Query 015189
Match_columns 411
No_of_seqs 206 out of 1704
Neff 7.0
Searched_HMMs 13730
Date Mon Mar 25 08:15:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015189.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015189hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1otsa_ f.20.1.1 (A:) Clc chlo 5.6 2.6E+02 0.019 25.1 4.7 39 348-386 380-419 (444)
2 d1ut3a_ g.9.1.1 (A:) Beta-defe 5.1 82 0.006 18.2 0.3 18 34-51 12-29 (38)
3 d2crna1 a.5.2.1 (A:8-58) Suppr 4.2 3.5E+02 0.025 16.6 3.2 34 337-370 12-45 (51)
4 d3dtub2 f.17.2.1 (B:30-129) Ba 3.6 5.7E+02 0.042 17.5 4.5 16 386-401 44-59 (100)
5 d2e74d2 f.23.12.1 (D:12-45) IS 3.0 4.9E+02 0.036 14.6 2.8 20 74-93 8-27 (34)
6 d1oedb_ f.36.1.1 (B:) Acetylch 2.5 3.5E+02 0.026 21.5 2.3 21 63-83 209-229 (250)
7 d1whca_ a.5.2.1 (A:) UBA/UBX 3 2.4 6.6E+02 0.048 15.9 3.2 34 337-370 19-52 (64)
8 d1fftb2 f.17.2.1 (B:27-117) Cy 2.3 3.7E+02 0.027 18.4 1.9 8 392-399 39-46 (91)
9 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 2.0 4.2E+02 0.03 16.3 1.6 24 337-360 22-45 (51)
10 d1pw4a_ f.38.1.1 (A:) Glycerol 2.0 1.5E+03 0.11 17.9 13.5 11 217-227 275-285 (447)
No 1
>d1otsa_ f.20.1.1 (A:) Clc chloride channel {Escherichia coli [TaxId: 562]}
Probab=5.60 E-value=2.6e+02 Score=25.07 Aligned_cols=39 Identities=10% Similarity=0.200 Sum_probs=22.6
Q ss_pred hhhhhcchhHHH-HHHHHHhcCCccchHHHHHHHHHHHHH
Q 015189 348 SIEVGMQNSSLG-VVLATAHFTSSMVALPPAMSAVIMNIM 386 (411)
Q Consensus 348 ~~~~g~rN~~La-i~la~~~f~~p~~alp~~i~~l~q~i~ 386 (411)
++-+|.-|.+++ +.+.....++....+|.++..+.-..+
T Consensus 380 a~~a~~~~~Plta~vl~~Eltg~~~~~~p~~ia~~~a~~v 419 (444)
T d1otsa_ 380 ALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLL 419 (444)
T ss_dssp HHHHHTSCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 344566666544 455556676667777766655544443
No 2
>d1ut3a_ g.9.1.1 (A:) Beta-defensin, BD {King penguin (Aptenodytes patagonicus), spheniscin-2 [TaxId: 9234]}
Probab=5.06 E-value=82 Score=18.17 Aligned_cols=18 Identities=22% Similarity=0.451 Sum_probs=12.8
Q ss_pred ccCCCCCCCCcccccccc
Q 015189 34 ISSSPPSFKNLQITRCVN 51 (411)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~ 51 (411)
|+.+--.|..+|+++|..
T Consensus 12 cargrcrfpsipigrcsr 29 (38)
T d1ut3a_ 12 CARGRCRFPSIPIGRCSR 29 (38)
T ss_dssp EESSSCCTTEEEEEESSS
T ss_pred cccccccCCCcchhHHHH
Confidence 455555677889998864
No 3
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.19 E-value=3.5e+02 Score=16.65 Aligned_cols=34 Identities=12% Similarity=0.140 Sum_probs=23.5
Q ss_pred hCCCccchhhhhhhhhcchhHHHHHHHHHhcCCc
Q 015189 337 CGFKEPQRRAISIEVGMQNSSLGVVLATAHFTSS 370 (411)
Q Consensus 337 lg~~~~~~~al~~~~g~rN~~Lai~la~~~f~~p 370 (411)
.|++++.++-..+.+|.+|..-|+--...+..+|
T Consensus 12 MGF~~~~a~~Al~~t~n~~ve~A~~Wl~~h~~d~ 45 (51)
T d2crna1 12 MGFPVHTALKALAATGRKTAEEALAWLHDHCNDP 45 (51)
T ss_dssp TSCCHHHHHHHHHHHTSCCHHHHHHHHHHHSSST
T ss_pred cCCCHHHHHHHHHHHCCCCHHHHHHHHHHcCCCc
Confidence 4788877776667778888877775555565554
No 4
>d3dtub2 f.17.2.1 (B:30-129) Bacterial aa3 type cytochrome c oxidase subunit II {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=3.65 E-value=5.7e+02 Score=17.48 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=7.6
Q ss_pred HHHHHHHHhhccCCCC
Q 015189 386 MGSTLGFFWRYIDPSD 401 (411)
Q Consensus 386 ~~~~~a~~~~~~~~~~ 401 (411)
.+......||+|++++
T Consensus 44 ~~~l~~~~~~~r~~~~ 59 (100)
T d3dtub2 44 TLLILYAVWRFHEKRN 59 (100)
T ss_dssp HHHHHHHHHHHBTTTC
T ss_pred HHHHHHHhhhhhccCC
Confidence 3444444566555443
No 5
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=2.98 E-value=4.9e+02 Score=14.56 Aligned_cols=20 Identities=20% Similarity=0.287 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHhhccc
Q 015189 74 ASLYPLYVTVGGVIACLKPS 93 (411)
Q Consensus 74 ~~~~p~~i~~~~llgl~~P~ 93 (411)
-+++.+--+.|..+|-++|.
T Consensus 8 mnlltfgt~tg~alg~lypv 27 (34)
T d2e74d2 8 MNLLAFGTVTGVALGALYPL 27 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHhhhhhH
Confidence 44566677778888877774
No 6
>d1oedb_ f.36.1.1 (B:) Acetylcholine receptor protein, beta chain {Marbled electric ray (Torpedo marmorata) [TaxId: 7788]}
Probab=2.52 E-value=3.5e+02 Score=21.53 Aligned_cols=21 Identities=29% Similarity=0.542 Sum_probs=8.5
Q ss_pred hhHHHHHHHHHhhHHHHHHHH
Q 015189 63 KPRWEYLLSTAASLYPLYVTV 83 (411)
Q Consensus 63 ~~~~~~~l~~~~~~~p~~i~~ 83 (411)
+++|+..-..+||.+.+..++
T Consensus 209 ~~EW~~vA~VlDRlfl~lF~l 229 (250)
T d1oedb_ 209 KKDWQYVAMVADRLFLYVFFV 229 (250)
T ss_dssp -------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356877777778766544333
No 7
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=2.39 E-value=6.6e+02 Score=15.91 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=22.7
Q ss_pred hCCCccchhhhhhhhhcchhHHHHHHHHHhcCCc
Q 015189 337 CGFKEPQRRAISIEVGMQNSSLGVVLATAHFTSS 370 (411)
Q Consensus 337 lg~~~~~~~al~~~~g~rN~~Lai~la~~~f~~p 370 (411)
.|++++.++-..+.++.+|..-|+--...+..++
T Consensus 19 MGF~~~~a~~AL~~t~n~~~e~A~~Wl~~h~~d~ 52 (64)
T d1whca_ 19 MGFPRGRAEKALALTGNQGIEAAMDWLMEHEDDP 52 (64)
T ss_dssp TTCCHHHHHHHHHHHTSCCHHHHHHHHHHHTTCS
T ss_pred cCCCHHHHHHHHHHhCCCCHHHHHHHHHHCCCCC
Confidence 4778877666666677778877775555565543
No 8
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit II {Escherichia coli [TaxId: 562]}
Probab=2.33 E-value=3.7e+02 Score=18.39 Aligned_cols=8 Identities=38% Similarity=1.128 Sum_probs=3.4
Q ss_pred HHhhccCC
Q 015189 392 FFWRYIDP 399 (411)
Q Consensus 392 ~~~~~~~~ 399 (411)
..||.|++
T Consensus 39 ~~~ryR~~ 46 (91)
T d1fftb2 39 FAWKYRAS 46 (91)
T ss_dssp TTTTTTTS
T ss_pred hheeeecc
Confidence 34554433
No 9
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.03 E-value=4.2e+02 Score=16.33 Aligned_cols=24 Identities=13% Similarity=0.213 Sum_probs=16.1
Q ss_pred hCCCccchhhhhhhhhcchhHHHH
Q 015189 337 CGFKEPQRRAISIEVGMQNSSLGV 360 (411)
Q Consensus 337 lg~~~~~~~al~~~~g~rN~~Lai 360 (411)
.|+++++++-....|+.+|..-|+
T Consensus 22 MGF~~~~a~~AL~~t~n~~ve~A~ 45 (51)
T d2cpwa1 22 MGFPRARAQKALASTGGRSVQTAC 45 (51)
T ss_dssp HTCCHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCCHHHHHHHHHHHCCCCHHHHH
Confidence 377887777666667766665554
No 10
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]}
Probab=1.98 E-value=1.5e+03 Score=17.88 Aligned_cols=11 Identities=0% Similarity=-0.318 Sum_probs=4.4
Q ss_pred HhCcccccChH
Q 015189 217 LAGTYVPVDAV 227 (411)
Q Consensus 217 l~g~~v~vd~~ 227 (411)
+..+..+.|..
T Consensus 275 ~~~~~~~~~~~ 285 (447)
T d1pw4a_ 275 YLKEVKHFALD 285 (447)
T ss_dssp HBTTBSCCCHH
T ss_pred hcccccccccc
Confidence 33333344443
Done!