Query 015193
Match_columns 411
No_of_seqs 166 out of 1063
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 08:19:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015193.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015193hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dj2_A Adenylosuccinate synthe 100.0 5E-162 2E-166 1231.0 34.9 410 2-411 34-443 (443)
2 3hid_A Adenylosuccinate synthe 100.0 1E-160 3E-165 1221.3 29.6 409 2-411 17-426 (432)
3 3ue9_A Adenylosuccinate synthe 100.0 8E-160 3E-164 1218.8 27.1 408 2-411 30-446 (452)
4 2v40_A Adenylosuccinate synthe 100.0 3E-159 9E-164 1214.0 29.6 405 2-411 46-458 (459)
5 1p9b_A Adenylosuccinate synthe 100.0 4E-158 1E-162 1200.6 33.0 401 2-410 29-435 (442)
6 3r7t_A Adenylosuccinate synthe 100.0 9E-158 3E-162 1194.4 29.1 399 2-411 20-419 (419)
7 2d7u_A Adenylosuccinate synthe 100.0 5E-133 2E-137 987.3 18.6 316 2-410 16-334 (339)
8 1uwk_A Urocanate hydratase; hy 33.8 1E+02 0.0034 32.3 7.8 163 49-222 96-276 (557)
9 1hyw_A GPW, head-TO-tail joini 32.5 1.1E+02 0.0036 23.3 5.9 42 319-395 16-57 (68)
10 2fkn_A Urocanate hydratase; ro 31.9 98 0.0034 32.3 7.4 162 49-222 92-272 (552)
11 3oig_A Enoyl-[acyl-carrier-pro 28.9 25 0.00086 31.9 2.3 39 114-152 14-53 (266)
12 3gdg_A Probable NADP-dependent 24.3 1.1E+02 0.0038 27.3 5.8 41 114-154 27-70 (267)
13 3o38_A Short chain dehydrogena 23.9 29 0.001 31.4 1.7 24 113-136 28-51 (266)
14 3mdq_A Exopolyphosphatase; str 22.6 39 0.0013 32.5 2.3 22 379-400 89-110 (315)
No 1
>1dj2_A Adenylosuccinate synthetase; GDP, ligase; HET: GDP; 2.90A {Arabidopsis thaliana} SCOP: c.37.1.10 PDB: 1dj3_A*
Probab=100.00 E-value=5.2e-162 Score=1231.00 Aligned_cols=410 Identities=84% Similarity=1.336 Sum_probs=402.8
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~~~ 81 (411)
|||+||+||..+|+|||||||+||||||++++|++|+|||||||+|+|+++|+|||||||||++|++||+.|+++|+++.
T Consensus 34 KGKivD~La~~~dvVvR~qGG~NAGHTVv~~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~L~~Ei~~L~~~G~~v~ 113 (443)
T 1dj2_A 34 KGKLVDILAQHFDIVARCQGGANAGHTIYNSEGKKFALHLVPSGILNEDTTCVIGNGVVVHLPGLFKEIDGLESNGVSCK 113 (443)
T ss_dssp HHHHHHHHGGGCSEEEECSCCTTCCEEEECSSCCEEEESSSCGGGGSTTCEEEECTTCEECHHHHHHHHHHHHTTTCCCT
T ss_pred CceEEeeeccCCCEEEecCccCCCCcEEEEeCCEEEEEEccCccccCCCceEEECCcEEEcHHHHHHHHHHHHHcCCCCC
Confidence 89999999999999999999999999999889999999999999999999999999999999999999999999998777
Q ss_pred CceEEeCCceecchhHHHhhHHHHHHhcCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhccC
Q 015193 82 GRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPG 161 (411)
Q Consensus 82 ~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~ 161 (411)
+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|+||||+||+|++.|++||+.+++++|.++..
T Consensus 114 ~rL~Is~rahli~p~H~~lD~~~E~~~g~~~IGTTgrGIGPaY~dK~~R~giRv~DL~d~~~~~~kl~~~~~~~~~~l~~ 193 (443)
T 1dj2_A 114 GRILVSDRAHLLFDFHQEVDGLRESELAKSFIGTTKRGIGPAYSSKVIRNGIRVGDLRHMDTLPQKLDLLLSDAAARFQG 193 (443)
T ss_dssp TTEEEESSSEECCHHHHHHHHHHHHHSCSCCCCCCSCCHHHHHHHHHHTCCCBGGGGGCTTTHHHHHHHHHHHHHHHCTT
T ss_pred CCEEEcCCCCCCCchHHHHHHHHHHhcCCCCCCCCCCCcHHHhHhhhhccCcEeecccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccCCC
Q 015193 162 LKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIA 241 (411)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~Gi~ 241 (411)
+..+++++++++++|++|+++|+|||+|++.+|++++++||+||||||||+|||+|||||||||||||+++|+|+|+|++
T Consensus 194 ~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDiD~GtYPyVTSSnttagga~~G~Gi~ 273 (443)
T 1dj2_A 194 FKYTPEMLREEVEAYKRYADRLEPYITDTVHFINDSISQKKKVLVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIA 273 (443)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCTTTSSTTSSCSSCCSTHHHHHTTTCC
T ss_pred hccCcCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEecchhhhhhccCcCcCCCCCcchHhhhhhccCCC
Confidence 76556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCeEEEEEeecccccCCCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcceEeeeccccc
Q 015193 242 PRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVL 321 (411)
Q Consensus 242 p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~lalTklDvL 321 (411)
|++|++||||+|||+||||+||||||++++.|+.||++|+|||+||||||||||||+|++|||+++||+|+|||||||||
T Consensus 274 P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~l~~~G~E~GttTGR~RRcGWfD~v~lrya~~inG~t~lalTkLDvL 353 (443)
T 1dj2_A 274 PSVVGDLIGVVKAYTTRVGSGPFPTENLGTGGDLLRLAGQEFGTTTGRPRRCGWLDIVALKFSCQINGFASLNLTKLDVL 353 (443)
T ss_dssp TTTCCCEEEEEESEEEESSSSCCTTBCCSHHHHHHHHHHTCBCTTTCCBCEEEEEEHHHHHHHHHHHTCSEEEEECGGGG
T ss_pred cccCCeEEEEEEecCCcccCCCCCCcCCchhhHHhhhcCCeeCCCCCCCccCCcchHHHHHHHHHHcCCCeEEEECcCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCeEEEee
Q 015193 322 SELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGV 401 (411)
Q Consensus 322 ~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvpv~~is~ 401 (411)
|+|++||||++|++++|+++++||++++.|++|+|||++||||++|+++||+|+|||+|||+||++||+++|+||.|||+
T Consensus 354 d~~~~ikicv~Y~~~~G~~~~~~P~~~~~l~~~~PvYe~~pGW~~~~~~~r~~~~LP~~a~~Yi~~iEe~~gvpv~~is~ 433 (443)
T 1dj2_A 354 SDLNEIQLGVAYKRSDGTPVKSFPGDLRLLEELHVEYEVLPGWKSDISSVRNYSDLPKAAQQYVERIEELVGVPIHYIGI 433 (443)
T ss_dssp GGCSEEEEEEEEECSSSCBCCSCCSCHHHHHHCEEEEEEEECCCSCCTTCCSSTTSCHHHHHHHHHHHHHHCSCEEEEEC
T ss_pred CCCCceeEEEEEEcCCCeEeeeCCCChHHhccceEEEEECCCCCcccccCcchhhCCHHHHHHHHHHHHHHCCCEEEEEe
Confidence 99999999999999899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccC
Q 015193 402 GPGRDALIYK 411 (411)
Q Consensus 402 Gp~r~~~i~~ 411 (411)
||+|+|||.|
T Consensus 434 GP~R~~ti~r 443 (443)
T 1dj2_A 434 GPGRDALIYK 443 (443)
T ss_dssp SSSSSCEEEC
T ss_pred CCCHHHeecC
Confidence 9999999975
No 2
>3hid_A Adenylosuccinate synthetase; niaid structural genomics, virulence associated factor, PURA, purine ribonucleotide biosynthesis, cytoplasm; 1.60A {Yersinia pestis CO92} SCOP: c.37.1.10 PDB: 1kjx_A* 1kkb_A* 1kkf_A* 1ade_A 1adi_A 1cg0_A* 1ch8_A* 1cib_A* 1gim_A* 1gin_A* 1hon_A* 1hoo_A* 1hop_A* 1juy_A* 1ksz_A* 1nht_A* 1qf4_A* 1qf5_A* 1son_A* 1soo_A* ...
Probab=100.00 E-value=9.8e-161 Score=1221.33 Aligned_cols=409 Identities=42% Similarity=0.709 Sum_probs=392.8
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~~~ 81 (411)
|||+||+||..+|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+||||||+||++|++||+.|+++|+++.
T Consensus 17 KGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~l~~Ei~~L~~~Gv~~~ 95 (432)
T 3hid_A 17 KGKVVDLLTERAKYVVRYQGGHNAGHTLV-INGEKTVLHLIPSGILRENVISIIGNGVVLAPDALMKEMTELEARGVPVR 95 (432)
T ss_dssp HHHHHHHHHTTCSEEEECSBCSCCCEEEE-ETTEEEEESSSCTTTTSTTCEEEECTTBCBCHHHHHHHHHHHHHTTCCHH
T ss_pred CceeeeeecCcCCEEEEcCCcCCCCCeEE-ECCEEEEEEecCceecCCCCeEEEcCCEEEcHHHHHHHHHHHHHcCCCCC
Confidence 89999999999999999999999999999 99999999999999999999999999999999999999999999999865
Q ss_pred CceEEeCCceecchhHHHhhHHHHHHhcCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhccC
Q 015193 82 GRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPG 161 (411)
Q Consensus 82 ~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~ 161 (411)
+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|++||+++++++|.++..
T Consensus 96 ~rL~Is~rahli~p~H~~lD~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~~~~~~~~kl~~~~~~~~~~l~~ 175 (432)
T 3hid_A 96 ERLLLSEACPLILPYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVSDLFNKETFAIKLKEIVEYHNFQLVH 175 (432)
T ss_dssp HHEEECTTCBBCCHHHHHHHHHHHHTCC--------TTHHHHHHHHHHTCSCBGGGGGSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCceECChHHHHhhhhhHhhcCCCCcCCCCCCcHHHhhhhccccCceeehhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999988875
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccCC
Q 015193 162 -LKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGI 240 (411)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~Gi 240 (411)
++.+++++++++++|++++++|+||++|+..+|++++++||+||||||||+|||+|||||||||||||+++|+|+|+|+
T Consensus 176 ~~~~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~iLfEGAQG~lLDiD~GtYP~VTSSnt~agga~~g~Gi 255 (432)
T 3hid_A 176 YYKEAAVDYQKVLDDVLAIADILTAMVVDVSELLDNARKQGELIMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGL 255 (432)
T ss_dssp TSCCCCCCHHHHHHHHHHHHHHHHTTBCCHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSCCSSCCSGGGHHHHHCC
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHCCCeEEEEecchhhhccccCcCCCcCCCCcchhhHhhccCC
Confidence 3566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEeecccccCCCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcceEeeecccc
Q 015193 241 APRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDV 320 (411)
Q Consensus 241 ~p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~lalTklDv 320 (411)
+|++|++||||+|||+||||+||||||++++.|+.||+.|+|||+||||||||||||+|++|||+++||+|+||||||||
T Consensus 256 ~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~G~tTGR~RRcGW~D~v~lrya~~inG~t~lalTkLDv 335 (432)
T 3hid_A 256 GPRYVDYVLGIVKAYSTRVGAGPFPTELNDETGEFLRKQGNEYGATTGRSRRTGWLDIVAVRRAVQINSLSGFCMTKLDV 335 (432)
T ss_dssp CGGGCCEEEEEEESEEEECSSSCCTTBCCSHHHHHHHHHTTCCCSSTTCCCEEEEEEHHHHHHHHHHHTCCEEEEECGGG
T ss_pred CchhcceEEEEEEECcccccCCCCCCccCcchHHHHHhcCCccCCcCCCCccccchhHHHHHHHHHhcCCCeEEEeccee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCeEEEe
Q 015193 321 LSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIG 400 (411)
Q Consensus 321 L~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvpv~~is 400 (411)
||+|++||||++|++++|+++++||++++.|++|+|||++||||++|++++|+|++||+|||+||++||+++|+||+|||
T Consensus 336 Ld~~~~ikvcv~Y~~~~G~~~~~~P~~~~~l~~~~pvYe~~pGW~~~~~~~~~~~~LP~~a~~Yi~~iEe~~gvpv~~is 415 (432)
T 3hid_A 336 LDGLKEVKLCVGYRMPDGREVDTTPLAAEGWEGIEPIYETMPGWSETTFGVKEHSKLPQAALNYIQRVEELTGVPIDIIS 415 (432)
T ss_dssp GTTCSEEEEEEEEECTTSCEESSCCCTTTCSTTCEEEEEEEECCSSCSTTCCSGGGSCHHHHHHHHHHHHHHSCCEEEEE
T ss_pred cCCCCceeEEEEEEcCCCeEEeeCCCCHHHhCCceEEEEeCCCCccccccCCChhHcCHHHHHHHHHHHHHHCCCEEEEE
Confidence 99999999999999989999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCccccccC
Q 015193 401 VGPGRDALIYK 411 (411)
Q Consensus 401 ~Gp~r~~~i~~ 411 (411)
+||+|+|||.+
T Consensus 416 ~GP~R~~~I~~ 426 (432)
T 3hid_A 416 TGPDRDETMIL 426 (432)
T ss_dssp CSSBTTSEEES
T ss_pred cCCCHHHeEec
Confidence 99999999863
No 3
>3ue9_A Adenylosuccinate synthetase; ssgcid, ligase, ADSS, BTH_I2245, IMP-aspartate ligase, struc genomics; 1.95A {Burkholderia thailandensis}
Probab=100.00 E-value=8e-160 Score=1218.84 Aligned_cols=408 Identities=41% Similarity=0.693 Sum_probs=384.2
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~~~ 81 (411)
|||+||+||..+|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||++|++||+.|+++|+++.
T Consensus 30 KGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhllPSGil~~~~~~vIGnGvVvdp~~l~~Ei~~L~~~Gv~~~ 108 (452)
T 3ue9_A 30 KGKIVDWLTDHAQGVVRFQGGHNAGHTLI-IGGKKTILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGLSVR 108 (452)
T ss_dssp HHHHHHHHHTTCSEEEECSBCCC--CC-----CCCCCCSSSCGGGGSTTCEEEECTTBEECHHHHHHHHHHHHHTTCCCG
T ss_pred CceeeeeecCcCCEEEEcCCcCCCCceEE-ECCEEEEEEecCceeccCCCcEEEcCCEEEcHHHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999999999999 99999999999999999999999999999999999999999999999876
Q ss_pred CceEEeCCceecchhHHHhhHHHHHHhcCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhccC
Q 015193 82 GRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPG 161 (411)
Q Consensus 82 ~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~ 161 (411)
+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|++||++++++++.++..
T Consensus 109 ~rL~Is~rahli~p~H~~lD~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~d~~~~~~kl~~~~~~~~~~l~~ 188 (452)
T 3ue9_A 109 ERLFISEATTLILPYHIAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDARTFADRLRENLDFHNFVLTQ 188 (452)
T ss_dssp GGEEEETTCEECCHHHHHHHHHHHHC----------CCHHHHHHHHHTTCCCBGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEECCCceECCHHHHHhhhhhhhhccCCccccCCCCcHHHhhhhccccCceeehhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999988865
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccCC
Q 015193 162 -LKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGI 240 (411)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~Gi 240 (411)
++..++++++++++|++|+++|+|||+|+..+|++++++||+||||||||+|||+|||||||||||||+++|+|+|+|+
T Consensus 189 ~~~~~~~d~e~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~ILfEGAQG~lLDiD~GtYPyVTSSnt~agga~~G~Gi 268 (452)
T 3ue9_A 189 YLGGAAVDFQATLDTMLGYADRLRPMVADVSRRLYEENHAGRNLLFEGAQGTLLDIDHGTYPFVTSSNCVAGAAAAGAGV 268 (452)
T ss_dssp TSCCCCCCHHHHHHHHHTTHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSSCSSCCSTTHHHHHHTC
T ss_pred hcCCCCCCHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHcCCcEEEEecchhhhccccCcCCCcCCCCcchhhHhhccCC
Confidence 3566778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEeecccccCCCCCCCccCC--------CccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcce
Q 015193 241 APRVVGDLIGVVKAYTTRVGSGPFPTEIFG--------QGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSS 312 (411)
Q Consensus 241 ~p~~i~~viGV~KAY~TRVG~GPfpTE~~~--------~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~ 312 (411)
+|++|++||||+|||+||||+||||||+++ +.|+.||++|+|||+||||||||||||+|++|||+++||+|+
T Consensus 269 ~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~~~~~~~~~e~g~~Lr~~G~E~GttTGR~RRcGW~D~v~lrya~~inG~t~ 348 (452)
T 3ue9_A 269 GPQKLNYILGITKAYCTRVGSGPFPSELYDADNPSRQDQIGITLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSG 348 (452)
T ss_dssp CGGGCCEEEEEEESEEEECSSSCCTTEEECTTCTTCBCHHHHHHHHHTTCBCTTTCCBCEEEEEEHHHHHHHHHHHTCCE
T ss_pred CchhcceEEEEEEeccccccCCCCCccccccccccccccHHHHHhhcCCCcCCcCCCCccCccccHHHHHHHHHHcCCCe
Confidence 999999999999999999999999999998 899999999999999999999999999999999999999999
Q ss_pred EeeecccccCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHh
Q 015193 313 LNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELV 392 (411)
Q Consensus 313 lalTklDvL~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~ 392 (411)
||||||||||+|++||||++|++ +|+++++||++++.|++|+|||++||||++|++++|+|+|||+|||+||++||+++
T Consensus 349 lalTkLDvLd~~~~ikvcvaY~~-~G~~~~~~P~~~~~l~~~~pvYe~~pGW~~~~~~~r~~~~LP~~a~~Yi~~IEe~~ 427 (452)
T 3ue9_A 349 LCMTKLDVLDGLDEVKLCVGYKI-DGEDADLLPRGAAEVARCEPVYETFGGWKESTVGINSWDALPANARAYLTRVQEVA 427 (452)
T ss_dssp EEEECGGGGTTCSEEEEEEEEEE-TTEEECSCCSSHHHHHHCEEEEEEEECCCSCCTTCCSGGGSCHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCceeEEEEEec-CCEEEecCCCCHHHhCCcEEEEEeCCCCccccccCCChhHcCHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEeeCCCccccccC
Q 015193 393 GVPINYIGVGPGRDALIYK 411 (411)
Q Consensus 393 gvpv~~is~Gp~r~~~i~~ 411 (411)
|+||+|||+||+|+|||.+
T Consensus 428 gvpV~~is~GP~R~~~I~~ 446 (452)
T 3ue9_A 428 GVPIDMVSTGPDRDETILL 446 (452)
T ss_dssp TSCEEEEECSSSTTSEEES
T ss_pred CCCEEEEEcCCCHHHeeec
Confidence 9999999999999999863
No 4
>2v40_A Adenylosuccinate synthetase isozyme 2; ligase, purine biosynthesis, metal- binding, purine metabolism, nucleotide-binding, GDP, ADSS2, magnesium; HET: GDP; 1.9A {Homo sapiens} PDB: 1iwe_A* 1j4b_A 1lny_A* 1lon_A* 1loo_A* 1mez_A* 1mf0_A* 1mf1_A* 2dgn_A*
Probab=100.00 E-value=2.6e-159 Score=1213.96 Aligned_cols=405 Identities=46% Similarity=0.870 Sum_probs=388.6
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHh--CCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEA--NGVS 79 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~--~g~~ 79 (411)
|||+||+||..+|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||++|++||+.|++ +|++
T Consensus 46 KGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~L~~Ei~~L~~~~~Gv~ 124 (459)
T 2v40_A 46 KGKVVDLLAQDADIVCRCQGGNNAGHTVV-VDSVEYDFHLLPSGIINPNVTAFIGNGVVIHLPGLFEEAEKNVQKGKGLE 124 (459)
T ss_dssp HHHHHHHHHTTCSEEEECSBCSCCCEEEE-ETTEEEEESSSCGGGGSTTCEEEECTTBEEEHHHHHHHHHHHHHHCGGGT
T ss_pred CceEEEEeccCCCEEeecCccCCCCcEEE-ECCEEEEEEccCccccCCCceEEECCcEEEcHHHHHHHHHHHHhhhcCCC
Confidence 89999999999999999999999999999 99999999999999999999999999999999999999999999 8865
Q ss_pred -CCCceEEeCCceecchhHHHhhHHHHHHhcCCC---ccCCCCcchhhhccccccCcceEeeCC-CCCcHHHHHHHHHHH
Q 015193 80 -CKGRILVSDRAHLLFDFHQEIDGLREAELAKSF---IGTTRRGIGPAYSSKVIRNGIRVCDLR-HMDTFPQKLDLLLSD 154 (411)
Q Consensus 80 -~~~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~---iGTTgrGIGpay~dk~~R~gir~~DL~-~~~~l~~kL~~~~~~ 154 (411)
+.+||+||+|||||||||+++|+++|.+++.++ ||||||||||||+||++|+|||++||+ |++.|++||+.++++
T Consensus 125 ~~~~rL~IS~rahli~p~H~~lD~~~E~~~g~~~~~~IGTTgrGIGPaY~DK~~R~giRv~DL~~d~~~~~~kl~~~~~~ 204 (459)
T 2v40_A 125 GWEKRLIISDRAHIVFDFHQAADGIQEQQRQEQAGKNLGTTKKGIGPVYSSKAARSGLRMCDLVSDFDGFSERFKVLANQ 204 (459)
T ss_dssp TGGGSEEEETTCEEECHHHHHHHHHHHHC------------CCCHHHHHHHHHHTCCCBHHHHTSCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeCCccCCCccHHHhhHHHHHhcCCCCCCCcCCCCCCcHHHHHhhhhccccEeehhccCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999998777 999999999999999999999999997 999999999999999
Q ss_pred HHhhccCCCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHH-HcCCcEEEEecccccccccCCCCCcccCCCCCccc
Q 015193 155 AAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESI-AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGG 233 (411)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al-~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g 233 (411)
+|.++..+. +++++++++|++|+++|+|||+|++.+|++|+ ++||+||||||||+|||+|||||||||||||+++|
T Consensus 205 ~n~~l~~~~---~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~~gk~VLfEGAQG~lLDiD~GTYPyVTSSnttagg 281 (459)
T 2v40_A 205 YKSIYPTLE---IDIEGELQKLKGYMEKIKPMVRDGVYFLYEALHGPPKKILVEGANAALLDIDFGTYPFVTSSNCTVGG 281 (459)
T ss_dssp HHHHCTTCC---CCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHSSCCCEEEECCSCGGGCTTTSSTTSSCSSCCSTHH
T ss_pred HHHHHhhCC---CCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHhCCCEEEEEechhhhhhcccCcCcCCCCCcchHhh
Confidence 999998873 67999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred cccccCCCCcccCeEEEEEeecccccCCCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcceE
Q 015193 234 ICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSL 313 (411)
Q Consensus 234 ~~~g~Gi~p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~l 313 (411)
+|+|+|++|++|++||||+|||+||||+||||||++++.|+.||++|+|||+||||||||||||+|++|||+++||+|+|
T Consensus 282 a~~G~Gi~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~L~~~G~E~GttTGR~RRcGWfD~v~lrya~~inG~t~l 361 (459)
T 2v40_A 282 VCTGLGMPPQNVGEVYGVVKAYTTRVGIGAFPTEQDNEIGELLQTRGREFGVTTGRKRRCGWLDLVLLKYAHMINGFTAL 361 (459)
T ss_dssp HHHHHTCCGGGEEEEEEEEESSEEESSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHHHHHHHHHCCSEE
T ss_pred hhhccCCCcccCCeEEEEEeeccceecCCCCCcccChhHHHHhhhcCCcccCCCCCCcccccchHHHHHHHHHHcCCCeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccccCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhC
Q 015193 314 NLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVG 393 (411)
Q Consensus 314 alTklDvL~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~g 393 (411)
|||||||||+|++||||++|++ +|+++++||++++.|++|+|||++||||++|+++||+|+|||+|||+||++||+++|
T Consensus 362 alTKLDvLd~l~~ikvcvaY~~-~G~~~~~~P~~~~~l~~~~PvYe~~pGW~~d~~~~r~~~dLP~~A~~Yi~~IEe~~g 440 (459)
T 2v40_A 362 ALTKLDILDMFTEIKVGVAYKL-DGEIIPHIPANQEVLNKVEVQYKTLPGWNTDISNARAFKELPVNAQNYVRFIEDELQ 440 (459)
T ss_dssp EEECGGGGGGCSEEEEEEEEEE-TTEEESSCCSSHHHHTTCEEEEEEEECCCSCCTTCCSGGGSCHHHHHHHHHHHHHHT
T ss_pred EEECcCcCCCCCeeeEEEEEee-CCEEeeeCCCChHHhhcceEEEEECCCCCcccccccchhhCCHHHHHHHHHHHHHHC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEeeCCCccccccC
Q 015193 394 VPINYIGVGPGRDALIYK 411 (411)
Q Consensus 394 vpv~~is~Gp~r~~~i~~ 411 (411)
+||+|||+||+|+|||..
T Consensus 441 vpV~~is~GP~R~~ti~~ 458 (459)
T 2v40_A 441 IPVKWIGVGKSRESMIQL 458 (459)
T ss_dssp CCEEEEECSSSTTSEEEC
T ss_pred CCEEEEEeCCCHHHeecc
Confidence 999999999999999853
No 5
>1p9b_A Adenylosuccinate synthetase; ligase; HET: IMO GDP; 2.00A {Plasmodium falciparum} SCOP: c.37.1.10
Probab=100.00 E-value=4.1e-158 Score=1200.59 Aligned_cols=401 Identities=43% Similarity=0.759 Sum_probs=390.8
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~~~ 81 (411)
|||+||+||..+|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+|||||||||++|++||+.|+++ +.
T Consensus 29 KGKivD~La~~~d~VvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~L~~Ei~~L~~~-v~-- 104 (442)
T 1p9b_A 29 KGKIIDMLSEYSDITCRFNGGANAGHTIS-VNDKKYALHLLPCGVLYDNNISVLGNGMVIHVKSLMEEIESVGGK-LL-- 104 (442)
T ss_dssp HHHHHHHHGGGCSEEEECSCCTTCCEEEE-ETTEEEEESSSCTTTTSTTCEEEECTTCEECHHHHHHHHHHHCTT-GG--
T ss_pred CceEEeeecccCCEEEEcCccCCCCcEEE-ECCEEEEEEecCccccCCCceEEECCcEEEcHHHHHHHHHHHHhh-cc--
Confidence 89999999999999999999999999999 999999999999999999999999999999999999999999987 44
Q ss_pred CceEEeCCceecchhHHHhhHHHHHHh--cCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhc
Q 015193 82 GRILVSDRAHLLFDFHQEIDGLREAEL--AKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARF 159 (411)
Q Consensus 82 ~rL~IS~rAhiv~p~H~~~D~~~E~~~--g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~ 159 (411)
+||+||+|||||||||+++|+++|.++ |.++||||||||||||+||++|+|||++||+|++.|++||+.+++++...+
T Consensus 105 ~rL~IS~rahli~p~H~~lD~~~E~~~~~g~~~IGTTgrGIGPaY~dK~~R~giRv~DL~d~~~~~~kl~~~~~~~~~~y 184 (442)
T 1p9b_A 105 DRLYLSNKAHILFDIHQIIDSIQETKKLKEGKQIGTTKRGIGPCYSTKASRIGIRLGTLKNFENFKNMYSKLIDHLMDLY 184 (442)
T ss_dssp GGEEEETTSEECCHHHHHHHHHHHHHHHHTTCCCCCCSSSHHHHHHHHHTTCCCBGGGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEECCCccCCChhHHHHHHHhHHhhhcCCCCCCCCCCCcHHHHHHHHhccccEehHhcCHHHHHHHHHHHHHHHHhhc
Confidence 899999999999999999999999999 778999999999999999999999999999999999999999999996544
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccC
Q 015193 160 PGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLG 239 (411)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~G 239 (411)
. .+++++++++++|++|+++|+|||+|++.+|++|+++||+||||||||+|||+|||||||||||||+++|+|+|+|
T Consensus 185 ~---~~~~d~~~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~vLfEGAQG~lLDiD~GtYPyVTSSnttagga~~G~G 261 (442)
T 1p9b_A 185 N---ITEYDKEKELNLFYNYHIKLRDRIVDVISFMNTNLENNKKVLIEGANAAMLDIDFGTYPYVTSSCTTVGGVFSGLG 261 (442)
T ss_dssp T---CCCCCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSSCSSCCSHHHHHHTTT
T ss_pred C---CCCCCHHHHHHHHHHHHHHHhcccccHHHHHHHHHHCCCeEEEEeccHhhhhhcCCcCcCccCccchHhHHHhccC
Confidence 3 4567799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCeEEEEEeecccccCCCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcceEeeeccc
Q 015193 240 IAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLD 319 (411)
Q Consensus 240 i~p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~lalTklD 319 (411)
++|++|++||||+|||+||||+||||||+++++|+.||+.|+|||+||||||||||||+|++|||+++||+|+|||||||
T Consensus 262 i~P~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGR~RRcGWfD~v~lrya~~inG~t~lalTkLD 341 (442)
T 1p9b_A 262 IHHKKLNLVVGVVKSYLTRVGCGPFLTELNNDVGQYLREKGHEYGTTTKRPRRCGWLDIPMLLYVKCINSIDMINLTKLD 341 (442)
T ss_dssp CCGGGCCEEEEEEESSEEECSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHHHHHHHHHCCSEEEEECGG
T ss_pred CCcccCCeEEEEEeeccceecCCCCCcccchHHHHHHHhcCCeeCCcCCCCccCCcchHHHHHHHHHHcCCCeEeeeccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCcEEEeeee--cCCCceec--cCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCC
Q 015193 320 VLSELPEIQLGVAYK--QFDGTPVK--SFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVP 395 (411)
Q Consensus 320 vL~~~~~ikIc~~Y~--~~~g~~~~--~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvp 395 (411)
|||+|++||||++|+ + +|++++ +||++++.|++|+|||++||||++|+++||+|++||+|||+||++||+++|+|
T Consensus 342 vLdgl~~ikicv~Y~~~~-~G~~~~~~~~P~~~~~l~~~~PvYe~~pGW~~~~~~~r~~~~LP~~a~~Yi~~IEe~~gvp 420 (442)
T 1p9b_A 342 VLSGLEEILLCVNFKNKK-TGELLEKGCYPVEEEISEEYEPVYEKFSGWKEDISTCNEFDELPENAKKYILAIEKYLKTP 420 (442)
T ss_dssp GGTTCSEEEEEEEEEETT-TCCBCCTTCCCCSHHHHTTEEEEEEEEECCCSCCTTCCSGGGSCHHHHHHHHHHHHHHTCC
T ss_pred ccCCCCceeEEEEEeecc-CCEEeecCcCCCChHHhccceEEEEECCCCCcccccccchhhCCHHHHHHHHHHHHHHCCC
Confidence 999999999999999 8 999999 99999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeeCCCcccccc
Q 015193 396 INYIGVGPGRDALIY 410 (411)
Q Consensus 396 v~~is~Gp~r~~~i~ 410 (411)
|+|||+||+|+|+|.
T Consensus 421 v~~is~GP~R~~ii~ 435 (442)
T 1p9b_A 421 IVWIGVGPNRKNMIV 435 (442)
T ss_dssp EEEEECSSSTTCEEE
T ss_pred EEEEEeCCCHHHeec
Confidence 999999999999664
No 6
>3r7t_A Adenylosuccinate synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol; HET: CIT PGE; 2.30A {Campylobacter jejuni} SCOP: c.37.1.0
Probab=100.00 E-value=9.2e-158 Score=1194.36 Aligned_cols=399 Identities=42% Similarity=0.736 Sum_probs=381.3
Q ss_pred CcceeeeccCCCcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCCCC
Q 015193 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81 (411)
Q Consensus 2 kg~~~~~l~~~~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~~~ 81 (411)
|||+||+||..+|+|||||||+||||||+ ++|++|+|||||||+|+|+++|+||||||+||++|++||+.|++ ++
T Consensus 20 KGKivD~La~~~dvVvR~qGG~NAGHTVv-~~g~k~~lhliPSGil~~~~~~vIGnGvVvdp~~l~~Ei~~L~~--v~-- 94 (419)
T 3r7t_A 20 KGKVVDKLCENYDFVCRSAGGHNAGHTIW-VNGVRYALHLMPSGVLHPRCINIIGNGVVVSPEVLIAEMAQFEN--LK-- 94 (419)
T ss_dssp HHHHHHHHHTTCSEEEECSBCTTSSEEEE-ETTEEEEESSSCGGGGSTTCEEEECTTBEECHHHHHHHHTTSSC--CT--
T ss_pred CceeeeeecccCCEEEEcCCcCCCCcEEE-ECCEEEEEEecCceEcCCCCeEEECCCEEEcHHHHHHHHHHHhc--cC--
Confidence 89999999999999999999999999999 99999999999999999999999999999999999999999987 54
Q ss_pred CceEEeCCceecchhHHHhhHHHHHHhcCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhccC
Q 015193 82 GRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPG 161 (411)
Q Consensus 82 ~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~ 161 (411)
+||+||+|||||||||+++|+++|.+++.++||||||||||||+||++|+|||++||+|++.|++||+++++.+| ++..
T Consensus 95 ~rL~Is~rahli~p~H~~~D~~~E~~~g~~~iGTTgrGIGPaY~dK~~R~giRv~DL~~~~~~~~kl~~~~~~~~-~l~~ 173 (419)
T 3r7t_A 95 GRLYISDRAHLNLKHHSLIDIAKEKLKGKNAIGTTGKGIGPSYADKINRTGHRVGELLEPQRLCEALIKDFEANK-TFFE 173 (419)
T ss_dssp TTEEEETTSEECCHHHHHHHHHHHHHCCT--------THHHHHHHHHTTCCCBGGGGGSHHHHHHHHHHHHHHTH-HHHH
T ss_pred CCEEECCCCCCCChHHHHhhhhhhhhcCCCCcCCCCCChHHhhhhhccccCceeehhcCHHHHHHHHHHHHHHHH-HHHH
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999999 6654
Q ss_pred -CCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccCC
Q 015193 162 -LKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGI 240 (411)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~Gi 240 (411)
++.+++++++++++|.+|+++|+||++|+..+|++++++||+||||||||+|||+|||||||||||||+++|+|+|+|+
T Consensus 174 ~~~~~~~~~e~~~~~~~~~~~~l~p~v~D~~~~l~~a~~~gk~iLfEGAQG~lLDid~GtYP~VTSSnt~a~ga~~g~Gi 253 (419)
T 3r7t_A 174 MLEIEIPSAEELLADLKRFNEILTPYITDTTRMLWKALDEDKRVLLEGAQGSMLDIDHGTYPYVTSSSTISAGTLTGLGL 253 (419)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHHGGGEECHHHHHHHHHHTTCCEEEECCSCGGGCTTTSSTTSSCSSCCSHHHHHHHHTC
T ss_pred hcCCCCCCHHHHHHHHHHHHHHhccccccHHHHHHHHHHcCCcEEEEecchhhhccccCcCCCcCCCCcchhhHhhccCC
Confidence 4566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCeEEEEEeecccccCCCCCCCccCCCccchhhhccCCCCCCCCCCCccccchHHHHHHHHHhcCcceEeeecccc
Q 015193 241 APRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDV 320 (411)
Q Consensus 241 ~p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~lalTklDv 320 (411)
+|++|++||||+|||+||||+||||||++++.|+.||+.|+|||+||||||||||||+|++|||+++||+|+||||||||
T Consensus 254 ~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~lr~~G~E~GttTGR~RRcGw~D~v~lrya~~ing~t~lalTkLDv 333 (419)
T 3r7t_A 254 NPKEAGNIIGIVKAYATRVGNGAFPTEDKGEDGEKIAQIGKEIGVSTGRKRRCGWFDAVAVRYTARLNGLDALSLMKLDV 333 (419)
T ss_dssp CGGGEEEEEEEEESSEEESSSSCCTTBCCSHHHHHHHHHTTCBCTTTCCBCEEECEEHHHHHHHHHHHTCSEEEEECGGG
T ss_pred CchhcceEEEEEEeccccccCCCCCCcCCchhHHHHHhcCCCcCCcCCCCccccccHHHHHHHHHHhcCCCeEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCeEEEe
Q 015193 321 LSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIG 400 (411)
Q Consensus 321 L~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvpv~~is 400 (411)
||+|++||||++|++ +|+++++||+++ ++|+|||++|||| +|++++|+|+|||+|||+||++||+++|+||+|||
T Consensus 334 L~~~~~ikvcv~Y~~-~G~~~~~~P~~~---~~~~pvYe~~pGW-~~~~~~~~~~~LP~~a~~yi~~iEe~~gvpv~~is 408 (419)
T 3r7t_A 334 LDGFEKIKICRAYEY-KGMEIDYIPSDL---ENVQPIYEEMDGW-DKVFGIKDYDLLPENAKKYIARLEELAGVKVKYIS 408 (419)
T ss_dssp GTTCSEEEEEEEEEE-TTEEESSCCSCG---GGEEEEEEEEECC-SCCTTCCCGGGSCHHHHHHHHHHHHHHTSCEEEEE
T ss_pred hcCCCceeEEEEEee-CCEEEeeCCCCc---cccEEEEEecCCc-hhccCCCChHHccHHHHHHHHHHHHHHCCCEEEEE
Confidence 999999999999999 999999999986 7999999999999 99999999999999999999999999999999999
Q ss_pred eCCCccccccC
Q 015193 401 VGPGRDALIYK 411 (411)
Q Consensus 401 ~Gp~r~~~i~~ 411 (411)
+||+|+|||.+
T Consensus 409 ~GP~R~~~I~~ 419 (419)
T 3r7t_A 409 TSPERDDTIIL 419 (419)
T ss_dssp CSSSTTCEEEC
T ss_pred cCCCHHHeEeC
Confidence 99999999864
No 7
>2d7u_A Adenylosuccinate synthetase; structural genomics, conserved hypothetical protein, NPPSFA; 2.50A {Pyrococcus horikoshii}
Probab=100.00 E-value=4.7e-133 Score=987.27 Aligned_cols=316 Identities=37% Similarity=0.642 Sum_probs=293.1
Q ss_pred CcceeeeccCC--CcEEEEecCCCCCCcEEEecCCeEEEEeecCceeecCCceeEecCCeEechHHHHHHHHHhHhCCCC
Q 015193 2 KAKASSSISLP--STSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79 (411)
Q Consensus 2 kg~~~~~l~~~--~d~VvRf~GG~NAGHTVv~~~g~~~~lhliPSGil~~~~~~~ig~GvVv~p~~l~~Ei~~L~~~g~~ 79 (411)
|||+||+||.. +|+|||||||+||||||+ ++|++|+|||||||+|+++++|+||||||+||+.|++||+.|+++|+.
T Consensus 16 KGKivD~La~~~~~d~VvR~qGG~NAGHTVv-~~g~~~~lhllPSGi~~~~~~~vIGnGvVvdp~~l~~Ei~~L~~~Gv~ 94 (339)
T 2d7u_A 16 KGSIVAYLSLHDEPEIIARGGVGTNAGHSVV-INGKKYAVRQIPTGFMQTKARLLIGAGVLVDPEVFFHELEQLKDFNVK 94 (339)
T ss_dssp HHHHHHHHHHHTCCSEEEECSSSSSCCEEEE-ETTEEEEESSSCTTTTCSSSBEEECTTSCBCHHHHHHHHHHTGGGTGG
T ss_pred CceeEeeeccCCCCCEEEEcCccCCCCcEEE-ECCEEEEEEcCCccccCCCceEEECCcEEEcHHHHHHHHHHHHHCCCC
Confidence 89999999998 999999999999999999 999999999999999999999999999999999999999999999976
Q ss_pred CCCceEEeCCceecchhHHHhhHHHHHHhcCCCccCCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhc
Q 015193 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARF 159 (411)
Q Consensus 80 ~~~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~~iGTTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~ 159 (411)
+||+||+||||+||||+++|+++|.++ ++||||||||||||+||++|+|||++||
T Consensus 95 --~rL~Is~ra~li~p~H~~~D~~~E~~~--~~iGTTgrGIGPay~dK~~R~giRv~Dl--------------------- 149 (339)
T 2d7u_A 95 --DRVGIDYRCAIIEEKHKQLDRTNGYLH--GKIGTTGSGCGPANADRVMRKAKQAKDV--------------------- 149 (339)
T ss_dssp --GTEEEETTCBBCCHHHHC------------------CCHHHHHHHHTTTCSCBGGGC---------------------
T ss_pred --CCEEECCCccCCChhHHHHhHHhHHhh--ccCCCCCCCchHHHHHHHhccCccHHHH---------------------
Confidence 899999999999999999999999987 6899999999999999999999999998
Q ss_pred cCCCCCCCcHHHHHHHHHHHHHHhcccccchHHHHHHHHHcCCcEEEEecccccccccCCCCCcccCCCCCccccccccC
Q 015193 160 PGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLG 239 (411)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~d~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP~VTSSnt~~~g~~~g~G 239 (411)
++|+||++|+..+|++|+++||+||||||||+|||+|||||||||||||+++|+|+|+|
T Consensus 150 ---------------------~~l~p~v~D~~~~l~~a~~~gk~vLfEGaQG~lLDid~GtYP~VTSSnt~a~g~~~g~G 208 (339)
T 2d7u_A 150 ---------------------KELEPYLTDVAQEINDALDEGSLVLVEGTQGFGLSLYYGTYPYVTSKDVTASSVAADVG 208 (339)
T ss_dssp ---------------------SSSSTTEECHHHHHHHHHHTTCCEEEEEEEEGGGCTTTSSTTSSCSSCCSHHHHHHHHT
T ss_pred ---------------------HHHhccccCHHHHHHHHHHcCCeEEEEechHhhhhccCCcCCCccCCCchhhhhhhccC
Confidence 47889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCeEEEEEeecccccCCCCCCCccCCCccchhhhcc-CCCCCCCCCCCccccchHHHHHHHHHhcCcceEeeecc
Q 015193 240 IAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAG-QEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318 (411)
Q Consensus 240 i~p~~i~~viGV~KAY~TRVG~GPfpTE~~~~~g~~lr~~g-~E~G~tTGRpRR~GwlD~v~lrya~~ing~~~lalTkl 318 (411)
++|++|++||||+|||+||||+||||||++++.++. .| +|||+||||||||||||+|++|||+++||+|+||||||
T Consensus 209 i~p~~i~~ViGV~KAYtTRVG~GPFPTEl~~e~g~~---~G~~E~GttTGR~RRcGw~D~v~~rya~~ing~t~lalTkL 285 (339)
T 2d7u_A 209 IGPTRVDEVIVVFKSFPTRVGAGPFPTEMPMEEADR---LGLVEYGTVTGRRRRVGWFDFEMARYSARINGATMLAVTML 285 (339)
T ss_dssp CCGGGCCEEEEEEESSCEECSSSCCTTBCCHHHHHH---TTCCCBCTTTCCBCEEBCCCHHHHHHHHHHTTCSEEEEECG
T ss_pred CCccccCeEEEEEeeccceecCCCCCchhhhhhhhh---cCCCcccCcCCCCcccCcchHHHHHHHHHhcCCCeEEEEcc
Confidence 999999999999999999999999999999998887 89 99999999999999999999999999999999999999
Q ss_pred cccCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCeEE
Q 015193 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINY 398 (411)
Q Consensus 319 DvL~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvpv~~ 398 (411)
||||+ ++++|++|+|||+|||+||++||+++|+||+|
T Consensus 286 DvLd~-------------------------------------------~~~~~~~~~~LP~~a~~yi~~iEe~~gvpv~~ 322 (339)
T 2d7u_A 286 DKYDK-------------------------------------------EAFGVTDYDKLPRKAKEFIEEIEERVGVPVGL 322 (339)
T ss_dssp GGTCG-------------------------------------------GGTTCCSGGGSCHHHHHHHHHHHHHHSSCEEE
T ss_pred cccCC-------------------------------------------ccccceehHHCCHHHHHHHHHHHHHHCCCEEE
Confidence 99974 67899999999999999999999999999999
Q ss_pred EeeCCCcccccc
Q 015193 399 IGVGPGRDALIY 410 (411)
Q Consensus 399 is~Gp~r~~~i~ 410 (411)
||+||+|+|||.
T Consensus 323 is~GP~r~~ti~ 334 (339)
T 2d7u_A 323 IKTGPELEHIID 334 (339)
T ss_dssp EECSSBSSCEEE
T ss_pred EEeCCChHHeEE
Confidence 999999999875
No 8
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=33.81 E-value=1e+02 Score=32.29 Aligned_cols=163 Identities=11% Similarity=0.131 Sum_probs=96.8
Q ss_pred CCc-eeEecCCeEechHHHHHHHHHhHhCCCC------CCCceEEeCCceecchhHHHhhHHHHHHhcCC---C----cc
Q 015193 49 EDT-VCVIGNGVVVHLPGLFNEIDGLEANGVS------CKGRILVSDRAHLLFDFHQEIDGLREAELAKS---F----IG 114 (411)
Q Consensus 49 ~~~-~~~ig~GvVv~p~~l~~Ei~~L~~~g~~------~~~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~---~----iG 114 (411)
+.+ +.+|.|+++|---+=.++.++|+++|+. ..+=+||-.+--|-=-|-..++..+- .-+.. + -|
T Consensus 96 ~~APRVliaNsnlVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk-~~gg~L~G~~~lTaG 174 (557)
T 1uwk_A 96 SNAPRVLIANSNLVPHWANWEHFNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQ-HYGGSLKGKWVLTAG 174 (557)
T ss_dssp TTSCSEEEEESCBCGGGCSHHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHH-HTSSCCTTCEEEEEC
T ss_pred CCCCeEEEECCccCCCCCCHHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHH-hcCCCCCceEEEEec
Confidence 444 4789999999766777888999999973 22456777755332223333332211 11111 1 12
Q ss_pred CCCCcchhhhccccccCcceEeeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhcc----cccch
Q 015193 115 TTRRGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEP----FITDT 190 (411)
Q Consensus 115 TTgrGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d~ 190 (411)
--|+|=...-+-+++..-.=+.| .|++.+++|+++ . -+..-..++++.++...++.++=+| |+.++
T Consensus 175 LGGMgGAQplA~~mag~v~i~~E-vd~~ri~~R~~~------g---yld~~~~~ldeal~~~~~a~~~~~~~SIg~~GNa 244 (557)
T 1uwk_A 175 LGGMGGAQPLAATLAGACSLNIE-SQQSRIDFRLET------R---YVDEQATDLDDALVRIAKYTAEGKAISIALHGNA 244 (557)
T ss_dssp CSTTTTHHHHHHHHTTCEEEEEE-SCHHHHHHHHHT------T---SCCEECSSHHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCccchhhHHHHHHcCceEEEEE-ECHHHHHHHHhC------C---CceeEcCCHHHHHHHHHHHHHcCCceEEEEeccH
Confidence 22333222233333332122233 377777777653 1 1222234588888887777766666 47788
Q ss_pred HHHHHHHHHcCCcEEEEecccccccccCCCCC
Q 015193 191 VHFMNESIAQKRKILVEGGQATMLDIDFGTYP 222 (411)
Q Consensus 191 ~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP 222 (411)
.+++.+.+++|-.+=+---|=.+=|...|.||
T Consensus 245 adv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P 276 (557)
T 1uwk_A 245 AEILPELVKRGVRPDMVTDQTSAHDPLNGYLP 276 (557)
T ss_dssp HHHHHHHHHHTCCCSEECCCSCTTCTTTSCCC
T ss_pred HHHHHHHHHCCCCCCCCCCCccccCcccccCC
Confidence 88888888888766677788888888889999
No 9
>1hyw_A GPW, head-TO-tail joining protein W; novel fold, two helices, one two-stranded beta-sheet, viral protein; NMR {Enterobacteria phage lambda} SCOP: d.186.1.1 PDB: 2l6q_A 2l6r_A
Probab=32.51 E-value=1.1e+02 Score=23.30 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=31.0
Q ss_pred cccCCCCCcEEEeeeecCCCceeccCCcChhhhccCeEEEEEcCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCC
Q 015193 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVP 395 (411)
Q Consensus 319 DvL~~~~~ikIc~~Y~~~~g~~~~~~P~~~~~l~~~~pvY~~~~GW~~~~~~~~~~~~LP~~a~~yi~~ie~~~gvp 395 (411)
|+++|-..+ -++| ||+.+.+-.+++ .+.++||..||..+|..
T Consensus 16 ~L~tG~~~v--sV~y---dgr~V~Y~~asi------------------------------~~L~~~I~~le~~Lg~~ 57 (68)
T 1hyw_A 16 DLMTGKRVA--TVQK---DGRRVEFTATSV------------------------------SDLKKYIAELEVQTGMT 57 (68)
T ss_dssp HHTTSCCCE--EEEC---SSCEEEECTTTH------------------------------HHHHHHHHHHHHHTTTT
T ss_pred HHhcCCceE--EEEE---CCEEEEEecCCH------------------------------HHHHHHHHHHHHHhccc
Confidence 667665554 4466 788888777765 35689999999999883
No 10
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=31.94 E-value=98 Score=32.31 Aligned_cols=162 Identities=14% Similarity=0.154 Sum_probs=96.6
Q ss_pred CCc-eeEecCCeEechHHHHHHHHHhHhCCCC------CCCceEEeCCceecchhHHHhhHHHHHHhcCC---C----cc
Q 015193 49 EDT-VCVIGNGVVVHLPGLFNEIDGLEANGVS------CKGRILVSDRAHLLFDFHQEIDGLREAELAKS---F----IG 114 (411)
Q Consensus 49 ~~~-~~~ig~GvVv~p~~l~~Ei~~L~~~g~~------~~~rL~IS~rAhiv~p~H~~~D~~~E~~~g~~---~----iG 114 (411)
+.+ +.+|.|+++|---+=.++.++|+++|+. ..+=+||-.+--|-=-|-..++..+- .-+.. + -|
T Consensus 92 ~~APRVliaNsnlVp~wa~~e~f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk-~~gg~L~G~~~lTaG 170 (552)
T 2fkn_A 92 PQAPRVLLANSVLVPKWADWEHFHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQ-HFGGSLKGTLTLTAG 170 (552)
T ss_dssp TTSCSEEEEESCBCGGGCSHHHHHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHH-HSSSCCTTCEEEEEC
T ss_pred CCCCeEEEECCccCCCCCCHHHHHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHH-hcCCCCCceEEEEec
Confidence 444 5789999999766777888999999973 22456777755332223333332211 11111 1 12
Q ss_pred CCCCcchhhhccccccCcceE-eeCCCCCcHHHHHHHHHHHHHhhccCCCCCCCcHHHHHHHHHHHHHHhcc----cccc
Q 015193 115 TTRRGIGPAYSSKVIRNGIRV-CDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEP----FITD 189 (411)
Q Consensus 115 TTgrGIGpay~dk~~R~gir~-~DL~~~~~l~~kL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~i~d 189 (411)
--|+|=...-+-+++. ++-+ .| .|++.+++|+++ . -+..-..++++.++...++.++=+| |+.+
T Consensus 171 LGGMgGAQplA~~mag-~v~i~~E-vd~~ri~~R~~~------g---yld~~~~~ldeal~~~~~a~~~~~~~SIg~~GN 239 (552)
T 2fkn_A 171 LGGMGGAQPLSVTMNE-GVVIAVE-VDEKRIDKRIET------K---YCDRKTASIEEALAWAEEAKLAGKPLSIALLGN 239 (552)
T ss_dssp CSTTTTHHHHHHHHTT-CEEEEEE-SCHHHHHHHHHT------T---SCSEEESCHHHHHHHHHHHHHTTCCEEEEEESC
T ss_pred CCccchhhHHHHHHcC-ceEEEEE-ECHHHHHHHHhC------C---cceeEcCCHHHHHHHHHHHHHcCCceEEEEecc
Confidence 2233322223333333 2222 33 377777777653 1 1222234588888887777766666 4778
Q ss_pred hHHHHHHHHHcCCcEEEEecccccccccCCCCC
Q 015193 190 TVHFMNESIAQKRKILVEGGQATMLDIDFGTYP 222 (411)
Q Consensus 190 ~~~~l~~al~~gk~iLfEGaQG~lLDid~GtYP 222 (411)
..+++.+.+++|-.+=+---|=.+=|...|.||
T Consensus 240 aadv~~~l~~~~i~~DlvtDQTSaHdp~~GY~P 272 (552)
T 2fkn_A 240 AAEVHHTLLNRGVKIDIVTDQTSAHDPLIGYVP 272 (552)
T ss_dssp HHHHHHHHHTTTCCCSEECCCSCTTCTTTTCCC
T ss_pred HHHHHHHHHHCCCCCCCCCCCccccCcccccCC
Confidence 888888888887666677778888888889999
No 11
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=28.87 E-value=25 Score=31.87 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=26.1
Q ss_pred cCCC-CcchhhhccccccCcceEeeCCCCCcHHHHHHHHH
Q 015193 114 GTTR-RGIGPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLL 152 (411)
Q Consensus 114 GTTg-rGIGpay~dk~~R~gir~~DL~~~~~l~~kL~~~~ 152 (411)
|.+| +|||.+.+...++.|-++.=+...+...+.++++.
T Consensus 14 Gasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (266)
T 3oig_A 14 GVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELA 53 (266)
T ss_dssp CCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred cCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH
Confidence 6666 89999999999888888753322234445555544
No 12
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=24.30 E-value=1.1e+02 Score=27.35 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=26.7
Q ss_pred cCCC-CcchhhhccccccCcceEeeC-CCCCcH-HHHHHHHHHH
Q 015193 114 GTTR-RGIGPAYSSKVIRNGIRVCDL-RHMDTF-PQKLDLLLSD 154 (411)
Q Consensus 114 GTTg-rGIGpay~dk~~R~gir~~DL-~~~~~l-~~kL~~~~~~ 154 (411)
|.++ .|||-+.+....+.|.++.=+ .+.+.. .+.++.+...
T Consensus 27 Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~ 70 (267)
T 3gdg_A 27 GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT 70 (267)
T ss_dssp TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh
Confidence 6665 899999999888888887543 233323 4555555433
No 13
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.88 E-value=29 Score=31.41 Aligned_cols=24 Identities=21% Similarity=0.422 Sum_probs=19.8
Q ss_pred ccCCCCcchhhhccccccCcceEe
Q 015193 113 IGTTRRGIGPAYSSKVIRNGIRVC 136 (411)
Q Consensus 113 iGTTgrGIGpay~dk~~R~gir~~ 136 (411)
.|.+|+|||-+.+....+.|-++.
T Consensus 28 TGasg~GIG~~~a~~l~~~G~~V~ 51 (266)
T 3o38_A 28 TAAAGTGIGSTTARRALLEGADVV 51 (266)
T ss_dssp SSCSSSSHHHHHHHHHHHTTCEEE
T ss_pred ECCCCCchHHHHHHHHHHCCCEEE
Confidence 488889999999988888887764
No 14
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=22.56 E-value=39 Score=32.52 Aligned_cols=22 Identities=18% Similarity=0.440 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHhCCCeEEEe
Q 015193 379 KGAREFVERIEELVGVPINYIG 400 (411)
Q Consensus 379 ~~a~~yi~~ie~~~gvpv~~is 400 (411)
.|.+.|+++|++.+|.+|.+||
T Consensus 89 ~N~~~fl~~i~~~tG~~i~vIs 110 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNIDVEVID 110 (315)
T ss_dssp TTHHHHHHHHHHHHCCCEEECC
T ss_pred cCHHHHHHHHHHHHCCCeEEeC
Confidence 5899999999999999999997
Done!