Query 015184
Match_columns 411
No_of_seqs 255 out of 1743
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 08:09:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015184.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015184hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 3.7E-54 1.3E-58 416.9 24.6 289 61-411 47-348 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 4.3E-55 1.5E-59 424.2 17.0 286 61-411 52-361 (383)
3 3vla_A EDGP; extracellular, in 100.0 1.1E-53 3.7E-58 418.7 24.6 324 60-411 9-377 (413)
4 1tzs_A Cathepsin E; hydrolase, 100.0 1.6E-51 5.4E-56 396.6 24.5 288 60-411 13-320 (351)
5 1am5_A Pepsin, acid proteinase 100.0 1.1E-51 3.7E-56 393.6 20.4 284 62-411 4-302 (324)
6 2apr_A Rhizopuspepsin; hydrola 100.0 2.6E-51 8.8E-56 391.0 22.7 277 70-411 11-302 (325)
7 1dpj_A Proteinase A; proteinas 100.0 2.7E-51 9.4E-56 391.7 22.5 285 61-411 4-307 (329)
8 1qdm_A Prophytepsin; aspartic 100.0 4.2E-51 1.5E-55 406.6 22.8 294 60-411 42-456 (478)
9 3cms_A Chymosin B; hydrolase, 100.0 8.6E-52 2.9E-56 394.1 17.1 278 70-411 10-301 (323)
10 4aa9_A Chymosin; hydrolase, as 100.0 2.1E-51 7.3E-56 391.1 18.7 282 62-411 3-298 (320)
11 1htr_B Gastricsin; aspartyl pr 100.0 1.9E-50 6.3E-55 385.9 22.6 282 71-411 9-307 (329)
12 3k1w_A Renin; protease, altern 100.0 4.9E-51 1.7E-55 392.1 17.3 291 60-411 8-318 (341)
13 1mpp_A Pepsin; hydrolase(acid 100.0 1.7E-50 6E-55 391.0 20.8 286 61-411 9-333 (361)
14 3c9x_A Trichoderma reesei aspa 100.0 1.1E-50 3.8E-55 387.2 17.9 279 71-411 12-308 (329)
15 3aup_A SBG7S, BG, basic 7S glo 100.0 1.2E-49 4E-54 390.4 24.9 321 60-411 10-364 (403)
16 1j71_A Candidapepsin, aspartic 100.0 3.8E-50 1.3E-54 384.5 20.2 272 72-411 10-302 (334)
17 1oew_A Endothiapepsin; hydrola 100.0 2.3E-50 8E-55 385.0 17.8 276 72-411 13-307 (329)
18 1miq_A Plasmepsin; aspartic pr 100.0 5.8E-50 2E-54 388.2 20.1 277 62-411 54-352 (375)
19 2qzx_A Candidapepsin-5; aspart 100.0 1.1E-49 3.8E-54 382.6 20.4 275 72-411 10-309 (342)
20 3fv3_A SAPP1P-secreted asparti 100.0 2E-49 6.8E-54 380.5 20.9 270 72-411 10-307 (339)
21 3pvk_A Candidapepsin-2; hydrol 100.0 1.2E-49 4E-54 382.6 18.9 276 72-411 10-309 (342)
22 3qvc_A Histo-aspartic protease 100.0 2.4E-49 8.1E-54 390.6 21.3 278 61-411 128-427 (451)
23 2bju_A Plasmepsin II; aspartic 100.0 4E-50 1.4E-54 395.5 15.5 278 62-411 130-428 (453)
24 3lpj_A Beta-secretase 1; alzhe 100.0 9.9E-49 3.4E-53 389.5 22.8 291 71-411 71-398 (455)
25 1yg9_A Aspartic protease BLA G 100.0 2.6E-49 8.8E-54 377.8 17.1 282 61-411 8-307 (330)
26 1t6e_X Xylanase inhibitor; two 100.0 9.9E-48 3.4E-52 374.0 24.4 305 70-411 10-351 (381)
27 2ewy_A Beta-secretase 2; BACE2 100.0 1.3E-47 4.5E-52 373.9 22.9 290 71-411 10-333 (383)
28 1ibq_A Aspergillopepsin; aspar 100.0 5.2E-48 1.8E-52 368.2 19.2 273 72-411 12-303 (325)
29 2qp8_A Beta-secretase 1; BACE1 100.0 3.2E-47 1.1E-51 372.4 24.0 288 72-411 19-345 (395)
30 3vf3_A Beta-secretase 1; struc 100.0 6.5E-47 2.2E-51 371.2 25.9 289 72-411 26-352 (402)
31 1izd_A Aspartic proteinase; su 100.0 8.6E-48 2.9E-52 366.2 17.1 273 72-411 13-301 (323)
32 1bxo_A Protein (penicillopepsi 100.0 9.1E-48 3.1E-52 366.2 14.3 271 72-411 13-301 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 4.8E-46 1.6E-50 357.0 19.1 265 73-411 11-311 (340)
34 1b5f_A Protein (cardosin A); h 100.0 2.6E-44 8.9E-49 327.4 14.7 217 70-333 9-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 5.6E-31 1.9E-35 240.0 15.5 198 193-411 4-219 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 8.5E-24 2.9E-28 163.1 6.3 84 70-183 9-96 (97)
37 1b5f_B Protein (cardosin A); h 98.6 1.5E-08 5.1E-13 76.0 3.6 54 355-411 8-65 (87)
38 2hs1_A HIV-1 protease; ultra-h 85.9 0.89 3.1E-05 33.9 4.3 28 77-106 10-37 (99)
39 1fmb_A EIAV protease; hydrolas 85.4 0.83 2.8E-05 34.5 3.9 27 76-104 9-35 (104)
40 2i1a_A DNA damage-inducible pr 83.6 0.99 3.4E-05 36.3 4.0 32 71-104 22-53 (148)
41 3ec0_A Protease; HIV-2, inhibi 83.0 1.4 4.9E-05 32.8 4.3 28 77-106 10-37 (99)
42 3liy_A Protease; hydrolase, hy 79.5 1.6 5.4E-05 33.3 3.4 31 77-107 12-45 (116)
43 2i1a_A DNA damage-inducible pr 78.5 2.3 7.9E-05 34.1 4.5 29 286-327 31-59 (148)
44 3s8i_A Protein DDI1 homolog 1; 78.4 1.7 5.6E-05 35.2 3.6 34 278-327 24-57 (148)
45 2hah_A Protease, retropepsin; 76.3 2.4 8.1E-05 32.6 3.7 26 77-105 16-41 (116)
46 3s8i_A Protein DDI1 homolog 1; 76.3 2.2 7.5E-05 34.4 3.7 32 72-105 21-52 (148)
47 3sqf_A Protease; folded monome 71.2 4 0.00014 31.2 3.8 29 77-107 11-39 (114)
48 3slz_A GAG-Pro-POL polyprotein 65.5 7.2 0.00025 30.7 4.3 32 73-106 20-51 (132)
49 3ka2_A [L-Ala51;Gly51']HIV-1 p 57.5 10 0.00034 32.2 4.1 28 76-105 9-36 (203)
50 2rsp_A RSV protease; hydrolase 57.0 10 0.00035 29.4 3.8 23 82-106 27-49 (124)
51 1lya_A Cathepsin D; lysosomal 56.3 10 0.00036 27.8 3.6 15 308-322 30-44 (97)
52 1fmb_A EIAV protease; hydrolas 41.5 16 0.00056 27.3 2.6 33 279-324 6-38 (104)
53 3slz_A GAG-Pro-POL polyprotein 40.3 26 0.00088 27.4 3.7 27 283-322 24-50 (132)
54 2hs1_A HIV-1 protease; ultra-h 40.0 19 0.00065 26.7 2.7 30 279-321 6-35 (99)
55 3ec0_A Protease; HIV-2, inhibi 36.1 22 0.00077 26.2 2.6 29 279-320 6-34 (99)
56 2hah_A Protease, retropepsin; 35.4 26 0.00088 26.8 2.9 30 278-321 11-40 (116)
57 3ka2_A [L-Ala51;Gly51']HIV-1 p 34.6 42 0.0015 28.3 4.4 28 76-105 113-140 (203)
58 1j71_A Candidapepsin, aspartic 32.7 32 0.0011 31.3 3.8 37 270-322 5-43 (334)
59 3fv3_A SAPP1P-secreted asparti 32.6 32 0.0011 31.3 3.8 37 270-322 5-43 (339)
60 1wkr_A Polyporopepsin; hydrola 31.4 37 0.0013 31.0 3.9 15 308-322 29-43 (340)
61 2qzx_A Candidapepsin-5; aspart 30.4 37 0.0013 31.0 3.8 15 308-322 29-43 (342)
62 1bxo_A Protein (penicillopepsi 29.7 43 0.0015 30.4 4.0 40 268-324 7-46 (323)
63 1izd_A Aspartic proteinase; su 28.5 46 0.0016 30.1 4.0 40 268-324 7-46 (323)
64 3pvk_A Candidapepsin-2; hydrol 26.7 47 0.0016 30.2 3.8 15 308-322 29-43 (342)
65 1yg9_A Aspartic protease BLA G 26.6 46 0.0016 30.3 3.6 30 277-322 17-46 (330)
66 1ibq_A Aspergillopepsin; aspar 26.2 47 0.0016 30.1 3.6 40 268-324 6-45 (325)
67 1b5f_A Protein (cardosin A); h 24.5 56 0.0019 28.1 3.6 15 308-322 30-44 (239)
68 1htr_B Gastricsin; aspartyl pr 23.2 73 0.0025 28.8 4.3 15 308-322 29-43 (329)
69 3sqf_A Protease; folded monome 22.6 73 0.0025 24.1 3.4 26 283-321 11-36 (114)
70 3c9x_A Trichoderma reesei aspa 22.1 71 0.0024 28.9 4.0 34 275-324 13-48 (329)
71 1oew_A Endothiapepsin; hydrola 21.5 75 0.0026 28.8 4.0 33 275-323 13-47 (329)
72 2apr_A Rhizopuspepsin; hydrola 20.5 67 0.0023 29.0 3.5 15 308-322 32-46 (325)
73 1lya_B Cathepsin D; lysosomal 20.4 83 0.0028 26.8 3.9 32 74-105 99-137 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=3.7e-54 Score=416.89 Aligned_cols=289 Identities=25% Similarity=0.431 Sum_probs=237.0
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcc
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEF 140 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~ 140 (411)
..||. ++.+.+|+++|+||||||+|+|+|||||+++||+|..|..| .|..++.|||++|+|++..+
T Consensus 47 ~~~l~----n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~-----~C~~~~~y~~~~SsT~~~~~----- 112 (370)
T 3psg_A 47 DEPLE----NYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL-----ACSDHNQFNPDDSSTFEATS----- 112 (370)
T ss_dssp CCTTG----GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG-----GGTTSCCBCGGGCTTCEEEE-----
T ss_pred eecce----eccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc-----ccCCCCCCCCccCcCcEECC-----
Confidence 45665 67899999999999999999999999999999999998642 23335799999999999855
Q ss_pred cCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCcccccee
Q 015184 141 CHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGI 220 (411)
Q Consensus 141 C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGI 220 (411)
+.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++...+.++ ....+|||
T Consensus 113 -----------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~~--~~~~~dGI 164 (370)
T 3psg_A 113 -----------------QELSITYGTGSM-TGILGYDTVQVGGIS--------DTNQIFGLSETEPGSFL--YYAPFDGI 164 (370)
T ss_dssp -----------------EEEEEESSSCEE-EEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSCSEE
T ss_pred -----------------cEEEEEeCCceE-EEEEEEEEEeeCCcc--------cCCeEEEEEEeeccccc--ccCCccce
Confidence 789999999995 999999999998754 67899999998765332 45678999
Q ss_pred eecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEE
Q 015184 221 IGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQV 288 (411)
Q Consensus 221 lGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v 288 (411)
||||++.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|+ +++.|+|+. .+.+|.|.+++|+|
T Consensus 165 lGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~-~~~~w~v~l~~i~v 243 (370)
T 3psg_A 165 LGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVS-VEGYWQITLDSITM 243 (370)
T ss_dssp EECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECS-EETTEEEEECEEES
T ss_pred eccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccc-ccceeEEEEeEEEE
Confidence 99999764 6899999999996 9999999985 4589999999996 789999996 56899999999999
Q ss_pred CCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEc
Q 015184 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFE 368 (411)
Q Consensus 289 ~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 368 (411)
+++.+. ....+.+||||||+++++|.+++++|.+++++.... ...+.++| +....+|+|+|+|
T Consensus 244 ~g~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~----~g~~~v~C-----~~~~~lP~i~f~~- 306 (370)
T 3psg_A 244 DGETIA-------CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASENS----DGEMVISC-----SSIDSLPDIVFTI- 306 (370)
T ss_dssp SSSEEE-------CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEECT----TCCEECCG-----GGGGGCCCEEEEE-
T ss_pred CCEEEe-------cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcccC----CCcEEEEC-----CCcccCCcEEEEE-
Confidence 998764 233667999999999999999999999999765321 11223466 5556799999999
Q ss_pred CCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 369 NSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 369 gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|++|+||+++|+++ .++.|+ +|++.+..+..+ +.|||||+
T Consensus 307 ~g~~~~l~~~~yi~~-~~~~C~~~~~~~~~~~~~~-~~~ILG~~ 348 (370)
T 3psg_A 307 DGVQYPLSPSAYILQ-DDDSCTSGFEGMDVPTSSG-ELWILGDV 348 (370)
T ss_dssp TTEEEEECHHHHEEE-CSSCEEESEEEECCCTTSC-CEEEECHH
T ss_pred CCEEEEECHHHhccc-CCCEEEEEEEeCCCCCCCC-CcEEeChH
Confidence 899999999999999 555797 788765433323 47999984
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.3e-55 Score=424.19 Aligned_cols=286 Identities=22% Similarity=0.376 Sum_probs=236.8
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC----CCCCcCCCCCcCccCCCCCCCCCceecC
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTC 136 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~~~~Sst~~~~~c 136 (411)
..||. ++.+.+|+++|+||||||+|+|+|||||+++||+|..|. .|.. ++.|||++|+||+..+
T Consensus 52 ~~~l~----n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-------~~~y~~~~SsT~~~~~- 119 (383)
T 2x0b_A 52 SVILT----NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-------HKLFDASDSSSYKHNG- 119 (383)
T ss_dssp EEEEE----EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-------SCCBCGGGCTTCEEEE-
T ss_pred eEeee----ecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-------CCCCCCCCCCcEEECC-
Confidence 46676 567899999999999999999999999999999999885 4654 3789999999999854
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccc
Q 015184 137 DQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEA 216 (411)
Q Consensus 137 ~~~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~ 216 (411)
|.|.+.|++|++ .|++++|+|+|++.. ++ +.|||++...+..+ ....
T Consensus 120 ---------------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~g~~f--~~~~ 166 (383)
T 2x0b_A 120 ---------------------TELTLRYSTGTV-SGFLSQDIITVGGIT--------VT-QMFGEVTEMPALPF--MLAE 166 (383)
T ss_dssp ---------------------EEEEEECSSCEE-EEEEEEEEEEETTEE--------EE-EEEEEEEECCHHHH--TTCS
T ss_pred ---------------------cEEEEEcCCccE-EEEEEeeEEEEcCce--------EE-EEEEEEEecCCccc--ccCC
Confidence 789999999985 999999999998753 66 99999998754321 3457
Q ss_pred cceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-C----CCceeeeCCcCC----CCceeecCcCCCCceE
Q 015184 217 LDGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-N----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYS 280 (411)
Q Consensus 217 ~dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~----~~G~l~fGg~d~----~~~~~~p~~~~~~~w~ 280 (411)
+|||||||++.. +++++|++||+|+ ++||+||.+. . .+|.|+|||+|+ +++.|+|+. .+.+|.
T Consensus 167 ~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~-~~~~w~ 245 (383)
T 2x0b_A 167 FDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQ 245 (383)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBS-STTSCE
T ss_pred CceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcC-CCceEE
Confidence 899999999764 5899999999996 9999999886 2 279999999997 578999996 568999
Q ss_pred EEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccC
Q 015184 281 INMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGF 360 (411)
Q Consensus 281 v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~ 360 (411)
|.+++|+|+++.+. +...+.+||||||+++++|.+++++|.+++++.. ....+.++| +....+
T Consensus 246 v~l~~i~v~~~~~~-------~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-----~~g~~~v~C-----~~~~~~ 308 (383)
T 2x0b_A 246 IQMKGVSVGSSTLL-------CEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-----RLFDYVVKC-----NEGPTL 308 (383)
T ss_dssp EEECEEEESSCCCB-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-----CSSCEEEEG-----GGTTTC
T ss_pred EEEeEEEeCCceEE-------cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-----cCCcEEEec-----cccccC
Confidence 99999999987642 2346789999999999999999999999997653 112233567 444579
Q ss_pred ceEEEEEcCCcEEEECCCeeeEEcC---CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 361 PNVTFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 361 P~i~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+|+|+| +|++|+||+++|+++.. +..|+ +|++.+..+.. .+.|||||+
T Consensus 309 P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~-~~~~ILGd~ 361 (383)
T 2x0b_A 309 PDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPT-GPTWALGAT 361 (383)
T ss_dssp CCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTT-CSCEEECHH
T ss_pred ceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCC-CCcEEEChH
Confidence 9999999 89999999999999862 46898 89887654332 368999984
No 3
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.1e-53 Score=418.68 Aligned_cols=324 Identities=21% Similarity=0.366 Sum_probs=255.7
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 60 ~~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
+.+|+.+ +..+++|+++|.||||||+|.|+|||||+++||+|..| .+|+||+.+.|.++
T Consensus 9 ~~~pv~~---d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c------------------~~Sst~~~v~C~s~ 67 (413)
T 3vla_A 9 LVVPVKK---DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN------------------YVSSTYRPVRCRTS 67 (413)
T ss_dssp EEEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS------------------CCCTTCEECBTTSH
T ss_pred EEEEeee---cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC------------------CCCCCcCccCCCcc
Confidence 3456654 34678999999999999999999999999999998764 36999999999999
Q ss_pred ccCCCCCCCC--------CCCCCCCCCCceeee-CCCCeeeeeEEEEEEEEecccCCcc-ccccCCceEEeeeecccCCC
Q 015184 140 FCHGVYGGPL--------TDCTANTSCPYLEIY-GDGSSTTGYFVQDVVQYDKVSGDLQ-TTSTNGSLIFGCGARQSGNL 209 (411)
Q Consensus 140 ~C~~~~~~~~--------~~c~~~~~~~~~~~Y-~~g~~~~G~~~~D~v~i~~~~~~~~-~~~~~~~~~Fg~~~~~~~~~ 209 (411)
.|........ +.|. ++.|.|.+.| ++|+.+.|++++|+|+|++..+... ....++++.|||+..+....
T Consensus 68 ~C~~~~~~~~~~c~s~~~~~c~-~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g 146 (413)
T 3vla_A 68 QCSLSGSIACGDCFNGPRPGCN-NNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN 146 (413)
T ss_dssp HHHHTTCCEEECCSSCCBTTBC-SSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT
T ss_pred cccccccCCCcccccCCCCCCC-CCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC
Confidence 9987654322 3454 3579999999 5877779999999999986543321 12346789999999863211
Q ss_pred CCCCccccceeeecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCCceeeeCCcCC---------CC-ceeecCcCCC--
Q 015184 210 DSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ---------PE-VNKTPLVPNQ-- 276 (411)
Q Consensus 210 ~~~~~~~~dGIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~fGg~d~---------~~-~~~~p~~~~~-- 276 (411)
....+|||||||++..|++.||.+++.++++||+||.+. ..+|.|+||++|. ++ ++|+|++.++
T Consensus 147 ---~~~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~ 223 (413)
T 3vla_A 147 ---LASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVS 223 (413)
T ss_dssp ---SCTTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSC
T ss_pred ---cccccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcc
Confidence 224689999999999999999999999989999999984 4679999999874 35 9999998653
Q ss_pred -----------CceEEEEEEEEECCEEeecCCcccccc--CCCcEEEcccCceeecChHHHHHHHHHHHHhCC--CCcc-
Q 015184 277 -----------PHYSINMTAVQVGLDFLNLPTDVFGVG--DNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP--DLKV- 340 (411)
Q Consensus 277 -----------~~w~v~l~~i~v~g~~~~~~~~~~~~~--~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~--~~~~- 340 (411)
.+|.|+|++|+||++.+.++...|... ..+++||||||++++||+++|++|.+++.+... ....
T Consensus 224 ~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~ 303 (413)
T 3vla_A 224 TSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRV 303 (413)
T ss_dssp CSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred ccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcC
Confidence 699999999999999998877666433 357899999999999999999999999987642 1111
Q ss_pred cccCCCCceeeecCCc----cccCceEEEEEcC-CcEEEECCCeeeEEc-CCEEEEEEEeCCCCCCCCCCeeeecCC
Q 015184 341 HTVHDEYTCFQYSESV----DEGFPNVTFHFEN-SVSLKVYPHEYLFPF-EDLWCIGWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 341 ~~~~~~~~C~~~~~~~----~~~~P~i~f~f~g-g~~~~l~~~~yi~~~-~~~~C~~~~~~~~~~~~~~~~~ILGdv 411 (411)
........||..++.. ...+|+|+|+|.| +++|+||+++|+++. ++..|++|+..+.. ..+.|||||+
T Consensus 304 ~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~---~~~~~IlGd~ 377 (413)
T 3vla_A 304 ASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSN---LRTSIVIGGH 377 (413)
T ss_dssp CCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESS---CSSSEEECHH
T ss_pred CCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCC---cccceeEehh
Confidence 1122346999876532 2469999999954 389999999999987 66789988876531 1258999984
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.6e-51 Score=396.57 Aligned_cols=288 Identities=25% Similarity=0.387 Sum_probs=236.0
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCC
Q 015184 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCD 137 (411)
Q Consensus 60 ~~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~ 137 (411)
...||. ++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..
T Consensus 13 ~~~~l~----n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~--- 78 (351)
T 1tzs_A 13 AKEPLI----NYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKT-------HSRFQPSQSSTYSQP--- 78 (351)
T ss_dssp -CCTTG----GGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGTT-------SCCBCGGGCTTCBCC---
T ss_pred cceece----ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccCC-------CCcCCcccCcceEEC---
Confidence 356776 567889999999999999999999999999999999986 5654 378999999999874
Q ss_pred CcccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCcccc
Q 015184 138 QEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEAL 217 (411)
Q Consensus 138 ~~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~ 217 (411)
.|.|.+.|++|++ .|.+++|+|+|++.. ++++.|||++...+... ....+
T Consensus 79 -------------------~~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~ 128 (351)
T 1tzs_A 79 -------------------GQSFSIQYGTGSL-SGIIGADQVSVEGLT--------VVGQQFGESVTEPGQTF--VDAEF 128 (351)
T ss_dssp -------------------SCEEEEESSSCEE-EEEEEEEEEEETTEE--------EEEEEEEEECSCCCGGG--GGCSC
T ss_pred -------------------CCEEEEEeCCCCe-EEEEEEeEEEECCeE--------ECCeEEEEEEecccccc--ccCCC
Confidence 4799999999985 999999999998753 66899999998654322 34568
Q ss_pred ceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCCC---CCceeeeCCcCC----CCceeecCcCCCCceEEEE
Q 015184 218 DGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGIN---GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINM 283 (411)
Q Consensus 218 dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~~---~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l 283 (411)
+||||||++.. +++++|++||+|+ ++||+||.+.. .+|.|+||++|+ +++.|+|+. ...+|.|.+
T Consensus 129 ~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l 207 (351)
T 1tzs_A 129 DGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVT-KQAYWQIAL 207 (351)
T ss_dssp SEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECS-EETTEEEEE
T ss_pred ceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecC-CCceEEEEe
Confidence 99999999764 5899999999996 99999998852 279999999996 679999996 568999999
Q ss_pred EEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceE
Q 015184 284 TAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNV 363 (411)
Q Consensus 284 ~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 363 (411)
++|+|+++.+. ......+||||||+++++|.+++++|.+++++.... ..+.++| .....+|+|
T Consensus 208 ~~i~v~~~~~~-------~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----g~~~~~C-----~~~~~~P~i 270 (351)
T 1tzs_A 208 DNIQVGGTVMF-------CSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD-----GEYAVEC-----ANLNVMPDV 270 (351)
T ss_dssp EEEEETTEEEE-------CTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS-----SSEEECG-----GGGGGSCCE
T ss_pred CEEEECCceEE-------cCCCceEEeccCCcceeCCHHHHHHHHHHhCCcccC-----CeEEEeC-----CCCccCCcE
Confidence 99999998753 223567999999999999999999999999765431 2233567 444568999
Q ss_pred EEEEcCCcEEEECCCeeeEEcC---CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 364 TFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 364 ~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|+| +|++|+||+++|+++.. +..|+ +|++.+..+. ..+.|||||+
T Consensus 271 ~f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~-~~~~~iLG~~ 320 (351)
T 1tzs_A 271 TFTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPP-AGPLWILGDV 320 (351)
T ss_dssp EEEE-TTEEEEECTTTSEECC-----CCEEESEEECCCCTT-TCSCEEECHH
T ss_pred EEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCC-CCCeEEEChH
Confidence 9999 89999999999999862 46898 7887654322 2368999974
No 5
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.1e-51 Score=393.63 Aligned_cols=284 Identities=23% Similarity=0.392 Sum_probs=235.4
Q ss_pred cCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 62 LPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 62 ~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
.||. ++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 4 ~~l~----n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~---- 68 (324)
T 1am5_A 4 EQMK----NEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-------HNKFKPRQSSTYVETG---- 68 (324)
T ss_dssp EEEE----EETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-------SCCBCGGGCTTCEEEE----
T ss_pred eeee----cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-------CCcCCCccCCCeEeCC----
Confidence 4565 567889999999999999999999999999999999886 4654 3689999999999854
Q ss_pred ccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccce
Q 015184 140 FCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDG 219 (411)
Q Consensus 140 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dG 219 (411)
|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++...+.+. .....+|
T Consensus 69 ------------------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~G 119 (324)
T 1am5_A 69 ------------------KTVDLTYGTGGM-RGILGQDTVSVGGGS--------DPNQELGESQTEPGPFQ--AAAPFDG 119 (324)
T ss_dssp ------------------EEEEEECSSCEE-EEEEEEEEEESSSSC--------EEEEEEEEEEECCSTTT--TTCSSSE
T ss_pred ------------------cEEEEEECCCCe-EEEEEECceeECCcE--------EcccEEEEEEecccccc--cCCCCce
Confidence 789999999987 999999999998743 66899999998765432 3457899
Q ss_pred eeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEE
Q 015184 220 IIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (411)
Q Consensus 220 IlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~ 287 (411)
|||||++.. +++++|++||+|+ ++||+||.+. ...|.|+||++|+ +++.|+|+. ...+|.|.+++|+
T Consensus 120 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 198 (324)
T 1am5_A 120 ILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVT-AEKYWQVALDGIT 198 (324)
T ss_dssp EEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEE-EETTEEEEECEEE
T ss_pred EEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecC-CCcEEEEEEeEEE
Confidence 999999754 5899999999995 9999999885 3489999999996 679999996 5689999999999
Q ss_pred ECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEE
Q 015184 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHF 367 (411)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 367 (411)
|+++.+.. .+ ..+||||||+++++|++++++|.+++++. .. ...+.++| .....+|+|+|+|
T Consensus 199 v~~~~~~~-------~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~~----~g~~~~~C-----~~~~~~P~i~f~f 260 (324)
T 1am5_A 199 VNGQTAAC-------EG-CQAIVDTGTSKIVAPVSALANIMKDIGAS-EN----QGEMMGNC-----ASVQSLPDITFTI 260 (324)
T ss_dssp ETTEECCC-------CC-EEEEECTTCSSEEECTTTHHHHHHHHTCE-EC----CCCEECCT-----TSSSSSCCEEEEE
T ss_pred ECCceeec-------cC-ceEEEecCCccEECCHHHHHHHHHHhCCc-cc----CCcEEEeC-----CCcccCCcEEEEE
Confidence 99987521 12 67999999999999999999999999765 21 12233567 4445799999999
Q ss_pred cCCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 368 ENSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 368 ~gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|++|+||+++|+++. +..|+ +|++.+.... ..+.|||||+
T Consensus 261 -~g~~~~i~~~~y~~~~-~~~C~~~~~~~~~~~~-~~~~~ilG~~ 302 (324)
T 1am5_A 261 -NGVKQPLPPSAYIEGD-QAFCTSGLGSSGVPSN-TSELWIFGDV 302 (324)
T ss_dssp -TTEEEEECHHHHEEES-SSCEEECEEECCSCCS-SSCEEEECHH
T ss_pred -CCEEEEECHHHhcccC-CCeEEEEEEECccCCC-CCCcEEEChH
Confidence 8999999999999986 66898 8887654322 2368999974
No 6
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.6e-51 Score=391.00 Aligned_cols=277 Identities=25% Similarity=0.404 Sum_probs=228.7
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCC
Q 015184 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (411)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~ 149 (411)
+..+..|+++|+||||+|++.|+|||||+++||+|..|..| . ..++.|||++|+|++...
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~-----~~~~~y~~~~SsT~~~~~-------------- 70 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G-----SGQTKYDPNQSSTYQADG-------------- 70 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C-----TTSCCBCGGGCTTCEEEE--------------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h-----cCCCCCCcccCCCeeeCC--------------
Confidence 35678999999999999999999999999999999999888 2 235799999999999843
Q ss_pred CCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC-
Q 015184 150 TDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS- 228 (411)
Q Consensus 150 ~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~- 228 (411)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.| .....+||||||+...
T Consensus 71 --------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~f---~~~~~~GilGLg~~~~s 131 (325)
T 2apr_A 71 --------RTWSISYGDGSSASGILAKDNVNLGGLL--------IKGQTIELAKREAASF---ASGPNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHH---HTSSCSEEEECSCGGGC
T ss_pred --------CEEEEEECCCCCEEEEEEEEEEEECCEE--------ECcEEEEEEeccCccc---ccCCCceEEEeCCcccc
Confidence 7999999999977999999999998753 6689999999876544 2334899999998753
Q ss_pred ------cHHHHhhhcCCCC-CceEEeecCC--CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeec
Q 015184 229 ------SMISQLASSGGVR-KMFAHCLDGI--NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (411)
Q Consensus 229 ------s~~~~l~~~g~i~-~~Fs~~l~~~--~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (411)
+++++|++||+|+ ++||+||.+. ...|.|+||++|+ +++.|+|+..+..+|.|.+++|+|+++ +.
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~-~~- 209 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTS-TV- 209 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTE-EE-
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCE-ec-
Confidence 5899999999995 9999999653 5689999999996 679999997667899999999999983 21
Q ss_pred CCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEE
Q 015184 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKV 375 (411)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l 375 (411)
.....+||||||++++||+++|+++.+++.+..... ..+.++|+ . ..+|+|+|+| +|.+++|
T Consensus 210 -------~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~~~~~C~-----~-~~~p~i~f~f-~g~~~~i 271 (325)
T 2apr_A 210 -------ASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GTYTISCD-----T-SAFKPLVFSI-NGASFQV 271 (325)
T ss_dssp -------ECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SCEEECSC-----G-GGCCCEEEEE-TTEEEEE
T ss_pred -------CCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----CeEEEECC-----C-CCCCcEEEEE-CCEEEEE
Confidence 224579999999999999999999999997765432 22335673 2 3489999999 6679999
Q ss_pred CCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 376 YPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 376 ~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+++|+++..+..|+ +|+..+ .+.|||||+
T Consensus 272 p~~~~~~~~~~~~C~~~i~~~~------~~~~iLG~~ 302 (325)
T 2apr_A 272 SPDSLVFEEFQGQCIAGFGYGN------WGFAIIGDT 302 (325)
T ss_dssp CGGGGEEEEETTEEEESEEEES------SSSEEECHH
T ss_pred CHHHEEEcCCCCeEEEEEEcCC------CCCEEECHH
Confidence 999999875466898 555543 357999974
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=2.7e-51 Score=391.69 Aligned_cols=285 Identities=24% Similarity=0.442 Sum_probs=233.8
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCC--CCCcCCCCCcCccCCCCCCCCCceecCCC
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKE--CPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~--C~~~~~~~~~~~~y~~~~Sst~~~~~c~~ 138 (411)
.+||. ++.+..|+++|+||||+|++.|+|||||+++||+|..|.. |..+ +.|||++|+|++..+
T Consensus 4 ~~~l~----~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~~-------~~y~~~~SsT~~~~~--- 69 (329)
T 1dpj_A 4 DVPLT----NYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFLH-------SKYDHEASSSYKANG--- 69 (329)
T ss_dssp EEECE----EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHTS-------CCBCGGGCTTCEEEE---
T ss_pred ceeee----ecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCCc-------CcCCcccCcCeEECC---
Confidence 34665 5667899999999999999999999999999999999975 6543 689999999999844
Q ss_pred cccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccC-CCCCCCcccc
Q 015184 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-NLDSTNEEAL 217 (411)
Q Consensus 139 ~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~-~~~~~~~~~~ 217 (411)
|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .| .....
T Consensus 70 -------------------~~~~i~Yg~Gs-~~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~f---~~~~~ 118 (329)
T 1dpj_A 70 -------------------TEFAIQYGTGS-LEGYISQDTLSIGDLT--------IPKQDFAEATSEPGLTF---AFGKF 118 (329)
T ss_dssp -------------------EEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCHHHH---TTCSC
T ss_pred -------------------cEEEEEECCce-EEEEEEEEEEEECCeE--------ECCeEEEEEEecCcccc---ccCCc
Confidence 79999999995 5999999999998753 66899999998654 22 23468
Q ss_pred ceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCCC----CCceeeeCCcCC----CCceeecCcCCCCceEEE
Q 015184 218 DGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGIN----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSIN 282 (411)
Q Consensus 218 dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~~----~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~ 282 (411)
+||||||+... +++++|++||+|+ ++||+||.+.. .+|.|+||++|+ +++.|+|+. .+.+|.|.
T Consensus 119 ~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~ 197 (329)
T 1dpj_A 119 DGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVR-RKAYWEVK 197 (329)
T ss_dssp SEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECS-SBTTBEEE
T ss_pred ceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcC-CCceEEEE
Confidence 99999999764 4789999999996 99999998742 379999999996 568999996 56899999
Q ss_pred EEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCce
Q 015184 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPN 362 (411)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ 362 (411)
+++|+|+++.+.. .+..+||||||++++||++++++|.+++++... . ..||..+|.....+|+
T Consensus 198 l~~i~v~~~~~~~--------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~----~-----~g~~~~~C~~~~~~P~ 260 (329)
T 1dpj_A 198 FEGIGLGDEYAEL--------ESHGAAIDTGTSLITLPSGLAEMINAEIGAKKG----W-----TGQYTLDCNTRDNLPD 260 (329)
T ss_dssp EEEEEETTEEEEC--------SSCEEEECTTCSCEEECHHHHHHHHHHHTCEEC----T-----TSSEEECGGGGGGCCC
T ss_pred eeeEEECCeEecC--------CCccEEeeCCCCcEECCHHHHHHHHHHhCCccC----C-----CCeEEEECCCCCcCCc
Confidence 9999999987742 256799999999999999999999999965421 1 1344444566667999
Q ss_pred EEEEEcCCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 363 VTFHFENSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 363 i~f~f~gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+|+| +|++|+||+++|+++.+ ..|+ +|++.+.+... .+.|||||+
T Consensus 261 i~f~f-~g~~~~i~~~~y~~~~~-~~C~~~~~~~~~~~~~-~~~~iLG~~ 307 (329)
T 1dpj_A 261 LIFNF-NGYNFTIGPYDYTLEVS-GSCISAITPMDFPEPV-GPLAIVGDA 307 (329)
T ss_dssp EEEEE-TTEEEEECTTTSEEEET-TEEEECEEECCCCTTT-CSEEEECHH
T ss_pred EEEEE-CCEEEEECHHHhEecCC-CEEEEEEEecccCCCC-CCcEEEChH
Confidence 99999 89999999999999864 5898 78876543222 368999974
No 8
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.2e-51 Score=406.57 Aligned_cols=294 Identities=25% Similarity=0.384 Sum_probs=234.5
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC---CCCCcCCCCCcCccCCCCCCCCCceecC
Q 015184 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTC 136 (411)
Q Consensus 60 ~~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~~~~Sst~~~~~c 136 (411)
...||. ++.+..|+++|+||||||+|.|+|||||+++||+|..|. .|.. ++.|||++|+||+..
T Consensus 42 ~~~~l~----n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~-- 108 (478)
T 1qdm_A 42 DIVALK----NYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYL-------HSRYKAGASSTYKKN-- 108 (478)
T ss_dssp CSGGGC----CGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGGG-------SCCBCGGGCTTCBCC--
T ss_pred ceEEeE----eccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCccccC-------CCCCCcccCCCeeeC--
Confidence 456776 557889999999999999999999999999999999885 4554 478999999999873
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccc
Q 015184 137 DQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEA 216 (411)
Q Consensus 137 ~~~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~ 216 (411)
++.|.+.|++|+ +.|.+++|+|+|++.. ++++.||+++...+..+ ....
T Consensus 109 --------------------~~~~~i~Yg~Gs-~~G~~~~Dtv~ig~~~--------v~~~~Fg~a~~~~~~~f--~~~~ 157 (478)
T 1qdm_A 109 --------------------GKPAAIQYGTGS-IAGYFSEDSVTVGDLV--------VKDQEFIEATKEPGITF--LVAK 157 (478)
T ss_dssp --------------------CCEEEEEETTEE-EEEEEEEEEEEETTEE--------EEEEEEEEEEECCBSHH--HHCS
T ss_pred --------------------CcEEEEEcCCCC-eEEEEEEEEEEECCeE--------ECCEEEEEEEecCCccc--cccc
Confidence 478999999998 4999999999998753 66899999987654321 2346
Q ss_pred cceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC---CCCceeeeCCcCCC----CceeecCcCCCCceEEE
Q 015184 217 LDGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI---NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSIN 282 (411)
Q Consensus 217 ~dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~---~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~ 282 (411)
+|||||||++.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|+. ++.|+|+. ..++|.|.
T Consensus 158 ~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~-~~~~w~v~ 236 (478)
T 1qdm_A 158 FDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVT-QKGYWQFD 236 (478)
T ss_dssp SSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEE-EETTEEEE
T ss_pred ccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEecc-CCCeEEEE
Confidence 799999999765 4789999999996 9999999874 34799999999974 58899996 56899999
Q ss_pred EEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCC----------------------CC--
Q 015184 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP----------------------DL-- 338 (411)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~----------------------~~-- 338 (411)
+++|.|+++.+.+. .....+||||||+++++|.+++++|.+++++... ..
T Consensus 237 l~~i~v~g~~~~~~------~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p 310 (478)
T 1qdm_A 237 MGDVLVGGKSTGFC------AGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQP 310 (478)
T ss_dssp ECCEEETTEECSTT------TTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCH
T ss_pred EeEEEECCEEEeec------CCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccCh
Confidence 99999999886542 2356799999999999999999999998865310 00
Q ss_pred ----------------------------------------------------------------------------cccc
Q 015184 339 ----------------------------------------------------------------------------KVHT 342 (411)
Q Consensus 339 ----------------------------------------------------------------------------~~~~ 342 (411)
....
T Consensus 311 ~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~ 390 (478)
T 1qdm_A 311 KKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPM 390 (478)
T ss_dssp HHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSS
T ss_pred hhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCC
Confidence 0001
Q ss_pred cCCCCceeeecCCccccCceEEEEEcCCcEEEECCCeeeEEcC---CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 343 VHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 343 ~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+.+.++| +....+|+|+|+| +|++|+|+|++|+++.. ...|+ +|+..+.++.. .+.|||||+
T Consensus 391 g~~~v~C-----~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~-~~~~ILGd~ 456 (478)
T 1qdm_A 391 GESAVDC-----GSLGSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPR-GPLWILGDV 456 (478)
T ss_dssp SCCEECG-----GGGTTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTS-CSEEEECHH
T ss_pred CeEEeec-----ccccccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCC-CCcEEECHH
Confidence 1122344 5556799999999 89999999999999873 35898 68876654333 368999984
No 9
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8.6e-52 Score=394.06 Aligned_cols=278 Identities=22% Similarity=0.363 Sum_probs=229.3
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCC--CCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCC
Q 015184 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC--KECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (411)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C--~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~ 147 (411)
++.+..|+++|+||||+|++.|+|||||+++||+|..| ..|.. ++.|||++|+|++..+
T Consensus 10 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------ 70 (323)
T 3cms_A 10 NYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-------HQRFDPRKSSTFQNLG------------ 70 (323)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE------------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-------CCCCCCccCCCeEECC------------
Confidence 56788999999999999999999999999999999988 45654 3789999999999855
Q ss_pred CCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC
Q 015184 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (411)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~ 227 (411)
|.|.+.|++|++ .|.+++|+|+|++.. ++++.|||++...+... .....+||||||++.
T Consensus 71 ----------~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~ 129 (323)
T 3cms_A 71 ----------KPLSIHYGTGSM-QGILGYDTVTVSNIV--------DIQQTVGLSTQEPGDFF--TYAEFDGILGMAYPS 129 (323)
T ss_dssp ----------EEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HHSSCSEEEECSCGG
T ss_pred ----------cEEEEEeCCCCe-EEEEEEEEEEECCeE--------EeccEEEEEEecccccc--cccCCceEEecCcch
Confidence 789999999984 999999999998753 66899999998654211 234679999999875
Q ss_pred C------cHHHHhhhcCCCC-CceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecC
Q 015184 228 S------SMISQLASSGGVR-KMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (411)
Q Consensus 228 ~------s~~~~l~~~g~i~-~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (411)
. +++++|++|++|+ ++||+||.+....|.|+||++|+ +++.|+|+. ...+|.|.+++|+|+++.+..+
T Consensus 130 ~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 130 LASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVT-VQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp GSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECS-SBTTBEEEEEEEEETTEEEEST
T ss_pred hhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECc-cCCeEEEEEeeEEECCEEeecC
Confidence 3 6899999999995 99999999864459999999997 468999996 5689999999999999887532
Q ss_pred CccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEEC
Q 015184 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (411)
Q Consensus 297 ~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 376 (411)
....+||||||+++++|++++++|.+++++.... ...+.++| .....+|+|+|+| +|++++||
T Consensus 209 -------~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~----~g~~~~~C-----~~~~~~P~i~f~f-~g~~~~i~ 271 (323)
T 3cms_A 209 -------GGCQAILDTGTSKLVGPSSDILNIQQAIGATQNQ----YGEFDIDC-----DNLSYMPTVVFEI-NGKMYPLT 271 (323)
T ss_dssp -------TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEET----TTEEEECT-----TCTTTSCCEEEEE-TTEEEEEC
T ss_pred -------CCcEEEEecCCccEeCCHHHHHHHHHHhCCeecC----CCcEEEEC-----CCCccCceEEEEE-CCEEEEEC
Confidence 3567999999999999999999999999654221 11122456 4455799999999 89999999
Q ss_pred CCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 377 PHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 377 ~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+++|+++ .+..|+ +|++.+ ..+.|||||+
T Consensus 272 ~~~y~~~-~~~~C~~~i~~~~-----~~~~~iLG~~ 301 (323)
T 3cms_A 272 PSAYTSQ-DQGFCTSGFQSEN-----HSQKWILGDV 301 (323)
T ss_dssp HHHHEEE-ETTEEEESEEEC--------CCEEECHH
T ss_pred HHHhccC-CCCEEEEEEEeCC-----CCCcEEECHH
Confidence 9999998 567898 687754 1358999974
No 10
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.1e-51 Score=391.14 Aligned_cols=282 Identities=24% Similarity=0.406 Sum_probs=230.9
Q ss_pred cCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 62 LPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 62 ~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
.||. ++.+..|+++|+||||||+++|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 3 ~~l~----n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~---- 67 (320)
T 4aa9_A 3 EPLT----SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKSNVCKN-------HHRFDPRKSSTFRNLG---- 67 (320)
T ss_dssp ---------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE----
T ss_pred ccce----eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCccccCC-------CCCCCCCCCcCeEcCC----
Confidence 3665 677899999999999999999999999999999999986 3543 4799999999999865
Q ss_pred ccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccce
Q 015184 140 FCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDG 219 (411)
Q Consensus 140 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dG 219 (411)
|.|.+.|++|++ .|.+++|+|+|++.. ++++.|||++...+... .....+|
T Consensus 68 ------------------~~~~i~Yg~gs~-~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~G 118 (320)
T 4aa9_A 68 ------------------KPLSIHYGTGSM-EGFLGYDTVTVSNIV--------DPNQTVGLSTEQPGEVF--TYSEFDG 118 (320)
T ss_dssp ------------------EEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEECCSHHH--HSCCCSE
T ss_pred ------------------cEEEEEECCcEE-EEEEEEEEEEECCEe--------ecCeEEEEEEEcccccc--cccCccc
Confidence 789999999985 999999999998854 67899999998765221 3356799
Q ss_pred eeecCCCC------CcHHHHhhhcCCCC-CceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEE
Q 015184 220 IIGFGKSN------SSMISQLASSGGVR-KMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQV 288 (411)
Q Consensus 220 IlGLg~~~------~s~~~~l~~~g~i~-~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v 288 (411)
|||||++. .+++++|++||+|+ ++||+||.+....|.|+||++|+ +++.|+|+. ++.+|.|.+++|+|
T Consensus 119 ilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~v 197 (320)
T 4aa9_A 119 ILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVT-LQQYWQFTVDSVTI 197 (320)
T ss_dssp EEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECS-SBTTBEEEECEEEE
T ss_pred EEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcc-cCCceEEEEeEEEE
Confidence 99999865 36999999999995 99999999855689999999997 568999996 67899999999999
Q ss_pred CCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEc
Q 015184 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFE 368 (411)
Q Consensus 289 ~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~ 368 (411)
+++.+..+ ....++|||||++++||++++++|.+++++.... ...+.++| +....+|+|+|+|
T Consensus 198 ~~~~~~~~-------~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~----~g~~~~~C-----~~~~~~p~i~f~f- 260 (320)
T 4aa9_A 198 NGVAVACV-------GGCQAILDTGTSVLFGPSSDILKIQMAIGATENR----YGEFDVNC-----GNLRSMPTVVFEI- 260 (320)
T ss_dssp TTEEEEST-------TCEEEEECTTCSSEEEEHHHHHHHHHHTTCEECT----TSCEEECG-----GGGGGCCCEEEEE-
T ss_pred CCEEeccC-------CCcEEEEECCCCcEECCHHHHHHHHHHhCCcccC----CCcEEEeC-----CCCCcCceEEEEE-
Confidence 99887532 3567999999999999999999999999655321 11222456 5556799999999
Q ss_pred CCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 369 NSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 369 gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|++|+||+++|+.+ .+..|+ +|+... ..+.||||++
T Consensus 261 ~g~~~~l~~~~y~~~-~~~~C~~~i~~~~-----~~~~~ilG~~ 298 (320)
T 4aa9_A 261 NGRDYPLSPSAYTSK-DQGFCTSGFQGDN-----NSELWILGDV 298 (320)
T ss_dssp TTEEEEECHHHHEEE-ETTEEEESEEEET-----TCCCEEECHH
T ss_pred CCEEEEECHHHhccC-CCCeEEEEEEcCC-----CCCcEEEChH
Confidence 899999999999987 556897 687633 1357999973
No 11
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.9e-50 Score=385.94 Aligned_cols=282 Identities=24% Similarity=0.444 Sum_probs=232.2
Q ss_pred CCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCC
Q 015184 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGP 148 (411)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~ 148 (411)
+.+..|+++|.||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 9 ~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~------------- 68 (329)
T 1htr_B 9 YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-------HSRFNPSESSTYSTNG------------- 68 (329)
T ss_dssp GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-------SCCBCGGGCTTCEEEE-------------
T ss_pred EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-------CCcCCCccCCCeEECC-------------
Confidence 45789999999999999999999999999999999986 3654 3689999999999855
Q ss_pred CCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC
Q 015184 149 LTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS 228 (411)
Q Consensus 149 ~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~ 228 (411)
|.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++...+.+. .....+||||||++..
T Consensus 69 ---------~~~~i~Yg~gs~-~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~ 128 (329)
T 1htr_B 69 ---------QTFSLQYGSGSL-TGFFGYDTLTVQSIQ--------VPNQEFGLSENEPGTNF--VYAQFDGIMGLAYPAL 128 (329)
T ss_dssp ---------EEEEEEETTEEE-EEEEEEEEEEETTEE--------EEEEEEEEESSCSSGGG--GGCSCCEEEECCCCSC
T ss_pred ---------cEEEEEeCCCCe-EEEEEeeeEEEcceE--------ECceEEEEEEEcccccc--ccCCCceEEecCCCcc
Confidence 789999999987 999999999998753 66899999998755322 3456899999999864
Q ss_pred ------cHHHHhhhcCCCC-CceEEeecCCCC--CceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeec
Q 015184 229 ------SMISQLASSGGVR-KMFAHCLDGING--GGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNL 295 (411)
Q Consensus 229 ------s~~~~l~~~g~i~-~~Fs~~l~~~~~--~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~ 295 (411)
+++++|++||+|+ ++||+||.+... +|.|+||++|+ +++.|+|+. .+.+|.|.+++|+|+++.+..
T Consensus 129 s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~ 207 (329)
T 1htr_B 129 SVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVT-QELYWQIGIEEFLIGGQASGW 207 (329)
T ss_dssp CCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBC-SSSSCEEEECEEEETTEECCT
T ss_pred cccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECC-CCceEEEEEeEEEECCceeee
Confidence 5899999999995 999999998522 79999999996 468999996 568999999999999987531
Q ss_pred CCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEE
Q 015184 296 PTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKV 375 (411)
Q Consensus 296 ~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l 375 (411)
......+||||||++++||++++++|.+++++.... ...+.++| .....+|+|+|+| +|++|+|
T Consensus 208 ------~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~----~g~~~~~C-----~~~~~~P~i~f~f-~g~~~~i 271 (329)
T 1htr_B 208 ------CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE----YGQFLVNC-----NSIQNLPSLTFII-NGVEFPL 271 (329)
T ss_dssp ------TTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT----TSCEEECG-----GGGGGSCCEEEEE-TTEEEEE
T ss_pred ------cCCCceEEEecCCccEECCHHHHHHHHHHhCCeecC----CCeEEEeC-----CCcccCCcEEEEE-CCEEEEE
Confidence 123567999999999999999999999999765421 11223567 4445699999999 8999999
Q ss_pred CCCeeeEEcCCEEEE-EEEeCCCCCCCCCC-eeeecCC
Q 015184 376 YPHEYLFPFEDLWCI-GWQNSGMQSRDRKN-MTLLGDF 411 (411)
Q Consensus 376 ~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~-~~ILGdv 411 (411)
|+++|+++.. +.|+ +|++.+..+..+ + .|||||+
T Consensus 272 ~~~~y~~~~~-g~C~~~~~~~~~~~~~~-~~~~iLG~~ 307 (329)
T 1htr_B 272 PPSSYILSNN-GYCTVGVEPTYLSSQNG-QPLWILGDV 307 (329)
T ss_dssp CHHHHEEECS-SCEEESEEEECCCCTTS-SCEEEECHH
T ss_pred CHHHhcccCC-CEEEEEEEECCCCCCCC-CceEEEChH
Confidence 9999999875 4898 788765432222 4 8999974
No 12
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.9e-51 Score=392.10 Aligned_cols=291 Identities=21% Similarity=0.347 Sum_probs=236.4
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 60 ~~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
...||. ++.+..|+++|+||||+|+++|+|||||+++||+|..|..|.. .|..++.|||++|+|++..+
T Consensus 8 ~~~~l~----n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~---~C~~~~~y~~~~SsT~~~~~---- 76 (341)
T 3k1w_A 8 SSVILT----NYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYT---ACVYHKLFDASDSSSYKHNG---- 76 (341)
T ss_dssp EEEEEE----EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCH---HHHTSCCBCGGGCTTCEEEE----
T ss_pred ccccce----EccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCC---cccCCCCCCCCcCcCeeECC----
Confidence 345665 5678999999999999999999999999999999999873211 12234799999999999844
Q ss_pred ccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccce
Q 015184 140 FCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDG 219 (411)
Q Consensus 140 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dG 219 (411)
|.|.+.|++|+ +.|.+++|+|+|++.. + ++.|||++...+... .....+|
T Consensus 77 ------------------~~~~i~Yg~gs-~~G~~~~D~v~ig~~~--------v-~~~fg~~~~~~~~~~--~~~~~~G 126 (341)
T 3k1w_A 77 ------------------TELTLRYSTGT-VSGFLSQDIITVGGIT--------V-TQMFGEVTEMPALPF--MLAEFDG 126 (341)
T ss_dssp ------------------EEEEEEETTEE-EEEEEEEEEEEETTEE--------E-EEEEEEEEECCHHHH--TTCSSSE
T ss_pred ------------------CEEEEEECCcE-EEEEEEEEEEEECCce--------e-eEEEEEEEEcccccc--ccCCcce
Confidence 78999999998 5999999999998753 5 899999998765311 3456899
Q ss_pred eeecCCCCC------cHHHHhhhcCCCC-CceEEeecCCC-----CCceeeeCCcCC----CCceeecCcCCCCceEEEE
Q 015184 220 IIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGIN-----GGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINM 283 (411)
Q Consensus 220 IlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~~-----~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l 283 (411)
|||||++.. +++++|++||+|+ ++||+||.+.. .+|.|+||++|+ +++.|+|+. ++.+|.|.+
T Consensus 127 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l 205 (341)
T 3k1w_A 127 VVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLI-KTGVWQIQM 205 (341)
T ss_dssp EEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECS-STTSCEEEE
T ss_pred EEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecC-CCCEEEEEE
Confidence 999999765 5899999999996 99999998852 379999999997 468999996 678999999
Q ss_pred EEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceE
Q 015184 284 TAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNV 363 (411)
Q Consensus 284 ~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 363 (411)
++|+|+++.+.. .....++|||||++++||++++++|++++++..... + +.++| +....+|+|
T Consensus 206 ~~i~v~~~~~~~-------~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~~~----g-~~~~C-----~~~~~~p~i 268 (341)
T 3k1w_A 206 KGVSVGSSTLLC-------EDGCLALVDTGASYISGSTSSIEKLMEALGAKKRLF----D-YVVKC-----NEGPTLPDI 268 (341)
T ss_dssp CCEEETTEEEEC-------TTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECSS----C-EEEEG-----GGGGGCCCE
T ss_pred eEEEECCEEeec-------CCCCEEEEECCCChhcCCHHHHHHHHHHcCCeecCC----C-eEEeC-----CCCCcCCcE
Confidence 999999987532 235679999999999999999999999997654211 1 23456 555679999
Q ss_pred EEEEcCCcEEEECCCeeeEEc---CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 364 TFHFENSVSLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 364 ~f~f~gg~~~~l~~~~yi~~~---~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|+| +|++|+||+++|+++. ++..|+ +|...+..+.. .+.||||++
T Consensus 269 ~f~f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~-~~~~iLG~~ 318 (341)
T 3k1w_A 269 SFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPT-GPTWALGAT 318 (341)
T ss_dssp EEEE-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTT-CSCEEECHH
T ss_pred EEEE-CCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCC-CCeEEEChH
Confidence 9999 8999999999999986 367998 78876543322 368999973
No 13
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.7e-50 Score=391.01 Aligned_cols=286 Identities=22% Similarity=0.334 Sum_probs=234.6
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC---CCCCcCCCCCcCccCCCCCCCCCceecCC
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCD 137 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~~~~Sst~~~~~c~ 137 (411)
..||. ++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|..+ +.|||++|+|++..+
T Consensus 9 ~~~l~----~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~-------~~y~~~~SsT~~~~~-- 75 (361)
T 1mpp_A 9 TPGLY----DFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGK-------RFFDPSSSSTFKETD-- 75 (361)
T ss_dssp EEEEE----ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSS-------CCBCGGGCTTCEEEE--
T ss_pred eEEee----cCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCC-------CcCCCccCCceEecC--
Confidence 35665 567889999999999999999999999999999999997 67653 789999999999865
Q ss_pred CcccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccC-----CCCCC
Q 015184 138 QEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG-----NLDST 212 (411)
Q Consensus 138 ~~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~-----~~~~~ 212 (411)
|.|.+.|++|+ +.|.+++|+|+|++.. ++++.|||++...+ .+.
T Consensus 76 --------------------~~~~i~Yg~Gs-~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~~~~~~-- 124 (361)
T 1mpp_A 76 --------------------YNLNITYGTGG-ANGIYFRDSITVGGAT--------VKQQTLAYVDNVSGPTAEQSPD-- 124 (361)
T ss_dssp --------------------EEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEESGGGSSCTT--
T ss_pred --------------------CeEEEEECCce-EEEEEEEEEEEECCEE--------EeceEEEEEEeccCcccccccc--
Confidence 78999999999 5999999999998743 67899999998765 222
Q ss_pred CccccceeeecCCCC------------CcHHHHhhhcCCCC-CceEEeecCCCCCceeeeCCcCC----CCceeecCcCC
Q 015184 213 NEEALDGIIGFGKSN------------SSMISQLASSGGVR-KMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPN 275 (411)
Q Consensus 213 ~~~~~dGIlGLg~~~------------~s~~~~l~~~g~i~-~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~ 275 (411)
.....+||||||++. .+++++|++||+|+ ++||+||.+....|.|+||++|+ +++.|+|+...
T Consensus 125 ~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~ 204 (361)
T 1mpp_A 125 SELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKS 204 (361)
T ss_dssp CSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEE
T ss_pred ccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccC
Confidence 345789999999863 45888999999996 99999999854579999999996 67999999755
Q ss_pred CC---ceEEEEEEEEECCEEeecCCccccccCCCcEE-EcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceee
Q 015184 276 QP---HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTI-IDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQ 351 (411)
Q Consensus 276 ~~---~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~ai-iDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~ 351 (411)
.+ +|.|.+++|+|+++.+... ....+| |||||++++||++++++|.+++++.+. .....+.++|+
T Consensus 205 ~~~~~~~~v~l~~i~v~~~~~~~~-------~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~g~~~~~C~- 273 (361)
T 1mpp_A 205 RGGYFFWDAPVTGVKIDGSDAVSF-------DGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQQGYTVPCS- 273 (361)
T ss_dssp TTEEEEEEEEEEEEEETTEEEEEE-------EEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EETTEEEEEHH-
T ss_pred CCceeEEEEEEeEEEECCeeeccC-------CCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCCCcEEEECC-
Confidence 44 8999999999999876421 245699 999999999999999999999976532 11222335774
Q ss_pred ecCCccccC-ceEEEEEc-C-----CcEEEECCCeeeEEc--CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 352 YSESVDEGF-PNVTFHFE-N-----SVSLKVYPHEYLFPF--EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 352 ~~~~~~~~~-P~i~f~f~-g-----g~~~~l~~~~yi~~~--~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
....+ |+|+|+|. + |++|+||+++|+++. ++..|+ +|++.. .+.||||++
T Consensus 274 ----~~~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~~~C~~~i~~~~------~~~~iLG~~ 333 (361)
T 1mpp_A 274 ----KYQDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKSGETCMFIVLPDG------GNQFIVGNL 333 (361)
T ss_dssp ----HHTTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSSSCEEEESEEEES------SSCCEEEHH
T ss_pred ----CcccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCCCCeeEEEEEeCC------CCCEEEChH
Confidence 33457 99999993 4 799999999999987 346897 888752 358999974
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.1e-50 Score=387.23 Aligned_cols=279 Identities=25% Similarity=0.364 Sum_probs=225.2
Q ss_pred CCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCC
Q 015184 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (411)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (411)
..+..|+++|+||||+|+++|+|||||+++||+|..|..|..+ .++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~-----~~~~y~~~~SsT~~~~~--------------- 71 (329)
T 3c9x_A 12 SADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT-----GHAIYTPSKSSTSKKVS--------------- 71 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT-----TSCCBCGGGCTTCEECT---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC-----CCCcCCcccCcCceEcC---------------
Confidence 4578899999999999999999999999999999999876432 24799999999999854
Q ss_pred CCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC--
Q 015184 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (411)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~-- 228 (411)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||+...
T Consensus 72 ------~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~ 135 (329)
T 3c9x_A 72 ------GASWSISYGDGSSSSGDVYTDKVTIGGFS--------VNTQGVESATRVSTEFV--QDTVISGLVGLAFDSGNQ 135 (329)
T ss_dssp ------TCBEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCC
T ss_pred ------CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceeEEeCcccccc
Confidence 37899999999977999999999998753 66899999998755432 2246799999998643
Q ss_pred -------cHHHHhhhcCCC-CCceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecC
Q 015184 229 -------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (411)
Q Consensus 229 -------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (411)
+++++|+++ | +++||+||.+ ...|.|+||++|+ +++.|+|+..+..+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~-- 210 (329)
T 3c9x_A 136 VRPHPQKTWFSNAASS--LAEPLFTADLRH-GQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLN-- 210 (329)
T ss_dssp CBSSCCCCHHHHHHTT--SSSSEEEEECCS-SSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCC--
T ss_pred cCCCCCCCHHHHHHHh--cCCCEEEEEecC-CCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEecc--
Confidence 589999986 6 5999999987 4689999999996 678999997667899999999999987652
Q ss_pred CccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEEC
Q 015184 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (411)
Q Consensus 297 ~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 376 (411)
.....+||||||++++||++++++|.+++.+.... .....+.++|+ ..+|+|+|+| +|++++||
T Consensus 211 ------~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~--~~~~~~~~~C~-------~~~P~i~f~f-~g~~~~ip 274 (329)
T 3c9x_A 211 ------RNSIDGIADTGTTLLLLDDNVVDAYYANVQSAQYD--NQQEGVVFDCD-------EDLPSFSFGV-GSSTITIP 274 (329)
T ss_dssp ------SCCEEEEECTTCCSEEECHHHHHHHHTTCTTCEEE--TTTTEEEEETT-------CCCCCEEEEE-TTEEEEEC
T ss_pred ------CCCceEEEECCCCcEeCCHHHHHHHHHhCCCcEEc--CCCCEEEEECC-------CCCCcEEEEE-CCEEEEEC
Confidence 22567999999999999999999999887332110 01112224673 4689999999 89999999
Q ss_pred CCeeeEEc-C--CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 377 PHEYLFPF-E--DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 377 ~~~yi~~~-~--~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+++|++.. + ...|+ +|+..+ ..+.|||||+
T Consensus 275 ~~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~ 308 (329)
T 3c9x_A 275 GDLLNLTPLEEGSSTCFGGLQSSS-----GIGINIFGDV 308 (329)
T ss_dssp GGGGEEEESSTTCSEEEESEEECT-----TTTSEEECHH
T ss_pred HHHeeeeccCCCCCeEEEEEEcCC-----CCCcEEEChH
Confidence 99999875 2 37898 576543 2368999974
No 15
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.2e-49 Score=390.36 Aligned_cols=321 Identities=22% Similarity=0.358 Sum_probs=240.0
Q ss_pred cCcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 60 VDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 60 ~~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
+..||.+ +..+++|+++|.||||+|++.|+|||||+++||+|..| .+|+|++.+.|.++
T Consensus 10 ~~~pl~~---~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 10 VVLPVQN---DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQ------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEEE---CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSC------------------CCCSSCBCCCTTBH
T ss_pred EEEeeec---CCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCC------------------CCCCCCCccCCCCc
Confidence 3456653 34678999999999999999999999999999998753 36899999999999
Q ss_pred ccCCCCCC--------CCCCCCCCCCCCceeeeC-CCCeeeeeEEEEEEEEecccCCc---cccccCCceEEeeeecccC
Q 015184 140 FCHGVYGG--------PLTDCTANTSCPYLEIYG-DGSSTTGYFVQDVVQYDKVSGDL---QTTSTNGSLIFGCGARQSG 207 (411)
Q Consensus 140 ~C~~~~~~--------~~~~c~~~~~~~~~~~Y~-~g~~~~G~~~~D~v~i~~~~~~~---~~~~~~~~~~Fg~~~~~~~ 207 (411)
.|...... ..+.|. ++.|.|.+.|+ +|+.+.|.+++|+|+|++..+.. .....++++.|||+.....
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~-~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCH-KNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBC-SSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCC-CCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 99776533 123454 35789999998 78778999999999999854321 0013467899999998753
Q ss_pred C-CCCCCccccceeeecCCCCCcHHHHhhhcCCCCCceEEeecCC-CCCceeeeCCcCC-------C-----CceeecCc
Q 015184 208 N-LDSTNEEALDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGI-NGGGIFAIGHVVQ-------P-----EVNKTPLV 273 (411)
Q Consensus 208 ~-~~~~~~~~~dGIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~-~~~G~l~fGg~d~-------~-----~~~~~p~~ 273 (411)
. + .....+||||||+...+++.||.+..+.+++||+||.+. ..+|.|+||+ |+ + ++.|+|++
T Consensus 148 ~~~---~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~ 223 (403)
T 3aup_A 148 QKG---LPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLT 223 (403)
T ss_dssp SSS---SSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECE
T ss_pred ccC---CCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccc
Confidence 3 2 335689999999999999999976544469999999874 5689999999 63 3 78999997
Q ss_pred CC-CCceEEEEEEEEECCEEe-ecCCcccc--ccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCccc-ccCCCCc
Q 015184 274 PN-QPHYSINMTAVQVGLDFL-NLPTDVFG--VGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVH-TVHDEYT 348 (411)
Q Consensus 274 ~~-~~~w~v~l~~i~v~g~~~-~~~~~~~~--~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~-~~~~~~~ 348 (411)
.+ ..+|.|.+++|+|+++.+ .++...+. ......+||||||++++||+++|++|.+++.+........ .......
T Consensus 224 ~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 303 (403)
T 3aup_A 224 ITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGL 303 (403)
T ss_dssp ECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSC
T ss_pred cCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCc
Confidence 55 369999999999999988 66554432 1234569999999999999999999999997665321110 0111235
Q ss_pred eeeecCCccccCceEEEEEcCC--cEEEECCCeeeEEc-CCEEEEEEEeCCCCCCCCCCeeeecCC
Q 015184 349 CFQYSESVDEGFPNVTFHFENS--VSLKVYPHEYLFPF-EDLWCIGWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 349 C~~~~~~~~~~~P~i~f~f~gg--~~~~l~~~~yi~~~-~~~~C~~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+. |+..+.+|+|+|+|.|+ ++|+||+++|+++. ++..|++|+..+.. ..+.|||||+
T Consensus 304 c~~--c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~~~~C~~~~~~~~~---~~~~~ILG~~ 364 (403)
T 3aup_A 304 CFN--SNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQ---PRAEITLGAR 364 (403)
T ss_dssp EEC--GGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC---CEEECEEECCSC---CSSSEEECHH
T ss_pred eEE--CCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCCCeEEEEEEcCCCC---CCCcEEEChH
Confidence 654 34444799999999444 59999999999987 45789999876531 1358999984
No 16
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.8e-50 Score=384.47 Aligned_cols=272 Identities=20% Similarity=0.327 Sum_probs=224.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCC--CCCCCCC--cCCCCCcCccCCCCCCCCCceecCCCcccCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPR--RSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~--~C~~C~~--~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~ 147 (411)
.+..|+++|+||||+|++.|+|||||+++||++. .|..|.. ....|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (334)
T 1j71_A 10 EGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN------------ 77 (334)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC------------
Confidence 3689999999999999999999999999999976 6765421 12235566899999999999865
Q ss_pred CCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC
Q 015184 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (411)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~ 227 (411)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||+..
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------~~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (334)
T 1j71_A 78 ----------QDFSIEYGDLTSSQGSFYKDTVGFGGIS--------IKNQQFADVTTTS---------VDQGIMGIGFTA 130 (334)
T ss_dssp ----------EEEEEEBTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CceEEEECCCCEEEEEEEEEEEEECCEE--------EccEEEEEEEecC---------CCccEEEEcCCc
Confidence 7899999999987999999999998743 6689999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCCC----CceeecCcCCCCceEEEEEEEEECCEEe
Q 015184 228 S--------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (411)
Q Consensus 228 ~--------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (411)
. +++++|++||+|+ ++||+||.+. ...|.|+||++|+. ++.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (334)
T 1j71_A 131 DEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVT-SSVELRVHLGSINFDGTSV 209 (334)
T ss_dssp GSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEcc-CCCeEEEEEeEEEECCEec
Confidence 3 7999999999996 9999999874 45799999999975 58899996 4579999999999999887
Q ss_pred ecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCC-CceeeecCCccccCceEEEEEcCCcE
Q 015184 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDE-YTCFQYSESVDEGFPNVTFHFENSVS 372 (411)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~P~i~f~f~gg~~ 372 (411)
.. ...+||||||++++||++++++|.+++++.... ....+. ++| ..+|+|+|+|.+|++
T Consensus 210 ~~---------~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~---~~~~~~~~~C--------~~~p~i~f~f~~g~~ 269 (334)
T 1j71_A 210 ST---------NADVVLDSGTTITYFSQSTADKFARIVGATWDS---RNEIYRLPSC--------DLSGDAVFNFDQGVK 269 (334)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEET---TTTEEECSSS--------CCCSEEEEEESTTCE
T ss_pred cC---------CccEEEeCCCCcEecCHHHHHHHHHHcCCcccC---CCceEEEEcC--------CCCCceEEEEcCCcE
Confidence 53 245999999999999999999999999776521 111222 577 238999999976899
Q ss_pred EEECCCeeeEEc-CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 373 LKVYPHEYLFPF-EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 373 ~~l~~~~yi~~~-~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
++||+++|+++. ++..|+ +|... +.|||||+
T Consensus 270 ~~i~~~~y~~~~~~~~~C~~~i~~~--------~~~iLG~~ 302 (334)
T 1j71_A 270 ITVPLSELILKDSDSSICYFGISRN--------DANILGDN 302 (334)
T ss_dssp EEEEGGGGEEECSSSSCEEESEEEC--------TTCEECHH
T ss_pred EEECHHHheeecCCCCeeEEEEeEC--------CCcEEChH
Confidence 999999999987 334597 56543 35999974
No 17
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.3e-50 Score=385.01 Aligned_cols=276 Identities=22% Similarity=0.368 Sum_probs=224.1
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+||||+|++.|+|||||+++||+|..|..|.. .++.|||++|+|++.++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~------~~~~y~~~~SsT~~~~~---------------- 70 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV------XQTIYTPSKSTTAKLLS---------------- 70 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-------CCCBCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc------ccCccCCccCccceecC----------------
Confidence 56789999999999999999999999999999999987743 24799999999999864
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC---
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~--- 228 (411)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 71 -----~~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 135 (329)
T 1oew_A 71 -----GATWSISYGDGSSSSGDVYTDTVSVGGLT--------VTGQAVESAKKVSSSFT--EDSTIDGLLGLAFSTLNTV 135 (329)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCcEEEEEEEEEEEECCEE--------EeeeEEEEEEecCcccc--ccCCCceEEEecccccccc
Confidence 36899999999977999999999998753 67899999998765432 1246799999998643
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecCC
Q 015184 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (411)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (411)
+++++|++| | +++||+||.+ ...|.|+||++|+ +++.|+|+..++.+|.|.+++|+|+++.+.
T Consensus 136 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--- 209 (329)
T 1oew_A 136 SPTQQKTFFDNAKAS--LDSPVFTADLGY-HAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--- 209 (329)
T ss_dssp BSSCCCCHHHHHTTT--SSSSEEEEECCS-SSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE---
T ss_pred CcCCCCCHHHHHHHh--ccCcEEEEEccC-CCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc---
Confidence 588999987 6 5999999987 4689999999996 578999997667899999999999987653
Q ss_pred ccccccCCCcEEEcccCceeecChHHHHHHHHHHHH-hCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEEC
Q 015184 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS-QQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (411)
Q Consensus 298 ~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~-~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 376 (411)
.....+||||||+++++|++++++|++++.+ .... ....+.++|+ ..+|+|+|+| +|++++||
T Consensus 210 -----~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~ip 273 (329)
T 1oew_A 210 -----STSIDGIADTGTTLLYLPATVVSAYWAQVSGAKSSS---SVGGYVFPCS-------ATLPSFTFGV-GSARIVIP 273 (329)
T ss_dssp -----EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCEEET---TTTEEEEETT-------CCCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcEEcC---CCCEEEEECC-------CCCCcEEEEE-CCEEEEEC
Confidence 1245699999999999999999999988733 2211 1111224673 4689999999 99999999
Q ss_pred CCeeeEEc-C--CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 377 PHEYLFPF-E--DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 377 ~~~yi~~~-~--~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+++|+++. + ...|+ +|+..+ ..+.|||||+
T Consensus 274 ~~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~ 307 (329)
T 1oew_A 274 GDYIDFGPISTGSSSCFGGIQSSA-----GIGINIFGDV 307 (329)
T ss_dssp HHHHEEEESSTTCSEEEESEEEST-----TTSSEEECHH
T ss_pred HHHeeeeecCCCCCeEEEEEEeCC-----CCCceEEChH
Confidence 99999875 2 47898 466543 2368999974
No 18
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.8e-50 Score=388.16 Aligned_cols=277 Identities=21% Similarity=0.372 Sum_probs=229.5
Q ss_pred cCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 62 LPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 62 ~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
.||. ++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 54 ~pl~----~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-------~~~y~~~~SsT~~~~~---- 118 (375)
T 1miq_A 54 IELD----DVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCNSSGCSI-------KNLYDSSKSKSYEKDG---- 118 (375)
T ss_dssp CCGG----GTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCCSSGGGG-------SCCBCGGGCTTCEEEE----
T ss_pred EEcc----cCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCCcccccC-------CCcCCCccCCceEECC----
Confidence 4565 456789999999999999999999999999999999985 5654 4789999999999854
Q ss_pred ccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeec----ccCCCCCCCcc
Q 015184 140 FCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNEE 215 (411)
Q Consensus 140 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~~ 215 (411)
|.|.+.|++|++ .|.+++|+|+|++.. +++ .|||++. .. .| ...
T Consensus 119 ------------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------v~~-~Fg~~~~~~~~~~-~f---~~~ 166 (375)
T 1miq_A 119 ------------------TKVDITYGSGTV-KGFFSKDLVTLGHLS--------MPY-KFIEVTDTDDLEP-IY---SSV 166 (375)
T ss_dssp ------------------EEEEEEETTEEE-EEEEEEEEEEETTEE--------EEE-EEEEEEECGGGTT-HH---HHS
T ss_pred ------------------cEEEEEeCCCeE-EEEEEEEEEEEcCce--------ECc-EEEEEEecccccc-cc---ccC
Confidence 789999999994 999999999998753 568 9999998 43 22 234
Q ss_pred ccceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEE
Q 015184 216 ALDGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINM 283 (411)
Q Consensus 216 ~~dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l 283 (411)
..+||||||++.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|+ +++.|+|+. ...+|.|.+
T Consensus 167 ~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l 245 (375)
T 1miq_A 167 EFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLN-HDLYWQIDL 245 (375)
T ss_dssp CCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBS-SSSSSEEEE
T ss_pred CCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecC-CCceEEEEE
Confidence 6799999999764 5899999999996 9999999985 3479999999996 568999996 568999999
Q ss_pred EEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceE
Q 015184 284 TAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNV 363 (411)
Q Consensus 284 ~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 363 (411)
+ |+|+++.+ ....+||||||+++++|.+++++|.+++++.+.. ....+.++|+ . ..+|+|
T Consensus 246 ~-i~v~g~~~----------~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~---~~g~~~~~C~-----~-~~~P~i 305 (375)
T 1miq_A 246 D-VHFGKQTM----------EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP---FLPFYVTTCD-----N-KEMPTL 305 (375)
T ss_dssp E-EEETTEEE----------EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECT---TSSCEEEETT-----C-TTCCCE
T ss_pred E-EEECCEEc----------ccceEEecCCCccEEcCHHHHHHHHHHhCCcccC---CCCeEEEECC-----C-CCCCcE
Confidence 9 99999876 1456999999999999999999999999764321 1122335673 3 569999
Q ss_pred EEEEcCCcEEEECCCeeeEEc---CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 364 TFHFENSVSLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 364 ~f~f~gg~~~~l~~~~yi~~~---~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|+| +|++|+||+++|+++. +...|+ +|++.+.. .+.|||||+
T Consensus 306 ~f~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~----~~~~ILG~~ 352 (375)
T 1miq_A 306 EFKS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDID----SNTFILGDP 352 (375)
T ss_dssp EEEC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCSS----SSEEEECHH
T ss_pred EEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCC----CCcEEECHH
Confidence 9999 8999999999999987 235897 88876521 258999974
No 19
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.1e-49 Score=382.57 Aligned_cols=275 Identities=23% Similarity=0.316 Sum_probs=224.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCC--CCCCCCCc--CCCCCcCccCCCCCCCCCceecCCCcccCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI--QCKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~--~C~~C~~~--~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~ 147 (411)
.+..|+++|+||||+|++.|+|||||+++||++. .|..|..+ ...|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 2qzx_A 10 EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN------------ 77 (342)
T ss_dssp CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC------------
Confidence 4688999999999999999999999999999976 67655321 2345667899999999999865
Q ss_pred CCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC
Q 015184 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (411)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~ 227 (411)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||+..
T Consensus 78 ----------~~~~i~Yg~Gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 2qzx_A 78 ----------TRFDIKYGDGSYAKGKLYKDTVGIGGVS--------VRDQLFANVWSTS---------ARKGILGIGFQS 130 (342)
T ss_dssp ----------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEEC---------SSSCEEECSCGG
T ss_pred ----------CcEEEEeCCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEecC---------CCcCEEEEcccc
Confidence 7899999999988999999999998743 6689999999753 368999999975
Q ss_pred C--------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEe
Q 015184 228 S--------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFL 293 (411)
Q Consensus 228 ~--------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~ 293 (411)
. +++++|++||+|+ ++||+||.+. ...|.|+||++|+ +++.|+|+. ...+|.|.+++|+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~ 209 (342)
T 2qzx_A 131 GEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPIT-SEKKLTVGLRSVNVRGRNV 209 (342)
T ss_dssp GCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEE
T ss_pred ccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEecc-CCceEEEEEeEEEECCEec
Confidence 3 7999999999996 9999999874 4579999999986 578999996 4569999999999999887
Q ss_pred ecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEE
Q 015184 294 NLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSL 373 (411)
Q Consensus 294 ~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~ 373 (411)
.. ...+||||||++++||++++++|.+++++...........+.++| + .+|+|+|+|.+|+++
T Consensus 210 ~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~~~~~~~~~C-----~---~~p~i~f~f~~g~~~ 272 (342)
T 2qzx_A 210 DA---------NTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSAGNKVYVADC-----K---TSGTIDFQFGNNLKI 272 (342)
T ss_dssp EE---------EEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTTSCEEEEECT-----T---CCCEEEEEETTTEEE
T ss_pred CC---------CcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccCCCcEEEEEC-----C---CCCcEEEEECCCcEE
Confidence 53 245999999999999999999999999765421010111222466 2 389999999768999
Q ss_pred EECCCeeeEEc------CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 374 KVYPHEYLFPF------EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 374 ~l~~~~yi~~~------~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+||+++|+++. ....|+ ++... +.|||||+
T Consensus 273 ~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--------~~~iLG~~ 309 (342)
T 2qzx_A 273 SVPVSEFLFQTYYTSGKPFPKCEVRIRES--------EDNILGDN 309 (342)
T ss_dssp EEEGGGGEECCBCTTSCBCSSEEESEEEC--------SSCEECHH
T ss_pred EEcHHHhcccccccCCCCCCccEEEEecC--------CCcEeChH
Confidence 99999999973 235798 55543 35999974
No 20
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2e-49 Score=380.52 Aligned_cols=270 Identities=24% Similarity=0.375 Sum_probs=223.1
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCC--C---CCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--C---KECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~--C---~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~ 146 (411)
.+..|+++|+||||||+++|+|||||+++||++.. | ..|.. ++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 71 (339)
T 3fv3_A 10 EGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-------SGTFTPSSSSSYKNLG----------- 71 (339)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-------TCCBCGGGCTTCEEEE-----------
T ss_pred CCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-------CCcCCCccCcceeeCC-----------
Confidence 46789999999999999999999999999999543 4 45543 4799999999999865
Q ss_pred CCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCC
Q 015184 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (411)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~ 226 (411)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++.... .+||||||++
T Consensus 72 -----------~~~~i~Yg~gs~~~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~---------~~GilGLg~~ 123 (339)
T 3fv3_A 72 -----------AAFTIRYGDGSTSQGTWGKDTVTINGVS--------ITGQQIADVTQTSV---------DQGILGIGYT 123 (339)
T ss_dssp -----------EEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEESS---------SSCEEECSCG
T ss_pred -----------ceEEEEECCCceEEEEEEEEEEEECCEE--------ECceEEEEEEecCC---------CceeEEecCc
Confidence 7899999999878999999999999754 67899999998642 5899999997
Q ss_pred CC----------------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEE
Q 015184 227 NS----------------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (411)
Q Consensus 227 ~~----------------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (411)
.. +|+++|++||+|+ ++||+||.+. ...|.|+|||+|+ +++.|+|+. .+.+|.|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~ 202 (339)
T 3fv3_A 124 SNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVT-SSQALTISLA 202 (339)
T ss_dssp GGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBC-CSSSCEEEEE
T ss_pred cccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecc-cCccEEEEEE
Confidence 53 3899999999996 9999999875 3579999999996 578999996 5569999999
Q ss_pred EEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEE
Q 015184 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVT 364 (411)
Q Consensus 285 ~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 364 (411)
+|.++++.+.. ...++|||||++++||++++++|++++++.+.........+.++|+ . ..+|+|+
T Consensus 203 ~i~v~g~~~~~---------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~-----~-~~~p~i~ 267 (339)
T 3fv3_A 203 SVNLKGSSFSF---------GDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCN-----T-DTSGTTV 267 (339)
T ss_dssp EEEESSCEEEE---------EEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEEEEEECTT-----C-CCCSEEE
T ss_pred EEEECCEeecC---------CccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCceEEEecC-----C-CCCCcEE
Confidence 99999988753 2459999999999999999999999998654311001222335673 3 4589999
Q ss_pred EEEcCCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 365 FHFENSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 365 f~f~gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+|.+|++|+||+++|+++.++..|+ +|.+. +.||||++
T Consensus 268 f~f~~g~~~~v~~~~~~~~~~~~~C~~~i~~~--------~~~ilG~~ 307 (339)
T 3fv3_A 268 FNFGNGAKITVPNTEYVYQNGDGTCLWGIQPS--------DDTILGDN 307 (339)
T ss_dssp EEETTSCEEEEEGGGGEEECSSSCEEESEEEC--------SSCEECHH
T ss_pred EEECCCCEEEECHHHheeeCCCCeEEEEEEeC--------CcEEeChH
Confidence 99955899999999999987666795 88762 47999973
No 21
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.2e-49 Score=382.64 Aligned_cols=276 Identities=23% Similarity=0.356 Sum_probs=224.6
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCC--CCCCCCc--CCCCCcCccCCCCCCCCCceecCCCcccCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ--CKECPRR--SSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGG 147 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~--C~~C~~~--~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~ 147 (411)
.+..|+++|+||||+|+++|+|||||+++||++.. |..|... ...|..++.|||++|+|++..+
T Consensus 10 ~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~------------ 77 (342)
T 3pvk_A 10 EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLN------------ 77 (342)
T ss_dssp CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEE------------
T ss_pred CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecC------------
Confidence 56889999999999999999999999999999875 7666432 2346667899999999999865
Q ss_pred CCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC
Q 015184 148 PLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN 227 (411)
Q Consensus 148 ~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~ 227 (411)
|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++... ..+||||||++.
T Consensus 78 ----------~~~~i~Yg~gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~---------~~~GilGLg~~~ 130 (342)
T 3pvk_A 78 ----------TPFKIGYGDGSSSQGTLYKDTVGFGGVS--------IKNQVLADVDSTS---------IDQGILGVGYKT 130 (342)
T ss_dssp ----------EEEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEES---------SSSCEEECSCGG
T ss_pred ----------CeEEEEecCCCeEEEEEEEEEEEECCEE--------ecceEEEEEEccC---------CCccEEEecCcc
Confidence 7899999999977999999999998754 6689999998754 368999999986
Q ss_pred -------CcHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEee
Q 015184 228 -------SSMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLN 294 (411)
Q Consensus 228 -------~s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~ 294 (411)
.+|+++|++||+|+ ++||+||.+. ...|.|+|||+|+ +++.|+|+. ...+|.|.+++|.++++.+.
T Consensus 131 ~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 131 NEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVT-SDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECC-CSSSCEEEEEEEEETTEEEE
T ss_pred ccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecC-ccceEEEEEeEEEECCEEec
Confidence 47999999999996 9999999875 3579999999997 578999996 45699999999999999875
Q ss_pred cCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEE
Q 015184 295 LPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLK 374 (411)
Q Consensus 295 ~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~ 374 (411)
.. ...++|||||++++||++++++|.+++++...........+.++| + ..|+|+|+|.+|.+++
T Consensus 210 ~~--------~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~~~~~~C-----~---~~p~i~f~f~~g~~~~ 273 (342)
T 3pvk_A 210 TD--------NVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSNGNSFYEVDC-----N---LSGDVVFNFSKNAKIS 273 (342)
T ss_dssp EE--------EEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTTSCEEEEECS-----C---CCSEEEEEESTTCEEE
T ss_pred CC--------CceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCCCceEEEEec-----C---CCCceEEEECCCCEEE
Confidence 42 346999999999999999999999999766431111111133566 3 3699999995489999
Q ss_pred ECCCeeeEEc---CC---EEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 375 VYPHEYLFPF---ED---LWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 375 l~~~~yi~~~---~~---~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
||+++|+++. .+ ..|+ ++.+. +.||||++
T Consensus 274 vp~~~~~~~~~~~~g~~~~~C~~~i~~~--------~~~ilG~~ 309 (342)
T 3pvk_A 274 VPASEFAASLQGDDGQPYDKCQLLFDVN--------DANILGDN 309 (342)
T ss_dssp EEGGGGEEC----------CEEESEEEC--------TTCEECHH
T ss_pred EcHHHheeeccccCCCcCCeeEEEEeeC--------CCeEeCHH
Confidence 9999999973 22 6797 66552 47999973
No 22
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.4e-49 Score=390.57 Aligned_cols=278 Identities=20% Similarity=0.331 Sum_probs=230.2
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCC
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~ 138 (411)
..||. ++.+..|+++|+||||||++.|++||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 128 ~~pL~----n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~~-------~~~ydps~SsT~~~~~--- 193 (451)
T 3qvc_A 128 NVELK----DLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCES-------KNHYDSSKSKTYEKDD--- 193 (451)
T ss_dssp CCCGG----GGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGTT-------SCCBCGGGCTTCEEEE---
T ss_pred cccee----ecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccCC-------CCCCCCCCCcccccCC---
Confidence 45665 567889999999999999999999999999999999983 5654 3799999999999854
Q ss_pred cccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeec----ccCCCCCCCc
Q 015184 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGAR----QSGNLDSTNE 214 (411)
Q Consensus 139 ~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~----~~~~~~~~~~ 214 (411)
+.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++. .++ + ..
T Consensus 194 -------------------~~f~i~YgdGs-~~G~~~~Dtv~igg~~--------v~-~~Fg~a~~t~~~~~~-f---~~ 240 (451)
T 3qvc_A 194 -------------------TPVKLTSKAGT-ISGIFSKDLVTIGKLS--------VP-YKFIEMTEIVGFEPF-Y---SE 240 (451)
T ss_dssp -------------------EEEEEECSSEE-EEEEEEEEEEEETTEE--------EE-EEEEEEEEEEECTTH-H---HH
T ss_pred -------------------CEEEEEECCCE-EEEEEEEEEEEECCEE--------EE-EEEEEEEeccccCCC-c---cC
Confidence 78999999999 6999999999998753 66 99999998 554 3 34
Q ss_pred cccceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEE
Q 015184 215 EALDGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSIN 282 (411)
Q Consensus 215 ~~~dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~ 282 (411)
...+||||||++.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|+ +++.|+|+. ++.+|.|.
T Consensus 241 ~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~-~~~~w~v~ 319 (451)
T 3qvc_A 241 SDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLN-HDLMWQVD 319 (451)
T ss_dssp SCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECS-STTSSEEE
T ss_pred CCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcc-cCCeeEEE
Confidence 56799999999753 6999999999996 9999999986 3479999999997 578999996 67899999
Q ss_pred EEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCce
Q 015184 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPN 362 (411)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~ 362 (411)
++ |+|+++ . .....++|||||+++++|++++++|.+++++.... .. .+|..+|+ ...+|+
T Consensus 320 l~-I~Vgg~-~---------~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~---~~-----g~y~v~C~-~~~~P~ 379 (451)
T 3qvc_A 320 LD-VHFGNV-S---------SKKANVILDSATSVITVPTEFFNQFVESASVFKVP---FL-----SLYVTTCG-NTKLPT 379 (451)
T ss_dssp EE-EEETTE-E---------EEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT---TS-----SCEEEETT-CTTCCC
T ss_pred EE-EEECCc-c---------CCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC---CC-----CeEEeeCC-cCcCCc
Confidence 99 999987 1 11456999999999999999999999998665331 11 22333445 567999
Q ss_pred EEEEEcCCcEEEECCCeeeEEc---CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 363 VTFHFENSVSLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 363 i~f~f~gg~~~~l~~~~yi~~~---~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+|+| +|.+++||+++|+++. ++..|+ +|++.+.. .+.|||||+
T Consensus 380 itf~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~----~~~~ILG~~ 427 (451)
T 3qvc_A 380 LEYRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLE----KNTFVLGDP 427 (451)
T ss_dssp EEEEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCCS----TTEEEECHH
T ss_pred EEEEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCCC----CCCEEECHH
Confidence 99999 8999999999999986 247897 78775421 368999974
No 23
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4e-50 Score=395.53 Aligned_cols=278 Identities=21% Similarity=0.328 Sum_probs=227.7
Q ss_pred cCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCCc
Q 015184 62 LPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQE 139 (411)
Q Consensus 62 ~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~ 139 (411)
.||. ++.+..|+++|+||||||++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 130 ~~L~----n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~~~~C~~-------~~~ydps~SsT~~~~~---- 194 (453)
T 2bju_A 130 IELV----DFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCTTAGCLT-------KHLYDSSKSRTYEKDG---- 194 (453)
T ss_dssp EEEE----EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSTTGGG-------SCCBCGGGCTTCEEEE----
T ss_pred eeeE----ecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCCccccCC-------CCcCCCccCCceeECC----
Confidence 5564 457889999999999999999999999999999999985 5654 4789999999999854
Q ss_pred ccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeeccc--CCCCCCCcccc
Q 015184 140 FCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQS--GNLDSTNEEAL 217 (411)
Q Consensus 140 ~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~--~~~~~~~~~~~ 217 (411)
|.|.+.|++|+ +.|.+++|+|+|++.. ++ +.|||++... +... .....
T Consensus 195 ------------------~~~~i~YgdGs-~~G~~~~Dtv~ig~~~--------v~-~~Fg~a~~~~~~g~~f--~~~~~ 244 (453)
T 2bju_A 195 ------------------TKVEMNYVSGT-VSGFFSKDLVTVGNLS--------LP-YKFIEVIDTNGFEPTY--TASTF 244 (453)
T ss_dssp ------------------EEEEEECSSSE-EEEEEEEEEEEETTEE--------EE-EEEEEEEECGGGTTHH--HHSSC
T ss_pred ------------------cEEEEEcCCCC-eEEEEEEEEEEEeCcE--------EE-EEEEEEEEecccCccc--cccCC
Confidence 78999999999 4999999999998743 66 9999999876 4321 23468
Q ss_pred ceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCC-CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEE
Q 015184 218 DGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGI-NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTA 285 (411)
Q Consensus 218 dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~-~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~ 285 (411)
+||||||++.. +++++|++||+|+ ++||+||.+. ..+|.|+|||+|+ +++.|+|+. .+.+|.|.++
T Consensus 245 dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~-~~~~w~V~l~- 322 (453)
T 2bju_A 245 DGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLN-HDLYWQITLD- 322 (453)
T ss_dssp CEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEE-EETTEEEEEE-
T ss_pred ceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecC-CCceEEEEEE-
Confidence 99999999753 6899999999996 9999999985 3579999999996 568999996 5689999999
Q ss_pred EEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCccccc-CCCCceeeecCCccccCceEE
Q 015184 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTV-HDEYTCFQYSESVDEGFPNVT 364 (411)
Q Consensus 286 i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~P~i~ 364 (411)
|+|+++ + . ....+||||||+++++|++++++|.+++++... ..+ .+.++| .. ..+|+|+
T Consensus 323 I~Vgg~-~-~--------~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~~----~~g~~~~v~C-----~~-~~~P~it 382 (453)
T 2bju_A 323 AHVGNI-M-L--------EKANCIVDSGTSAITVPTDFLNKMLQNLDVIKV----PFLPFYVTLC-----NN-SKLPTFE 382 (453)
T ss_dssp EEETTE-E-E--------EEEEEEECTTCCSEEECHHHHHHHTTTSSCEEC----TTSSCEEEET-----TC-TTCCCEE
T ss_pred EEECcE-E-e--------ccccEEEcCCCCeEecCHHHHHHHHHHhCCccc----CCCceEEEec-----CC-CCCCcEE
Confidence 999993 3 1 245799999999999999999999988865421 111 223456 43 5699999
Q ss_pred EEEcCCcEEEECCCeeeEEcC---CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 365 FHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 365 f~f~gg~~~~l~~~~yi~~~~---~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+| +|++++||+++|+++.. +..|+ +|++.+. ..+.|||||+
T Consensus 383 f~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~----~~~~~ILGd~ 428 (453)
T 2bju_A 383 FTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDF----PVPTFILGDP 428 (453)
T ss_dssp EEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECCC----SSCEEEECHH
T ss_pred EEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCCC----CCCCEEECHH
Confidence 999 89999999999999872 35897 8887652 1248999984
No 24
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=9.9e-49 Score=389.52 Aligned_cols=291 Identities=22% Similarity=0.302 Sum_probs=229.1
Q ss_pred CCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCC
Q 015184 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (411)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (411)
..+..|+++|+||||+|+|+|+|||||+++||+|..| |.. ++.|||++|+||+..+
T Consensus 71 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~~-------~~~y~~~~SsT~~~~~--------------- 126 (455)
T 3lpj_A 71 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR--------------- 126 (455)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE---------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--ccc-------CCcccCCCCCCcccCC---------------
Confidence 3556899999999999999999999999999999887 433 3789999999999865
Q ss_pred CCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC---
Q 015184 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (411)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~--- 227 (411)
|.|.+.|++|+. .|.+++|+|+|++.... ...+.|+++......+. ....++||||||++.
T Consensus 127 -------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 190 (455)
T 3lpj_A 127 -------KGVYVPYTQGKW-EGELGTDLVSIPHGPNV------TVRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 190 (455)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEECTTSCSC------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -------ccEEEEeCCeEE-EEEEEEEEEEECCCcce------eeEEEEEEEEccCcccc--cCCCcceEEEeCcccccc
Confidence 789999999997 99999999999852100 11356888887665542 235789999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecCC-----------CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEE
Q 015184 228 -----SSMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (411)
Q Consensus 228 -----~s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~ 287 (411)
.+++++|++|++|+++||+||.+. ..+|.|+||++|+ +++.|+|+. ...+|.|.+++|+
T Consensus 191 ~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 269 (455)
T 3lpj_A 191 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 269 (455)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred ccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecC-CCceeEEEEeEEE
Confidence 368999999999988999999742 3579999999997 568999996 5689999999999
Q ss_pred ECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccc---cCCCCceeeecCCccccCceEE
Q 015184 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (411)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~ 364 (411)
|+++.+.++...+ ....+||||||++++||.+++++|++++++......... ..+.++|+.........+|+|+
T Consensus 270 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 270 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEcccccccc---CCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEE
Confidence 9999887654332 256799999999999999999999999998854211111 1224799765543344699999
Q ss_pred EEEcCCc------EEEECCCeeeEEcC-----CEEEEEEEeCCCCCCCCCCeeeecCC
Q 015184 365 FHFENSV------SLKVYPHEYLFPFE-----DLWCIGWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 365 f~f~gg~------~~~l~~~~yi~~~~-----~~~C~~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+| +|. +|+|++++|+++.. ...|++|.... ..+.||||++
T Consensus 347 f~f-~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~-----~~~~~ILG~~ 398 (455)
T 3lpj_A 347 LYL-MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAV 398 (455)
T ss_dssp EEE-ECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEE-----ESSCEEECHH
T ss_pred EEE-cCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccC-----CCCcEEEChH
Confidence 999 554 59999999999862 25898642211 1257999974
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.6e-49 Score=377.81 Aligned_cols=282 Identities=17% Similarity=0.245 Sum_probs=229.2
Q ss_pred CcCCCCCCCCCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC--CCCCcCCCCCcCccCCCCCCCCCceecCCC
Q 015184 61 DLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK--ECPRRSSLGIELTLYDIKDSSTGKFVTCDQ 138 (411)
Q Consensus 61 ~~pl~~~~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~--~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~ 138 (411)
..||. ++.+..|+++|+|| +|+++|+|||||+++||+|..|. .|.. ..++.|||++| |++..+
T Consensus 8 ~~~l~----n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----~~~~~y~~~~S-T~~~~~--- 72 (330)
T 1yg9_A 8 YKLVH----VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVC-----PNLQKYEKLKP-KYISDG--- 72 (330)
T ss_dssp CSCEE----EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGS-----TTCCCCCCSSC-EEEEEE---
T ss_pred Eeeee----cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCcc-----cccCccCCCCC-ceEECC---
Confidence 44554 56778999999999 89999999999999999999986 5721 22379999999 998754
Q ss_pred cccCCCCCCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccc
Q 015184 139 EFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALD 218 (411)
Q Consensus 139 ~~C~~~~~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~d 218 (411)
+.|.+.|++|+. .|.+++|+|+|++.. ++++.|||++.....| ....++
T Consensus 73 -------------------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~~~--------~~~~~fg~~~~~~~~f---~~~~~~ 121 (330)
T 1yg9_A 73 -------------------NVQVKFFDTGSA-VGRGIEDSLTISQLT--------TSQQDIVLADELSQEV---CILSAD 121 (330)
T ss_dssp -------------------EEEEEETTTEEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECTHH---HHTTCS
T ss_pred -------------------CEEEEEECCceE-EEEEEEEEEEECCEE--------EcCeEEEEEEEccccc---ccccCc
Confidence 689999999997 999999999998753 6689999999873323 234679
Q ss_pred eeeecCCCCCc-------HHHHhhhcCCCCCceEEeecCC-CC--CceeeeCCcCC----CCceeecCcCCCCceEEEEE
Q 015184 219 GIIGFGKSNSS-------MISQLASSGGVRKMFAHCLDGI-NG--GGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMT 284 (411)
Q Consensus 219 GIlGLg~~~~s-------~~~~l~~~g~i~~~Fs~~l~~~-~~--~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~ 284 (411)
||||||++..+ ++++|++||+|+++||+||.+. .. +|.|+||++|+ +++.|+|+. .+.+|.|.++
T Consensus 122 GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~ 200 (330)
T 1yg9_A 122 VVVGIAAPGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLV-GDDSWKFRLD 200 (330)
T ss_dssp EEEECSCTTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBS-CTTSCCEECS
T ss_pred eEEEcCcchhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECC-CCCEEEEEeC
Confidence 99999998754 9999999998889999999875 22 79999999997 568999996 6789999999
Q ss_pred EEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCC-CCceeeecCCccccCceE
Q 015184 285 AVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHD-EYTCFQYSESVDEGFPNV 363 (411)
Q Consensus 285 ~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~P~i 363 (411)
+|+|+++.+. .....+||||||+++++|++++++|.+++++...... ...+ .++| +....+|+|
T Consensus 201 ~i~v~~~~~~--------~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~~g--~~~~~~~~C-----~~~~~~p~i 265 (330)
T 1yg9_A 201 GVKIGDTTVA--------PAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVVEKTT--TRRICKLDC-----SKIPSLPDV 265 (330)
T ss_dssp EEEETTEEEE--------CTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEEEECS--SCEEEEECG-----GGGGGSCCE
T ss_pred eEEECCEEEc--------CCCcEEEEecCCccccCCHHHHHHHHHHhCCcccCCC--ceEEEEEEC-----CCccccCcE
Confidence 9999998763 2256799999999999999999999999966432110 0012 2455 545579999
Q ss_pred EEEEcCCcEEEECCCeeeEEcCCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 364 TFHFENSVSLKVYPHEYLFPFEDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 364 ~f~f~gg~~~~l~~~~yi~~~~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+|+| +|++++||+++|+++. +..|+ +|++.. ..+.|||||+
T Consensus 266 ~f~f-gg~~~~l~~~~y~~~~-~~~C~~~i~~~~-----~~~~~ilG~~ 307 (330)
T 1yg9_A 266 TFVI-NGRNFNISSQYYIQQN-GNLCYSGFQPCG-----HSDHFFIGDF 307 (330)
T ss_dssp EEEE-TTEEEEECHHHHEEEE-TTEEEESEEEET-----TCSSEEECHH
T ss_pred EEEE-CCEEEEECHHHhcccC-CCcEEEEEEeCC-----CCCeEEecHH
Confidence 9999 9999999999999986 66897 777642 1358999974
No 26
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=9.9e-48 Score=373.99 Aligned_cols=305 Identities=18% Similarity=0.303 Sum_probs=226.2
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCC
Q 015184 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPL 149 (411)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~ 149 (411)
+..+.+|+++|+|||| |+|||||+++||+|..|. +++.+.|.++.|........
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~---------------------~~~~~~C~s~~C~~~~~~~~ 63 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQ---------------------PPAEIPCSSPTCLLANAYPA 63 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTC---------------------CCCCCBTTSHHHHHHHSSCC
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCC---------------------CCCccCCCCchhccccCCCC
Confidence 5668899999999998 999999999999987541 13345555555543222222
Q ss_pred CCCCC--------CCCC-CceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCc----eEEeeeecccCCCCCCCccc
Q 015184 150 TDCTA--------NTSC-PYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGS----LIFGCGARQSGNLDSTNEEA 216 (411)
Q Consensus 150 ~~c~~--------~~~~-~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~----~~Fg~~~~~~~~~~~~~~~~ 216 (411)
..|.. +..| .|.+.|++|+.++|.+++|+|+|++..+.. .+++ +.|||+....... ....
T Consensus 64 ~sc~~~~~~~~~~~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~----~v~~~~~~~~Fg~~~~~~~~~---~~~~ 136 (381)
T 1t6e_X 64 PGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK----PVSKVNVGVLAACAPSKLLAS---LPRG 136 (381)
T ss_dssp TTCCCCCC------CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSS----EEEEEEEEEEEEECCGGGGTT---SCTT
T ss_pred CCCCCccCCcCcCCCccccccccccCCceeeEEEEEEEEEeeccCCCc----cccceeeeeEeecCcccccCC---CCCC
Confidence 23321 2345 599999999988999999999999753221 1333 3679998763211 1246
Q ss_pred cceeeecCCCCCcHHHHhhhcCCCCCceEEeecCCCCCceeeeCCcCC------CCceeecCcCC--CCceEEEEEEEEE
Q 015184 217 LDGIIGFGKSNSSMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQ------PEVNKTPLVPN--QPHYSINMTAVQV 288 (411)
Q Consensus 217 ~dGIlGLg~~~~s~~~~l~~~g~i~~~Fs~~l~~~~~~G~l~fGg~d~------~~~~~~p~~~~--~~~w~v~l~~i~v 288 (411)
+|||||||++..+++.||.+|++++++||+||.+. .+|.|+||++|. +++.|+|++.+ .++|+|.+++|+|
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~-~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~v 215 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTG-GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVV 215 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSS-SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEE
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCC-CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEE
Confidence 89999999999999999999997789999999884 689999999874 57999999754 2578899999999
Q ss_pred CCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCC-------CCcc--cccCCCCceeeecCCc---
Q 015184 289 GLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQP-------DLKV--HTVHDEYTCFQYSESV--- 356 (411)
Q Consensus 289 ~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~-------~~~~--~~~~~~~~C~~~~~~~--- 356 (411)
+++.+.++...|. .+++||||||++++||+++|++|.+++.+... .... .......+|+..++..
T Consensus 216 g~~~~~~~~~~~~---~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~ 292 (381)
T 1t6e_X 216 GDTRVPVPEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNL 292 (381)
T ss_dssp TTEECCCCTTCSC---TTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEET
T ss_pred cCEEecCCHHHcc---CCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccc
Confidence 9998876655443 46799999999999999999999999977542 1111 1122346998766432
Q ss_pred -cccCceEEEEEcCCcEEEECCCeeeEEc-CCEEEEEEEeCCCCC--CCCCCeeeecCC
Q 015184 357 -DEGFPNVTFHFENSVSLKVYPHEYLFPF-EDLWCIGWQNSGMQS--RDRKNMTLLGDF 411 (411)
Q Consensus 357 -~~~~P~i~f~f~gg~~~~l~~~~yi~~~-~~~~C~~~~~~~~~~--~~~~~~~ILGdv 411 (411)
...+|+|+|+|.||++|+||+++|+++. ++..|++|++..... ....+.|||||+
T Consensus 293 ~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~~~~~~ILGd~ 351 (381)
T 1t6e_X 293 GGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGA 351 (381)
T ss_dssp TEECCCCEEEEETTSCEEEECHHHHEEEEETTEEEESEEECCCCC------CSEEECHH
T ss_pred cCCcCCeEEEEECCCcEEEeCCCeEEEEcCCCeEEEEEEcCCCcccccCCCceEEEChH
Confidence 1368999999955799999999999986 677999988765210 011258999984
No 27
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-47 Score=373.87 Aligned_cols=290 Identities=23% Similarity=0.352 Sum_probs=226.5
Q ss_pred CCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCC
Q 015184 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLT 150 (411)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~ 150 (411)
..+..|+++|+||||+|+++|+|||||+++||+|..|..|. +.|||++|+||+..+
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~---------~~f~~~~SsT~~~~~--------------- 65 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID---------TYFDTERSSTYRSKG--------------- 65 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS---------CCCCGGGCTTCEEEE---------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc---------cCcccccCccceeCC---------------
Confidence 45668999999999999999999999999999998886653 689999999999865
Q ss_pred CCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC--
Q 015184 151 DCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (411)
Q Consensus 151 ~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~-- 228 (411)
|.|.+.|++|++ .|.+++|+|+|++.... ...+.|++..+..+.+. ....++||||||++..
T Consensus 66 -------~~~~i~Yg~Gs~-~G~~~~Dtv~i~~~~~~------~~~~~~~~~~~~~~~~~--~~~~~dGilGLg~~~~s~ 129 (383)
T 2ewy_A 66 -------FDVTVKYTQGSW-TGFVGEDLVTIPKGFNT------SFLVNIATIFESENFFL--PGIKWNGILGLAYATLAK 129 (383)
T ss_dssp -------EEEEEECSSCEE-EEEEEEEEEEETTTEEE------EEEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred -------ceEEEEECCcEE-EEEEEEEEEEECCCccc------eeEEEEEEEEeecceee--ccCcCceEEecCchhccc
Confidence 789999999986 99999999999853210 11366888766554442 2346799999998653
Q ss_pred ------cHHHHhhhcCCCCCceEEeecC--------CCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECC
Q 015184 229 ------SMISQLASSGGVRKMFAHCLDG--------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGL 290 (411)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~--------~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g 290 (411)
+++++|++|+.++++||+||.+ ...+|.|+||++|+ +++.|+|+. +..+|.|.+++|+|++
T Consensus 130 ~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~g 208 (383)
T 2ewy_A 130 PSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIK-EEWYYQIEILKLEIGG 208 (383)
T ss_dssp SCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECS-SBTTBBCCEEEEEETT
T ss_pred ccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecC-CCceEEEEEEEEEECC
Confidence 5899999999998899999963 14579999999995 679999996 4689999999999999
Q ss_pred EEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccc---cCCCCceeeecCCccccCceEEEEE
Q 015184 291 DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVTFHF 367 (411)
Q Consensus 291 ~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~f~f 367 (411)
+.+.++...+. ...+||||||++++||++++++|++++.+......... ..+.++|+.........+|+|+|+|
T Consensus 209 ~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 285 (383)
T 2ewy_A 209 QSLNLDCREYN---ADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIYL 285 (383)
T ss_dssp EECCCCTTTTT---SSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEEE
T ss_pred EEccccccccC---CccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEEE
Confidence 98876544331 46799999999999999999999999988754211111 1124689865443335699999999
Q ss_pred cCC-----cEEEECCCeeeEEc----CCEEEEEE--EeCCCCCCCCCCeeeecCC
Q 015184 368 ENS-----VSLKVYPHEYLFPF----EDLWCIGW--QNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 368 ~gg-----~~~~l~~~~yi~~~----~~~~C~~~--~~~~~~~~~~~~~~ILGdv 411 (411)
.|+ .+++||+++|+.+. .+..|++| .+. .+.|||||+
T Consensus 286 ~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~ 333 (383)
T 2ewy_A 286 RDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPS-------TNALVIGAT 333 (383)
T ss_dssp ECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEE-------SSCEEECHH
T ss_pred CCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCC-------CCcEEEChH
Confidence 443 37999999999876 25689754 332 247999974
No 28
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=5.2e-48 Score=368.17 Aligned_cols=273 Identities=20% Similarity=0.317 Sum_probs=220.6
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+|| +|+++|+|||||+++||+|..|..|.- ..++.|||++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQ-----TGHDLYTPSSSA-TKL------------------ 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHH-----TTSCCCBCCSSC-EEC------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCcccc-----CCCCCCCchhcC-Ccc------------------
Confidence 568899999999 899999999999999999999986642 234799999999 543
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC---
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~--- 228 (411)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+.+. .....+||||||++..
T Consensus 66 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 ----SGYSWDISYGDGSSASGDVYRDTVTVGGVT--------TNKQAVEAASKISSEFV--QDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp ----TTCBEEEECSSSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TSTTCCEEEECSCGGGCCC
T ss_pred ----CCCEEEEEeCCCCEEEEEEEEeEEEECCEE--------EcceEEEEEEecCcccc--ccCCCceEEEeCccccccc
Confidence 258999999999977999999999998753 66899999998765432 2246899999999653
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecCC
Q 015184 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (411)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (411)
+++++|++| + +++||+||.+ +..|.|+||++|+ +++.|+|+..+..+|.|.+++|+|+++.+.
T Consensus 132 ~p~~~~~~~~~l~~~--i~~~~FS~~l~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~--- 205 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ--LDSPLFAVQLKH-DAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSS--- 205 (325)
T ss_dssp BSSCCCCHHHHHGGG--SSSSEEEEEEET-TEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCB---
T ss_pred CcCCCCCHHHHHHHh--cCCcEEEEEecC-CCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeecc---
Confidence 478999987 6 5999999997 4689999999996 679999997667899999999999987652
Q ss_pred ccccccCCCcEEEcccCceeecChHHHHHHHHHHH-HhCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEEC
Q 015184 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKII-SQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (411)
Q Consensus 298 ~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~-~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 376 (411)
.....+||||||+++++|++++++|.+++. +.... ....+.++|+ ..+|+|+|+| +|++++||
T Consensus 206 -----~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~i~ 269 (325)
T 1ibq_A 206 -----SSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQESY---EAGGYVFSCS-------TDLPDFTVVI-GDYKAVVP 269 (325)
T ss_dssp -----SCCEEEEECTTCCSEEECHHHHHHHHTTSTTCBCCS---SSSSCEEETT-------CCCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCCcEeCCHHHHHHHHHhCCCceEcC---cCCeEEEEcC-------CCCCcEEEEE-CCEEEEEC
Confidence 235679999999999999999999999884 33221 1122335673 3689999999 99999999
Q ss_pred CCeeeEEc-C--CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 377 PHEYLFPF-E--DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 377 ~~~yi~~~-~--~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+++|+++. + ...|+ +|++.+ +.+.|||||+
T Consensus 270 ~~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~iLG~~ 303 (325)
T 1ibq_A 270 GKYINYAPVSTGSSTCYGGIQSNS-----GLGLSILGDV 303 (325)
T ss_dssp HHHHEEEESSTTCSEEEESEEECT-----TTCSEEECHH
T ss_pred HHHhcccccCCCCCeEEEEEEcCC-----CCCceEEChH
Confidence 99999875 2 37898 576643 2368999974
No 29
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3.2e-47 Score=372.43 Aligned_cols=288 Identities=23% Similarity=0.313 Sum_probs=226.3
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+||||+|+++|+|||||+++||+|..|..| ++.|||++|+||+..+
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~---------~~~y~~~~SsT~~~~~---------------- 73 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL---------HRYYQRQLSSTYRDLR---------------- 73 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC---------SCCCCGGGCTTCEEEE----------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc---------cCCcCcccCCCceeCC----------------
Confidence 467899999999999999999999999999999888654 2689999999999865
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEec-ccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC--
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS-- 228 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~-- 228 (411)
|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|++..+..+.|. ....++||||||+...
T Consensus 74 ------~~~~i~Yg~Gs~-~G~~~~Dtv~ig~g~~~~-------~~~~~~~~~~~~~~f~--~~~~~dGIlGLg~~~~s~ 137 (395)
T 2qp8_A 74 ------KGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 137 (395)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------ceEEEEECCcEE-EEEEEeEEEEECCCCCce-------EEEEEEEEEccCcccc--cccCccceEEcCchhhcc
Confidence 789999999997 9999999999973 2211 1356787776554442 2356899999998653
Q ss_pred ------cHHHHhhhcCCCCCceEEeecCC-----------CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEE
Q 015184 229 ------SMISQLASSGGVRKMFAHCLDGI-----------NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (411)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~~-----------~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~ 287 (411)
+++++|++|++|+++||+||.+. ..+|.|+||++|+ +++.|+|+. ++.+|.|.+++|+
T Consensus 138 ~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~ 216 (395)
T 2qp8_A 138 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 216 (395)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECC-SBTTBBCCEEEEE
T ss_pred CCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccC-CCceEEEEEEEEE
Confidence 68999999999988999999752 3579999999996 468999996 4689999999999
Q ss_pred ECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccc---cCCCCceeeecCCccccCceEE
Q 015184 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (411)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~ 364 (411)
|+++.+.++...+. ...+||||||++++||++++++|.+++.+......... ..+.++|+.........+|+|+
T Consensus 217 v~g~~~~~~~~~~~---~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 293 (395)
T 2qp8_A 217 INGQDLKMDCKEYN---YDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 293 (395)
T ss_dssp ETTEECCCCGGGGG---SSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred ECCEEcccCccccC---CceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcEE
Confidence 99998866544332 45799999999999999999999999988754221111 1124689865543444699999
Q ss_pred EEEcCCc-----EEEECCCeeeEEcC-----CEEEE--EEEeCCCCCCCCCCeeeecCC
Q 015184 365 FHFENSV-----SLKVYPHEYLFPFE-----DLWCI--GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 365 f~f~gg~-----~~~l~~~~yi~~~~-----~~~C~--~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+|.|+. +|+|+|++|+.+.. ...|+ ++.+. .+.|||||+
T Consensus 294 f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~-------~~~~ILG~~ 345 (395)
T 2qp8_A 294 LYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-------STGTVMGAV 345 (395)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEE-------SSCEEECHH
T ss_pred EEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCC-------CCcEEEChH
Confidence 9994432 79999999999852 24896 44432 257999974
No 30
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=6.5e-47 Score=371.17 Aligned_cols=289 Identities=22% Similarity=0.309 Sum_probs=225.0
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+||||+|+++|+|||||+++||+|..| |.. ++.|||++|+||+..+
T Consensus 26 ~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~~-------~~~y~~~~SsT~~~~~---------------- 80 (402)
T 3vf3_A 26 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PFL-------HRYYQRQLSSTYRDLR---------------- 80 (402)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TTC-------SCCCCGGGCTTCEEEE----------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Ccc-------cCCcCcccCcccccCC----------------
Confidence 456899999999999999999999999999999887 432 3689999999999865
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEec-ccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCC---
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK-VSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSN--- 227 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~-~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~--- 227 (411)
|.|.+.|++|+. .|.+++|+|+|++ .... ..+.|+++......+. ....++||||||++.
T Consensus 81 ------~~~~i~Yg~Gs~-~G~~~~D~v~ig~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 81 ------KGVYVPYTQGKW-EGELGTDLVSIPHGPNVT-------VRANIAAITESDKFFI--NGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp ------EEEEEECSSCEE-EEEEEEEEEECTTSCSCE-------EEEEEEEEEEEESCSC--TTCCCCEEEECSCGGGCS
T ss_pred ------CEEEEEECcEEE-EEEEEEEEEEECCccccc-------eeeeEEEEEccccccc--cCCCccceEEcCchhhcc
Confidence 789999999996 9999999999984 2211 1245787777665442 245689999999864
Q ss_pred -----CcHHHHhhhcCCCCCceEEeecC-----------CCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEE
Q 015184 228 -----SSMISQLASSGGVRKMFAHCLDG-----------INGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQ 287 (411)
Q Consensus 228 -----~s~~~~l~~~g~i~~~Fs~~l~~-----------~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~ 287 (411)
.+++++|++|++|+++||+||.+ ....|.|+||++|+ +++.|+|+. .+.+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIR-REWYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECS-SBTTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCC-cCcEEEEEEeEEE
Confidence 36899999999998899999964 13479999999997 568899996 5689999999999
Q ss_pred ECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccc---cCCCCceeeecCCccccCceEE
Q 015184 288 VGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHT---VHDEYTCFQYSESVDEGFPNVT 364 (411)
Q Consensus 288 v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~---~~~~~~C~~~~~~~~~~~P~i~ 364 (411)
|+++.+.++...+ ....+||||||++++||.+++++|++++++......... ..+.++|+.........+|+|+
T Consensus 224 v~g~~~~~~~~~~---~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~ 300 (402)
T 3vf3_A 224 INGQDLKMDCKEY---NYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 300 (402)
T ss_dssp ETTEECCCCGGGG---GSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEE
T ss_pred ECCEEeccccccc---CCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceE
Confidence 9999887654322 256799999999999999999999999998853111111 1124799865544344799999
Q ss_pred EEEcCCc------EEEECCCeeeEEcCC-----EEEEEEEeCCCCCCCCCCeeeecCC
Q 015184 365 FHFENSV------SLKVYPHEYLFPFED-----LWCIGWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 365 f~f~gg~------~~~l~~~~yi~~~~~-----~~C~~~~~~~~~~~~~~~~~ILGdv 411 (411)
|+| +|. +++||+++|+++... ..|++|.... ..+.||||++
T Consensus 301 f~f-~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~-----~~~~~ILG~~ 352 (402)
T 3vf3_A 301 LYL-MGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQ-----SSTGTVMGAV 352 (402)
T ss_dssp EEE-ECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEE-----ESSCEEECHH
T ss_pred EEE-ecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccC-----CCCcEEEChH
Confidence 999 554 599999999998721 5898642211 1257999974
No 31
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=8.6e-48 Score=366.21 Aligned_cols=273 Identities=21% Similarity=0.300 Sum_probs=218.9
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+|| +|+++|+|||||+++||+|..|..|.- ..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~------------------ 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSER-----SGHDYYTPGSSA-QKI------------------ 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH-----TTCCCBCCCTTC-EEE------------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCcccc-----cCCCCCCccccC-Ccc------------------
Confidence 467899999999 799999999999999999999976632 234789999999 553
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC---
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~--- 228 (411)
+.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++...+.+. .....+||||||++..
T Consensus 67 ----~~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 ----DGATWSISYGDGSSASGDVYKDKVTVGGVS--------YDSQAVESAEKVSSEFT--QDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp ----EEEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--HCTTCCEEEECSCGGGCCC
T ss_pred ----CCCeEEEEcCCCCeEEEEEEEEEEEECCEE--------ECceEEEEEEecccccc--ccCCCceEEecCccccccc
Confidence 247999999999977999999999998753 67899999998765432 1246799999998643
Q ss_pred ------cHHHHhhhcCCCCCceEEeecCCCCCceeeeCCcCCC----CceeecCcCCCCceEEEEEEEEECCEEeecCCc
Q 015184 229 ------SMISQLASSGGVRKMFAHCLDGINGGGIFAIGHVVQP----EVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTD 298 (411)
Q Consensus 229 ------s~~~~l~~~g~i~~~Fs~~l~~~~~~G~l~fGg~d~~----~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~ 298 (411)
+++++|++| +-+++||+||.+ +..|.|+||++|+. ++.|+|+..+..+|.|.+++|+|++ .+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~---- 205 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKH-NAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSS---- 205 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCT-TSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEE----
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccC-CCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-ccc----
Confidence 578999987 335999999987 46899999999974 5899999766789999999999999 442
Q ss_pred cccccCCCcEEEcccCceeecChHHHHHHHHHHHH-hCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEECC
Q 015184 299 VFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS-QQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYP 377 (411)
Q Consensus 299 ~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~-~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~ 377 (411)
.....+||||||+++++|++++++|.+++.+ .... ....+.++| + ..+|+|+|+| +|++++||+
T Consensus 206 ----~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~~~~---~~g~~~~~C-----~--~~~P~i~f~f-gg~~~~i~~ 270 (323)
T 1izd_A 206 ----SDSITGIADTGTTLLLLDDSIVDAYYEQVNGASYDS---SQGGYVFPS-----S--ASLPDFSVTI-GDYTATVPG 270 (323)
T ss_dssp ----CCCEEEEECTTCCSEEECHHHHHHHHTTSTTCEEET---TTTEEEEET-----T--CCCCCEEEEE-TTEEEEECH
T ss_pred ----CCCceEEEeCCCcceeCCHHHHHHHHHhCCCcEEcC---cCCEEEEEC-----C--CCCceEEEEE-CCEEEecCH
Confidence 2356799999999999999999999988842 2211 111223466 3 4689999999 999999999
Q ss_pred CeeeEEc-CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 378 HEYLFPF-EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 378 ~~yi~~~-~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
++|+++. ++..|+ +|++.+ +.+.|||||+
T Consensus 271 ~~~~~~~~~~~~C~~~i~~~~-----~~~~~IlG~~ 301 (323)
T 1izd_A 271 EYISFADVGNGQTFGGIQSNS-----GIGFSIFGDV 301 (323)
T ss_dssp HHHEEEECSTTEEEESEEECT-----TTSSEEECHH
T ss_pred HHeEEecCCCCeEEEEEEcCC-----CCCcEEEChH
Confidence 9999886 567898 577653 2368999974
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=9.1e-48 Score=366.17 Aligned_cols=271 Identities=21% Similarity=0.349 Sum_probs=218.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTD 151 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~ 151 (411)
.+..|+++|+|| +|++.|+|||||+++||+|..|..|.- ..++.|||++|+ ++..
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c-----~~~~~y~~~~Ss-~~~~----------------- 67 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQ-----SGHSVYNPSATG-KELS----------------- 67 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH-----TTSCCBCHHHHC-EEEE-----------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhc-----cCCCCCCcccCC-cccC-----------------
Confidence 467899999999 899999999999999999999986632 234799999999 6542
Q ss_pred CCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC---
Q 015184 152 CTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS--- 228 (411)
Q Consensus 152 c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~--- 228 (411)
.|.|.+.|++|+.+.|.+++|+|+|++.. ++++.|||++..++.+. .....+||||||++..
T Consensus 68 -----~~~~~i~Yg~Gs~~~G~~~~D~v~ig~~~--------v~~~~fg~~~~~~~~~~--~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 68 -----GYTWSISYGDGSSASGNVFTDSVTVGGVT--------AHGQAVQAAQQISAQFQ--QDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEECTTSCEEEEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TCTTCSEEEECSCGGGCCC
T ss_pred -----CCeEEEEeCCCCeEEEEEEEEEEEECCEE--------ECcEEEEEEEecCcccc--cCCCCceEEEeCccccccc
Confidence 47999999999977999999999998753 66899999998755432 2246799999998642
Q ss_pred ------cHHHHhhhcCCC-CCceEEeecCCCCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecCC
Q 015184 229 ------SMISQLASSGGV-RKMFAHCLDGINGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPT 297 (411)
Q Consensus 229 ------s~~~~l~~~g~i-~~~Fs~~l~~~~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~ 297 (411)
+++++|+++ | +++||+||.+ +..|.|+||++|+ +++.|+|+..+..+|.|.+++|+|++ ..
T Consensus 133 ~~~~~~~~~~~l~~~--i~~~~FS~~L~~-~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~---- 204 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS--LAQPLFAVALKH-QQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QS---- 204 (323)
T ss_dssp BSSCCCCHHHHHGGG--BSSSEEEEECCS-SSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EE----
T ss_pred ccCCCCCHHHHHHHh--cCCcEEEEEEeC-CCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-cc----
Confidence 589999987 6 4999999987 4689999999995 67999999767789999999999998 21
Q ss_pred ccccccCCCcEEEcccCceeecChHHHHHHHHHHHH-hCCCCcccccCCCCceeeecCCccccCceEEEEEcCCcEEEEC
Q 015184 298 DVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS-QQPDLKVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVY 376 (411)
Q Consensus 298 ~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~-~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~ 376 (411)
.....+||||||+++++|++++++|.+++.+ .... ....+.++|+ ..+|+|+|+| +|++|+||
T Consensus 205 -----~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~~~~---~~g~~~~~C~-------~~~P~i~f~f-gg~~~~l~ 268 (323)
T 1bxo_A 205 -----GDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS---NAGGYVFDCS-------TNLPDFSVSI-SGYTATVP 268 (323)
T ss_dssp -----EEEEEEEECTTCSSEEECHHHHHHHHTTSTTCEEET---TTTEEEECTT-------CCCCCEEEEE-TTEEEEEC
T ss_pred -----CCCceEEEeCCCCceeCCHHHHHHHHHhCCCceEcC---cCCEEEEECC-------CCCceEEEEE-CCEEEEEC
Confidence 1245699999999999999999999998843 2211 1112234673 4689999999 99999999
Q ss_pred CCeeeEEc--CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 377 PHEYLFPF--EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 377 ~~~yi~~~--~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+++|+++. +...|+ +|++.+ +.+.|||||+
T Consensus 269 ~~~~~~~~~~~~~~C~~~i~~~~-----~~~~~ILG~~ 301 (323)
T 1bxo_A 269 GSLINYGPSGDGSTCLGGIQSNS-----GIGFSIFGDI 301 (323)
T ss_dssp HHHHEEEECSSSSCEEESEEECT-----TCSSEEECHH
T ss_pred HHHeEEeccCCCCeEEEEEECCC-----CCCcEEEChH
Confidence 99999876 337898 576653 2368999974
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=4.8e-46 Score=357.01 Aligned_cols=265 Identities=20% Similarity=0.307 Sum_probs=213.0
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCCCCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCCCCCCCC
Q 015184 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC 152 (411)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~~~~~~c 152 (411)
+..|+++|+||||+|++.|+|||||+++||+|. +.|+|++|+++..
T Consensus 11 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~---------------~~y~~s~Ss~~~~------------------- 56 (340)
T 1wkr_A 11 LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD---------------KSYVKTSTSSATS------------------- 56 (340)
T ss_dssp SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS---------------SCCCCCTTCEEEE-------------------
T ss_pred CcEEEEEEEECCCCcEEEEEEeCCChhheecCC---------------CccCCcCCccccC-------------------
Confidence 568999999999999999999999999999863 4799998886543
Q ss_pred CCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCCCC----
Q 015184 153 TANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS---- 228 (411)
Q Consensus 153 ~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~---- 228 (411)
|.|.+.|++|+ ++|.+++|+|+|++.. ++++.|||++...+ + ..++||||||+...
T Consensus 57 -----~~~~i~Yg~Gs-~~G~~~~Dtv~~g~~~--------v~~~~fg~~~~~~~-~-----~~~~GilGLg~~~~s~~~ 116 (340)
T 1wkr_A 57 -----DKVSVTYGSGS-FSGTEYTDTVTLGSLT--------IPKQSIGVASRDSG-F-----DGVDGILGVGPVDLTVGT 116 (340)
T ss_dssp -----EEEEEECSSCE-EEEEEEEEEEEETTEE--------EEEEEEEEEEEEES-C-----TTCSEEEECSCGGGGTTS
T ss_pred -----ceEEEEECCcE-EEEEEEEEEEEECCEE--------EcceEEEEEEccCC-C-----cCCCcEEECCcccccccc
Confidence 78999999998 5999999999998743 67899999998754 3 14899999998653
Q ss_pred ----------cHHHHhhhcCCCC-CceEEeecCC----CCCceeeeCCcCC----CCceeecCcCC---CCceEEEEEEE
Q 015184 229 ----------SMISQLASSGGVR-KMFAHCLDGI----NGGGIFAIGHVVQ----PEVNKTPLVPN---QPHYSINMTAV 286 (411)
Q Consensus 229 ----------s~~~~l~~~g~i~-~~Fs~~l~~~----~~~G~l~fGg~d~----~~~~~~p~~~~---~~~w~v~l~~i 286 (411)
+++++|++||+|+ ++||+||.+. ...|.|+||++|+ +++.|+|+..+ ..+|.|. ++|
T Consensus 117 ~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i 195 (340)
T 1wkr_A 117 LSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSI 195 (340)
T ss_dssp EESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEE
T ss_pred ccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeE
Confidence 5799999999996 9999999863 3479999999996 67999999764 5789999 999
Q ss_pred EECC-EEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCCcccccCCCCceeeecCCccccCceEEE
Q 015184 287 QVGL-DFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDLKVHTVHDEYTCFQYSESVDEGFPNVTF 365 (411)
Q Consensus 287 ~v~g-~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f 365 (411)
+|++ +.+.. ...+||||||++++||++++++|.+++++.+... ...+.++| .....+|+|+|
T Consensus 196 ~v~~~~~l~~---------~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~---~g~~~~~C-----~~~~~~p~i~f 258 (340)
T 1wkr_A 196 RYGSSTSILS---------STAGIVDTGTTLTLIASDAFAKYKKATGAVADNN---TGLLRLTT-----AQYANLQSLFF 258 (340)
T ss_dssp EETTTEEEEE---------EEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT---TSSEEECH-----HHHHTCCCEEE
T ss_pred EECCCeEccC---------CCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC---CCeEEeec-----cccccCCcEEE
Confidence 9998 76631 2469999999999999999999998887654311 11122466 44456899999
Q ss_pred EEcCCcEEEECCCeeeEEcC--------CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 366 HFENSVSLKVYPHEYLFPFE--------DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 366 ~f~gg~~~~l~~~~yi~~~~--------~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+| +|++|+|++++|+++.. ...|+ +|.+....+.. .+.|||||+
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~-~~~~iLG~~ 311 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGE-GLDFINGLT 311 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTS-SCCEEECHH
T ss_pred EE-CCEEEEEcHHHhccccccccccCCCCceEEEEEecCCCCCCC-CcceEeChH
Confidence 99 89999999999998741 24685 77764432221 247999974
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-44 Score=327.38 Aligned_cols=217 Identities=28% Similarity=0.407 Sum_probs=185.1
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC---CCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCCC
Q 015184 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK---ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYG 146 (411)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~---~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~~ 146 (411)
++.+..|+++|+||||+|++.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 9 n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-------~~~y~~~~SsT~~~~~----------- 70 (239)
T 1b5f_A 9 NDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-------HSMYESSDSSTYKENG----------- 70 (239)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-------SCCBCGGGCTTCEEEE-----------
T ss_pred ecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-------CCCCCCccCCCeeeCC-----------
Confidence 567889999999999999999999999999999999986 4554 3689999999999854
Q ss_pred CCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEecccCCccccccCCceEEeeeecccCCCCCCCccccceeeecCCC
Q 015184 147 GPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKS 226 (411)
Q Consensus 147 ~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~ 226 (411)
+.|.+.|++|++ .|.+++|+|+|++.. ++++.|||+....+..+ ....++||||||++
T Consensus 71 -----------~~~~i~Yg~Gs~-~G~~~~D~v~~g~~~--------v~~~~fg~~~~~~~~~f--~~~~~~GilGLg~~ 128 (239)
T 1b5f_A 71 -----------TFGAIIYGTGSI-TGFFSQDSVTIGDLV--------VKEQDFIEATDEADNVF--LHRLFDGILGLSFQ 128 (239)
T ss_dssp -----------EEEEEECSSCEE-EEEEEEEEEEETTEE--------EEEEEEEEEEEECHHHH--TTCSCCEEEECSCC
T ss_pred -----------cEEEEEECCCcE-EEEEEEEEEEECCcE--------EccEEEEEEEeccCccc--cccCcceEEecCcc
Confidence 689999999985 999999999998743 66899999987653211 23467999999998
Q ss_pred CCc--HHHHhhhcCCCC-CceEEeecCC---CCCceeeeCCcCC----CCceeecCcCCCCceEEEEEEEEECCEEeecC
Q 015184 227 NSS--MISQLASSGGVR-KMFAHCLDGI---NGGGIFAIGHVVQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLP 296 (411)
Q Consensus 227 ~~s--~~~~l~~~g~i~-~~Fs~~l~~~---~~~G~l~fGg~d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~ 296 (411)
..+ ++++|++|++|+ ++||+||.+. ...|.|+||++|+ +++.|+|+. ...+|.|.+++|+|+++.+.+.
T Consensus 129 ~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~~~ 207 (239)
T 1b5f_A 129 TISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVT-YQYYWQFGIGDVLIGDKSTGFC 207 (239)
T ss_dssp SSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEE-EETTEEEEECCEEETTEECCTT
T ss_pred ccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcc-cCCeEEEEeeEEEECCEEeccc
Confidence 865 788999999996 9999999874 3579999999997 468899996 5679999999999999887543
Q ss_pred CccccccCCCcEEEcccCceeecChHHHHHHHHHHHH
Q 015184 297 TDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIIS 333 (411)
Q Consensus 297 ~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~ 333 (411)
. ....+||||||++++||++++++|.+++++
T Consensus 208 ~------~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 208 A------PGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp T------TCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred C------CCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 2 256799999999999999999999998864
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.97 E-value=5.6e-31 Score=240.04 Aligned_cols=198 Identities=18% Similarity=0.298 Sum_probs=157.4
Q ss_pred cCCceEEeeeecccCCCCCCCccccceeeecCCCCC------cHHHHhhhcCCCC-CceEEeecCCC-C--CceeeeCCc
Q 015184 193 TNGSLIFGCGARQSGNLDSTNEEALDGIIGFGKSNS------SMISQLASSGGVR-KMFAHCLDGIN-G--GGIFAIGHV 262 (411)
Q Consensus 193 ~~~~~~Fg~~~~~~~~~~~~~~~~~dGIlGLg~~~~------s~~~~l~~~g~i~-~~Fs~~l~~~~-~--~G~l~fGg~ 262 (411)
.++++.|||++...+.++ .....+||||||++.. +++++|++||+|+ ++||+||.+.. . +|.|+||++
T Consensus 4 ~v~~~~Fg~~~~~~~~~f--~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 4 KVERQVFGEATKQPGITF--IAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp EEEEEEEEEEEECCSSTT--TSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred EECCeEEEEEEEccCCcc--ccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 367899999998766432 4567899999999753 5899999999996 99999998852 2 799999999
Q ss_pred CC----CCceeecCcCCCCceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHHHHHHHHhCCCC
Q 015184 263 VQ----PEVNKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPLVSKIISQQPDL 338 (411)
Q Consensus 263 d~----~~~~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i~~~~~~~~~~~ 338 (411)
|+ +++.|+|+. ++.+|.|.+++|+|+++.+. ......+||||||+++++|++++++|.+++++....
T Consensus 82 d~~~~~g~l~~~p~~-~~~~~~v~l~~i~v~~~~~~-------~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~- 152 (241)
T 1lya_B 82 DSKYYKGSLSYLNVT-RKAYWQVHLDQVEVASGLTL-------CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI- 152 (241)
T ss_dssp CGGGEEEEEEEEECS-SBTTBEEEEEEEEETTSCEE-------STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-
T ss_pred CHHHcCCceEEEECc-cccEEEEEEeEEEECCeeEe-------ccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc-
Confidence 97 568999996 56899999999999987642 223567999999999999999999999999655321
Q ss_pred cccccCCCCceeeecCCccccCceEEEEEcCCcEEEECCCeeeEEcC---CEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 339 KVHTVHDEYTCFQYSESVDEGFPNVTFHFENSVSLKVYPHEYLFPFE---DLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 339 ~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~yi~~~~---~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
...+.++| +....+|+|+|+| +|++++||+++|+++.. +..|+ +|++.+..+. ..+.|||||+
T Consensus 153 ---~g~~~~~C-----~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~-~~~~~ilG~~ 219 (241)
T 1lya_B 153 ---QGEYMIPC-----EKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPP-SGPLWILGDV 219 (241)
T ss_dssp ---TTEEEEEG-----GGGGGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTT-TCCCEEECHH
T ss_pred ---CCcEEEEC-----CCCccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCC-CCCeEEechH
Confidence 12223466 4445799999999 89999999999999872 56898 7887654322 2368999974
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=8.5e-24 Score=163.08 Aligned_cols=84 Identities=39% Similarity=0.584 Sum_probs=75.8
Q ss_pred CCCcccEEEEEEeCCCCceEEEEEECCCCceeEeCCCCC----CCCCcCCCCCcCccCCCCCCCCCceecCCCcccCCCC
Q 015184 70 PDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCK----ECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVY 145 (411)
Q Consensus 70 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C~----~C~~~~~~~~~~~~y~~~~Sst~~~~~c~~~~C~~~~ 145 (411)
++.+..|+++|.||||+|+|.|+|||||+++||+|..|. .|.. ++.|||++|+|++..+
T Consensus 9 n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-------~~~y~p~~SsT~~~~~---------- 71 (97)
T 1lya_A 9 NYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-------HHKYNSDKSSTYVKNG---------- 71 (97)
T ss_dssp EETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-------SCCBCGGGCTTCEEEE----------
T ss_pred ECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-------CCCCCchhCCCceeCC----------
Confidence 567889999999999999999999999999999999886 4654 3789999999999865
Q ss_pred CCCCCCCCCCCCCCceeeeCCCCeeeeeEEEEEEEEec
Q 015184 146 GGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDK 183 (411)
Q Consensus 146 ~~~~~~c~~~~~~~~~~~Y~~g~~~~G~~~~D~v~i~~ 183 (411)
|.|.+.|++|+ +.|.+++|+|+|++
T Consensus 72 ------------~~~~i~Yg~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 ------------TSFDIHYGSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ------------EEEEEECSSCE-EEEEEEEEEEEESC
T ss_pred ------------CcEEEEECCcE-EEEEEEEEEEEECC
Confidence 78999999999 59999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=98.64 E-value=1.5e-08 Score=75.99 Aligned_cols=54 Identities=24% Similarity=0.476 Sum_probs=42.8
Q ss_pred CccccCceEEEEEcCCcEEEECCCeeeEEc---CCEEEE-EEEeCCCCCCCCCCeeeecCC
Q 015184 355 SVDEGFPNVTFHFENSVSLKVYPHEYLFPF---EDLWCI-GWQNSGMQSRDRKNMTLLGDF 411 (411)
Q Consensus 355 ~~~~~~P~i~f~f~gg~~~~l~~~~yi~~~---~~~~C~-~~~~~~~~~~~~~~~~ILGdv 411 (411)
+....+|+|+|+| +|++++|+|++|+++. +...|+ +|++.+.. ...+.|||||+
T Consensus 8 ~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~--~~~~~~ILGd~ 65 (87)
T 1b5f_B 8 NTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT--LLGPLWILGDV 65 (87)
T ss_dssp GGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCB--SSSBEEEECHH
T ss_pred CCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC--CCCCeEEechH
Confidence 5556799999999 8999999999999986 246898 78876543 12368999984
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.88 E-value=0.89 Score=33.94 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=24.4
Q ss_pred EEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 015184 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (411)
Q Consensus 77 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (411)
++.|.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~~ 37 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEMS 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCCS
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEeccc
Confidence 5689999 799999999999999997543
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.35 E-value=0.83 Score=34.51 Aligned_cols=27 Identities=22% Similarity=0.179 Sum_probs=24.0
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeC
Q 015184 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (411)
Q Consensus 76 Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (411)
-++.|.|| +|.+++++|||.+++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 36789999 7999999999999999973
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=83.61 E-value=0.99 Score=36.34 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=27.3
Q ss_pred CCcccEEEEEEeCCCCceEEEEEECCCCceeEeC
Q 015184 71 DGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNC 104 (411)
Q Consensus 71 ~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 104 (411)
...+.+++++.|+ ++++++++|||++.+-+..
T Consensus 22 ~~~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 22 TQVPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp -CCCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cccceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 3467799999998 7899999999999998864
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=82.95 E-value=1.4 Score=32.77 Aligned_cols=28 Identities=29% Similarity=0.191 Sum_probs=24.3
Q ss_pred EEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 015184 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (411)
Q Consensus 77 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (411)
++.+.|| +|.+++++|||.+++-+...+
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~~ 37 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGIE 37 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSCC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCcc
Confidence 5679999 799999999999999996543
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=79.54 E-value=1.6 Score=33.29 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=25.7
Q ss_pred EEEEEeC---CCCceEEEEEECCCCceeEeCCCC
Q 015184 77 YAKIGIG---TPPKDYYVQVDTGSDIMWVNCIQC 107 (411)
Q Consensus 77 ~~~i~iG---tP~q~~~v~~DTGS~~~Wv~~~~C 107 (411)
.+.|.|| +|+|.+..++|||-+++-+...++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~l 45 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALF 45 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGS
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccC
Confidence 4566666 789999999999999999987654
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=78.55 E-value=2.3 Score=34.10 Aligned_cols=29 Identities=7% Similarity=0.212 Sum_probs=24.2
Q ss_pred EEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHH
Q 015184 286 VQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (411)
Q Consensus 286 i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i 327 (411)
+.+||+.+. ++||||++.+.++.+..+++
T Consensus 31 v~InG~~~~-------------~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 31 IEINNYPVK-------------AFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp EEETTEEEE-------------EEECTTCSSCEEEHHHHHHH
T ss_pred EEECCEEEE-------------EEEECCCCccccCHHHHHHc
Confidence 678888764 89999999999998877654
No 44
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=78.42 E-value=1.7 Score=35.19 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=27.0
Q ss_pred ceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHHHHH
Q 015184 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVYEPL 327 (411)
Q Consensus 278 ~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~~~i 327 (411)
.++++ +.|||+.+. ++||||++.+.++.+.++++
T Consensus 24 ~l~v~---~~Ing~~v~-------------~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK-------------AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEEE-------------EEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEEE-------------EEEeCCCCcEeeCHHHHHHc
Confidence 44444 457888774 99999999999999988766
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=76.26 E-value=2.4 Score=32.62 Aligned_cols=26 Identities=27% Similarity=0.193 Sum_probs=22.9
Q ss_pred EEEEEeCCCCceEEEEEECCCCceeEeCC
Q 015184 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (411)
Q Consensus 77 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 105 (411)
++ |.|| +|.+++++|||.+++-+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 45 9999 79999999999999999753
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=76.26 E-value=2.2 Score=34.44 Aligned_cols=32 Identities=16% Similarity=0.257 Sum_probs=27.2
Q ss_pred CcccEEEEEEeCCCCceEEEEEECCCCceeEeCC
Q 015184 72 GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (411)
Q Consensus 72 ~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 105 (411)
....|++++.|. +++++++||||++.+.+...
T Consensus 21 ~~~~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 21 QVTMLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp -CCCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ccCEEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 345689999998 79999999999999999764
No 47
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=71.16 E-value=4 Score=31.15 Aligned_cols=29 Identities=14% Similarity=0.197 Sum_probs=25.1
Q ss_pred EEEEEeCCCCceEEEEEECCCCceeEeCCCC
Q 015184 77 YAKIGIGTPPKDYYVQVDTGSDIMWVNCIQC 107 (411)
Q Consensus 77 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~C 107 (411)
.+.+.|| +|.++.++|||-+++-+...+.
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~~l 39 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLEDW 39 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGGGS
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecccC
Confidence 5689999 7999999999999999986543
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=65.53 E-value=7.2 Score=30.67 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=26.5
Q ss_pred cccEEEEEEeCCCCceEEEEEECCCCceeEeCCC
Q 015184 73 VGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQ 106 (411)
Q Consensus 73 ~~~Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (411)
...-++.+.|+ +|.+.+++|||.+++-+...+
T Consensus 20 ~~RP~v~i~I~--G~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 20 PPEPRITLKVG--GQPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CCSSEEEEEET--TEEEEEEECTTCSSCEECSCC
T ss_pred cCCCEEEEEEC--CEEEEEEEeCCCCeEEEcccc
Confidence 34457789999 799999999999999997543
No 49
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=57.47 E-value=10 Score=32.20 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.5
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeCC
Q 015184 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (411)
Q Consensus 76 Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 105 (411)
-.+.|.|| +|.+++++|||.+++-+...
T Consensus 9 P~vtv~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (203)
T 3ka2_A 9 PLVTIRIG--GQLKEALLDTGADDTVIEEL 36 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CeEEEEEC--CEEEEEEEecCCCceEEecc
Confidence 36789999 79999999999999999643
No 50
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=56.99 E-value=10 Score=29.37 Aligned_cols=23 Identities=17% Similarity=0.148 Sum_probs=19.6
Q ss_pred eCCCCceEEEEEECCCCceeEeCCC
Q 015184 82 IGTPPKDYYVQVDTGSDIMWVNCIQ 106 (411)
Q Consensus 82 iGtP~q~~~v~~DTGS~~~Wv~~~~ 106 (411)
|| +|.++.++|||-+++-+...+
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~~ 49 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEED 49 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETTT
T ss_pred CC--CEEEEEEecCCCCcEEEeccc
Confidence 55 688899999999999998654
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=56.32 E-value=10 Score=27.84 Aligned_cols=15 Identities=20% Similarity=0.709 Sum_probs=13.9
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 30 VVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCCceEEeEc
Confidence 899999999999965
No 52
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=41.48 E-value=16 Score=27.27 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=25.4
Q ss_pred eEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHH
Q 015184 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (411)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~ 324 (411)
|.=.+..+.|+|+... +++|||+-.+.+.....
T Consensus 6 ~~RP~v~v~I~Gq~~e-------------~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------------VLLDTGADTSVLTTAHY 38 (104)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEEEHHHH
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEccccC
Confidence 3334556889998763 99999999999987665
No 53
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=40.34 E-value=26 Score=27.45 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=21.8
Q ss_pred EEEEEECCEEeecCCccccccCCCcEEEcccCceeecChH
Q 015184 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (411)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~ 322 (411)
+..+.++|+.+. +++|||+..+.|+..
T Consensus 24 ~v~i~I~G~~~~-------------~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 24 RITLKVGGQPVT-------------FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEECSC
T ss_pred EEEEEECCEEEE-------------EEEeCCCCeEEEccc
Confidence 345888888764 899999999999864
No 54
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=39.96 E-value=19 Score=26.66 Aligned_cols=30 Identities=13% Similarity=0.416 Sum_probs=23.5
Q ss_pred eEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecCh
Q 015184 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (411)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~ 321 (411)
|+=.+..+.++|+... +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------------EEeccCCCcEEEec
Confidence 3335566889998774 99999999988875
No 55
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=36.11 E-value=22 Score=26.25 Aligned_cols=29 Identities=7% Similarity=0.194 Sum_probs=22.8
Q ss_pred eEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecC
Q 015184 279 YSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLP 320 (411)
Q Consensus 279 w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp 320 (411)
|.=.+..+.++|+... +++|||+-.+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------------EEEecCCCceEEc
Confidence 4445667899999874 9999999888873
No 56
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=35.38 E-value=26 Score=26.76 Aligned_cols=30 Identities=13% Similarity=0.192 Sum_probs=24.6
Q ss_pred ceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecCh
Q 015184 278 HYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (411)
Q Consensus 278 ~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~ 321 (411)
.|+=.+. +.++|+... +++|||+-.+.+..
T Consensus 11 l~~rP~v-ikI~Gq~~e-------------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------------EEecCCCCcEEEcc
Confidence 4665677 999999874 99999999888875
No 57
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=34.58 E-value=42 Score=28.33 Aligned_cols=28 Identities=25% Similarity=0.222 Sum_probs=24.3
Q ss_pred EEEEEEeCCCCceEEEEEECCCCceeEeCC
Q 015184 76 YYAKIGIGTPPKDYYVQVDTGSDIMWVNCI 105 (411)
Q Consensus 76 Y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 105 (411)
=.+.+.|| +|.++.++|||.+++-+...
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~~ 140 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEEL 140 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeecc
Confidence 36789999 79999999999999999643
No 58
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=32.67 E-value=32 Score=31.32 Aligned_cols=37 Identities=24% Similarity=0.498 Sum_probs=24.5
Q ss_pred ecCcCCCCceEEEEEEEEEC--CEEeecCCccccccCCCcEEEcccCceeecChH
Q 015184 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (411)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~ 322 (411)
+|+......|.++ |.|| .+.+ .+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~q~~-------------~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 5 TTLINEGPSYAAD---IVVGSNQQKQ-------------TVVIDTGSSDLWVVDT 43 (334)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEE-------------EEEEETTCCCEEEEEE
T ss_pred EEEecCCcEEEEE---EEEcCCCcEE-------------EEEEcCCCCCEEEecC
Confidence 3444344456654 6676 3443 3899999999999854
No 59
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=32.62 E-value=32 Score=31.33 Aligned_cols=37 Identities=27% Similarity=0.456 Sum_probs=24.9
Q ss_pred ecCcCCCCceEEEEEEEEEC--CEEeecCCccccccCCCcEEEcccCceeecChH
Q 015184 270 TPLVPNQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (411)
Q Consensus 270 ~p~~~~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~ 322 (411)
+|+.....+|.++ |.|| .+.+ .+++|||++.+++|..
T Consensus 5 ~~l~~~~~~Y~~~---i~iGtP~Q~~-------------~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 5 LSLINEGPSYASK---VSVGSNKQQQ-------------TVIIDTGSSDFWVVDS 43 (339)
T ss_dssp EEEEECSSSEEEE---EEETTTTEEE-------------EEEEETTCCCEEEEEE
T ss_pred eEEEcCCCEEEEE---EEEcCCCcEE-------------EEEEeCCCCceEEecC
Confidence 4554444566654 6676 3443 3899999999999854
No 60
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=31.40 E-value=37 Score=30.98 Aligned_cols=15 Identities=20% Similarity=0.479 Sum_probs=13.6
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
++||||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (340)
T 1wkr_A 29 LLVDTGSSNTWLGAD 43 (340)
T ss_dssp EEEETTCCCCEECSS
T ss_pred EEEeCCChhheecCC
Confidence 999999999999863
No 61
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=30.35 E-value=37 Score=31.01 Aligned_cols=15 Identities=27% Similarity=0.744 Sum_probs=13.5
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
++||||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 29 VIVDTGSSDLWIPDS 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEeCCCCCeEEecC
Confidence 899999999999854
No 62
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=29.70 E-value=43 Score=30.35 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=27.1
Q ss_pred eeecCcCCCCceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHH
Q 015184 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (411)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~ 324 (411)
...|+. ....|.+ .|+||.+.+. +++|||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1bxo_A 7 TNTPTA-NDEEYIT---PVTIGGTTLN-------------LNFDTGSADLWVFSTEL 46 (323)
T ss_dssp EEEECG-GGSCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeecC-CCCEEEE---EEEECCEEEE-------------EEEeCCCcceEEecCCC
Confidence 344543 3455654 4677755543 89999999999997543
No 63
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=28.53 E-value=46 Score=30.15 Aligned_cols=40 Identities=25% Similarity=0.298 Sum_probs=26.9
Q ss_pred eeecCcCCCCceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHH
Q 015184 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (411)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~ 324 (411)
...|+. ....|.+ .|.||.+.+. ++||||++.+++|..-.
T Consensus 7 ~~~~~~-~~~~Y~~---~i~iG~q~~~-------------v~~DTGSs~lWv~~~~C 46 (323)
T 1izd_A 7 TTNPTS-NDEEYIT---QVTVGDDTLG-------------LDFDTGSADLWVFSSQT 46 (323)
T ss_dssp EEEECG-GGCCEEE---EEEETTEEEE-------------EEEETTCCCEEECBTTS
T ss_pred eeeEcC-CCCEEEE---EEEECCEEEE-------------EEEcCCCcceEEecCCC
Confidence 344543 4455654 4677755542 89999999999997643
No 64
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=26.66 E-value=47 Score=30.21 Aligned_cols=15 Identities=27% Similarity=0.789 Sum_probs=13.5
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 29 VIVDTGSSDLWVPDV 43 (342)
T ss_dssp EEEETTCCCEEEEEE
T ss_pred EEEECCCcceEEEcC
Confidence 899999999999854
No 65
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=26.56 E-value=46 Score=30.25 Aligned_cols=30 Identities=17% Similarity=0.208 Sum_probs=22.4
Q ss_pred CceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChH
Q 015184 277 PHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEM 322 (411)
Q Consensus 277 ~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~ 322 (411)
..|.++ |+||.+.+. +++|||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQNFL-------------TVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTEEEE-------------EEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCEEEE-------------EEEeCCCcceEEecC
Confidence 456554 677755543 899999999999964
No 66
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=26.22 E-value=47 Score=30.11 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=27.1
Q ss_pred eeecCcCCCCceEEEEEEEEECCEEeecCCccccccCCCcEEEcccCceeecChHHH
Q 015184 268 NKTPLVPNQPHYSINMTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (411)
Q Consensus 268 ~~~p~~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~ 324 (411)
...|+. ....|.++ |.||.+.+. +++|||++.+++|..-.
T Consensus 6 ~~~~~~-~~~~Y~~~---i~iG~Q~~~-------------v~~DTGSs~lWv~~~~C 45 (325)
T 1ibq_A 6 VTTPQN-NDEEYLTP---VTVGKSTLH-------------LDFDTGSADLWVFSDEL 45 (325)
T ss_dssp EEEECT-TTSCEEEE---EEEBTEEEE-------------EEEETTCCCEEEECTTS
T ss_pred EeEEcC-CCCEEEEE---EEECCEEEE-------------EEEeCCCccceEeeCCC
Confidence 344542 44566554 667755543 89999999999997543
No 67
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=24.52 E-value=56 Score=28.08 Aligned_cols=15 Identities=27% Similarity=0.749 Sum_probs=13.8
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
++||||++.+++|..
T Consensus 30 v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 30 VIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEeCCCcceEEEcC
Confidence 899999999999864
No 68
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=23.17 E-value=73 Score=28.78 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=13.9
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
+++|||++.+++|..
T Consensus 29 v~~DTGSs~lWv~~~ 43 (329)
T 1htr_B 29 VLFDTGSSNLWVPSV 43 (329)
T ss_dssp EEEETTCCCEEEEBT
T ss_pred EEEcCCCccEEEecC
Confidence 899999999999875
No 69
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=22.65 E-value=73 Score=24.14 Aligned_cols=26 Identities=8% Similarity=0.222 Sum_probs=20.9
Q ss_pred EEEEEECCEEeecCCccccccCCCcEEEcccCceeecCh
Q 015184 283 MTAVQVGLDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPE 321 (411)
Q Consensus 283 l~~i~v~g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~ 321 (411)
+..+.++|+... +++|||+-.+.+..
T Consensus 11 ~vti~I~Gq~~e-------------aLLDTGADdTVi~~ 36 (114)
T 3sqf_A 11 SLTLWLDDKMFT-------------GLINTGADVTIIKL 36 (114)
T ss_dssp EEEEEETTEEEE-------------EEECTTCSSCEEEG
T ss_pred eEEEEECCEEEE-------------EEEccCCCceEEec
Confidence 455888888774 99999998888764
No 70
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.12 E-value=71 Score=28.90 Aligned_cols=34 Identities=18% Similarity=0.266 Sum_probs=24.0
Q ss_pred CCCceEEEEEEEEEC--CEEeecCCccccccCCCcEEEcccCceeecChHHH
Q 015184 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMVY 324 (411)
Q Consensus 275 ~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~~ 324 (411)
....|.+ .|.|| .+.+ .+++|||++.+++|..-.
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~-------------~v~~DTGSs~lWv~~~~C 48 (329)
T 3c9x_A 13 ADSEYIT---SVSIGTPAQVL-------------PLDFDTGSSDLWVFSSET 48 (329)
T ss_dssp TCCCEEE---EEEETTTTEEE-------------EEEEETTCCCEEECBTTS
T ss_pred CCCEEEE---EEEECCCCeEE-------------EEEEcCCCCCeEEecCCC
Confidence 4455654 47777 4444 389999999999997543
No 71
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=21.49 E-value=75 Score=28.76 Aligned_cols=33 Identities=21% Similarity=0.257 Sum_probs=23.7
Q ss_pred CCCceEEEEEEEEEC--CEEeecCCccccccCCCcEEEcccCceeecChHH
Q 015184 275 NQPHYSINMTAVQVG--LDFLNLPTDVFGVGDNKGTIIDSGTTLAYLPEMV 323 (411)
Q Consensus 275 ~~~~w~v~l~~i~v~--g~~~~~~~~~~~~~~~~~aiiDTGts~~~lp~~~ 323 (411)
....|.+ .|.|| .+.+ .+++|||++.+++|..-
T Consensus 13 ~~~~Y~~---~i~iGTP~Q~~-------------~v~~DTGSs~lWv~~~~ 47 (329)
T 1oew_A 13 LDDAYIT---PVQIGTPAQTL-------------NLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp TCCCEEE---EEEETTTTEEE-------------EEEEETTCCCEEECBTT
T ss_pred CCCEEEE---EEEECCCCeEE-------------EEEECCCCCCeEEecCC
Confidence 4455654 47777 4444 38999999999999753
No 72
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=20.53 E-value=67 Score=29.02 Aligned_cols=15 Identities=13% Similarity=0.297 Sum_probs=13.8
Q ss_pred EEEcccCceeecChH
Q 015184 308 TIIDSGTTLAYLPEM 322 (411)
Q Consensus 308 aiiDTGts~~~lp~~ 322 (411)
+++|||++.+++|..
T Consensus 32 v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 32 LDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEETTCCCCEEEBT
T ss_pred EEEcCCCCCEEEccC
Confidence 899999999999865
No 73
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=20.44 E-value=83 Score=26.83 Aligned_cols=32 Identities=16% Similarity=0.228 Sum_probs=23.7
Q ss_pred ccEEE---EEEeCCC----CceEEEEEECCCCceeEeCC
Q 015184 74 GLYYA---KIGIGTP----PKDYYVQVDTGSDIMWVNCI 105 (411)
Q Consensus 74 ~~Y~~---~i~iGtP----~q~~~v~~DTGS~~~Wv~~~ 105 (411)
..|.+ .|.||.- .....+++|||++.+++|..
T Consensus 99 ~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~ 137 (241)
T 1lya_B 99 AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVD 137 (241)
T ss_dssp TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHH
T ss_pred cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHH
Confidence 45655 5678752 34578999999999999874
Done!