RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 015193
(411 letters)
>gnl|CDD|178129 PLN02513, PLN02513, adenylosuccinate synthase.
Length = 427
Score = 798 bits (2063), Expect = 0.0
Identities = 317/392 (80%), Positives = 348/392 (88%)
Query: 20 AGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79
GGANAGHTIYN EGKKFALHLVPSGILNE T CVIGNGVVVHLPGLF EIDGLE+NGVS
Sbjct: 35 QGGANAGHTIYNDEGKKFALHLVPSGILNEKTTCVIGNGVVVHLPGLFEEIDGLESNGVS 94
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
C+GR+LVSDRAHLLFDFHQE+DGLREAELA S IGTT+RGIGPAYSSK RNG+RV DLR
Sbjct: 95 CEGRLLVSDRAHLLFDFHQEVDGLREAELAGSKIGTTKRGIGPAYSSKATRNGLRVGDLR 154
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIA 199
HMDTF +KL LL+DAAARF G +Y ++ EEVE YK+FAERLEPFITDTVH++NE+I
Sbjct: 155 HMDTFAEKLRELLADAAARFEGFEYDASMVEEEVEAYKKFAERLEPFITDTVHYLNEAIQ 214
Query: 200 QKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRV 259
+KILVEG QATMLDIDFGTYPFVTSS+PSAGGICTGLGIAPR +GD+IGVVKAYTTRV
Sbjct: 215 AGKKILVEGAQATMLDIDFGTYPFVTSSNPSAGGICTGLGIAPRKLGDIIGVVKAYTTRV 274
Query: 260 GSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLD 319
GSGPFPTE+FG+ GD LR AGQEFGTTTGRPRRCGWLD+VALKY CQING +SLNLTKLD
Sbjct: 275 GSGPFPTELFGELGDLLREAGQEFGTTTGRPRRCGWLDIVALKYSCQINGFTSLNLTKLD 334
Query: 320 VLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPK 379
VLS LPEI++GVAYK DG VKSFPADL LEQ++V YEVLPGWQ DISSVRNY DLP
Sbjct: 335 VLSGLPEIKIGVAYKTPDGKVVKSFPADLDTLEQVEVVYEVLPGWQEDISSVRNYDDLPA 394
Query: 380 GAREFVERIEELVGVPINYIGVGPGRDALIYK 411
A+ +VERIEELVGVP++YIGVGPGRDALI K
Sbjct: 395 AAQAYVERIEELVGVPVHYIGVGPGRDALIVK 426
>gnl|CDD|197875 smart00788, Adenylsucc_synt, Adenylosuccinate synthetase.
Adenylosuccinate synthetase plays an important role in
purine biosynthesis, by catalyzing the GTP-dependent
conversion of IMP and aspartic acid to AMP.
Adenylosuccinate synthetase has been characterized from
various sources ranging from Escherichia coli (gene
purA) to vertebrate tissues. In vertebrates, two
isozymes are present - one involved in purine
biosynthesis and the other in the purine nucleotide
cycle. The crystal structure of adenylosuccinate
synthetase from E. coli reveals that the dominant
structural element of each monomer of the homodimer is a
central beta-sheet of 10 strands. The first nine strands
of the sheet are mutually parallel with right-handed
crossover connections between the strands. The 10th
strand is antiparallel with respect to the first nine
strands. In addition, the enzyme has two antiparallel
beta-sheets, comprised of two strands and three strands
each, 11 alpha-helices and two short 3/10-helices.
Further, it has been suggested that the similarities in
the GTP-binding domains of the synthetase and the p21ras
protein are an example of convergent evolution of two
distinct families of GTP-binding proteins. Structures of
adenylosuccinate synthetase from Triticum aestivum and
Arabidopsis thaliana when compared with the known
structures from E. coli reveals that the overall fold is
very similar to that of the E. coli protein.
Length = 417
Score = 595 bits (1537), Expect = 0.0
Identities = 208/392 (53%), Positives = 262/392 (66%), Gaps = 7/392 (1%)
Query: 20 AGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79
GG NAGHT+ GKK+ LHL+PSGILN + VIGNGVV+ LF EI+ LEA GV
Sbjct: 32 QGGNNAGHTVV-VNGKKYKLHLLPSGILNPNKKNVIGNGVVIDPEALFKEIEELEAKGVD 90
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
K R+ +SDRAHL+ +H +D RE IGTT RGIGPAY KV R GIRV DL
Sbjct: 91 VKDRLFISDRAHLILPYHIALDKAREKAR----IGTTGRGIGPAYEDKVARRGIRVGDLF 146
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEV-EKYKRFAERLEPFITDTVHFMNESI 198
+ +KL+ LL L V EE+ E+ +AERL P++TD +NE++
Sbjct: 147 DEEVLREKLEELLDYKNFLLKKLYGAEPVDVEEILEELLEYAERLRPYVTDVSELLNEAL 206
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+K+L EG Q T+LDID GTYP+VTSS+ +AGG TG GI P + +IGVVKAYTTR
Sbjct: 207 KAGKKVLFEGAQGTLLDIDHGTYPYVTSSNTTAGGAATGAGIGPTRIDRVIGVVKAYTTR 266
Query: 259 VGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318
VG GPFPTE+F + G++LR G EFGTTTGRPRRCGW D V L+Y +ING++ L LTKL
Sbjct: 267 VGEGPFPTELFDETGEKLRERGHEFGTTTGRPRRCGWFDAVLLRYAVRINGITGLALTKL 326
Query: 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLP 378
DVL L EI++ VAYK DG + FPADL LE+ + YE LPGW+ D + VR+Y DLP
Sbjct: 327 DVLDGLDEIKVCVAYK-LDGKIIDYFPADLEDLERCEPIYEELPGWKEDTTGVRSYEDLP 385
Query: 379 KGAREFVERIEELVGVPINYIGVGPGRDALIY 410
+ A++++ERIEELVGVP++ I GP R+ I
Sbjct: 386 ENAKKYIERIEELVGVPVSIISTGPDREQTIV 417
>gnl|CDD|216073 pfam00709, Adenylsucc_synt, Adenylosuccinate synthetase.
Length = 420
Score = 584 bits (1508), Expect = 0.0
Identities = 212/390 (54%), Positives = 277/390 (71%), Gaps = 3/390 (0%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GG NAGHT+ +GKK+ LHL+PSGILN + VIGNGVVV L EI+ LE GV
Sbjct: 33 GGNNAGHTVV-VDGKKYKLHLLPSGILNPGVINVIGNGVVVDPEALLEEIEELEKKGVDV 91
Query: 81 KGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRH 140
R+ +SDRAHL+ +H+ +D LRE K IGTT RGIGPAY+ KV R GIRV DL
Sbjct: 92 LDRLFISDRAHLILPYHRALDRLREEARGKGKIGTTGRGIGPAYADKVARRGIRVGDLLD 151
Query: 141 MDTFPQKLDLLLSDAAARFPGLKYTPDVLREEV-EKYKRFAERLEPFITDTVHFMNESIA 199
+ +KL+ LL + A L + EE+ E+Y +AERL P+ITDT +N ++
Sbjct: 152 EEVLREKLEQLLEEKNAILEKLYGAEPLDVEEILEEYLEYAERLRPYITDTSELLNRALK 211
Query: 200 QKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRV 259
+ +K+L EG Q T+LDID GTYP+VTSS+ +AGG CTG GI PR + ++GVVKAYTTRV
Sbjct: 212 EGKKVLFEGAQGTLLDIDHGTYPYVTSSNTTAGGACTGSGIGPRKIDHVLGVVKAYTTRV 271
Query: 260 GSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLD 319
G GPFPTE+F + G++LR G EFGTTTGRPRRCGWLD+VAL+Y +ING++SL LTKLD
Sbjct: 272 GEGPFPTELFDELGEKLREKGHEFGTTTGRPRRCGWLDLVALRYAARINGVTSLALTKLD 331
Query: 320 VLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPK 379
VL L EI++ VAY+ +DG + FPA L LE+++ YE LPGW+ DI+ VR++ DLP+
Sbjct: 332 VLDGLDEIKVCVAYR-YDGKEIDYFPASLEDLEKVEPVYETLPGWKEDITGVRSFEDLPE 390
Query: 380 GAREFVERIEELVGVPINYIGVGPGRDALI 409
A+++++RIEELVGVP++ I VGP R+ I
Sbjct: 391 NAKKYIKRIEELVGVPVSLISVGPDREQTI 420
>gnl|CDD|239382 cd03108, AdSS, Adenylosuccinate synthetase (AdSS) catalyzes the
first step in the de novo biosynthesis of AMP. IMP and
L-aspartate are conjugated in a two-step reaction
accompanied by the hydrolysis of GTP to GDP in the
presence of Mg2+. In the first step, the r-phosphate
group of GTP is transferred to the 6-oxygen atom of IMP.
An aspartate then displaces this 6-phosphate group to
form the product adenylosuccinate. Because of its
critical role in purine biosynthesis, AdSS is a target
of antibiotics, herbicides and antitumor drugs.
Length = 363
Score = 568 bits (1466), Expect = 0.0
Identities = 212/384 (55%), Positives = 253/384 (65%), Gaps = 52/384 (13%)
Query: 20 AGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79
GG NAGHT+ GKKF LHL+PSGILN CVIGNGVV+ P LF EID LE G
Sbjct: 32 QGGNNAGHTVVV-NGKKFKLHLLPSGILNPGVTCVIGNGVVIDPPALFEEIDELEKKGGD 90
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
GR+ +SDRAHL+F +H +DGLRE K IGTT+RGIGPAY K R GIRV DL
Sbjct: 91 VTGRLFISDRAHLVFPYHILLDGLREEARGKKKIGTTKRGIGPAYEDKAARRGIRVGDL- 149
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIA 199
DT + +NE+I
Sbjct: 150 -------------------------------------------------DTSYLINEAIQ 160
Query: 200 QKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRV 259
+K+L EG Q T+LDIDFGTYPFVTSS+ +AGG CTGLGI PR +G +IGVVKAYTTRV
Sbjct: 161 AGKKVLFEGAQGTLLDIDFGTYPFVTSSNTTAGGACTGLGIPPRKIGRVIGVVKAYTTRV 220
Query: 260 GSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLD 319
GSGPFPTE+F + GD+LR AG EFGTTTGRPRRCGWLD+VALKY +ING++ L LTKLD
Sbjct: 221 GSGPFPTELFDETGDKLREAGHEFGTTTGRPRRCGWLDLVALKYAVRINGVTELALTKLD 280
Query: 320 VLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPK 379
VL L EI++ VAY+ DG + FPADL LE+++ YE LPGW+ DIS VR+Y DLP+
Sbjct: 281 VLDGLDEIKVCVAYE-LDGKEIDYFPADLEDLEKVEPVYETLPGWKEDISGVRSYDDLPE 339
Query: 380 GAREFVERIEELVGVPINYIGVGP 403
A+ +++RIEELVGVPI+ I VGP
Sbjct: 340 NAQNYIKRIEELVGVPISIISVGP 363
>gnl|CDD|240376 PTZ00350, PTZ00350, adenylosuccinate synthetase; Provisional.
Length = 436
Score = 566 bits (1461), Expect = 0.0
Identities = 213/394 (54%), Positives = 286/394 (72%), Gaps = 7/394 (1%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GGANAGHTI +GKK+ALHL+P GIL + + V+GNGVV+HLP L EI+ L G++
Sbjct: 46 GGANAGHTIV-VDGKKYALHLLPCGILYPNCINVLGNGVVIHLPSLLEEIEQLTKKGINL 104
Query: 81 KGRILVSDRAHLLFDFHQEIDGLREAELAKS--FIGTTRRGIGPAYSSKVIRNGIRVCDL 138
GR+ +SDRAHL+FD HQ IDG++E+E K IGTT+RGIGP YS+K R G+RV DL
Sbjct: 105 LGRLYISDRAHLVFDLHQAIDGIQESEKGKGGTQIGTTKRGIGPCYSTKASRTGLRVGDL 164
Query: 139 RHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESI 198
+ +TF +K L+ ++ +Y EE+E+YK +AE+L+ I DTV+FMN++I
Sbjct: 165 LNFETFEKKYRKLVEKLQEQYNIEEYD---AEEELERYKGYAEKLKDMIVDTVYFMNKAI 221
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+ +++LVEG ATMLDIDFGTYP+VTSS+ + GG+CTGLGI P + +IGVVKAYTTR
Sbjct: 222 KEGKRVLVEGANATMLDIDFGTYPYVTSSNTTVGGVCTGLGIPPNAIILVIGVVKAYTTR 281
Query: 259 VGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318
VG GPFPTE+F + GD LR G E+GTTTGRPRRCGWLD+ AL+Y ING S+NLTKL
Sbjct: 282 VGEGPFPTELFDENGDYLRKKGHEYGTTTGRPRRCGWLDIPALRYVQMINGFDSINLTKL 341
Query: 319 DVLSELPEIQLGVAYK-QFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDL 377
DVLS L EI++ V YK + G + +P+ + LE+ + YE +PGW++DIS + + +L
Sbjct: 342 DVLSGLKEIKICVNYKNKGTGLEIGRYPSSIEELEEYEPVYETMPGWKTDISKCKTFEEL 401
Query: 378 PKGAREFVERIEELVGVPINYIGVGPGRDALIYK 411
P+ A+++V IEEL+GVPI +IGVGP R+ +I K
Sbjct: 402 PENAQKYVLFIEELLGVPIVWIGVGPNRENMIVK 435
>gnl|CDD|234904 PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.
Length = 430
Score = 560 bits (1447), Expect = 0.0
Identities = 201/390 (51%), Positives = 261/390 (66%), Gaps = 3/390 (0%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GG NAGHT+ +GKK+ LHL+PSGIL CVIGNGVV+ L EID LEA GV
Sbjct: 35 GGHNAGHTLV-IDGKKYKLHLIPSGILRPGKTCVIGNGVVLDPEALLKEIDELEARGVDV 93
Query: 81 KGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRH 140
+ R+ +S+RAHL+ +H+ +D RE K IGTT RGIGPAY KV R GIRV DL
Sbjct: 94 RERLRISERAHLILPYHRALDKAREKARGKKKIGTTGRGIGPAYEDKVARRGIRVGDLLD 153
Query: 141 MDTFPQKLDLLLSDAAARFPGLKYTPDVLREEV-EKYKRFAERLEPFITDTVHFMNESIA 199
+TF +KL+ L V EE+ ++Y +AERL+P++TDT +N+++
Sbjct: 154 PETFAEKLEENLEYKNFLLTKYYGAEAVDFEEILDEYLEYAERLKPYVTDTSLLLNDALK 213
Query: 200 QKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRV 259
+++L EG Q T+LDID GTYPFVTSS+ +AGG TG G+ P + ++G+ KAYTTRV
Sbjct: 214 AGKRVLFEGAQGTLLDIDHGTYPFVTSSNTTAGGAATGSGVGPTKIDYVLGIAKAYTTRV 273
Query: 260 GSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLD 319
GSGPFPTE+F + G+ LR G EFGTTTGRPRRCGW D VAL+Y ++NGL+ L LTKLD
Sbjct: 274 GSGPFPTELFDEVGEHLRERGHEFGTTTGRPRRCGWFDAVALRYAVRVNGLTGLALTKLD 333
Query: 320 VLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPK 379
VL L EI++ VAY+ DG + FPA L L + + YE LPGW + VR++ DLP+
Sbjct: 334 VLDGLEEIKICVAYE-LDGKRIDYFPASLEDLARCEPIYEELPGWSESTTGVRSFDDLPE 392
Query: 380 GAREFVERIEELVGVPINYIGVGPGRDALI 409
AR++++RIEEL GVPI+ I GP RD I
Sbjct: 393 NARKYIKRIEELTGVPISIISTGPDRDQTI 422
>gnl|CDD|223182 COG0104, PurA, Adenylosuccinate synthase [Nucleotide transport and
metabolism].
Length = 430
Score = 518 bits (1336), Expect = 0.0
Identities = 196/388 (50%), Positives = 260/388 (67%), Gaps = 4/388 (1%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS- 79
GG NAGHT+ G+K+ LHL+PSGIL VIGNGVVV L EI+ LE GV
Sbjct: 35 GGHNAGHTV-VVNGEKYKLHLIPSGILRPGATLVIGNGVVVDPEVLLKEIEELEERGVDV 93
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
+ R+ +SDRAHL+ +H E+D RE L K IGTT RGIGPAY KV R GIRV DL
Sbjct: 94 VRDRLRISDRAHLILPYHIELDRAREKALGKKKIGTTGRGIGPAYEDKVARRGIRVGDLL 153
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEV-EKYKRFAERLEPFITDTVHFMNESI 198
+T +KL+ LL + V E++ ++Y +AERL+P++TD +N+++
Sbjct: 154 DPETLREKLERLLEYKNFQLVKYYGAEAVDFEDILDEYYEYAERLKPYVTDVSVLLNDAL 213
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+++L EG Q T+LDID GTYP+VTSS+ +AGG+ TG G+ P + +IGV KAYTTR
Sbjct: 214 DAGKRVLFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGVGPTKIDYVIGVFKAYTTR 273
Query: 259 VGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318
VG GPFPTE+F + G++LR G E+GTTTGRPRRCGW D V L+Y +ING++ L +TKL
Sbjct: 274 VGEGPFPTELFDEVGEKLREVGHEYGTTTGRPRRCGWFDAVLLRYAVRINGITGLAITKL 333
Query: 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLP 378
DVL L EI++ VAY+ DG + FPADL L + + YE LPGW D + V++Y DLP
Sbjct: 334 DVLDGLDEIKICVAYE-IDGKRIDYFPADLDDLARCEPIYETLPGWSEDTTGVKSYDDLP 392
Query: 379 KGAREFVERIEELVGVPINYIGVGPGRD 406
+ AR++++RIEELVGVP+ I GP R+
Sbjct: 393 ENARKYIKRIEELVGVPVTIISTGPERE 420
>gnl|CDD|232863 TIGR00184, purA, adenylosuccinate synthase. Alternate name
IMP--aspartate ligase [Purines, pyrimidines,
nucleosides, and nucleotides, Purine ribonucleotide
biosynthesis].
Length = 425
Score = 436 bits (1122), Expect = e-152
Identities = 186/391 (47%), Positives = 257/391 (65%), Gaps = 3/391 (0%)
Query: 20 AGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79
GG NAGHTI +G K+ LHL+PSG L D +IGNGVVV L E++ LE G+S
Sbjct: 30 QGGHNAGHTI-VIDGVKYGLHLIPSGFLYPDAKLLIGNGVVVDPEVLLKEMEYLEKRGIS 88
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
+ R+ VS R HL+ +H+++D RE IGTT +GIGPAY KV R+G+RV DL
Sbjct: 89 VRDRLFVSYRCHLILPYHKKLDKAREKSKLAKKIGTTGKGIGPAYEDKVARSGLRVGDLL 148
Query: 140 HMDTFPQKL-DLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESI 198
+ F +K ++L K +++++Y ++AE L+PF+ D +NE++
Sbjct: 149 DDEAFAEKAKNILEYLNEQLVKYYKDEGVDYEKKLDEYMKYAEELKPFVVDVSVELNEAL 208
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+ K+L EG Q TMLDID+GTYP+VTSS+ +AGG+ TG+GI P V ++IGV KAYTTR
Sbjct: 209 DEGEKVLFEGAQGTMLDIDYGTYPYVTSSNTTAGGVATGVGIGPTKVDEVIGVFKAYTTR 268
Query: 259 VGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318
VG+GPFPTE+ + G++L G EFGTTTGR RRCGW D+VA +Y C++NG + L LTKL
Sbjct: 269 VGAGPFPTELSDEEGEKLGTKGAEFGTTTGRRRRCGWFDLVAARYACRLNGATQLALTKL 328
Query: 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLP 378
DVL + EI++ VAY+ G ++ FP DL L+ ++ YE LPGW + + V YSDLP
Sbjct: 329 DVLDGIDEIKVCVAYR-MKGEILELFPLDLKDLKGVEPIYETLPGWDKECTGVTEYSDLP 387
Query: 379 KGAREFVERIEELVGVPINYIGVGPGRDALI 409
+ A++++ERIEEL GVP+ I GP R+ I
Sbjct: 388 ENAKKYIERIEELTGVPVTIISTGPEREQTI 418
>gnl|CDD|172324 PRK13787, PRK13787, adenylosuccinate synthetase; Provisional.
Length = 423
Score = 347 bits (891), Expect = e-117
Identities = 170/410 (41%), Positives = 252/410 (61%), Gaps = 7/410 (1%)
Query: 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVV 61
KAK +S + GGANAGHT+ GKK+ HLVPSG++ + T+CVIGNGVV+
Sbjct: 16 KAKVIDFLSKDTDIIVRYQGGANAGHTVV-VHGKKYVFHLVPSGVIYDQTICVIGNGVVL 74
Query: 62 HLPGLFNEIDGLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSF-IGTTRRGI 120
E D L+ G K ++L+SD HLLF +H +ID RE ++ IGTT++GI
Sbjct: 75 DPLFFIEECDRLQKEGFPVKDKLLLSDACHLLFPYHSQIDSARETTSSQEHKIGTTKKGI 134
Query: 121 GPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKY-KRF 179
G Y+ K++R G+RV DL ++ ++L L+ + L P V ++ K F
Sbjct: 135 GICYADKMMRTGLRVGDLLD-KSYKRRLKHLVDEKNRELDKLYGMPPVSYNDINDGLKFF 193
Query: 180 AERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLG 239
++ I +T ++++ + + +++L+EG Q T LD+DFGTYP+VTSS+P+ GG G G
Sbjct: 194 LSKVGKNIINTAYYLDTELKKGKRVLLEGAQGTGLDVDFGTYPYVTSSNPTTGGALIGTG 253
Query: 240 IAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVV 299
I+ + + +IG+ KAYTTRVG GPFPTE+ G+ G+ LR G EFG TTGRPRRCGW DV
Sbjct: 254 ISFQHLKHVIGITKAYTTRVGEGPFPTELLGEAGEVLRQKGGEFGATTGRPRRCGWFDVE 313
Query: 300 ALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYE 359
LK+ +ING++S+ LTK+D+LS+ I + V YK +G + FP+ LE+++ YE
Sbjct: 314 MLKHSVRINGITSIALTKIDILSDYDTIPVAVGYK-LNGKTLDCFPSQ--GLEKVEPLYE 370
Query: 360 VLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI 409
PGW+ DIS + + LP+ + ++ +E+ +GV IN + GP R I
Sbjct: 371 EFPGWKDDISGINEFQKLPEKCKNYISALEKWIGVKINLVSTGPDRKDTI 420
>gnl|CDD|184325 PRK13786, PRK13786, adenylosuccinate synthetase; Provisional.
Length = 424
Score = 345 bits (887), Expect = e-116
Identities = 169/394 (42%), Positives = 240/394 (60%), Gaps = 7/394 (1%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GG NAGHT+ + + + LHL+PSG L + V +IG GVV++ L EID LE +GV
Sbjct: 34 GGDNAGHTVKVGD-EVYKLHLIPSGFLLDARV-LIGPGVVLNPEVLAEEIDMLEKHGVKV 91
Query: 81 KGRIL-VSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
L + + ++ +H E+DGLRE+ + IGTT+RGIG AY K+ R+ +R+ DL
Sbjct: 92 DAEKLGIDAKTSIIMPYHIELDGLRESARTEK-IGTTKRGIGFAYIDKIARDEVRMSDLV 150
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKYTPDVLREE--VEKYKRFAERLEPFITDTVHFMNES 197
+ ++L+ L L P ++R+E ++KY +L P+ITD + +N++
Sbjct: 151 DKERLMRRLEELAPQKEKEIKELGGDPSIVRDEALIDKYLELGRQLAPYITDVSYEINKA 210
Query: 198 IAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTT 257
+ + + +L EG Q T LD+ GT FVTSSS AG C LG+ P V +++G+VKAY T
Sbjct: 211 LDEGKSVLAEGAQGTHLDVIHGTQKFVTSSSTIAGSACANLGVGPTRVDNVLGIVKAYIT 270
Query: 258 RVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTK 317
RVG GP PTE+ + G+ L+ G EFGTTTGRPRRCGW D+ LK +NG + + LTK
Sbjct: 271 RVGEGPLPTELKDEAGEHLQDVGGEFGTTTGRPRRCGWFDLPLLKKAIYLNGYTEIALTK 330
Query: 318 LDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDL 377
LDVL+ L I++ V Y+ DG + P L + YE L GW +D++ V+ Y DL
Sbjct: 331 LDVLTGLDPIKICVGYE-LDGEILDYPPELTSDLARCVPVYEELEGWSTDLTEVKAYEDL 389
Query: 378 PKGAREFVERIEELVGVPINYIGVGPGRDALIYK 411
P+ AR +VER+EEL+GVPI YI VGPGR+ K
Sbjct: 390 PENARNYVERLEELMGVPIKYISVGPGREQTFKK 423
>gnl|CDD|184326 PRK13788, PRK13788, adenylosuccinate synthetase; Provisional.
Length = 404
Score = 336 bits (862), Expect = e-113
Identities = 168/392 (42%), Positives = 231/392 (58%), Gaps = 37/392 (9%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GGANAGHT+ A+GK F L+L+PSG+L+ V+G+G+V+ E + L A G++
Sbjct: 35 GGANAGHTV-VAKGKTFKLNLLPSGVLHPHATSVLGDGMVIDPFRFAEERENLRAGGLN- 92
Query: 81 KGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRH 140
++L+S+RAHL+ H+ +DG K+F+GTT RGIGPAYS + R GIR DL
Sbjct: 93 -PKLLISERAHLVLPHHKYVDG------RKNFVGTTGRGIGPAYSDRARRVGIRFGDLLD 145
Query: 141 MDTFPQKLDLLLSDA--AARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESI 198
++++ LL + R G L E L PFI DT + E+I
Sbjct: 146 EAVLRERVERLLEAKPNSTREAGWDTVEKAL----ADLAPMREILLPFIADTGSLLREAI 201
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+ +++L EG QAT+LD+++GTYP+VTSS P+ GGI G G+ + + + GV KA+TTR
Sbjct: 202 REGKRVLFEGAQATLLDLNYGTYPYVTSSHPTVGGILVGAGVNHKAINKVYGVAKAFTTR 261
Query: 259 VGSGPFPTEIFGQGGDRLRLAG----QEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLN 314
VG GPFPTE+FG+ RLR G EFGTTTGR RR GWLD+V LKY C++NG L
Sbjct: 262 VGHGPFPTEVFGEMAIRLRGKGGNPWDEFGTTTGRARRVGWLDLVLLKYACEVNGFDGLV 321
Query: 315 LTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNY 374
LTKLDVLS L ++++ V Y DG PV Y+ LPGW D+ V++
Sbjct: 322 LTKLDVLSGLEKVKVCVEYDD-DGQPV----------------YKELPGW-GDLDGVKSR 363
Query: 375 SDLPKGAREFVERIEELVGVPINYIGVGPGRD 406
LPK A+ ++E IEE GVP+ P R+
Sbjct: 364 EALPKEAQAYLELIEETTGVPVVMFSTSPRRE 395
>gnl|CDD|237505 PRK13783, PRK13783, adenylosuccinate synthetase; Provisional.
Length = 404
Score = 312 bits (802), Expect = e-103
Identities = 153/385 (39%), Positives = 228/385 (59%), Gaps = 22/385 (5%)
Query: 20 AGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVS 79
+GGANAGHT+ + K HL+PS ++ IGNGVV+ L L E++ L+
Sbjct: 33 SGGANAGHTVNYGD-FKVVHHLLPSADFKKNVGAAIGNGVVLDLEVLVEELEELKEKFPD 91
Query: 80 CKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLR 139
GRI +S+ AH++ H+E+D + E + K+ IGTT+RGIGPAY+ KV+R G+R+ DL
Sbjct: 92 YSGRIFISELAHVVLPVHKELDEIIE-SVRKNAIGTTKRGIGPAYADKVMRVGVRLADLF 150
Query: 140 HMDTFPQKLDLLLSDAAARFPGLKY-TPDVLREEVEKYKRFAERLEPFITDTVHFMNESI 198
+ + L+ +LS + G+++ ++ + + Y E+++ + V +
Sbjct: 151 DEEKLREFLEKILS-LYKKLYGIEFDVEKMMEDLLTFY----EKIKDLVVSPVEIKRI-L 204
Query: 199 AQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTR 258
+K +L EG Q +LD+D GTYP+VTSS+ S G+ G+G P V ++IGV KAYTTR
Sbjct: 205 EEKS-VLFEGTQGVLLDLDVGTYPYVTSSNCSTTGVSAGMGF-PVKVDEVIGVFKAYTTR 262
Query: 259 VGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKL 318
VG GPFPTE+FG+ G++LR AG E+G TTGRPRRCGWLD+ L+Y +++G+ SL +TK
Sbjct: 263 VGEGPFPTELFGEEGEKLRKAGHEYGATTGRPRRCGWLDLPLLRYAIEVSGVDSLVMTKA 322
Query: 319 DVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLP 378
DVL+ +I++ V Y+ G P+ L LE+ + YE GW+S +N+
Sbjct: 323 DVLNGFEKIKVCVRYE--IGGKEVRDPSSLRDLEKAEPVYEEFDGWKSLED--KNFLK-- 376
Query: 379 KGAREFVERIEELVGVPINYIGVGP 403
FV+ IE G I YI GP
Sbjct: 377 -----FVDFIERETGRKIAYISTGP 396
>gnl|CDD|237506 PRK13785, PRK13785, adenylosuccinate synthetase; Provisional.
Length = 454
Score = 295 bits (756), Expect = 3e-96
Identities = 158/420 (37%), Positives = 235/420 (55%), Gaps = 36/420 (8%)
Query: 21 GGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSC 80
GG NAGHT+ G+++ L LVPSG + + V+GNG VV+ LF+EID L G+
Sbjct: 34 GGDNAGHTVV-HGGEEYKLSLVPSGAV-RGKIGVLGNGCVVNPETLFDEIDALRERGLDP 91
Query: 81 KGRILVSDRAHLLFDFHQEIDGLREAELAKSF--IGTTRRGIGPAYSSKVIRNGIRVCDL 138
R V++RAH++ +H+ +DG+ E + S +GTT RGIGP Y K R G+RV DL
Sbjct: 92 DVR--VAERAHVILPYHRVLDGIEEEAKSDSDLEVGTTGRGIGPTYEDKAGRRGVRVGDL 149
Query: 139 RHMDTFPQKLDLLLSDAAARFP---GLK--YTPDVLREE--VEKYKRFAERL--EPFITD 189
D +L+ ++ A GL TP+ + E+Y+ + ERL E +
Sbjct: 150 LDPDVLRDRLEYVVPQKRALAEDVYGLDASETPEAFDVDALFEEYREYGERLAEEDMTVN 209
Query: 190 TVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGD-- 247
F+ E I +++EG Q T +DID G YP+VTSS+P+AGG TG G+ P VVG
Sbjct: 210 AGDFLAERIDDGDNVMLEGAQGTSIDIDHGNYPYVTSSNPTAGGAATGTGLGPTVVGQGE 269
Query: 248 LIGVVKAYTTRVGSGPFPTEIFGQGGDR---------------LRLAGQEFGTTTGRPRR 292
++G+VKAY +RVGSGP PTE+ G GD +R G E+GT TGRPRR
Sbjct: 270 VVGIVKAYLSRVGSGPLPTELGGVEGDTPDEGGRPDEEELATYIREEGGEYGTVTGRPRR 329
Query: 293 CGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVKSFPADLLLLE 352
GWLD+ L++ + +G + L + +DVL+ L E+++G +Y + DG + + PA
Sbjct: 330 VGWLDMPMLRHAARASGFTGLAINHIDVLAGLDEVKVGHSY-ELDGEELLTMPATTERWA 388
Query: 353 QLKVEYEVLPGWQS-DISSV--RNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALI 409
+ + + GW D ++V Y LP+ AR ++E + + + PI +GVGPGR+ +
Sbjct: 389 RCEPNFRSFDGWPEVDWAAVAEEGYDALPENARTYLEYVSDELDTPIYAVGVGPGREETV 448
>gnl|CDD|172322 PRK13784, PRK13784, adenylosuccinate synthetase; Provisional.
Length = 428
Score = 273 bits (700), Expect = 3e-88
Identities = 153/413 (37%), Positives = 242/413 (58%), Gaps = 12/413 (2%)
Query: 2 KAKASSSISLPSTSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVV 61
K K + +++ + GG NAGHT+ GKK LHL+PSG+L++ T CVIG+GVV+
Sbjct: 16 KGKIADTLAEKADLVVRYQGGNNAGHTLV-VNGKKTFLHLIPSGVLHQHTKCVIGHGVVL 74
Query: 62 HLPGLFNEIDGLEANGVSCKGR-ILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGI 120
L EI L+A G++ + VS+ ++ +H+ +D +RE+ ++ IGTT +GI
Sbjct: 75 DPVALDEEITRLQAKGIAISAENLFVSESCTIITSYHKLLDAVRESNTSEK-IGTTGKGI 133
Query: 121 GPAYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAAARFPGL-KYTPDVLREEVEKYKRF 179
GPAY KV R GI+ L D +L + L++ F L K L +E +K
Sbjct: 134 GPAYEDKVSRKGIKFKHLFDKDLLRSRLAISLAEKETLFRDLYKVEYPTLEQEFDKLFAL 193
Query: 180 AERLEPFITDTVHFMNESIAQKRKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLG 239
++L+ + DT ++++IA + ++ EG Q +LD+D+GTYPFVTSS+ S G+ +G
Sbjct: 194 GQKLKQYAADTFSIIDQAIAAGKNVVYEGAQGVLLDVDYGTYPFVTSSNTSVAGVYSGAT 253
Query: 240 IAPRVVGDLIGVVKAYTTRVGSGPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVV 299
A + +IG+ KAYTTRVG GPFPTE+F G ++ G E G TTGR RRCGWLD+
Sbjct: 254 TAGHGLDHVIGITKAYTTRVGEGPFPTELFDDVGKFIQHKGGEIGVTTGRIRRCGWLDLP 313
Query: 300 ALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAYKQFDGTPVK-SFPA-DLLLLEQLKVE 357
LKY + + L+S+ LTK+DVLS++ +++ + YK ++G + ++P DL +E + VE
Sbjct: 314 LLKYSAKCSNLTSIALTKVDVLSDMDTLKVCIGYK-YEGKEIYCAYPGIDLYKVEPILVE 372
Query: 358 YEVLPGWQSDISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDALIY 410
E I ++P + +++ IE VG+PI+ + GP R+ +++
Sbjct: 373 MEPF-----SIDETVTKDNMPAALKTYLKTIENHVGIPISSLAYGPSREQILF 420
>gnl|CDD|179812 PRK04293, PRK04293, adenylosuccinate synthetase; Provisional.
Length = 333
Score = 211 bits (540), Expect = 2e-65
Identities = 120/382 (31%), Positives = 171/382 (44%), Gaps = 95/382 (24%)
Query: 22 GANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLFNEIDGLEANGVSCK 81
G NAGHT+ GKK+ L ++PSG +N+D IG GV+V L E++ L
Sbjct: 38 GPNAGHTV-EYNGKKYGLRMIPSGFVNKDAKLAIGAGVLVDPEVLLKEVEELN-----VG 91
Query: 82 GRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRNGIRVCDLRHM 141
GR+ V R ++ + H E D R E IG+T G GPA + +V+R
Sbjct: 92 GRVFVDYRCGIIEEKHVEED--RSDEHLSKKIGSTGTGCGPANADRVLRR---------- 139
Query: 142 DTFPQKLDLLLSDAAARFPGLKYTPDVLREEVEKYKRFAERLEPFITDTVHFMNESIAQK 201
LK DV E LE ++TD +NE++ +
Sbjct: 140 --------------------LKLAKDV------------EELEKYLTDVPEEVNEALDRG 167
Query: 202 RKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGS 261
+L+EG Q L + +GTYP+VTS +A GI + +G+ P V ++I V K+Y TRVG
Sbjct: 168 ENVLIEGTQGFGLSLYYGTYPYVTSKDTTASGIASDVGVGPTKVDEVIVVFKSYPTRVGE 227
Query: 262 GPFPTEIFGQGGDRLRLAGQEFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVL 321
GPFPTE+ + ++L L E+GT TGR RR G D + +ING + + +TKLD L
Sbjct: 228 GPFPTELSLEEAEKLGLV--EYGTVTGRRRRVGPFDFELARRAARINGATQIAITKLDKL 285
Query: 322 SELPEIQLGVAYKQFDGTPVKSFPADLLLLEQLKVEYEVLPGWQSDISSVRNYSDLPKGA 381
+ V Y LP A
Sbjct: 286 ----------------------DK---------------------EAYGVTEYDKLPPEA 302
Query: 382 REFVERIEELVGVPINYIGVGP 403
++F+E IEE +GVP+ I GP
Sbjct: 303 KKFIEEIEEELGVPVTLISTGP 324
>gnl|CDD|173544 PTZ00351, PTZ00351, adenylosuccinate synthetase; Provisional.
Length = 710
Score = 57.0 bits (137), Expect = 9e-09
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 50/298 (16%)
Query: 14 TSTSLLAGGANAGHTIYNAEGKKFALHLVPSGILNEDTVCVIGNGVVVHLPGLF--NEID 71
T + + G NAGHT+Y+ G+KF +L PSG+L IG V+ P F EI
Sbjct: 198 TCIARVNSGENAGHTVYDKAGRKFVFNLAPSGLLLPGKRNYIGPECVMD-PVSFMEKEII 256
Query: 72 GLEANGVSCKGRILVSDRAHLLFDFHQEIDGLREAELAKSFIGTTRRGIGPAYSSKVIRN 131
L G+ + R+ + + ++ +H+ +D L A A S +T +G+ P + SKV++
Sbjct: 257 QLIDAGIDYRDRLFIGNVC-IVTPYHKLLDLLGSA--ANS---STLKGMAPVHGSKVMKR 310
Query: 132 GIRVCDL------------RHMDTFPQKLDLL----LSDA-AARF------PGLKYTPDV 168
GIR+ + + MDT+ L LL LSDA R G+ PD
Sbjct: 311 GIRLDHIFNDDETLRKRLEKDMDTY---LGLLKVKNLSDADVVRLCREENSDGVVRVPDY 367
Query: 169 L------REEVE-KYKRFAERLE-----PFITDTVHFMNESIAQKRKILVEGGQATML-D 215
+ +++VE K + +R+ P D + ++ ++ + K+L+EG Q+ L +
Sbjct: 368 VIAFAQAKDKVEFLVKLYRDRVRHNPDFPARCDVTYELHAAVLRGEKVLLEGPQSYWLSN 427
Query: 216 IDFGTYPFVTSSSPSAGGICTGLGIA-PRVVGDLIGVVKAY-TTRVGSGPFPTEIFGQ 271
+ TS+ +A G+ + + ++ V KA ++RVG G P+ Q
Sbjct: 428 ARTKFWESTTSADTTAAGLLAASQLNFQKFKSVVLNVHKAPGSSRVGIGACPSSFVPQ 485
Score = 45.4 bits (107), Expect = 4e-05
Identities = 44/153 (28%), Positives = 62/153 (40%), Gaps = 29/153 (18%)
Query: 282 EFGTTTGRPRRCGWLDVVALKYCCQINGLSSLNLTKLDVLSELPEIQLGVAY-------K 334
E G T +PR CG+ D V I G L ++ LD E ++ + +AY K
Sbjct: 560 ECGAVTKKPRVCGFFDCVLQHEVNSIQG-PYLTISALDRGDEYDKVGVTIAYVYYNPEGK 618
Query: 335 QFD--------------GTPVKSFPADLLLLEQLKVEYEVLPGWQSD---ISSVRNYSDL 377
Q D G PV S PA L +++ GW+ + + R + L
Sbjct: 619 QVDVNGHVYKNGDIIRAGDPVPSEPA----LYHCHPIVKLIDGWRDNPIAAAKRRRNAPL 674
Query: 378 PKGAREFVERIEELVGVPINYIGVGPGRDALIY 410
P+G E + IE I IG GP D +IY
Sbjct: 675 PRGVCELLSTIEYFTNCKILSIGNGPNGDDIIY 707
>gnl|CDD|181779 PRK09326, PRK09326, F420H2 dehydrogenase subunit F; Provisional.
Length = 341
Score = 32.5 bits (74), Expect = 0.38
Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 15/117 (12%)
Query: 100 IDGLREAEL--------AKSFIGTTRRGIGPAYSSKVIRNGIRVC--DLRHMDTFPQKLD 149
+DG E EL A+S IG G+ A +++ G C + + + +L
Sbjct: 68 VDGYIEDELANVRKFFGARSNIGGQDGGVTSAILKSLLKQGEIDCAVGITRNEKWETELV 127
Query: 150 LLLS-DAAARFPGLKYTPD----VLREEVEKYKRFAERLEPFITDTVHFMNESIAQK 201
LL S + R G KYT D LRE EKY R A P + E++ K
Sbjct: 128 LLTSAEDVERTRGTKYTYDSVLSALREPFEKYDRIAVIGVPCQAHGARLIRENVNDK 184
>gnl|CDD|112835 pfam04036, DUF372, Domain of unknown function (DUF372). Domain of
unknown function.
Length = 38
Score = 26.9 bits (60), Expect = 2.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 327 IQLGVAYKQFDGTPVKSFPADLL 349
I+LG Y QF GTPV A L
Sbjct: 9 IKLGALYHQFVGTPVSPETASSL 31
>gnl|CDD|233337 TIGR01273, speA, arginine decarboxylase, biosynthetic. Two
alternative pathways can convert arginine to putrescine.
One is decarboxylation by this enzyme followed by
removal of the urea moeity by agmatinase. In the other,
the ureohydrolase (arginase) acts first, followed by
ornithine decarboxylase. This pathway leads to
spermidine biosynthesis, hence the gene symbol speA. A
distinct biodegradative form is also pyridoxal
phosphate-dependent but is not similar in sequence
[Central intermediary metabolism, Polyamine
biosynthesis].
Length = 624
Score = 29.2 bits (66), Expect = 4.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 366 SDISSVRNYSDLPKGAREFVERIEELV--GVPINYIGVGPG 404
S IS++ D+ KG RE EL GV I Y+ VG G
Sbjct: 248 SQISNID---DIKKGVREAARFYCELRKLGVKITYVDVGGG 285
>gnl|CDD|180367 PRK06046, PRK06046, alanine dehydrogenase; Validated.
Length = 326
Score = 28.5 bits (64), Expect = 7.6
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 367 DISSVRNYSDLPKGAREFVERIEELVGVPINYIGVGPGRDA 407
D+ VR Y A +FVER+ +VG + +A
Sbjct: 153 DLEEVRVYDRTKSSAEKFVERMSSVVGCDVTV--AEDIEEA 191
>gnl|CDD|173171 PRK14708, PRK14708, flagellin; Provisional.
Length = 888
Score = 28.3 bits (63), Expect = 8.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 212 TMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGD 247
T L ++ T F TS +P I TG G+ R+ D
Sbjct: 339 TTLTVNGKTITFKTSDAPQGNNILTGSGVLGRIGTD 374
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.140 0.412
Gapped
Lambda K H
0.267 0.0847 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,749,263
Number of extensions: 2212180
Number of successful extensions: 2213
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2148
Number of HSP's successfully gapped: 35
Length of query: 411
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 312
Effective length of database: 6,546,556
Effective search space: 2042525472
Effective search space used: 2042525472
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (26.7 bits)