+.+.- + ...+.-.... .+.+|.-..+.|+.-.
T Consensus 49 aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli----~--~G~~iR~~~~--------~~~L~~gt~l~G~gIa 114 (395)
T COG2807 49 AGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLI----A--AGILIRSLGG--------LPLLFLGTLLAGAGIA 114 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHH----H--HHHHHHhccc--------HHHHHHHHHHHHhhHH
Confidence 3778899988766 45566666666555544443311 1 1111221121 1357777888888888
Q ss_pred HHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ChhHHHHHHHHHHHHHHHHHHHH
Q 015174 78 LTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY-EPVTCLKFAAGLIMWSLPVMIIL 156 (412)
Q Consensus 78 l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-~~~~~~~~~~~~~~~s~~~~~~~ 156 (412)
+.++-....|.|| +++ +...+..........+..+||.+.=.+.+.. ||+.++.+ |...++... +
T Consensus 115 v~nVLLPslIK~~-----Fpk----~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~---WAl~allAl--~ 180 (395)
T COG2807 115 VINVLLPSLIKRD-----FPK----RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGF---WALLALLAL--L 180 (395)
T ss_pred HHHHhhhHHHHhh-----ccc----chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHH---HHHHHHHHH--H
Confidence 9999999999998 664 4566666666666666666766666666665 79987655 333333211 1
Q ss_pred HHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHH-HH---HHHHHhhhccch
Q 015174 157 TWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLA-YV---LLCLNVVLTPGS 232 (412)
Q Consensus 157 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~-~a---~l~~t~v~~~~~ 232 (412)
.| +|.. .|++... . ..+.+ -=+.+||+|.-+.... ++ .+|.+ +. +
T Consensus 181 ~W----lPq~--~r~~~~~-~-------~~~~~-------------~~~~vw~~~~aW~vtLfmGlqS~~~Y~-~~---~ 229 (395)
T COG2807 181 IW----LPQA--LREQAAS-I-------ATKLV-------------SVRKVWRSPLAWQVTLFMGLQSLLYYI-VI---G 229 (395)
T ss_pred HH----hhhc--ccccccc-c-------ccccc-------------cccccccCchhHHHHHHHHhhHHHHHH-HH---H
Confidence 22 2321 1111100 0 00000 0012577886555222 22 22211 12 1
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHH-H
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLL-F 310 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~-l 310 (412)
-++.|..++|+|+.+-|.+.+...+..+..++..|.+.+|..-.|-....... ++++.... .++++. .+.+ .
T Consensus 230 WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~--~~l~G~~G~~~~P~~----~~~lw~ 303 (395)
T COG2807 230 WLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL--LMLVGLVGLLLAPGQ----LPILWA 303 (395)
T ss_pred HHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH--HHHHHHHHHHHhhhh----HHHHHH
Confidence 25566778999999999999999999999999999999987766665544332 22222222 244432 1221 2
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGF 375 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~ 375 (412)
++.|+ +.|. .|+++..-+-++...+++.++-+|..++.-|......+.+....+|-+.=.-
T Consensus 304 ~llG~---G~G~-~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~ 364 (395)
T COG2807 304 LLLGL---GQGG-AFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWS 364 (395)
T ss_pred HHHhC---ccch-HHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChH
Confidence 33333 4456 7999999999999999999999999999999987777777777766554333
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.03 E-value=4.4e-07 Score=94.41 Aligned_cols=353 Identities=9% Similarity=0.009 Sum_probs=166.6
Q ss_pred HHHHHhhhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
+...+..+..|.+.|| ++|||++..+.+...+. .. +...... . +.+++...+.|..+..+.... .
T Consensus 59 ~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g----~~--~~~~~~~------~-~~~~~~~~l~g~g~g~~~~~~-~ 124 (475)
T TIGR00924 59 ALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLG----HF--MLAMSIY------P-DLIFYGLGTIAVGSGLFKANP-S 124 (475)
T ss_pred HHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHH----HH--HHHhccc------H-hHHHHHHHHHHhccccccCCH-H
Confidence 4456677788999999 79999988886644332 11 1111110 1 123333334454444433332 2
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
+...| .++++++++..+..+.......++.++||.++|.+....||+.+|.+.+...+++... ....++..+
T Consensus 125 ~~~a~----~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~----~~~~~~~~~ 196 (475)
T TIGR00924 125 SMVGK----LYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLT----FFAGRHMLR 196 (475)
T ss_pred HHHHH----hcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHH----HHHcccccc
Confidence 23335 3443221145567788888889999999999999999889999886644322222211 111111111
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhH----HHHHHhHH--------------------------------HHhc
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGI----EAIKLGWK--------------------------------EYMQ 209 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~g~~--------------------------------~~~~ 209 (412)
+.++++++. ++++ + +..+.....+ .....+|. ..-|
T Consensus 197 ~~~~~~~~~----~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (475)
T TIGR00924 197 DIGSVPDPL----SGQG-K---TYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVAR 268 (475)
T ss_pred cCCCCCCCc----chhh-h---hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 011000000 0000 0 0000000000 00000000 0001
Q ss_pred CC--cchHHHHHHHHHHHhhhccchHHHHHHHh-cCCCCch----hHHHhhHHHHHHHHHHHHHH----HHHHH-hchhh
Q 015174 210 QP--VLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSI----IGGFSGLCASMGVAATFLSA----YLVRR-LGILK 277 (412)
Q Consensus 210 ~~--v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~----~G~~~~~~avggllGt~l~~----~l~~R-~g~~r 277 (412)
++ .+...+....+|..+....++..+.|.++ .+.+... .+++.+.+++.-++..-+.. ++.|| .+...
T Consensus 269 ~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~ 348 (475)
T TIGR00924 269 NKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT 348 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 11 22223333334422123344445566653 3433222 67899999999988876644 44444 22222
Q ss_pred HH--HHHHHHHHHHHHH-HHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHH
Q 015174 278 AG--AAGLIFQASLLAM-AVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVAS 354 (412)
Q Consensus 278 ~~--~~~~~~~~~~l~~-~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~ 354 (412)
.. .+|..+..++... .+......... ..+...+....++..+|--....+..++.-+..|+++||+..|++.....
T Consensus 349 ~~k~~~G~~l~~~~~~~~~~~~~~~~~~~-~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~ 427 (475)
T TIGR00924 349 PLKFTLGMLFCGASFLTFAASIWFADAGG-LTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQA 427 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 11 2333332222111 11111111100 12222222333344445444566667777778899999999999997777
Q ss_pred HHHHHHHHHHHhccCCC-chhHHHHHHHHHHHHHHHH
Q 015174 355 LVESVMLGVAIIANDVS-HFGFLATLSLLSVVGAAWM 390 (412)
Q Consensus 355 ~~~ll~~~~~~~~~~~~-~f~~l~~~s~~~v~~~~~~ 390 (412)
.-..+...+.....++. ..+....++......+..+
T Consensus 428 ~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (475)
T TIGR00924 428 MGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVM 464 (475)
T ss_pred HHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 65666555555544443 3333333343333344443
No 86
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.03 E-value=2.7e-07 Score=90.60 Aligned_cols=253 Identities=13% Similarity=0.049 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----------------c
Q 015174 70 VLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK----------------Y 133 (412)
Q Consensus 70 ~~~g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~----------------~ 133 (412)
++.|+...+-+++... |+..+.++| +.++..+.++....++-++||.+++.++.. .
T Consensus 18 f~~g~G~~~lq~~~n~-----~v~~~~~~~---~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~ 89 (310)
T TIGR01272 18 FVLASGLTILQVAANP-----YVSILGPIE---TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAA 89 (310)
T ss_pred HHHHhhHHHHHhhHHH-----HHHHHCCcc---hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHH
Confidence 3455544444444333 222254433 688888999999999999999999999943 2
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcc
Q 015174 134 EPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVL 213 (412)
Q Consensus 134 ~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~ 213 (412)
.|+..+..++....+.. . .+...+.||.+ +++.+ ++ +..+ . . ..+..+++|.+
T Consensus 90 ~~~~~yl~ia~~~~~~~---i--~~~~~~~p~~~---~~~~~---~~----~~~~------~-----~-~~~~~~~~~~~ 142 (310)
T TIGR01272 90 KVHTPYLLLAGALAVLA---I--IFAFLPLPELQ---EADVA---RV----SSGD------T-----T-QKTSAFQFTHL 142 (310)
T ss_pred HHHHHHHHHHHHHHHHH---H--HHHHccCCCCC---ccccc---cc----cccc------c-----c-chhhHHhhHHH
Confidence 45555443222211111 1 11222344311 11100 00 0000 0 0 01123556665
Q ss_pred hHHHHHHHHHHHhhhccchHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHH
Q 015174 214 PASLAYVLLCLNVVLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLL 290 (412)
Q Consensus 214 ~~~~~~a~l~~t~v~~~~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l 290 (412)
.-++..-++|...-.+..+-...|+++ .|+++.+.+...+....+.++|.++.+++.+|+|.+|...++.....++.
T Consensus 143 ~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~ 222 (310)
T TIGR01272 143 VLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLS 222 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 555444444532123445567888863 59999999999999999999999999999999999998876655433222
Q ss_pred HHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 291 AMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 291 ~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.. .....+. .....+++.|. ..+. +++.......|+ .+++.|+.+++. .+...-+.+.+.+.+...|
T Consensus 223 ~l--~~~~~~~---~~~~~~~l~g~---~~s~-i~P~~~s~a~~~--~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 223 IG--AALTHGY---VAMWFVLALGL---FNSI-MFPTIFSLALNA--LGRHTSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred HH--HHHcCCH---HHHHHHHHHHH---HHHH-HHHHHHHHHHhh--hhhhhhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 11 1222211 11122222333 3344 688888888887 666778888875 4555545555554444444
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.03 E-value=1.2e-08 Score=100.62 Aligned_cols=314 Identities=15% Similarity=0.050 Sum_probs=152.4
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALG 84 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~ 84 (412)
.+-+.+-++..|.|.||++||+++..|.+. ++++.. +|.... . ...|+.+ ++.|+..-.- ...
T Consensus 78 ~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~----va~s~l--l~~~S~-------~-F~afv~aR~l~Gi~kgnl--~v~ 141 (451)
T KOG2615|consen 78 SILQFISSPLWGCLSDRYGRKPVLLACLIG----VALSYL--LWALSR-------N-FAAFVLARFLGGIFKGNL--SVI 141 (451)
T ss_pred HHHHHHhhhhhhhhhhhhCchHHHHHHHHH----HHHHHH--HHHHHH-------H-HHHHHHHHHhhhhccCch--HHH
Confidence 345678899999999999999999888663 233332 222221 1 1233332 2333333222 333
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C-hhHHH--HHHHHHHHHHHHHHHHHHH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKY---E-PVTCL--KFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~---~-~~~~~--~~~~~~~~~s~~~~~~~l~ 158 (412)
+|+.-| ++.++ +-.+..+.+....++.-++||++||.+.++. + .+.++ ++...+++.-. ..+.
T Consensus 142 rAiisd----V~sek---~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v---~~~~- 210 (451)
T KOG2615|consen 142 RAIISD----VVSEK---YRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDV---TFFP- 210 (451)
T ss_pred HHHHHh----hcChh---hccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHH---HHHH-
Confidence 555556 77653 6788999999999999999999999998822 1 11111 11111111101 1111
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH----HHHHHHHHHH---hhhccc
Q 015174 159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA----SLAYVLLCLN---VVLTPG 231 (412)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~----~~~~a~l~~t---~v~~~~ 231 (412)
-++|| ++|.+|+.++. . +-++..+-++ +...-+..+- -...|||-.+. -..+++.|+. ..+.+.
T Consensus 211 --~~lpE-TL~~rk~~~~~-~--~~~~~~~~~~--~~~~~~~~~~-v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~ 281 (451)
T KOG2615|consen 211 --WFLPE-TLPLRKRNDEH-S--TLQEAADDRL--ALLKFARIFK-VAALRNPPLLDFISVLRIFGLHYFLYLELFSGLE 281 (451)
T ss_pred --HhCCc-cccchhhcccc-c--chhhhhhhhh--hhcchhhhhh-hhhhcCccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677 66554443110 0 0000000000 0000000000 01234444333 1123333321 012222
Q ss_pred hHHHHHHH-hcCCCCchhHHHhhHHHHHHHH-HHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVA-ATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 232 ~~~~~y~~-~~gls~~~~G~~~~~~avggll-Gt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
+....|-. ..|+++.+.|-++...++++.. .-.++|++.+-.|..+....- -..+.++..+.+.... .+..
T Consensus 282 ~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~---~l~~~vP~~llls~~~----~~~~ 354 (451)
T KOG2615|consen 282 NTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLF---SLLLIVPAFLLLSLAR----TPVV 354 (451)
T ss_pred hhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHH---HHHHHHHHHHHHhccc----cchh
Confidence 22222222 3799999999999888877764 334444444434332222211 1122222222111111 1111
Q ss_pred HHHHHHHHhhhhhhhhhhh-hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIV-GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~-~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
+..+...-+-.+ ..-++ .+.+.....|+++||++||+.+|+....-.+.++..
T Consensus 355 l~~~s~l~sf~~--A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 355 LYLGSTLKSFST--ASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred hhHHHHHHHHHH--HHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 221111111111 12233 334444456999999999999999998776666665
No 88
>PRK11462 putative transporter; Provisional
Probab=99.00 E-value=6.8e-07 Score=92.59 Aligned_cols=227 Identities=9% Similarity=0.017 Sum_probs=122.4
Q ss_pred HhhhhhcchhccC----CcHHH-HHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHH-HHHHHHHHHHHHhhhhh
Q 015174 11 VGGPLVGKLMDHS----PRIPA-YICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFF-VLVLAGAVERLTGVALG 84 (412)
Q Consensus 11 l~g~~~G~~vDr~----~R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~l~~~a~~ 84 (412)
+.-|.+|.++||. +|||- +..+-+ ..++++. +++ ...+.+. .....++. .-++....-.+.++...
T Consensus 60 i~Dp~~G~~~D~t~~r~Gr~rp~il~g~i----~~~i~~~-llf--~~p~~s~-~~~~~y~~~~~~~~~~~~t~~~ipy~ 131 (460)
T PRK11462 60 ISDPCMGLLADRTRSRWGKFRPWVLFGAL----PFGIVCV-LAY--STPDLSM-NGKMIYAAITYTLLTLLYTVVNIPYC 131 (460)
T ss_pred HHhhhheehhccCCCCCCCcchhHhHHHH----HHHHHHH-HHH--hCCCCCc-chHHHHHHHHHHHHHHHHHHHhccHH
Confidence 4568899999984 45443 444433 1222232 122 1111111 11112222 22344555555555543
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------hhHHHHHHHHHHHHHHHHHHHHH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-------PVTCLKFAAGLIMWSLPVMIILT 157 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-------~~~~~~~~~~~~~~s~~~~~~~l 157 (412)
. |.+++.+|. +|-+++++.-+....++.+++|.+...++...| |.....+.+....+.. .
T Consensus 132 a-----l~~~lt~d~--~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~------~ 198 (460)
T PRK11462 132 A-----LGGVITNDP--TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMML------A 198 (460)
T ss_pred H-----HHHHhcCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHH------H
Confidence 3 666677753 478999998888888888888888877776554 3332222111111111 1
Q ss_pred HHhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHH
Q 015174 158 WFTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAF 237 (412)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y 237 (412)
......+| +++++ . + + . ..++.++..++||.++..+...+++........+....|
T Consensus 199 i~~~~~kE----~~~~~----------~--~-~----~---~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~ 254 (460)
T PRK11462 199 FCFFTTKE----RVEAP----------P--T-T----T---SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYY 254 (460)
T ss_pred HHHhccee----ccCCC----------c--c-C----C---CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhh
Confidence 12222222 11000 0 0 0 0 134577888899988875544433321012223334445
Q ss_pred HHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015174 238 LTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 283 (412)
Q Consensus 238 ~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~ 283 (412)
.++ .| ++...+.+.....+++++|+.+.+++.+|+|.++...++.
T Consensus 255 ~~y~~g-~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~ 300 (460)
T PRK11462 255 VTWILG-TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTN 300 (460)
T ss_pred hhhhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 554 45 4455777888888999999999999999999877765443
No 89
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.99 E-value=1.7e-06 Score=88.13 Aligned_cols=148 Identities=15% Similarity=0.171 Sum_probs=99.4
Q ss_pred HHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcC-CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015174 206 EYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRG-LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 283 (412)
Q Consensus 206 ~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~g-ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~ 283 (412)
.++|||.++.-+..+.+. .+ -..+.+....|++++| .+....|...+.+.+..+.-=+..+|+.||+|..+.+.++.
T Consensus 202 ~llk~~~~~~Fll~~~l~~~~-~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~ 280 (400)
T PF03825_consen 202 KLLKNPRFLVFLLAAFLIGIS-HAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLAL 280 (400)
T ss_pred HHhcCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 478899887644444433 22 2334455778899987 89999999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh--hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 284 IFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS--RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 284 ~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s--r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
.... +=-.+......+. .....+...+..+- .+|+ +-.+..++.++.+|++.|++.-++..++.++.+...
T Consensus 281 ~~~~--vR~~l~a~~~~~~--~~~~~~~~l~q~lhG~tf~~--~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 281 VAYA--VRWLLYAYFSDPW--PFIVALQLLGQLLHGLTFGL--FHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAI 353 (400)
T ss_pred HHHH--HHHHHHHHhcCCc--HHHHHHHHHHHhhhhHHHHH--HHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHH
Confidence 5322 1111122221221 11111111122222 2233 557888999999999999999999999998754433
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.92 E-value=3.6e-06 Score=87.99 Aligned_cols=115 Identities=12% Similarity=0.002 Sum_probs=70.4
Q ss_pred HHhhhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015174 10 IVGGPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE 88 (412)
Q Consensus 10 ll~g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~ 88 (412)
.++.+..|.+.|| ++|||++....++..+... + .. +.... . ..+++...+.+...-..... ..++.
T Consensus 64 ~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~---~-~~--~~~~~-----~-~ll~~~~~l~~ig~g~~~~~-~~~li 130 (489)
T PRK10207 64 YGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYF---M-TG--MSLLK-----P-DLIFIALGTIAVGNGLFKAN-PASLL 130 (489)
T ss_pred HHHHhhHHHhhhhccchHHHHHHHHHHHHHHHH---H-HH--Hhccc-----h-hHHHHHHHHHHhccccccCC-HHHHH
Confidence 3445688999999 8999998888765533211 1 11 11110 0 11222233333333333222 23344
Q ss_pred ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHH
Q 015174 89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFA 142 (412)
Q Consensus 89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~ 142 (412)
.| .++++++ +..+..+.....-.++..+||.++|.+.+..||+.+|++.
T Consensus 131 ~~----~~p~~~~-~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~ 179 (489)
T PRK10207 131 SK----CYPPKDP-RLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLC 179 (489)
T ss_pred HH----hcCCCch-hhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHH
Confidence 45 5654422 4566777888888899999999999999999999988653
No 91
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.88 E-value=6e-06 Score=82.85 Aligned_cols=309 Identities=16% Similarity=0.217 Sum_probs=182.7
Q ss_pred hhhhhcchhccCC-----cHHH-HHHHHHHHHHHHHHHHHHHHHHhcc--cc-ccccchhHHH-HHHHHHHHHHHHHHhh
Q 015174 12 GGPLVGKLMDHSP-----RIPA-YICLNTVQAAAQLLSAAMIIHAHTV--IP-TSSSMLLHPW-FFVLVLAGAVERLTGV 81 (412)
Q Consensus 12 ~g~~~G~~vDr~~-----R~~v-~~~~~~~q~~~v~~s~~~~~~~~~~--~~-~~~~~~~~~l-~~~~~~~g~~~~l~~~ 81 (412)
+-++.|..-|+++ ||.- ++...+.+.....+..- ..+.... ++ ....+....+ .+..++.|..-+..++
T Consensus 30 ~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~-a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 30 LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPF-ALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHH-HHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 4578999999999 7776 44444445443222111 1222222 11 1111221111 2223356666666666
Q ss_pred hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015174 82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTN 161 (412)
Q Consensus 82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~ 161 (412)
+. .|...| +++++ +..|+-+.+=.+..+.-+++..+.|.++.-+++.--.-+.-....+.+....+-+|
T Consensus 109 ~~-lALl~D----~~~e~---~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~w--- 177 (403)
T PF03209_consen 109 SF-LALLAD----LAPEE---RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALW--- 177 (403)
T ss_pred HH-HHHHHh----cCCHh---hhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 55 344456 66653 67888888888888999999999999998877665333333333333332222222
Q ss_pred hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-
Q 015174 162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ- 240 (412)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~- 240 (412)
+.++ . .+++. +++ ++++ ...++.|+.++++|..+.-+.+-++.....+.-|.+.-.|.-+
T Consensus 178 g~E~-r--~~~~~----~~~---~~~~---------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~V 238 (403)
T PF03209_consen 178 GQEP-R--RSRRA----AAA---ERPR---------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEV 238 (403)
T ss_pred hccc-C--Ccccc----cCC---CCCC---------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHH
Confidence 2211 1 01110 000 0011 1234688999999988875554444421123346677778865
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHH-HhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVR-RLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~-R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
+|+|+.+---+-+.-+.|.++|=.+.+++.. |.+..|+-.++...-..+....+.....++ ..++-.++++-+
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~------~~~~~~~~~l~G 312 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGS------PWLFRPGVFLLG 312 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhccc------chHHHHHHHHHH
Confidence 8999999888888888888888888887755 788877766666543333333222222222 122223333334
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 357 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ 357 (412)
+|--.|.+.....+-+.+.+++.|..-|..+..|-..-
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~ 350 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIAR 350 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHH
Confidence 45555999999999999999999999999999998743
No 92
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=2.5e-06 Score=85.64 Aligned_cols=160 Identities=15% Similarity=0.146 Sum_probs=104.9
Q ss_pred HHhHHHHHHhHHHHhcCCcchHHHHHH-HHH---HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHH
Q 015174 194 DVGIEAIKLGWKEYMQQPVLPASLAYV-LLC---LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAY 268 (412)
Q Consensus 194 ~~~~~~~~~g~~~~~~~~v~~~~~~~a-~l~---~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~ 268 (412)
...++++.+-+++.++|+-+.- +..+ ++| .+... +....|.+ .+|++..++.++-....+.++.|++++|+
T Consensus 235 ~~g~k~L~~t~k~i~~~~~i~~-FLiA~~~~~DGv~til---~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~ 310 (438)
T COG2270 235 RNGFKELKSTFKEIRGRKNLVL-FLIARFFYIDGVNTIL---AMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGF 310 (438)
T ss_pred HHHHHHHHHHHHHHhcccchHH-HHHHHHHHHhhHHHHH---HHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677777888888884443 3332 233 21111 23677888 69999999999999999999999999999
Q ss_pred HHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHH-HHHhhhhhhhhhhhhhHHhhccCCcccchhHHH
Q 015174 269 LVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCL-IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGT 347 (412)
Q Consensus 269 l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g-~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g 347 (412)
|.+|+|.+++...++... ...|+....... +.-.+..| +++--+|- .--...+++-+.+|+++-|+..|
T Consensus 311 Ld~rfg~k~vl~~~lvi~---~~~~~~~~~~~~-----~~~f~i~gll~g~s~G~--~qA~SRSy~~~lvp~~k~~~fFg 380 (438)
T COG2270 311 LDERFGSKPVLMIGLVIL---SIAALYLIFLEG-----ELDFWILGLLVGTSLGG--AQASSRSYLARLVPKGKEGRFFG 380 (438)
T ss_pred HHHHhCCceeehHHHHHH---HHHHHHHHHccc-----cHHHHHHHHHHHHhcch--HHHHHHHHHHHhCCCccccceee
Confidence 999999999888776532 233333333222 11111112 11112222 22355677888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 015174 348 TEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 348 ~~~sl~~~~~ll~~~~~~~~ 367 (412)
.++-.-.....+.+.++.+.
T Consensus 381 lyaltgra~S~~gp~lv~v~ 400 (438)
T COG2270 381 LYALTGRAASFLGPFLVAVI 400 (438)
T ss_pred hhhhhhhHHHHHHHHHHHHH
Confidence 99888777666555555444
No 93
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.86 E-value=2.8e-06 Score=87.27 Aligned_cols=236 Identities=14% Similarity=0.099 Sum_probs=133.7
Q ss_pred ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH-HHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Q 015174 91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT-CLKFAAGLIMWSLPVMIILTWFTNKISSGVLD 169 (412)
Q Consensus 91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~-~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~ 169 (412)
+.|++..+ ++|-+++|++=+-.-.++.++.-.+-+.+++..+... ...+......++......++.+++.+.|+..+
T Consensus 136 l~~~iT~d--~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~ 213 (467)
T COG2211 136 LGPEITQD--PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVE 213 (467)
T ss_pred cchhhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 56667664 2379999999888888887777777777777665442 11111111122221112224455555552211
Q ss_pred cccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhcc-chHHHHHHHh-cCCCCch
Q 015174 170 RAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTP-GSLMTAFLTQ-RGLNPSI 247 (412)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~-~~~~~~y~~~-~gls~~~ 247 (412)
+ ++. + + ....+..+.+...++||-++--+.+.++++. .... ++.++-|.++ +|.++..
T Consensus 214 ~-~~~-----~------~-------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~-~~~i~~s~~~yy~~y~lg~~~l~ 273 (467)
T COG2211 214 T-QPT-----K------T-------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFI-AFNIRGSIMVYYVTYVLGDPELF 273 (467)
T ss_pred c-ccC-----c------c-------cccccHHHHHHHHHccchHHHHHHHHHHHHH-HHHHHhhhhheeEEEEcCChHHH
Confidence 1 100 0 0 0112344567788999999886665555533 1222 3445555654 8999998
Q ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhh
Q 015174 248 IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDI 327 (412)
Q Consensus 248 ~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl 327 (412)
.+........+.+.+..+.|++.||+|.+++..++..... +.....++.+..+ ....++ ..+...+|.-..+.
T Consensus 274 ~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~---i~~~~~~f~~~~~--~~l~~~--~~~i~~~g~~~~~~ 346 (467)
T COG2211 274 AYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA---VGYLLLYFTPAGS--VVLIVV--ALIIAGVGTGIANP 346 (467)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH---HHHHHHHhhcCcc--hHHHHH--HHHHHHHHhhcccc
Confidence 8899999999999999999999999999999888755322 2222333333211 111111 11122233322333
Q ss_pred hhhHHhhccC-------CcccchhHHHHHHHHHHH
Q 015174 328 VGAQILQTGI-------PSSKANLIGTTEISVASL 355 (412)
Q Consensus 328 ~~~~l~Q~~v-------p~~~~G~v~g~~~sl~~~ 355 (412)
..-.++-+.+ -.+.-|...|.+...+..
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~ 381 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL 381 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH
Confidence 3333333322 456778888888887776
No 94
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.86 E-value=4.4e-06 Score=83.44 Aligned_cols=317 Identities=15% Similarity=0.083 Sum_probs=173.8
Q ss_pred hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhh
Q 015174 3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGV 81 (412)
Q Consensus 3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~ 81 (412)
|+..-.+.+.+.++|.++||..+|+.+......-++- |. +.+-.... ..+..|++ ++++++.-.+.++
T Consensus 55 faff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg----~~-lF~pAa~~------~~y~~FL~~lFila~Gi~~Let 123 (422)
T COG0738 55 FAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG----AA-LFWPAASS------KSYGFFLVALFILASGIGLLET 123 (422)
T ss_pred HHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH----HH-HHhhhhhh------hhHHHHHHHHHHHHhhhHHHHh
Confidence 6777888999999999999999999988886643222 32 12211211 11233333 2334444433334
Q ss_pred hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cChhHHHHH-HHHHHHHHHH----
Q 015174 82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-----YEPVTCLKF-AAGLIMWSLP---- 151 (412)
Q Consensus 82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-----~~~~~~~~~-~~~~~~~s~~---- 151 (412)
+... ++..+-+++ .-++-...++.-...+.++||.+|+.++-. .+....... ..-...+..+
T Consensus 124 aaNp-----~v~~lg~~~---~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~ 195 (422)
T COG0738 124 AANP-----YVTLLGKPE---SAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLIL 195 (422)
T ss_pred ccch-----HHHHhCCch---hHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHH
Confidence 4322 222354432 345555577888889999999999999973 111110000 0000000000
Q ss_pred -HHHHHHHHh---hhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhh
Q 015174 152 -VMIILTWFT---NKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVV 227 (412)
Q Consensus 152 -~~~~~l~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v 227 (412)
...+++... .|.|+ .++.+++ . .+ .+ ..+....+|||.++-+...-++|..+=
T Consensus 196 ~~~lvll~v~~~~~k~p~-----~~~~~~~-------~-~~--------~~--~~~~~~l~~~~~~~~gvl~~FlYVG~E 252 (422)
T COG0738 196 AGLLVLLAVLILLSKLPD-----LQVAAPS-------L-GA--------SG--SAGLSSLFQNKHLRLGVLAIFLYVGAE 252 (422)
T ss_pred HHHHHHHHHHHHhccCCc-----CCccccc-------c-cc--------cc--cchHHHHHhChHHHHHHHHHHHHHhHH
Confidence 000011111 22322 1111000 0 00 00 015667889999999998889994422
Q ss_pred hccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015174 228 LTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQN 306 (412)
Q Consensus 228 ~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~ 306 (412)
...++.++.|+.+ +|+++.+-....+.-=++.++|=++..++.+|+...|....... +..++|......+. .+.
T Consensus 253 va~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~---~~ill~~~~~l~~g--~v~ 327 (422)
T COG0738 253 VAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYAL---IAILLLLAVALIGG--VVA 327 (422)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH---HHHHHHHHHHHhcC--hHH
Confidence 2345568889876 89999999999999999999999999999999999998764432 22233333333332 122
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCc
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSH 372 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~ 372 (412)
...++..|.+.| . +|+...+...|..= ++-...++...+-.-+-..+.++.+.+...-+.
T Consensus 328 ~~~l~~ig~F~s---i-mfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 328 LYALFLIGLFNS---I-MFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred HHHHHHHHHHhH---H-HHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhh
Confidence 233334444443 3 57777777777633 333333443333333344445555555544333
No 95
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.82 E-value=2.1e-07 Score=100.16 Aligned_cols=263 Identities=11% Similarity=0.036 Sum_probs=142.3
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc----cc-------------------c------
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHT----VI-------------------P------ 55 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~----~~-------------------~------ 55 (412)
-.+..++..+++|.+.||.+|+|.+....++-.+.-.+... ..... .+ .
T Consensus 77 ~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~al--phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 154 (633)
T TIGR00805 77 YEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSL--PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALR 154 (633)
T ss_pred hhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhC--hHHhcCCccccccccccccccccccccccCCCCCCcc
Confidence 45678889999999999999999877665533222111111 11000 00 0
Q ss_pred --------c-ccc-chhHHHH-HHHHHHHHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHH
Q 015174 56 --------T-SSS-MLLHPWF-FVLVLAGAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGAS 124 (412)
Q Consensus 56 --------~-~~~-~~~~~l~-~~~~~~g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~ 124 (412)
. ..+ ...+.++ +.=++.|..+....+ ...++..| .++++ +..+..+.+...-.+++.+||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~-~~~~~i~d----~~~~~---~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 155 PTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFP-LGISYIDD----FAKSK---NSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred ccccccccccccCCCceehhhHHHHHHHhccCCcchh-cCchhhhc----cCCcc---ccHHHHHHHHHHHHhhhHHHHH
Confidence 0 000 0011222 222344444433322 23344556 45543 6788899999999999999999
Q ss_pred HHHHHHhhc-C---------------------hhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccc--ccccCC
Q 015174 125 LFGILLSKY-E---------------------PVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCS--QSCCRT 180 (412)
Q Consensus 125 lgG~L~~~~-~---------------------~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~--~~~~~~ 180 (412)
++|.+...+ + |+..|++.+...++.. +. + ...|++.+++.++. +...++
T Consensus 227 lgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~---v~-l---~~~p~~lp~~~~~~~~~~~~~~ 299 (633)
T TIGR00805 227 LGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS---IP-F---FFFPKALPKEGKRVNVDVHETE 299 (633)
T ss_pred HHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH---HH-H---HhCccccCCcccccchhhhhhh
Confidence 999998753 1 4444443222222211 11 1 12232111110100 000000
Q ss_pred C-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHH-
Q 015174 181 S-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCAS- 257 (412)
Q Consensus 181 ~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~av- 257 (412)
. ++....+ ........++..+.++.+++||.++.......+......++....+.|+. ++|+++...|++.+...+
T Consensus 300 ~~~~~~~~~-~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~ 378 (633)
T TIGR00805 300 KLEKSEDKS-RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLP 378 (633)
T ss_pred ccccccccc-chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhh
Confidence 0 0000000 00001123455567889999999988555444432212344555777876 589999999999998776
Q ss_pred HHHHHHHHHHHHHHHhchh--hHHHHHHHH
Q 015174 258 MGVAATFLSAYLVRRLGIL--KAGAAGLIF 285 (412)
Q Consensus 258 ggllGt~l~~~l~~R~g~~--r~~~~~~~~ 285 (412)
++++|.++.+++.+|++.. +...++...
T Consensus 379 ~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~ 408 (633)
T TIGR00805 379 AAGLGYLIGGFIMKKFKLNVKKAAYFAICL 408 (633)
T ss_pred HHHHHHhhhhheeeeecccHHHHHHHHHHH
Confidence 6789999999999999853 444444443
No 96
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.80 E-value=2.5e-05 Score=80.79 Aligned_cols=186 Identities=11% Similarity=0.073 Sum_probs=92.3
Q ss_pred hHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015174 203 GWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 281 (412)
Q Consensus 203 g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~ 281 (412)
.++..+|+|..+- ++.+.+.|-. -.+++..++.|.++ .+++........++.+.+.++..+.+++..|+|.+|+..+
T Consensus 244 ~~~~vlk~~~~Wllslly~~tFG~-fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~ 321 (462)
T PRK15034 244 DQLPVLQRLHLWLLSLLYLATFGS-FIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLI 321 (462)
T ss_pred HHHHHhCCCchhHHHHHHHHHHHH-HHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHH
Confidence 4555788886554 4444444411 12334344455543 3343333222345567777788899999999999999888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH----HHhhhhhhhhhhhhhHHhhccCCc------------------
Q 015174 282 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI----VLSRLGHMSYDIVGAQILQTGIPS------------------ 339 (412)
Q Consensus 282 ~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~----~~sr~GLw~~dl~~~~l~Q~~vp~------------------ 339 (412)
+.+...++..+. ....+... ..+...+..++ ++.++| |=++-++.=+..|+
T Consensus 322 ~~i~~~i~~~~~-~l~lp~~~--~~~~~~~~~~~~~l~~~~G~g----ngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~ 394 (462)
T PRK15034 322 NFIFMAIFSALL-FLTLPGTG--SGNFIAFYAVFMGLFLTAGLG----SGSTFQMIAVIFRQITIYRVKMKGGSDEQAQR 394 (462)
T ss_pred HHHHHHHHHHHH-HHHhcccc--ccHHHHHHHHHHHHHHHhccc----chHHHHhhHHHHhhhhhhcccccccchhHHhh
Confidence 776433332221 12222211 11222222221 122222 11222121111121
Q ss_pred ---ccchhHHHHHHHHHHHHHHHHH-HHHHhc-cCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 340 ---SKANLIGTTEISVASLVESVML-GVAIIA-NDVSHFGFLATLSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 340 ---~~~G~v~g~~~sl~~~~~ll~~-~~~~~~-~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~ 397 (412)
++.|.++|.-+++--.-+.+.+ +++... ...+.-+.+....+..+.+..+.+..|.||
T Consensus 395 ~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 395 EAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2577777777776655333333 223222 223334445555555677777888888777
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.80 E-value=1.3e-05 Score=83.90 Aligned_cols=119 Identities=12% Similarity=-0.046 Sum_probs=69.7
Q ss_pred hhhhcchhcc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 015174 13 GPLVGKLMDH-SPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDW 91 (412)
Q Consensus 13 g~~~G~~vDr-~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDw 91 (412)
.+..|.+.|| ++||+++....+...+. .. ...+.... . +.+++...+.+...-+.... ..++..|
T Consensus 74 ~~~~G~LaDr~~G~r~~~~~g~~~~~ig----~~--l~~~~~~~-----~-~~l~~~~~l~gig~g~~~~~-~~~l~~~- 139 (500)
T PRK09584 74 VAIGGWLGDKVLGTKRVIMLGAIVLAIG----YA--LVAWSGHD-----A-GIVYMGMATIAVGNGLFKAN-PSSLLST- 139 (500)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHHHHH----HH--HHHHhccc-----H-HHHHHHHHHHHHhhhcccCC-HHHHHHH-
Confidence 4578999999 59999988776544332 11 11111110 1 11222223344433333222 2233344
Q ss_pred eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHH
Q 015174 92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWS 149 (412)
Q Consensus 92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s 149 (412)
.++++++ +.+++.+.......++..+||.++|.+.+..||+..|.+......++
T Consensus 140 ---~f~~~~~-~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 140 ---CYEKDDP-RLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLIT 193 (500)
T ss_pred ---hcCCCch-hhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 4554322 45667777778888999999999999999999999887644333333
No 98
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.77 E-value=6.2e-08 Score=97.85 Aligned_cols=311 Identities=12% Similarity=-0.015 Sum_probs=162.5
Q ss_pred hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015174 3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA 82 (412)
Q Consensus 3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a 82 (412)
+...+.+.+++|..|.+.||++|+++|.+...+=..++.++.. .. ..|.+.+.=-+.|..+...+..
T Consensus 75 ~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f-------s~------~Fwq~~l~R~~vGiGeAs~~~i 141 (493)
T KOG1330|consen 75 TVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF-------SN------HFWQVLLCRGFVGIGEASYSPI 141 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH-------HH------HHHHHHHHHHHhccchhhhccc
Confidence 4556788999999999999999999998887655555444331 01 2122222222566666666655
Q ss_pred hhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 015174 83 LGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLKFAAGLIMWSLPVMIILTWFTN 161 (412)
Q Consensus 83 ~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~~~~~~~~~s~~~~~~~l~~~~ 161 (412)
.+.-| -| .++++ +-.+.-......--+.-.+|=..|+.+-+..+ ||.+++..+...++.... ...
T Consensus 142 a~s~I-aD----~f~~~---~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L----~~~-- 207 (493)
T KOG1330|consen 142 APSLI-AD----SFPDD---KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLL----VFL-- 207 (493)
T ss_pred chhHh-hh----cCcch---hhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHH----HHh--
Confidence 54433 36 67654 56666666666666666777777777777655 999987655444433321 111
Q ss_pred hccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhh-hccchHHH-HHH
Q 015174 162 KISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVV-LTPGSLMT-AFL 238 (412)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v-~~~~~~~~-~y~ 238 (412)
-++|| +|..++ +.+.+++...+ .....+..+...++|++-. ++.+....+-+. ..+.+..+ .|.
T Consensus 208 f~~eP--~rga~~--~~~~~~~~~~~---------~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~ 274 (493)
T KOG1330|consen 208 FVREP--ERGARD--EVDGENKMVKP---------FTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYS 274 (493)
T ss_pred hccCc--cccccc--ccccCCcCCCC---------ccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHH
Confidence 22331 121111 11111100001 1223345666677666655 444444333211 22222222 333
Q ss_pred Hh-cC----CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HHHhc--CCCcCcchHH
Q 015174 239 TQ-RG----LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV--AVYWS--GSLSQQNPLL 309 (412)
Q Consensus 239 ~~-~g----ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v--~~~~~--g~~~~~~~~~ 309 (412)
++ .| .+.-..|+.-+.+++|.+.|..+..++.+++....+...+.....+.....+ ...++ ..-+......
T Consensus 275 ~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~i 354 (493)
T KOG1330|consen 275 YELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLI 354 (493)
T ss_pred HHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHH
Confidence 43 34 4444444555666777777777777776655443333322221111111111 01111 1101112233
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE 357 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ 357 (412)
++..|+.. .|.---++.-++-+.|||++|-.+.+.+..+-..++
T Consensus 355 l~~~g~~~----~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fg 398 (493)
T KOG1330|consen 355 LFLVGETI----SWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFG 398 (493)
T ss_pred HHHHHHHH----HhcccccccceeeEecCcccccHHHHHHHHHHHHhc
Confidence 34444433 233334566778888999999999999998888753
No 99
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.74 E-value=2.3e-05 Score=81.14 Aligned_cols=319 Identities=14% Similarity=0.100 Sum_probs=166.5
Q ss_pred HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015174 9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE 88 (412)
Q Consensus 9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~ 88 (412)
.++-+..+|.+.||++||..+..+.+....+ +.+........ ....+.+.=++.|...-+.+.....
T Consensus 73 ~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~----~~~~~~s~~~~------~~e~li~GR~i~Gl~~gl~~~~~pm--- 139 (485)
T KOG0569|consen 73 GMIGSFSSGLLADRFGRKNALLLSNLLAVLA----ALLMGLSKSAP------SFEMLILGRLIVGLACGLSTGLVPM--- 139 (485)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHH----HHHHHHHHHhh------hHHHHHHHHHHHHHHhHHHHHHHHH---
Confidence 4455667888999999998888887655443 21111111110 1112333334555555555555444
Q ss_pred ccceeeecCCCchhhhHHHHHHHHHH-HHHHHHHHHHHHHHHH--hhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 89 RDWAVLLAGINRPIALAKANAVLNRI-DLLCEIAGASLFGILL--SKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 89 RDwv~~l~~~~~~~~L~~~Ns~l~~i-d~v~~llgP~lgG~L~--~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
|+.++.++ ++...-+.+..+ ..++.++|-.+|--=+ +--.|+..+.+......+.+ ..+...||
T Consensus 140 --yl~E~sP~----~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l-------~~l~~~PE 206 (485)
T KOG0569|consen 140 --YLTEISPK----NLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQL-------ALLPFLPE 206 (485)
T ss_pred --HHhhcChh----hhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHH-------HHHhcCCC
Confidence 66678775 355554444444 3344555533332211 12237765544333333322 22345676
Q ss_pred ccc---c-cccccccccCCCCC--CCCCCchhhhHHhHHH---------HHHhHHHHhcCCcchHHHHHHHHHHHhhhcc
Q 015174 166 GVL---D-RAKCSQSCCRTSNE--GPVPDADNIVDVGIEA---------IKLGWKEYMQQPVLPASLAYVLLCLNVVLTP 230 (412)
Q Consensus 166 ~~l---~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~ 230 (412)
.+. . +.++. +.+++-+ ....|.++......++ -...++.++++|..|-.+........ ...+
T Consensus 207 SPk~Ll~~k~~~~--~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~-~qq~ 283 (485)
T KOG0569|consen 207 SPKYLLIKKGDEE--EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSF-AQQF 283 (485)
T ss_pred CcchHHHHcCCHH--HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHH-HHHh
Confidence 320 1 11111 0000000 0000000000000111 12258889999999986544433321 1233
Q ss_pred chH--HHHH----HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-HhcCCCc
Q 015174 231 GSL--MTAF----LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGSLS 303 (412)
Q Consensus 231 ~~~--~~~y----~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~~g~~~ 303 (412)
+++ ...| .++-|+++..--+.-...++.-+..|++.+++.+|+|+++..+.+......+.+..... .......
T Consensus 284 sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~ 363 (485)
T KOG0569|consen 284 SGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFG 363 (485)
T ss_pred cCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 331 2223 34679999988888888888999999999999999999988888877655554444332 2211110
Q ss_pred CcchHHHHHHH----HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 304 QQNPLLFFLCL----IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 304 ~~~~~~l~~~g----~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
++.. +....+ ++.-.+|+ ...---+..|.+|++.|..+.++..+.|+....+.
T Consensus 364 ~~~~-y~~i~~~~~~~~~f~~G~---gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv 420 (485)
T KOG0569|consen 364 SWLS-YLCIAAIFLFIISFAIGP---GPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIV 420 (485)
T ss_pred hHHH-HHHHHHHHHHHHhhhcCC---CchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHH
Confidence 1111 111111 11112232 22334567899999999999999999999865443
No 100
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.1e-05 Score=83.65 Aligned_cols=351 Identities=13% Similarity=0.057 Sum_probs=196.7
Q ss_pred HHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhh
Q 015174 8 ILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAV 87 (412)
Q Consensus 8 p~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai 87 (412)
-+++--.+.|.++||++-|++...+.+.-.++-++ . +++.-.. . +.++++=++-|..+...-.+... +
T Consensus 85 G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l-~-P~aa~~~--------~-~~~~~~R~lqGl~~g~~~pa~~~-i 152 (466)
T KOG2532|consen 85 GYILGQIPGGYLADKFGARRVFFISGLISALLTLL-T-PLAASIG--------F-YLLLVLRFLQGLGQGVLFPAIGS-I 152 (466)
T ss_pred HHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHH-H-HHHHHhc--------c-hhhHHHHHHhHHHHhHHHhhhhc-e
Confidence 34555667899999999999988886655443221 1 1111111 1 23333334555444433334333 3
Q ss_pred cccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015174 88 ERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-YEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG 166 (412)
Q Consensus 88 ~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~ 166 (412)
...|.|.- |-.+.-+.+..-.|.+++++=+++|.|.+. +||+..|.+.+....+-..+.+ ..++.-|+
T Consensus 153 ~~~W~P~~-------Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~---~~~~d~P~- 221 (466)
T KOG2532|consen 153 LAKWAPPN-------ERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWF---LFYSDSPS- 221 (466)
T ss_pred eeeECCHH-------HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHH---HHhcCCcc-
Confidence 33475433 678888888899999999999999999998 9999999875554444332211 11122222
Q ss_pred ccccccccccccCCC-CCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHh-cCCC
Q 015174 167 VLDRAKCSQSCCRTS-NEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQ-RGLN 244 (412)
Q Consensus 167 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~-~gls 244 (412)
+.+...+++++. +++...++.+ . ...--|+..+++|.+++..............+..-.+.|+++ +|++
T Consensus 222 ---~h~~is~~El~~I~~~k~~~~~~---~---~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~ 292 (466)
T KOG2532|consen 222 ---KHPNISEKELKYIEKGKSEAHVK---K---KPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD 292 (466)
T ss_pred ---cCCCCCHHHHHHHHhcccccccC---C---CCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC
Confidence 111100000000 0000000000 0 011258889999999995554333311012223347778876 8999
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhch-------hhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGI-------LKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~-------~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
-..-|++-++--+....-.++++.+..|+-. +|...-.+.. ....+..+...+.+.......+.++..++..
T Consensus 293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~-~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~ 371 (466)
T KOG2532|consen 293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAF-GGPAVFLLVLAFTSDEHRLLAVILLTIAIGL 371 (466)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHH-HHHHHHHHeeeecCCCcchHHHHHHHHHHHH
Confidence 9999999988888888777777777666544 2222212111 1111111111122221112234444333333
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC---CCchhHHHHHHHHHHHHHHHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND---VSHFGFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~---~~~f~~l~~~s~~~v~~~~~~~~~~ 394 (412)
++...-.+..+. .. .-|+..|.+.|+.+.......++.+.++...-. .++....-++..+....+...|..+
T Consensus 372 ~g~~~~Gf~~~~---~~--~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 372 SGFNISGFYKNH---QD--IAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred cccchhhhHhhh---hh--ccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 332221111111 11 167889999999999999999888888766653 4578888888888888888888888
Q ss_pred hc
Q 015174 395 LL 396 (412)
Q Consensus 395 ~~ 396 (412)
..
T Consensus 447 ~s 448 (466)
T KOG2532|consen 447 GS 448 (466)
T ss_pred ec
Confidence 54
No 101
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.63 E-value=8.8e-07 Score=88.08 Aligned_cols=311 Identities=13% Similarity=0.009 Sum_probs=181.3
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA 86 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a 86 (412)
+-.++.+|+.|.++||..++--|++..++- ..|++ ++.+.. ..+.++++=.+=|.-+..++++- .+
T Consensus 117 ~~qllvnp~~G~l~~~iGy~ipm~~Gl~vm----f~sTi--lFafg~-------sy~~l~vAR~LQgvgsA~~~tsg-la 182 (464)
T KOG3764|consen 117 LVQLLVNPFFGNLIDRIGYKIPMVAGLFVM----FLSTI--LFAFGN-------SYPMLFVARSLQGVGSAFADTSG-LA 182 (464)
T ss_pred HHHHHhcccchhhHHHhccccHHHHHHHHH----HHHHH--HHHHcc-------hhHHHHHHHHHhhhhHHHHHhhh-HH
Confidence 567899999999999999988887776533 33343 333332 11334554445555555555543 33
Q ss_pred hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Q 015174 87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSG 166 (412)
Q Consensus 87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~ 166 (412)
+.-| .+++| . +..++......--....++||..||.+.++.|-..-|.+.+....+..+..++ . +++
T Consensus 183 mlAd----~f~~d-~-er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~---v---i~p- 249 (464)
T KOG3764|consen 183 MLAD----VFPED-N-ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLL---V---IEP- 249 (464)
T ss_pred HHHH----Hcccc-h-hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHh---e---eCc-
Confidence 4345 66654 2 56788888888888899999999999999999998887655444443322111 1 111
Q ss_pred ccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCC-cchHHHHHHHHHHHhhhccchHHHHHHH-hcCCC
Q 015174 167 VLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQP-VLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLN 244 (412)
Q Consensus 167 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls 244 (412)
.+.++. +++++ ..+..++++| +.....+.....+. ....+.....+.. +..-+
T Consensus 250 --~~~~~~------~~~~~----------------~~~~~Ll~dP~I~~~agai~~~n~~-lafLePtlslwm~e~m~~p 304 (464)
T KOG3764|consen 250 --TEMDPD------STEQG----------------TPMWSLLMDPYILLIAGAITFSNSS-LAFLEPTLSLWMLETMFTP 304 (464)
T ss_pred --cccCcc------ccccC----------------ccHHHHHhCchHhhhhcchhhccch-HHHhCcccHHHHHHhccCC
Confidence 111110 00000 1233345555 33333333333332 2334555666665 46745
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHH-H--HHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAM-A--VAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~-~--v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
.-.+|+.+--.++...+|+-+++.+.+|++..|-.. .++.+.... + ..++..+ +..+++-..|+ ++|
T Consensus 305 ~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~---~~~gl~~~G~~~~~iP~~~~----~~~L~vp~~~l---~~~ 374 (464)
T KOG3764|consen 305 GWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLL---SLGGLATVGVSSGPIPFATS----IAQLWVPNFGL---GFG 374 (464)
T ss_pred CcceeeeecccccchhccCchHHHHHHhcCchhHHH---HHHHHHHHHHHhchhHhhhh----HHHHhhhhHHH---HHH
Confidence 549999999999999999999999999999766332 111111111 0 0011111 12222222222 223
Q ss_pred hhhhhhhhhHHhhccCCccc------chhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015174 322 HMSYDIVGAQILQTGIPSSK------ANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL 379 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~------~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~ 379 (412)
.-+.|-+..-.+|..+++++ -|.|.+++...-.....+.+..+......-.|.++..+
T Consensus 375 i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~i 438 (464)
T KOG3764|consen 375 IGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTI 438 (464)
T ss_pred HHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHH
Confidence 33578888888888876643 46777776665555555555666666666677776655
No 102
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.57 E-value=0.0003 Score=73.23 Aligned_cols=116 Identities=17% Similarity=0.098 Sum_probs=61.3
Q ss_pred hHHHHHHhhhhhcchhc----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----ccccccchhHH-H-HHHHH-HH
Q 015174 5 SKLILIVGGPLVGKLMD----HSPRIPAYICLNTVQAAAQLLSAAMIIHAHTV-----IPTSSSMLLHP-W-FFVLV-LA 72 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vD----r~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~-----~~~~~~~~~~~-l-~~~~~-~~ 72 (412)
..+-.++..|.+|.+.| |++|||..+..-..- .+++...+.+.... ...++....+. + +++.+ +.
T Consensus 48 ~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~---~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~ll 124 (477)
T TIGR01301 48 GPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL---VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWIL 124 (477)
T ss_pred HHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH---HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHH
Confidence 45667788999999999 499999866542211 11111111111110 00000001111 1 11111 22
Q ss_pred HHHHHHHhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 73 GAVERLTGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGIL 129 (412)
Q Consensus 73 g~~~~l~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L 129 (412)
....+....+. +|+ ++.+++++ +++...+|+.......++.++|+.+||.+
T Consensus 125 d~~~n~~~~p~-rAL----iaDl~p~~-~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 125 DVANNMLQGPC-RAF----LADLTGGD-ARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHH-HHh----cccccCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333222 333 44488764 21356899999999999999999999976
No 103
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.56 E-value=2.7e-05 Score=79.15 Aligned_cols=264 Identities=10% Similarity=0.066 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccCCCCCCCCCC
Q 015174 109 AVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRAKCSQSCCRTSNEGPVPD 188 (412)
Q Consensus 109 s~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 188 (412)
.+.|.=-+++-.++..++|.++. .++...+|.......+.. + +....|.++ .++.+. ++.++ .+++
T Consensus 141 G~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~----l-ll~~~~~~~--~~~~~~--~~~~~----~~~~ 206 (412)
T PF01306_consen 141 GRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILL----L-LLLLLKPDV--PPQAEV--ADALG----AKKD 206 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH----H-HHHSS---S--SSSS-S--STTSS----S---
T ss_pred chHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHH----H-HHHHcCCcC--chhhhh--hcccc----cCCC
Confidence 56777788889999999999998 466666664332222221 1 111111110 000000 00000 0000
Q ss_pred chhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH----hcCCCCchhHHHhhHHHHHHHHHHH
Q 015174 189 ADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT----QRGLNPSIIGGFSGLCASMGVAATF 264 (412)
Q Consensus 189 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~----~~gls~~~~G~~~~~~avggllGt~ 264 (412)
+ . . .+.....+|+|.++.-..+-..-.+....+|.+...|.+ +.+.+.+.+|.+-+.+.+.....=.
T Consensus 207 -----~--~-~-~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~ 277 (412)
T PF01306_consen 207 -----K--V-S-LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMF 277 (412)
T ss_dssp ------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----C--C-c-HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHH
Confidence 0 0 0 234667889998887333211111112446777777765 3567778999999999999999999
Q ss_pred HHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchh
Q 015174 265 LSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANL 344 (412)
Q Consensus 265 l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~ 344 (412)
+.|++.+|+|.++.++++..... .=.....+.+++ ..+...=-+-.-.+++ .-++..++.++..|++...+
T Consensus 278 ~~p~li~rig~k~~Lllag~i~~--iRi~~~~~~~~~-----~~i~~~klLH~~e~~l--~lva~fkYI~~~fd~rlsAt 348 (412)
T PF01306_consen 278 FSPWLINRIGAKNLLLLAGVIMA--IRIIGSGFATNP-----WVISLIKLLHALEFPL--LLVAAFKYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHH--HHHHHHHT--SH-----HHHHHHHHHHHHHHHH--HHHHHHHHHHHHS-GGGHHH
T ss_pred HHHHHHHhcChHhHHHHHHHHHH--HHHHHHhhhcch-----HHHHHHHHHHHHHHHH--HHHHHHHHHHHhCCHhHHHH
Confidence 99999999999999887754311 111111222211 1111111111223344 55788888899888887666
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHhccCCCchh-HHHHHHHHHHHHHHHHHHHHhcCCCccCCccccc
Q 015174 345 IGTTEISVASL-VESVMLGVAIIANDVSHFG-FLATLSLLSVVGAAWMFCHWLLNPTDEQRSLFSF 408 (412)
Q Consensus 345 v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~-~l~~~s~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 408 (412)
+..+...+... ...+.....+...|.--|. .-.+++. +.....++..+.-| +++++.+|.
T Consensus 349 ~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~--iv~~~~li~~f~l~--~~~~~~~~~ 410 (412)
T PF01306_consen 349 LYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGL--IVLPFTLISAFTLK--KDKKQIVHP 410 (412)
T ss_dssp HHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHS----SSSTTCCC
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHH--HHHHHHHHheeeec--CCCcccccC
Confidence 66554322222 2222233334444443332 3333332 34444555555444 335777775
No 104
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.54 E-value=7.2e-05 Score=75.19 Aligned_cols=331 Identities=15% Similarity=0.045 Sum_probs=176.6
Q ss_pred HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015174 11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD 90 (412)
Q Consensus 11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD 90 (412)
++=.+-|-+.||++-|++...+.++- + .+.+...+..... .++.+++..+++|...--|.+....
T Consensus 64 llRl~~g~l~drfGgR~~~~~s~~l~----~--IP~~~~~~a~~~~----~~~~ll~~gll~G~~GasFav~m~~----- 128 (417)
T COG2223 64 LLRLPYGFLTDRFGGRKWTILSMLLL----L--IPCLGLAFAVTYP----STWQLLVIGLLLGLAGASFAVGMPN----- 128 (417)
T ss_pred HHHHHHHhhhcccCchHHHHHHHHHH----H--HHHHHHHHHccCC----chHHHHHHHHHHhcccceehccccc-----
Confidence 44567899999998888765553311 1 1211222222211 1256777788899888777776543
Q ss_pred ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHh-hhccccccc
Q 015174 91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFT-NKISSGVLD 169 (412)
Q Consensus 91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~-~~~~~~~l~ 169 (412)
+..-++++++......|+.=+.--.++++++|.+....-.. .|+.+..+-...-++ ..+..+.. +..||.
T Consensus 129 -~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~-~w~~~~~i~~~~l~v----~~v~~~~~~~d~p~~--- 199 (417)
T COG2223 129 -ASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFL-AWRNVAGIYVVALAI----AAVLAWLGMNDVPEH--- 199 (417)
T ss_pred -ccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHH----HHHHHHHHhCCChhh---
Confidence 22246655443556667633444567789999987654321 266654432222222 12222222 233321
Q ss_pred cccccccccCCCCCCCCCCchhhhHHhHHHHH-HhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHH-hcCCCCc
Q 015174 170 RAKCSQSCCRTSNEGPVPDADNIVDVGIEAIK-LGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPS 246 (412)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~ 246 (412)
|++.. +.. +-++..++||..+- ++.+...|=. --++.....-|++ +.|+++.
T Consensus 200 r~~~~------------------------~~~~~~~~~v~~~~~~W~lsllY~~tFG~-Fvgfs~~l~~~~~~~fg~~~~ 254 (417)
T COG2223 200 RASVK------------------------PQLPAQLKAVFSNKDTWLLSLLYFATFGG-FVGFSAYLPMYLVTQFGLSPV 254 (417)
T ss_pred hcccc------------------------ccchhHHHHHhcCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCChh
Confidence 11110 001 34555676665554 3333333311 1234455666665 6899999
Q ss_pred hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CC---CcCcchHHHHHHHHHHhhhhh
Q 015174 247 IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GS---LSQQNPLLFFLCLIVLSRLGH 322 (412)
Q Consensus 247 ~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~---~~~~~~~~l~~~g~~~sr~GL 322 (412)
.-|..-..+..-+.+.=-+.+++..|+|-.|..++......++ ..+....+ +. ++.......++.-.+ ..|+
T Consensus 255 ~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~l~l~~--~~G~ 330 (417)
T COG2223 255 TAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALA--AALLSLFLTGFGHGGSFVVFVAVFLALFV--FAGL 330 (417)
T ss_pred hHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHH--HHHHHccccccccCcchHHHHHHHHHHHH--Hhcc
Confidence 9998777777777777788899999999999988765532222 21122221 00 111111111111111 1122
Q ss_pred hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH-HHHH-HhccCCCchhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM-LGVA-IIANDVSHFGFLATLSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~-~~~~-~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~~~~ 397 (412)
.+..+.-+-+.+.+++.|.|+|..++.-..-+... ...+ ...+.++.....++.....+.+..+++..|.|+
T Consensus 331 ---GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 331 ---GNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ---CcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12222222233466799999999988877532222 2222 333444566666666766677777777777555
No 105
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.53 E-value=2.3e-05 Score=81.09 Aligned_cols=307 Identities=16% Similarity=0.158 Sum_probs=165.7
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALG 84 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~ 84 (412)
.++.++-.+..|.|.||+.||..+....+....- .+...+.. .|++. .-+.|.....++..
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~------~~~~~~~~----------~~~~~~~~l~g~~~~~~s~~-- 133 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILP------ALCLLFQG----------YWFFLLLGLSGGFSAIFSVG-- 133 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHh------HHHHHHHH----------HHHhhhcccccchhhhhhhh--
Confidence 5677888999999999999999877664422111 11111111 12221 11233333333332
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS 164 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~ 164 (412)
-+..-| ++.++ +....-..+...-..+-.++|.++|.+....|....+.+.......+. ......+|
T Consensus 134 ~a~vad----is~~~---~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~------~y~~~~l~ 200 (463)
T KOG2816|consen 134 FAYVAD----ISSEE---ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSL------LYMLLFLP 200 (463)
T ss_pred hhheee----ccchh---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHH------HHHhhccc
Confidence 222334 55542 456666666666777889999999999999887666554333333333 22223455
Q ss_pred ccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHh---cCCcchHHH-HHHHHHHHhhhccchHHHHHHHh
Q 015174 165 SGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYM---QQPVLPASL-AYVLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~~~v~~~~~-~~a~l~~t~v~~~~~~~~~y~~~ 240 (412)
|. ++.+++.+.++++.+. .. ....+..+-++.+. .+|..+... ..-+++.....+.....+.|++.
T Consensus 201 Es-l~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~ 270 (463)
T KOG2816|consen 201 ES-LQEKERSDATLRELTP-GS--------LDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKA 270 (463)
T ss_pred cc-cCccccccccccccCC-Cc--------ccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEee
Confidence 52 2211111011111110 00 01112223333332 334443322 22222222111111123667774
Q ss_pred -cCCCCchhHHHhhHHHHHHHHHHHH-HHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015174 241 -RGLNPSIIGGFSGLCASMGVAATFL-SAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 318 (412)
Q Consensus 241 -~gls~~~~G~~~~~~avggllGt~l-~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s 318 (412)
.|.++..++.+.+.....+..+.++ .|.+.+.+|.++....|+..+.+....- .+..... ..+..+++.+
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~--af~~~~w------~~~~~~v~~~ 342 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLF--AFATETW------MMFAAGVVVA 342 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHH--HHhccch------hhhHHHHHHH
Confidence 7999999998888877777777654 5588899999998777877665443221 2222211 1121222222
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
-.+. ...+.....-..++++++|.+.+...-++.+.+.+...+
T Consensus 343 ~~~~--~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~ 385 (463)
T KOG2816|consen 343 LAGI--VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPAL 385 (463)
T ss_pred hhcc--hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHH
Confidence 2222 446677777888899999999999988888876666555
No 106
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.48 E-value=4.9e-05 Score=78.26 Aligned_cols=347 Identities=17% Similarity=0.142 Sum_probs=178.3
Q ss_pred hhHHHHHHhhhhhcchhccCC-----cHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHH
Q 015174 4 FSKLILIVGGPLVGKLMDHSP-----RIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERL 78 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~-----R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l 78 (412)
..++||.+ -|+.|.+.|..| ||+=|..+-+...++ +.. .........+ . ....+..++......+
T Consensus 33 ~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~----~~~-~~~~~~~~~s---~-~~~~~~l~la~~g~a~ 102 (433)
T PF03092_consen 33 LASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVS----ALV-LALLPASESS---A-AIAVVLLFLASFGYAF 102 (433)
T ss_pred HHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHH----HHH-HHhcccccch---h-hhHHHHHHHHHHHHHH
Confidence 45678876 899999999996 444466665544222 111 1111111111 1 1122223334444555
Q ss_pred HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~ 158 (412)
.|++...-+.+ ...++ ++.-.+..|.......+..++|-.++|.+....+++..|.+.+....+.....+
T Consensus 103 ~DV~aDa~vvE-----~~~~~-p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~---- 172 (433)
T PF03092_consen 103 ADVAADALVVE-----LARRE-PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL---- 172 (433)
T ss_pred HHHhhhHHHHH-----HhhcC-CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH----
Confidence 66655432222 23333 223567788888889999999999999999999988877554333333322111
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchH-HHHH
Q 015174 159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSL-MTAF 237 (412)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~-~~~y 237 (412)
.-.+| ...+++......++ + ..+. ......+.+.+-|+.+-+..++++.+.+-.++.. ....+.- .+-|
T Consensus 173 --~~~~e-~~~~~~~~~~~~~~-~--~~~~---~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~-~~~~~~a~~fy~ 242 (433)
T PF03092_consen 173 --FLLEE-RKVRPADEVFSFGK-E--EVPC---LFGSFREQLSELWRALQQRAIWQPILFFIFFFNL-PPSISSASSFYF 242 (433)
T ss_pred --Hhhhh-ccccccchhhcccc-c--ccch---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh-ccCCCCccEEEE
Confidence 11121 11111000000000 0 0000 0011233444455544443455554422222211 1222211 2222
Q ss_pred H-HhcC---CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH--Hh---cCCCcCcchH
Q 015174 238 L-TQRG---LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV--YW---SGSLSQQNPL 308 (412)
Q Consensus 238 ~-~~~g---ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~--~~---~g~~~~~~~~ 308 (412)
. ...+ +++..+|.+...++++.++|..++.+..++..-++...+.........+.-+.. -+ .|-+..+...
T Consensus 243 ~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 243 QTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred EeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 2 3466 999999999999999999999999999999988777665543221111100000 00 1110000000
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc--------cCCCchhHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA--------NDVSHFGFLATLS 380 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~--------~~~~~f~~l~~~s 380 (412)
.--...-+..++.. +....+.-|.+|+..-|++.|+..+..|+....+..++..+ .+-+..++++++.
T Consensus 323 gd~~l~~~~~~i~~----mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~ 398 (433)
T PF03092_consen 323 GDTILEEVIGMIAF----MPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILIC 398 (433)
T ss_pred EhHHHHHHHHHHHH----HHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence 00001112223333 45556677788999999999999999998766666554333 2334466666665
Q ss_pred HHHH
Q 015174 381 LLSV 384 (412)
Q Consensus 381 ~~~v 384 (412)
...-
T Consensus 399 ~~~~ 402 (433)
T PF03092_consen 399 SVIQ 402 (433)
T ss_pred HHHH
Confidence 5444
No 107
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.41 E-value=2.2e-05 Score=76.57 Aligned_cols=134 Identities=16% Similarity=0.081 Sum_probs=97.1
Q ss_pred HH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015174 237 FL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 237 y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~ 315 (412)
++ +++|.|+.++|++.+...++..+++...+++.+|+|++|....+.....+....+ .+.. + .. .+..+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~--~~~~~~ 92 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL--AFAS-N----FW--LLLIAR 92 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH--HHHC-C----HH--HHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh--hhhh-h----HH--HHhhhc
Confidence 44 4689999999999999999999999999999999999998887776554442222 1212 1 12 122233
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL 379 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~ 379 (412)
++.++|.-..+.+...+..+..|+++|+++++...+.......+...++....+.-.+.....+
T Consensus 93 ~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~ 156 (352)
T PF07690_consen 93 FLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLI 156 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHH
T ss_pred cccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcccccccccc
Confidence 3445554457788889999999999999999999999998777777777766644444433333
No 108
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.40 E-value=1.1e-05 Score=82.05 Aligned_cols=159 Identities=8% Similarity=-0.113 Sum_probs=99.0
Q ss_pred HhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015174 202 LGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 281 (412)
Q Consensus 202 ~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~ 281 (412)
..++...+||.++..+....++...........+.|.++.+.|+.+.|+..+...++.++++...+++.+|+|++|....
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45666678888887555444442101112234555667788899999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015174 282 GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 361 (412)
Q Consensus 282 ~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~ 361 (412)
+.....+..............+ ... +....++.+++-.....+.....++.+|+++|+++++......+....+..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~--~~~--l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPS--LLA--IYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCc--HHH--HHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 6544333222211111111111 111 111222222222224456677888999999999999998877776555544
Q ss_pred HHH
Q 015174 362 GVA 364 (412)
Q Consensus 362 ~~~ 364 (412)
.++
T Consensus 164 ~l~ 166 (417)
T PRK10489 164 ALG 166 (417)
T ss_pred HHH
Confidence 444
No 109
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.37 E-value=3.1e-05 Score=76.92 Aligned_cols=126 Identities=15% Similarity=0.053 Sum_probs=88.5
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
..+.+.+++|+|+.+.|+..+...++...+..+.+++.+|+|++|....+.....+..... .... + ...+.
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~------~~~~~ 97 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL--ALSN-N------IETLL 97 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHc-c------HHHHH
Confidence 3445667899999999999999999999999999999999999998877654332222211 2211 1 11111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.+.++.+++.-..+.....+.+|..|+++||++.+..++.......+...++...
T Consensus 98 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 152 (385)
T TIGR00710 98 VLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI 152 (385)
T ss_pred HHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223334444446677788889999999999999999998887665555554443
No 110
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.34 E-value=1.1e-05 Score=79.51 Aligned_cols=133 Identities=14% Similarity=0.026 Sum_probs=90.3
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|+|+.++|++.+...++..++....+++.+|+|++|...++.....+....+ .+.. + ... +..
T Consensus 17 ~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~--~~~ 87 (399)
T TIGR00893 17 APMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQ--AFAG-A----YVS--LYI 87 (399)
T ss_pred HHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHH--HHHc-C----HHH--HHH
Confidence 333456789999999999999999999999999999999999998877665432222221 2221 1 111 111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGF 375 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~ 375 (412)
+.++.++|.-....+...+..|..|+++||++++...+.++...++...+.....+...+.+
T Consensus 88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 149 (399)
T TIGR00893 88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQW 149 (399)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchH
Confidence 22223334334566777888899999999999999999988876666666554333333333
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.34 E-value=0.0026 Score=66.59 Aligned_cols=118 Identities=14% Similarity=0.026 Sum_probs=66.7
Q ss_pred HHHHHhhhhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~-~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
+...+..+..|.+.||+ +|||++....+...+. .. ........ . ..+++...+.....-++. ++..
T Consensus 56 ~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg----~l--ll~~~~~~-----~-~~~~l~l~li~iG~G~~~-~~~~ 122 (493)
T PRK15462 56 SLVYVTPILGGFLADKVLGNRMAVMLGALLMAIG----HV--VLGASEIH-----P-SFLYLSLAIIVCGYGLFK-SNVS 122 (493)
T ss_pred HHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHH----HH--HHHHhhcc-----h-hHHHHHHHHHHHhccccc-ccHH
Confidence 34455677899999999 9999987776644332 11 11111100 0 112211111111111111 2222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFA 142 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~ 142 (412)
++..| +++++++ +..+..+..-....+...++|.++|.+.+..||+.+|...
T Consensus 123 alv~e----lfp~~~~-~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~ia 174 (493)
T PRK15462 123 CLLGE----LYEPTDP-RRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLA 174 (493)
T ss_pred HHHHH----HCCCCCc-cccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHH
Confidence 33334 6665322 4555666666666688999999999999989999988653
No 112
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.31 E-value=3.5e-05 Score=75.46 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=91.3
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
..+.|..+.+.++.++|++.+...++.+++....+++.+|+|++|...++......+..........+.. ....+.
T Consensus 21 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 96 (365)
T TIGR00900 21 ALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGL----NIWQVY 96 (365)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCC----cHHHHH
Confidence 3566888899999999999999999999999999999999999998887765433222221111111110 111111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN 368 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~ 368 (412)
.+..+.+++.-.++.+...+..+.+|+++|+++++..++.......+...++....
T Consensus 97 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 97 VLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 22222333443466777888889999999999999999998886666666655443
No 113
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.28 E-value=2.7e-05 Score=77.45 Aligned_cols=128 Identities=8% Similarity=-0.004 Sum_probs=89.9
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
..+.|.+++|+|+.+.|+..+...++..++....+++.+|+|+++...++......+...+ .+.. . .....
T Consensus 13 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~--~~~~-~---~~~~~--- 83 (377)
T PRK11102 13 ALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVAC--ALAQ-T---IDQLI--- 83 (377)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHH--HHHc-c---HHHHH---
Confidence 3667778899999999999999999999999999999999999998887766544333322 2111 1 01111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.+.++.+++.-..+.....+.++..|+++||++.+...........+...+.....+
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112222333334566777888888999999999999988887766666655544433
No 114
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.28 E-value=0.00017 Score=75.24 Aligned_cols=235 Identities=17% Similarity=0.063 Sum_probs=144.3
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+-++.++++-.+.|.+.||.|=.+.|..+.+.-.....+.+ . .. ..+.+.++=+++|.+|...-.+.
T Consensus 89 ~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~------~-~~------s~~~~ialr~llGl~es~~wP~~ 155 (495)
T KOG2533|consen 89 VFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTA------A-VH------SFPGLIALRFLLGLFESGGWPGV 155 (495)
T ss_pred HHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHH------H-Hh------hhHHHHHHHHHHHHHhcccchHH
Confidence 34678899999999999999966666666543222111111 1 11 11234444567888887766665
Q ss_pred hhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------hhcChhHHHHHHHHHHHHHHHHHHHHH
Q 015174 84 GVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILL------SKYEPVTCLKFAAGLIMWSLPVMIILT 157 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~------~~~~~~~~~~~~~~~~~~s~~~~~~~l 157 (412)
..-+.+ -++++ ++....+..-.-.++++++|.++...+. ...||+..|++.. ++++...++
T Consensus 156 ~~~lg~-----wy~~~---e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G---~i~~~~gi~-- 222 (495)
T KOG2533|consen 156 VAILGN-----WYGKS---ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEG---VITLVLGIV-- 222 (495)
T ss_pred HHHHHh-----hcChh---hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHH---HHHHHHHhe--
Confidence 443332 36654 7888889999999999999999998873 4678999887643 444433222
Q ss_pred HHhhhcccccccccccccccc------CCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhcc
Q 015174 158 WFTNKISSGVLDRAKCSQSCC------RTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTP 230 (412)
Q Consensus 158 ~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~ 230 (412)
....+|+ .|.+.+-.++.+ +.+++++... .+ . + -..+++..+++|..++ ++...+.... --++
T Consensus 223 -~f~~lp~-~P~~~~fl~~~ek~~~~~~~~~~~~~~~-~~---~-~--~~~~~~~a~~dp~vw~~~l~~~~~~lv-~~~~ 292 (495)
T KOG2533|consen 223 -VFFFLPD-NPSKAWFLTDEEKELVVERLRESPSGGI-EN---K-F--KWKGFKEALKDPGVWPFSLCYFFLKLV-NYGF 292 (495)
T ss_pred -EEEEecC-ChhhccccchHHHHHHHHHHHhccCCCc-cc---c-c--CHHHHHHHHhchhHHHHHHHHHHHhhc-cccH
Confidence 1123332 111000000000 0000000000 00 0 1 1246777888998877 4444444432 2335
Q ss_pred chHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhc
Q 015174 231 GSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG 274 (412)
Q Consensus 231 ~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g 274 (412)
.+..+.|+++ .|+|+.+-..+-....++|++|+++++.+..|++
T Consensus 293 ~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 293 SYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 6678888987 6899999999999999999999999999999975
No 115
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.25 E-value=0.001 Score=70.83 Aligned_cols=109 Identities=16% Similarity=0.101 Sum_probs=65.5
Q ss_pred hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH-HHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015174 247 IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA-GLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY 325 (412)
Q Consensus 247 ~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~-~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~ 325 (412)
..|+.-...+++...|..+.+.+.+++++.|-.++ +..++..+.. +....-+.... ..-.+.++.| +|.-..
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~G-ama~~~~~n~~-~~i~~~~l~g-----~giG~~ 422 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCG-AMAAVRPDNKN-AAIAFLVLAG-----FGIGGI 422 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHH-HHHHccCCCcc-hHHHHHHHHH-----HhHHHH
Confidence 46666677788888888999999999988876643 3333322111 11111121111 1112222333 333234
Q ss_pred hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH
Q 015174 326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG 362 (412)
Q Consensus 326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~ 362 (412)
.+......|-.+|+++.|.++|+..+.....+.+.+.
T Consensus 423 ~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 423 LVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYA 459 (599)
T ss_pred HHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHH
Confidence 4555667788999999999999999998875554443
No 116
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.24 E-value=0.00027 Score=70.04 Aligned_cols=229 Identities=15% Similarity=0.060 Sum_probs=118.3
Q ss_pred hhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhh
Q 015174 4 FSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVAL 83 (412)
Q Consensus 4 ~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~ 83 (412)
+..++.+++|+++|.+.||++|||..+..-+.. +++|. .+..+ ..+.+++-=++.|....+...+.
T Consensus 77 ~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily----~~scl-----~k~~~-----~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 77 AGFASSAIFGTFVGSLADRYGRKKACLLFCILY----SLSCL-----TKHSS-----NYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH----HHHHH-----HHhcc-----ccHHHHHHHHHHHHHHHHHHHHH
Confidence 356778999999999999999999866554433 44453 12221 11223333334444443333322
Q ss_pred hhhhcccceeeecCCC--chhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhcC--hhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 84 GVAVERDWAVLLAGIN--RPIALAKANAVLN-RIDLLCEIAGASLFGILLSKYE--PVTCLKFAAGLIMWSLPVMIILTW 158 (412)
Q Consensus 84 ~~ai~RDwv~~l~~~~--~~~~L~~~Ns~l~-~id~v~~llgP~lgG~L~~~~~--~~~~~~~~~~~~~~s~~~~~~~l~ 158 (412)
| +|.+.=.++. +++.|.+.-+.+. ..+.+.-+++-.++-.+....+ +...|.......+++. .
T Consensus 143 ----E-sW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~-------~ 210 (354)
T PF05631_consen 143 ----E-SWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAA-------V 210 (354)
T ss_pred ----H-HHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHH-------H
Confidence 2 2543333211 1235666666565 4455566666666666666543 3444432111112111 1
Q ss_pred HhhhccccccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH
Q 015174 159 FTNKISSGVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL 238 (412)
Q Consensus 159 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~ 238 (412)
.+.+.+++....+. + + ....++.+++++...+||.....-..-.+| ++.+.+|.
T Consensus 211 ~I~~~W~ENyg~~~---------------~-~---~~~~~~~~~a~~~i~~d~ril~LG~~qslF-------E~smy~FV 264 (354)
T PF05631_consen 211 LILKTWPENYGDTS---------------S-S---SSLSGSFREAWRAILSDPRILLLGLIQSLF-------EGSMYLFV 264 (354)
T ss_pred HHHhcccccCCCcc---------------c-c---cchHHHHHHHHHHHHcCchhHHHHHHHHHH-------HHHHHHhe
Confidence 12222221111000 0 0 123456778999999988766522222233 11133321
Q ss_pred ---H-hcC--CCCchhHHHhhHHHHHHHHHHHHHHHHHH-HhchhhHHHHHHH
Q 015174 239 ---T-QRG--LNPSIIGGFSGLCASMGVAATFLSAYLVR-RLGILKAGAAGLI 284 (412)
Q Consensus 239 ---~-~~g--ls~~~~G~~~~~~avggllGt~l~~~l~~-R~g~~r~~~~~~~ 284 (412)
+ .+. =.+.-+|++++.--+..++|+.+++++.. +....+.+.....
T Consensus 265 flWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~~~~e~~l~~v~~ 317 (354)
T PF05631_consen 265 FLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKSLRPESLLRYVFA 317 (354)
T ss_pred eeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 1 111 12334999999999999999999987654 4444444443333
No 117
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.21 E-value=7.8e-05 Score=76.36 Aligned_cols=128 Identities=17% Similarity=0.046 Sum_probs=85.9
Q ss_pred ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
.++.....+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....++.... .... + ....
T Consensus 41 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~---~~~l 114 (434)
T PRK11663 41 SFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF--GFSS-S---LWAF 114 (434)
T ss_pred hHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH--HHHh-H---HHHH
Confidence 34455666777899999999999999999999999999999999999998877665433222211 2111 1 1111
Q ss_pred H--HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 309 L--FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 309 ~--l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
+ .++.|+. .|. .-.+...+.++..|+++||++.|..++.++....+...+....
T Consensus 115 ~~~~~l~g~~---~g~--~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 115 ALLWVLNAFF---QGW--GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHHHHHHHH---HHc--cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1112221 122 2245567788888999999999999999887666555544333
No 118
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.20 E-value=9.1e-05 Score=74.62 Aligned_cols=134 Identities=9% Similarity=0.004 Sum_probs=89.9
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|+|+.+.|+..+...++.++++...+++.+|+|++|....+.....++...+ .+.. + ...++ .
T Consensus 38 ~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~~~--~ 108 (406)
T PRK11551 38 APRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLAT--AQAW-D----FPSLL--V 108 (406)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHH--HHhc-c----HHHHH--H
Confidence 444556799999999999999999999999999999999999999887765433222211 2221 1 11111 1
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL 376 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l 376 (412)
+.++.+++.-........+.+|..|+++||++++...........+...+.....+...+...
T Consensus 109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 171 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHI 171 (406)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHH
Confidence 122223332223445667788888999999999999988877666666666555554444433
No 119
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.20 E-value=0.00016 Score=73.11 Aligned_cols=126 Identities=16% Similarity=0.120 Sum_probs=81.3
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
...|.+++|+|+.+.|+..+...++..+++...+++.+|+|++|...++......+...... ......+ ...++.
T Consensus 36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~-~~~~~~~--~~~l~~-- 110 (402)
T TIGR00897 36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIV-FGLGHAN--YPLILL-- 110 (402)
T ss_pred HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HhccCcc--HHHHHH--
Confidence 45577789999999999999999999999999999999999999988776644333222111 1111101 111111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHH-HHHHHHH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVE-SVMLGVA 364 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~-ll~~~~~ 364 (412)
.-...++|.-...........+..|+++||+++|...+.++... .....+.
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~ 162 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS 162 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112333322333444556677899999999999998877643 3344443
No 120
>TIGR00895 2A0115 benzoate transport.
Probab=98.19 E-value=5.8e-05 Score=74.87 Aligned_cols=125 Identities=13% Similarity=0.005 Sum_probs=86.7
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|.|+.+.|++.+...++.+++..+.+++.+|+|+++...++.....++.... .+ ..+ ... +..
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~--~~-~~~----~~~--~~~ 110 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLC--AL-ATN----VTQ--LLI 110 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHH--HH-ccc----hHH--HHH
Confidence 344456789999999999999999999999999999999999988887765433322221 21 111 111 111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
+.++.+++.-........+..+..|+++||++++...+.+.....+...+....
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 222333444345667778888889999999999999988887666555554333
No 121
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.18 E-value=0.00012 Score=73.43 Aligned_cols=130 Identities=16% Similarity=0.045 Sum_probs=84.9
Q ss_pred chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
.+..+.+.+++|+|+++.|+..+...++.+.+....+++.+|+|++|....+.....+....+ .+.+ + ....++
T Consensus 23 ~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~--~~~~-~---~~~l~~ 96 (382)
T PRK10091 23 MGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMF--TLSS-S---YLMLAI 96 (382)
T ss_pred HhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH--HHhC-c---HHHHHH
Confidence 344666777899999999999999999999999999999999999999887765433222221 2222 1 111111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+-++.+++.-..-.....+.++..|+++|+++.+...+.+.....+...++....+
T Consensus 97 ---~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 97 ---GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred ---HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 11222222211223445567788899999999998887777655554444444443
No 122
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.17 E-value=0.00011 Score=74.40 Aligned_cols=126 Identities=14% Similarity=0.091 Sum_probs=87.3
Q ss_pred HHHHH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 234 MTAFL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 234 ~~~y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
...|. +++|.|+..+|+..+...+.......+.+++.+|+|+++...++.....+....+ . ...+ ...+++
T Consensus 33 ~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~--~-~~~~---~~~l~~-- 104 (400)
T PRK11646 33 ISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM--A-IAHE---PWLLWL-- 104 (400)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH--H-Hhcc---HHHHHH--
Confidence 44455 5689999999999999999999999999999999999999887766543332222 1 1111 111111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN 368 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~ 368 (412)
+.++.+++--.++.+...+.++.+|+++||+++|..++.++....+...++....
T Consensus 105 -~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 105 -SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122222332356677788889999999999999999999886666655554443
No 123
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.17 E-value=2e-05 Score=77.51 Aligned_cols=123 Identities=11% Similarity=-0.058 Sum_probs=85.2
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
+....+.+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....++.... .+.. + ..
T Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~-- 84 (379)
T TIGR00881 14 FALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF--GFST-S----LW-- 84 (379)
T ss_pred hhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH--HHhh-h----HH--
Confidence 3333444456789999999999999999999999999999999999998887765433322221 2211 1 11
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 361 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~ 361 (412)
.+..+.++.+++.-........+..+..|+++||++.+..++.+.....+..
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 85 VMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred HHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHH
Confidence 1111222223333335566777888999999999999999888887665555
No 124
>PRK12382 putative transporter; Provisional
Probab=98.16 E-value=0.0001 Score=74.05 Aligned_cols=134 Identities=7% Similarity=0.001 Sum_probs=85.2
Q ss_pred hHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcchHH
Q 015174 232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNPLL 309 (412)
Q Consensus 232 ~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~~~ 309 (412)
...+.|+. ++|+|+.++|++.+...++..++....+++.+|+|++|....+............. ...+.. ......
T Consensus 36 p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 113 (392)
T PRK12382 36 PVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVS--APFKFA 113 (392)
T ss_pred hhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccc--hhHHHH
Confidence 34556764 68999999999999999999999999999999999999888776533222111111 111110 001111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.+..+-.+.++|--.+..+.....++.+|+++||++.+..+...++...+...++...
T Consensus 114 ~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l 171 (392)
T PRK12382 114 LLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLL 171 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1212222233333223445556777889999999999998777766555555554443
No 125
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.15 E-value=0.00017 Score=72.35 Aligned_cols=128 Identities=9% Similarity=0.029 Sum_probs=85.5
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|.|+.+.|+..+...++...+....+++.+|+|++|....+.....+.... .....+ .... ..
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~---~~~~~~---~~~~---~~ 96 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL---CSLAET---SSLF---LA 96 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH---HHHhCc---HHHH---HH
Confidence 33445679999999999999999999999999999999999998887665432222111 111111 1111 11
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV 370 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~ 370 (412)
+-++.+++.-........+..+..|+++|+++.+..+...+....+...++....+.
T Consensus 97 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~ 153 (392)
T PRK10473 97 GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK 153 (392)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 212223333234555667777888999999999999988877666666665554433
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.15 E-value=5.1e-05 Score=76.32 Aligned_cols=131 Identities=12% Similarity=-0.031 Sum_probs=86.3
Q ss_pred HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
..+.|++ ++|.|+.++|+..++..++..++....+++.+|+|++|+...+..........+......+... ......+
T Consensus 37 ~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l 115 (399)
T PRK05122 37 VLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWP-VLSLLLL 115 (399)
T ss_pred HHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccc-hhHHHHH
Confidence 4556665 5899999999999999999999999999999999999998887654333222222221111100 1111122
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
..+-++.++|.-..+.+......+.+|+++||++++..+...++...+...++
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 22222333444345666677778888999999999998777776554444443
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.12 E-value=0.0002 Score=71.88 Aligned_cols=131 Identities=15% Similarity=0.050 Sum_probs=85.6
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
.....+.|.+++|.|+.++|+..+...++..+++...+++.+|+|++|....+..........+ .. .++ ...+
T Consensus 25 ~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~--~~-~~~----~~~l 97 (381)
T PRK03633 25 LNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGL--GL-MVG----FWSW 97 (381)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-hcc----HHHH
Confidence 3456777888999999999999999999999999999999999999998877665432221111 21 111 1111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+ .+-++.+++.-..-........+..|+++||++.+...+..+....+...++....+
T Consensus 98 ~--~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~ 155 (381)
T PRK03633 98 L--AWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVST 155 (381)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 1 111222222211222333444566788899999999888887766666666555443
No 128
>PRK10054 putative transporter; Provisional
Probab=98.11 E-value=0.00021 Score=72.40 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=85.4
Q ss_pred HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
.+..|++ ++|+|+.+.|+..+...++++++....+++.+|+|+++...++.....+..+. ..+.+ + ....+.
T Consensus 29 ~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~--~~~~~-~----~~~~~~ 101 (395)
T PRK10054 29 FMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIA--IPLVN-N----VTLVVL 101 (395)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH--HHHHh-H----HHHHHH
Confidence 4566775 58999999999999999999999999999999999998887766543222111 12221 1 111111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
...+. ..+...+..+......+.+|+++||++.|..++..+....+...++...
T Consensus 102 ~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 102 FFALI--NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 1122235556677778888999999999999999888666555555444
No 129
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.11 E-value=0.00012 Score=75.51 Aligned_cols=128 Identities=9% Similarity=-0.055 Sum_probs=89.7
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|.++...|+..+...++.+++..+.+++.+|+|++|...++.....+....+ .... + .. .+..
T Consensus 25 ~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~--~l~~ 95 (485)
T TIGR00711 25 IPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLC--GVAP-N----LE--LMII 95 (485)
T ss_pred HHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHH--hCcC-C----HH--HHHH
Confidence 445566799999999999999999999999999999999999998887765433222221 1111 1 11 1112
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV 370 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~ 370 (412)
+-+..++|.-........+..+..|+++||++.+...+.......+...++....+.
T Consensus 96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 333334444345667778888999999999999999888887666666665555443
No 130
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.02 E-value=0.00017 Score=73.38 Aligned_cols=117 Identities=13% Similarity=0.086 Sum_probs=79.0
Q ss_pred HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015174 239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 318 (412)
Q Consensus 239 ~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s 318 (412)
+++|+++.++|+..+...++..++.+..+++.+|+|++|....+.....+....+ .+..+. ..+++ +-++.
T Consensus 36 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~--~~~~~~----~~l~~---~r~l~ 106 (412)
T TIGR02332 36 KDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT--MFATGP----ESLYL---LRILV 106 (412)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH--HHhcCH----HHHHH---HHHHH
Confidence 5789999999999999999999999999999999999998877665433222221 222211 11111 11112
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
++|.-.+-.+...+.+|..|+++||++.+...+.......+...++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233223345556789999999999999999887776554444443
No 131
>PRK03545 putative arabinose transporter; Provisional
Probab=98.02 E-value=0.00024 Score=71.46 Aligned_cols=125 Identities=10% Similarity=0.005 Sum_probs=83.0
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
...+.+++|+|+.+.|+..+...++..++....+++.+|+|++|....+.....+....+ .+.+ + ....++
T Consensus 32 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~---~~~l~~--- 102 (390)
T PRK03545 32 LSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS--ALAW-N---FTVLLI--- 102 (390)
T ss_pred hHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH--HHhc-c---HHHHHH---
Confidence 345567899999999999999999999999999999999999998887765322222221 2211 1 111111
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
+-++.+++--.+......+..+..|+++||++.|..+..+.....+...++...
T Consensus 103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 111122222123344556667788999999999999888887666655555443
No 132
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.01 E-value=0.0003 Score=71.75 Aligned_cols=125 Identities=12% Similarity=-0.030 Sum_probs=89.5
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
+.+.+.++.|+|+.+.|++.+...++.++++...+++.+|+|++|+...+.....+...... ..... .....+.
T Consensus 25 l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~-~~~~~-----~~~~~~l 98 (410)
T TIGR00885 25 MVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFW-PAAEI-----MNYTLFL 98 (410)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHhh-----ccHHHHH
Confidence 44445567899999999999999999999999999999999999998888764333222211 11100 1122233
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
.+.+..+.|.-..+.+.+...++..|++++++..+..++.++.-..+...+
T Consensus 99 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i 149 (410)
T TIGR00885 99 VGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVV 149 (410)
T ss_pred HHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445666666888888888888899999999999888888755555444
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.01 E-value=0.00032 Score=69.88 Aligned_cols=124 Identities=10% Similarity=-0.011 Sum_probs=83.5
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|+|+.+.|++.+...++..++....+++.+|+|+++...++.....+....+ .+.. + ...++ .
T Consensus 35 ~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~--~ 105 (405)
T TIGR00891 35 LAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLAC--GFAP-G----YITMF--I 105 (405)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHhc-c----HHHHH--H
Confidence 444556799999999999999999999999999999999999998887654332222211 2211 1 11111 1
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII 366 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~ 366 (412)
+-++.++|.-..+.....+.-|..|+++||++++..++.......+...+...
T Consensus 106 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~ 158 (405)
T TIGR00891 106 ARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSL 158 (405)
T ss_pred HHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222334333556666777788899999999999988877655555544433
No 134
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.01 E-value=0.00049 Score=69.11 Aligned_cols=127 Identities=7% Similarity=-0.025 Sum_probs=81.0
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
.+.+.+++|+|+.+.|+..+...++..++....+++.+|+|++|....+.....+....+ .+.+ + ...++ .
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~--~ 101 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVA--LFAH-S----LTVLI--A 101 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH--HHHc-c----HHHHH--H
Confidence 455667899999999999999999999999999999999999998877655433222221 2211 1 11111 1
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+-+..+++.-........+..+..+++++++.++..+.-......+...+.....+
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 157 (394)
T PRK11652 102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT 157 (394)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111222212233344455566788899999998877777666665555544433
No 135
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.00 E-value=0.00041 Score=67.18 Aligned_cols=132 Identities=15% Similarity=0.070 Sum_probs=94.1
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
.....+.|.+++|.++.+.|+..+...++.+.+....+++.+|+|++|...++........... .. ..+ . .
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~--~~-~~~----~--~ 88 (352)
T cd06174 18 LSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLL--AF-ASS----L--W 88 (352)
T ss_pred hHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHH--HH-hcc----H--H
Confidence 3445667788899999999999999999999999999999999999998777766443332222 11 111 1 1
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV 370 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~ 370 (412)
.+..+..+.+++.-........+..+..|+++|+++++...........+.........+.
T Consensus 89 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 149 (352)
T cd06174 89 LLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAES 149 (352)
T ss_pred HHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112223334444446677888899999999999999999988888766666665555443
No 136
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.99 E-value=0.00022 Score=59.36 Aligned_cols=121 Identities=19% Similarity=0.110 Sum_probs=77.6
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+..++.++..|.+.||++||+.+..+......... ...... + . +..++..++.|............
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~------~~~~~~-~-----~-~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTA------MFALSS-N-----I-TVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHH------HHHHhc-c-----H-HHHHHHHHHHHHHHHHHHHhHHH
Confidence 456778899999999999999998777554332211 111111 1 1 22333344455444433333222
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIM 147 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~ 147 (412)
...| .++++ +..+.++..+....++..++|.++|.+.+..+|+..+.+......
T Consensus 75 -~~~~----~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (141)
T TIGR00880 75 -LIAD----IYPPE---ERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILAL 128 (141)
T ss_pred -HHHH----HCChh---hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHH
Confidence 2223 55543 688999999999999999999999999998898877665443333
No 137
>PRK10504 putative transporter; Provisional
Probab=97.99 E-value=0.00045 Score=71.17 Aligned_cols=130 Identities=11% Similarity=-0.007 Sum_probs=85.2
Q ss_pred chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
....+.|.+++|.|+...|+..+...++...+..+.+++.+|+|++|....+......+...+ .+.. + ...++
T Consensus 30 ~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~l~ 102 (471)
T PRK10504 30 NTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFC--ALSG-T----LNELL 102 (471)
T ss_pred HHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH--HHhC-C----HHHHH
Confidence 344667778899999999999999999999999999999999999998876654332222221 2111 1 11111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.+.++.++|.-..-.......++..|+++||++.|..+...+....+...++....+
T Consensus 103 --~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~ 159 (471)
T PRK10504 103 --LARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE 159 (471)
T ss_pred --HHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 112222333222223445556778899999999999998888766555555544433
No 138
>PRK03699 putative transporter; Provisional
Probab=97.98 E-value=0.00048 Score=69.47 Aligned_cols=126 Identities=14% Similarity=0.094 Sum_probs=79.7
Q ss_pred ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
.++...+.+.+++|+|+++.|+..+...++..+|..+.+++.+|+|++|...++.....+..... .+.. +.. ....
T Consensus 25 ~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~--~~~~-~~~-~~~~ 100 (394)
T PRK03699 25 VTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGL--MFSH-SLA-LFSI 100 (394)
T ss_pred HHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH--HHcc-hHH-HHHH
Confidence 34445666677899999999999999999999999999999999999998877765432222211 2211 100 0011
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
..++.|+. .|. ..........+..|+++||+..+..++.......+...+
T Consensus 101 ~~~l~G~~---~g~--~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~ 150 (394)
T PRK03699 101 AMFVLGVV---SGI--TMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPII 150 (394)
T ss_pred HHHHHHHh---hHh--hccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222221 122 223344555666788999999988777665544444444
No 139
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.98 E-value=0.00052 Score=69.46 Aligned_cols=126 Identities=11% Similarity=0.083 Sum_probs=85.8
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF-- 310 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l-- 310 (412)
..+.+.+++|.|+++.|+..+...++..+++...+++.+|+|++|...++.....+....+ .... + ....++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~--~~~~-~---~~~l~~~r 115 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLV--SFAN-S---FSLLLIGR 115 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHH--HHHC-h---HHHHHHHH
Confidence 3455667899999999999999999999999999999999999999887776543322221 2211 1 111111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
++.|+.. |. .-.....+..+..|+++||++++...+..+....+...++....+
T Consensus 116 ~l~G~~~---g~--~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~ 169 (394)
T PRK10213 116 ACLGLAL---GG--FWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE 169 (394)
T ss_pred HHHHHhh---HH--HHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1222211 22 334455566788899999999999998887766555555554443
No 140
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.96 E-value=0.00035 Score=72.76 Aligned_cols=153 Identities=13% Similarity=0.010 Sum_probs=91.0
Q ss_pred chHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015174 231 GSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQN 306 (412)
Q Consensus 231 ~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~ 306 (412)
.+..+.|+++ +|+|+.+.|...+...+++.+++.+.+++.+| +|++|+..++.....+..... .+ ... .
T Consensus 30 ~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~--~~-~~~----~ 102 (475)
T TIGR00924 30 QGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFML--AM-SIY----P 102 (475)
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHH--Hh-ccc----H
Confidence 3457778864 79999999999999999999999999999999 899999988876433222211 11 111 1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc---cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS---KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS 383 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~---~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~ 383 (412)
..+. .+..+.++|--.+..+...+.-+..|++ +|+++.+..++..+.-..+...++....+...+.+...++...
T Consensus 103 ~~~~--~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~ 180 (475)
T TIGR00924 103 DLIF--YGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVG 180 (475)
T ss_pred hHHH--HHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence 1111 1222222232223333333433334443 4888999888888876666666655444332344444443333
Q ss_pred HHHHHHHHH
Q 015174 384 VVGAAWMFC 392 (412)
Q Consensus 384 v~~~~~~~~ 392 (412)
...+...|.
T Consensus 181 ~~~~~l~~~ 189 (475)
T TIGR00924 181 MVIGLLTFF 189 (475)
T ss_pred HHHHHHHHH
Confidence 333444443
No 141
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=97.93 E-value=0.00038 Score=71.33 Aligned_cols=121 Identities=12% Similarity=0.042 Sum_probs=76.3
Q ss_pred HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015174 236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~ 315 (412)
.|++++|+|+.++|+..+...++...+....+++.+|+|+++....+......+.... ...+.. ......+....
T Consensus 51 p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~l~~~~ 125 (438)
T TIGR00712 51 PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLM--GFVPWA---TSSIAIMFVLL 125 (438)
T ss_pred HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHH--hccccc---cchHHHHHHHH
Confidence 3566679999999999999999999999999999999999887776654433222221 111100 01111111111
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 361 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~ 361 (412)
.+.+++.-...........+..|+++||+++|..++..+....+..
T Consensus 126 ~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~ 171 (438)
T TIGR00712 126 FLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPP 171 (438)
T ss_pred HHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHH
Confidence 1122221112233444556778999999999999988887555443
No 142
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.90 E-value=0.00068 Score=66.51 Aligned_cols=118 Identities=14% Similarity=0.013 Sum_probs=73.0
Q ss_pred hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
...+.+.+++|+|+.+.|+..++..++..++....+++.+|+|+++....+.....+....+ .+.+ + ...++.
T Consensus 24 ~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~~~~ 96 (377)
T TIGR00890 24 LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFY--AIAD-S----LAALYL 96 (377)
T ss_pred hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHH--HHHH-H----HHHHHH
Confidence 34444556799999999999999999999999999999999999999887665433222221 2211 1 111111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESV 359 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll 359 (412)
+-.+.++|.-....+.....++..| ++||++++...+.......+
T Consensus 97 --~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~ 141 (377)
T TIGR00890 97 --TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFI 141 (377)
T ss_pred --HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhH
Confidence 1111222221111223334445444 67999999988877654433
No 143
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.88 E-value=0.023 Score=58.95 Aligned_cols=110 Identities=12% Similarity=-0.087 Sum_probs=76.4
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhh
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALG 84 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~ 84 (412)
-+..++++-.++|.+.||.+-||++..+-+.-.+. .. +..+.. + . ..+.+.=++.|..+-..- +..
T Consensus 71 F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~----t~--L~~fa~-----S-l-~~L~i~R~llGvaEA~~~-A~~ 136 (511)
T TIGR00806 71 LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCV----WL--LLLLGT-----S-V-WHMQLMEVFYSVTMAARI-AYS 136 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH----HH--HHHHHH-----H-H-HHHHHHHHHHHHHHHHHH-HHH
Confidence 35678899999999999999999987775433221 11 111211 0 1 244555567777776655 555
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT 137 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~ 137 (412)
..+.+ | ++++ +..++++..+....++++++|+++++ +..+||+.
T Consensus 137 syI~~-W----fP~k---ER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~ 180 (511)
T TIGR00806 137 SYIFS-L----VPPS---RYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWIS 180 (511)
T ss_pred HHHHH-H----CCHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchh
Confidence 54543 4 4433 79999999999999999999999999 55579996
No 144
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.88 E-value=0.00072 Score=68.03 Aligned_cols=126 Identities=13% Similarity=-0.010 Sum_probs=79.3
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
..+.+.+++|+|+.++|++.+...++..++.+..+++.+|+|+++........ ...... ......+ .. .+.
T Consensus 13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~-~~~~~~--~~~~~~~----~~--~l~ 83 (368)
T TIGR00903 13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLAT-FAAAAG--RLLDPFN----YE--WLL 83 (368)
T ss_pred hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHH-HHHHHH--HHHHhcc----HH--HHH
Confidence 35666778999999999999999999999999999999999976654433221 111111 1111111 11 111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN 368 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~ 368 (412)
.+-++.++|.-.+ ........|..|+++||++.+...+-+..-.++...++....
T Consensus 84 ~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~ 138 (368)
T TIGR00903 84 ACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY 138 (368)
T ss_pred HHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1211122232122 233334478889999999999999888876666666654443
No 145
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=97.87 E-value=0.0012 Score=68.94 Aligned_cols=137 Identities=13% Similarity=-0.045 Sum_probs=90.8
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH--H
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--F 311 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--~ 311 (412)
.+.+.+++|.++.++++..+...++...+....+++.+|+|+++...++..........+ .+.. + ...++. +
T Consensus 29 ~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~--~~a~-~---~~~li~~r~ 102 (495)
T PRK14995 29 APTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA--AFSP-T---ASWLIATRA 102 (495)
T ss_pred HHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HHcC-C---HHHHHHHHH
Confidence 344456799999999999999999999999999999999999999988776433333332 2221 1 111111 1
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS 380 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s 380 (412)
+.|+ ..|. ....+...+.+...|+++||+..|...+.......+.+.++....+...+.+...+.
T Consensus 103 l~G~---g~~~-~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~ 167 (495)
T PRK14995 103 LLAI---GAAM-IVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLIN 167 (495)
T ss_pred HHHH---HHHH-HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHH
Confidence 1222 1122 233444445566668899999999999999887777777766665544444444443
No 146
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.87 E-value=0.00041 Score=57.71 Aligned_cols=114 Identities=15% Similarity=0.050 Sum_probs=72.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhh
Q 015174 251 FSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGA 330 (412)
Q Consensus 251 ~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~ 330 (412)
+.....++.+.+....+++.+|+|+++....+......+.... . ...+ ... +.......+++.-..+....
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~--~-~~~~----~~~--~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMF--A-LSSN----ITV--LIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHH--H-Hhcc----HHH--HHHHHHHHHHHHHHHHHhHH
Confidence 4456678889999999999999999988776654333222211 1 1111 111 11112222233323456677
Q ss_pred HHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCch
Q 015174 331 QILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHF 373 (412)
Q Consensus 331 ~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f 373 (412)
...+|..|+++||++++..++.++....+.........+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 116 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGW 116 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccch
Confidence 7788999999999999999999988766666665555444333
No 147
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=97.86 E-value=0.0005 Score=69.57 Aligned_cols=122 Identities=9% Similarity=-0.093 Sum_probs=89.4
Q ss_pred HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015174 236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~ 315 (412)
.+.+++|.++..+|+..+...+...+...+.+++.+|+|++|+..++.....+..+.+ .+.. . ....-++.
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~--~~~~-~----~~~~r~l~-- 98 (393)
T PRK11195 28 ALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLM--LFGI-H----PLLAYGLV-- 98 (393)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHH--HHHH-H----HHHHHHHH--
Confidence 3457899999999999999999999999999999999999999998877554333222 1111 1 11111122
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
++|--.+..+...+.-+.+|+++|++++|..+...+....+.+.++....+
T Consensus 99 ---G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 99 ---GIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred ---HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444777888899999999999999999999888766666666554433
No 148
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=97.85 E-value=0.0011 Score=66.53 Aligned_cols=127 Identities=12% Similarity=-0.006 Sum_probs=80.1
Q ss_pred chHHHHHHHhcCCCCch-----hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc
Q 015174 231 GSLMTAFLTQRGLNPSI-----IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ 305 (412)
Q Consensus 231 ~~~~~~y~~~~gls~~~-----~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~ 305 (412)
....+.|.+++|+++.. .|+..+...++..++....+++.+|+|+++...++........... .. ..+.. .
T Consensus 34 ~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~-~~~~~-~ 109 (408)
T PRK09874 34 MPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLM--GL-AQNIW-Q 109 (408)
T ss_pred hhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHH--HH-HhhHH-H
Confidence 33467788889998764 4899999999999999999999999999988876655333222111 11 11100 0
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
..+..++.|+. .+. ++ .......+..|+++||++++..+...+....+...+....
T Consensus 110 ~~~~~~~~g~~---~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 110 FLILRALLGLL---GGF--VP-NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHHHHHHHh---hhh--HH-hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111122221 122 33 3445667778999999999998887766555555554433
No 149
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.84 E-value=0.0012 Score=66.94 Aligned_cols=132 Identities=7% Similarity=-0.110 Sum_probs=85.8
Q ss_pred HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015174 239 TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 318 (412)
Q Consensus 239 ~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s 318 (412)
++.|+|+.+.|+..+...++..++....+++.+|+|+++...++.....+..... .+.. + .. .+..+-++.
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~--~l~~~r~l~ 116 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLS--GLAS-G----VI--MLTLSRFIV 116 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHh-H----HH--HHHHHHHHH
Confidence 4689999999999999999999999999999999999999887766433322221 2211 1 11 111122222
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL 379 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~ 379 (412)
++|.-........+..+..|+++||++++...+.......+...+.....+...+.....+
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 3333234556677788889999999999998877666555554444333333333333333
No 150
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.84 E-value=0.0053 Score=64.53 Aligned_cols=351 Identities=15% Similarity=0.071 Sum_probs=177.6
Q ss_pred HHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHH-HHHHHHHHHHHhhhhhhhhc
Q 015174 10 IVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFV-LVLAGAVERLTGVALGVAVE 88 (412)
Q Consensus 10 ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~l~~~a~~~ai~ 88 (412)
++.||+++.+.||++.|+++++..++......++ .+..+ . |.+++. -++.|....+........+.
T Consensus 95 ~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~ls------sF~~~------i-~~l~lt~gvi~G~G~~~~~~paiviv~ 161 (509)
T KOG2504|consen 95 LLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLS------SFATS------L-WQLYLTFGVIGGLGLGLIYLPAVVILG 161 (509)
T ss_pred HHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHH------HHHhh------H-HHHHHHHHHHhhccchhhhcchhhhhh
Confidence 4459999999999999999888876554433322 22221 2 233322 22333333333333322222
Q ss_pred ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc
Q 015174 89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVL 168 (412)
Q Consensus 89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l 168 (412)
+ -+++ +...+|+.-..-..+..++=|.+--.++.-.||+..++...... ++..+... ..+.+..+..
T Consensus 162 ~-----YF~k----kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~-l~~~~~~~---~~rp~~~~~~ 228 (509)
T KOG2504|consen 162 T-----YFEK----KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGIS-LNVLVAGA---LLRPLSPPKK 228 (509)
T ss_pred h-----HhHH----HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHH-HHHHHHHH---HcCCCCcCCC
Confidence 1 1333 57788888888899999899999999999999998876543332 22222211 1111111010
Q ss_pred cc-----------------cccccc-ccCCCCCC---CCCCchhhhHHhHH--HHHHhH----HHHhcCCcchH-HHHHH
Q 015174 169 DR-----------------AKCSQS-CCRTSNEG---PVPDADNIVDVGIE--AIKLGW----KEYMQQPVLPA-SLAYV 220 (412)
Q Consensus 169 ~~-----------------~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~--~~~~g~----~~~~~~~v~~~-~~~~a 220 (412)
+. +.+.+. +.++...+ ...+..+..+...+ ...... ..+++||.|+- .++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~ 308 (509)
T KOG2504|consen 229 PNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNL 308 (509)
T ss_pred chhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHH
Confidence 00 000000 00000000 00000000000000 111222 35778887776 22222
Q ss_pred HHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcC
Q 015174 221 LLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSG 300 (412)
Q Consensus 221 ~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g 300 (412)
+.++. ...+......|.+++|+++.....+..+.++..+.|=++.+.+..+....+.-...+..-...+..+..++...
T Consensus 309 ~~~~g-~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~ 387 (509)
T KOG2504|consen 309 FAYLG-FNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATT 387 (509)
T ss_pred HHHHH-HHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22221 11111234556778999999999999999999999999999999988843332211111001111111122211
Q ss_pred CCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCc-hhHHHHH
Q 015174 301 SLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSH-FGFLATL 379 (412)
Q Consensus 301 ~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~-f~~l~~~ 379 (412)
...+..+ ..+.....|- +-.-...+.-+.+..++...+.|.+.-.+-+..+...-+....-|-+. +......
T Consensus 388 ----~~~l~~~-~~~fG~~~g~--~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~ 460 (509)
T KOG2504|consen 388 ----YVGLIVF-SILFGFCVGS--FSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYF 460 (509)
T ss_pred ----HHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhh
Confidence 1111111 1111112222 223334567778888999999999999888866666655555544443 4444443
Q ss_pred H-HHHHHHHHHHHHHH
Q 015174 380 S-LLSVVGAAWMFCHW 394 (412)
Q Consensus 380 s-~~~v~~~~~~~~~~ 394 (412)
. ++...++...+..+
T Consensus 461 ~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 461 CGLCFLLSAVLLLILR 476 (509)
T ss_pred cChHHHHHHHHHHHhH
Confidence 3 33333443444433
No 151
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.83 E-value=0.0011 Score=68.69 Aligned_cols=135 Identities=13% Similarity=-0.031 Sum_probs=90.2
Q ss_pred HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015174 236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~ 315 (412)
.+.+++|+|+...|++.+...++.+.+....+++.+|+|++|....+.....+..... .+.. + ... +..+.
T Consensus 45 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~--~~~~-~----~~~--l~~~~ 115 (496)
T PRK03893 45 EVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLAC--GFAP-G----YWT--LFIAR 115 (496)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHh-H----HHH--HHHHH
Confidence 3345789999999999999999999999999999999999998876654332221111 1111 1 111 11122
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATL 379 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~ 379 (412)
++.+++.-....+...+.++..|+++||++++...+.++....+...+.....+...+.....+
T Consensus 116 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~ 179 (496)
T PRK03893 116 LVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFI 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 2223333335566778889999999999999999998887666666665555444444444333
No 152
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=97.82 E-value=0.0015 Score=66.05 Aligned_cols=124 Identities=19% Similarity=0.074 Sum_probs=80.7
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
...+.+++|.|+.+.++..+...++...+....+++.+|+|++|...++.....++...+ .... + ...++ .
T Consensus 36 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~----~~~l~--~ 106 (406)
T PRK15402 36 MLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAI--LLAQ-S----IEQFT--L 106 (406)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH--HHHc-c----HHHHH--H
Confidence 444567899999999999999999999999999999999999998887765333222221 2211 1 11111 1
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII 366 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~ 366 (412)
+-.+.+++.-..........++..|+++|++..+...........+...++..
T Consensus 107 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~ 159 (406)
T PRK15402 107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA 159 (406)
T ss_pred HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111222212334556677888899999999998877776555554444433
No 153
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.82 E-value=0.001 Score=67.20 Aligned_cols=124 Identities=14% Similarity=0.118 Sum_probs=82.6
Q ss_pred chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
+...+...+++|.|..+.|+..+...++..++....+++.+|+|++|+...+..........+ .+.++. ..++
T Consensus 29 ~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~--~~a~~~-----~~ll 101 (393)
T PRK09705 29 GPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMR--ELYPQS-----ALLL 101 (393)
T ss_pred chhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHH--HHCcch-----HHHH
Confidence 334555567899999999999999999999999999999999999999998876544333332 333211 1111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
+ +-++.++|.-........+.++..| ++||+++|...+.+..-..+...++
T Consensus 102 ~--~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~ 152 (393)
T PRK09705 102 S--SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAIT 152 (393)
T ss_pred H--HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222333333344455555565554 8899999998887766444444443
No 154
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.80 E-value=0.0017 Score=64.05 Aligned_cols=120 Identities=13% Similarity=0.116 Sum_probs=77.6
Q ss_pred cchHHHHHH-HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 230 PGSLMTAFL-TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 230 ~~~~~~~y~-~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
+....+.|+ +++|+|+.+.|++.+...++...+....+++.+|+|++|...++.....+....+ .+...+ ...
T Consensus 20 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~--~~~~~~----~~~ 93 (366)
T TIGR00886 20 FSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA--GLAVQS----YSV 93 (366)
T ss_pred hHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH--HHHhhh----HHH
Confidence 444455445 5799999999999999999999999999999999999999887765433322221 221101 111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l 358 (412)
++ .+-++.+++--.+. ....+.-+..|+++||++.+...+.++....
T Consensus 94 ~~--~~~~~~g~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 140 (366)
T TIGR00886 94 LL--LLRLFIGIAGGSFA-SCMPWISFFFPKKIQGTALGLAAGWGNMGGG 140 (366)
T ss_pred HH--HHHHHHHHhchhhH-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHH
Confidence 11 11111122211233 3455677778999999999998877665433
No 155
>PRK10133 L-fucose transporter; Provisional
Probab=97.79 E-value=0.0014 Score=67.40 Aligned_cols=126 Identities=13% Similarity=0.030 Sum_probs=84.7
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFL 312 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~ 312 (412)
..+.+.+++|+|+.+.|+..+...++..++....+++.+|+|++|+..++.....+....+.......+ ...+.
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~------~~~ll 121 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMN------YTLFL 121 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCC------HHHHH
Confidence 444555579999999999999999999999999999999999999999887654444333211111111 11222
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
.+.+..++|.-..+.+.+.+..+..|++++++..+...+.+..-..+....+
T Consensus 122 ~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 122 VGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333344455457777777777766677776667777777666555555443
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.77 E-value=0.0013 Score=64.99 Aligned_cols=124 Identities=18% Similarity=0.208 Sum_probs=79.4
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
++...+.+.+++|+|+.+.|+..+...++..++....+++.+|+|.+|...++.......... ...+ + ...+
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~---~~~~-~----~~~l 90 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILI---RSAP-G----TALL 90 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHH---HHhc-c----HHHH
Confidence 344566677889999999999999999999999999999999999999988776532222111 1111 1 1111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
+ .+-+..++|.-..+.....+..+.. +++||++++..++.++....+...++
T Consensus 91 ~--~~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 91 F--AGTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred H--HHHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1111222232122333333444444 46899999999988877555554443
No 157
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.76 E-value=0.00035 Score=72.32 Aligned_cols=143 Identities=14% Similarity=-0.011 Sum_probs=85.8
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH
Q 015174 216 SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA 295 (412)
Q Consensus 216 ~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~ 295 (412)
.+.+...|+. -..++...+.+.+++|+|+.++|++.+...++..++....+++.+|+|.+|....+.....+..... .
T Consensus 35 ~~~~~~~y~~-r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~-~ 112 (467)
T PRK09556 35 FIGYLTMYLI-RKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGF-G 112 (467)
T ss_pred HHHHHHHHHH-hcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHH-H
Confidence 3334444432 1334444555567899999999999999999999999999999999999998776654322211111 1
Q ss_pred HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 296 VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 296 ~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
....+. +.....++. .-.+.+++--..-.....+.-+..|+++||++.|...+..+....+...+
T Consensus 113 ~~~~~~-~~~~~~l~~--~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i 177 (467)
T PRK09556 113 ASLGSG-SVSLGLMIA--LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGV 177 (467)
T ss_pred HHHhcc-cchHHHHHH--HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHH
Confidence 111110 001111111 11111222111224455678888999999999999888776655444433
No 158
>PRK11043 putative transporter; Provisional
Probab=97.75 E-value=0.0022 Score=64.58 Aligned_cols=124 Identities=18% Similarity=0.118 Sum_probs=78.3
Q ss_pred HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015174 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~ 316 (412)
+.+++|.|+++.|+..++..++...+....+++.+|+|+++....+.....+.... ..+..+ ...++ .+..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~---~~~~~~----~~~l~--~~~~ 102 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLG---MLWVES----AAQLL--VLRF 102 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHH---HHHhcC----HHHHH--HHHH
Confidence 45678999999999999999999999999999999999999887665432222111 111111 11111 1112
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+.++|.-........+..+..|+++++++.+...+.......+...++....+
T Consensus 103 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~ 155 (401)
T PRK11043 103 VQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN 155 (401)
T ss_pred HHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222212233445566777888889988888777666555555555444433
No 159
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.74 E-value=0.032 Score=58.60 Aligned_cols=121 Identities=17% Similarity=0.115 Sum_probs=69.9
Q ss_pred HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-HhcCC-C--cCcchHH-HHH
Q 015174 238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YWSGS-L--SQQNPLL-FFL 312 (412)
Q Consensus 238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~~g~-~--~~~~~~~-l~~ 312 (412)
.++.|.+... -..--.-++..+.+++++..+.+|+|+++.++.+...+..+....... ..... . ....... +..
T Consensus 322 f~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (513)
T KOG0254|consen 322 FKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVF 400 (513)
T ss_pred HHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHH
Confidence 4556776543 333344455556788888999999999999998887766655443322 11111 0 0001111 111
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
..+....+.. .+...--.+.-|..|.+.|++..+...+.|+....+.
T Consensus 401 ~~~~v~~f~~-g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v 447 (513)
T KOG0254|consen 401 LCLFIFSFAI-GWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI 447 (513)
T ss_pred HHHHHHHHhc-ccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH
Confidence 1111111111 2223333567788899999999999999999866544
No 160
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.70 E-value=0.0009 Score=68.02 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=60.6
Q ss_pred HhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 207 YMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 207 ~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
+++||.++......+++ +. ...+.+....|+++ +|+|+.+.|+..+...++..++....+++.+|+|++|...++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 6 YLKNPNYWIFSLFFFFFFFI-WSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred hhcCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 46788888754444444 32 13345677888876 89999999999999999999999999999999999998876543
No 161
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=97.70 E-value=0.0014 Score=69.07 Aligned_cols=174 Identities=10% Similarity=0.069 Sum_probs=109.5
Q ss_pred hcCCcchHHHHHHHHHHHhhhccchH-HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHH
Q 015174 208 MQQPVLPASLAYVLLCLNVVLTPGSL-MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQ 286 (412)
Q Consensus 208 ~~~~v~~~~~~~a~l~~t~v~~~~~~-~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~ 286 (412)
+|||.|+.-..-..+... ...+..+ ...|.+++.-|+..+|++..+..+-.++-+..++.+..|++++|.+.++-.++
T Consensus 7 lr~~~Fr~lw~a~~iS~l-G~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~ 85 (524)
T PF05977_consen 7 LRNRNFRRLWIAQLISNL-GDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLR 85 (524)
T ss_pred ccCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHH
Confidence 577777773332222210 1111111 33456677889999999999999999999999999999999999998877765
Q ss_pred HHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH-
Q 015174 287 ASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI- 365 (412)
Q Consensus 287 ~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~- 365 (412)
.+.........+.+..+ +..++. -.++.+++--.++.+.+.+..+.||+++..++|+..+...+...++.+.+++
T Consensus 86 ~~~~~~L~~l~~~~~~~---~~~Ll~-~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~ 161 (524)
T PF05977_consen 86 ALVALLLAVLAFFGLLS---PWLLLI-LTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI 161 (524)
T ss_pred HHHHHHHHHHHHhCcCC---HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH
Confidence 54433332233344322 111111 1122233444588999999999999999999999998888887666655543
Q ss_pred hccCCCchhHHHHHHHHHHHH
Q 015174 366 IANDVSHFGFLATLSLLSVVG 386 (412)
Q Consensus 366 ~~~~~~~f~~l~~~s~~~v~~ 386 (412)
+...-+.-....+-+++.+.+
T Consensus 162 Lva~~G~~~~f~inalsfl~~ 182 (524)
T PF05977_consen 162 LVAFFGAAAAFLINALSFLIS 182 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333334444443
No 162
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.66 E-value=0.0027 Score=69.68 Aligned_cols=116 Identities=11% Similarity=-0.067 Sum_probs=79.6
Q ss_pred HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015174 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~ 316 (412)
+..+.|+++...|++.++..++.++|+++.+++..|+|+++...++.....++.+.+ .+.+ + ... +..+-+
T Consensus 193 i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~--afa~-s----~~~--llv~R~ 263 (742)
T TIGR01299 193 AEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFS--SFVQ-G----YGF--FLFCRL 263 (742)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH--HHHh-h----HHH--HHHHHH
Confidence 345789999999999999999999999999999999999999887765433332222 2222 1 111 111222
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 361 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~ 361 (412)
+.++|.-..-.....+..|..|++.||++.+..++......++..
T Consensus 264 l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~ 308 (742)
T TIGR01299 264 LSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAA 308 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223343334456677788889999999999988877665444443
No 163
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=97.63 E-value=0.0015 Score=74.87 Aligned_cols=121 Identities=8% Similarity=-0.002 Sum_probs=82.2
Q ss_pred cCCC--CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHh
Q 015174 241 RGLN--PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLS 318 (412)
Q Consensus 241 ~gls--~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~s 318 (412)
.+.+ ....|+..++..++.++++...+++..|+|+++.+.++.....+...........++ ...+..+.++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~ 113 (1146)
T PRK08633 40 YDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGW------FWLAFAVTFLL 113 (1146)
T ss_pred cCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHH
Confidence 4444 445788889999999999999999999999999988776654433333222222211 11111222223
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
+++.-.+..+...+..+.+|+++||+++|...+..+...++...++..+
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l 162 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL 162 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3344346677778899999999999999999999888666666665444
No 164
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.63 E-value=0.0032 Score=65.85 Aligned_cols=153 Identities=12% Similarity=0.082 Sum_probs=95.5
Q ss_pred hHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 232 SLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-GILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 232 ~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
...+.|+. ++|+|+.+.+.+.+.......++.++.+++.+|+ |++|+..++.....+....+ . ..+.. ....
T Consensus 30 ~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll--~-~~~~~---~~~~ 103 (493)
T PRK15462 30 ALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVL--G-ASEIH---PSFL 103 (493)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHH--H-Hhhcc---hhHH
Confidence 34778876 4799999999999999999999999999999999 99999888876544332211 1 11110 1111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGA 387 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~ 387 (412)
....+....+.|+ +..+...+..|..|++ +|++..+...+..+....+.+.+.....+...+...-.++......+
T Consensus 104 ~l~l~li~iG~G~--~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~ 181 (493)
T PRK15462 104 YLSLAIIVCGYGL--FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAG 181 (493)
T ss_pred HHHHHHHHHhccc--ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHH
Confidence 1111222223454 3333445566666654 79999999999988877777777655544333333333333334444
Q ss_pred HHHHH
Q 015174 388 AWMFC 392 (412)
Q Consensus 388 ~~~~~ 392 (412)
...|.
T Consensus 182 li~~~ 186 (493)
T PRK15462 182 LVIFL 186 (493)
T ss_pred HHHHH
Confidence 44443
No 165
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.61 E-value=0.13 Score=53.92 Aligned_cols=313 Identities=12% Similarity=0.075 Sum_probs=152.7
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHH-HHHHHHHHHHhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVL-VLAGAVERLTGVALGV 85 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~~~~l~~~a~~~ 85 (412)
+-.++-+...|.+.||++||+++.++.+.+.+.-.+++ +... . ..+.+. ++.|....-.......
T Consensus 129 ~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a------~a~~------~--~~~~~~Rfl~G~~~~~~~~~~~~ 194 (521)
T KOG0255|consen 129 LGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA------FAPN------Y--WMFLIFRFLSGFFGSGPLTVGFG 194 (521)
T ss_pred HHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH------HhCc------H--HHHHHHHHHHHhhccchhHHhHh
Confidence 34455566678999999999999999887755422111 1110 1 222222 1222221111111111
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc-
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKIS- 164 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~- 164 (412)
++..+++++ +...+.+. ...--.....+|..++.+.. +|+..+++......+.+.. + .++
T Consensus 195 -----~~~E~~~~~---~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-----~---~l~~ 255 (521)
T KOG0255|consen 195 -----LVAEIVSPK---QRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-----W---FLPP 255 (521)
T ss_pred -----hheeecCcc---hhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-----H---HccC
Confidence 222367654 56666666 77777788999999999998 9998887654444433321 1 112
Q ss_pred ccccc----cccc--cccccCC-CCC-CCCCCchhhhHHh-----HHHH----HHhHHHHhcCCcchH-HHHHHHHHHHh
Q 015174 165 SGVLD----RAKC--SQSCCRT-SNE-GPVPDADNIVDVG-----IEAI----KLGWKEYMQQPVLPA-SLAYVLLCLNV 226 (412)
Q Consensus 165 ~~~l~----~~~~--~~~~~~~-~~~-~~~~~~~~~~~~~-----~~~~----~~g~~~~~~~~v~~~-~~~~a~l~~t~ 226 (412)
| .++ +.+. .++..++ .+. +...+..+..+.. .+.. ...+...++.|.++- .+...+.++..
T Consensus 256 E-s~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 334 (521)
T KOG0255|consen 256 E-SPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF 334 (521)
T ss_pred c-ChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHH
Confidence 2 110 0000 0000000 000 0000000000000 0000 012455566664443 22222222221
Q ss_pred hhccchHHHHHHHh---cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 015174 227 VLTPGSLMTAFLTQ---RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS 303 (412)
Q Consensus 227 v~~~~~~~~~y~~~---~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~ 303 (412)
. +..|... .+++.. +.+.....+...+-+.+....+..|.|++.....+..... +.+....+.....
T Consensus 335 -~-----~~y~gl~~~~~~lg~~-~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~---~~~~~~~~~~~~~ 404 (521)
T KOG0255|consen 335 -S-----LVYYGLSLNVSGLGGN-IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAG---IGLLLFGWLPDDL 404 (521)
T ss_pred -h-----HHHHhhhhhhhhcCch-HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHH---HHHHHHHHhhccc
Confidence 1 2233221 222222 4444445555667777777888999988777665554322 2222222221111
Q ss_pred Cc-chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 304 QQ-NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 304 ~~-~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
.. ....+...|-... +. .++.. .+..-|..|..-|+.+.+..........++.+......
T Consensus 405 ~~~~~~~~~~~~~~~~--~~-~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 405 GGWLHWILPLLGKFFI--GS-AFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred hhHHHHHHHHHHHHHH--HH-HHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 1122222222222 22 44555 77778888999999999999999998777777666444
No 166
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.60 E-value=0.0028 Score=65.20 Aligned_cols=114 Identities=15% Similarity=0.063 Sum_probs=72.7
Q ss_pred HHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch--HHHHHH
Q 015174 236 AFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP--LLFFLC 313 (412)
Q Consensus 236 ~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~--~~l~~~ 313 (412)
.|+.+.|+|+.++|+..+...++..++....+++.+|+|+++...++.....+....+ .+.+...+.... ...++.
T Consensus 53 p~l~~~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~l~ 130 (452)
T PRK11273 53 PYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFM--GFVPWATSSIAVMFVLLFLC 130 (452)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHH--HhhhcccccHHHHHHHHHHH
Confidence 3554449999999999999999999999999999999999998877765333222211 211100000011 111222
Q ss_pred HHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015174 314 LIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356 (412)
Q Consensus 314 g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~ 356 (412)
|+. .|. ..........+..|+++||+..|..+......
T Consensus 131 gi~---~g~--~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 168 (452)
T PRK11273 131 GWF---QGM--GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVG 168 (452)
T ss_pred HHH---Hhc--cchHHHHHHHHhCChHHHHHHHHHHHHHHHhh
Confidence 332 122 22333455667789999999999987776654
No 167
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.57 E-value=0.0028 Score=64.14 Aligned_cols=131 Identities=12% Similarity=0.042 Sum_probs=85.6
Q ss_pred CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh
Q 015174 243 LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH 322 (412)
Q Consensus 243 ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL 322 (412)
.++.+.|+..+...++..++....+++.+|+|+++....+..........+ .+.... .....+..+-++.++|.
T Consensus 68 ~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~r~l~G~~~ 141 (481)
T TIGR00879 68 YSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILM--GLAAFA----LSVEMLIVGRVLLGIGV 141 (481)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHH--HHhccc----cchHHHHHHHHHHHhhh
Confidence 448999999999999999999999999999999998877765433322222 111111 11111112223333344
Q ss_pred hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH---HhccCCCchhHHHHH
Q 015174 323 MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA---IIANDVSHFGFLATL 379 (412)
Q Consensus 323 w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~---~~~~~~~~f~~l~~~ 379 (412)
-........+..+..|+++||++.+..++....-..+...+. ....+...+.+...+
T Consensus 142 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 142 GIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred hHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 345566777889999999999999999888877666666655 343333344433333
No 168
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.56 E-value=0.0058 Score=62.26 Aligned_cols=122 Identities=14% Similarity=0.072 Sum_probs=80.0
Q ss_pred HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015174 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~ 316 (412)
..+++|.|+...++..++..+++.++.+..+++.+|+|++|...++.....++...+ .. ..+ ....+ .+-+
T Consensus 42 i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~--~~-a~~---~~~l~---~~r~ 112 (413)
T PRK15403 42 VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAAT--LF-TTS---MTQFL---IARF 112 (413)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHH--HH-cCC---HHHHH---HHHH
Confidence 345789999999999999999999999999999999999998887765433222222 21 211 11111 1111
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
+.++|.-..........++..|++++++..+...+.......+...++...
T Consensus 113 l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 113 IQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222112223345567778999999999998888877666666665443
No 169
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.56 E-value=0.004 Score=62.94 Aligned_cols=127 Identities=20% Similarity=0.097 Sum_probs=80.8
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQN 306 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~ 306 (412)
..+.|++++|+|.+++|++...+.. .....+.+++.+|+ |++|. +.++... +.+.........+... .
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~---~~l~~~~l~~~~~~~~-~ 94 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVG---LAASIAAMAFCPPHAA-L 94 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHH---HHHHHHHHHhcCccch-H
Confidence 5788999999999999999877776 58889999999999 77653 4443332 2111111122111111 1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
. .++..+++.+ ..--..|.+...+.-|.+|+++||+.++.+..-+....++...+....
T Consensus 95 ~-~l~~~~~~~~-~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 95 W-PLAGLAVLVA-FLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred H-HHHHHHHHHH-HHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 1 1122222222 223357888889999999999999999999987776555555444333
No 170
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.52 E-value=0.0017 Score=66.86 Aligned_cols=121 Identities=11% Similarity=0.034 Sum_probs=80.8
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
++|+++...|++.+...++.+++....+++.+|+|.++...++.....+....+ ...... + ... ++. .-++.+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~~~-~-~~~--l~~-~r~~~G 142 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVI--PWAAGG-G-IAL--VVF-CRVIQG 142 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHH--HHHHHc-C-chH--HHH-HHHHHH
Confidence 578999999999999999999999999999999999998877665322221111 111101 0 111 111 111122
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
++--........+..+..|+++||+++|...+.......+...+....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l 190 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL 190 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233234456777888999999999999999997777665555554444
No 171
>TIGR00901 2A0125 AmpG-related permease.
Probab=97.51 E-value=0.006 Score=60.25 Aligned_cols=126 Identities=15% Similarity=0.059 Sum_probs=76.5
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhHHH-HHHHHHHHHHHHHHHHHhcCCCcCcc
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKAGA-AGLIFQASLLAMAVAVYWSGSLSQQN 306 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~ 306 (412)
..+.+.+++|+|.+++|+.... .....+ .++.+++.+|+ |++|... .+.....++ .....+..+.. .
T Consensus 10 ~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~--~~~l~~~~~~~---~ 82 (356)
T TIGR00901 10 TLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSL--LLILSFLVPST---D 82 (356)
T ss_pred HHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHH--HHHHHcCCcch---h
Confidence 3667788999999999999655 333333 77888888887 7777643 333221111 11112222211 1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHh
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAII 366 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~ 366 (412)
...+...++... .+--..|.+...+.-|.+|+++||++++.+.+-.....++...++..
T Consensus 83 l~~l~~~~~~~~-~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 83 LPLLAGLAFLIA-FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111122221 22235788889999999999999999999988777766555555433
No 172
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.51 E-value=0.007 Score=62.93 Aligned_cols=110 Identities=13% Similarity=0.024 Sum_probs=71.8
Q ss_pred HHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH--HHH
Q 015174 235 TAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL--FFL 312 (412)
Q Consensus 235 ~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~--l~~ 312 (412)
..+.+++|+|+.++|...+...++.+.+.++.+++.+|+|+++...++.....+.... ..+.. + ....+ -++
T Consensus 60 ~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~--~~~~~-s---~~~l~~~r~l 133 (476)
T PLN00028 60 PIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFC--MSLVS-S---ATGFIAVRFF 133 (476)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHH--HHHhc-C---HHHHHHHHHH
Confidence 3445679999999999999999999999999999999999998877665432222111 12221 1 11111 122
Q ss_pred HHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHH
Q 015174 313 CLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLV 356 (412)
Q Consensus 313 ~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~ 356 (412)
.|+ |...+ ........+..|+++||+++|+.++..+..
T Consensus 134 ~G~-----~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g 171 (476)
T PLN00028 134 IGF-----SLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLG 171 (476)
T ss_pred HHH-----HHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHH
Confidence 232 22122 223345667789999999999988766553
No 173
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=97.48 E-value=0.0079 Score=59.38 Aligned_cols=52 Identities=25% Similarity=0.200 Sum_probs=44.3
Q ss_pred cchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHH
Q 015174 230 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAA 281 (412)
Q Consensus 230 ~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~ 281 (412)
.......|+. ++|.|+.+.|++.+...+.+++.+...+++.+|+|++|....
T Consensus 16 ~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 68 (375)
T TIGR00899 16 QFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL 68 (375)
T ss_pred HhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence 3445667775 689999999999999999999999999999999999887554
No 174
>PRK15011 sugar efflux transporter B; Provisional
Probab=97.40 E-value=0.014 Score=58.89 Aligned_cols=51 Identities=22% Similarity=0.217 Sum_probs=37.4
Q ss_pred cchHHHHHHH-hcCCCCchhHHHhhHHHH-HHHHHHHHHHHHHHHhchhhHHHH
Q 015174 230 PGSLMTAFLT-QRGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRRLGILKAGAA 281 (412)
Q Consensus 230 ~~~~~~~y~~-~~gls~~~~G~~~~~~av-ggllGt~l~~~l~~R~g~~r~~~~ 281 (412)
+......|++ ++|.|++++|+..+...+ +.+.+.+..++ .+|+|++|....
T Consensus 34 ~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~ 86 (393)
T PRK15011 34 QTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIV 86 (393)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHH
Confidence 3445677775 589999999999877655 55555655566 899999887543
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.40 E-value=0.0058 Score=62.87 Aligned_cols=122 Identities=10% Similarity=0.016 Sum_probs=78.2
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHH-Hh-c--CCCcCcchHHHHHHHHH
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAV-YW-S--GSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~-~~-~--g~~~~~~~~~l~~~g~~ 316 (412)
+|.++.+.|+..+...++..+|+.+.+++.+|+|++|+...+.....++...+... +. . ...+ ......+..+=+
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~R~ 128 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDN-TGYVPEFVIYRI 128 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccc-hhHHHHHHHHHH
Confidence 48999999999999999999999999999999999999888766533332222111 00 0 0000 111111112222
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
+.++|.-........+..|..|+++||++.+........-.++.+..
T Consensus 129 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~ 175 (479)
T PRK10077 129 IGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFV 175 (479)
T ss_pred HHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 22333333445666678899999999999999876655544444443
No 176
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.36 E-value=0.01 Score=61.48 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=101.0
Q ss_pred HHHHHH-hcCCCCch-hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 234 MTAFLT-QRGLNPSI-IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 234 ~~~y~~-~~gls~~~-~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
...|+. ++|+++++ +|.+.+....+..+.-+..+++..|+|.++.+.++.....++-.+. .+.. +.. ...+.=+
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~--~fa~-Sl~-~L~i~R~ 123 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLL--LLGT-SVW-HMQLMEV 123 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH--HHHH-HHH-HHHHHHH
Confidence 445664 79999999 9999999999999999999999999999998877665433222221 1111 100 0001111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH--hccCCCchhHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI--IANDVSHFGFLATLSLLSVVGAAW 389 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~--~~~~~~~f~~l~~~s~~~v~~~~~ 389 (412)
+.|+.- |. . .+...+.-..+|+++|+|++|..++-...-..+...++. ..-+...+..+-.+|.+++..+..
T Consensus 124 llGvaE---A~--~-~A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~ 197 (511)
T TIGR00806 124 FYSVTM---AA--R-IAYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVF 197 (511)
T ss_pred HHHHHH---HH--H-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHH
Confidence 222211 22 2 278888999999999999999999988875555554432 223566777888889888776655
Q ss_pred HHH
Q 015174 390 MFC 392 (412)
Q Consensus 390 ~~~ 392 (412)
.-+
T Consensus 198 ~a~ 200 (511)
T TIGR00806 198 LAL 200 (511)
T ss_pred HHH
Confidence 443
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.29 E-value=0.01 Score=61.99 Aligned_cols=120 Identities=14% Similarity=0.034 Sum_probs=80.3
Q ss_pred CCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhh
Q 015174 242 GLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLG 321 (412)
Q Consensus 242 gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~G 321 (412)
+.++...+++.+...++.++|+++.+++.+|+|+++...++.....++...+ .+.... ........+..+-++.++|
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~--~~~~~~-~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVAS--GLSPGS-SPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--HHccCc-ccchHHHHHHHHHHHHHHH
Confidence 4566678999999999999999999999999999999887765444333222 221211 0111122233333344445
Q ss_pred hhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 322 HMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 322 Lw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
.-........+..|..|+++||++.+.....+....++...+.
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5335566778899999999999999998888776554444443
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=97.28 E-value=0.014 Score=67.15 Aligned_cols=116 Identities=9% Similarity=-0.018 Sum_probs=76.9
Q ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015174 246 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY 325 (412)
Q Consensus 246 ~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~ 325 (412)
..+++..++..+..++.+.+.+++..|+|++|.+.+.......+.......+...+ . ..+....++.+++--.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s----~--~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS----V--PLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh----H--HHHHHHHHHHHHHHHhh
Confidence 45788888999999999999999999999988764433322222222222222111 1 11112223333343346
Q ss_pred hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhc
Q 015174 326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIA 367 (412)
Q Consensus 326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~ 367 (412)
..+...++-+.+|++++++++|...+..++..++...++...
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 677788888889999999999999999998777766665544
No 179
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.26 E-value=0.03 Score=53.72 Aligned_cols=141 Identities=11% Similarity=0.010 Sum_probs=76.3
Q ss_pred HhHHHHHHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHH--HHhcCCC----CchhHHHhhHHHHHHHHHHHHHH
Q 015174 195 VGIEAIKLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAF--LTQRGLN----PSIIGGFSGLCASMGVAATFLSA 267 (412)
Q Consensus 195 ~~~~~~~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y--~~~~gls----~~~~G~~~~~~avggllGt~l~~ 267 (412)
...++.+.+.+-...++...- +.. -.+ |.+.++.| +-+--+| +.-.|.+++.--...++|+-++.
T Consensus 232 dlltqf~gaa~aiaSD~ki~LLG~i-qsL-------FE~smytFVFLWTPaLspn~e~iPhGfiFatFMlASmLGSSla~ 303 (454)
T KOG4332|consen 232 DLLTQFKGAARAIASDEKIALLGAI-QSL-------FEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLASMLGSSLAS 303 (454)
T ss_pred HHHHHhhHhHHHHhcchHHHHHHHH-HHH-------HhhhhheeeeeecccCCCCcccCCchhHHHHHHHHHHHhhHHHH
Confidence 355667777777777654322 211 112 22223322 2121222 23368899988899999999999
Q ss_pred HHHHHhc--hhhHHHHHHHHHHHHHHHHHH--HHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccch
Q 015174 268 YLVRRLG--ILKAGAAGLIFQASLLAMAVA--VYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKAN 343 (412)
Q Consensus 268 ~l~~R~g--~~r~~~~~~~~~~~~l~~~v~--~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G 343 (412)
|+..|-. ......+........+.+.+. ...|+..++.-. +.....+=+..|+ |=.+...++.+.+||+.|.
T Consensus 304 Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s--~i~F~~~E~cvGl--fwPSimkmRsqyIPEears 379 (454)
T KOG4332|consen 304 RLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSES--LIGFCLFEACVGL--FWPSIMKMRSQYIPEEARS 379 (454)
T ss_pred HHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHH--HHHHHHHHHHHhh--cchHHHHHHHhhCCHHHHh
Confidence 9976544 445555544432222222222 222332111112 2222333345576 6678899999999999997
Q ss_pred hHHH
Q 015174 344 LIGT 347 (412)
Q Consensus 344 ~v~g 347 (412)
.+.-
T Consensus 380 timN 383 (454)
T KOG4332|consen 380 TIMN 383 (454)
T ss_pred hhhh
Confidence 7643
No 180
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.24 E-value=0.027 Score=58.44 Aligned_cols=117 Identities=9% Similarity=0.012 Sum_probs=73.4
Q ss_pred cchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHhcCCCcCcch
Q 015174 230 PGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYWSGSLSQQNP 307 (412)
Q Consensus 230 ~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~~g~~~~~~~ 307 (412)
++.+.+.+.+ ++|+|++++|++.++..+++-++-+..+++.+|+|.+|...++..... +.... .+......+...
T Consensus 53 ~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~---i~~~~~~~a~~~~~~s~~ 129 (462)
T PRK15034 53 FSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI---IPCVWLGIAVQNPNTPFG 129 (462)
T ss_pred HHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH---HHHHHHHHHHcccCCCHH
Confidence 3334444445 699999999999999999999999999999999999998887765322 22212 221100000011
Q ss_pred HH---HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015174 308 LL---FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 308 ~~---l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
.+ -++.|+ . |. .+ ........+.-|+++||++.|+.....+.
T Consensus 130 ~lli~r~l~Gi---g-g~-~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~ 174 (462)
T PRK15034 130 IFIVIALLCGF---A-GA-NF-ASSMGNISFFFPKAKQGSALGINGGLGNL 174 (462)
T ss_pred HHHHHHHHHHH---H-HH-hH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhh
Confidence 11 112233 1 22 33 34555567778999999999999644443
No 181
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.23 E-value=0.021 Score=59.87 Aligned_cols=142 Identities=12% Similarity=0.071 Sum_probs=78.7
Q ss_pred chHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 231 GSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 231 ~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
....+.|+. ++|+|+...+...+...........+.+++.+| +|++++..++.....+....+ .+.... ...
T Consensus 41 ~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~--~~~~~~----~~~ 114 (500)
T PRK09584 41 QGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALV--AWSGHD----AGI 114 (500)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH--HHhccc----HHH
Confidence 345777885 589999988887776555545555789999999 599999888876544332222 221111 111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLS 380 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s 380 (412)
+.....+.....|+ +-.....+..+..|++ +++++.+..+...+....+.+.++....+.-.+.....+.
T Consensus 115 l~~~~~l~gig~g~--~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~ 186 (500)
T PRK09584 115 VYMGMATIAVGNGL--FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALS 186 (500)
T ss_pred HHHHHHHHHHhhhc--ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence 11111111123343 3334445555555543 3455677767777766666655554444433344443333
No 182
>TIGR00898 2A0119 cation transport protein.
Probab=97.22 E-value=0.0065 Score=63.15 Aligned_cols=121 Identities=17% Similarity=0.106 Sum_probs=80.1
Q ss_pred HhcCCC---CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHH
Q 015174 239 TQRGLN---PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 239 ~~~gls---~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~ 315 (412)
++.+++ +...|+..+...++.++|+.+.+++.+|+|+++...++.....++.... .+.+ + .. .+...-
T Consensus 117 ~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~--~~~~-~----~~--~~~~~r 187 (505)
T TIGR00898 117 TEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLT--AFSP-N----YT--VFLVFR 187 (505)
T ss_pred EEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHH--HHcc-c----HH--HHHHHH
Confidence 467888 8999999999999999999999999999999998887765443332221 2211 1 11 111122
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN 368 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~ 368 (412)
++.+++.-..-.....+..|.+|+++||++.+..........++...+.....
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 22233443344566677889999999999999886555544444444444333
No 183
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.19 E-value=0.0085 Score=61.24 Aligned_cols=123 Identities=15% Similarity=0.093 Sum_probs=74.7
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+..++....+|.+.||.+||+++..+.+...+. .. ..... .+.+ +..+.+++..++.|....+.......
T Consensus 261 ~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~----~~--l~~~~-~~~~--~~~~~l~l~~~l~g~~~~~~~~~~~~ 331 (418)
T TIGR00889 261 QFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALR----FG--FFAYG-DPEY--FGYALLFLSMIVYGCAFDFFNISGSV 331 (418)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HH--HHHHc-Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666788999999999999988886543221 11 11121 1100 01122333444555555444444333
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHhh------cChhHHHHHHHHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLN-RIDLLCEIAGASLFGILLSK------YEPVTCLKFAAGL 145 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~-~id~v~~llgP~lgG~L~~~------~~~~~~~~~~~~~ 145 (412)
.+ .| .++++ +..+.++... ....++.++||.++|.+.+. +||+.++.+.+..
T Consensus 332 ~i-~~----~~p~~---~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~ 390 (418)
T TIGR00889 332 FV-EK----EVPVH---IRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY 390 (418)
T ss_pred HH-HH----HCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 22 23 45543 7888999997 56788999999999999987 4588776554333
No 184
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.14 E-value=0.023 Score=59.13 Aligned_cols=127 Identities=13% Similarity=0.002 Sum_probs=80.6
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhh
Q 015174 249 GGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIV 328 (412)
Q Consensus 249 G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~ 328 (412)
+...+.-.+|++.|+++.+.+.+|+|++.+............+.......... ..++. .|=...++..-..+..
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~----~e~li--~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPS----FEMLI--LGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhh----HHHHH--HHHHHHHHHhHHHHHH
Confidence 44457778899999999999999999998877776654443333333322211 11222 2322222222236678
Q ss_pred hhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH--HhccCCCchhHHHHHHH
Q 015174 329 GAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA--IIANDVSHFGFLATLSL 381 (412)
Q Consensus 329 ~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~--~~~~~~~~f~~l~~~s~ 381 (412)
+.-+.||.-|++.||.++.....--....++...++ -++-+++..+++.....
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~ 191 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPL 191 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHH
Confidence 888999999999999998887776666666655544 33445555555555543
No 185
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.11 E-value=0.026 Score=59.10 Aligned_cols=150 Identities=16% Similarity=0.078 Sum_probs=87.1
Q ss_pred HHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 233 LMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 233 ~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
....|++ ++|++++..++..+...........+.+++.+| +|++|+..++.....+....+. +.... ...+.
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~--~~~~~----~~ll~ 109 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTG--MSLLK----PDLIF 109 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHH--Hhccc----hhHHH
Confidence 4677876 589999999888888777777777899999999 9999999988775544333332 11111 11111
Q ss_pred HHHHHHHh--hhhhhhhhhhhhHHhhccCCcc--cchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHH
Q 015174 311 FLCLIVLS--RLGHMSYDIVGAQILQTGIPSS--KANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVG 386 (412)
Q Consensus 311 ~~~g~~~s--r~GLw~~dl~~~~l~Q~~vp~~--~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~ 386 (412)
.+.++. +.|+ ..++. ..+.-+..|++ +|++..+......+....+.+.++....+.-.+.+...+...++..
T Consensus 110 --~~~~l~~ig~g~-~~~~~-~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~ 185 (489)
T PRK10207 110 --IALGTIAVGNGL-FKANP-ASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLII 185 (489)
T ss_pred --HHHHHHHhcccc-ccCCH-HHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHH
Confidence 122222 3344 23333 44555555555 5577777777666665555555544443322344444444334444
Q ss_pred HHHHHH
Q 015174 387 AAWMFC 392 (412)
Q Consensus 387 ~~~~~~ 392 (412)
+.+.|.
T Consensus 186 ~~~~~~ 191 (489)
T PRK10207 186 ALLVYF 191 (489)
T ss_pred HHHHHH
Confidence 444444
No 186
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.11 E-value=0.22 Score=51.57 Aligned_cols=355 Identities=15% Similarity=0.112 Sum_probs=165.5
Q ss_pred hhhhcchhccC-CcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhcccc
Q 015174 13 GPLVGKLMDHS-PRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDW 91 (412)
Q Consensus 13 g~~~G~~vDr~-~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDw 91 (412)
....|.+.||. ++||++...-+ .+++--. +..... ..+ ...+++...++.+..-++.. +..++.=|
T Consensus 78 ~i~GG~laDr~LG~~~tI~lGai----l~~iGh~--~L~~~~--~~~---~~gl~i~L~~I~iG~Gl~K~-NiS~llg~- 144 (498)
T COG3104 78 PIIGGWLADRVLGTRRTIVLGAI----LMAIGHL--VLAISS--VSG---PGGLYIGLALIIVGTGLFKP-NISSLLGE- 144 (498)
T ss_pred HHHHHHHHHHhcchhHHHHHHHH----HHHHHHH--HHhccc--ccc---ccHHHHHHHHHHhccccccc-cHHHHHHH-
Confidence 55677888999 67666544422 1121111 111111 000 11345545555555555543 33333334
Q ss_pred eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Q 015174 92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVMIILTWFTNKISSGVLDRA 171 (412)
Q Consensus 92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~~~~~l~~~ 171 (412)
+++++++ ++++.++..=..+-+..+++|.+.|++....||+.+|...+.--..++...+ ..+|-......++
T Consensus 145 ---ly~~~Dp-rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~----~~~r~~~~~~~~~ 216 (498)
T COG3104 145 ---LYPKDDP-RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFL----LGRRHVKGIGGVP 216 (498)
T ss_pred ---hcCCCCc-ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH----HccchhcCCCCCC
Confidence 6776666 6888888888888899999999999999999999987643332233332221 1111110010000
Q ss_pred cccccccCCCCCCCCCCchhhh-----H--------HhHH--------HHHHh-HHHHhcCC--------cchH--HHHH
Q 015174 172 KCSQSCCRTSNEGPVPDADNIV-----D--------VGIE--------AIKLG-WKEYMQQP--------VLPA--SLAY 219 (412)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~--------~~~~g-~~~~~~~~--------v~~~--~~~~ 219 (412)
+.. .. ..++ ..+.-.+.. . ..++ .+..+ .+.-++++ .+.. .+..
T Consensus 217 ~~~--~~-~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~ 292 (498)
T COG3104 217 DPN--PL-SFNF-LLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLF 292 (498)
T ss_pred Ccc--ch-hhhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHH
Confidence 000 00 0000 000000000 0 0000 00000 01112221 1222 4455
Q ss_pred HHHHHHhhhccchHHHHHHHh---cC-C-CCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhh-------HHHHHHHHHH
Q 015174 220 VLLCLNVVLTPGSLMTAFLTQ---RG-L-NPSIIGGFSGLCASMGVAATFLSAYLVRRLGILK-------AGAAGLIFQA 287 (412)
Q Consensus 220 a~l~~t~v~~~~~~~~~y~~~---~g-l-s~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r-------~~~~~~~~~~ 287 (412)
+.+|.+.-....+....|..+ ++ + -+---+++.+.+.+.-++.+-+..++..+++.++ ..-.+.....
T Consensus 293 ~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g 372 (498)
T COG3104 293 AVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAG 372 (498)
T ss_pred HHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHH
Confidence 666633223345567778753 33 1 1122357789999999999888888877755541 1112222111
Q ss_pred -HHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH-
Q 015174 288 -SLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAI- 365 (412)
Q Consensus 288 -~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~- 365 (412)
..+++.....+.+.++...++.+.+.+.++..+|=-..|.+-.+..-+..|++..+.+.|..-.-+..-..+...+..
T Consensus 373 ~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 373 LGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 111221122333322223343333334333344422344444455666679988888877765555443333332222
Q ss_pred ------hccCCCchhHHHHHHHHHHHHHHHHHH
Q 015174 366 ------IANDVSHFGFLATLSLLSVVGAAWMFC 392 (412)
Q Consensus 366 ------~~~~~~~f~~l~~~s~~~v~~~~~~~~ 392 (412)
......+-..-+.+....+..+.+++.
T Consensus 453 ~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~ 485 (498)
T COG3104 453 TAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLL 485 (498)
T ss_pred ccccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 122222333334444445666666665
No 187
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.06 E-value=0.023 Score=57.19 Aligned_cols=57 Identities=14% Similarity=0.048 Sum_probs=48.7
Q ss_pred ccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 015174 229 TPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 285 (412)
Q Consensus 229 ~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~ 285 (412)
.+...++.|+++ +|+|+.+.|+..+...++...+....+++.+|+|++|....+...
T Consensus 20 ~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~ 77 (396)
T TIGR00882 20 AYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISG 77 (396)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 344456778764 799999999999999999999999999999999999988766543
No 188
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.06 E-value=0.02 Score=57.39 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015174 210 QPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 276 (412)
Q Consensus 210 ~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~ 276 (412)
||.......+-..+++ ...+....+.|++++|.|+.++|+..++..++.+++..+.+++.+|+|++
T Consensus 4 ~~~~~~~~~~~~~~~~-~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~ 69 (382)
T PRK11128 4 QPTRWLALSYFGYFFA-YGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQL 69 (382)
T ss_pred cccHHHHHHHHHHHHH-HHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcch
Confidence 4444444333333332 12334456789999999999999999999999999999999999999984
No 189
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=96.97 E-value=0.02 Score=59.11 Aligned_cols=119 Identities=15% Similarity=0.121 Sum_probs=73.6
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH---
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF--- 310 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l--- 310 (412)
...+..+.|.+++.+|+..+...++..++..+.+++.+|+|+++....+..........+ .+.. . ....++
T Consensus 42 ~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~---~~~l~~~~~ 115 (455)
T TIGR00892 42 FKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILA--SFSS-N---VIELYLTAG 115 (455)
T ss_pred HHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHH--HHhh-h---HHHHHHHHH
Confidence 444556799999999999999999889999999999999999998876654322211111 2211 1 111111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
++.|+ ..|. .+..+ ..+.-+.. +++||++.|..++.++....+...++
T Consensus 116 ~l~G~---~~~~-~~~~~-~~~~~~~~-~~~r~~a~g~~~~~~~~g~~~~~~l~ 163 (455)
T TIGR00892 116 FITGL---GLAF-NFQPS-LTMLGKYF-YRRRPLANGLAMAGSPVFLSTLAPLN 163 (455)
T ss_pred HHHHh---cchh-hhhHH-HHHHHHHH-HhhHHHHHHHHHhcccHHHHHHHHHH
Confidence 11122 2222 12233 23334444 57899999999988887555444443
No 190
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.92 E-value=0.073 Score=55.64 Aligned_cols=130 Identities=18% Similarity=0.148 Sum_probs=77.6
Q ss_pred hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh-----chhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCc
Q 015174 232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL-----GILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQ 305 (412)
Q Consensus 232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~-----g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~ 305 (412)
...+.|.++.|.|.+++|.+ +..+... .+.++.+++..|+ |++|. +.++...-..+ .....+..+. . .
T Consensus 33 ~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~--~~~~a~~~~~-~-~ 106 (491)
T PRK11010 33 GTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVA--IAAMGFLEPG-T-Q 106 (491)
T ss_pred HHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHH--HHHHHHcCCc-c-h
Confidence 35677888899999999997 2233332 5789999999999 88775 33333221111 1111222211 1 1
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
... +....+ +..++--..|.....+..|..|+++||+.++....-.....++...+.....+
T Consensus 107 l~~-l~~~~~-l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~ 168 (491)
T PRK11010 107 LRW-LAALAV-VIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD 168 (491)
T ss_pred HHH-HHHHHH-HHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 111111 11222335888888999999999999999999988877755555554444433
No 191
>PTZ00207 hypothetical protein; Provisional
Probab=96.90 E-value=0.047 Score=58.37 Aligned_cols=116 Identities=9% Similarity=0.068 Sum_probs=71.1
Q ss_pred HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
.+++|+|..+++.+.+.+...+ .+.+..+++..|+|++++..++.....+....+... ..+.. ..+...+....++
T Consensus 54 ~~~lgls~~~l~~i~svg~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala-~~~~i--~~s~~~l~l~r~l 129 (591)
T PTZ00207 54 QARYNLTQRDLSTITTVGIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT-FQEVI--EGSVVRLSVYNGL 129 (591)
T ss_pred HHHhCcCHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH-hcccc--cCcHHHHHHHHHH
Confidence 3468999999999988765555 355678999999999999888866433322222111 11110 0112222112223
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l 358 (412)
.++|--.++........++. |++||++.|+..+...+-..
T Consensus 130 ~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHHHHH
Confidence 33444335555556666665 57899999999998887554
No 192
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=96.79 E-value=0.091 Score=53.65 Aligned_cols=119 Identities=9% Similarity=-0.044 Sum_probs=69.2
Q ss_pred CCCCch---hHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcC-cchHHHHHHHHHH
Q 015174 242 GLNPSI---IGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQ-QNPLLFFLCLIVL 317 (412)
Q Consensus 242 gls~~~---~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~-~~~~~l~~~g~~~ 317 (412)
+.++.. .+..++.+.++..+|+++.+++.+|+|++|+..++..........+ .+.++-... ......+...=++
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R~l 133 (432)
T PRK10406 56 GNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVI--ACLPGYETIGTWAPALLLLARLF 133 (432)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH--hhcCCchhHHHHHHHHHHHHHHH
Confidence 455553 4455666677777999999999999999999888776433222221 222211000 0011112122222
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLG 362 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~ 362 (412)
.++|.-..-.....+..|..|+++||+..+.....+..-.++...
T Consensus 134 ~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 134 QGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 233332234456678888999999999998877666554444433
No 193
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=96.79 E-value=0.019 Score=58.17 Aligned_cols=121 Identities=14% Similarity=0.117 Sum_probs=71.2
Q ss_pred HHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH----hchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 237 FLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 237 y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R----~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
|.++.|+|+...|++.....+...+...+.+++..| +|++|- +.++... ..+.....++.++.+.......+
T Consensus 26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIP---FSIVLVLLFTTPDFSATGKLVYA 102 (437)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHH---HHHHHHHHHhCCCCCcchHHHHH
Confidence 344689999999999999999999999999999887 555443 4444332 11122222222221111111122
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
.........+.-.++.....+.-+.+ ++++|++.++..+...+...++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~ 152 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLV 152 (437)
T ss_pred HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112223333335566666666655 57899999999887776644443
No 194
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=96.64 E-value=0.15 Score=51.66 Aligned_cols=116 Identities=16% Similarity=0.067 Sum_probs=75.4
Q ss_pred chHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHH
Q 015174 231 GSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLF 310 (412)
Q Consensus 231 ~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l 310 (412)
.++.+--.+++|+|+...|...+.-+.+..+|+.+-..+.+|+.++|.+++....-...-+++ .+.+ + ...
T Consensus 33 ~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~--alAp-~----f~~-- 103 (394)
T COG2814 33 VGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLS--ALAP-S----FAV-- 103 (394)
T ss_pred HhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH--HHhc-c----HHH--
Confidence 345666678899999999999999999999999999999999999888775544211111111 2221 1 111
Q ss_pred HHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015174 311 FLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 311 ~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
++.+=+++.+..-.|=-....+--+.+||++|||+-|+..+=...
T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tl 148 (394)
T COG2814 104 LLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTL 148 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHH
Confidence 111211111111113344555666788999999999888766655
No 195
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.64 E-value=0.041 Score=57.43 Aligned_cols=126 Identities=12% Similarity=0.101 Sum_probs=81.4
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHHHHHHHHHHHHHHHHHHHHhcCCC------
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAGAAGLIFQASLLAMAVAVYWSGSL------ 302 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~------ 302 (412)
..+.|++++|+++...+.+..++.+.+++...+.+.+.. |+|++|..+++...-... ......+.....
T Consensus 26 ~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~-~l~ll~~~~~~~~~~~~~ 104 (477)
T TIGR01301 26 LLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAF-AVILIGFAADIGHLFGDN 104 (477)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHH-HHHHHHhCchhhhhcccc
Confidence 355688889999999999999999999999999999998 599999876543321111 111111111000
Q ss_pred ----cCcchHHHHHHHHHHhhhhhhhhhhh-------hhHHhhccCCcccc--hhHHHHHHHHHHHHHHHHHHHHHh
Q 015174 303 ----SQQNPLLFFLCLIVLSRLGHMSYDIV-------GAQILQTGIPSSKA--NLIGTTEISVASLVESVMLGVAII 366 (412)
Q Consensus 303 ----~~~~~~~l~~~g~~~sr~GLw~~dl~-------~~~l~Q~~vp~~~~--G~v~g~~~sl~~~~~ll~~~~~~~ 366 (412)
........++. |+|..|.+ ...+.-+.+|+++| +++++.++.+...-..+.+.++..
T Consensus 105 ~~~~~~~~~i~~~~i-------~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 105 LDKKTKPRAIIVFVV-------GFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred ccccchhHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00011122333 44444443 34556777887754 789999998888877777777654
No 196
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.57 E-value=0.062 Score=56.41 Aligned_cols=140 Identities=11% Similarity=-0.009 Sum_probs=95.7
Q ss_pred chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhh
Q 015174 246 SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSY 325 (412)
Q Consensus 246 ~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~ 325 (412)
+..+++-+...++..+|++..+++.+++|+++++..+.....+..+++ .+.. ....+..|=++.++|.-..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~--~~a~-------~~~~l~~GR~l~G~g~G~~ 159 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIII--ALAP-------SWYQLIVGRILTGLGVGGA 159 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH--HHhh-------hHHHHHHHHHHhccchhhh
Confidence 355899999999999999999999999999999988776544333332 2111 1233334555556666557
Q ss_pred hhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCC--CchhHHHHHHHHHHHHHHHHHHHH
Q 015174 326 DIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDV--SHFGFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 326 dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~--~~f~~l~~~s~~~v~~~~~~~~~~ 394 (412)
.....-+.-|..|++.||...+...-....--++.+......++. +-+-++.+..+.++.....++..|
T Consensus 160 ~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 160 SVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred hhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777888888888999999999988777776556666666666654 333344444555555555555544
No 197
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.56 E-value=1.1e-06 Score=89.86 Aligned_cols=121 Identities=13% Similarity=0.066 Sum_probs=66.0
Q ss_pred HhcCCCCc-hhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHH--HHHhcCCCcCcchHHHHHHHH
Q 015174 239 TQRGLNPS-IIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAV--AVYWSGSLSQQNPLLFFLCLI 315 (412)
Q Consensus 239 ~~~gls~~-~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v--~~~~~g~~~~~~~~~l~~~g~ 315 (412)
++.|.++. ... ...++..+++++....+.+|+|+++....+.....++..... ........+......+....+
T Consensus 281 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 357 (451)
T PF00083_consen 281 ENAGISNSFLAT---LILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLAL 357 (451)
T ss_pred cccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeee
Confidence 45677777 222 233355567777788999999998888777654443332221 111111100000111111111
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGV 363 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~ 363 (412)
.....+. .+......+..|..|.+.|++..|...+.+++...+....
T Consensus 358 ~~~~~~~-g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~ 404 (451)
T PF00083_consen 358 FFAFFSL-GWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFL 404 (451)
T ss_pred ccccccc-cccccccccccccccccccccccccccccccccccccccc
Confidence 1112222 2333344566888999999999999999998766554433
No 198
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.52 E-value=0.064 Score=53.78 Aligned_cols=116 Identities=13% Similarity=0.003 Sum_probs=64.0
Q ss_pred hhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHH-HHHHHHHhhhhhhhhcccc
Q 015174 13 GPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLA-GAVERLTGVALGVAVERDW 91 (412)
Q Consensus 13 g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~l~~~a~~~ai~RDw 91 (412)
....|.++||++++|++..+-+..... . ...+........ . . ..+......+ +.............+.|+
T Consensus 261 ~~~~g~l~~r~g~~~~l~~~~~~~~~~-~--~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~- 331 (390)
T TIGR02718 261 CGGGAWLVRRAGLWRTFILGVGLAGSL-A--LLWFAQAAFWLA--P--G-IAVAWSCSAFGSLITGITSVAIYTAFMRF- 331 (390)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHH-H--HHHHHHHHcccC--C--c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 567899999999999987765544221 1 110111110000 0 1 1111122122 222222222322233332
Q ss_pred eeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHH
Q 015174 92 AVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAA 143 (412)
Q Consensus 92 v~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~ 143 (412)
++++ ++-.+..+..+.+..++..+||.++|.+.+..|++..+.+.+
T Consensus 332 ----~~~~--~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~ 377 (390)
T TIGR02718 332 ----AGDG--DQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGT 377 (390)
T ss_pred ----hCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 2321 156777888888889999999999999999999887766543
No 199
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.028 Score=56.97 Aligned_cols=181 Identities=15% Similarity=0.134 Sum_probs=114.3
Q ss_pred HHhHHHHhcCCcchH-HHHHHHHHHHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHH
Q 015174 201 KLGWKEYMQQPVLPA-SLAYVLLCLNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAG 279 (412)
Q Consensus 201 ~~g~~~~~~~~v~~~-~~~~a~l~~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~ 279 (412)
.+-|+.+ |-.+|.. -++++..|++ =-.|+-.++...++.|+|.+++|++-++-.+..=++-++.+.+..|.+.++-+
T Consensus 20 ~~~y~~~-r~qif~~~fiGYa~fYl~-RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm 97 (448)
T COG2271 20 DKTYKRW-RIQIFLSIFIGYAAFYLT-RKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFM 97 (448)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHH-HHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceee
Confidence 3445544 3345555 5578899965 24444445555567789999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhh-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHH
Q 015174 280 AAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGH-MSYDIVGAQILQTGIPSSKANLIGTTEISVASLVES 358 (412)
Q Consensus 280 ~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GL-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l 358 (412)
..++..-.+ ..+..... .++.++..-.++.+.-- |.++ .....+-..-|.+|||+.-++-+.-.|.-+.
T Consensus 98 ~~gLilsai---~nil~Gfs------~s~~~~~~l~~lng~fQg~Gwp-p~~~~i~~Wfsr~eRG~~~siWn~shNiGGa 167 (448)
T COG2271 98 AFGLILSAI---VNILFGFS------PSLFLFAVLWVLNGWFQGMGWP-PCARTITHWFSRKERGTWWSIWNTSHNIGGA 167 (448)
T ss_pred hHHHHHHHH---HHHHHhhh------hHHHHHHHHHHHHHHHhcCCCc-HHHHHHHHHcCccccCceEEEehhhhhcccc
Confidence 777764322 22222111 12222211111111110 1233 3344556677999999999999999998666
Q ss_pred HHHHHH---HhccCCCchhHHHHHHHHHHHHHHHHHHH
Q 015174 359 VMLGVA---IIANDVSHFGFLATLSLLSVVGAAWMFCH 393 (412)
Q Consensus 359 l~~~~~---~~~~~~~~f~~l~~~s~~~v~~~~~~~~~ 393 (412)
+...++ ......+-......-++.++..+.+++..
T Consensus 168 l~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 168 LAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred hHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHH
Confidence 666555 33344455555555666666666666553
No 200
>PRK15075 citrate-proton symporter; Provisional
Probab=96.45 E-value=0.17 Score=51.65 Aligned_cols=124 Identities=12% Similarity=-0.023 Sum_probs=70.5
Q ss_pred HHHHHHhcCCCCchhHHHh------hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc--
Q 015174 234 MTAFLTQRGLNPSIIGGFS------GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ-- 305 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~------~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~-- 305 (412)
.+...++++.++.+.+.+. +.+.++...|++..+++.+|+|++|...++.....+....+ .+.++. ...
T Consensus 38 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~--~~~~~~-~~~~~ 114 (434)
T PRK15075 38 ATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLI--AFVPGY-ATIGL 114 (434)
T ss_pred HHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHH--HhCCcH-HHHHH
Confidence 3333457898888776543 22233334688999999999999999887765432222221 222211 000
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
.....+..+-++.++|.-........+..|..|+++||++.+.....++....+.
T Consensus 115 ~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g 169 (434)
T PRK15075 115 AAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFA 169 (434)
T ss_pred HHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHH
Confidence 0000112222233333322223345678899999999999999888776544433
No 201
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.41 E-value=0.026 Score=61.01 Aligned_cols=134 Identities=16% Similarity=0.057 Sum_probs=94.2
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHH-hcCCC----------
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVY-WSGSL---------- 302 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~-~~g~~---------- 302 (412)
.+..-++.++++.+.|++.+..-++..++.+..+++.+|.|+.|.+.++.....+..++...+. ..++-
T Consensus 56 l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 56 LTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred chhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccc
Confidence 3334457899999999999999999999999999999999999988777654333322222221 11100
Q ss_pred --c---------------------------C--cchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHH
Q 015174 303 --S---------------------------Q--QNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEIS 351 (412)
Q Consensus 303 --~---------------------------~--~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~s 351 (412)
+ . .....+++.+-++.++|.-..-.....++.+++|+++|++..|...+
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~ 215 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILES 215 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHH
Confidence 0 0 01233444566666666655556667888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 015174 352 VASLVESVMLGVAIIA 367 (412)
Q Consensus 352 l~~~~~ll~~~~~~~~ 367 (412)
.......+.+.++...
T Consensus 216 ~~~iG~~lG~llgg~l 231 (633)
T TIGR00805 216 IAVFGPAFGYLLGSFC 231 (633)
T ss_pred HHHhhhHHHHHHHHHH
Confidence 9988777777776543
No 202
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=96.40 E-value=0.14 Score=51.23 Aligned_cols=47 Identities=21% Similarity=0.251 Sum_probs=41.7
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 276 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~ 276 (412)
+.+..+.|++++|+|+.++|+..+...+....+..+.+.+.+|+|+.
T Consensus 23 ~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~ 69 (382)
T TIGR00902 23 FLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHI 69 (382)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 34457788999999999999999999999999999999999999863
No 203
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.32 E-value=0.16 Score=54.36 Aligned_cols=133 Identities=16% Similarity=0.112 Sum_probs=79.7
Q ss_pred HhcCCcchHHHHHHHH-HHHh--hhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHH
Q 015174 207 YMQQPVLPASLAYVLL-CLNV--VLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG 282 (412)
Q Consensus 207 ~~~~~v~~~~~~~a~l-~~t~--v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~ 282 (412)
|++.|.+.+.++...+ +... +....+-...|+. +.|=++ ...++-....++.-.+..+.+++...+|++.....+
T Consensus 36 ~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g 114 (599)
T PF06609_consen 36 YYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIG 114 (599)
T ss_pred ceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Confidence 4577888776542222 2110 1222222234665 577654 478888888888888889999999999997776655
Q ss_pred HHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHH
Q 015174 283 LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI 350 (412)
Q Consensus 283 ~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~ 350 (412)
..+ ..+..+..... ..+-.+..|.++.++|- ..........+|.+|.+.|+...+...
T Consensus 115 ~~l---~vvG~Iv~atA------~~~~~~iag~~l~Gvga-G~~~~~~~~isEl~p~k~R~~~~~~~~ 172 (599)
T PF06609_consen 115 SLL---GVVGSIVCATA------QNMNTFIAGMVLYGVGA-GVQELAALAISELVPNKWRGLGLAIAS 172 (599)
T ss_pred HHH---HHhHHHHhhcC------CcHHHHHHHHHHHHHhh-HHHHHHHHHHHHhcccchhhhHhHHHH
Confidence 443 22222111111 12333445666667665 444455556899999998887665444
No 204
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.28 E-value=0.11 Score=53.92 Aligned_cols=123 Identities=15% Similarity=0.125 Sum_probs=75.1
Q ss_pred HHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcch
Q 015174 234 MTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNP 307 (412)
Q Consensus 234 ~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~ 307 (412)
...|.+ ..|+|+..+|.++.+.-+-......+.+.+.. |+|++|- ++++.... .+.....+.+...+....
T Consensus 29 l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~---~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 29 LMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLAN---SVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHH---HHHHHHHHcCCCCCccHH
Confidence 344554 57999999999999988888888888888877 5688554 44443322 222122232221111111
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHH
Q 015174 308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESV 359 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll 359 (412)
...+.....+..++.-.+++....+.-+.+ ++++|.++++..+...+....+
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~ 158 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFV 158 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222334455567888888888877 6899999999876666554333
No 205
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.19 E-value=0.15 Score=50.15 Aligned_cols=119 Identities=10% Similarity=-0.031 Sum_probs=68.8
Q ss_pred CCCchhHHHhhH-----HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCc--chHHHHHHHH
Q 015174 243 LNPSIIGGFSGL-----CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQ--NPLLFFLCLI 315 (412)
Q Consensus 243 ls~~~~G~~~~~-----~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~--~~~~l~~~g~ 315 (412)
.++++.|...+. +-++..+|+.+.+++.+|+|++|....+.....+....+ .+.+ +.... ....++..+-
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~r 103 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI--GLLP-SYATIGIWAPILLLLAR 103 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH--hhCC-ChhhhHHHHHHHHHHHH
Confidence 556777775544 333445788999999999999999887765433322221 2222 10000 0011122222
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
++.++|.-........+.-+..|+++||+.++...........+...+.
T Consensus 104 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 104 LIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred HHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 2333333224455566777888999999999998887776555544443
No 206
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.12 E-value=1.6 Score=44.96 Aligned_cols=192 Identities=12% Similarity=0.046 Sum_probs=104.1
Q ss_pred HHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHH---HhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh
Q 015174 200 IKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFL---TQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL 276 (412)
Q Consensus 200 ~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~---~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~ 276 (412)
..++.+..++++.|.-.+..-. +. ...|.++.+..- .-.|++...-|.......++|++|+.+.+.+..|.+.-
T Consensus 255 f~~si~~~~~n~~F~il~~~yg--i~-~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~f 331 (480)
T KOG2563|consen 255 FPKSIKSCFKNRQFIILAICYG--IG-LGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKF 331 (480)
T ss_pred HHHHHHHHHcCccHHHHHHHHh--hh-HHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhH
Confidence 4567888899988765221111 11 122333344332 24688888889999999999999999999998887765
Q ss_pred hHHH-HHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH
Q 015174 277 KAGA-AGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 277 r~~~-~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
|... +....-..+ .++.......+ ...++++..+....-.+.-.++ .-..+--|.+.|..=|.-+|+.+..-+.
T Consensus 332 k~~~~v~~~~~~v~-~~~l~~~t~~~---~~~viv~~t~~~~g~~~~~~~P-ig~ElgvE~TyPv~E~tSsGll~~~gq~ 406 (480)
T KOG2563|consen 332 KLTTLVLYLFALVG-TLMLLTCTLFL---GDSVIVFTTCGLLGFFGTGYLP-IGFELGVETTYPVAEGTSSGLLNLSGQI 406 (480)
T ss_pred HHHHHHHHHHHHHH-HHHHHHhhccC---CceEehhhhHHHHHHhhcCCCC-cceeeeeeeccccCCcccceeEEeehhH
Confidence 5433 222221111 11111211221 1122222221111111221233 3334445666555555556666666665
Q ss_pred -HHHHHHHHHHhccCCC----chhHHHHHHHHHHHHHH-HHHHHHhcCCC
Q 015174 356 -VESVMLGVAIIANDVS----HFGFLATLSLLSVVGAA-WMFCHWLLNPT 399 (412)
Q Consensus 356 -~~ll~~~~~~~~~~~~----~f~~l~~~s~~~v~~~~-~~~~~~~~~~~ 399 (412)
.-..-+.+.....+++ +++..+.+....++... ..++.+.+|++
T Consensus 407 f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 407 FGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred HHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 4444555677778888 88888888777665444 34444444433
No 207
>PRK09952 shikimate transporter; Provisional
Probab=96.01 E-value=0.28 Score=50.25 Aligned_cols=116 Identities=9% Similarity=-0.004 Sum_probs=65.7
Q ss_pred CCCCchhHHHh-----hHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc-CcchHHHHHHHH
Q 015174 242 GLNPSIIGGFS-----GLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS-QQNPLLFFLCLI 315 (412)
Q Consensus 242 gls~~~~G~~~-----~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~-~~~~~~l~~~g~ 315 (412)
+.++. .|... +++-++..+|+++.+++.+|+|++|....+......+...+ .+.+.-.. .......+...=
T Consensus 56 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R 132 (438)
T PRK09952 56 QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALI--GLLPSFSTIGWWAPVLLVTLR 132 (438)
T ss_pred CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHH
Confidence 67777 56653 34445567899999999999999999887765433322221 22221100 000011111222
Q ss_pred HHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 316 VLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 316 ~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
++.++|.-..-.+...+..|..|+++||++++....-.....++.
T Consensus 133 ~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 133 AIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 222333322334456778889999999999887766555444333
No 208
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.91 E-value=0.36 Score=52.56 Aligned_cols=81 Identities=12% Similarity=0.239 Sum_probs=64.1
Q ss_pred hHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHH-HHHHHHHHHHHHh
Q 015174 196 GIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGV-AATFLSAYLVRRL 273 (412)
Q Consensus 196 ~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggl-lGt~l~~~l~~R~ 273 (412)
..++...-.+.+++||++.-......+....+.++-..++=|++ +.|.|++.--.+.|..++.+. +|.++.+++.||+
T Consensus 377 ~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 377 KIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 45677778889999999998666666664334666666778997 579999999999977766655 8999999999998
Q ss_pred chh
Q 015174 274 GIL 276 (412)
Q Consensus 274 g~~ 276 (412)
.+.
T Consensus 457 kl~ 459 (735)
T KOG3626|consen 457 KLS 459 (735)
T ss_pred ccc
Confidence 775
No 209
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=95.83 E-value=0.57 Score=48.74 Aligned_cols=101 Identities=9% Similarity=-0.047 Sum_probs=61.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc--CcchHHHHHHHHHHhhhhhhhhhhhh
Q 015174 252 SGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS--QQNPLLFFLCLIVLSRLGHMSYDIVG 329 (412)
Q Consensus 252 ~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~--~~~~~~l~~~g~~~sr~GLw~~dl~~ 329 (412)
+++.-++..+|+++.+++.+|+|++|+..++.....+....+ .+.++-.. .+.+. ++..+=++.++|.-..-.+.
T Consensus 63 ~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~--a~~~~~~~~g~~a~~-~l~~~R~l~G~g~g~~~~~~ 139 (490)
T PRK10642 63 FSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCI--GLIPSYATIGIWAPI-LLLLCKMAQGFSVGGEYTGA 139 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH--HhcccHHHHHHHHHH-HHHHHHHHHHhHhHhhHHHH
Confidence 567778888999999999999999999988876543332222 22221100 00011 11122222233332233456
Q ss_pred hHHhhccCCcccchhHHHHHHHHHHH
Q 015174 330 AQILQTGIPSSKANLIGTTEISVASL 355 (412)
Q Consensus 330 ~~l~Q~~vp~~~~G~v~g~~~sl~~~ 355 (412)
..+..|..|+++||++.+........
T Consensus 140 ~~~~~e~~p~~~Rg~~~~~~~~~~~~ 165 (490)
T PRK10642 140 SIFVAEYSPDRKRGFMGSWLDFGSIA 165 (490)
T ss_pred HHHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 67888899999999998887655443
No 210
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.76 E-value=1.1 Score=42.63 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=85.1
Q ss_pred HHHHH---HH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 233 LMTAF---LT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 233 ~~~~y---~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
..-.| +| .+|+|.+++-.+-..+-+|+-+| +..+.+..|+|...+..+|...... .-...-....+..+ ..+.
T Consensus 20 ~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~-GY~~~~l~~~~~i~-~~~~ 96 (250)
T PF06813_consen 20 TFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFV-GYGLLWLAVSGRIP-SLPV 96 (250)
T ss_pred chhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHH-HHHHHHHHHhCccC-ccch
Confidence 34445 44 48999999999999999998876 8889999999998887777653322 22222222233221 0111
Q ss_pred HHHHHHHHHhhhhhhhhhh-hhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDI-VGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLS 383 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl-~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~ 383 (412)
..+..-..+...|--.+|. +...-.+. .|++||++.|+.-+..-+.+.+-..+--.+..+++-..+...++..
T Consensus 97 ~~~~~~~~l~~~s~~~~~ta~lvt~~~N--FP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~ 170 (250)
T PF06813_consen 97 WLMCLFLFLGGNSSCWFNTASLVTCVRN--FPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLP 170 (250)
T ss_pred HHHHHHHHHHcccHHHhhhHHHHHHHHh--CccccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 1111111222333312343 34445555 5678999999999988876555555533333335445555555443
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=95.72 E-value=0.15 Score=52.34 Aligned_cols=121 Identities=10% Similarity=0.074 Sum_probs=71.0
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH----hchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcch-
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR----LGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQNP- 307 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R----~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~~- 307 (412)
++.|.+..|+|+...|.++.+..+...+...+.+.+..| +|++|- +.++... ..+.....++.+..+....
T Consensus 33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~---~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIP---FGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHH---HHHHHHHHHhCCCCCcchHH
Confidence 333445699999999999999998888888888888776 666554 3334322 1122222233322111111
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHH
Q 015174 308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVES 358 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~l 358 (412)
.+.+...+. ...+...+++....+.-|.+ ++++|++.++......+....
T Consensus 110 ~~~~~~~~l-~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~ 160 (444)
T PRK09669 110 IYACVTYIL-LSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGL 160 (444)
T ss_pred HHHHHHHHH-HHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 222222222 23344457777777766665 668899988887766665333
No 212
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.71 E-value=0.65 Score=47.05 Aligned_cols=130 Identities=12% Similarity=0.062 Sum_probs=90.1
Q ss_pred ccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 229 TPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 229 ~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
..|.+.+-+.+..+++..+.+++.-+-=.|..++++-++++.||+|.++.+..|+.. +.+.| ..+||-+ .....
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l---~avg~-~lF~pAa--~~~~y 104 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLL---YAVGA-ALFWPAA--SSKSY 104 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHH---HHHHH-HHHhhhh--hhhhH
Confidence 345555556667999999999999999999999999999999999999998888763 32332 2233211 11234
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
..|+.++.....|+-..+.+.+.++-..-||+...+=-....+.|.+-..+.+..+
T Consensus 105 ~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g 160 (422)
T COG0738 105 GFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLG 160 (422)
T ss_pred HHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHH
Confidence 45555666666677779999988888877776555555555566665555555444
No 213
>PTZ00207 hypothetical protein; Provisional
Probab=95.60 E-value=2.1 Score=45.90 Aligned_cols=116 Identities=11% Similarity=-0.046 Sum_probs=67.4
Q ss_pred HhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccc
Q 015174 11 VGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERD 90 (412)
Q Consensus 11 l~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RD 90 (412)
.+.++.|.+.||++||+++..+.+.-.+. +....+..... ... ..+.+++.-++.|..+..++++....+.+
T Consensus 76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG----~ll~ala~~~~-i~~--s~~~l~l~r~l~G~G~~~~~~~~~~~i~~- 147 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLG----TLLFALTFQEV-IEG--SVVRLSVYNGLMTLGCMLFDLGAVVTVLS- 147 (591)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHH----HHHHHHHhccc-ccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 34558899999999999988876544322 22111111110 000 11334444456666666666666666654
Q ss_pred ceeeecCCCchhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcChhHHHHHHHH
Q 015174 91 WAVLLAGINRPIALAKANAVLNRIDLLCE-IAGASLFGILLSKYEPVTCLKFAAG 144 (412)
Q Consensus 91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~-llgP~lgG~L~~~~~~~~~~~~~~~ 144 (412)
|.| + +-.++.+.+.....++. +++|...+.+. .+|...+++.+.
T Consensus 148 ~Fp----~----~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~v 192 (591)
T PTZ00207 148 VFP----S----NRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMS 192 (591)
T ss_pred hCh----h----hhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHH
Confidence 654 3 23668888888888887 46666666654 356665555433
No 214
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.52 E-value=0.25 Score=51.51 Aligned_cols=115 Identities=14% Similarity=0.017 Sum_probs=77.7
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
+.+.++.+-|++++..+.|.+++.+-.+.+.+|+|.+++..++.....+. ..+.+...... ...+++ .=++.+
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~--t~l~P~aa~~~--~~~~~~---~R~lqG 139 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALL--TLLTPLAASIG--FYLLLV---LRFLQG 139 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHH--HHHHHHHHHhc--chhhHH---HHHHhH
Confidence 47889999999999999999999999999999999999988776543322 11112221110 011111 111122
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVML 361 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~ 361 (412)
++.-.-=.+...+..++.|++||++..++..+-.+...++..
T Consensus 140 l~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~m 181 (466)
T KOG2532|consen 140 LGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITM 181 (466)
T ss_pred HHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233223356778889999999999999999888876544444
No 215
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.47 E-value=0.055 Score=41.80 Aligned_cols=51 Identities=29% Similarity=0.390 Sum_probs=46.1
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGL 283 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~ 283 (412)
-...|.+++|+|+.++|++.++.-...++++.+.+.+.+|.+..|......
T Consensus 22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 466788899999999999999999999999999999999999998876543
No 216
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.43 E-value=0.004 Score=65.95 Aligned_cols=80 Identities=19% Similarity=0.308 Sum_probs=0.0
Q ss_pred hHHHHHHhHHHHhcCCcchHHHH-HHHHHHHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHH-HHHHHHHHHHHHHHH
Q 015174 196 GIEAIKLGWKEYMQQPVLPASLA-YVLLCLNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCAS-MGVAATFLSAYLVRR 272 (412)
Q Consensus 196 ~~~~~~~g~~~~~~~~v~~~~~~-~a~l~~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~av-ggllGt~l~~~l~~R 272 (412)
..++.....+.+++||+|.-... ...-++. +.++.+..+=|++ +.+++++.-.++.|...+ ++.+|.++.+.+.||
T Consensus 290 ~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~-~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk 368 (539)
T PF03137_consen 290 SIKDFPKALKRLLTNPVFMCLILAGVFESFI-VSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK 368 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE
Confidence 45667778888999999998443 3333343 4677777888997 579999999999977766 677999999999999
Q ss_pred hchh
Q 015174 273 LGIL 276 (412)
Q Consensus 273 ~g~~ 276 (412)
++..
T Consensus 369 ~kl~ 372 (539)
T PF03137_consen 369 FKLS 372 (539)
T ss_dssp ----
T ss_pred ecCc
Confidence 9875
No 217
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.37 E-value=3.6 Score=41.65 Aligned_cols=129 Identities=16% Similarity=0.113 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhh
Q 015174 255 CASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQ 334 (412)
Q Consensus 255 ~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q 334 (412)
....+.=|.+++..++.|+|+++++...+..-.+++.+. ....++ .....++|.+-.+.|. .|. .....-
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll--~~c~~r--n~~tvllf~arafisg----~fq--vaYvYt 459 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLL--TTCKTR--NAYTVLLFTARAFISG----AFQ--VAYVYT 459 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHH--HHhcCc--chhHHHHHHHHHHHhc----hhe--EEEEec
Confidence 455677888999999999999999886665332222221 111122 2233445543222222 111 222233
Q ss_pred ccC-CcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHH
Q 015174 335 TGI-PSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 335 ~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~~~ 394 (412)
+.| |...|+..-|+-.+++...+++.+.+.+........++.+.- .++++++.+.-++|
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~-~~~ilagIavcffP 519 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYG-ALFILAGIAVCFFP 519 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHH-HHHHHHHHHheeee
Confidence 344 778999999999999999999999888777777777776654 45566666666666
No 218
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=95.26 E-value=0.096 Score=53.50 Aligned_cols=68 Identities=21% Similarity=0.166 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhhhccchHHHHHHHh-cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 216 SLAYVLLCLNVVLTPGSLMTAFLTQ-RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 216 ~~~~a~l~~t~v~~~~~~~~~y~~~-~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
+..+-..|++ -..+-+....|+++ .|+|++++|.+++.+++..++...+++.+..|+|.+|..++.+.
T Consensus 13 s~~~f~~Ff~-~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~ 81 (412)
T PF01306_consen 13 SLFYFFYFFI-WGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIA 81 (412)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHH
Confidence 3334444444 24445567778875 89999999999999999999999999999999999998876654
No 219
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.22 E-value=4.2 Score=41.59 Aligned_cols=234 Identities=12% Similarity=0.018 Sum_probs=118.1
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHH--HHHHHHHHHhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLV--LAGAVERLTGVALG 84 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~g~~~~l~~~a~~ 84 (412)
=+++.+-.++.-+-|..+-|++++..-+.+.+ .-. +..++.. + ....+.=+ ..+.+..++..+
T Consensus 52 YSyl~~l~~vflltd~l~Ykpviil~~~~~i~----t~~--lll~~~s------v-~~mq~~q~~yg~~~a~evay~s-- 116 (412)
T PF01770_consen 52 YSYLAFLLPVFLLTDYLRYKPVIILQALSYII----TWL--LLLFGTS------V-LAMQLMQFFYGLATAAEVAYYS-- 116 (412)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH----HHH--HHHHHCc------H-HHHHHHHHHHHHHHHHHHHHHH--
Confidence 35666777888999999999997776443322 122 2222211 1 11222211 222222222222
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhH--HHHHHHHHHHHHHHHHHHHHHHhhh
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVT--CLKFAAGLIMWSLPVMIILTWFTNK 162 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~--~~~~~~~~~~~s~~~~~~~l~~~~~ 162 (412)
|+=..++++ +-.|+-+..|...++++++|-.+|-++++..+..- ...+..+...+++...+ -
T Consensus 117 ------Yiys~v~~~---~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~-------f 180 (412)
T PF01770_consen 117 ------YIYSVVDKE---HYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIAL-------F 180 (412)
T ss_pred ------HheeecCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-------H
Confidence 333455543 89999999999999999999999999988554332 21221111112221111 1
Q ss_pred ccccc--c--cccccc-----ccccCCCCC---------CCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-----HHHH
Q 015174 163 ISSGV--L--DRAKCS-----QSCCRTSNE---------GPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-----SLAY 219 (412)
Q Consensus 163 ~~~~~--l--~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-----~~~~ 219 (412)
+|.+. . +|.++. +.+.++.++ .+.+..++...+..+.+.+.++..++||.++- +++.
T Consensus 181 LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~at 260 (412)
T PF01770_consen 181 LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFAT 260 (412)
T ss_pred cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 22111 0 111100 000000000 00011111223456667778888889997766 3333
Q ss_pred HHHHHHhhhccchHHHHHHH--hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhch
Q 015174 220 VLLCLNVVLTPGSLMTAFLT--QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGI 275 (412)
Q Consensus 220 a~l~~t~v~~~~~~~~~y~~--~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~ 275 (412)
+.-+. +..+ ....+-+ ..+-....-|.+-++..+.|-++++..+.+..+...
T Consensus 261 cgy~q--v~nY--vQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~ 314 (412)
T PF01770_consen 261 CGYYQ--VINY--VQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR 314 (412)
T ss_pred hHHHH--HHHH--HHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH
Confidence 33332 1111 1222211 134455666777888888888888888888555444
No 220
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.16 E-value=4.9 Score=41.98 Aligned_cols=171 Identities=14% Similarity=0.117 Sum_probs=86.5
Q ss_pred ecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cC-hhHHH-HHHHHHHHHHHHHHHHHHHHhhhccc
Q 015174 95 LAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSK-------YE-PVTCL-KFAAGLIMWSLPVMIILTWFTNKISS 165 (412)
Q Consensus 95 l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~-------~~-~~~~~-~~~~~~~~~s~~~~~~~l~~~~~~~~ 165 (412)
++..+ |..|.-..+.....++.++||.+...+... .+ |...+ .......+... +...+.+...|..
T Consensus 157 i~t~~---qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~-~~~~~~~~l~~~~- 231 (472)
T TIGR00769 157 ITTID---EAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGL-AIILLYWWVNRNV- 231 (472)
T ss_pred cCCHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcc-
Confidence 66643 899999999999999999999998888732 11 21111 11111111111 1111112222211
Q ss_pred cccccccccccccCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchHHHHHHHHHHHhhhccchHHHHHHHhcCCCC
Q 015174 166 GVLDRAKCSQSCCRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPASLAYVLLCLNVVLTPGSLMTAFLTQRGLNP 245 (412)
Q Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~a~l~~t~v~~~~~~~~~y~~~~gls~ 245 (412)
.++++..+++.++ + ++ +......||++..+|+|-++....+..+|-.+....+..--..++++.-++
T Consensus 232 --~~~~~~~~~~~~~-~-k~---------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~ 298 (472)
T TIGR00769 232 --LTDPRSYNPALKE-K-KV---------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSP 298 (472)
T ss_pred --cCCccccchhhcc-c-cC---------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 1111100000000 0 00 012246789999999999999888877782211212222222334444455
Q ss_pred chhHHHh----hHHHHHHHHHHHHHHHHHHHhchhhHHHHHH
Q 015174 246 SIIGGFS----GLCASMGVAATFLSAYLVRRLGILKAGAAGL 283 (412)
Q Consensus 246 ~~~G~~~----~~~avggllGt~l~~~l~~R~g~~r~~~~~~ 283 (412)
..+.-++ ...++..+.--++.+++.||+|-..+..+.-
T Consensus 299 ~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~P 340 (472)
T TIGR00769 299 NEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITP 340 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4444444 3333333344445599999999876655443
No 221
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=94.90 E-value=0.4 Score=48.71 Aligned_cols=115 Identities=17% Similarity=0.082 Sum_probs=74.2
Q ss_pred HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhc-CCCcCcchHHHHHHHHH
Q 015174 238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWS-GSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~-g~~~~~~~~~l~~~g~~ 316 (412)
-++.|+|+.+.+++-+...+.|-+-=+.++.+..|+|-+++...+.. +.++++....+. ..++ . ..++. .|..
T Consensus 41 ~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~---l~~IP~~~~~~a~~~~~-~-~~ll~-~gll 114 (417)
T COG2223 41 KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML---LLLIPCLGLAFAVTYPS-T-WQLLV-IGLL 114 (417)
T ss_pred ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH---HHHHHHHHHHHHccCCc-h-HHHHH-HHHH
Confidence 35699999999999999999999999999999999999988775543 444555443332 2211 1 12222 2333
Q ss_pred HhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHH
Q 015174 317 LSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVM 360 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~ 360 (412)
+ +++=-+|.+.+. ..-+.-|++++|.++|+++.=|.+..+..
T Consensus 115 ~-G~~GasFav~m~-~~s~~fP~~~qG~AlGI~g~GN~G~av~q 156 (417)
T COG2223 115 L-GLAGASFAVGMP-NASFFFPKEKQGLALGIAGAGNLGVAVAQ 156 (417)
T ss_pred H-hcccceehcccc-cccccCChhhhhHHHHHhccccccHHHHH
Confidence 2 112213433332 23455699999999999995454444333
No 222
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.70 E-value=0.14 Score=40.45 Aligned_cols=54 Identities=20% Similarity=0.186 Sum_probs=46.1
Q ss_pred hHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHH
Q 015174 232 SLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIF 285 (412)
Q Consensus 232 ~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~ 285 (412)
.+.+.-.++.++|+++-|++-+.|-+|.++|++...++.+|.+.++....+++.
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~ 66 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLL 66 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 345566678999999999999999999999999999999988777777767654
No 223
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=94.57 E-value=1.6 Score=43.80 Aligned_cols=141 Identities=13% Similarity=0.123 Sum_probs=92.0
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
+.|+|.+..|++-++--+..=+.+...|++.||+|..|....++.. +++....-.. .....+..|-.+.+
T Consensus 41 ~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Lll------i~~G~~iR~~----~~~~~L~~gt~l~G 110 (395)
T COG2807 41 DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLL------IAAGILIRSL----GGLPLLFLGTLLAG 110 (395)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHH------HHHHHHHHhc----ccHHHHHHHHHHHH
Confidence 5899999999999999999999999999999999999998876542 1111211111 11222223544555
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC 392 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~ 392 (412)
.|.-+-|+-.-.+.++. .|++.|.++|++..--.....+...+..-..+.. +++=..+...++.+...+..
T Consensus 111 ~gIav~nVLLPslIK~~-Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~aL~~WAl~allAl~~ 181 (395)
T COG2807 111 AGIAVINVLLPSLIKRD-FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRGALGFWALLALLALLI 181 (395)
T ss_pred hhHHHHHHhhhHHHHhh-cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHHHHHHHHHHHHHHHHH
Confidence 56555777777777765 5677889999987766665544444433333333 55666666666665555544
No 224
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.48 E-value=0.62 Score=48.69 Aligned_cols=136 Identities=15% Similarity=0.107 Sum_probs=83.0
Q ss_pred chhhHHHHHHhhhhhcchhccCCcH--HHHHHHHHHHHHHHHHHHHHHHHHhcccccccc-chhHHHHHHHHHHHHHHHH
Q 015174 2 GFFSKLILIVGGPLVGKLMDHSPRI--PAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSS-MLLHPWFFVLVLAGAVERL 78 (412)
Q Consensus 2 g~~~~lp~ll~g~~~G~~vDr~~R~--~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~g~~~~l 78 (412)
++..++.-++.+...|.+-||++-| +++..+.+.-.+. + +...++..+...+ ...+..++..++.|...
T Consensus 323 ~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i----~--~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~-- 394 (477)
T PF11700_consen 323 GLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII----P--LYGLFGFWPSFFGLKSPWEFWVLAVLIGLFM-- 394 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH----H--HHHHHHhhhcccCcccHHHHHHHHHHHHHHh--
Confidence 4556677777788888888888766 6655554322111 1 1111210000000 01123334444444443
Q ss_pred HhhhhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHHHHHHHHHHHHH
Q 015174 79 TGVALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLKFAAGLIMWSLP 151 (412)
Q Consensus 79 ~~~a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~~~~~~~~~s~~ 151 (412)
+...+..|.....+.+++ +.++.-+.....+..+-++||++.|.+.+..| -|.++.++....++.++
T Consensus 395 ---G~~qs~sRs~~~~LiP~g---~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ 462 (477)
T PF11700_consen 395 ---GGIQSASRSLFSRLIPPG---REAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLI 462 (477)
T ss_pred ---hhHHHHHHHHHHHhCCCc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 333444555555587864 67999999999999999999999999999887 77777776666666653
No 225
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=94.29 E-value=0.054 Score=55.54 Aligned_cols=121 Identities=14% Similarity=0.107 Sum_probs=89.7
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
..+++++..|++-..-.+..++++-+++.|.+|+++.+.+.++..+..++...+-.. .-.+.++..=..-+
T Consensus 62 ~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs---------~~Fwq~~l~R~~vG 132 (493)
T KOG1330|consen 62 YFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFS---------NHFWQVLLCRGFVG 132 (493)
T ss_pred hcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHH---------HHHHHHHHHHHHhc
Confidence 479999999999999999999999999999999999998877766544433332111 01122222223346
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+|.-++....+.++-...|++.|+++.++.+..-..-..+.++.+.....
T Consensus 133 iGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~ 182 (493)
T KOG1330|consen 133 IGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVAS 182 (493)
T ss_pred cchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeecc
Confidence 68888999999999999999999999999888777655556655544433
No 226
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=93.94 E-value=1.1 Score=46.90 Aligned_cols=120 Identities=11% Similarity=-0.039 Sum_probs=83.0
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
..+.+.....+..++--+|.++|+++.+.+..|+|++++..++...+.++.... .+.+ +.. ...+.=|+.|+..+.
T Consensus 112 ~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~--a~a~-~~~-~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 112 LVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILT--AFAP-NYW-MFLIFRFLSGFFGSG 187 (521)
T ss_pred eeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHH--HHhC-cHH-HHHHHHHHHHhhccc
Confidence 357788888888899999999999999999999999999999988776665332 2222 100 011122233333322
Q ss_pred hhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 320 LGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.......+.-|.++++.|+.+... ....+..+.....++..+-+
T Consensus 188 -----~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 188 -----PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred -----hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 224455566799999999999999 77787777777666655544
No 227
>PRK11462 putative transporter; Provisional
Probab=93.87 E-value=2.5 Score=43.78 Aligned_cols=120 Identities=13% Similarity=0.074 Sum_probs=71.9
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHH-HHHHHHHHHHHHHHHHHHhcCCCcCcc-h
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAG-AAGLIFQASLLAMAVAVYWSGSLSQQN-P 307 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~-~~~~~~~~~~l~~~v~~~~~g~~~~~~-~ 307 (412)
++-|.+..|+|+...|.++.+.-+--..---+.+.+.. |+|++|-- .++.+ .+.+.++..+.++..+... .
T Consensus 33 ~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i---~~~i~~~llf~~p~~s~~~~~ 109 (460)
T PRK11462 33 MFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGAL---PFGIVCVLAYSTPDLSMNGKM 109 (460)
T ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHH---HHHHHHHHHHhCCCCCcchHH
Confidence 44445568999999999998877766666666666655 56776543 33322 2222222233222112112 1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHhhccCC-cccchhHHHHHHHHHHHHH
Q 015174 308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLVE 357 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-~~~~G~v~g~~~sl~~~~~ 357 (412)
++++. ...+-.++.-.+|+....+.-|.++ ++||.+.++......+...
T Consensus 110 ~y~~~-~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~ 159 (460)
T PRK11462 110 IYAAI-TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGG 159 (460)
T ss_pred HHHHH-HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 22222 2223355666788888888777775 7999999998887777543
No 228
>PRK09848 glucuronide transporter; Provisional
Probab=93.85 E-value=1.8 Score=44.32 Aligned_cols=112 Identities=14% Similarity=0.170 Sum_probs=62.8
Q ss_pred HHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh----chhhHH-HHHHHHHHHHHHHHHHHHhcC-CCcCcch-
Q 015174 236 AFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL----GILKAG-AAGLIFQASLLAMAVAVYWSG-SLSQQNP- 307 (412)
Q Consensus 236 ~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~----g~~r~~-~~~~~~~~~~l~~~v~~~~~g-~~~~~~~- 307 (412)
.|.+ ..|+|+.+.|.+.....+.......+.+++..|. |++|-. .++... +.......+... ..+....
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 109 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAP---LMIFSVLVFWVPTDWSHSSKV 109 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHH---HHHHHHHHHhCcCCCCcchHH
Confidence 4665 4799999999999999999999999999998886 555432 333321 111222222221 1111111
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHH
Q 015174 308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEIS 351 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~s 351 (412)
.+.+ .......++.-.++.....+.-+.+ ++++|.+.++....
T Consensus 110 ~~~~-~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~ 153 (448)
T PRK09848 110 VYAY-LTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGI 153 (448)
T ss_pred HHHH-HHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHH
Confidence 1111 1111223233335555555544444 55788888776653
No 229
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.18 E-value=4.6 Score=39.52 Aligned_cols=148 Identities=14% Similarity=0.108 Sum_probs=80.7
Q ss_pred CcchHHHHHHHHH-HHhhhccchHHHHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 015174 211 PVLPASLAYVLLC-LNVVLTPGSLMTAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 288 (412)
Q Consensus 211 ~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~ 288 (412)
|-|+-.+.++.+| .. ...|=++-..+.. ..|+|+..-|-+.+..-.-...-+-+++.+..++|.. ..++. ..-..
T Consensus 264 ppfw~~~iicv~yyva-~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-~~wv~-~a~~~ 340 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVA-WFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-LWWVA-SACIL 340 (459)
T ss_pred ccHHHHHHHHHHHHHH-HHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-ehhHH-HHHHH
Confidence 6666677777777 33 4555555566654 5899998777665544444444456677888999873 22222 11111
Q ss_pred HHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhh---HHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 015174 289 LLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGA---QILQTGIPSSKANLIGTTEISVASLVESVMLGVAI 365 (412)
Q Consensus 289 ~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~---~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~ 365 (412)
.+..-...++. -.++..++.+. || ++++-.- -..--.|||+..|++.|...++|++--....++..
T Consensus 341 tl~~H~~l~Ft-~lsPy~~m~~l---------GL-sysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag 409 (459)
T KOG4686|consen 341 TLLGHSGLFFT-FLSPYTSMTFL---------GL-SYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAG 409 (459)
T ss_pred HHHHhhhHHhh-hccHHHHHHHH---------hh-hHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhh
Confidence 11111111111 01122333332 33 3333222 23445679999999999999999985444555544
Q ss_pred hccCCCc
Q 015174 366 IANDVSH 372 (412)
Q Consensus 366 ~~~~~~~ 372 (412)
...|.+.
T Consensus 410 ~i~d~~g 416 (459)
T KOG4686|consen 410 FIADGDG 416 (459)
T ss_pred eeecCCC
Confidence 4444433
No 230
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=93.01 E-value=6.1 Score=40.28 Aligned_cols=49 Identities=16% Similarity=0.214 Sum_probs=42.6
Q ss_pred cchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhH
Q 015174 230 PGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKA 278 (412)
Q Consensus 230 ~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~ 278 (412)
+-+...+|+++.|+|+.++|.+.+.+.+..+++..+.+.+.+|.+..+.
T Consensus 21 ~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~ 69 (400)
T PF03825_consen 21 FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKR 69 (400)
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHH
Confidence 3445778999999999999999999999999999999999999875443
No 231
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=92.96 E-value=2.2 Score=44.56 Aligned_cols=74 Identities=7% Similarity=-0.114 Sum_probs=46.8
Q ss_pred hhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC 392 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~ 392 (412)
+.++=..+.....+..+...|+.+|.+.++...-+.......+........-.-....+.+..+.++....+..
T Consensus 399 g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~~ 472 (488)
T KOG2325|consen 399 GIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALWI 472 (488)
T ss_pred ccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHHH
Confidence 33443456677888888889999999999888888877766655544443333444555555554444444333
No 232
>PF13347 MFS_2: MFS/sugar transport protein
Probab=92.55 E-value=0.3 Score=49.78 Aligned_cols=122 Identities=15% Similarity=0.170 Sum_probs=72.4
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHH----HhchhhHH-HHHHHHHHHHHHHHHHHHhcCC--CcCcc
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVR----RLGILKAG-AAGLIFQASLLAMAVAVYWSGS--LSQQN 306 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~----R~g~~r~~-~~~~~~~~~~l~~~v~~~~~g~--~~~~~ 306 (412)
++-|.+..|+++...|++...+-+-...-..+.+.+.. |.|++|-- +++... +.+..+..+.+.+ .+...
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~---~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAIL---LALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHH---HHHHHHHhhccccchhhhhh
Confidence 33444568999999999998777666655556665555 88877643 333322 2222222222211 11112
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhHHhhccCC-cccchhHHHHHHHHHHHHHH
Q 015174 307 PLLFFLCLIVLSRLGHMSYDIVGAQILQTGIP-SSKANLIGTTEISVASLVES 358 (412)
Q Consensus 307 ~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp-~~~~G~v~g~~~sl~~~~~l 358 (412)
....+....++..++.-.+++....+.-+.++ +++|.+.++..........+
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~ 154 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL 154 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH
Confidence 22222223333355666677888888888886 47999999999888776553
No 233
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=92.54 E-value=4.1 Score=43.05 Aligned_cols=139 Identities=13% Similarity=0.043 Sum_probs=92.6
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHH
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLC 313 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~ 313 (412)
++-+++++|-.+..+|..-..+=+|.+.-=+...++.+++|..|.+..++.... .=.....+.-.++. ..|+=+ +-
T Consensus 394 LfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~--~Rf~~~S~L~n~W~-vLPiei-lq 469 (618)
T KOG3762|consen 394 LFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNV--GRFLYYSYLQNPWM-VLPIEI-LQ 469 (618)
T ss_pred HHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHH--HHHHHHHHhcCchh-eeeHHH-HH
Confidence 556678899999999988899999999999999999999999998776654211 11111133222221 223222 23
Q ss_pred HHHHhhhhh-hhhhhhhhHHhhccCCcccchhHHHHHHHHHHH--HHHHHHHHHHhccCCCchhHHHHHHHH
Q 015174 314 LIVLSRLGH-MSYDIVGAQILQTGIPSSKANLIGTTEISVASL--VESVMLGVAIIANDVSHFGFLATLSLL 382 (412)
Q Consensus 314 g~~~sr~GL-w~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~--~~ll~~~~~~~~~~~~~f~~l~~~s~~ 382 (412)
|+.. ++ | .+..+++....||+++-++.|+.+.+-.+ .++.+.+.+....+-+....-.+..+.
T Consensus 470 git~---aliW---aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giA 535 (618)
T KOG3762|consen 470 GITH---ALIW---AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIA 535 (618)
T ss_pred HHHH---HHHH---HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHH
Confidence 4422 32 4 46777888889999999999998888876 566666666666665554444444433
No 234
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=92.54 E-value=2.2 Score=44.30 Aligned_cols=157 Identities=14% Similarity=0.193 Sum_probs=90.6
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHH----HHHhchhhH-HHHHHHHHHHHHHHHHHHHhcCCCcCcc-h
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL----VRRLGILKA-GAAGLIFQASLLAMAVAVYWSGSLSQQN-P 307 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l----~~R~g~~r~-~~~~~~~~~~~l~~~v~~~~~g~~~~~~-~ 307 (412)
+.-|-+..|+|+...|.++...=+-=...--+.+.+ .+|+|+.|= ++++.. ...+.++..+.++..+... .
T Consensus 36 l~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~i---p~~i~~~l~F~~p~~~~~~k~ 112 (467)
T COG2211 36 LFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAI---PFAIVAVLLFITPDFSMTGKL 112 (467)
T ss_pred HHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhH---HHHHHHHHHHcCCCcccCcch
Confidence 444455689999999999877655444333333333 456777653 333322 3334444444443322111 1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHHHHH-----HHhccCCCchhHHHHHHH
Q 015174 308 LLFFLCLIVLSRLGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVMLGV-----AIIANDVSHFGFLATLSL 381 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~-----~~~~~~~~~f~~l~~~s~ 381 (412)
.+.++.-+ +-.++--+.|+....+--+.+ +++||-+.++.......+..++.... ....+++..+++...+.+
T Consensus 113 ~ya~vtY~-l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~ 191 (467)
T COG2211 113 IYALVTYM-LLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALV 191 (467)
T ss_pred HHHHHHHH-HHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHH
Confidence 22221111 112344456677777766666 66899999999888888754433322 334455558888888888
Q ss_pred HHHHHHHHHHHHH
Q 015174 382 LSVVGAAWMFCHW 394 (412)
Q Consensus 382 ~~v~~~~~~~~~~ 394 (412)
.++.....++..|
T Consensus 192 ~~vi~~i~~l~~~ 204 (467)
T COG2211 192 LGVIGVILLLFCF 204 (467)
T ss_pred HHHHHHHHHHHHH
Confidence 8877777777766
No 235
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=90.51 E-value=12 Score=38.03 Aligned_cols=90 Identities=10% Similarity=0.098 Sum_probs=53.0
Q ss_pred HHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHHHHH-HHHHHHHHH
Q 015174 315 IVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLSLLS-VVGAAWMFC 392 (412)
Q Consensus 315 ~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s~~~-v~~~~~~~~ 392 (412)
..+.++|+-.-..+...+.-+.+|||+|+++-++.-++-.. +-......+..+.+-++-....++...+ +.....+..
T Consensus 96 F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia 175 (403)
T PF03209_consen 96 FLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIA 175 (403)
T ss_pred HHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555444556666788889999999999998888665 3333333345555555555555554333 334445555
Q ss_pred HHhcCCCccCCc
Q 015174 393 HWLLNPTDEQRS 404 (412)
Q Consensus 393 ~~~~~~~~~~~~ 404 (412)
.|-.-+|+.+++
T Consensus 176 ~wg~E~r~~~~~ 187 (403)
T PF03209_consen 176 LWGQEPRRSRRA 187 (403)
T ss_pred HHhcccCCcccc
Confidence 664444444444
No 236
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=90.27 E-value=0.005 Score=62.95 Aligned_cols=119 Identities=10% Similarity=0.025 Sum_probs=73.6
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhh
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMS 324 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~ 324 (412)
+...++..+...+|.++|+++.+.+.+|+|++++...+.....+..+.. .+.+.. .....+..+-++.++|.-.
T Consensus 45 ~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~--~~~~~~----~~~~~~~~~R~~~G~~~g~ 118 (451)
T PF00083_consen 45 SLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILI--AFAPSY----NNFWMLLIGRFLIGFGIGG 118 (451)
T ss_pred HHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccc--cccccc----ccccccccccccccccccc
Confidence 3457888899999999999999999999999998886655332222111 111100 0111111222222334333
Q ss_pred hhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 325 YDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 325 ~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
.-.....+..|..|++.||+..+........-.++...+.....+
T Consensus 119 ~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 119 AYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 556777788999999999999988887765444444444433333
No 237
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=88.92 E-value=17 Score=36.45 Aligned_cols=122 Identities=16% Similarity=0.019 Sum_probs=70.5
Q ss_pred HHHHH-H-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 234 MTAFL-T-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 234 ~~~y~-~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
+..|. + +.|+++.+++.++..|-+..++-..+.+.+..|+|++|.-+.-...+. ..|+.-..+ ..++++.
T Consensus 55 pY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~---~scl~k~~~-----~~~~L~~ 126 (354)
T PF05631_consen 55 PYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYS---LSCLTKHSS-----NYPVLLL 126 (354)
T ss_pred chhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH---HHHHHHhcc-----ccHHHHH
Confidence 44553 2 579999999999999999988888888999999999887664433322 222222111 1222222
Q ss_pred ---HHHHHHhhhhhhhhh-hhhhHHhhccCCcccchhHHHHHHHH-HHHHHHHHHHHH
Q 015174 312 ---LCLIVLSRLGHMSYD-IVGAQILQTGIPSSKANLIGTTEISV-ASLVESVMLGVA 364 (412)
Q Consensus 312 ---~~g~~~sr~GLw~~d-l~~~~l~Q~~vp~~~~G~v~g~~~sl-~~~~~ll~~~~~ 364 (412)
++|+..+-+-- .|. =-+.+..++..|++..+...+....+ |.....++.++.
T Consensus 127 GRvlgGiaTSLLfS-~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a 183 (354)
T PF05631_consen 127 GRVLGGIATSLLFS-AFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVA 183 (354)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHH
Confidence 23444433322 011 11222344556778888887766644 333455555544
No 238
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=88.43 E-value=3.2 Score=43.77 Aligned_cols=134 Identities=18% Similarity=0.060 Sum_probs=83.5
Q ss_pred HHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHH
Q 015174 238 LTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVL 317 (412)
Q Consensus 238 ~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~ 317 (412)
.++++-+..+++++.++..-..+...-+...+.+|+|-+.+.+.|..+.....+. ..+.. + ...+++..+-+..
T Consensus 73 ~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~l--ssF~~-~---i~~l~lt~gvi~G 146 (509)
T KOG2504|consen 73 MDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLL--SSFAT-S---LWQLYLTFGVIGG 146 (509)
T ss_pred HHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHH--HHHHh-h---HHHHHHHHHHHhh
Confidence 4568999999999999999999999999999999999999888776643322222 13322 1 1222222222333
Q ss_pred hhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHH-HHHHHHHHHHhccCCCchhHHHHHH
Q 015174 318 SRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASL-VESVMLGVAIIANDVSHFGFLATLS 380 (412)
Q Consensus 318 sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~-~~ll~~~~~~~~~~~~~f~~l~~~s 380 (412)
-++|+ ++..+...+- .-++++|+.++|+..+=.-. ..+...+.-.+....+-+....+..
T Consensus 147 ~G~~~-~~~paiviv~--~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~ 207 (509)
T KOG2504|consen 147 LGLGL-IYLPAVVILG--TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFG 207 (509)
T ss_pred ccchh-hhcchhhhhh--hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHH
Confidence 34444 4444444333 34899999999998776554 2333333345555555555555444
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=88.29 E-value=14 Score=38.32 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=60.1
Q ss_pred HHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhc-----hhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHH
Q 015174 236 AFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLG-----ILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLL 309 (412)
Q Consensus 236 ~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g-----~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~ 309 (412)
.|++ ++|+|+++++.+.+...+....-.+ .+.+..|++ +++.+.++... +...+.... ....+ .....
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l---~~~~~~~~l-~~~~~-~~~~~ 123 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLL---GSAILYGLL-PGKVS-SAKVA 123 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHH---HHHHHHHhc-ccccc-hHHHH
Confidence 3455 5899999999999999999998777 899999986 33334433222 111111111 11111 11111
Q ss_pred HHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHH
Q 015174 310 FFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTE 349 (412)
Q Consensus 310 l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~ 349 (412)
. ..+.+..++-...|++...+.-|..+ ++++..++.|
T Consensus 124 ~--~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~ 160 (468)
T TIGR00788 124 A--AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLV 160 (468)
T ss_pred H--HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCee
Confidence 1 12233344555688888888777777 4444444444
No 240
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.90 E-value=6 Score=40.36 Aligned_cols=146 Identities=18% Similarity=0.116 Sum_probs=92.5
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhh
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSR 319 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr 319 (412)
.++-++..+|++++.-|+..++-+-..+.+..|+|.+-.+.+|+.......+ .+..+. ..+++++ .=.+.+
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTi----lFafg~---sy~~l~v--AR~LQg 170 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTI----LFAFGN---SYPMLFV--ARSLQG 170 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHH----HHHHcc---hhHHHHH--HHHHhh
Confidence 3677889999999999999999999999999999998777777654322211 222222 1222222 334455
Q ss_pred hhhhhhhhhhhHHhhccC-CcccchhHHHHHHHHHHHHHHHHHHHHHhcc--CCCchhHHHHHHHHHHHHHHHHHHHH
Q 015174 320 LGHMSYDIVGAQILQTGI-PSSKANLIGTTEISVASLVESVMLGVAIIAN--DVSHFGFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 320 ~GLw~~dl~~~~l~Q~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~--~~~~f~~l~~~s~~~v~~~~~~~~~~ 394 (412)
+|--..|.+-..+.-... .|++||++.|..-..-.+-.++.+..+.++. -+.+-|.+++..++.+-.+.-+|...
T Consensus 171 vgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 171 VGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIE 248 (464)
T ss_pred hhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeC
Confidence 566556666555555554 5567899988876666655666666666663 34455555555554444555555444
No 241
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=86.82 E-value=2.9 Score=42.77 Aligned_cols=118 Identities=14% Similarity=0.124 Sum_probs=77.2
Q ss_pred chhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhh
Q 015174 2 GFFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGV 81 (412)
Q Consensus 2 g~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~ 81 (412)
|.+.++--++.+..+|.+-||.+-|+++....+ ..+.++ ++....+.+ . ..+...+++|.. .
T Consensus 294 g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lv------i~~~~~-~~~~~~~~~----~--~f~i~gll~g~s-----~ 355 (438)
T COG2270 294 GIALSVVAALGAIIAGFLDERFGSKPVLMIGLV------ILSIAA-LYLIFLEGE----L--DFWILGLLVGTS-----L 355 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCceeehHHHH------HHHHHH-HHHHHcccc----H--HHHHHHHHHHHh-----c
Confidence 455666677888899999999987787666543 222221 222233221 1 111222233322 3
Q ss_pred hhhhhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-hhHHHH
Q 015174 82 ALGVAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE-PVTCLK 140 (412)
Q Consensus 82 a~~~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~-~~~~~~ 140 (412)
+-..|..|.|.-.+++++ +-.+.-+.....+..+.++||.+.|.+.+..| -+..+.
T Consensus 356 G~~qA~SRSy~~~lvp~~---k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~ 412 (438)
T COG2270 356 GGAQASSRSYLARLVPKG---KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVL 412 (438)
T ss_pred chHHHHHHHHHHHhCCCc---cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHH
Confidence 555677888888899975 67788888899999999999999999999876 334433
No 242
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=86.02 E-value=13 Score=36.21 Aligned_cols=109 Identities=14% Similarity=0.040 Sum_probs=56.6
Q ss_pred HHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhc
Q 015174 9 LIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVE 88 (412)
Q Consensus 9 ~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~ 88 (412)
..+-....+.+.||++++|+++.+.....+. . ++...... . ..++...+..-..+..+......+.+
T Consensus 191 ~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~----~--~l~~~~~~------~-~~~~~~~l~g~~~s~i~P~~~s~a~~ 257 (310)
T TIGR01272 191 AMVGRFIGSAVMPMISQGRYLAFNAFLAVLL----S--IGAALTHG------Y-VAMWFVLALGLFNSIMFPTIFSLALN 257 (310)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH----H--HHHHHcCC------H-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344456677899999999877665433222 1 11112111 1 12222222222223333333333332
Q ss_pred ccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHH
Q 015174 89 RDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKF 141 (412)
Q Consensus 89 RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~ 141 (412)
+ .++ +-.++.+. .....+...+.|.+.|.+.+..|.+.++++
T Consensus 258 ~------~~~----~~~~asai-~~~~~~Gg~i~P~l~G~lad~~g~~~a~~v 299 (310)
T TIGR01272 258 A------LGR----HTSQGSGI-LCLAIVGGAIVPLLQGSLADCLGIQLAFAL 299 (310)
T ss_pred h------hhh----hhhhhHHH-HHHHHhcchHHHHHHHHHHHhccchHHHHH
Confidence 1 222 22233333 356667789999999999998887777653
No 243
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=83.81 E-value=5.9 Score=40.21 Aligned_cols=92 Identities=11% Similarity=0.013 Sum_probs=49.5
Q ss_pred hhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhhhccccee
Q 015174 14 PLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVAVERDWAV 93 (412)
Q Consensus 14 ~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ai~RDwv~ 93 (412)
+..|..|||.+||+.|..+.++- ++..+.++.... . .. ...++-....+.|.+.|.+.. |-|
T Consensus 399 LIt~~iverlGRKkTMal~l~~f-------~iflfll~~c~~-r--n~------~tvllf~arafisg~fqvaYv--YtP 460 (528)
T KOG0253|consen 399 LITGVIVERLGRKKTMALSLILF-------GIFLFLLTTCKT-R--NA------YTVLLFTARAFISGAFQVAYV--YTP 460 (528)
T ss_pred hHHHHHHHHhcchhHHHHHHHHH-------HHHHHHHHHhcC-c--ch------hHHHHHHHHHHHhchheEEEE--ecC
Confidence 46788999999999999986532 221122222111 0 01 112222334445566666665 889
Q ss_pred eecCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Q 015174 94 LLAGINRPIALAKANAVLNRIDLLCEIAGASLF 126 (412)
Q Consensus 94 ~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lg 126 (412)
.+++.. --+..-..-..+.-+.-++.|.++
T Consensus 461 EVyPTa---vRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 461 EVYPTA---VRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred cccchh---hhhcchhhhhhHHhhhhhhhhHHH
Confidence 998853 222222333333334556777777
No 244
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=81.90 E-value=35 Score=29.96 Aligned_cols=88 Identities=10% Similarity=0.030 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccC
Q 015174 258 MGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGI 337 (412)
Q Consensus 258 ggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v 337 (412)
...+.++..|.+.+++|.++++.++.....+.. ...+++.. ..++. +-++.++|--.+-.++..++-+..
T Consensus 49 ~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~---~~~~~~~~------~~l~~-~s~l~G~~~a~lW~aqg~ylt~~s 118 (156)
T PF05978_consen 49 SFAISCLFAPSIVNKLGPKWSMILGSLGYAIYI---ASFFYPNS------YTLYP-ASALLGFGAALLWTAQGTYLTSYS 118 (156)
T ss_pred HHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHH---HHHHhhhH------HHHHH-HHHHHhhhhHHhhHhhhHHHHHcC
Confidence 345667889999999999999988865433221 11333311 11111 111223332234456667777777
Q ss_pred CcccchhHHHHHHHHHHH
Q 015174 338 PSSKANLIGTTEISVASL 355 (412)
Q Consensus 338 p~~~~G~v~g~~~sl~~~ 355 (412)
.++.++|-.|+.-++...
T Consensus 119 ~~~~~~~~~~ifw~i~~~ 136 (156)
T PF05978_consen 119 TEETIGRNTGIFWAIFQS 136 (156)
T ss_pred CHHHHhhHHHHHHHHHHH
Confidence 889999988887777664
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=80.58 E-value=69 Score=32.87 Aligned_cols=64 Identities=9% Similarity=0.080 Sum_probs=35.8
Q ss_pred HHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHH
Q 015174 205 KEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYL 269 (412)
Q Consensus 205 ~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l 269 (412)
+...+-|-.+....+-+.+ +. -...|++...-+.++|+|...+++.--......+.+....++.
T Consensus 259 ~~vLklk~v~~la~i~lt~K~g-f~a~da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ 323 (510)
T KOG3574|consen 259 RDVLKLKSVRWLAGILLTGKLG-FQAADALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKW 323 (510)
T ss_pred HHHHcCccHHHHHHHHHHHHHH-hhhhhhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheee
Confidence 3344445444433333333 33 1344556666677999999998887755555555544444443
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=79.11 E-value=60 Score=34.09 Aligned_cols=160 Identities=9% Similarity=0.098 Sum_probs=86.9
Q ss_pred cchHHHHHHHh--cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchh-hHHHHHHHHHHH-HHHHHHHHHhcCCCcCc
Q 015174 230 PGSLMTAFLTQ--RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGIL-KAGAAGLIFQAS-LLAMAVAVYWSGSLSQQ 305 (412)
Q Consensus 230 ~~~~~~~y~~~--~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~-r~~~~~~~~~~~-~l~~~v~~~~~g~~~~~ 305 (412)
+...+-.|.++ .+-..+.+|+..++.+++-..++..++.-.+|.+.. +=+..+...+.. +++-......+ .
T Consensus 53 ~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~-----~ 127 (488)
T KOG2325|consen 53 YLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP-----N 127 (488)
T ss_pred EEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc-----c
Confidence 34457778886 899999999999999999999999999999988853 333334443222 11111112211 1
Q ss_pred chHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHH--HHHHHH-HHHHHHHHHhccCCCchh--------
Q 015174 306 NPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEI--SVASLV-ESVMLGVAIIANDVSHFG-------- 374 (412)
Q Consensus 306 ~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~--sl~~~~-~ll~~~~~~~~~~~~~f~-------- 374 (412)
...++++.+=.+.++|.-..-..-..+--...+++++=..+++.+ .+.... +.+....+.+..+.-.+.
T Consensus 128 ~~~y~mL~~R~l~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~Y 207 (488)
T KOG2325|consen 128 GVKYLMLVARILTGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMY 207 (488)
T ss_pred chHHHHHHHHHHcCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEec
Confidence 134555556555566653333333333333345555555555555 222222 222233333332222222
Q ss_pred --HHHHHHHHHHHHHHHHHHHH
Q 015174 375 --FLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 375 --~l~~~s~~~v~~~~~~~~~~ 394 (412)
-.+++++..+....++++.+
T Consensus 208 Tap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 208 TAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred chHHHHHHHHHHHHHHHHHhhe
Confidence 13455555566666666666
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=78.16 E-value=4.1 Score=43.02 Aligned_cols=52 Identities=25% Similarity=0.433 Sum_probs=48.0
Q ss_pred HHHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHH
Q 015174 233 LMTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLI 284 (412)
Q Consensus 233 ~~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~ 284 (412)
++.+|.+++|++|.++|.+.+.-=+-++++.-+.+.+.+|+-.+|..+.+..
T Consensus 33 ll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl 84 (618)
T KOG3762|consen 33 LLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSL 84 (618)
T ss_pred HHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHH
Confidence 5888999999999999999999999999999999999999999988877654
No 248
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=77.79 E-value=1.1e+02 Score=33.34 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=33.2
Q ss_pred chHHHHHHH-hcCCCCchhHHH----hhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHH
Q 015174 231 GSLMTAFLT-QRGLNPSIIGGF----SGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQAS 288 (412)
Q Consensus 231 ~~~~~~y~~-~~gls~~~~G~~----~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~ 288 (412)
.++++.|+. .+|.+++.-..+ .+..-+.+++|+.++ -+++|..|++.++.....+
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iA---D~~lG~~~tIl~~~ii~~l 66 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIA---DGWLGKFKTILYLSIVYVV 66 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHHHHHHHH
Confidence 345777876 478877643333 344444444444444 5778888998877765443
No 249
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=77.11 E-value=19 Score=36.65 Aligned_cols=116 Identities=17% Similarity=0.020 Sum_probs=69.4
Q ss_pred cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHHHhhh
Q 015174 241 RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIVLSRL 320 (412)
Q Consensus 241 ~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~~sr~ 320 (412)
.+.++..=|.+-+.-+++-...+...+.+..|+|++.++..+...-.+.. ..|.-+ --| ..++++|+
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~-----ll~~~S-------~~F-~afv~aR~ 129 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSY-----LLWALS-------RNF-AAFVLARF 129 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHH-----HHHHHH-------HHH-HHHHHHHH
Confidence 44455555566667788888889999999999999988875543211110 111101 011 23333444
Q ss_pred hhhhhh---hhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 321 GHMSYD---IVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 321 GLw~~d---l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
=.-+++ .....+.-|.++|++|+...++.+..-..--.+.+.++..++.
T Consensus 130 l~Gi~kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 130 LGGIFKGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred hhhhccCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 333333 2345677888899999999988877666544444444544444
No 250
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=74.19 E-value=1.2e+02 Score=31.90 Aligned_cols=83 Identities=18% Similarity=0.224 Sum_probs=52.7
Q ss_pred HHHHhHHHHhcCCcchHHHHHHHHH-HHhhhccchHHHHHHHhcCCCCchhHHHh----hHHHHHHHHHHHHHHHHHHHh
Q 015174 199 AIKLGWKEYMQQPVLPASLAYVLLC-LNVVLTPGSLMTAFLTQRGLNPSIIGGFS----GLCASMGVAATFLSAYLVRRL 273 (412)
Q Consensus 199 ~~~~g~~~~~~~~v~~~~~~~a~l~-~t~v~~~~~~~~~y~~~~gls~~~~G~~~----~~~avggllGt~l~~~l~~R~ 273 (412)
.+.|+.+..+|+|.++....+.+.| ++ .-..+.+.-..++++-=+|..+.-++ ...++.-+.-.++.+++.||+
T Consensus 268 s~~es~k~l~kS~yL~~Ia~lvi~Ygi~-inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~ 346 (491)
T PF03219_consen 268 SLKESFKLLLKSKYLLCIALLVIAYGIS-INLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRF 346 (491)
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999988888888 32 12233333334555444555555444 222333333338889999999
Q ss_pred chhhHHHHH
Q 015174 274 GILKAGAAG 282 (412)
Q Consensus 274 g~~r~~~~~ 282 (412)
|-..+..+.
T Consensus 347 GW~~~Alit 355 (491)
T PF03219_consen 347 GWRTAALIT 355 (491)
T ss_pred hHHHHHHHh
Confidence 987665544
No 251
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=73.20 E-value=65 Score=33.91 Aligned_cols=128 Identities=16% Similarity=-0.064 Sum_probs=81.0
Q ss_pred hccchHHHHHHHh------cCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 015174 228 LTPGSLMTAFLTQ------RGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGS 301 (412)
Q Consensus 228 ~~~~~~~~~y~~~------~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~ 301 (412)
...|.....|... .++...++|..-++--++.++|-+.+..|.+|+++.+.+........ +.+....+..+
T Consensus 57 ~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~---~~~~~~~~~~s 133 (495)
T KOG2533|consen 57 AYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG---LFGFLTAAVHS 133 (495)
T ss_pred HhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH---HHHHHHHHHhh
Confidence 4455556666543 45666789999999999999999999999999997665543332211 11112222222
Q ss_pred CcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHH
Q 015174 302 LSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVA 364 (412)
Q Consensus 302 ~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~ 364 (412)
.+ ...++-++.|++=+. .| .+...++...-.+++||...|...+-+....+....+.
T Consensus 134 ~~-~~ialr~llGl~es~--~w---P~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA 190 (495)
T KOG2533|consen 134 FP-GLIALRFLLGLFESG--GW---PGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIA 190 (495)
T ss_pred hH-HHHHHHHHHHHHhcc--cc---hHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHH
Confidence 11 011222233443322 22 57778888889999999999999988877555555443
No 252
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=72.35 E-value=74 Score=28.65 Aligned_cols=115 Identities=20% Similarity=0.106 Sum_probs=59.9
Q ss_pred HHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhh
Q 015174 6 KLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGV 85 (412)
Q Consensus 6 ~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~ 85 (412)
.+...+..++.|.+.||++||+.+...... . ..+.. ...+.... ..+.+.......|........ ...
T Consensus 49 ~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~--~--~~~~~--~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~-~~~ 116 (338)
T COG0477 49 FLGYAIGSLLAGPLGDRYGRRKVLIIGLLL--F--LLGTL--LLALAPNV-----GLALLLILRLLQGLGGGGLLP-VAS 116 (338)
T ss_pred HHHHHHHhhhhhhccccccchHHHHHHHHH--H--HHHHH--HHHhCccc-----hHHHHHHHHHHHHhhhHHHHH-HHH
Confidence 345555568999999999888776665443 1 11111 11111110 111222222223444433332 233
Q ss_pred hhcccceeeecCCCchhhhHHHHHHHHH-HHHHHHHHHHHHHHHHHhh--cChhHH
Q 015174 86 AVERDWAVLLAGINRPIALAKANAVLNR-IDLLCEIAGASLFGILLSK--YEPVTC 138 (412)
Q Consensus 86 ai~RDwv~~l~~~~~~~~L~~~Ns~l~~-id~v~~llgP~lgG~L~~~--~~~~~~ 138 (412)
++..||.|. . + +....++.... ......+++|.+++.+... .+|+..
T Consensus 117 ~~~~~~~~~--~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T COG0477 117 ALLSEWFPE--A-T---ERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAA 166 (338)
T ss_pred HHHHHhcCc--h-h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH
Confidence 334454443 1 1 45556666666 5777889999888888775 456653
No 253
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=70.80 E-value=47 Score=34.84 Aligned_cols=160 Identities=12% Similarity=0.055 Sum_probs=76.0
Q ss_pred hccchHHHHHHH-hcC----CCCchhHHHhhHHHHHHHHHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHHHHHhcCC
Q 015174 228 LTPGSLMTAFLT-QRG----LNPSIIGGFSGLCASMGVAATFLSAYLVRR-LGILKAGAAGLIFQASLLAMAVAVYWSGS 301 (412)
Q Consensus 228 ~~~~~~~~~y~~-~~g----ls~~~~G~~~~~~avggllGt~l~~~l~~R-~g~~r~~~~~~~~~~~~l~~~v~~~~~g~ 301 (412)
-+..+++..|++ +.+ +++++---+++.-+.--=+-+.+.+++..| +|.+|+...+.....+.-.+ ...++.
T Consensus 38 YGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~---L~~~~~ 114 (498)
T COG3104 38 YGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLV---LAISSV 114 (498)
T ss_pred hhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH---Hhcccc
Confidence 344556777876 356 887654444433222222344555666555 58889988776543222111 222210
Q ss_pred CcCcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccC---CcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHH
Q 015174 302 LSQQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGI---PSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLAT 378 (412)
Q Consensus 302 ~~~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v---p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~ 378 (412)
.. ....++. .+++..+.|+ +--..+.+.-+.- ++++.+-.+-.+.+.|.+ ++.+..+...+.+.-- +...
T Consensus 115 ~~-~~gl~i~-L~~I~iG~Gl--~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiG-sl~~p~i~~~~~~~~g--~~~g 187 (498)
T COG3104 115 SG-PGGLYIG-LALIIVGTGL--FKPNISSLLGELYPKDDPRRDGGFTLFYMGINIG-SLIAPIITGLLAINYG--WHVG 187 (498)
T ss_pred cc-ccHHHHH-HHHHHhcccc--ccccHHHHHHHhcCCCCcccCCCccEEEEEeehH-HHHHHHHHHHHHHhhC--HHHH
Confidence 00 0112221 2233346677 3333333333222 223333333334444444 6666666655554444 5555
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 015174 379 LSLLSVVGAAWMFCHWLLN 397 (412)
Q Consensus 379 ~s~~~v~~~~~~~~~~~~~ 397 (412)
.+.+++.....+..++.-|
T Consensus 188 F~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 188 FGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHHHHHHHcc
Confidence 5555666666666666544
No 254
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=65.19 E-value=12 Score=38.87 Aligned_cols=158 Identities=15% Similarity=0.091 Sum_probs=86.6
Q ss_pred HHHHHHhcC------CCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcch
Q 015174 234 MTAFLTQRG------LNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNP 307 (412)
Q Consensus 234 ~~~y~~~~g------ls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~ 307 (412)
+..|+++.+ +|+...+.+-++.-+|-+.|-+.++++..|+|+++..-.......+|.+.+-.+...+++. ...
T Consensus 66 il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~-~~m 144 (538)
T KOG0252|consen 66 ILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPL-GVM 144 (538)
T ss_pred HHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCc-chh
Confidence 444665443 6788888889999999999999999999999999886644443333333211122222221 111
Q ss_pred HHHHHHHHHHhhhhhhhhh-hhhhHHhhccCCcccchhHHHHHHHHHHHHHH----HHHHHHHhc----cCCC---c--h
Q 015174 308 LLFFLCLIVLSRLGHMSYD-IVGAQILQTGIPSSKANLIGTTEISVASLVES----VMLGVAIIA----NDVS---H--F 373 (412)
Q Consensus 308 ~~l~~~g~~~sr~GLw~~d-l~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~l----l~~~~~~~~----~~~~---~--f 373 (412)
..++..=. .-++|. .-| ...+.++.|.--+..||.--+..-++|..--+ ...++...+ ++++ + -
T Consensus 145 ~~L~~~R~-~LGiGI-GGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~ 222 (538)
T KOG0252|consen 145 MTLCFFRF-LLGIGI-GGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDG 222 (538)
T ss_pred hHHHHHHH-Hhhccc-cCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHH
Confidence 12221100 002233 222 34556777777788888877776666654211 111222222 3321 2 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 015174 374 GFLATLSLLSVVGAAWMFCHW 394 (412)
Q Consensus 374 ~~l~~~s~~~v~~~~~~~~~~ 394 (412)
-|=..+.++++-+...+|..+
T Consensus 223 vWRl~~glg~vpa~~~ly~Rl 243 (538)
T KOG0252|consen 223 VWRIIFGLGAVPALLVLYFRL 243 (538)
T ss_pred HHHHHHHHHHHHHHHHHHhhh
Confidence 244555666666766776655
No 255
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=63.91 E-value=1.9e+02 Score=30.23 Aligned_cols=122 Identities=10% Similarity=-0.116 Sum_probs=75.2
Q ss_pred CCchhHHHhhHHHHHHHHH-HHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc-------------------
Q 015174 244 NPSIIGGFSGLCASMGVAA-TFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS------------------- 303 (412)
Q Consensus 244 s~~~~G~~~~~~avggllG-t~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~------------------- 303 (412)
+.+.+.++.....+...+. +.++.++.+|+++.|..-+-...-.....+.....++....
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3468999998887776666 99999999999998876554433223333322232321100
Q ss_pred -------CcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhcc
Q 015174 304 -------QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAN 368 (412)
Q Consensus 304 -------~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~ 368 (412)
.+....+++. .+-.|.-+..+.--+..-+.+.+++..|-.+..+...+...++...++..+.
T Consensus 121 ~~i~~~~~W~~~~FYv~---~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVM---AELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0111112211 1122332333344567888899999999999999999987777776665544
No 256
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=61.42 E-value=56 Score=32.22 Aligned_cols=106 Identities=17% Similarity=0.115 Sum_probs=62.0
Q ss_pred HHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhhhhhh
Q 015174 7 LILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVALGVA 86 (412)
Q Consensus 7 lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a~~~a 86 (412)
....+.+|.-|..+|+++|+-..+.+-..- . .++=. ...++.. .++. ...++|-.-.+-.-+.=.
T Consensus 311 ~Isav~spvfg~i~Dk~G~n~~wv~~a~~~-t--l~~H~--~l~Ft~l--------sPy~-~m~~lGLsysllAcslWP- 375 (459)
T KOG4686|consen 311 GISAVLSPVFGAISDKYGFNLWWVASACIL-T--LLGHS--GLFFTFL--------SPYT-SMTFLGLSYSLLACSLWP- 375 (459)
T ss_pred hhhhhhhhhHHHhHhhhcceehhHHHHHHH-H--HHHhh--hHHhhhc--------cHHH-HHHHHhhhHHHHHHHHhh-
Confidence 345677899999999999987755552210 0 00001 1111211 1222 222333222221111111
Q ss_pred hcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 015174 87 VERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYE 134 (412)
Q Consensus 87 i~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~ 134 (412)
-++.+++++ +|-.+.+.++.|...+-.+-|.++|.+.+.-|
T Consensus 376 ----~va~~vpE~---qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 376 ----CVASLVPEE---QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred ----hhhhhCCHH---HhcchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 134466643 89999999999999999999999999998765
No 257
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism]
Probab=60.77 E-value=1.8e+02 Score=30.30 Aligned_cols=104 Identities=20% Similarity=0.096 Sum_probs=65.2
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH-HHHHhcCCCcCcchHHHHHHHHHHhhhhhhhhhhhh
Q 015174 251 FSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMA-VAVYWSGSLSQQNPLLFFLCLIVLSRLGHMSYDIVG 329 (412)
Q Consensus 251 ~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~-v~~~~~g~~~~~~~~~l~~~g~~~sr~GLw~~dl~~ 329 (412)
-++.|.+.|+.|..+--++.+|+.+. .|+.....-...++.. +..+.-|+ .-+..++.| +
T Consensus 193 q~glG~l~G~~gg~l~~~~Inr~nLd-~GL~pil~la~~Ll~fs~t~aiGGs----G~LaVYl~G-------l------- 253 (574)
T COG3263 193 QFGLGLLLGLGGGKLLLQLINRINLD-SGLYPILALAGGLLIFSLTGAIGGS----GILAVYLAG-------L------- 253 (574)
T ss_pred HhhHHHHHHHHHHHHHHHHHHhhccc-cchhHHHHHHHHHHHHHHHHHhcCc----ccHHHHHHH-------H-------
Confidence 35788899999999999999999775 4443332211222211 11121222 112233332 2
Q ss_pred hHHhhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHH
Q 015174 330 AQILQTGIPSSKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFL 376 (412)
Q Consensus 330 ~~l~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l 376 (412)
.--+.|-+.|-..-..+.-+.+++.++++.+-.++-.|++++-.
T Consensus 254 ---l~GN~~i~~r~~I~~f~dG~twlaQI~MFlvLGLLvtPsql~~i 297 (574)
T COG3263 254 ---LLGNRPIRARHGILRFFDGLAWLAQILMFLVLGLLVTPSQLLPI 297 (574)
T ss_pred ---HhCCCcchhHHHHHHHhccHHHHHHHHHHHHHHHhcCHhhhhHh
Confidence 11222555666677778889999999999999999999999863
No 258
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=55.31 E-value=2.7e+02 Score=29.25 Aligned_cols=37 Identities=24% Similarity=0.192 Sum_probs=28.5
Q ss_pred hhhcccceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 015174 85 VAVERDWAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFG 127 (412)
Q Consensus 85 ~ai~RDwv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG 127 (412)
+|..-| ++.++ ++-+|+|+.--..+.+.+.+|=.+|+
T Consensus 164 ra~L~D----l~~~d--~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 164 RALLAD----LARGD--AKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHHH----hccCh--hhhhccchhHHHHHHhcceeeeeccc
Confidence 444445 77764 25566999999999999999888887
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=46.97 E-value=17 Score=27.80 Aligned_cols=27 Identities=26% Similarity=0.293 Sum_probs=21.3
Q ss_pred hHHHHHHhhhhhcchhccCCcHHHHHH
Q 015174 5 SKLILIVGGPLVGKLMDHSPRIPAYIC 31 (412)
Q Consensus 5 ~~lp~ll~g~~~G~~vDr~~R~~v~~~ 31 (412)
..+..++..|..|.++||.+|+|.+..
T Consensus 44 ~~~~~~~~~pl~g~laDk~~~~~~~l~ 70 (77)
T PF12832_consen 44 RPLIRFLAPPLWGFLADKFGKRKVILL 70 (77)
T ss_pred HHHHHHHHHHHHHHHHHHHCccHHHHH
Confidence 345567789999999999998887443
No 260
>PF13955 Fst_toxin: Toxin Fst, type I toxin-antitoxin system; PDB: 2KV5_A.
Probab=43.60 E-value=23 Score=20.21 Aligned_cols=17 Identities=18% Similarity=0.515 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHhhcC
Q 015174 118 CEIAGASLFGILLSKYE 134 (412)
Q Consensus 118 ~~llgP~lgG~L~~~~~ 134 (412)
..++||.+.|.++..++
T Consensus 2 ~~iIaPi~VGvvl~l~~ 18 (21)
T PF13955_consen 2 TTIIAPIVVGVVLTLFD 18 (21)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred ceehhhHHHHHHHHHHH
Confidence 46899999999887543
No 261
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=40.19 E-value=4.2e+02 Score=27.05 Aligned_cols=137 Identities=17% Similarity=0.148 Sum_probs=64.1
Q ss_pred HHHHH-hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHh---chhhH--HHHHHHHHHHHHHHHHHHHhcCCCcCcchH
Q 015174 235 TAFLT-QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRL---GILKA--GAAGLIFQASLLAMAVAVYWSGSLSQQNPL 308 (412)
Q Consensus 235 ~~y~~-~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~---g~~r~--~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~ 308 (412)
..|++ ++|++++++..+.+...+...+- .+++.+...+ |.+|. +.++.....+... .....+.... ....
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw~~K-p~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~--~~~~~~~~~~-s~~~ 88 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPWSIK-PLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSAL--VLALLPASES-SAAI 88 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCchHHh-hhHHhhcccccccCCcchHHHHHHHHHHHHHHH--HHHhcccccc-hhhh
Confidence 34555 69999999888777766654433 3344444433 33333 3334332211111 1122232111 1111
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhHHhhccC--CcccchhHHHHHHHHHHHHHHHHHHHH-HhccCCCchhHHH
Q 015174 309 LFFLCLIVLSRLGHMSYDIVGAQILQTGI--PSSKANLIGTTEISVASLVESVMLGVA-IIANDVSHFGFLA 377 (412)
Q Consensus 309 ~l~~~g~~~sr~GLw~~dl~~~~l~Q~~v--p~~~~G~v~g~~~sl~~~~~ll~~~~~-~~~~~~~~f~~l~ 377 (412)
....+.++.+|...-|+..-.+.-|.. .|+.+|..-+..........++...++ ......+......
T Consensus 89 --~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~ 158 (433)
T PF03092_consen 89 --AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFL 158 (433)
T ss_pred --HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEeh
Confidence 111233345566667765444433322 334477776666666665555555444 3334444444433
No 262
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=37.49 E-value=4.6e+02 Score=26.72 Aligned_cols=252 Identities=15% Similarity=0.034 Sum_probs=114.9
Q ss_pred ceeeecCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHH-HHHHHHhhhccc--cc
Q 015174 91 WAVLLAGINRPIALAKANAVLNRIDLLCEIAGASLFGILLSKYEPVTCLKFAAGLIMWSLPVM-IILTWFTNKISS--GV 167 (412)
Q Consensus 91 wv~~l~~~~~~~~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~~~~~~~~~~~~~~~~s~~~~-~~~l~~~~~~~~--~~ 167 (412)
|+=+.+++ ++..|.-+..|....+.+.+|-.++-++++...+-- ...|-.|+... +.+.... .+|. +.
T Consensus 118 YIYs~Vd~---~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy-----~~LN~ISL~~~~ia~~~A~-fLP~v~rS 188 (433)
T KOG3810|consen 118 YIYSKVDP---EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSY-----TTLNYISLAEVTIAVLLAL-FLPRVKRS 188 (433)
T ss_pred eeeeecCH---HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccch-----hhhchhhHHHHHHHHHHHh-hCCCCchh
Confidence 44445554 389999999999999999999999999998544321 12344444211 1111111 1221 11
Q ss_pred c-ccccccccc-cCCCCCCCCCCchhhhHHhHHHHHHhHHHHhcCCcchH-----HHHHHHHHHHhhhccchHHHHHHHh
Q 015174 168 L-DRAKCSQSC-CRTSNEGPVPDADNIVDVGIEAIKLGWKEYMQQPVLPA-----SLAYVLLCLNVVLTPGSLMTAFLTQ 240 (412)
Q Consensus 168 l-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~-----~~~~a~l~~t~v~~~~~~~~~y~~~ 240 (412)
+ -+.++.++. .+.++.++..+..+..+.....+.+.++..+++|.++- +++.+..| - +.. .+.+. .++
T Consensus 189 l~f~~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~-Q-V~n--Y~Q~L-W~~ 263 (433)
T KOG3810|consen 189 LYFHRLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYY-Q-VTN--YTQIL-WKE 263 (433)
T ss_pred hhhhcccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhH-H-HHH--HHHHH-HHh
Confidence 1 000111110 01111111111111223455666677778888987765 33333333 1 111 11111 222
Q ss_pred cC-CCC-chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHH--HHHHHHHHHHHHHHHhcCCCcCcchHHHHHHHHH
Q 015174 241 RG-LNP-SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAG--LIFQASLLAMAVAVYWSGSLSQQNPLLFFLCLIV 316 (412)
Q Consensus 241 ~g-ls~-~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~--~~~~~~~l~~~v~~~~~g~~~~~~~~~l~~~g~~ 316 (412)
.. =+. ..=|..=+..-..|..+++..+.+.-+..+.+...++ ...|..++..+ ...+. ... .=.|.+
T Consensus 264 ~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m---~~t~~---Iw~---~Ya~yv 334 (433)
T KOG3810|consen 264 VAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM---AQTQH---IWV---CYAGYV 334 (433)
T ss_pred hCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh---hcccc---eeh---hhhhHH
Confidence 21 111 1224444566666677777777775444443333322 22332222211 11111 111 111222
Q ss_pred HhhhhhhhhhhhhhHH-hhccCCcccchhHHHHHHHHHHHHHHHHHHHHHhccC
Q 015174 317 LSRLGHMSYDIVGAQI-LQTGIPSSKANLIGTTEISVASLVESVMLGVAIIAND 369 (412)
Q Consensus 317 ~sr~GLw~~dl~~~~l-~Q~~vp~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~ 369 (412)
+-| +.+.+-+++.+. .-++..+|.-|-+.|+.....-.. ..+++.+.-|
T Consensus 335 lfr-~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl~l---QsilT~iVvd 384 (433)
T KOG3810|consen 335 LFR-VIYQLTITIATFQIARNLSSELFGLVFGINTFVALIL---QSILTLIVVD 384 (433)
T ss_pred HHH-hhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHHHH---HHhheEEEEc
Confidence 212 222333333322 234457888899999887665443 3444444444
No 263
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=36.67 E-value=3.8e+02 Score=25.45 Aligned_cols=81 Identities=15% Similarity=0.051 Sum_probs=43.5
Q ss_pred hhhHHHHHHhhhhhcchhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHhhh
Q 015174 3 FFSKLILIVGGPLVGKLMDHSPRIPAYICLNTVQAAAQLLSAAMIIHAHTVIPTSSSMLLHPWFFVLVLAGAVERLTGVA 82 (412)
Q Consensus 3 ~~~~lp~ll~g~~~G~~vDr~~R~~v~~~~~~~q~~~v~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~a 82 (412)
++..+-. -+|.+.|.+.||++.+.++.+.-+.. .....+ .++......++ .-.|.+.+...+.+..+..++++
T Consensus 44 ~~~~~G~-~~G~~~G~l~d~~gp~~~l~iG~~~~----~~GY~~-~~l~~~~~i~~-~~~~~~~~~~~l~~~s~~~~~ta 116 (250)
T PF06813_consen 44 TAGDIGS-YFGILAGLLYDRFGPWVVLLIGAVLG----FVGYGL-LWLAVSGRIPS-LPVWLMCLFLFLGGNSSCWFNTA 116 (250)
T ss_pred HHHHHHh-hccHHHHHHHHhcchHHHHHHHHHHH----HHHHHH-HHHHHhCccCc-cchHHHHHHHHHHcccHHHhhhH
Confidence 4444444 36999999999999888766653322 112332 23322221111 11133344444555666777777
Q ss_pred hhhhhccc
Q 015174 83 LGVAVERD 90 (412)
Q Consensus 83 ~~~ai~RD 90 (412)
.-.+-.|.
T Consensus 117 ~lvt~~~N 124 (250)
T PF06813_consen 117 SLVTCVRN 124 (250)
T ss_pred HHHHHHHh
Confidence 66655564
No 264
>PRK03612 spermidine synthase; Provisional
Probab=36.54 E-value=5.4e+02 Score=27.21 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=22.8
Q ss_pred hcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 015174 240 QRGLNPSIIGGFSGLCASMGVAATFLSAYLVRR 272 (412)
Q Consensus 240 ~~gls~~~~G~~~~~~avggllGt~l~~~l~~R 272 (412)
..|-+...++.+.+.--.|.-+|+++.+++.++
T Consensus 44 ~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~ 76 (521)
T PRK03612 44 LLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRD 76 (521)
T ss_pred HhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 467777777777777766666777777776543
No 265
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=34.87 E-value=13 Score=39.63 Aligned_cols=134 Identities=11% Similarity=0.058 Sum_probs=2.3
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCc----------
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLS---------- 303 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~---------- 303 (412)
.+..-++.+++.++.|++.+..=++.++..+....+.+|-.+-|.+-+|.....+..++...+.+...+.
T Consensus 26 lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~ 105 (539)
T PF03137_consen 26 LTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNG 105 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccc
Confidence 4444457899999999999999999999999888888886666665555544333333333332211000
Q ss_pred -------------------------------CcchHHHHHHHHHHhhhhhhhhhhhhhHHhhccCCcccchhHHHHHHHH
Q 015174 304 -------------------------------QQNPLLFFLCLIVLSRLGHMSYDIVGAQILQTGIPSSKANLIGTTEISV 352 (412)
Q Consensus 304 -------------------------------~~~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q~~vp~~~~G~v~g~~~sl 352 (412)
.....++|+.|.++.++|---+=..-..++.++++++..+.-.|+..++
T Consensus 106 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~ 185 (539)
T PF03137_consen 106 NSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAM 185 (539)
T ss_dssp ----------------------------------------------SSS-------------------------------
T ss_pred ccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHH
Confidence 0113556667777777775333344556788999999999999999998
Q ss_pred HHHHHHHHHHHHHhc
Q 015174 353 ASLVESVMLGVAIIA 367 (412)
Q Consensus 353 ~~~~~ll~~~~~~~~ 367 (412)
...-+.+.++++...
T Consensus 186 ~~lGPa~Gf~lg~~~ 200 (539)
T PF03137_consen 186 SILGPALGFLLGSFC 200 (539)
T ss_dssp ---------------
T ss_pred hhccHHHHHHHHHHH
Confidence 888787777776544
No 266
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=30.90 E-value=74 Score=33.17 Aligned_cols=139 Identities=10% Similarity=0.031 Sum_probs=75.6
Q ss_pred HHHHHHhcCCCCchhHHHhhHHHHHHHHHH----HHHHHHHHHhchhhHHHHHHHHHHHHHHHHHH-HHh----cCCC-c
Q 015174 234 MTAFLTQRGLNPSIIGGFSGLCASMGVAAT----FLSAYLVRRLGILKAGAAGLIFQASLLAMAVA-VYW----SGSL-S 303 (412)
Q Consensus 234 ~~~y~~~~gls~~~~G~~~~~~avggllGt----~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~-~~~----~g~~-~ 303 (412)
.+-|+.++|++....+..-.++=+.|++-- ...-|-..|+|++|--++.......+.+..+. ... .+.- .
T Consensus 55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 556888899999999999988888777433 33455577899998766554432222222111 111 1110 0
Q ss_pred -Cc--chHHHHHHHHHHhhhhhhhhhhhhhHHhh-------ccC-CcccchhHHHHHHHHHHHHHHHHHHHHHhccC--C
Q 015174 304 -QQ--NPLLFFLCLIVLSRLGHMSYDIVGAQILQ-------TGI-PSSKANLIGTTEISVASLVESVMLGVAIIAND--V 370 (412)
Q Consensus 304 -~~--~~~~l~~~g~~~sr~GLw~~dl~~~~l~Q-------~~v-p~~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~--~ 370 (412)
+. ..+.++. +|.|..|++.+..+- ... ++++.=|+|+......-.-..+.|.++.-.+. .
T Consensus 135 ~~~~~rai~~~~-------lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~~~~~ 207 (498)
T KOG0637|consen 135 KPVKPRAIVLFI-------LGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLGLYKI 207 (498)
T ss_pred cccchHHHHHHH-------HHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccCceEE
Confidence 01 1233343 388999998855432 222 34333336655555554445555666644433 3
Q ss_pred CchhHHHHH
Q 015174 371 SHFGFLATL 379 (412)
Q Consensus 371 ~~f~~l~~~ 379 (412)
-+|.+...+
T Consensus 208 ~~Ft~~~~~ 216 (498)
T KOG0637|consen 208 FPFTLTTAC 216 (498)
T ss_pred eehHHHHHH
Confidence 444444333
No 267
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=30.57 E-value=3.9e+02 Score=23.75 Aligned_cols=112 Identities=18% Similarity=0.101 Sum_probs=64.4
Q ss_pred HHHHHHhcCCCC--chhHHHhhHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCcchHHHH
Q 015174 234 MTAFLTQRGLNP--SIIGGFSGLCASMGVAATFLSAYLVRRLGILKAGAAGLIFQASLLAMAVAVYWSGSLSQQNPLLFF 311 (412)
Q Consensus 234 ~~~y~~~~gls~--~~~G~~~~~~avggllGt~l~~~l~~R~g~~r~~~~~~~~~~~~l~~~v~~~~~g~~~~~~~~~l~ 311 (412)
...+..+.+.+. ...++..+...++...+....+++.+|.|+++....+....... .....+... .....+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~ 97 (338)
T COG0477 25 LPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLG--TLLLALAPN-----VGLALL 97 (338)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHH--HHHHHhCcc-----chHHHH
Confidence 444455555555 47899999999999999999999999998876665554321111 111121111 011111
Q ss_pred HHHHHHhhhhhhhhhhhhhHHhhccCCc-ccchhHHHHHHHH
Q 015174 312 LCLIVLSRLGHMSYDIVGAQILQTGIPS-SKANLIGTTEISV 352 (412)
Q Consensus 312 ~~g~~~sr~GLw~~dl~~~~l~Q~~vp~-~~~G~v~g~~~sl 352 (412)
...-...+++.-........+..+..|+ ++++...+.....
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 1111112223223555666666676777 6788888887774
No 268
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=30.30 E-value=7.6e+02 Score=27.02 Aligned_cols=48 Identities=10% Similarity=-0.048 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ChhHHHHHHHHHHHHHH
Q 015174 103 ALAKANAVLNRIDLLCEIAGASLFGILLSKY-------EPVTCLKFAAGLIMWSL 150 (412)
Q Consensus 103 ~L~~~Ns~l~~id~v~~llgP~lgG~L~~~~-------~~~~~~~~~~~~~~~s~ 150 (412)
+..+.-+.-=..-.+.-++++.+.+.+-... +|..+|.+.+...++++
T Consensus 121 ~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~ 175 (654)
T TIGR00926 121 LRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILAL 175 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHH
Confidence 3555555555556666788888888876432 57777766554444444
No 269
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=28.50 E-value=1.4e+02 Score=28.04 Aligned_cols=28 Identities=21% Similarity=0.190 Sum_probs=19.7
Q ss_pred CchhHHHhhHHHHHHHHHHHHHHHHHHH
Q 015174 245 PSIIGGFSGLCASMGVAATFLSAYLVRR 272 (412)
Q Consensus 245 ~~~~G~~~~~~avggllGt~l~~~l~~R 272 (412)
....-.+.++..+.++++-.++|..=..
T Consensus 107 ~~~~~~l~~~~~~~~v~a~~lFPlWP~~ 134 (224)
T PF03839_consen 107 SPLMQYLIGALLLVGVIAICLFPLWPRW 134 (224)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhcChHH
Confidence 4456677777777778888888876443
No 270
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=21.93 E-value=7.6e+02 Score=24.22 Aligned_cols=72 Identities=6% Similarity=-0.160 Sum_probs=31.6
Q ss_pred hhhhhhhhhhhhHHhhccCCc---ccchhHHHHHHHHHHHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHH
Q 015174 319 RLGHMSYDIVGAQILQTGIPS---SKANLIGTTEISVASLVESVMLGVAIIANDVSHFGFLATLSLLSVVGAAWMFC 392 (412)
Q Consensus 319 r~GLw~~dl~~~~l~Q~~vp~---~~~G~v~g~~~sl~~~~~ll~~~~~~~~~~~~~f~~l~~~s~~~v~~~~~~~~ 392 (412)
+.|. +-.+...+.-+..++ +++.+........-+.-.++.........+...+.+...++..+...+...|.
T Consensus 46 G~G~--~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 46 GTGG--IKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHC--CHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHH
T ss_pred cccc--ccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHH
Confidence 4455 444444443333333 34444444444444444444444444444444444444444444444444433
No 271
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=20.96 E-value=1.6e+02 Score=18.85 Aligned_cols=26 Identities=19% Similarity=0.245 Sum_probs=18.9
Q ss_pred hhHHHh----hHHHHHHHHHHHHHHHHHHH
Q 015174 247 IIGGFS----GLCASMGVAATFLSAYLVRR 272 (412)
Q Consensus 247 ~~G~~~----~~~avggllGt~l~~~l~~R 272 (412)
++|+.+ ++-.+.|++.+.+-.++.+|
T Consensus 5 qlg~~~WhDLAAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 5 QLGIAFWHDLAAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHhc
Confidence 445554 66778888888888888776
No 272
>PRK03612 spermidine synthase; Provisional
Probab=20.86 E-value=1e+03 Score=25.18 Aligned_cols=44 Identities=20% Similarity=0.274 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcChhHHHHHHHHHHH
Q 015174 104 LAKANAVLNRIDLLCEIAGASLFGILLS-KYEPVTCLKFAAGLIM 147 (412)
Q Consensus 104 L~~~Ns~l~~id~v~~llgP~lgG~L~~-~~~~~~~~~~~~~~~~ 147 (412)
..+.-+++-..|.+..++|+++.|.++- ++|...+..+.+..|+
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~ 187 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNL 187 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 5566788888999999999999998887 6776654444444443
Done!