Query 015176
Match_columns 412
No_of_seqs 87 out of 89
Neff 3.6
Searched_HMMs 46136
Date Fri Mar 29 03:49:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015176.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015176hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF05703 Auxin_canalis: Auxin 100.0 2.4E-80 5.2E-85 588.7 17.9 224 32-281 1-241 (242)
2 PF08458 PH_2: Plant pleckstri 100.0 4.9E-54 1.1E-58 368.2 12.7 109 303-411 1-109 (110)
3 PF12814 Mcp5_PH: Meiotic cell 97.3 0.0041 8.9E-08 54.1 11.3 110 296-406 6-122 (123)
4 smart00233 PH Pleckstrin homol 96.7 0.016 3.4E-07 43.5 8.9 98 301-405 3-101 (102)
5 PF00169 PH: PH domain; Inter 96.4 0.046 9.9E-07 42.1 9.5 94 301-405 3-103 (104)
6 cd01250 PH_centaurin Centaurin 95.4 0.17 3.7E-06 39.7 9.0 92 301-403 1-93 (94)
7 cd00821 PH Pleckstrin homology 94.9 0.16 3.6E-06 37.6 7.5 33 371-403 62-95 (96)
8 cd01249 PH_oligophrenin Oligop 93.1 0.74 1.6E-05 40.3 8.8 93 301-402 1-102 (104)
9 cd01219 PH_FGD FGD (faciogenit 93.0 1.1 2.3E-05 37.5 9.5 95 301-406 4-100 (101)
10 cd01235 PH_SETbf Set binding f 92.8 1.3 2.8E-05 35.7 9.5 35 370-404 66-100 (101)
11 cd01220 PH_CDEP Chondrocyte-de 92.7 1.2 2.6E-05 37.8 9.4 94 301-405 4-97 (99)
12 cd01261 PH_SOS Son of Sevenles 90.8 2 4.3E-05 37.7 8.9 95 300-406 5-110 (112)
13 cd00900 PH-like Pleckstrin hom 89.8 4.5 9.9E-05 30.1 9.2 33 371-403 63-98 (99)
14 cd01233 Unc104 Unc-104 pleckst 88.1 4.1 8.8E-05 33.9 8.6 94 300-404 3-97 (100)
15 cd01254 PH_PLD Phospholipase D 86.8 1 2.2E-05 39.1 4.3 34 371-404 88-121 (121)
16 cd01251 PH_centaurin_alpha Cen 85.8 7.6 0.00017 32.6 9.0 33 374-406 69-101 (103)
17 cd01265 PH_PARIS-1 PARIS-1 ple 84.8 7.6 0.00016 32.1 8.5 32 372-403 61-92 (95)
18 cd01248 PH_PLC Phospholipase C 81.6 9.5 0.00021 32.4 8.0 99 297-404 4-115 (115)
19 cd01246 PH_oxysterol_bp Oxyste 78.0 21 0.00045 27.7 8.3 88 302-403 2-90 (91)
20 cd01238 PH_Tec Tec pleckstrin 73.6 34 0.00074 28.9 9.0 32 372-403 74-105 (106)
21 cd01264 PH_melted Melted pleck 73.5 6.2 0.00013 34.1 4.6 32 372-403 68-99 (101)
22 PLN02958 diacylglycerol kinase 73.1 8.3 0.00018 41.0 6.4 81 306-406 24-106 (481)
23 cd01260 PH_CNK Connector enhan 71.8 32 0.00069 27.8 8.2 33 371-403 62-95 (96)
24 cd01257 PH_IRS Insulin recepto 70.9 7.3 0.00016 33.3 4.4 33 372-404 69-101 (101)
25 cd01252 PH_cytohesin Cytohesin 70.1 43 0.00092 28.7 9.0 27 382-408 90-116 (125)
26 cd01230 PH_EFA6 EFA6 Pleckstri 70.0 27 0.00058 30.8 7.8 34 371-404 75-110 (117)
27 cd01218 PH_phafin2 Phafin2 Pl 66.1 56 0.0012 28.3 8.9 34 372-405 65-98 (104)
28 cd01247 PH_GPBP Goodpasture an 65.7 9.5 0.00021 31.6 4.0 32 372-403 58-90 (91)
29 cd01222 PH_clg Clg (common-sit 64.0 21 0.00047 30.5 5.9 34 372-405 59-95 (97)
30 PF15410 PH_9: Pleckstrin homo 63.7 17 0.00036 31.4 5.3 91 307-403 17-116 (119)
31 cd01227 PH_Dbs Dbs (DBL's big 61.5 85 0.0019 28.5 9.5 39 371-409 79-119 (133)
32 cd01224 PH_Collybistin Collybi 58.9 89 0.0019 27.7 8.9 94 302-402 5-104 (109)
33 cd01244 PH_RasGAP_CG9209 RAS_G 54.7 1.1E+02 0.0025 26.0 8.7 30 374-403 68-97 (98)
34 PF15413 PH_11: Pleckstrin hom 54.2 17 0.00038 31.0 3.8 33 371-403 79-111 (112)
35 cd01266 PH_Gab Gab (Grb2-assoc 50.9 1.3E+02 0.0028 25.2 8.5 30 375-404 78-107 (108)
36 cd01236 PH_outspread Outspread 50.6 29 0.00063 29.9 4.6 32 371-402 70-101 (104)
37 cd01237 Unc112 Unc-112 pleckst 43.6 34 0.00074 30.2 3.9 21 382-402 80-100 (106)
38 cd01232 PH_TRIO Trio pleckstri 43.3 2.3E+02 0.005 24.9 9.1 36 371-406 73-113 (114)
39 PTZ00283 serine/threonine prot 42.6 51 0.0011 34.6 5.8 99 300-407 374-491 (496)
40 cd01234 PH_CADPS CADPS (Ca2+-d 41.3 38 0.00082 30.5 3.9 50 352-403 58-108 (117)
41 cd01253 PH_beta_spectrin Beta- 39.3 2.1E+02 0.0046 23.3 7.9 31 373-403 72-103 (104)
42 cd01245 PH_RasGAP_CG5898 RAS G 36.5 2.5E+02 0.0054 24.1 8.0 89 303-403 3-97 (98)
43 PF15409 PH_8: Pleckstrin homo 35.2 60 0.0013 27.7 4.0 33 371-403 55-87 (89)
44 KOG4424 Predicted Rho/Rac guan 31.4 89 0.0019 35.0 5.5 105 289-405 262-369 (623)
45 KOG4598 Putative ubiquitin-spe 30.7 11 0.00024 43.0 -1.3 38 7-54 1035-1072(1203)
46 PTZ00267 NIMA-related protein 28.3 1.7E+02 0.0036 30.4 6.7 96 299-405 377-476 (478)
47 cd01221 PH_ephexin Ephexin Ple 24.1 4E+02 0.0086 24.1 7.5 99 299-402 3-119 (125)
48 cd01243 PH_MRCK MRCK (myotonic 23.8 1.3E+02 0.0028 27.4 4.3 36 370-405 77-119 (122)
49 PF08772 NOB1_Zn_bind: Nin one 21.1 47 0.001 27.5 1.0 37 300-336 19-55 (73)
50 COG3602 Uncharacterized protei 20.0 45 0.00097 30.5 0.7 41 219-261 57-97 (134)
No 1
>PF05703 Auxin_canalis: Auxin canalisation; InterPro: IPR008546 This domain consists of several plant proteins of unknown function.
Probab=100.00 E-value=2.4e-80 Score=588.75 Aligned_cols=224 Identities=54% Similarity=0.694 Sum_probs=190.7
Q ss_pred CCCCcchhhhhcccccccHHHHHHhcccCCCCC-CCc--CCCC-----CCCCCCcccccccccccccccC-------CCC
Q 015176 32 PETPTESMEFLARSWSLSAMELSTALSTTHVSL-NSL--DIDK-----TPPSSDVEACGASSTVLTESVA-------NEG 96 (412)
Q Consensus 32 PetP~epMEFLSRSWS~SA~evskaL~~~~~~~-~~~--~~~~-----~~~~~~~~~~~as~~t~~~~~~-------~~~ 96 (412)
||||+|||||||||||+||+||||+|++.+... ... +.+. ....+++|+ |++..|+++++. ...
T Consensus 1 PETP~EPMEFLSRSWSvSAsEVSKAL~~~s~~~~ss~~~~~~~~~~~~~~~~~~~~s-~~~~~t~~lv~~~~~~~~~~~~ 79 (242)
T PF05703_consen 1 PETPREPMEFLSRSWSVSASEVSKALSPPSNRSISSFIDPEDAESDNDKDRFGSSFS-FASSATSQLVMDRIMSQSSGAD 79 (242)
T ss_pred CCCCcccHHHHHHhhhhhHHHHhhhcCCcccccccccccccchhccccccccCCCCC-cccccCcccccccccccccccC
Confidence 899999999999999999999999999843221 111 1111 122456777 888888888753 355
Q ss_pred CCCCCCCChhhHHHHHHHhhccCccccccchhhcccccccccCccccchhhhhhHHHhHHHHHhhhhhhhHHHhHHHHHH
Q 015176 97 SAPISPRDSEEMREIFVLHQALHPEFLSSQPLLKNGLYKSIMRGRTMGRWLKDQKERKKQEIRAHNAQLHAAVSVVGVAA 176 (412)
Q Consensus 97 ~p~~sp~~~~d~k~~~~~~~~~~p~~~~~~~~~~~~~~r~~~~g~tvgrW~k~~k~KKKee~R~~nAqvHAAVSVAgvAA 176 (412)
+||++|++.++.+.++.. .++++|||||||+|+|||||+|+||||||||||||||||
T Consensus 80 spp~sp~~~~~~~~~~~~-----------------------~~~~~i~~w~~~~~~kkkee~R~~~A~vhaAvSVA~vAa 136 (242)
T PF05703_consen 80 SPPISPRDLDDSKKIIRA-----------------------NGGKTIGRWLKDRKEKKKEEARAHNAQVHAAVSVAGVAA 136 (242)
T ss_pred CCCcchhhHHHHHHHHHh-----------------------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999876665533211 168899999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccchhhcccccchhhHHHHhHHHHHHHhHHHHHHhcCCCchhHHHHhhhhhcccCCChhHHHhHHHHh
Q 015176 177 AIAAITAATTTSQEMTTVQQKSSCKTSAAVASAAALVASHCIEIAEDMGADHDQILTVVNSAVNARTNGDIMTLTAGAAT 256 (412)
Q Consensus 177 AvAAvaAa~a~~~~~~~~~~~~~~k~~~a~ASAa~LvAa~C~e~AE~~GA~rd~vasaV~sav~~~S~gDimTLTAaAAT 256 (412)
|||||+++++.+++.+ .+++++||++||||||+|||+||+|+||.|||+||||+++|+||||+||+||||||||+|||
T Consensus 137 avAavaa~~~~~~~~~--~~~~~~k~~~avASAa~LvAa~C~e~Ae~~GA~~~~v~s~v~sav~~~s~gdi~TLTAaAAT 214 (242)
T PF05703_consen 137 AVAAVAAATAASSSSG--KDESSSKMDAAVASAAALVAAQCAEAAEAAGADRDQVASAVRSAVNVRSPGDIMTLTAAAAT 214 (242)
T ss_pred HHHHHHhhcccccCCC--ccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHhcCCCchHHHHHHHHHHh
Confidence 9999999999765543 24568999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHhhccc--Ccccccccc
Q 015176 257 ALRGAATLRARLQKGY--GMTTISLAE 281 (412)
Q Consensus 257 aLRGAAtLKaR~~ke~--~aav~P~~~ 281 (412)
|||||||||+|++||+ +|+|+|||+
T Consensus 215 aLRGaa~Lk~R~~ke~~~~a~v~P~e~ 241 (242)
T PF05703_consen 215 ALRGAATLKARAQKEARSNAAVLPYEK 241 (242)
T ss_pred cCchHHHHHHHHhhhhhcccccccCCC
Confidence 9999999999999999 599999976
No 2
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=100.00 E-value=4.9e-54 Score=368.22 Aligned_cols=109 Identities=57% Similarity=0.962 Sum_probs=106.6
Q ss_pred ceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEEecCe
Q 015176 303 GELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIKTADR 382 (412)
Q Consensus 303 ~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLkTa~g 382 (412)
||||||||||+||||+||||||+++|||||||||||+|||||||||||+|||+|+||||||+..+++++++||||+|++|
T Consensus 1 ~eLlk~tr~G~l~~k~Vsvyink~~qVilKmKskhv~Gafskkkk~VV~~V~~~~~awpgr~~~e~~~~~~yfgL~T~~G 80 (110)
T PF08458_consen 1 GELLKRTRKGDLHWKTVSVYINKKGQVILKMKSKHVGGAFSKKKKSVVLDVCSEIPAWPGRELREDGEERRYFGLKTAQG 80 (110)
T ss_pred CcceEecCCCceEEEEEEEEECCCcEEEEEeecchhhhhhhcCCceEEEEEccCcccCCCcccccCCceEEEEEEEecCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeCCcchhhhHHHHHHHHHhhhhcC
Q 015176 383 VIEFECRNKGDKQMWVEGIQHILNCCANL 411 (412)
Q Consensus 383 ~vEfec~s~~~~q~W~~gI~~lL~~~~~~ 411 (412)
+|||||+||+|||+|++||++||++++.-
T Consensus 81 ~vEfec~~~~~~k~W~~gI~~mL~~~~~~ 109 (110)
T PF08458_consen 81 VVEFECDSQREYKRWVQGIQHMLSQVAEK 109 (110)
T ss_pred EEEEEeCChhhHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999999998753
No 3
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.27 E-value=0.0041 Score=54.08 Aligned_cols=110 Identities=16% Similarity=0.209 Sum_probs=66.0
Q ss_pred cccccccceeeeeccCC------ceeeEEEEEEeCCCcEEEEEecccccccccccccee-EEEeeecCCCCCCCCCCCCC
Q 015176 296 LNLVSKGGELLKRTRKG------ALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKC-IVSAVICDIPRWPPRESEDD 368 (412)
Q Consensus 296 ~~~l~kg~eLlkrtrkG------~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~-vV~~V~~~~pawpgr~~~~~ 368 (412)
...+..|..|+|.+|+| .-|.|-+=|-++. ..+.=.=+..........+.++ .+.+|..=.+.=|....+..
T Consensus 6 i~~~~~G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~-~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~ 84 (123)
T PF12814_consen 6 ITQLMIGEWLYKYTRKGRSGISEKPHRRYFWVDPYT-RTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKK 84 (123)
T ss_pred HHHhhcccEEEEEcccccCccCCCcEEEEEEEeCCC-CEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccc
Confidence 34567899999999999 7777766555543 3322222111222223333333 33334322211122111111
Q ss_pred CCceeEEEEEecCeeEEEEeCCcchhhhHHHHHHHHHh
Q 015176 369 SEQRAYFGIKTADRVIEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 369 ~~~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
.+...-|.|.|..+.|.|.|.+..++++|.+|++.|+.
T Consensus 85 ~~~~~si~i~t~~R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 85 PDHNKSIIIVTPDRSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred cccceEEEEEcCCeEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 12333378899999999999999999999999999985
No 4
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=96.74 E-value=0.016 Score=43.49 Aligned_cols=98 Identities=21% Similarity=0.379 Sum_probs=62.2
Q ss_pred ccceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEEec
Q 015176 301 KGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIKTA 380 (412)
Q Consensus 301 kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLkTa 380 (412)
+.|.|+++.+.+...|+.+-+.+.. .++.--+.++-..-.......-+.++.-.. +.+. +......+|-|.+.
T Consensus 3 ~~G~l~~~~~~~~~~~~~~~~~L~~--~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~----~~~~-~~~~~~~~f~l~~~ 75 (102)
T smart00233 3 KEGWLYKKSGGKKKSWKKRYFVLFN--STLLYYKSEKAKKDYKPKGSIDLSGITVRE----APDP-DSAKKPHCFEIKTA 75 (102)
T ss_pred eeEEEEEeCCCccCCceEEEEEEEC--CEEEEEeCCCccccCCCceEEECCcCEEEe----CCCC-ccCCCceEEEEEec
Confidence 5788999888677789998888876 333334544432112222222233321111 1000 01235578999999
Q ss_pred Ce-eEEEEeCCcchhhhHHHHHHHHH
Q 015176 381 DR-VIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 381 ~g-~vEfec~s~~~~q~W~~gI~~lL 405 (412)
++ .+.|.|.|..+.+.|.+.|+..+
T Consensus 76 ~~~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 76 DRRSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHhh
Confidence 98 99999999999999999998765
No 5
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=96.36 E-value=0.046 Score=42.12 Aligned_cols=94 Identities=20% Similarity=0.335 Sum_probs=62.3
Q ss_pred ccceeeeeccCCceeeEEEEEEeCCCcEEEEEecccc------ccccccccceeEEEeeecCCCCCCCCCCCCCCCceeE
Q 015176 301 KGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKH------MAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAY 374 (412)
Q Consensus 301 kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskh------v~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~Y 374 (412)
+.|.|++++ .+.-.|+..=+.+.. +++ +=-++.. ..|.+.-..= .|....+.. .....+...+
T Consensus 3 ~~G~L~~~~-~~~~~wk~r~~vL~~-~~L-~~~~~~~~~~~~~~~~~i~l~~~-~v~~~~~~~-------~~~~~~~~~~ 71 (104)
T PF00169_consen 3 KEGWLLKKS-SSRKKWKKRYFVLRD-SYL-LYYKSSKDKSDSKPKGSIPLDDC-TVRPDPSSD-------FLSNKKRKNC 71 (104)
T ss_dssp EEEEEEEEE-SSSSSEEEEEEEEET-TEE-EEESSTTTTTESSESEEEEGTTE-EEEEETSST-------STSTSSSSSE
T ss_pred EEEEEEEEC-CCCCCeEEEEEEEEC-CEE-EEEecCccccceeeeEEEEecCc-eEEEcCccc-------cccccCCCcE
Confidence 578999999 777888888888865 333 3333332 1222322222 222221111 0133457788
Q ss_pred EEEEecCe-eEEEEeCCcchhhhHHHHHHHHH
Q 015176 375 FGIKTADR-VIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 375 FgLkTa~g-~vEfec~s~~~~q~W~~gI~~lL 405 (412)
|-|.|..+ .+.|.|+|..+++.|++.|+..+
T Consensus 72 f~i~~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 72 FEITTPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp EEEEETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999997 99999999999999999999875
No 6
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.37 E-value=0.17 Score=39.72 Aligned_cols=92 Identities=22% Similarity=0.343 Sum_probs=58.0
Q ss_pred ccceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEe-eecCCCCCCCCCCCCCCCceeEEEEEe
Q 015176 301 KGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSA-VICDIPRWPPRESEDDSEQRAYFGIKT 379 (412)
Q Consensus 301 kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~-V~~~~pawpgr~~~~~~~~r~YFgLkT 379 (412)
+.|-|+|++++|.-.|+..=+.+. .+.+++-...... .......+-+. +..+. ..+..+....|-|.|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~-~~~l~~y~~~~~~---~~~~~~~i~l~~~~v~~-------~~~~~~~~~~f~i~~ 69 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLK-NGQLTYHHRLKDY---DNAHVKEIDLRRCTVRH-------NGKQPDRRFCFEVIS 69 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEe-CCeEEEEcCCccc---ccccceEEeccceEEec-------CccccCCceEEEEEc
Confidence 468899999887667888877776 4666664433321 00111111111 11111 111112456799999
Q ss_pred cCeeEEEEeCCcchhhhHHHHHHH
Q 015176 380 ADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 380 a~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
..+.+.|..+|..+.+.|+..|++
T Consensus 70 ~~~~~~f~a~s~~~~~~Wi~al~~ 93 (94)
T cd01250 70 PTKTWHFQADSEEERDDWISAIQE 93 (94)
T ss_pred CCcEEEEECCCHHHHHHHHHHHhc
Confidence 999999999999999999999864
No 7
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.95 E-value=0.16 Score=37.62 Aligned_cols=33 Identities=24% Similarity=0.624 Sum_probs=29.9
Q ss_pred ceeEEEEEecC-eeEEEEeCCcchhhhHHHHHHH
Q 015176 371 QRAYFGIKTAD-RVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 371 ~r~YFgLkTa~-g~vEfec~s~~~~q~W~~gI~~ 403 (412)
...+|-|.+.. ..+.|.|.|..+++.|.+.|+.
T Consensus 62 ~~~~f~i~~~~~~~~~~~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 62 RKNCFEIRTPDGRSYLLQAESEEEREEWIEALQS 95 (96)
T ss_pred CCcEEEEecCCCcEEEEEeCCHHHHHHHHHHHhc
Confidence 56889999888 8999999999999999999874
No 8
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=93.05 E-value=0.74 Score=40.25 Aligned_cols=93 Identities=17% Similarity=0.372 Sum_probs=58.5
Q ss_pred ccceeeeeccCCcee--eEEEEEEeCCCcEE----EEEecc-ccccccccccceeEEEeeecCCCCCCCCCCCCCCCcee
Q 015176 301 KGGELLKRTRKGALH--WKQVSFNINSNLQV----VAKLKS-KHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRA 373 (412)
Q Consensus 301 kg~eLlkrtrkG~lh--wk~Vsvyin~~~qV----ilKmks-khv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~ 373 (412)
+.|=|+.++.++ ++ |-..-+...+.+.+ ...-+| +.++|.. .....++|-.+. +...+.-|.|-
T Consensus 1 k~GYLy~~~k~~-~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v---~~~e~~~l~sc~-----~r~~~~~dRRF 71 (104)
T cd01249 1 KEGYLYMQEKSK-FGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAV---AQDETLTLKSCS-----RRKTESIDKRF 71 (104)
T ss_pred CCceEEEEcCCC-CCCeEEEEEEEEEcCCcEEEEEecccccccccCccc---ccceEEeeeecc-----ccccCCcccee
Confidence 467899999766 55 65544444443333 344443 2233332 355667776664 23333435666
Q ss_pred EEEEEecC--eeEEEEeCCcchhhhHHHHHH
Q 015176 374 YFGIKTAD--RVIEFECRNKGDKQMWVEGIQ 402 (412)
Q Consensus 374 YFgLkTa~--g~vEfec~s~~~~q~W~~gI~ 402 (412)
+|-|.+.+ |.+-|...|+.+++.|.+.|.
T Consensus 72 CFei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 72 CFDVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred eEeeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 69995555 699999999999999998874
No 9
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=92.99 E-value=1.1 Score=37.54 Aligned_cols=95 Identities=22% Similarity=0.360 Sum_probs=55.7
Q ss_pred ccceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccc-cc-cccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEE
Q 015176 301 KGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHM-AG-AFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIK 378 (412)
Q Consensus 301 kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv-~G-afskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLk 378 (412)
|.|.|+|..++.. .|+.-=+|+=.+--+.-| .++. +| -|..+..--|.++.-.. . ++.+...-|-|.
T Consensus 4 keG~L~K~~~~~~-~~k~RyffLFnd~Ll~~~--~~~~~~~~~y~~~~~i~l~~~~v~~-------~-~~~~~~~~F~I~ 72 (101)
T cd01219 4 KEGSVLKISSTTE-KTEERYLFLFNDLLLYCV--PRKMIGGSKFKVRARIDVSGMQVCE-------G-DNLERPHSFLVS 72 (101)
T ss_pred cceEEEEEecCCC-CceeEEEEEeCCEEEEEE--cccccCCCcEEEEEEEecccEEEEe-------C-CCCCcCceEEEe
Confidence 6899999987652 455555666332333333 3322 12 23322222222222110 0 011223349999
Q ss_pred ecCeeEEEEeCCcchhhhHHHHHHHHHh
Q 015176 379 TADRVIEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 379 Ta~g~vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
+.+..++|-|++..+++.|.+.|+..+.
T Consensus 73 ~~~rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 73 GKQRCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred cCCcEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998653
No 10
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=92.84 E-value=1.3 Score=35.73 Aligned_cols=35 Identities=31% Similarity=0.614 Sum_probs=31.4
Q ss_pred CceeEEEEEecCeeEEEEeCCcchhhhHHHHHHHH
Q 015176 370 EQRAYFGIKTADRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 370 ~~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
....+|.|.|..++..|.+++..+.+.|++.|+.+
T Consensus 66 ~~~~~f~i~t~~r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 66 SRKGFFDLKTSKRTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred CCceEEEEEeCCceEEEECCCHHHHHHHHHHHHhh
Confidence 35578999999999999999999999999999864
No 11
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=92.67 E-value=1.2 Score=37.77 Aligned_cols=94 Identities=19% Similarity=0.259 Sum_probs=55.6
Q ss_pred ccceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEEec
Q 015176 301 KGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIKTA 380 (412)
Q Consensus 301 kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLkTa 380 (412)
|.|.|+|..|+| .+.|..-. .|. +|=.-+++. +.+.++.|.+..+=---. =++.++..+....|-|.+.
T Consensus 4 kEG~L~K~~~k~-~~~R~~FL-FnD----~LlY~~~~~----~~~~~y~~~~~i~L~~~~-V~~~~~~~~~~~~F~I~~~ 72 (99)
T cd01220 4 RQGCLLKLSKKG-LQQRMFFL-FSD----LLLYTSKSP----TDQNSFRILGHLPLRGML-TEESEHEWGVPHCFTIFGG 72 (99)
T ss_pred eEEEEEEEeCCC-CceEEEEE-ccc----eEEEEEeec----CCCceEEEEEEEEcCceE-EeeccCCcCCceeEEEEcC
Confidence 789999999998 44454333 343 122223322 233445555443210000 0001111122356999999
Q ss_pred CeeEEEEeCCcchhhhHHHHHHHHH
Q 015176 381 DRVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 381 ~g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
+..+.|-+.+..+++.|.+.|+.-+
T Consensus 73 ~ks~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 73 QCAITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred CeEEEEECCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998754
No 12
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=90.79 E-value=2 Score=37.69 Aligned_cols=95 Identities=21% Similarity=0.290 Sum_probs=55.9
Q ss_pred cccceeeeecc-CCceeeEEEEEEeCCCcEEEE---Eeccccccc----cccccceeEEEeee-cCCCCCCCCCCCCCCC
Q 015176 300 SKGGELLKRTR-KGALHWKQVSFNINSNLQVVA---KLKSKHMAG----AFTKKKKCIVSAVI-CDIPRWPPRESEDDSE 370 (412)
Q Consensus 300 ~kg~eLlkrtr-kG~lhwk~Vsvyin~~~qVil---Kmkskhv~G----afskkkk~vV~~V~-~~~pawpgr~~~~~~~ 370 (412)
-++|+|.+.++ +|..+=|.+..| | +++|+ +..+.++-| .|.=|-+..+.++. .|+ .+ ++
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLF-d--~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~--------~d-~~ 72 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLF-D--GLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDK--------PD-SS 72 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEe-c--CeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEc--------CC-Cc
Confidence 36788888774 566665555554 2 35665 333334433 34433332222221 121 11 12
Q ss_pred c-eeEEEEEec-CeeEEEEeCCcchhhhHHHHHHHHHh
Q 015176 371 Q-RAYFGIKTA-DRVIEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 371 ~-r~YFgLkTa-~g~vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
+ ..-|-|.|. +..++|-|++..+++.|.+.+..++.
T Consensus 73 ~~knaF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~~~ 110 (112)
T cd01261 73 EYKNAFEIILKDGNSVIFSAKNAEEKNNWMAALISVQT 110 (112)
T ss_pred ccCceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHHhc
Confidence 2 344888876 46799999999999999999987654
No 13
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=89.84 E-value=4.5 Score=30.09 Aligned_cols=33 Identities=33% Similarity=0.603 Sum_probs=28.9
Q ss_pred ceeEEEEEec---CeeEEEEeCCcchhhhHHHHHHH
Q 015176 371 QRAYFGIKTA---DRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 371 ~r~YFgLkTa---~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
....|.|.+. .+.+.|.|.+..+.+.|.+.|++
T Consensus 63 ~~~~F~i~~~~~~~~~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 63 DPNCFAIVTKDRGRRVFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred CCceEEEECCCCCcEEEEEEcCCHHHHHHHHHHHhc
Confidence 4467999988 68999999999999999999875
No 14
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=88.14 E-value=4.1 Score=33.87 Aligned_cols=94 Identities=14% Similarity=0.132 Sum_probs=55.5
Q ss_pred cccceeeeeccCCceeeEEEEEEeCCCcEEEEEecc-ccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEE
Q 015176 300 SKGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKS-KHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIK 378 (412)
Q Consensus 300 ~kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmks-khv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLk 378 (412)
-|.|-|.|+.... -.||.-=+.+..+-=..-|=.+ ...-|.+.-. .+.|.-+ .|. .........|.|.
T Consensus 3 ~k~G~L~Kkg~~~-k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~-~~~v~~~-~~~--------~~~~~~~~~F~I~ 71 (100)
T cd01233 3 SKKGYLNFPEETN-SGWTRRFVVVRRPYLHIYRSDKDPVERGVINLS-TARVEHS-EDQ--------AAMVKGPNTFAVC 71 (100)
T ss_pred ceeEEEEeeCCCC-CCcEEEEEEEECCEEEEEccCCCccEeeEEEec-ccEEEEc-cch--------hhhcCCCcEEEEE
Confidence 3668888876644 4588777777652222222211 2333444433 2222211 110 0000123569999
Q ss_pred ecCeeEEEEeCCcchhhhHHHHHHHH
Q 015176 379 TADRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 379 Ta~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
|..++..|.|+|+.+.+.|.+.|+..
T Consensus 72 t~~rt~~~~A~s~~e~~~Wi~ai~~~ 97 (100)
T cd01233 72 TKHRGYLFQALSDKEMIDWLYALNPL 97 (100)
T ss_pred CCCCEEEEEcCCHHHHHHHHHHhhhh
Confidence 99999999999999999999999764
No 15
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=86.76 E-value=1 Score=39.13 Aligned_cols=34 Identities=18% Similarity=0.517 Sum_probs=29.9
Q ss_pred ceeEEEEEecCeeEEEEeCCcchhhhHHHHHHHH
Q 015176 371 QRAYFGIKTADRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 371 ~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
.+.-|-|.|.+++++|.|+|..+.+.|++.|+.+
T Consensus 88 ~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 88 LRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred CceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 3445888999999999999999999999999863
No 16
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=85.78 E-value=7.6 Score=32.64 Aligned_cols=33 Identities=24% Similarity=0.607 Sum_probs=31.0
Q ss_pred EEEEEecCeeEEEEeCCcchhhhHHHHHHHHHh
Q 015176 374 YFGIKTADRVIEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 374 YFgLkTa~g~vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
.|-|.|..++..|.|++..+.+.|++.|++-|.
T Consensus 69 ~F~i~t~~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 69 GVTLVTPERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred eEEEEeCCeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 699999999999999999999999999999775
No 17
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=84.85 E-value=7.6 Score=32.13 Aligned_cols=32 Identities=19% Similarity=0.529 Sum_probs=29.8
Q ss_pred eeEEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 372 RAYFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 372 r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
...|-|.|..++..|.|+|..+.+.|++.|+.
T Consensus 61 ~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~ 92 (95)
T cd01265 61 KGRFEIHSNNEVIALKASSDKQMNYWLQALQS 92 (95)
T ss_pred CCEEEEEcCCcEEEEECCCHHHHHHHHHHHHh
Confidence 45799999999999999999999999999986
No 18
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=81.60 E-value=9.5 Score=32.39 Aligned_cols=99 Identities=16% Similarity=0.291 Sum_probs=54.9
Q ss_pred ccccccceeeeeccCCceeeEEEEEEeCC-CcEEEEEeccccccccccccceeEEEeeecCCCCCC----CCCCC--CC-
Q 015176 297 NLVSKGGELLKRTRKGALHWKQVSFNINS-NLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWP----PRESE--DD- 368 (412)
Q Consensus 297 ~~l~kg~eLlkrtrkG~lhwk~Vsvyin~-~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawp----gr~~~--~~- 368 (412)
+.|.+|+.|.|-++++ .-+.+.+.++. .++++-+=..+. ..+++-++-..|+-... .+... ..
T Consensus 4 ~~L~~G~~~~K~~~~~--~~~~~~f~ld~~~~~l~W~~~~~~-------~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~ 74 (115)
T cd01248 4 EALQRGSVFIKWDDTS--RERRRLFRLDEKGFFLYWKDEGKK-------EKKVLDISSIKEIRTGKQPKDLKLRAELNQG 74 (115)
T ss_pred HHHhCCCEEEEEcCCC--ceeeEEEEEcCCCcEEEEeCCCCc-------cccEEEehhhhhhhCCCCCcchHHhhhhhcC
Confidence 4678999999998833 33445666654 345555422221 22223222233432221 11100 00
Q ss_pred -CCceeEEEE--Eec--CeeEEEEeCCcchhhhHHHHHHHH
Q 015176 369 -SEQRAYFGI--KTA--DRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 369 -~~~r~YFgL--kTa--~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
..+.++|=| .+. -..+-|=|.|..+.+.|++||.+|
T Consensus 75 ~~~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~~gL~~L 115 (115)
T cd01248 75 NSLEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWVSGLRKL 115 (115)
T ss_pred CCccccEEEEEECCCCCeeEEEEEECCHHHHHHHHHHHhhC
Confidence 245566633 222 356999999999999999999874
No 19
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=78.03 E-value=21 Score=27.68 Aligned_cols=88 Identities=23% Similarity=0.333 Sum_probs=51.2
Q ss_pred cceeeeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEEecC
Q 015176 302 GGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIKTAD 381 (412)
Q Consensus 302 g~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLkTa~ 381 (412)
.|-|+|..+.. =.|+..=++++. +.+.+ -+++.-.+ ..-...+.+.-+... .+. +....|=|.|.+
T Consensus 2 ~G~L~k~~~~~-~~W~~r~~vl~~-~~L~~-~~~~~~~~--~~~~~~i~l~~~~~~--------~~~-~~~~~F~i~~~~ 67 (91)
T cd01246 2 EGWLLKWTNYL-KGWQKRWFVLDN-GLLSY-YKNKSSMR--GKPRGTILLSGAVIS--------EDD-SDDKCFTIDTGG 67 (91)
T ss_pred eEEEEEecccC-CCceeeEEEEEC-CEEEE-EecCccCC--CCceEEEEeceEEEE--------ECC-CCCcEEEEEcCC
Confidence 35677776544 468777777763 44444 23332111 112222333222110 011 124568888888
Q ss_pred -eeEEEEeCCcchhhhHHHHHHH
Q 015176 382 -RVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 382 -g~vEfec~s~~~~q~W~~gI~~ 403 (412)
..+.|.++|..+.+.|++.|+.
T Consensus 68 ~~~~~~~a~s~~e~~~Wi~al~~ 90 (91)
T cd01246 68 DKTLHLRANSEEERQRWVDALEL 90 (91)
T ss_pred CCEEEEECCCHHHHHHHHHHHHh
Confidence 7899999999999999999864
No 20
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=73.57 E-value=34 Score=28.89 Aligned_cols=32 Identities=6% Similarity=0.269 Sum_probs=28.8
Q ss_pred eeEEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 372 RAYFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 372 r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
...|-|.|..++..|.|++..+.+.|++.|+.
T Consensus 74 ~~~F~i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 74 KYPFQVVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred CccEEEEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 45699999999999999999999999999975
No 21
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=73.53 E-value=6.2 Score=34.07 Aligned_cols=32 Identities=19% Similarity=0.413 Sum_probs=29.5
Q ss_pred eeEEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 372 RAYFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 372 r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
+..|.|.|..++..|-++|..+.+.|.+.|+.
T Consensus 68 ~~~Fei~tp~rt~~l~A~se~e~e~WI~~i~~ 99 (101)
T cd01264 68 PKAFEIFTADKTYILKAKDEKNAEEWLQCLNI 99 (101)
T ss_pred CcEEEEEcCCceEEEEeCCHHHHHHHHHHHHh
Confidence 35799999999999999999999999999875
No 22
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=73.09 E-value=8.3 Score=41.01 Aligned_cols=81 Identities=19% Similarity=0.327 Sum_probs=54.9
Q ss_pred eeeccCCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEEE--ecCee
Q 015176 306 LKRTRKGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGIK--TADRV 383 (412)
Q Consensus 306 lkrtrkG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgLk--Ta~g~ 383 (412)
+--|..|.|+|+. .++=.|-|.|--+ |--..-+|-+|..+..+ +..-++||=. =....
T Consensus 24 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~ 83 (481)
T PLN02958 24 LTLTAEGKLRWTD-------SGQRCLTVEKEVL-GFVIEGSKIRVKTIVEK------------GGGICCRGSAGALARKD 83 (481)
T ss_pred EEeccCCEEEeec-------CCcceEEEeeeee-EEEEeCCEEEEEEEEec------------CCcccccCCCCCceeee
Confidence 4445889999992 4566777777666 44444555555555432 2344566432 23356
Q ss_pred EEEEeCCcchhhhHHHHHHHHHh
Q 015176 384 IEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 384 vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
+.|+|.+..+++.|++.|...|.
T Consensus 84 ~~~~~~~~~~~~~w~~~~~~~~~ 106 (481)
T PLN02958 84 FVFEPLSDESRRLWCQKLRDYLD 106 (481)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999998885
No 23
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=71.81 E-value=32 Score=27.77 Aligned_cols=33 Identities=15% Similarity=0.294 Sum_probs=28.5
Q ss_pred ceeEEEEEecC-eeEEEEeCCcchhhhHHHHHHH
Q 015176 371 QRAYFGIKTAD-RVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 371 ~r~YFgLkTa~-g~vEfec~s~~~~q~W~~gI~~ 403 (412)
....|-|.|.. +++.|-++|..+.+.|++.|..
T Consensus 62 k~~~F~I~~~~~~~~~f~a~s~~e~~~Wi~ai~~ 95 (96)
T cd01260 62 KKYAFKVCHPVYKSFYFAAETLDDLSQWVNHLIT 95 (96)
T ss_pred CceEEEECCCCCcEEEEEeCCHHHHHHHHHHHHh
Confidence 34569998888 9999999999999999998863
No 24
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=70.94 E-value=7.3 Score=33.32 Aligned_cols=33 Identities=15% Similarity=0.434 Sum_probs=29.4
Q ss_pred eeEEEEEecCeeEEEEeCCcchhhhHHHHHHHH
Q 015176 372 RAYFGIKTADRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 372 r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
..-|.|.|.+++.-|-|+|..+.+.|.+.|..|
T Consensus 69 ~~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~~ 101 (101)
T cd01257 69 RHLIALYTRDEYFAVAAENEAEQDSWYQALLEL 101 (101)
T ss_pred CeEEEEEeCCceEEEEeCCHHHHHHHHHHHhhC
Confidence 345999999999999999999999999998753
No 25
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=70.12 E-value=43 Score=28.72 Aligned_cols=27 Identities=15% Similarity=0.351 Sum_probs=23.0
Q ss_pred eeEEEEeCCcchhhhHHHHHHHHHhhh
Q 015176 382 RVIEFECRNKGDKQMWVEGIQHILNCC 408 (412)
Q Consensus 382 g~vEfec~s~~~~q~W~~gI~~lL~~~ 408 (412)
.++.|.|+|..+.+.|++.|+..+...
T Consensus 90 ~~~~~~A~s~~e~~~Wi~al~~~~~~~ 116 (125)
T cd01252 90 SVYRISAANDEEMDEWIKSIKASISPN 116 (125)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 367799999999999999999977543
No 26
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=69.99 E-value=27 Score=30.77 Aligned_cols=34 Identities=29% Similarity=0.566 Sum_probs=29.5
Q ss_pred ceeE-EEEEecC-eeEEEEeCCcchhhhHHHHHHHH
Q 015176 371 QRAY-FGIKTAD-RVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 371 ~r~Y-FgLkTa~-g~vEfec~s~~~~q~W~~gI~~l 404 (412)
.+.+ |.|+|.. +.+-|.|.|..+-+.|++.|+..
T Consensus 75 Kr~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~ 110 (117)
T cd01230 75 KKPHVFRLRTADWREFLFQTSSLKELQSWIERINVV 110 (117)
T ss_pred CCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 3344 9999998 68999999999999999999864
No 27
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=66.11 E-value=56 Score=28.27 Aligned_cols=34 Identities=21% Similarity=0.326 Sum_probs=30.1
Q ss_pred eeEEEEEecCeeEEEEeCCcchhhhHHHHHHHHH
Q 015176 372 RAYFGIKTADRVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 372 r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
..-|=|.|.+..+.+-|.|..+++.|.+.|+.-.
T Consensus 65 ~n~f~I~~~~kSf~v~A~s~~eK~eWl~~i~~ai 98 (104)
T cd01218 65 RNGWIIKTPTKSFAVYAATETEKREWMLHINKCV 98 (104)
T ss_pred cceEEEecCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 3459999999999999999999999999988744
No 28
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=65.72 E-value=9.5 Score=31.57 Aligned_cols=32 Identities=16% Similarity=0.423 Sum_probs=28.2
Q ss_pred eeEEEEEecC-eeEEEEeCCcchhhhHHHHHHH
Q 015176 372 RAYFGIKTAD-RVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 372 r~YFgLkTa~-g~vEfec~s~~~~q~W~~gI~~ 403 (412)
..-|.|.|.. ++..|.++|..+.+.|++.|++
T Consensus 58 ~~~F~i~~~~~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 58 ENRFDISVNENVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred CCEEEEEeCCCeEEEEEeCCHHHHHHHHHHHhh
Confidence 3569887777 9999999999999999999985
No 29
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=63.98 E-value=21 Score=30.47 Aligned_cols=34 Identities=18% Similarity=0.540 Sum_probs=27.9
Q ss_pred eeEEEEEecC---eeEEEEeCCcchhhhHHHHHHHHH
Q 015176 372 RAYFGIKTAD---RVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 372 r~YFgLkTa~---g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
.+-|-|...+ ..++|.++|..+++.|++.|+.+|
T Consensus 59 ~~~F~v~~~~~p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 59 PLCFRVIPFDDPKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred CcEEEEEecCCCceEEEEEecCHHHHHHHHHHHHHHh
Confidence 4778664332 589999999999999999999875
No 30
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=63.71 E-value=17 Score=31.38 Aligned_cols=91 Identities=15% Similarity=0.261 Sum_probs=45.8
Q ss_pred eeccCCceeeEEEEEEeCCCcEEEEEecc--ccccccccc---ccee---EEEeeecCCCCCCCCCCCCCCCceeEEEEE
Q 015176 307 KRTRKGALHWKQVSFNINSNLQVVAKLKS--KHMAGAFTK---KKKC---IVSAVICDIPRWPPRESEDDSEQRAYFGIK 378 (412)
Q Consensus 307 krtrkG~lhwk~Vsvyin~~~qVilKmks--khv~Gafsk---kkk~---vV~~V~~~~pawpgr~~~~~~~~r~YFgLk 378 (412)
|+++.|+=.||.+-+.+.. +++.=-|. .+..+.+.. -+.. -++++...+ +-+ ..+-......|=|+
T Consensus 17 kk~~~~~R~Wk~~y~vL~g--~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~-a~~---a~dY~Kr~~VFrL~ 90 (119)
T PF15410_consen 17 KKASRSKRSWKQVYAVLQG--GQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHAL-AEI---ASDYTKRKNVFRLR 90 (119)
T ss_dssp CC---S---EEEEEEEEET--TEEEEESSHHHHCCT-BS---SS--E-----EE-TT-E-EEE---ETTBTTCSSEEEEE
T ss_pred CCcCCCCCCccEEeEEEEC--CEEEEEccCcccccCCcccccccccCcceeEEEecceE-EEe---CcccccCCeEEEEE
Confidence 5666678899999999964 44443444 233233321 1111 112221110 000 01112344669999
Q ss_pred ecCe-eEEEEeCCcchhhhHHHHHHH
Q 015176 379 TADR-VIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 379 Ta~g-~vEfec~s~~~~q~W~~gI~~ 403 (412)
|++| ..-|.+.|..+-+.|++.|+.
T Consensus 91 ~~dg~e~Lfqa~~~~~m~~Wi~~IN~ 116 (119)
T PF15410_consen 91 TADGSEYLFQASDEEEMNEWIDAINY 116 (119)
T ss_dssp -TTS-EEEEE-SSHHHHHHHHHHHHH
T ss_pred eCCCCEEEEECCCHHHHHHHHHHHhh
Confidence 9985 899999999999999999985
No 31
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=61.49 E-value=85 Score=28.51 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=31.7
Q ss_pred ceeEEEEEecC--eeEEEEeCCcchhhhHHHHHHHHHhhhh
Q 015176 371 QRAYFGIKTAD--RVIEFECRNKGDKQMWVEGIQHILNCCA 409 (412)
Q Consensus 371 ~r~YFgLkTa~--g~vEfec~s~~~~q~W~~gI~~lL~~~~ 409 (412)
+.+-|.|.+.. -.+.|.|.+...++.|++.|..+|-.+.
T Consensus 79 d~~kFeiw~~~~~~~yilqA~t~e~K~~Wv~~I~~iL~~Q~ 119 (133)
T cd01227 79 DTKKFEIWYNAREEVYILQAPTPEIKAAWVNEIRKVLTSQL 119 (133)
T ss_pred CccEEEEEeCCCCcEEEEEcCCHHHHHHHHHHHHHHHHHHH
Confidence 46778886655 3688999999999999999999986543
No 32
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=58.90 E-value=89 Score=27.71 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=55.2
Q ss_pred cceeeeecc-CCceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeec--CCCCCCCCCCCCCCCceeE-EEE
Q 015176 302 GGELLKRTR-KGALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVIC--DIPRWPPRESEDDSEQRAY-FGI 377 (412)
Q Consensus 302 g~eLlkrtr-kG~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~--~~pawpgr~~~~~~~~r~Y-FgL 377 (412)
.|||.+.++ +|.-+=|.+..|- +|+|+ -|+.++-|..=.+|.-+.++.+. |+| .|++. +.+..-.+ |=|
T Consensus 5 ~Gel~~~s~~~g~~q~R~~FLFD---~~LI~-CKkd~~r~~~~~yKgri~l~~~~I~d~~--Dg~~~-~~~~~~knafkl 77 (109)
T cd01224 5 QGEATRQKQNKGWNSSRVLFLFD---HQMVL-CKKDLIRRDHLYYKGRIDLDRCEVVNIR--DGKMF-SSGHTIKNSLKI 77 (109)
T ss_pred eeeEEEEecccCCcccEEEEEec---ceEEE-EecccccCCcEEEEEEEEcccEEEEECC--CCccc-cCCceeEEEEEE
Confidence 578888886 4777766555553 35555 66666666555666666555432 211 12221 21222233 645
Q ss_pred EecC--eeEEEEeCCcchhhhHHHHHH
Q 015176 378 KTAD--RVIEFECRNKGDKQMWVEGIQ 402 (412)
Q Consensus 378 kTa~--g~vEfec~s~~~~q~W~~gI~ 402 (412)
.-.+ -.+.|-|++..+|+.|.+.+.
T Consensus 78 ~~~~~~~~~~f~~Kt~e~K~~Wm~a~~ 104 (109)
T cd01224 78 YSESTDEWYLFSFKSAERKHRWLSAFA 104 (109)
T ss_pred EEcCCCeEEEEEECCHHHHHHHHHHHH
Confidence 2222 348999999999999999875
No 33
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=54.70 E-value=1.1e+02 Score=25.97 Aligned_cols=30 Identities=10% Similarity=0.340 Sum_probs=27.3
Q ss_pred EEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 374 YFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 374 YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
-|-|-|..++.-|.|+|..+.+.|.+.|+.
T Consensus 68 ~fqivt~~r~~yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 68 IITIVCEDDTMQLQFEAPVEATDWLNALEK 97 (98)
T ss_pred eEEEEeCCCeEEEECCCHHHHHHHHHHHhc
Confidence 488888999999999999999999998864
No 34
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=54.24 E-value=17 Score=31.05 Aligned_cols=33 Identities=24% Similarity=0.598 Sum_probs=27.4
Q ss_pred ceeEEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 371 QRAYFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 371 ~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
...-|-+.|.++.+-|.|++..+...|.+.|+.
T Consensus 79 ~~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 79 HLKVFSIFTPTKTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp SSEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCcEEECCCcEEEEEECCHHHHHHHHHHHHh
Confidence 446688899999999999999999999999874
No 35
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=50.94 E-value=1.3e+02 Score=25.19 Aligned_cols=30 Identities=27% Similarity=0.513 Sum_probs=27.6
Q ss_pred EEEEecCeeEEEEeCCcchhhhHHHHHHHH
Q 015176 375 FGIKTADRVIEFECRNKGDKQMWVEGIQHI 404 (412)
Q Consensus 375 FgLkTa~g~vEfec~s~~~~q~W~~gI~~l 404 (412)
|-+.|..++.-|-++|..+.+.|+..|..+
T Consensus 78 f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 78 FDIETIVRDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred EEEEeCCccEEEEECCHHHHHHHHHHHHhh
Confidence 888999999999999999999999999653
No 36
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=50.62 E-value=29 Score=29.95 Aligned_cols=32 Identities=19% Similarity=0.265 Sum_probs=29.0
Q ss_pred ceeEEEEEecCeeEEEEeCCcchhhhHHHHHH
Q 015176 371 QRAYFGIKTADRVIEFECRNKGDKQMWVEGIQ 402 (412)
Q Consensus 371 ~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~ 402 (412)
+...|.|.|.+++.-|-|++..+.+.|.+.|+
T Consensus 70 ~~~~f~I~tp~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 70 QKFSICILTPDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred CccEEEEECCCceEEEEeCCHHHHHHHHHHHH
Confidence 34579999999999999999999999999876
No 37
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=43.56 E-value=34 Score=30.16 Aligned_cols=21 Identities=14% Similarity=0.455 Sum_probs=19.0
Q ss_pred eeEEEEeCCcchhhhHHHHHH
Q 015176 382 RVIEFECRNKGDKQMWVEGIQ 402 (412)
Q Consensus 382 g~vEfec~s~~~~q~W~~gI~ 402 (412)
+.+.|.|+|..+|+.|.+...
T Consensus 80 r~y~l~cdsEeqya~Wmaa~r 100 (106)
T cd01237 80 NEVWLRCDNEKQYAKWMAACR 100 (106)
T ss_pred eEEEEECCCHHHHHHHHHHHH
Confidence 689999999999999998753
No 38
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=43.34 E-value=2.3e+02 Score=24.94 Aligned_cols=36 Identities=28% Similarity=0.497 Sum_probs=28.7
Q ss_pred ceeEEEEEecC-----eeEEEEeCCcchhhhHHHHHHHHHh
Q 015176 371 QRAYFGIKTAD-----RVIEFECRNKGDKQMWVEGIQHILN 406 (412)
Q Consensus 371 ~r~YFgLkTa~-----g~vEfec~s~~~~q~W~~gI~~lL~ 406 (412)
+.+-|+|.+.. -.+-+.+.|...|+.|+..|..+|.
T Consensus 73 d~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 73 DPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred CCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 44668884333 3678999999999999999999985
No 39
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=42.58 E-value=51 Score=34.63 Aligned_cols=99 Identities=19% Similarity=0.367 Sum_probs=58.6
Q ss_pred cccceeeeeccCCceeeEEEEEEeC----CCcEEEEEeccc----ccccccc---ccceeEE------EeeecCCCCCCC
Q 015176 300 SKGGELLKRTRKGALHWKQVSFNIN----SNLQVVAKLKSK----HMAGAFT---KKKKCIV------SAVICDIPRWPP 362 (412)
Q Consensus 300 ~kg~eLlkrtrkG~lhwk~Vsvyin----~~~qVilKmksk----hv~Gafs---kkkk~vV------~~V~~~~pawpg 362 (412)
-..|.+.+ ..+++.||..-++|. ...++......+ .+.=|++ ..+.||- .|||.=.-.+.
T Consensus 374 ~~~g~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 450 (496)
T PTZ00283 374 LYEGIVKK--QSSDLSWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYT- 450 (496)
T ss_pred eeeeEEec--ccCCcccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhh-
Confidence 34566665 366677887777664 323333322222 2222222 2345663 55554322222
Q ss_pred CCCCCCCCceeE-EEEEecCe-eEEEEeCCcchhhhHHHHHHHHHhh
Q 015176 363 RESEDDSEQRAY-FGIKTADR-VIEFECRNKGDKQMWVEGIQHILNC 407 (412)
Q Consensus 363 r~~~~~~~~r~Y-FgLkTa~g-~vEfec~s~~~~q~W~~gI~~lL~~ 407 (412)
++++-| |.|.+..| .+-|.|++..+++.|.+.||+-|-+
T Consensus 451 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (496)
T PTZ00283 451 ------GSNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLGI 491 (496)
T ss_pred ------CCCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcCC
Confidence 233344 88877664 6999999999999999999987743
No 40
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=41.26 E-value=38 Score=30.46 Aligned_cols=50 Identities=16% Similarity=0.401 Sum_probs=33.9
Q ss_pred eeecCCCCCCCCCCCCCCCceeEE-EEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 352 AVICDIPRWPPRESEDDSEQRAYF-GIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 352 ~V~~~~pawpgr~~~~~~~~r~YF-gLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
|-|+..|.=|-.+++ ...+|.|| ++| ....|.|-|++..+.+.|++.+-+
T Consensus 58 Dy~~~~~~~~~~~~~-~~gg~~ff~avk-egd~~~fa~~de~~r~lwvqa~yr 108 (117)
T cd01234 58 DYMPESDPDPNSELS-LQGGRHFFNAVK-EGDELKFATDDENERHLWVQAMYR 108 (117)
T ss_pred eccCCCCCCcccccc-cccchhhhheec-cCcEEEEeccchHHHHHHHHHHHH
Confidence 446666555544432 22456666 776 334699999999999999998654
No 41
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=39.33 E-value=2.1e+02 Score=23.33 Aligned_cols=31 Identities=16% Similarity=0.459 Sum_probs=26.4
Q ss_pred eEEEEEecC-eeEEEEeCCcchhhhHHHHHHH
Q 015176 373 AYFGIKTAD-RVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 373 ~YFgLkTa~-g~vEfec~s~~~~q~W~~gI~~ 403 (412)
.-|-|++.. ..+-|.++|..+.+.|++.|+.
T Consensus 72 ~~F~l~~~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 72 HVFRLRLPDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred eEEEEEecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 349998777 5899999999999999999864
No 42
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=36.53 E-value=2.5e+02 Score=24.09 Aligned_cols=89 Identities=20% Similarity=0.364 Sum_probs=51.6
Q ss_pred ceeeeeccCCceeeEEEEEEeCC---CcEEE-EEecc-ccccccccccceeEEEeeecCCCCCCCCCCCCCCCceeEEEE
Q 015176 303 GELLKRTRKGALHWKQVSFNINS---NLQVV-AKLKS-KHMAGAFTKKKKCIVSAVICDIPRWPPRESEDDSEQRAYFGI 377 (412)
Q Consensus 303 ~eLlkrtrkG~lhwk~Vsvyin~---~~qVi-lKmks-khv~Gafskkkk~vV~~V~~~~pawpgr~~~~~~~~r~YFgL 377 (412)
|-|+|++..=.--||+=.+.+.. .++.- ++=++ +.--| +.--..+.|..|++.+ -+..-+|-|
T Consensus 3 G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~g-li~l~~~~V~~v~ds~-----------~~r~~cFel 70 (98)
T cd01245 3 GNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIG-LIDLSDAYLYPVHDSL-----------FGRPNCFQI 70 (98)
T ss_pred CccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccc-eeeccccEEEEccccc-----------cCCCeEEEE
Confidence 45788875325678887776631 12222 21111 11112 1112233555555542 124467988
Q ss_pred EecCe-eEEEEeCCcchhhhHHHHHHH
Q 015176 378 KTADR-VIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 378 kTa~g-~vEfec~s~~~~q~W~~gI~~ 403 (412)
.|..+ .+=|-|.+..+++.|.+.|+.
T Consensus 71 ~~~~~~~~y~~~a~~~er~~Wi~~l~~ 97 (98)
T cd01245 71 VERALPTVYYSCRSSEERDKWIESLQA 97 (98)
T ss_pred ecCCCCeEEEEeCCHHHHHHHHHHHhc
Confidence 88876 888999999889999999874
No 43
>PF15409 PH_8: Pleckstrin homology domain
Probab=35.23 E-value=60 Score=27.68 Aligned_cols=33 Identities=21% Similarity=0.487 Sum_probs=28.8
Q ss_pred ceeEEEEEecCeeEEEEeCCcchhhhHHHHHHH
Q 015176 371 QRAYFGIKTADRVIEFECRNKGDKQMWVEGIQH 403 (412)
Q Consensus 371 ~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~ 403 (412)
+.+-|-|.|..-+--+++.|+.+.|.|++.++.
T Consensus 55 ~~~~I~idsg~~i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 55 KSRRIDIDSGDEIWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred CCCEEEEEcCCeEEEEEcCCHHHHHHHHHHHHh
Confidence 446788888888999999999999999999875
No 44
>KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms]
Probab=31.39 E-value=89 Score=35.02 Aligned_cols=105 Identities=25% Similarity=0.391 Sum_probs=61.4
Q ss_pred ccchhhhcccccccceeeeeccC-CceeeEEEEEEeCCCcEEEEEeccccccccccccceeEEEeeecCCCCCCCCCCCC
Q 015176 289 ESNISAALNLVSKGGELLKRTRK-GALHWKQVSFNINSNLQVVAKLKSKHMAGAFTKKKKCIVSAVICDIPRWPPRESED 367 (412)
Q Consensus 289 e~~~~~~~~~l~kg~eLlkrtrk-G~lhwk~Vsvyin~~~qVilKmkskhv~Gafskkkk~vV~~V~~~~pawpgr~~~~ 367 (412)
|.++.....-|=|+|-|+|.+-+ |.-.=|-+ |-.|. --.-.|+|. .++| +|+. |..+++ |++-...+
T Consensus 262 e~dIV~PsreLiKEG~l~Kis~k~~~~qeRyl-fLFNd-~~lyc~~r~-~~~~--~k~~---~r~~~s----~~~~~v~~ 329 (623)
T KOG4424|consen 262 EEDIVSPSRELIKEGQLQKISAKNGTTQERYL-FLFND-ILLYCKPRK-RLPG--SKYE---VRARCS----ISHMQVQE 329 (623)
T ss_pred CccccCcHHHHhhccceeeeeccCCCcceeEE-EEehh-HHHhhhhhh-hccc--ceec---cceeec----cCcchhcc
Confidence 44444333446689999999988 65554444 44442 223334444 3433 3333 333332 33433322
Q ss_pred C-CC-ceeEEEEEecCeeEEEEeCCcchhhhHHHHHHHHH
Q 015176 368 D-SE-QRAYFGIKTADRVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 368 ~-~~-~r~YFgLkTa~g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
+ .+ -..-|=|+--++-|||--.+..+++.|++.|+.-+
T Consensus 330 ~~~~~~~~tF~~~G~~r~vel~a~t~~ek~eWv~~I~~~I 369 (623)
T KOG4424|consen 330 DDNEELPHTFILTGKKRGVELQARTEQEKKEWVQAIQDAI 369 (623)
T ss_pred cccccCCceEEEecccceEEeecCchhhHHHHHHHHHHHH
Confidence 2 22 23346565456789999999999999999998865
No 45
>KOG4598 consensus Putative ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones]
Probab=30.65 E-value=11 Score=42.97 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=27.0
Q ss_pred ccchhhccccccCCCCCCCCCCCCCCCCCcchhhhhcccccccHHHHH
Q 015176 7 KSSSQKLENIDENGPAKWLPLSCAPPETPTESMEFLARSWSLSAMELS 54 (412)
Q Consensus 7 ~~~~~~le~i~E~~~~~~~p~~~~pPetP~epMEFLSRSWS~SA~evs 54 (412)
.|+++.+.+|.|+.. |+.|.+.+-.++|-|.+|-.|+-
T Consensus 1035 ~~~~~~~qE~~deV~----------~~k~~~sL~i~vRRW~Ps~~e~~ 1072 (1203)
T KOG4598|consen 1035 WCSHLYLQEITDEVM----------IGKPGESLPIMVRRWRPSTVEVN 1072 (1203)
T ss_pred hHHHHHHHHHHhhcc----------cCCCCccchhhheeccccceecC
Confidence 455566666655433 34567888899999999998875
No 46
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=28.33 E-value=1.7e+02 Score=30.41 Aligned_cols=96 Identities=21% Similarity=0.247 Sum_probs=57.9
Q ss_pred ccccceeeeeccCCceeeEEEEEEeCCCcEEEEEecccc-cccccccccee--EEEeeecCCCCCCCCCCCCCCCceeEE
Q 015176 299 VSKGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSKH-MAGAFTKKKKC--IVSAVICDIPRWPPRESEDDSEQRAYF 375 (412)
Q Consensus 299 l~kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmkskh-v~Gafskkkk~--vV~~V~~~~pawpgr~~~~~~~~r~YF 375 (412)
+...|-|++...+. +||.=-+++. .+++.+..+... ..|. ..+--+ -|.+||..-+. . .....-+|
T Consensus 377 v~~~G~l~k~~~~~--~wk~ry~~l~-~~~l~~~~~~~~~~~~~-~~~~~~l~~~~~v~pv~~~------~-~~~~~~~~ 445 (478)
T PTZ00267 377 VTHGGYLYKYSSDM--RWKKRYFYIG-NGQLRISLSENPENDGV-APKSVNLETVNDVFPVPEV------Y-SQKHPNQL 445 (478)
T ss_pred cccceEEeccCCCc--chhhheEEec-CCceEEEeccccccCCC-CCccccHHHhcccccccHH------h-cCCCCceE
Confidence 35678888887655 5766566665 477777765221 1222 111112 25666543110 0 11123458
Q ss_pred EEEecC-eeEEEEeCCcchhhhHHHHHHHHH
Q 015176 376 GIKTAD-RVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 376 gLkTa~-g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
-++|.. ..+=|.+++..+.+.|+..|+.-|
T Consensus 446 ~i~~~~~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 446 VLWFNNGQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred EEEecCCcEEEEecCChHHHHHHHHHHHHHh
Confidence 777755 468888999999999999999866
No 47
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=24.14 E-value=4e+02 Score=24.14 Aligned_cols=99 Identities=15% Similarity=0.235 Sum_probs=49.5
Q ss_pred ccccceeeeeccCCce---ee----EEEEEEeCCCcEEEEEecccccccccccc-----ceeEEEeeecCCCCCCCCCCC
Q 015176 299 VSKGGELLKRTRKGAL---HW----KQVSFNINSNLQVVAKLKSKHMAGAFTKK-----KKCIVSAVICDIPRWPPRESE 366 (412)
Q Consensus 299 l~kg~eLlkrtrkG~l---hw----k~Vsvyin~~~qVilKmkskhv~Gafskk-----kk~vV~~V~~~~pawpgr~~~ 366 (412)
|-|-|||..-...|.. +. +.|-+|+=. -++|=-|+| .++.|+-+ ...-|.++-...+.=||....
T Consensus 3 LvK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFn--DlLl~tkkK-~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~ 79 (125)
T cd01221 3 LVKRGELTQLEERGSSNILRKKLKARTIYLFLFN--DLLLITKKK-LGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNL 79 (125)
T ss_pred eEEEeeEEEEeccCCcchhcccccCCcEEEEEec--ceEEEEEec-CCCeEEEEeeccccceEEeecccccccccccccc
Confidence 4567888876655532 32 244444422 233333444 25566542 222233332222222332111
Q ss_pred CCCCceeEEEE--Eec-Ce---eEEEEeCCcchhhhHHHHHH
Q 015176 367 DDSEQRAYFGI--KTA-DR---VIEFECRNKGDKQMWVEGIQ 402 (412)
Q Consensus 367 ~~~~~r~YFgL--kTa-~g---~vEfec~s~~~~q~W~~gI~ 402 (412)
. ...--|=| -.+ +| .++|.|+++.++++|.+.+.
T Consensus 80 ~--~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al~ 119 (125)
T cd01221 80 V--GRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSALA 119 (125)
T ss_pred c--CCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhcC
Confidence 1 22333533 222 34 48888999999999999874
No 48
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=23.84 E-value=1.3e+02 Score=27.42 Aligned_cols=36 Identities=14% Similarity=0.307 Sum_probs=29.2
Q ss_pred CceeEEEEEecC-------eeEEEEeCCcchhhhHHHHHHHHH
Q 015176 370 EQRAYFGIKTAD-------RVIEFECRNKGDKQMWVEGIQHIL 405 (412)
Q Consensus 370 ~~r~YFgLkTa~-------g~vEfec~s~~~~q~W~~gI~~lL 405 (412)
|=.|-|.|.|.+ -.+-|..+|-.++++||..++.|=
T Consensus 77 DiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l~ 119 (122)
T cd01243 77 DIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSELH 119 (122)
T ss_pred cCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHHH
Confidence 344569998876 468899999999999999998864
No 49
>PF08772 NOB1_Zn_bind: Nin one binding (NOB1) Zn-ribbon like; InterPro: IPR014881 This entry corresponds to a zinc ribbon and is found on the RNA binding protein NOB1. ; PDB: 2CON_A.
Probab=21.06 E-value=47 Score=27.46 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=14.6
Q ss_pred cccceeeeeccCCceeeEEEEEEeCCCcEEEEEeccc
Q 015176 300 SKGGELLKRTRKGALHWKQVSFNINSNLQVVAKLKSK 336 (412)
Q Consensus 300 ~kg~eLlkrtrkG~lhwk~Vsvyin~~~qVilKmksk 336 (412)
.+.....-|-.||.=-++.|+|+++.+|++.+-++++
T Consensus 19 t~~~~k~FCp~CGn~TL~rvsvsv~~~G~~~~~~~~~ 55 (73)
T PF08772_consen 19 TKDMTKQFCPKCGNATLKRVSVSVDEDGKIKLHLKKN 55 (73)
T ss_dssp ES-SS--S-SSS--S--EEEE-B--SS---B------
T ss_pred cCCCCceeCcccCCCcceEEEEEECCCCCEEEEecCC
Confidence 4566677788999999999999999999999888877
No 50
>COG3602 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.04 E-value=45 Score=30.46 Aligned_cols=41 Identities=29% Similarity=0.358 Sum_probs=33.9
Q ss_pred HHHHhcCCCchhHHHHhhhhhcccCCChhHHHhHHHHhhhhhH
Q 015176 219 EIAEDMGADHDQILTVVNSAVNARTNGDIMTLTAGAATALRGA 261 (412)
Q Consensus 219 e~AE~~GA~rd~vasaV~sav~~~S~gDimTLTAaAATaLRGA 261 (412)
+.||++|-+-+-+.+.| .+||+|.=|-+-||||=+|+|-++
T Consensus 57 ~~AeaaGl~~~~~~~lI--TL~VhSsLeaVGltAA~ataLa~a 97 (134)
T COG3602 57 DAAEAAGLSYSAVCRLI--TLNVHSSLEAVGLTAAFATALAEA 97 (134)
T ss_pred hhHHhcCCCccceeeeE--EeehhhhhhhhhHHHHHHHHHHHc
Confidence 45799999888877776 478899999999999999988654
Done!