Query 015196
Match_columns 411
No_of_seqs 153 out of 1663
Neff 10.4
Searched_HMMs 13730
Date Mon Mar 25 08:22:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015196.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015196hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fz4a1 c.37.1.19 (A:24-229) D 99.9 5E-27 3.7E-31 198.0 17.1 143 19-182 64-206 (206)
2 d2bmfa2 c.37.1.14 (A:178-482) 99.9 1.2E-26 8.8E-31 209.0 15.2 248 44-362 10-290 (305)
3 d1rifa_ c.37.1.23 (A:) DNA hel 99.9 5E-26 3.6E-30 200.4 13.5 162 23-198 111-279 (282)
4 d1wp9a1 c.37.1.19 (A:1-200) pu 99.9 2.6E-23 1.9E-27 174.9 11.5 151 24-186 8-171 (200)
5 d2fwra1 c.37.1.19 (A:257-456) 99.9 2.2E-23 1.6E-27 174.9 10.6 123 249-386 77-199 (200)
6 d1s2ma2 c.37.1.19 (A:252-422) 99.8 2.5E-20 1.8E-24 151.5 14.6 118 250-385 17-139 (171)
7 d1t5ia_ c.37.1.19 (A:) Spliceo 99.8 3.7E-20 2.7E-24 149.7 13.6 107 250-361 12-123 (168)
8 d2p6ra3 c.37.1.19 (A:1-202) He 99.8 6E-21 4.4E-25 160.3 9.0 147 25-183 25-184 (202)
9 d1fuka_ c.37.1.19 (A:) Initiat 99.8 2.7E-20 1.9E-24 149.4 11.9 106 251-361 13-123 (162)
10 d2j0sa2 c.37.1.19 (A:244-411) 99.8 9.6E-20 7E-24 147.0 14.6 116 252-385 21-141 (168)
11 d1c4oa2 c.37.1.19 (A:410-583) 99.8 9.6E-20 7E-24 145.3 14.4 94 267-361 30-132 (174)
12 d1hv8a2 c.37.1.19 (A:211-365) 99.8 1.9E-19 1.4E-23 143.8 14.6 105 251-361 15-124 (155)
13 d1gm5a3 c.37.1.19 (A:286-549) 99.8 1.2E-19 8.9E-24 155.3 13.0 151 22-185 80-245 (264)
14 d1z63a1 c.37.1.19 (A:432-661) 99.8 3.8E-19 2.8E-23 152.3 16.0 150 24-187 11-168 (230)
15 d1a1va1 c.37.1.14 (A:190-325) 99.8 1.5E-19 1.1E-23 141.6 12.3 122 44-181 9-136 (136)
16 d2eyqa3 c.37.1.19 (A:546-778) 99.8 4E-19 2.9E-23 149.2 15.5 150 21-183 51-215 (233)
17 d1oywa2 c.37.1.19 (A:1-206) Re 99.8 3.2E-20 2.3E-24 156.4 8.7 144 25-183 25-186 (206)
18 d1oywa3 c.37.1.19 (A:207-406) 99.8 4.5E-19 3.3E-23 146.9 14.5 105 252-361 17-126 (200)
19 d1t5la2 c.37.1.19 (A:415-595) 99.8 4.4E-19 3.2E-23 143.9 12.9 94 267-361 30-132 (181)
20 d1gkub1 c.37.1.16 (B:1-250) He 99.8 1.3E-19 9.5E-24 156.0 9.1 146 24-184 42-217 (237)
21 d2rb4a1 c.37.1.19 (A:307-474) 99.8 7.6E-19 5.5E-23 141.7 12.9 117 253-386 20-146 (168)
22 d1z3ix2 c.37.1.19 (X:92-389) R 99.8 9.5E-19 6.9E-23 155.7 13.9 152 24-187 54-236 (298)
23 d2j0sa1 c.37.1.19 (A:22-243) P 99.8 1.4E-18 1E-22 146.5 10.8 148 24-182 38-201 (222)
24 d1hv8a1 c.37.1.19 (A:3-210) Pu 99.8 1.2E-18 8.5E-23 146.4 9.9 148 25-182 26-187 (208)
25 d2g9na1 c.37.1.19 (A:21-238) I 99.7 3.1E-18 2.3E-22 144.4 10.2 148 25-183 34-198 (218)
26 d1wp9a2 c.37.1.19 (A:201-486) 99.7 4.3E-18 3.2E-22 150.6 11.0 126 251-392 143-282 (286)
27 d1yksa1 c.37.1.14 (A:185-324) 99.7 2.3E-18 1.7E-22 135.4 8.2 124 44-182 8-140 (140)
28 d1veca_ c.37.1.19 (A:) DEAD bo 99.7 9E-18 6.6E-22 140.5 10.7 147 25-182 25-188 (206)
29 d1wrba1 c.37.1.19 (A:164-401) 99.7 2.2E-17 1.6E-21 141.1 12.3 165 7-182 23-218 (238)
30 d1t6na_ c.37.1.19 (A:) Spliceo 99.7 2.1E-17 1.5E-21 138.3 11.4 149 24-183 22-189 (207)
31 d2p6ra4 c.37.1.19 (A:203-403) 99.7 5.4E-17 4E-21 134.6 12.6 106 267-385 39-186 (201)
32 d2eyqa5 c.37.1.19 (A:779-989) 99.7 1.5E-16 1.1E-20 129.5 14.5 130 256-401 21-157 (211)
33 d1qdea_ c.37.1.19 (A:) Initiat 99.7 2.4E-17 1.7E-21 138.4 10.1 148 24-182 31-193 (212)
34 d1z3ix1 c.37.1.19 (X:390-735) 99.7 2.3E-16 1.7E-20 141.6 16.0 134 250-395 100-240 (346)
35 d1z5za1 c.37.1.19 (A:663-906) 99.7 1.1E-16 8.2E-21 137.8 12.9 131 251-394 69-206 (244)
36 d1s2ma1 c.37.1.19 (A:46-251) P 99.6 7.7E-16 5.6E-20 128.8 11.8 148 24-182 22-185 (206)
37 d1gm5a4 c.37.1.19 (A:550-755) 99.6 3.7E-16 2.7E-20 128.5 5.6 130 255-403 18-163 (206)
38 d1jr6a_ c.37.1.14 (A:) HCV hel 99.6 1.2E-15 8.7E-20 117.6 8.0 84 268-361 35-126 (138)
39 d1q0ua_ c.37.1.19 (A:) Probabl 99.6 1.2E-15 8.9E-20 128.2 5.9 147 25-182 23-189 (209)
40 d1gkub2 c.37.1.16 (B:251-498) 99.4 1.3E-14 9.5E-19 124.9 0.7 101 250-361 11-116 (248)
41 d1a1va2 c.37.1.14 (A:326-624) 99.3 5E-13 3.6E-17 113.5 5.4 91 268-361 36-144 (299)
42 d1tf5a4 c.37.1.19 (A:396-570) 99.0 2E-09 1.4E-13 84.1 12.1 132 255-403 23-167 (175)
43 d1yksa2 c.37.1.14 (A:325-623) 98.8 4.6E-09 3.4E-13 90.8 9.5 88 268-361 36-146 (299)
44 d1tf5a3 c.37.1.19 (A:1-226,A:3 98.4 5.2E-07 3.8E-11 74.9 10.4 150 25-183 78-254 (273)
45 d1w36d1 c.37.1.19 (D:2-360) Ex 98.4 3.3E-07 2.4E-11 81.7 9.5 144 24-182 147-298 (359)
46 d1nkta4 c.37.1.19 (A:397-615) 98.4 2.2E-06 1.6E-10 67.9 13.1 102 254-361 22-180 (219)
47 d1nkta3 c.37.1.19 (A:-15-225,A 98.3 1.9E-06 1.4E-10 71.8 9.9 149 26-183 96-269 (288)
48 d1t5la1 c.37.1.19 (A:2-414) Nu 98.1 3.7E-06 2.7E-10 75.7 8.8 77 17-93 3-81 (413)
49 d1a5ta2 c.37.1.20 (A:1-207) de 97.9 6.2E-05 4.5E-09 61.2 12.0 44 24-67 1-48 (207)
50 d1uaaa1 c.37.1.19 (A:2-307) DE 97.9 1.1E-05 7.6E-10 70.4 7.6 64 25-93 1-71 (306)
51 d1pjra1 c.37.1.19 (A:1-318) DE 97.6 7.9E-05 5.7E-09 65.0 8.2 63 25-92 11-80 (318)
52 d2gnoa2 c.37.1.20 (A:11-208) g 97.6 0.00025 1.8E-08 56.9 10.4 48 30-77 2-55 (198)
53 d1c4oa1 c.37.1.19 (A:2-409) Nu 97.3 0.00055 4E-08 61.3 9.7 69 25-93 8-78 (408)
54 d1sxjb2 c.37.1.20 (B:7-230) Re 97.1 0.0013 9.4E-08 53.8 9.6 41 28-68 21-61 (224)
55 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 97.1 0.00049 3.6E-08 65.7 7.9 65 25-94 11-82 (623)
56 d1njfa_ c.37.1.20 (A:) delta p 97.0 0.0035 2.5E-07 51.7 12.0 37 31-67 21-58 (239)
57 d1e32a2 c.37.1.20 (A:201-458) 96.9 0.0012 8.8E-08 55.3 8.2 35 42-76 37-71 (258)
58 d1jbka_ c.37.1.20 (A:) ClpB, A 96.9 0.0032 2.3E-07 49.6 10.0 41 25-65 25-65 (195)
59 d1ixza_ c.37.1.20 (A:) AAA dom 96.9 0.00084 6.1E-08 55.8 6.6 35 42-76 41-75 (247)
60 d1l8qa2 c.37.1.20 (A:77-289) C 96.8 0.0073 5.3E-07 48.7 11.6 62 24-86 12-81 (213)
61 d1sxje2 c.37.1.20 (E:4-255) Re 96.7 0.00062 4.5E-08 56.9 4.5 41 27-67 16-57 (252)
62 d2qy9a2 c.37.1.10 (A:285-495) 96.6 0.0069 5.1E-07 48.4 10.0 33 44-76 10-45 (211)
63 d1vmaa2 c.37.1.10 (A:82-294) G 96.6 0.016 1.1E-06 46.4 12.0 51 43-93 11-66 (213)
64 d1xx6a1 c.37.1.24 (A:2-142) Th 96.4 0.0069 5E-07 45.0 8.1 34 46-79 10-46 (141)
65 d1qvra3 c.37.1.20 (A:536-850) 96.3 0.0016 1.2E-07 56.2 5.0 32 139-170 119-150 (315)
66 d1ls1a2 c.37.1.10 (A:89-295) G 96.3 0.014 9.9E-07 46.6 10.1 50 45-94 12-66 (207)
67 d1r6bx2 c.37.1.20 (X:169-436) 96.1 0.082 6E-06 43.7 14.5 42 25-66 21-62 (268)
68 d1ofha_ c.37.1.20 (A:) HslU {H 96.1 0.0026 1.9E-07 54.7 5.2 35 42-76 48-82 (309)
69 d1in4a2 c.37.1.20 (A:17-254) H 96.0 0.0067 4.9E-07 49.8 7.0 35 42-76 34-68 (238)
70 d1g41a_ c.37.1.20 (A:) HslU {H 95.8 0.0043 3.1E-07 56.0 5.3 36 43-78 49-84 (443)
71 d1gvnb_ c.37.1.21 (B:) Plasmid 95.7 0.0037 2.7E-07 52.5 4.2 34 43-76 32-65 (273)
72 d1okkd2 c.37.1.10 (D:97-303) G 95.6 0.014 1E-06 46.5 7.0 51 44-94 7-62 (207)
73 d1gm5a3 c.37.1.19 (A:286-549) 95.6 0.023 1.7E-06 47.0 8.6 84 267-354 131-224 (264)
74 d2b8ta1 c.37.1.24 (A:11-149) T 95.5 0.058 4.2E-06 39.7 9.8 34 46-79 5-41 (139)
75 d1tf7a2 c.37.1.11 (A:256-497) 95.5 0.061 4.5E-06 43.7 11.0 111 33-159 14-130 (242)
76 d1d2na_ c.37.1.20 (A:) Hexamer 95.4 0.0058 4.2E-07 50.5 4.4 34 42-75 39-72 (246)
77 d1w44a_ c.37.1.11 (A:) NTPase 95.4 0.0034 2.5E-07 53.8 2.8 23 46-68 126-148 (321)
78 d1lv7a_ c.37.1.20 (A:) AAA dom 95.4 0.0072 5.2E-07 50.2 4.8 36 42-77 44-79 (256)
79 d1ixsb2 c.37.1.20 (B:4-242) Ho 95.4 0.018 1.3E-06 47.1 7.3 34 42-75 34-67 (239)
80 d1qvra2 c.37.1.20 (A:149-535) 95.3 0.047 3.4E-06 47.9 10.2 41 25-65 25-65 (387)
81 d1xbta1 c.37.1.24 (A:18-150) T 95.3 0.034 2.5E-06 40.7 7.7 34 46-79 5-41 (133)
82 d1um8a_ c.37.1.20 (A:) ClpX {H 95.2 0.013 9.3E-07 51.3 6.1 33 42-74 67-99 (364)
83 d2eyqa3 c.37.1.19 (A:546-778) 95.2 0.065 4.7E-06 43.2 10.0 94 247-342 84-187 (233)
84 d1fnna2 c.37.1.20 (A:1-276) CD 95.2 0.017 1.2E-06 48.0 6.8 45 24-68 18-68 (276)
85 d1sxja2 c.37.1.20 (A:295-547) 95.2 0.021 1.5E-06 47.1 7.1 34 43-76 52-85 (253)
86 d1iqpa2 c.37.1.20 (A:2-232) Re 95.1 0.014 1E-06 47.4 5.8 40 28-67 30-69 (231)
87 d1sxjc2 c.37.1.20 (C:12-238) R 95.1 0.014 9.9E-07 47.4 5.6 41 27-67 19-59 (227)
88 d1sxjd2 c.37.1.20 (D:26-262) R 94.9 0.015 1.1E-06 47.5 5.3 41 27-67 17-57 (237)
89 d1j8yf2 c.37.1.10 (F:87-297) G 94.8 0.032 2.4E-06 44.4 6.9 51 44-94 13-68 (211)
90 d1u94a1 c.37.1.11 (A:6-268) Re 94.6 0.11 8.3E-06 42.7 10.1 54 32-85 40-99 (263)
91 d1kaga_ c.37.1.2 (A:) Shikimat 94.4 0.017 1.2E-06 43.8 4.2 28 44-71 3-30 (169)
92 d1g6oa_ c.37.1.11 (A:) Hexamer 94.3 0.027 2E-06 48.2 5.7 49 30-80 155-205 (323)
93 d1r7ra3 c.37.1.20 (A:471-735) 94.2 0.017 1.2E-06 48.2 4.1 35 42-76 40-74 (265)
94 d1xp8a1 c.37.1.11 (A:15-282) R 94.2 0.16 1.1E-05 41.9 10.1 53 33-85 44-102 (268)
95 d1svma_ c.37.1.20 (A:) Papillo 94.1 0.031 2.2E-06 48.8 5.7 43 33-75 143-186 (362)
96 d1rkba_ c.37.1.1 (A:) Adenylat 94.0 0.021 1.5E-06 43.7 4.0 28 45-72 6-33 (173)
97 d1r6bx3 c.37.1.20 (X:437-751) 93.9 0.032 2.3E-06 47.7 5.5 30 45-74 54-83 (315)
98 d1p9ra_ c.37.1.11 (A:) Extrace 93.9 0.034 2.5E-06 49.3 5.7 52 24-76 140-194 (401)
99 d1mo6a1 c.37.1.11 (A:1-269) Re 93.9 0.12 8.7E-06 42.7 8.8 56 32-87 46-107 (269)
100 d1w5sa2 c.37.1.20 (A:7-293) CD 93.7 0.021 1.5E-06 47.8 3.8 46 22-67 16-70 (287)
101 d1zp6a1 c.37.1.25 (A:6-181) Hy 93.5 0.028 2E-06 43.2 4.0 31 45-75 6-36 (176)
102 d2bdta1 c.37.1.25 (A:1-176) Hy 93.5 0.029 2.1E-06 42.8 4.1 26 45-70 4-29 (176)
103 d1w36b1 c.37.1.19 (B:1-485) Ex 93.3 0.057 4.1E-06 48.9 6.3 51 42-92 15-80 (485)
104 d1lw7a2 c.37.1.1 (A:220-411) T 93.2 0.027 2E-06 43.6 3.5 29 44-72 8-36 (192)
105 d1ny5a2 c.37.1.20 (A:138-384) 93.1 0.23 1.7E-05 40.4 9.2 38 44-81 24-63 (247)
106 d2eyqa5 c.37.1.19 (A:779-989) 92.9 0.27 1.9E-05 38.6 8.9 101 65-181 28-141 (211)
107 d1qhxa_ c.37.1.3 (A:) Chloramp 92.8 0.055 4E-06 41.3 4.8 30 45-74 5-34 (178)
108 d2i3ba1 c.37.1.11 (A:1-189) Ca 92.8 0.033 2.4E-06 43.0 3.4 24 44-67 2-25 (189)
109 d1y63a_ c.37.1.1 (A:) Probable 92.5 0.063 4.6E-06 40.9 4.7 29 44-72 6-34 (174)
110 d1e6ca_ c.37.1.2 (A:) Shikimat 92.5 0.051 3.7E-06 41.6 4.1 28 45-72 4-31 (170)
111 d1pzna2 c.37.1.11 (A:96-349) D 92.4 0.15 1.1E-05 41.5 7.2 57 33-89 24-91 (254)
112 d1knqa_ c.37.1.17 (A:) Glucona 92.4 0.053 3.9E-06 41.3 4.1 28 44-71 7-34 (171)
113 d1ly1a_ c.37.1.1 (A:) Polynucl 92.4 0.057 4.1E-06 40.2 4.1 24 45-68 4-27 (152)
114 d1viaa_ c.37.1.2 (A:) Shikimat 92.3 0.054 3.9E-06 41.1 3.9 28 45-72 2-29 (161)
115 d1zaka1 c.37.1.1 (A:3-127,A:15 92.0 0.051 3.7E-06 42.4 3.6 27 43-69 3-29 (189)
116 d1szpa2 c.37.1.11 (A:145-395) 91.9 0.087 6.4E-06 42.7 5.2 54 33-86 22-86 (251)
117 d1zina1 c.37.1.1 (A:1-125,A:16 91.9 0.063 4.6E-06 41.4 4.0 25 45-69 2-26 (182)
118 d2iyva1 c.37.1.2 (A:2-166) Shi 91.9 0.072 5.2E-06 40.5 4.3 28 45-72 3-30 (165)
119 d1em8a_ c.128.1.1 (A:) DNA pol 91.9 0.67 4.9E-05 34.0 9.7 107 266-410 34-145 (147)
120 d1s3ga1 c.37.1.1 (A:1-125,A:16 91.7 0.07 5.1E-06 41.3 4.0 26 45-70 2-27 (182)
121 d1qf9a_ c.37.1.1 (A:) UMP/CMP 91.4 0.069 5.1E-06 41.7 3.8 26 43-68 6-31 (194)
122 d2cdna1 c.37.1.1 (A:1-181) Ade 91.4 0.078 5.7E-06 40.9 4.0 26 45-70 2-27 (181)
123 d1akya1 c.37.1.1 (A:3-130,A:16 91.2 0.09 6.5E-06 40.6 4.2 25 44-68 3-27 (180)
124 d2ak3a1 c.37.1.1 (A:0-124,A:16 91.2 0.084 6.1E-06 41.2 4.0 25 44-68 7-31 (189)
125 d1e4va1 c.37.1.1 (A:1-121,A:15 91.1 0.082 6E-06 40.7 3.9 24 45-68 2-25 (179)
126 d1n0wa_ c.37.1.11 (A:) DNA rep 91.1 0.11 7.7E-06 41.3 4.8 35 33-67 11-47 (242)
127 d1cr2a_ c.37.1.11 (A:) Gene 4 90.8 0.26 1.9E-05 40.7 7.2 44 44-88 36-83 (277)
128 d1byia_ c.37.1.10 (A:) Dethiob 90.8 0.11 8E-06 41.3 4.6 31 44-74 2-36 (224)
129 d1v5wa_ c.37.1.11 (A:) Meiotic 90.7 0.28 2.1E-05 39.7 7.2 59 33-91 25-94 (258)
130 d1ak2a1 c.37.1.1 (A:14-146,A:1 90.6 0.091 6.6E-06 40.9 3.8 24 45-68 5-28 (190)
131 d1teva_ c.37.1.1 (A:) UMP/CMP 90.6 0.096 7E-06 40.9 3.9 24 45-68 3-26 (194)
132 d1gkya_ c.37.1.1 (A:) Guanylat 90.2 0.12 8.6E-06 40.1 4.1 27 44-70 2-28 (186)
133 d1ukza_ c.37.1.1 (A:) Uridylat 89.9 0.12 8.7E-06 40.4 3.9 24 45-68 10-33 (196)
134 d1tf7a1 c.37.1.11 (A:14-255) C 89.8 0.23 1.7E-05 39.7 5.9 56 34-90 15-76 (242)
135 d1e9ra_ c.37.1.11 (A:) Bacteri 89.8 0.17 1.2E-05 45.1 5.3 37 44-80 51-90 (433)
136 d1tuea_ c.37.1.20 (A:) Replica 89.4 0.17 1.2E-05 39.4 4.2 35 33-67 42-77 (205)
137 d1lvga_ c.37.1.1 (A:) Guanylat 89.1 0.15 1.1E-05 39.7 3.9 28 45-72 2-29 (190)
138 d1m8pa3 c.37.1.15 (A:391-573) 89.0 0.12 8.6E-06 39.4 3.2 23 46-68 9-31 (183)
139 d3adka_ c.37.1.1 (A:) Adenylat 88.7 0.18 1.3E-05 39.3 4.1 31 44-76 9-39 (194)
140 d1rz3a_ c.37.1.6 (A:) Hypothet 88.2 0.28 2E-05 37.9 5.0 21 48-68 27-47 (198)
141 d1yj5a2 c.37.1.1 (A:351-522) 5 87.0 0.24 1.8E-05 37.7 3.8 26 43-68 14-39 (172)
142 d1ye8a1 c.37.1.11 (A:1-178) Hy 86.6 0.2 1.5E-05 38.1 3.2 24 45-68 2-25 (178)
143 d2i1qa2 c.37.1.11 (A:65-322) D 86.2 0.33 2.4E-05 39.0 4.5 34 34-67 23-58 (258)
144 d1nlfa_ c.37.1.11 (A:) Hexamer 85.6 0.8 5.8E-05 37.4 6.7 47 44-91 30-89 (274)
145 d1np6a_ c.37.1.10 (A:) Molybdo 85.3 0.45 3.3E-05 35.5 4.6 33 45-77 4-39 (170)
146 d1khta_ c.37.1.1 (A:) Adenylat 85.3 0.28 2E-05 37.4 3.4 31 45-75 3-36 (190)
147 d2fnaa2 c.37.1.20 (A:1-283) Ar 85.2 0.43 3.1E-05 39.0 4.8 48 24-75 14-61 (283)
148 d1q3ta_ c.37.1.1 (A:) CMP kina 84.9 0.33 2.4E-05 38.4 3.8 23 46-68 6-28 (223)
149 d1g8pa_ c.37.1.20 (A:) ATPase 84.8 0.17 1.2E-05 43.3 2.0 24 44-67 29-52 (333)
150 d1ckea_ c.37.1.1 (A:) CMP kina 84.8 0.33 2.4E-05 38.3 3.8 40 46-88 6-45 (225)
151 d1x6va3 c.37.1.4 (A:34-228) Ad 84.5 0.15 1.1E-05 39.5 1.4 23 46-68 22-44 (195)
152 d1nksa_ c.37.1.1 (A:) Adenylat 82.4 0.37 2.7E-05 36.8 3.0 31 46-76 4-37 (194)
153 d1htwa_ c.37.1.18 (A:) Hypothe 82.3 0.33 2.4E-05 36.2 2.5 38 45-82 35-72 (158)
154 d1uj2a_ c.37.1.6 (A:) Uridine- 81.4 0.5 3.6E-05 37.1 3.5 22 47-68 6-27 (213)
155 d1kgda_ c.37.1.1 (A:) Guanylat 81.0 0.57 4.1E-05 35.7 3.6 25 44-68 4-28 (178)
156 d1odfa_ c.37.1.6 (A:) Hypothet 81.0 1.8 0.00013 35.7 6.8 22 44-65 26-49 (286)
157 d1bifa1 c.37.1.7 (A:37-249) 6- 80.8 0.48 3.5E-05 36.9 3.2 30 46-75 5-37 (213)
158 d1ry6a_ c.37.1.9 (A:) Kinesin 80.3 0.52 3.8E-05 40.1 3.4 40 24-63 58-105 (330)
159 d1bg2a_ c.37.1.9 (A:) Kinesin 80.3 0.76 5.5E-05 38.8 4.5 39 25-63 51-96 (323)
160 d1m7ga_ c.37.1.4 (A:) Adenosin 79.0 1.8 0.00013 33.6 6.1 31 45-75 26-60 (208)
161 d1v8ka_ c.37.1.9 (A:) Kinesin 78.6 0.64 4.7E-05 40.0 3.5 39 24-63 88-134 (362)
162 d1goja_ c.37.1.9 (A:) Kinesin 76.9 1.1 7.9E-05 38.4 4.5 39 25-63 55-100 (354)
163 d1ihua1 c.37.1.10 (A:1-296) Ar 76.8 1.6 0.00011 35.9 5.4 33 43-75 8-43 (296)
164 d1xpua3 c.37.1.11 (A:129-417) 76.6 0.94 6.9E-05 37.3 3.7 39 28-66 28-66 (289)
165 d1znwa1 c.37.1.1 (A:20-201) Gu 76.5 0.86 6.3E-05 34.7 3.4 24 45-68 4-27 (182)
166 d1knxa2 c.91.1.2 (A:133-309) H 76.2 0.83 6.1E-05 34.6 3.0 23 44-66 16-38 (177)
167 d2zfia1 c.37.1.9 (A:4-352) Kin 75.8 1 7.4E-05 38.5 3.9 33 29-62 66-106 (349)
168 d2vp4a1 c.37.1.1 (A:12-208) De 75.8 0.6 4.3E-05 36.0 2.2 32 45-76 11-42 (197)
169 d1xjca_ c.37.1.10 (A:) Molybdo 75.4 1.3 9.4E-05 32.9 4.1 30 46-75 4-36 (165)
170 d1x88a1 c.37.1.9 (A:18-362) Ki 75.3 1 7.4E-05 38.4 3.8 38 25-62 56-100 (345)
171 d1kkma_ c.91.1.2 (A:) HPr kina 74.8 1.1 8E-05 33.9 3.4 23 44-66 15-37 (176)
172 d1f9va_ c.37.1.9 (A:) Kinesin 74.8 1.3 9.5E-05 37.6 4.4 38 25-62 59-102 (342)
173 d1sdma_ c.37.1.9 (A:) Kinesin 73.3 1.2 9E-05 38.2 3.8 38 25-63 51-95 (364)
174 d1ko7a2 c.91.1.2 (A:130-298) H 72.8 1.3 9.3E-05 33.3 3.3 23 44-66 16-38 (169)
175 d1ihua2 c.37.1.10 (A:308-586) 72.2 3.1 0.00023 33.7 6.1 33 43-75 20-55 (279)
176 d2ncda_ c.37.1.9 (A:) Kinesin 71.4 1.5 0.00011 37.6 4.0 37 25-62 101-144 (368)
177 d2ocpa1 c.37.1.1 (A:37-277) De 70.7 1.7 0.00013 34.5 4.0 31 43-73 2-32 (241)
178 d1s96a_ c.37.1.1 (A:) Guanylat 70.7 1.9 0.00014 33.5 4.1 24 45-68 4-27 (205)
179 d2b2na1 c.37.1.19 (A:26-333) T 69.0 6.6 0.00048 32.4 7.4 70 56-128 2-92 (308)
180 d1lkxa_ c.37.1.9 (A:) Myosin S 68.9 2 0.00015 40.2 4.5 35 32-66 75-109 (684)
181 d1d0xa2 c.37.1.9 (A:2-33,A:80- 68.9 2 0.00015 40.4 4.5 34 31-64 113-146 (712)
182 d1br2a2 c.37.1.9 (A:80-789) My 68.5 2 0.00015 40.4 4.5 36 30-65 78-113 (710)
183 d1w7ja2 c.37.1.9 (A:63-792) My 68.3 2.1 0.00015 40.6 4.5 36 30-65 81-116 (730)
184 d1u0ja_ c.37.1.20 (A:) Rep 40 68.3 6.1 0.00044 31.9 6.9 42 25-67 85-128 (267)
185 d1sq5a_ c.37.1.6 (A:) Pantothe 67.8 2.7 0.00019 34.9 4.6 21 47-67 84-104 (308)
186 d2eyqa2 c.37.1.19 (A:349-465) 66.7 3.3 0.00024 28.7 4.3 74 257-339 24-97 (117)
187 d2mysa2 c.37.1.9 (A:4-33,A:80- 66.7 2.2 0.00016 40.7 4.3 34 31-64 111-144 (794)
188 d2jdid3 c.37.1.11 (D:82-357) C 66.2 3.8 0.00028 33.3 5.1 36 31-66 56-91 (276)
189 d1vhta_ c.37.1.1 (A:) Dephosph 64.2 2.6 0.00019 32.6 3.7 22 47-69 7-28 (208)
190 d1c9ka_ c.37.1.11 (A:) Adenosy 64.0 3.8 0.00027 30.9 4.4 46 46-92 2-47 (180)
191 d1uf9a_ c.37.1.1 (A:) Dephosph 64.0 1.3 9.8E-05 33.7 1.8 23 47-70 7-29 (191)
192 d1kk8a2 c.37.1.9 (A:1-28,A:77- 63.8 2.4 0.00017 40.5 3.9 34 31-64 109-142 (789)
193 d1yrba1 c.37.1.10 (A:1-244) AT 62.5 3.7 0.00027 32.3 4.4 29 46-74 3-33 (244)
194 d1g3qa_ c.37.1.10 (A:) Cell di 62.2 3.5 0.00025 32.3 4.2 26 49-74 9-37 (237)
195 d1tmka_ c.37.1.1 (A:) Thymidyl 61.9 4.5 0.00032 31.4 4.7 29 46-74 6-34 (214)
196 d2b3ta1 c.66.1.30 (A:2-275) N5 61.2 37 0.0027 27.1 12.3 99 23-126 87-188 (274)
197 d1p5zb_ c.37.1.1 (B:) Deoxycyt 60.2 1.7 0.00013 34.3 2.0 33 44-76 3-35 (241)
198 d1hyqa_ c.37.1.10 (A:) Cell di 57.9 5.3 0.00039 31.0 4.6 28 47-74 6-36 (232)
199 d1jjva_ c.37.1.1 (A:) Dephosph 57.1 3.9 0.00029 31.4 3.6 23 47-70 6-28 (205)
200 d2a9pa1 c.23.1.1 (A:2-118) DNA 56.6 25 0.0018 23.7 9.0 80 69-182 1-82 (117)
201 d1c4oa2 c.37.1.19 (A:410-583) 56.2 11 0.00077 28.1 5.7 52 67-122 30-90 (174)
202 d2pmka1 c.37.1.12 (A:467-707) 55.8 3.8 0.00028 32.6 3.3 21 44-64 30-50 (241)
203 g1xew.1 c.37.1.12 (X:,Y:) Smc 55.0 3.5 0.00026 34.2 3.2 19 45-63 28-46 (329)
204 d1hv8a1 c.37.1.19 (A:3-210) Pu 55.0 26 0.0019 26.5 8.3 68 266-339 70-152 (208)
205 d2p67a1 c.37.1.10 (A:1-327) LA 54.8 11 0.00077 31.4 6.1 33 43-75 54-89 (327)
206 d2a5yb3 c.37.1.20 (B:109-385) 54.7 13 0.00095 29.9 6.7 50 26-75 24-83 (277)
207 d1jj7a_ c.37.1.12 (A:) Peptide 54.1 3.7 0.00027 32.9 2.9 21 44-64 41-61 (251)
208 d1cp2a_ c.37.1.10 (A:) Nitroge 53.3 6.2 0.00045 31.6 4.4 30 46-75 4-36 (269)
209 d1a7ja_ c.37.1.6 (A:) Phosphor 52.3 4 0.00029 33.4 2.9 31 45-75 6-39 (288)
210 d1mv5a_ c.37.1.12 (A:) Multidr 51.7 4.2 0.00031 32.3 2.9 20 44-63 29-48 (242)
211 d2avda1 c.66.1.1 (A:44-262) CO 51.6 47 0.0034 25.3 11.5 66 24-90 41-106 (219)
212 d1w1wa_ c.37.1.12 (A:) Smc hea 51.5 4.6 0.00034 34.7 3.5 19 45-63 27-45 (427)
213 d2hyda1 c.37.1.12 (A:324-578) 51.5 4 0.00029 32.7 2.8 18 44-61 45-62 (255)
214 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 51.1 5.8 0.00042 29.2 3.6 22 42-63 12-33 (186)
215 d2afhe1 c.37.1.10 (E:1-289) Ni 50.9 7.5 0.00055 31.5 4.6 29 46-74 5-36 (289)
216 d4tmka_ c.37.1.1 (A:) Thymidyl 50.9 4.6 0.00034 31.0 3.0 23 45-67 4-26 (210)
217 d1nn5a_ c.37.1.1 (A:) Thymidyl 50.6 4.8 0.00035 31.1 3.1 28 47-74 7-37 (209)
218 d3b60a1 c.37.1.12 (A:329-581) 50.3 4.4 0.00032 32.5 2.8 21 44-64 42-62 (253)
219 d1g2912 c.37.1.12 (1:1-240) Ma 50.3 5 0.00037 31.8 3.1 20 44-63 30-49 (240)
220 d2qtvb1 c.37.1.8 (B:24-189) SA 50.0 5.4 0.0004 28.6 3.2 21 45-65 2-22 (166)
221 d1jr6a_ c.37.1.14 (A:) HCV hel 49.7 17 0.0013 25.6 5.9 51 67-121 34-86 (138)
222 d2fh5b1 c.37.1.8 (B:63-269) Si 49.6 5.4 0.00039 30.5 3.2 20 45-64 2-21 (207)
223 d1l2ta_ c.37.1.12 (A:) MJ0796 49.6 4.9 0.00036 31.6 2.9 21 44-65 32-52 (230)
224 d1r0wa_ c.37.1.12 (A:) Cystic 48.8 5 0.00036 32.7 3.0 20 143-162 174-193 (281)
225 d1g5ta_ c.37.1.11 (A:) ATP:cor 48.0 12 0.00088 27.2 4.7 34 45-78 4-40 (157)
226 d1r8sa_ c.37.1.8 (A:) ADP-ribo 47.9 6 0.00043 28.3 3.1 20 45-64 2-21 (160)
227 d2awna2 c.37.1.12 (A:4-235) Ma 47.5 5.9 0.00043 31.2 3.1 20 44-63 27-46 (232)
228 d2onka1 c.37.1.12 (A:1-240) Mo 47.5 5.9 0.00043 31.3 3.1 20 45-64 26-45 (240)
229 d1nija1 c.37.1.10 (A:2-223) Hy 47.4 7.4 0.00054 30.3 3.8 32 45-76 5-37 (222)
230 d1gsia_ c.37.1.1 (A:) Thymidyl 47.2 6.1 0.00044 30.1 3.2 29 46-74 3-34 (208)
231 d1e2ka_ c.37.1.1 (A:) Thymidin 46.8 5.5 0.0004 33.2 3.0 33 45-77 6-38 (329)
232 d1sgwa_ c.37.1.12 (A:) Putativ 46.5 4.8 0.00035 30.9 2.4 21 44-64 28-48 (200)
233 d1mvoa_ c.23.1.1 (A:) PhoP rec 46.5 38 0.0027 22.8 10.6 83 68-184 2-87 (121)
234 d1susa1 c.66.1.1 (A:21-247) Ca 46.2 58 0.0043 24.9 10.2 124 25-179 42-170 (227)
235 d2qm8a1 c.37.1.10 (A:5-327) Me 45.9 9.2 0.00067 31.8 4.3 31 45-75 53-86 (323)
236 d1hv8a2 c.37.1.19 (A:211-365) 45.6 35 0.0025 24.2 7.2 63 55-121 15-86 (155)
237 d1deka_ c.37.1.1 (A:) Deoxynuc 45.6 7.2 0.00053 30.5 3.5 23 46-68 4-26 (241)
238 d1ksha_ c.37.1.8 (A:) ADP-ribo 45.5 6.4 0.00046 28.6 2.9 18 45-62 4-21 (165)
239 d3dhwc1 c.37.1.12 (C:1-240) Me 45.4 5.9 0.00043 31.4 2.8 20 44-63 32-51 (240)
240 d2cl5a1 c.66.1.1 (A:3-216) Cat 45.0 58 0.0042 24.6 8.9 80 24-106 38-117 (214)
241 d2jdia3 c.37.1.11 (A:95-379) C 44.7 9.9 0.00072 30.9 4.2 36 30-65 55-90 (285)
242 d1moza_ c.37.1.8 (A:) ADP-ribo 44.2 5.1 0.00037 29.8 2.2 21 41-61 15-35 (182)
243 d1nrjb_ c.37.1.8 (B:) Signal r 43.8 8.3 0.0006 29.2 3.5 21 44-64 4-24 (209)
244 d1qhla_ c.37.1.12 (A:) Cell di 43.7 1.8 0.00013 33.0 -0.7 19 45-63 26-44 (222)
245 d2a5ja1 c.37.1.8 (A:9-181) Rab 43.3 7.6 0.00056 28.5 3.1 20 45-64 5-24 (173)
246 d1z2aa1 c.37.1.8 (A:8-171) Rab 42.2 8.2 0.0006 28.0 3.1 20 45-64 4-23 (164)
247 d2f7sa1 c.37.1.8 (A:5-190) Rab 42.2 8 0.00058 28.8 3.1 20 45-64 7-26 (186)
248 d3raba_ c.37.1.8 (A:) Rab3a {R 41.6 8.5 0.00062 28.1 3.1 21 45-65 7-27 (169)
249 d2bmea1 c.37.1.8 (A:6-179) Rab 41.6 8 0.00059 28.4 3.0 20 45-64 7-26 (174)
250 d1u0la2 c.37.1.8 (A:69-293) Pr 41.5 11 0.00081 29.3 3.8 29 29-60 84-112 (225)
251 d1gkub1 c.37.1.16 (B:1-250) He 41.4 53 0.0038 25.0 8.3 70 267-339 85-169 (237)
252 d1xhfa1 c.23.1.1 (A:2-122) Aer 41.4 46 0.0033 22.3 8.8 46 136-182 37-84 (121)
253 d1v43a3 c.37.1.12 (A:7-245) Hy 40.7 8.7 0.00063 30.3 3.1 20 45-64 34-53 (239)
254 d3d31a2 c.37.1.12 (A:1-229) Su 40.3 6 0.00044 31.1 2.0 20 45-64 28-47 (229)
255 d1kaoa_ c.37.1.8 (A:) Rap2a {H 40.1 9.2 0.00067 27.8 3.1 21 45-65 5-25 (167)
256 d2atva1 c.37.1.8 (A:5-172) Ras 40.0 9.2 0.00067 27.9 3.1 21 45-65 4-24 (168)
257 d2b8ea1 c.108.1.7 (A:416-434,A 39.9 54 0.0039 22.7 9.2 46 267-312 36-82 (135)
258 g1f2t.1 c.37.1.12 (A:,B:) Rad5 39.8 8.5 0.00062 30.8 3.1 16 45-60 25-40 (292)
259 d1t5ia_ c.37.1.19 (A:) Spliceo 39.5 56 0.0041 23.5 7.6 65 54-122 12-86 (168)
260 d1yksa2 c.37.1.14 (A:325-623) 39.5 23 0.0017 28.7 5.8 56 63-122 31-91 (299)
261 d1z08a1 c.37.1.8 (A:17-183) Ra 39.1 9.7 0.0007 27.7 3.1 20 45-64 5-24 (167)
262 d1ji0a_ c.37.1.12 (A:) Branche 39.0 8.9 0.00065 30.3 2.9 20 45-64 34-53 (240)
263 d1p6xa_ c.37.1.1 (A:) Thymidin 38.7 13 0.00095 30.9 4.1 24 45-68 8-31 (333)
264 d2erxa1 c.37.1.8 (A:6-176) di- 38.5 10 0.00073 27.7 3.1 20 45-64 4-23 (171)
265 d1ky3a_ c.37.1.8 (A:) Rab-rela 38.4 10 0.00073 27.8 3.1 21 45-65 4-24 (175)
266 d1fx0a3 c.37.1.11 (A:97-372) C 38.4 9.9 0.00072 30.7 3.2 23 44-66 68-90 (276)
267 d1zj6a1 c.37.1.8 (A:2-178) ADP 38.1 9.8 0.00071 27.8 3.0 21 43-63 15-35 (177)
268 d1z06a1 c.37.1.8 (A:32-196) Ra 38.0 10 0.00076 27.3 3.1 21 45-65 4-24 (165)
269 d1kmqa_ c.37.1.8 (A:) RhoA {Hu 37.1 10 0.00073 27.9 2.9 20 45-64 4-23 (177)
270 d2f9la1 c.37.1.8 (A:8-182) Rab 37.0 11 0.0008 27.6 3.1 20 45-64 6-25 (175)
271 d1b0ua_ c.37.1.12 (A:) ATP-bin 36.8 9.9 0.00072 30.4 2.9 20 44-63 29-48 (258)
272 d1zd9a1 c.37.1.8 (A:18-181) AD 36.8 11 0.00082 27.2 3.1 20 45-64 4-23 (164)
273 d1ny5a1 c.23.1.1 (A:1-137) Tra 36.8 60 0.0043 22.3 8.6 44 136-181 35-82 (137)
274 d1u0sy_ c.23.1.1 (Y:) CheY pro 36.6 55 0.004 21.8 9.3 46 136-182 37-85 (118)
275 d1upta_ c.37.1.8 (A:) ADP-ribo 36.5 11 0.00083 26.9 3.1 19 45-63 7-25 (169)
276 d1z0fa1 c.37.1.8 (A:8-173) Rab 36.5 11 0.00083 27.2 3.1 20 45-64 6-25 (166)
277 d1t5la2 c.37.1.19 (A:415-595) 36.1 27 0.002 25.9 5.3 73 67-157 30-111 (181)
278 d1r2qa_ c.37.1.8 (A:) Rab5a {H 36.1 12 0.00085 27.3 3.1 20 45-64 8-27 (170)
279 d1x1ra1 c.37.1.8 (A:10-178) Ra 35.3 12 0.00088 27.2 3.1 20 45-64 6-25 (169)
280 d1krwa_ c.23.1.1 (A:) NTRC rec 35.1 59 0.0043 21.8 9.0 46 136-183 38-87 (123)
281 g1ii8.1 c.37.1.12 (A:,B:) Rad5 35.0 11 0.00079 30.9 3.1 16 45-60 25-40 (369)
282 d2erya1 c.37.1.8 (A:10-180) r- 34.9 12 0.00086 27.3 3.0 21 45-65 7-27 (171)
283 d2fn4a1 c.37.1.8 (A:24-196) r- 34.8 12 0.00086 27.4 3.0 20 45-64 8-27 (173)
284 d1m7ba_ c.37.1.8 (A:) RhoE (RN 34.5 12 0.00088 27.6 3.0 21 45-65 4-24 (179)
285 d2g6ba1 c.37.1.8 (A:58-227) Ra 34.0 13 0.00096 27.0 3.1 20 45-64 8-27 (170)
286 d2bv3a2 c.37.1.8 (A:7-282) Elo 33.9 12 0.0009 30.1 3.1 25 44-68 7-31 (276)
287 d1oxxk2 c.37.1.12 (K:1-242) Gl 33.7 6.8 0.00049 31.0 1.3 21 44-64 32-52 (242)
288 d1ctqa_ c.37.1.8 (A:) cH-p21 R 33.3 13 0.00096 26.8 3.0 20 45-64 5-24 (166)
289 d1yzqa1 c.37.1.8 (A:14-177) Ra 33.2 13 0.00097 26.7 3.0 20 45-64 2-21 (164)
290 d2gjsa1 c.37.1.8 (A:91-258) Ra 33.1 14 0.001 26.8 3.1 18 45-62 3-20 (168)
291 d1s2ma2 c.37.1.19 (A:252-422) 33.0 79 0.0058 22.6 7.7 65 54-122 17-91 (171)
292 d1mh1a_ c.37.1.8 (A:) Rac {Hum 32.9 14 0.001 27.3 3.1 21 45-65 7-27 (183)
293 d1xtqa1 c.37.1.8 (A:3-169) GTP 32.9 13 0.00098 26.8 3.0 22 44-65 5-26 (167)
294 d1z0ja1 c.37.1.8 (A:2-168) Rab 32.8 14 0.001 26.7 3.1 20 45-64 6-25 (167)
295 d2ngra_ c.37.1.8 (A:) CDC42 {H 32.5 13 0.00098 27.6 3.0 21 45-65 5-25 (191)
296 d2cxxa1 c.37.1.8 (A:2-185) GTP 32.2 14 0.001 27.1 3.0 20 45-64 2-21 (184)
297 d1l7vc_ c.37.1.12 (C:) ABC tra 32.2 10 0.00073 29.7 2.2 19 45-63 27-45 (231)
298 d1peya_ c.23.1.1 (A:) Sporulat 32.1 66 0.0048 21.4 8.9 45 137-182 37-84 (119)
299 d1c1ya_ c.37.1.8 (A:) Rap1A {H 31.9 15 0.0011 26.5 3.1 20 45-64 5-24 (167)
300 d1mkya1 c.37.1.8 (A:2-172) Pro 31.8 15 0.0011 26.6 3.1 19 45-63 2-20 (171)
301 d1ek0a_ c.37.1.8 (A:) Ypt51 {B 31.7 15 0.0011 26.6 3.1 20 45-64 5-24 (170)
302 d1wzna1 c.66.1.43 (A:1-251) Hy 31.4 1E+02 0.0073 23.3 10.3 75 45-126 43-118 (251)
303 d1vpla_ c.37.1.12 (A:) Putativ 31.4 9.9 0.00072 29.9 2.0 19 45-63 30-48 (238)
304 d2ew1a1 c.37.1.8 (A:4-174) Rab 31.3 15 0.0011 26.7 3.0 20 45-64 7-26 (171)
305 d1i2ma_ c.37.1.8 (A:) Ran {Hum 31.3 11 0.00082 27.4 2.3 17 45-61 5-21 (170)
306 d1wmsa_ c.37.1.8 (A:) Rab9a {H 31.1 16 0.0011 26.7 3.1 21 45-65 8-28 (174)
307 d2gj8a1 c.37.1.8 (A:216-376) P 30.9 15 0.0011 26.1 3.0 17 45-61 3-19 (161)
308 d1g16a_ c.37.1.8 (A:) Rab-rela 30.7 15 0.0011 26.4 3.0 21 45-65 4-24 (166)
309 d1vg8a_ c.37.1.8 (A:) Rab7 {Ra 30.6 16 0.0012 26.9 3.1 20 45-64 4-23 (184)
310 d1u8za_ c.37.1.8 (A:) Ras-rela 30.6 16 0.0012 26.4 3.1 20 45-64 6-25 (168)
311 d1fzqa_ c.37.1.8 (A:) ADP-ribo 30.5 14 0.0011 26.8 2.8 18 44-61 17-34 (176)
312 d2atxa1 c.37.1.8 (A:9-193) Rho 30.0 16 0.0011 27.0 3.0 20 45-64 11-30 (185)
313 d1svia_ c.37.1.8 (A:) Probable 29.3 16 0.0012 27.1 3.0 20 45-64 25-44 (195)
314 d1g6ha_ c.37.1.12 (A:) MJ1267 29.3 16 0.0011 29.0 2.9 20 45-64 32-51 (254)
315 d1mb3a_ c.23.1.1 (A:) Cell div 29.3 75 0.0054 21.1 9.1 47 137-185 37-89 (123)
316 d1h65a_ c.37.1.8 (A:) Chloropl 29.2 12 0.0009 29.6 2.3 21 44-64 33-53 (257)
317 d2j0sa1 c.37.1.19 (A:22-243) P 29.2 70 0.0051 24.2 6.9 67 268-339 85-166 (222)
318 d1e69a_ c.37.1.12 (A:) Smc hea 28.9 14 0.001 29.8 2.7 16 45-60 26-41 (308)
319 d2bcgy1 c.37.1.8 (Y:3-196) GTP 28.8 17 0.0012 27.1 3.0 20 45-64 8-27 (194)
320 d2g3ya1 c.37.1.8 (A:73-244) GT 28.5 18 0.0013 26.2 3.1 18 45-62 5-22 (172)
321 d1ppya_ b.52.2.1 (A:) Pyruvoyl 28.5 48 0.0035 22.4 4.8 34 112-157 81-114 (118)
322 d1wf3a1 c.37.1.8 (A:3-180) GTP 27.6 19 0.0014 26.2 3.1 20 45-64 7-26 (178)
323 d2bwna1 c.67.1.4 (A:2-397) 5-a 27.6 1.6E+02 0.012 24.5 9.7 70 113-186 176-250 (396)
324 d1azta2 c.37.1.8 (A:35-65,A:20 27.5 15 0.0011 28.3 2.4 18 44-61 7-24 (221)
325 d2fu5c1 c.37.1.8 (C:3-175) Rab 26.9 11 0.0008 27.6 1.5 19 45-63 8-26 (173)
326 d2bcjq2 c.37.1.8 (Q:38-66,Q:18 26.8 19 0.0014 26.6 3.0 20 45-64 4-23 (200)
327 d1lnza2 c.37.1.8 (A:158-342) O 26.5 17 0.0012 26.7 2.6 17 45-61 3-19 (185)
328 d2dy1a2 c.37.1.8 (A:8-274) Elo 26.5 21 0.0015 28.5 3.3 24 44-67 3-26 (267)
329 d1zcba2 c.37.1.8 (A:47-75,A:20 26.3 19 0.0014 26.6 2.9 18 45-62 4-21 (200)
330 d2bmja1 c.37.1.8 (A:66-240) Ce 26.2 21 0.0015 26.1 3.0 21 45-65 7-27 (175)
331 d1oywa3 c.37.1.19 (A:207-406) 25.6 67 0.0049 23.9 6.0 52 67-122 29-89 (200)
332 d1zesa1 c.23.1.1 (A:3-123) Pho 25.5 88 0.0064 20.7 8.7 47 136-182 35-85 (121)
333 d1e0sa_ c.37.1.8 (A:) ADP-ribo 25.2 15 0.0011 26.7 2.0 28 34-62 4-31 (173)
334 d1mkya2 c.37.1.8 (A:173-358) P 25.1 23 0.0017 25.9 3.1 19 45-63 10-28 (186)
335 d1puia_ c.37.1.8 (A:) Probable 24.4 17 0.0013 26.4 2.3 16 44-59 17-32 (188)
336 d1x3sa1 c.37.1.8 (A:2-178) Rab 24.3 25 0.0018 25.6 3.1 19 45-63 9-27 (177)
337 d1osna_ c.37.1.1 (A:) Thymidin 24.1 22 0.0016 29.5 2.9 24 45-68 7-30 (331)
338 d1udxa2 c.37.1.8 (A:157-336) O 23.1 19 0.0014 26.3 2.2 18 45-62 3-20 (180)
339 d1ozbi_ g.74.1.1 (I:) Preprote 21.9 11 0.00083 17.7 0.4 9 50-58 7-15 (26)
340 d1svsa1 c.37.1.8 (A:32-60,A:18 21.7 29 0.0021 25.3 3.1 17 45-61 4-20 (195)
341 d1a1va2 c.37.1.14 (A:326-624) 21.3 1.5E+02 0.011 23.6 7.5 34 68-105 36-69 (299)
342 d1uaaa1 c.37.1.19 (A:2-307) DE 20.9 30 0.0022 27.6 3.2 39 144-182 205-243 (306)
343 d2b2na1 c.37.1.19 (A:26-333) T 20.0 57 0.0042 26.4 4.8 54 267-321 13-84 (308)
No 1
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.95 E-value=5e-27 Score=198.04 Aligned_cols=143 Identities=28% Similarity=0.495 Sum_probs=119.6
Q ss_pred ccCCCCCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCc
Q 015196 19 ELKPHAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQ 98 (411)
Q Consensus 19 ~~~~~~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~ 98 (411)
.....++|||||+++++.++.+. ++++.+|||+|||++++.++.++++++||+||+++|+.||.+++..+.. ..
T Consensus 64 ~~~~~~~Lr~yQ~eav~~~~~~~---~~ll~~~tG~GKT~~a~~~~~~~~~~~Liv~p~~~L~~q~~~~~~~~~~---~~ 137 (206)
T d2fz4a1 64 YFDAEISLRDYQEKALERWLVDK---RGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAEQWKERLGIFGE---EY 137 (206)
T ss_dssp CCCCCCCCCHHHHHHHHHHTTTS---EEEEEESSSTTHHHHHHHHHHHSCSCEEEEESSHHHHHHHHHHHGGGCG---GG
T ss_pred CCCCCCCcCHHHHHHHHHHHhCC---CcEEEeCCCCCceehHHhHHHHhcCceeEEEcccchHHHHHHHHHhhcc---cc
Confidence 34567899999999999998765 8899999999999999999999999999999999999999999998743 35
Q ss_pred EEEEcCchhhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHHHHHhhccccEEEEe
Q 015196 99 ICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLT 178 (411)
Q Consensus 99 v~~~~~~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~~~~~~i~lS 178 (411)
++.+.+.... ...++++|++++.... ..+ ..++++||+||||++.++.+..++..+.+.++++||
T Consensus 138 ~~~~~~~~~~----~~~i~i~t~~~~~~~~----------~~~-~~~~~lvIiDEaH~~~a~~~~~i~~~~~~~~~lgLT 202 (206)
T d2fz4a1 138 VGEFSGRIKE----LKPLTVSTYDSAYVNA----------EKL-GNRFMLLIFDEVHHLPAESYVQIAQMSIAPFRLGLT 202 (206)
T ss_dssp EEEESSSCBC----CCSEEEEEHHHHHHTH----------HHH-TTTCSEEEEECSSCCCTTTHHHHHHTCCCSEEEEEE
T ss_pred hhhccccccc----ccccccceehhhhhhh----------Hhh-CCcCCEEEEECCeeCCcHHHHHHHhccCCCcEEEEe
Confidence 6677665443 3679999998775431 222 357899999999999999999888888888899999
Q ss_pred eecc
Q 015196 179 ATLV 182 (411)
Q Consensus 179 ATp~ 182 (411)
||+.
T Consensus 203 ATl~ 206 (206)
T d2fz4a1 203 ATFE 206 (206)
T ss_dssp ESCC
T ss_pred cCCC
Confidence 9983
No 2
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=99.94 E-value=1.2e-26 Score=209.04 Aligned_cols=248 Identities=19% Similarity=0.149 Sum_probs=154.7
Q ss_pred cceEEEcCCCCCHHHHHHHHH----HhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhhhcCCCcEEEE
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA----CRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKERFRGNAGVVVT 119 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~----~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~I~v~ 119 (411)
+.+++.||||+|||++++..+ ...+.++||++|+++|+.|+.++|..+.. .. ......+ .......++++
T Consensus 10 ~~~lv~~~TGsGKT~~~l~~~~~~~~~~~~~~lvi~Ptr~La~q~~~~l~~~~~-~~-~~~~~~~----~~~~~~~i~~~ 83 (305)
T d2bmfa2 10 RLTIMDLHPGAGKTKRYLPAIVREAIKRGLRTLILAPTRVVAAEMEEALRGLPI-RY-QTPAIRA----EHTGREIVDLM 83 (305)
T ss_dssp CEEEECCCTTSSTTTTHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHTTTSCC-BC-CC------------CCCSEEEE
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHHhcCCEEEEEccHHHHHHHHHHHHhcCCc-ce-eeeEEee----cccCccccccC
Confidence 588999999999997655333 23467999999999999999998877532 11 1111111 12234678999
Q ss_pred ecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhH--HHHHHh---hccccEEEEeeecccCchhhhhhhhh
Q 015196 120 TYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF--RKVISL---TKSHCKLGLTATLVREDERITDLNFL 194 (411)
Q Consensus 120 t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~--~~~~~~---~~~~~~i~lSATp~~~~~~~~~~~~~ 194 (411)
|+..+...... .....+++++|+||+|++....+ ...+.. ....+++++|||+........
T Consensus 84 t~~~l~~~~~~---------~~~~~~~~~vViDE~H~~~~~~~~~~~~l~~~~~~~~~~~v~~SAT~~~~~~~~~----- 149 (305)
T d2bmfa2 84 CHATFTMRLLS---------PIRVPNYNLIIMDEAHFTDPASIAARGYISTRVEMGEAAGIFMTATPPGSRDPFP----- 149 (305)
T ss_dssp EHHHHHHHHTS---------SSCCCCCSEEEEESTTCCSHHHHHHHHHHHHHHHHTSCEEEEECSSCTTCCCSSC-----
T ss_pred CcHHHHHHHhc---------CccccceeEEEeeeeeecchhhHHHHHHHHHhhccccceEEEeecCCCcceeeec-----
Confidence 98866432111 11124688999999999976532 222221 234578999999964322100
Q ss_pred hcccchhhchHHHHhcCCcccceeEEEEcCCCHHHHHHHHhhhchhhhhhhhhcCCCcHHHHHHHHHHhhhcCCCeEEEE
Q 015196 195 IGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFSEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVF 274 (411)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~l~~~~~~~~~~~~ivf 274 (411)
. ...+.. ........ ..+......+. ..+.+++||
T Consensus 150 -~---------------~~~~~~--~~~~~~~~----------------------~~~~~~~~~~~-----~~~~~~lvf 184 (305)
T d2bmfa2 150 -Q---------------SNAPIM--DEEREIPE----------------------RSWNSGHEWVT-----DFKGKTVWF 184 (305)
T ss_dssp -C---------------CSSCEE--EEECCCCC----------------------SCCSSCCHHHH-----SSCSCEEEE
T ss_pred -c---------------cCCcce--EEEEeccH----------------------HHHHHHHHHHH-----hhCCCEEEE
Confidence 0 000100 11101000 00000011111 346789999
Q ss_pred ecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEe----------
Q 015196 275 ADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQI---------- 339 (411)
Q Consensus 275 ~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~---------- 339 (411)
|++++.++.+++.| ++..+||++.... ...|+++ ..+++|+|+++++|+|++ ++.|+..
T Consensus 185 ~~~~~~~~~l~~~L~~~~~~~~~l~~~~~~~~----~~~~~~~-~~~~lvaT~~~~~G~~~~-~~~Vi~~~~~~~~~~~~ 258 (305)
T d2bmfa2 185 VPSIKAGNDIAACLRKNGKKVIQLSRKTFDSE----YIKTRTN-DWDFVVTTDISEMGANFK-AERVIDPRRCMKPVILT 258 (305)
T ss_dssp CSCHHHHHHHHHHHHHHTCCCEECCTTCHHHH----GGGGGTS-CCSEEEECGGGGTTCCCC-CSEEEECCEEEEEEEEC
T ss_pred eccHHHHHHHHHHHHhCCCCEEEeCCcChHHH----Hhhhhcc-chhhhhhhHHHHhcCCCC-ccEEEEcCCceeeeEec
Confidence 99999999999998 3566888876544 4568887 999999999999999995 5554421
Q ss_pred cC---------CCCCHHHHHHHhhcccccCCC
Q 015196 340 SS---------HAGSRRQEAQRLGRILRAKGK 362 (411)
Q Consensus 340 ~~---------~~~s~~~~~Q~~GR~~R~~~~ 362 (411)
+. .+-|..+|+|++||+||.+++
T Consensus 259 ~~~~~~~~~~~~~~s~~~~~Qr~GR~GR~~~~ 290 (305)
T d2bmfa2 259 DGEERVILAGPMPVTHSSAAQRRGRVGRNPKN 290 (305)
T ss_dssp SSSCEEEEEEEEECCHHHHHHHHTTSSCSSSC
T ss_pred CCCCceEEeccccCCHHHHhhhhcCcCcCCCC
Confidence 11 123788999999999999963
No 3
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.93 E-value=5e-26 Score=200.42 Aligned_cols=162 Identities=22% Similarity=0.309 Sum_probs=127.1
Q ss_pred CCCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH----hcCCceEEEEcChhhHHHHHHHHHHHhCCCCCc
Q 015196 23 HAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC----RIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQ 98 (411)
Q Consensus 23 ~~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~----~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~ 98 (411)
.++||+||++|+..++.++ ++++.+|||+|||++++.++. ....++|++||+++|+.||.++|.++.......
T Consensus 111 ~~~~rdyQ~~av~~~l~~~---~~il~~pTGsGKT~i~~~i~~~~~~~~~~k~Liivp~~~Lv~Q~~~~f~~~~~~~~~~ 187 (282)
T d1rifa_ 111 RIEPHWYQKDAVFEGLVNR---RRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYRLFSHAM 187 (282)
T ss_dssp ECCCCHHHHHHHHHHHHHS---EEEECCCTTSCHHHHHHHHHHHHHHHCSSEEEEECSSHHHHHHHHHHHHHHTSCCGGG
T ss_pred ccccchHHHHHHHHHHhcC---CceeEEEcccCccHHHHHHHHHhhhcccceEEEEEcCchhHHHHHHHHHHhhcccccc
Confidence 4899999999999999876 899999999999999887763 335689999999999999999999987655555
Q ss_pred EEEEcCchhh--hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHHHHHhhc-cccEE
Q 015196 99 ICRFTSDSKE--RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTK-SHCKL 175 (411)
Q Consensus 99 v~~~~~~~~~--~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~~-~~~~i 175 (411)
+....++... .......++++|++++....+. . ...+++||+||||+..++.+.+++..+. +..++
T Consensus 188 ~~~~~~g~~~~~~~~~~~~i~i~t~qs~~~~~~~---------~--~~~f~~VIvDEaH~~~a~~~~~il~~~~~~~~rl 256 (282)
T d1rifa_ 188 IKKIGGGASKDDKYKNDAPVVVGTWQTVVKQPKE---------W--FSQFGMMMNDECHLATGKSISSIISGLNNCMFKF 256 (282)
T ss_dssp EEECSTTCSSTTCCCTTCSEEEECHHHHTTSCGG---------G--GGGEEEEEEETGGGCCHHHHHHHTTTCTTCCEEE
T ss_pred ceeecceecccccccccceEEEEeeehhhhhccc---------c--cCCCCEEEEECCCCCCchhHHHHHHhccCCCeEE
Confidence 6665554322 1234578999999987654311 1 2468999999999999999988887764 45679
Q ss_pred EEeeecccCchhhhhhhhhhccc
Q 015196 176 GLTATLVREDERITDLNFLIGPK 198 (411)
Q Consensus 176 ~lSATp~~~~~~~~~~~~~~~~~ 198 (411)
||||||.+.......+..++||+
T Consensus 257 GlTaT~~~~~~~~~~l~g~~Gpv 279 (282)
T d1rifa_ 257 GLSGSLRDGKANIMQYVGMFGEI 279 (282)
T ss_dssp EECSSCCTTSTTHHHHHHHHCEE
T ss_pred EEEeecCCCCcceEEEeeecCCc
Confidence 99999987666555666777765
No 4
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.89 E-value=2.6e-23 Score=174.93 Aligned_cols=151 Identities=26% Similarity=0.280 Sum_probs=110.0
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH----hcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcE
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC----RIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQI 99 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~----~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v 99 (411)
++||+||+++++.+..+ ++++++|||+|||++++.++. ..++++++++|+++|++||.+++.++++.....+
T Consensus 8 ~~pr~~Q~~~~~~~~~~----n~lv~~pTGsGKT~i~~~~~~~~~~~~~~~il~i~P~~~L~~q~~~~~~~~~~~~~~~v 83 (200)
T d1wp9a1 8 IQPRIYQEVIYAKCKET----NCLIVLPTGLGKTLIAMMIAEYRLTKYGGKVLMLAPTKPLVLQHAESFRRLFNLPPEKI 83 (200)
T ss_dssp HCCCHHHHHHHHHGGGS----CEEEECCTTSCHHHHHHHHHHHHHHHSCSCEEEECSSHHHHHHHHHHHHHHBCSCGGGE
T ss_pred CCCCHHHHHHHHHHhcC----CeEEEeCCCCcHHHHHHHHHHHHHHhcCCcEEEEcCchHHHHHHHHHHHHhhcccccce
Confidence 58999999999987653 789999999999998777653 3467899999999999999999999987776777
Q ss_pred EEEcCchhh----hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHH-----HHHhhc
Q 015196 100 CRFTSDSKE----RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK-----VISLTK 170 (411)
Q Consensus 100 ~~~~~~~~~----~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~-----~~~~~~ 170 (411)
....++... .......++++|++.+...... ..+....+++||+||||++....... ......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~i~t~~~~~~~~~~--------~~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~ 155 (200)
T d1wp9a1 84 VALTGEKSPEERSKAWARAKVIVATPQTIENDLLA--------GRISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK 155 (200)
T ss_dssp EEECSCSCHHHHHHHHHHCSEEEECHHHHHHHHHT--------TSCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCS
T ss_pred eeeecccchhHHHHhhhcccccccccchhHHHHhh--------hhhhccccceEEEEehhhhhcchhHHHHHHHHHhcCC
Confidence 766654332 1123468999999877543211 11223578899999999988653221 222224
Q ss_pred cccEEEEeeecccCch
Q 015196 171 SHCKLGLTATLVREDE 186 (411)
Q Consensus 171 ~~~~i~lSATp~~~~~ 186 (411)
..++++|||||.....
T Consensus 156 ~~~~l~~SATp~~~~~ 171 (200)
T d1wp9a1 156 NPLVIGLTASPGSTPE 171 (200)
T ss_dssp SCCEEEEESCSCSSHH
T ss_pred CCcEEEEEecCCCcHH
Confidence 4478999999975443
No 5
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.89 E-value=2.2e-23 Score=174.88 Aligned_cols=123 Identities=37% Similarity=0.504 Sum_probs=109.8
Q ss_pred CCCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHhCCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCcccc
Q 015196 249 NPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSI 328 (411)
Q Consensus 249 ~~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gi 328 (411)
.+.|+..+..+++.+. +.++||||++.+.++.+.+.|++..+||.++..+|+.+++.|+++ +++|||+|+++++|+
T Consensus 77 ~~~K~~~l~~ll~~~~---~~k~lvf~~~~~~~~~l~~~l~~~~i~g~~~~~~R~~~l~~F~~~-~~~vLv~~~~~~~Gi 152 (200)
T d2fwra1 77 SKNKIRKLREILERHR---KDKIIIFTRHNELVYRISKVFLIPAITHRTSREEREEILEGFRTG-RFRAIVSSQVLDEGI 152 (200)
T ss_dssp CSHHHHHHHHHHHHTS---SSCBCCBCSCHHHHHHHHHHTTCCBCCSSSCSHHHHTHHHHHHHS-SCSBCBCSSCCCSSS
T ss_pred cHHHHHHHHHHHHhCC---CCcEEEEeCcHHHHHHHHhhcCcceeeCCCCHHHHHHHHHHhhcC-Ceeeeeecchhhccc
Confidence 3446666777776554 789999999999999999999999999999999999999999997 999999999999999
Q ss_pred CccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCc
Q 015196 329 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDT 386 (411)
Q Consensus 329 d~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~ 386 (411)
|+|.++++|+++++ +|...++|++||++|.+++|+ .+++|.+++.+|
T Consensus 153 dl~~~~~vi~~~~~-~s~~~~~Q~iGR~~R~~~~k~----------~~~i~~~v~~~T 199 (200)
T d2fwra1 153 DVPDANVGVIMSGS-GSAREYIQRLGRILRPSKGKK----------EAVLYELISRGT 199 (200)
T ss_dssp CSCCBSEEEEECCS-SCCHHHHHHHHHSBCCCTTTC----------CEEEEEEEECSC
T ss_pred CCCCCCEEEEeCCC-CCHHHHHHHHHhcCCCCCCCc----------EEEEEEEecCCC
Confidence 99999999998655 599999999999999997544 789999999887
No 6
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.83 E-value=2.5e-20 Score=151.49 Aligned_cols=118 Identities=19% Similarity=0.236 Sum_probs=101.9
Q ss_pred CCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccC
Q 015196 250 PNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVG 324 (411)
Q Consensus 250 ~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~ 324 (411)
..|...+..+++... +.++||||++.++++.++..| .+..+||+++..+|..+++.|+++ ..++||||+++
T Consensus 17 ~~K~~~L~~ll~~~~---~~k~iVF~~~~~~~~~l~~~L~~~g~~~~~~h~~~~~~~r~~~~~~f~~~-~~~ilv~Td~~ 92 (171)
T d1s2ma2 17 RQKLHCLNTLFSKLQ---INQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQG-KVRTLVCSDLL 92 (171)
T ss_dssp GGHHHHHHHHHHHSC---CSEEEEECSSHHHHHHHHHHHHHHTCCEEEECTTSCHHHHHHHHHHHHTT-SSSEEEESSCS
T ss_pred HHHHHHHHHHHHhCC---CCceEEEEeeeehhhHhHHhhhcccccccccccccchhhhhhhhhhcccC-ccccccchhHh
Confidence 346677777776554 789999999999999999998 356789999999999999999998 99999999999
Q ss_pred ccccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCC
Q 015196 325 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTD 385 (411)
Q Consensus 325 ~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~ 385 (411)
++|+|+|++++||+++.| ++...|+||+||+||.|+ .+..+.++.++
T Consensus 93 ~~Gid~~~v~~VI~~d~p-~~~~~y~qr~GR~gR~g~-------------~g~~i~~v~~~ 139 (171)
T d1s2ma2 93 TRGIDIQAVNVVINFDFP-KTAETYLHRIGRSGRFGH-------------LGLAINLINWN 139 (171)
T ss_dssp SSSCCCTTEEEEEESSCC-SSHHHHHHHHCBSSCTTC-------------CEEEEEEECGG
T ss_pred hhccccceeEEEEecCCc-chHHHHHHHhhhcccCCC-------------ccEEEEEeCHH
Confidence 999999999999998666 599999999999999885 24456777654
No 7
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.83 E-value=3.7e-20 Score=149.66 Aligned_cols=107 Identities=18% Similarity=0.143 Sum_probs=96.0
Q ss_pred CCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccC
Q 015196 250 PNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVG 324 (411)
Q Consensus 250 ~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~ 324 (411)
..|...+..+++... +.++||||++++.++.+.+.| .+..+||+++..+|..+++.|++| +.++||+|+++
T Consensus 12 ~~K~~~L~~ll~~~~---~~k~iIF~~~~~~~~~l~~~L~~~~~~~~~ihg~~~~~~r~~~l~~F~~g-~~~iLv~T~~~ 87 (168)
T d1t5ia_ 12 NEKNRKLFDLLDVLE---FNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF-QRRILVATNLF 87 (168)
T ss_dssp GGHHHHHHHHHHHSC---CSSEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT-SCSEEEESSCC
T ss_pred HHHHHHHHHHHHhCC---CCeEEEEEeeeecchhhhhhhccccccccccccccchhhhhhhhhhhccc-cceeeeccccc
Confidence 456677777776664 779999999999999999988 356899999999999999999998 99999999999
Q ss_pred ccccCccCccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 325 DNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 325 ~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
++|+|+|.+++||+++.| .|...|+|++||+||.|+
T Consensus 88 ~~Gid~~~~~~vi~~~~p-~~~~~yiqr~GR~gR~g~ 123 (168)
T d1t5ia_ 88 GRGMDIERVNIAFNYDMP-EDSDTYLHRVARAGRFGT 123 (168)
T ss_dssp STTCCGGGCSEEEESSCC-SSHHHHHHHHHHHTGGGC
T ss_pred cchhhcccchhhhhhhcc-cchhhHhhhhhhcccCCC
Confidence 999999999999998655 699999999999999885
No 8
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.82 E-value=6e-21 Score=160.31 Aligned_cols=147 Identities=22% Similarity=0.282 Sum_probs=104.8
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEE
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR---IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICR 101 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~ 101 (411)
.|+|||++++..+..+. ++++.+|||+|||+++...+.. ..+++++++|+++|+.|+.++++++.+.. ..++.
T Consensus 25 ~l~~~Q~~ai~~l~~~~---~~il~apTGsGKT~~a~l~i~~~~~~~~~vl~l~P~~~L~~q~~~~~~~~~~~~-~~v~~ 100 (202)
T d2p6ra3 25 ELFPPQAEAVEKVFSGK---NLLLAMPTAAGKTLLAEMAMVREAIKGGKSLYVVPLRALAGEKYESFKKWEKIG-LRIGI 100 (202)
T ss_dssp CCCCCCHHHHHHHTTCS---CEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHHTTTTTTT-CCEEE
T ss_pred CCCHHHHHHHHHHHcCC---CEEEEcCCCCchhHHHHHHHHHHhhccCcceeecccHHHHHHHHHHHHHHhhcc-cccee
Confidence 69999999999998765 8999999999999998665432 35789999999999999999999876433 44555
Q ss_pred EcCchh--hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchh----HHHHHHhh----cc
Q 015196 102 FTSDSK--ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM----FRKVISLT----KS 171 (411)
Q Consensus 102 ~~~~~~--~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~----~~~~~~~~----~~ 171 (411)
..+... ........|+++|+..+........ .....+++||+||+|++.+.. +..++..+ +.
T Consensus 101 ~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~--------~~~~~~~~ii~DE~h~~~~~~r~~~~~~~l~~i~~~~~~ 172 (202)
T d2p6ra3 101 STGDYESRDEHLGDCDIIVTTSEKADSLIRNRA--------SWIKAVSCLVVDEIHLLDSEKRGATLEILVTKMRRMNKA 172 (202)
T ss_dssp ECSSCBCCSSCSTTCSEEEEEHHHHHHHHHTTC--------SGGGGCCEEEETTGGGGGCTTTHHHHHHHHHHHHHHCTT
T ss_pred eccCcccccccccccceeeeccHHHHHHHhccc--------hhhhhhhhccccHHHHhcccccchHHHHHHHHHHhcCCC
Confidence 544322 2223457899999987754321110 012467899999999987652 22222222 34
Q ss_pred ccEEEEeeeccc
Q 015196 172 HCKLGLTATLVR 183 (411)
Q Consensus 172 ~~~i~lSATp~~ 183 (411)
.++++||||..+
T Consensus 173 ~~~l~lSATl~n 184 (202)
T d2p6ra3 173 LRVIGLSATAPN 184 (202)
T ss_dssp CEEEEEECCCTT
T ss_pred CcEEEEcCCCCc
Confidence 479999999643
No 9
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.82 E-value=2.7e-20 Score=149.42 Aligned_cols=106 Identities=18% Similarity=0.281 Sum_probs=92.4
Q ss_pred CcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCc
Q 015196 251 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGD 325 (411)
Q Consensus 251 ~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~ 325 (411)
.|...+..+++... ..++||||++...++.+++.| .+..+||+++..+|..+++.|+.+ +.++||||++++
T Consensus 13 ~K~~~L~~ll~~~~---~~k~iIF~~s~~~~~~l~~~L~~~~~~~~~~~~~~~~~~r~~~l~~f~~~-~~~iLv~Tdv~~ 88 (162)
T d1fuka_ 13 YKYECLTDLYDSIS---VTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSG-SSRILISTDLLA 88 (162)
T ss_dssp GHHHHHHHHHHHTT---CSCEEEEESSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT-SCSEEEEEGGGT
T ss_pred HHHHHHHHHHHhCC---CCcEEEEEEEEchHHHHHHHHhhcCceEEEeccCCchhhHHHHHHHHhhc-ccceeecccccc
Confidence 46677777776654 789999999999999999988 356789999999999999999998 999999999999
Q ss_pred cccCccCccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 326 NSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 326 ~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
+|+|+|+++.||+++.| .+...|+||+||++|.|+
T Consensus 89 rGiDi~~v~~VI~~d~P-~~~~~yihR~GR~gR~g~ 123 (162)
T d1fuka_ 89 RGIDVQQVSLVINYDLP-ANKENYIHRIGRGGRFGR 123 (162)
T ss_dssp TTCCCCSCSEEEESSCC-SSGGGGGGSSCSCC----
T ss_pred ccccCCCceEEEEeccc-hhHHHHHhhccccccCCC
Confidence 99999999999999666 599999999999999985
No 10
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.82 E-value=9.6e-20 Score=146.95 Aligned_cols=116 Identities=19% Similarity=0.272 Sum_probs=100.6
Q ss_pred cHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCcc
Q 015196 252 KFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDN 326 (411)
Q Consensus 252 k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~ 326 (411)
|+..+..+++.+. +.++||||++.+.++.++..| .+..+||+++..+|..+++.|++| ++++||||+++++
T Consensus 21 K~~~L~~ll~~~~---~~k~iiF~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~fk~g-~~~iLv~Td~~~r 96 (168)
T d2j0sa2 21 KFDTLCDLYDTLT---ITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSG-ASRVLISTDVWAR 96 (168)
T ss_dssp HHHHHHHHHHHHT---SSEEEEECSSHHHHHHHHHHHHHTTCCCEEECTTSCHHHHHHHHHHHHHT-SSCEEEECGGGSS
T ss_pred HHHHHHHHHHhCC---CCceEEEeeeHHHHHHHHHHhhhcccchhhhhhhhhHHHHHHHHHHHhcC-CccEEeccchhcc
Confidence 5566667776554 789999999999999999888 356799999999999999999998 9999999999999
Q ss_pred ccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCC
Q 015196 327 SIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTD 385 (411)
Q Consensus 327 Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~ 385 (411)
|+|+|++++||+++.| ++...|+||+||+||.|. .+..|.++.++
T Consensus 97 GiDi~~v~~VIn~d~P-~~~~~yihR~GR~gR~g~-------------~G~~i~~~~~~ 141 (168)
T d2j0sa2 97 GLDVPQVSLIINYDLP-NNRELYIHRIGRSGRYGR-------------KGVAINFVKND 141 (168)
T ss_dssp SCCCTTEEEEEESSCC-SSHHHHHHHHTTSSGGGC-------------CEEEEEEEEGG
T ss_pred cccccCcceEEEecCC-cCHHHHHhhhccccccCC-------------CcEEEEEECHH
Confidence 9999999999998665 599999999999999985 24556676654
No 11
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.82 E-value=9.6e-20 Score=145.28 Aligned_cols=94 Identities=18% Similarity=0.294 Sum_probs=85.3
Q ss_pred CCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEecC
Q 015196 267 RGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQISS 341 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~~~ 341 (411)
.+.++||||.++++++.++..| .+..+||+++..+|..++++|++| +++|||+|+++++|+|+|++++||+++.
T Consensus 30 ~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~~eR~~~l~~F~~G-~~~vLVaT~v~~~GiDip~V~~Vi~~~~ 108 (174)
T d1c4oa2 30 RGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLG-HYDCLVGINLLREGLDIPEVSLVAILDA 108 (174)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCHHHHHHHHHHHHTT-SCSEEEESCCCCTTCCCTTEEEEEETTT
T ss_pred cCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccchHHHHHHHHHHHCC-CeEEEEeeeeeeeeccCCCCcEEEEecc
Confidence 4889999999999999999999 467899999999999999999998 9999999999999999999999999854
Q ss_pred CC----CCHHHHHHHhhcccccCC
Q 015196 342 HA----GSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 342 ~~----~s~~~~~Q~~GR~~R~~~ 361 (411)
+. .|...|+|++||++|.++
T Consensus 109 ~~~~~~~~~~~~iq~~GR~gR~~~ 132 (174)
T d1c4oa2 109 DKEGFLRSERSLIQTIGRAARNAR 132 (174)
T ss_dssp TSCSGGGSHHHHHHHHGGGTTSTT
T ss_pred ccccccchhHHHHHHhhhhhhcCC
Confidence 31 245789999999999884
No 12
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.81 E-value=1.9e-19 Score=143.80 Aligned_cols=105 Identities=24% Similarity=0.317 Sum_probs=91.8
Q ss_pred CcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCc
Q 015196 251 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGD 325 (411)
Q Consensus 251 ~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~ 325 (411)
.|...+..+++ ..+.++||||++++.++.+++.| .+..+||+++..+|..++++|++| +.++||||++++
T Consensus 15 ~K~~~L~~ll~----~~~~k~IIF~~s~~~~~~l~~~L~~~g~~~~~~~~~~~~~~r~~~~~~f~~~-~~~ilv~T~~~~ 89 (155)
T d1hv8a2 15 ERFEALCRLLK----NKEFYGLVFCKTKRDTKELASMLRDIGFKAGAIHGDLSQSQREKVIRLFKQK-KIRILIATDVMS 89 (155)
T ss_dssp GHHHHHHHHHC----STTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECSSSCHHHHHHHHHHHHTT-SSSEEEECTTHH
T ss_pred HHHHHHHHHHc----cCCCCEEEEECchHHHHHHHhhhcccccccccccccchhhhhhhhhhhhhcc-cceeeeehhHHh
Confidence 34455555553 23568999999999999999998 356789999999999999999998 999999999999
Q ss_pred cccCccCccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 326 NSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 326 ~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
+|+|+|++++||+++.| +|...|+|++||++|.|+
T Consensus 90 ~Gid~~~v~~Vi~~d~p-~~~~~y~qr~GR~gR~g~ 124 (155)
T d1hv8a2 90 RGIDVNDLNCVINYHLP-QNPESYMHRIGRTGRAGK 124 (155)
T ss_dssp HHCCCSCCSEEEESSCC-SCHHHHHHHSTTTCCSSS
T ss_pred hhhhhccCcEEEEecCC-CCHHHHHHHHHhcCcCCC
Confidence 99999999999998666 599999999999999985
No 13
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.80 E-value=1.2e-19 Score=155.33 Aligned_cols=151 Identities=13% Similarity=0.107 Sum_probs=114.3
Q ss_pred CCCCCChhHHHHHHHHHh---CCCCcceEEEcCCCCCHHHHHHHHHH---hcCCceEEEEcChhhHHHHHHHHHHHhCCC
Q 015196 22 PHAQPRPYQEKSLSKMFG---NGRARSGIIVLPCGAGKSLVGVSAAC---RIKKSCLCLATNAVSVDQWAFQFKLWSTIQ 95 (411)
Q Consensus 22 ~~~~l~~~Q~~ai~~~~~---~~~~~~~ll~~~tG~GKT~~a~~~~~---~~~~~~lil~P~~~l~~q~~~~~~~~~~~~ 95 (411)
-.|+|++.|+++++.+.. .+.+...++.+.||||||.+|+.++. ..+..+++++|+..|+.|+...|.++++..
T Consensus 80 LPFeLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~ 159 (264)
T d1gm5a3 80 LPFKLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEAGFQTAFMVPTSILAIQHYRRTVESFSKF 159 (264)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHHTSCEEEECSCHHHHHHHHHHHHHHHTCS
T ss_pred ccccCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhcccceeEEeehHhhhHHHHHHHHHhhhhc
Confidence 447899999999999853 44556789999999999999888764 457899999999999999999999998766
Q ss_pred CCcEEEEcCchhh---------hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHHHH
Q 015196 96 DDQICRFTSDSKE---------RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVI 166 (411)
Q Consensus 96 ~~~v~~~~~~~~~---------~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~ 166 (411)
+..+..+++.... ...+..+|+|+|+..+... +...+.++||+||-|+++-.+...+.
T Consensus 160 ~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~-------------~~f~~LglviiDEqH~fgv~Qr~~l~ 226 (264)
T d1gm5a3 160 NIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQED-------------VHFKNLGLVIIDEQHRFGVKQREALM 226 (264)
T ss_dssp SCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHC-------------CCCSCCCEEEEESCCCC-----CCCC
T ss_pred cccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCC-------------CCccccceeeeccccccchhhHHHHH
Confidence 6678888775432 1246789999999866432 22356789999999999877655444
Q ss_pred HhhccccEEEEeeecccCc
Q 015196 167 SLTKSHCKLGLTATLVRED 185 (411)
Q Consensus 167 ~~~~~~~~i~lSATp~~~~ 185 (411)
.......++.|||||....
T Consensus 227 ~~~~~~~~l~~SATPiprt 245 (264)
T d1gm5a3 227 NKGKMVDTLVMSATPIPRS 245 (264)
T ss_dssp SSSSCCCEEEEESSCCCHH
T ss_pred HhCcCCCEEEEECCCCHHH
Confidence 4444568999999998533
No 14
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.80 E-value=3.8e-19 Score=152.28 Aligned_cols=150 Identities=19% Similarity=0.273 Sum_probs=110.2
Q ss_pred CCCChhHHHHHHHHHhC-CCCcceEEEcCCCCCHHHHHHHHHHhc-----CCceEEEEcChhhHHHHHHHHHHHhCCCCC
Q 015196 24 AQPRPYQEKSLSKMFGN-GRARSGIIVLPCGAGKSLVGVSAACRI-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDD 97 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~-~~~~~~ll~~~tG~GKT~~a~~~~~~~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~ 97 (411)
.+|+|||.++++.+... ....++++..++|.|||+++++++..+ ..++||+|| ..+..||.+++.++... .
T Consensus 11 ~~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~~~~~~~~~~~~~~~LIv~p-~~l~~~W~~e~~~~~~~--~ 87 (230)
T d1z63a1 11 ANLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIAVFSDAKKENELTPSLVICP-LSVLKNWEEELSKFAPH--L 87 (230)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHHHHHHHHHTTCCSSEEEEEC-STTHHHHHHHHHHHCTT--S
T ss_pred cchhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHHhhhhhhhcccccccceecc-hhhhhHHHHHHHhhccc--c
Confidence 47999999999876432 122478999999999999998887543 258999999 56799999999998542 3
Q ss_pred cEEEEcCchhhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch--hHHHHHHhhccccEE
Q 015196 98 QICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH--MFRKVISLTKSHCKL 175 (411)
Q Consensus 98 ~v~~~~~~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~--~~~~~~~~~~~~~~i 175 (411)
.+.............+.+|++++|+.+... ..+...++++||+||+|.+.+. ........+.+.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~vvi~~~~~~~~~-----------~~l~~~~~~~vI~DEah~~k~~~s~~~~~~~~l~a~~r~ 156 (230)
T d1z63a1 88 RFAVFHEDRSKIKLEDYDIILTTYAVLLRD-----------TRLKEVEWKYIVIDEAQNIKNPQTKIFKAVKELKSKYRI 156 (230)
T ss_dssp CEEECSSSTTSCCGGGSSEEEEEHHHHTTC-----------HHHHTCCEEEEEEETGGGGSCTTSHHHHHHHTSCEEEEE
T ss_pred cceeeccccchhhccCcCEEEeeHHHHHhH-----------HHHhcccceEEEEEhhhcccccchhhhhhhhhhccceEE
Confidence 444444433333344578999999987543 2244568899999999999865 233345556777899
Q ss_pred EEeeecccCchh
Q 015196 176 GLTATLVREDER 187 (411)
Q Consensus 176 ~lSATp~~~~~~ 187 (411)
+|||||..+...
T Consensus 157 ~LTgTPi~n~~~ 168 (230)
T d1z63a1 157 ALTGTPIENKVD 168 (230)
T ss_dssp EECSSCSTTCHH
T ss_pred EEecchHHhHHH
Confidence 999999977654
No 15
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.80 E-value=1.5e-19 Score=141.60 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=89.8
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhhhcCCCcEEEEecce
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKERFRGNAGVVVTTYNM 123 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~I~v~t~~~ 123 (411)
+.++|.+|||+|||+++...+.+.+.++++++|++.|++||...+.++++.. .+....... ......+.++|++.
T Consensus 9 ~~~ll~apTGsGKT~~~~~~~~~~~~~vli~~P~~~l~~q~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~ 83 (136)
T d1a1va1 9 QVAHLHAPTGSGKSTKVPAAYAAQGYKVLVLNPSVAATLGFGAYMSKAHGVD---PNIRTGVRT--ITTGSPITYSTYGK 83 (136)
T ss_dssp EEEEEECCTTSCTTTHHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHHSCC---CEEECSSCE--ECCCCSEEEEEHHH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHcCCcEEEEcChHHHHHHHHHHHHHHhhcc---ccccccccc--cccccceEEEeeee
Confidence 5889999999999999888888889999999999999999999999987543 233333222 12346688888876
Q ss_pred ecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchh---HHHHHHhhc---cccEEEEeeec
Q 015196 124 VAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM---FRKVISLTK---SHCKLGLTATL 181 (411)
Q Consensus 124 l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~---~~~~~~~~~---~~~~i~lSATp 181 (411)
+..... .. ..++++||+||+|++.... +..++..+. ...+++|||||
T Consensus 84 ~~~~~~---------~~--~~~~~~vIiDE~H~~~~~~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 84 FLADGG---------CS--GGAYDIIICDECHSTDATSILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp HHHTTG---------GG--GCCCSEEEEETTTCCSHHHHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred eccccc---------hh--hhcCCEEEEecccccCHHHHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 543321 11 2578999999999998763 444444432 33689999998
No 16
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.80 E-value=4e-19 Score=149.22 Aligned_cols=150 Identities=18% Similarity=0.179 Sum_probs=120.0
Q ss_pred CCCCCCChhHHHHHHHHH---hCCCCcceEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcChhhHHHHHHHHHHHhCC
Q 015196 21 KPHAQPRPYQEKSLSKMF---GNGRARSGIIVLPCGAGKSLVGVSAACR---IKKSCLCLATNAVSVDQWAFQFKLWSTI 94 (411)
Q Consensus 21 ~~~~~l~~~Q~~ai~~~~---~~~~~~~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~~~l~~q~~~~~~~~~~~ 94 (411)
...+.+.+-|.++++.+. ..+.+...++++.||||||.+++.++.. .++.+++++|+..|+.|+..+|.++++.
T Consensus 51 ~lP~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~ 130 (233)
T d2eyqa3 51 SFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFAN 130 (233)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHSTT
T ss_pred ccccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHcCCceEEEccHHHhHHHHHHHHHHHHhh
Confidence 345899999999999884 3445567899999999999998887644 4789999999999999999999998877
Q ss_pred CCCcEEEEcCchhh---------hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHHH
Q 015196 95 QDDQICRFTSDSKE---------RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKV 165 (411)
Q Consensus 95 ~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~ 165 (411)
.+..+..+++.... ...+..+|+|+|+..+... +...+.++||+||-|+++-.+...+
T Consensus 131 ~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~~~-------------~~f~~LgLiIiDEeH~fg~kQ~~~l 197 (233)
T d2eyqa3 131 WPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSD-------------VKFKDLGLLIVDEEHRFGVRHKERI 197 (233)
T ss_dssp TTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHHSC-------------CCCSSEEEEEEESGGGSCHHHHHHH
T ss_pred CCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhccC-------------CccccccceeeechhhhhhHHHHHH
Confidence 67788888775432 1236689999999765432 2235778999999999998877766
Q ss_pred HHhhccccEEEEeeeccc
Q 015196 166 ISLTKSHCKLGLTATLVR 183 (411)
Q Consensus 166 ~~~~~~~~~i~lSATp~~ 183 (411)
........++.+||||..
T Consensus 198 ~~~~~~~~~l~~SATPip 215 (233)
T d2eyqa3 198 KAMRANVDILTLTATPIP 215 (233)
T ss_dssp HHHHTTSEEEEEESSCCC
T ss_pred HhhCCCCCEEEEecchhH
Confidence 666666789999999985
No 17
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.80 E-value=3.2e-20 Score=156.43 Aligned_cols=144 Identities=18% Similarity=0.186 Sum_probs=107.0
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcC
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTS 104 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~ 104 (411)
.+||||++++.+++.+. ++++.+|||+|||+++..++....+++++++|+++|+.|+.+++..+... ......
T Consensus 25 ~~rp~Q~~ai~~~l~g~---~vlv~apTGsGKT~~~~~~~~~~~~~~~~v~P~~~L~~q~~~~l~~~~~~----~~~~~~ 97 (206)
T d1oywa2 25 QFRPGQEEIIDTVLSGR---DCLVVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVA----AACLNS 97 (206)
T ss_dssp SCCTTHHHHHHHHHTTC---CEEEECSCHHHHHHHHHHHHHHSSSEEEEECSCHHHHHHHHHHHHHTTCC----EEEECT
T ss_pred CCCHHHHHHHHHHHcCC---CEEEEcCCCCCCcchhhhhhhhccCceEEeccchhhhhhHHHHHHhhccc----cccccc
Confidence 78999999999998875 89999999999999999888888899999999999999999999886421 222221
Q ss_pred c-h--------hhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch---------hHHHHH
Q 015196 105 D-S--------KERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH---------MFRKVI 166 (411)
Q Consensus 105 ~-~--------~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~---------~~~~~~ 166 (411)
. . .........|+++|++.+.... .........++++|+||||.+... ....+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~--------~~~~~~~~~v~~lviDEaH~~~~~~~~~~~~~~~~~~l~ 169 (206)
T d1oywa2 98 TQTREQQLEVMTGCRTGQIRLLYIAPERLMLDN--------FLEHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLR 169 (206)
T ss_dssp TSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTT--------HHHHHTTSCEEEEEESSGGGGCTTSSCCCHHHHGGGGHH
T ss_pred ccccccchhHHHHHhcCCceEEEEechhhhchh--------hcccchhheeeeeeeeeeeeeeccccchHHHHHHHHHHH
Confidence 1 1 0112356789999988765432 223344567889999999988743 112234
Q ss_pred HhhccccEEEEeeeccc
Q 015196 167 SLTKSHCKLGLTATLVR 183 (411)
Q Consensus 167 ~~~~~~~~i~lSATp~~ 183 (411)
..++..++++||||+..
T Consensus 170 ~~~~~~~ii~lSATl~~ 186 (206)
T d1oywa2 170 QRFPTLPFMALTATADD 186 (206)
T ss_dssp HHCTTSCEEEEESCCCH
T ss_pred HhCCCCceEEEEeCCCH
Confidence 44456689999999853
No 18
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.80 E-value=4.5e-19 Score=146.86 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=92.2
Q ss_pred cHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCcc
Q 015196 252 KFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDN 326 (411)
Q Consensus 252 k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~ 326 (411)
|+..+..+++.. .+.++||||++++.++.++..| .+..+||+++..+|..+++.|++| +++|||+|+++++
T Consensus 17 k~~~L~~~l~~~---~~~~~IIF~~t~~~~~~l~~~l~~~~~~~~~~h~~~~~~~r~~~~~~f~~g-~~~ilvaTd~~~~ 92 (200)
T d1oywa3 17 PLDQLMRYVQEQ---RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRD-DLQIVVATVAFGM 92 (200)
T ss_dssp HHHHHHHHHHHT---TTCCEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHTT-SCSEEEECTTSCT
T ss_pred HHHHHHHHHHhc---CCCCEEEEEeeehhhHHhhhhhccCCceeEEecCCCcHHHHHHHHHHHhcc-cceEEEecchhhh
Confidence 444444455444 3789999999999999999988 366789999999999999999998 9999999999999
Q ss_pred ccCccCccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 327 SIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 327 Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
|+|+|++++||.+..| .|...|+|++||+||.|.
T Consensus 93 GiD~p~v~~VI~~~~P-~~~~~y~qr~GR~gR~g~ 126 (200)
T d1oywa3 93 GINKPNVRFVVHFDIP-RNIESYYQETGRAGRDGL 126 (200)
T ss_dssp TTCCTTCCEEEESSCC-SSHHHHHHHHTTSCTTSS
T ss_pred ccCCCCCCEEEECCCc-cchHHHHHHhhhhhcCCC
Confidence 9999999999999665 699999999999999985
No 19
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.79 E-value=4.4e-19 Score=143.90 Aligned_cols=94 Identities=17% Similarity=0.286 Sum_probs=86.1
Q ss_pred CCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEecC
Q 015196 267 RGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQISS 341 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~~~ 341 (411)
.+.++||||+++++++.++..| .+..+||++++.+|..++++|++| +++|||||+++++|+|+|++++||+++.
T Consensus 30 ~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~eR~~~l~~Fr~g-~~~vLVaTdv~~rGiDip~v~~VI~~d~ 108 (181)
T d1t5la2 30 RNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLG-KYDVLVGINLLREGLDIPEVSLVAILDA 108 (181)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHHT-SCSEEEESCCCSSSCCCTTEEEEEETTT
T ss_pred cCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHHHHHHHHHHHCC-CCCEEEehhHHHccCCCCCCCEEEEecC
Confidence 4679999999999999999999 356899999999999999999998 9999999999999999999999999976
Q ss_pred CC----CCHHHHHHHhhcccccCC
Q 015196 342 HA----GSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 342 ~~----~s~~~~~Q~~GR~~R~~~ 361 (411)
|. .|...|+||+||+||.|.
T Consensus 109 p~~~~~~s~~~yi~R~GRagR~g~ 132 (181)
T d1t5la2 109 DKEGFLRSERSLIQTIGRAARNAN 132 (181)
T ss_dssp TSCSGGGSHHHHHHHHGGGTTSTT
T ss_pred CcccccccHHHHHHHHHhhccccC
Confidence 63 268899999999999884
No 20
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.78 E-value=1.3e-19 Score=156.02 Aligned_cols=146 Identities=18% Similarity=0.235 Sum_probs=101.6
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcChhhHHHHHHHHHHHhCCCCCc--
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR---IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQ-- 98 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~-- 98 (411)
.+|+++|++++..++.+. ++++.||||+|||++++.++.. .++++++++|+++|+.||.++|.+++......
T Consensus 42 ~~p~~~Q~~~i~~~l~g~---~~~i~apTGsGKT~~~~~~~~~~~~~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~ 118 (237)
T d1gkub1 42 GEPRAIQKMWAKRILRKE---SFAATAPTGVGKTSFGLAMSLFLALKGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTE 118 (237)
T ss_dssp CSCCHHHHHHHHHHHTTC---CEECCCCBTSCSHHHHHHHHHHHHTTSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGG
T ss_pred CCCCHHHHHHHHHHHCCC---CEEEEecCCChHHHHHHHHHHHHHHhcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceE
Confidence 478999999999999875 8999999999999987766543 35799999999999999999999885432221
Q ss_pred --EEEEcCchhh-------hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch--hHHHHHH
Q 015196 99 --ICRFTSDSKE-------RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH--MFRKVIS 167 (411)
Q Consensus 99 --v~~~~~~~~~-------~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~--~~~~~~~ 167 (411)
++...+.... ......+|+|+|++.+..... ...++++||+||+|.+... ...+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~~~------------~~~~~~~vVvDE~d~~l~~~~~~~~~~~ 186 (237)
T d1gkub1 119 NLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKHYR------------ELGHFDFIFVDDVDAILKASKNVDKLLH 186 (237)
T ss_dssp GSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHCST------------TSCCCSEEEESCHHHHHTSTHHHHHHHH
T ss_pred EEEeeeecccchhhhhhhhccccccceeccChHHHHHhhh------------hcCCCCEEEEEChhhhhhcccchhHHHH
Confidence 2233332111 112346899999987654321 1257899999999987533 2222222
Q ss_pred hh--------------ccccEEEEeeecccC
Q 015196 168 LT--------------KSHCKLGLTATLVRE 184 (411)
Q Consensus 168 ~~--------------~~~~~i~lSATp~~~ 184 (411)
.+ ....++++|||+.+.
T Consensus 187 ~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~ 217 (237)
T d1gkub1 187 LLGFHYDLKTKSWVGEARGCLMVSTATAKKG 217 (237)
T ss_dssp HTTEEEETTTTEEEECCSSEEEECCCCSCCC
T ss_pred hcCChHHHHHHHhhCCCCCeEEEEeCCCCcc
Confidence 21 112478899998654
No 21
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.78 E-value=7.6e-19 Score=141.72 Aligned_cols=117 Identities=14% Similarity=0.254 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccc
Q 015196 253 FRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNS 327 (411)
Q Consensus 253 ~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~G 327 (411)
...+..+++.. ...++||||++.+.++.++..| .+..+||+++..+|..++++|++| ..++||||+++++|
T Consensus 20 ~~~L~~ll~~~---~~~~~lIF~~~~~~~~~l~~~l~~~~~~~~~~hg~~~~~~R~~~~~~F~~g-~~~ilv~Td~~~~G 95 (168)
T d2rb4a1 20 YQALCNIYGSI---TIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRASIIQRFRDG-KEKVLITTNVCARG 95 (168)
T ss_dssp HHHHHHHHTTS---CCSEEEEECSCHHHHHHHHHHHHTTTCCEEEECSSCCHHHHHHHHHHHHTT-SCSEEEECCSCCTT
T ss_pred HHHHHHHHHhC---CCCcEEEEcCHHHHHHHHHHHHHhcCCcceecccchhhHHHHHHhhhhcCC-ceeeeechhhhhhh
Confidence 34455555433 4789999999999999999888 356899999999999999999998 99999999999999
Q ss_pred cCccCccEEEEecCCCC-----CHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCc
Q 015196 328 IDIPEANVIIQISSHAG-----SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDT 386 (411)
Q Consensus 328 id~~~~~~vi~~~~~~~-----s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~ 386 (411)
+|+|++++||.++.|+. +...|+||+||++|.|. .+..|.++.++.
T Consensus 96 id~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~-------------~g~~i~~~~~~d 146 (168)
T d2rb4a1 96 IDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGK-------------KGLAFNMIEVDE 146 (168)
T ss_dssp TCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----C-------------CEEEEEEECGGG
T ss_pred hccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCC-------------ceEEEEEEcHHH
Confidence 99999999999876642 57889999999999985 355677776553
No 22
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.78 E-value=9.5e-19 Score=155.74 Aligned_cols=152 Identities=15% Similarity=0.255 Sum_probs=107.0
Q ss_pred CCCChhHHHHHHHHHhC------CCCcceEEEcCCCCCHHHHHHHHHHhc----------CCceEEEEcChhhHHHHHHH
Q 015196 24 AQPRPYQEKSLSKMFGN------GRARSGIIVLPCGAGKSLVGVSAACRI----------KKSCLCLATNAVSVDQWAFQ 87 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~------~~~~~~ll~~~tG~GKT~~a~~~~~~~----------~~~~lil~P~~~l~~q~~~~ 87 (411)
-.|||||.++++-+... ....++++..++|.|||+.+++.+..+ ..++||+||. +|..||.++
T Consensus 54 ~~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia~l~~l~~~~~~~~~~~~~~LIV~P~-sl~~qW~~E 132 (298)
T d1z3ix2 54 KVLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPS-SLVRNWYNE 132 (298)
T ss_dssp TTCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHHHHHHHHHCCTTSSCSCSCEEEEECH-HHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHHHHHHHHHhcccccCCCCcEEEEccc-hhhHHHHHH
Confidence 47999999999876421 123478999999999999887765432 1369999995 589999999
Q ss_pred HHHHhCCCCCcEEEEcCchhhh-------------hcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecC
Q 015196 88 FKLWSTIQDDQICRFTSDSKER-------------FRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEV 154 (411)
Q Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~-------------~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~ 154 (411)
|.+|++.....+ .+.+..... .....+++++||+.+.... +.+...++++||+||+
T Consensus 133 i~k~~~~~~~~v-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~----------~~l~~~~~~~vI~DEa 201 (298)
T d1z3ix2 133 VGKWLGGRVQPV-AIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHA----------EVLHKGKVGLVICDEG 201 (298)
T ss_dssp HHHHHGGGCCEE-EECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHT----------TTTTTSCCCEEEETTG
T ss_pred HHhhcCCceeEE-EEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccch----------hcccccceeeeecccc
Confidence 999975433333 333322211 1123579999998775432 3334567899999999
Q ss_pred CCCCch--hHHHHHHhhccccEEEEeeecccCchh
Q 015196 155 HVVPAH--MFRKVISLTKSHCKLGLTATLVREDER 187 (411)
Q Consensus 155 H~~~~~--~~~~~~~~~~~~~~i~lSATp~~~~~~ 187 (411)
|++.+. ...+....+...++++|||||..++..
T Consensus 202 H~ikn~~s~~~~a~~~l~~~~rllLTGTPi~N~~~ 236 (298)
T d1z3ix2 202 HRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLL 236 (298)
T ss_dssp GGCCTTCHHHHHHHHHHCCSEEEEECSSCSGGGGG
T ss_pred cccccccchhhhhhhccccceeeeecchHHhhhhH
Confidence 999875 333455566788899999999976543
No 23
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=1.4e-18 Score=146.51 Aligned_cols=148 Identities=18% Similarity=0.159 Sum_probs=110.1
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh-c-----CCceEEEEcChhhHHHHHHHHHHHhCCCCC
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR-I-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDD 97 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~-~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~ 97 (411)
..|+|.|..++..++.+. +.++.||||+|||++++.++.. + ..++++++|+++|+.|..+.+.++......
T Consensus 38 ~~pt~IQ~~aIp~il~g~---dvi~~a~TGSGKTlayllPil~~l~~~~~~~~~lil~PtreLa~Qi~~~~~~l~~~~~i 114 (222)
T d2j0sa1 38 EKPSAIQQRAIKQIIKGR---DVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNV 114 (222)
T ss_dssp CSCCHHHHHHHHHHHTTC---CEEEECCTTSSHHHHHHHHHHHTCCTTSCSCCEEEECSSHHHHHHHHHHHHHHTTTTTC
T ss_pred CCCCHHHHHHHHHHHCCC---CeEEEcCcchhhhhhhcccccccccccccCceeEEecchHHHHHHHHHHHHHHhCccce
Confidence 479999999999999875 9999999999999998887643 2 237999999999999999999998766666
Q ss_pred cEEEEcCchhh-----hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHH----HHHh
Q 015196 98 QICRFTSDSKE-----RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK----VISL 168 (411)
Q Consensus 98 ~v~~~~~~~~~-----~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~----~~~~ 168 (411)
.+..+.++... ......+|+|+|++.+...... ..+......++|+||||.+.+..+.. ++..
T Consensus 115 ~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~--------~~~~~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~ 186 (222)
T d2j0sa1 115 QCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRR--------RSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRY 186 (222)
T ss_dssp CEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHT--------TSSCCTTCCEEEEETHHHHTSTTTHHHHHHHHTT
T ss_pred eEEEEeecccchhhHHHhccCCeEEeCCCCcHHhcccc--------cccccccceeeeecchhHhhhcCcHHHHHHHHHh
Confidence 67666654321 2234689999999877542111 11122456799999999999875544 3333
Q ss_pred hc-cccEEEEeeecc
Q 015196 169 TK-SHCKLGLTATLV 182 (411)
Q Consensus 169 ~~-~~~~i~lSATp~ 182 (411)
++ ..+++++|||..
T Consensus 187 l~~~~Q~ilfSAT~~ 201 (222)
T d2j0sa1 187 LPPATQVVLISATLP 201 (222)
T ss_dssp SCTTCEEEEEESCCC
T ss_pred CCCCCEEEEEEEeCC
Confidence 33 347899999985
No 24
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.75 E-value=1.2e-18 Score=146.36 Aligned_cols=148 Identities=15% Similarity=0.111 Sum_probs=109.3
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc-----CCceEEEEcChhhHHHHHHHHHHHhCCCCCcE
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQI 99 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v 99 (411)
.|+|.|.+++..++.+. .+.++.+|||+|||++++.++... +.++++++|+++|+.|+.+.+..+.......+
T Consensus 26 ~pt~iQ~~~ip~~l~g~--~d~iv~a~TGsGKT~~~~l~~~~~~~~~~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v 103 (208)
T d1hv8a1 26 KPTDIQMKVIPLFLNDE--YNIVAQARTGSGKTASFAIPLIELVNENNGIEAIILTPTRELAIQVADEIESLKGNKNLKI 103 (208)
T ss_dssp SCCHHHHHHHHHHHHTC--SEEEEECCSSSSHHHHHHHHHHHHSCSSSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCE
T ss_pred CCCHHHHHHHHHHHcCC--CCeeeechhcccccceeecccccccccccCcceEEEeeccccchhhhhhhhhhcccCCeEE
Confidence 79999999999988764 378889999999999988876443 24899999999999999999999877666677
Q ss_pred EEEcCchhh----hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch----hHHHHHHhhc-
Q 015196 100 CRFTSDSKE----RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH----MFRKVISLTK- 170 (411)
Q Consensus 100 ~~~~~~~~~----~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~----~~~~~~~~~~- 170 (411)
....+.... ......+|+|+|++.+.....+ ..+...+..++|+||||++.+. ...+++..++
T Consensus 104 ~~~~g~~~~~~~~~~l~~~~IlV~TP~~l~~~l~~--------~~~~~~~l~~lViDEad~l~~~~~~~~i~~I~~~~~~ 175 (208)
T d1hv8a1 104 AKIYGGKAIYPQIKALKNANIVVGTPGRILDHINR--------GTLNLKNVKYFILDEADEMLNMGFIKDVEKILNACNK 175 (208)
T ss_dssp EEECTTSCHHHHHHHHHTCSEEEECHHHHHHHHHT--------TCSCTTSCCEEEEETHHHHHTTTTHHHHHHHHHTSCS
T ss_pred EEeeCCCChHHHHHhcCCCCEEEEChHHHHHHHHc--------CCCCcccCcEEEEEChHHhhcCCChHHHHHHHHhCCC
Confidence 777664321 1124589999999876432211 1112356679999999987654 3444455443
Q ss_pred cccEEEEeeecc
Q 015196 171 SHCKLGLTATLV 182 (411)
Q Consensus 171 ~~~~i~lSATp~ 182 (411)
..+++++|||..
T Consensus 176 ~~Q~i~~SAT~~ 187 (208)
T d1hv8a1 176 DKRILLFSATMP 187 (208)
T ss_dssp SCEEEEECSSCC
T ss_pred CCeEEEEEccCC
Confidence 357899999975
No 25
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=3.1e-18 Score=144.36 Aligned_cols=148 Identities=14% Similarity=0.082 Sum_probs=108.8
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH-hc-----CCceEEEEcChhhHHHHHHHHHHHhCCCCCc
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC-RI-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQ 98 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~-~~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~ 98 (411)
.|+|.|+.++..++.+. +.++.||||+|||++++.++. ++ ..++|+++|+++|+.|..+.+..+.......
T Consensus 34 ~pt~iQ~~aip~il~g~---dvl~~a~TGsGKTlayllp~l~~i~~~~~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~ 110 (218)
T d2g9na1 34 KPSAIQQRAILPCIKGY---DVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGAS 110 (218)
T ss_dssp SCCHHHHHHHHHHHHTC---CEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEECSSHHHHHHHHHHHHHHHTTTTCC
T ss_pred CCCHHHHHHHHHHHcCC---CEEEEcccchhhhhhhhhhhhheecccccCccEEEEcccchhhhhHHHHHhhhcccccee
Confidence 69999999999999876 899999999999999888764 32 2479999999999999999999987665555
Q ss_pred EEEEcCchh------hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch----hHHHHHHh
Q 015196 99 ICRFTSDSK------ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH----MFRKVISL 168 (411)
Q Consensus 99 v~~~~~~~~------~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~----~~~~~~~~ 168 (411)
+....++.. .......+|+|+|+..+.....+. .+......++|+||||.+.+. ....++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~--------~~~~~~l~~lVlDEaD~ll~~~f~~~~~~Il~~ 182 (218)
T d2g9na1 111 CHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRR--------YLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQK 182 (218)
T ss_dssp EEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTT--------SSCSTTCCEEEEESHHHHHHTTCHHHHHHHHHH
T ss_pred EEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcC--------CcccccceEEEeeecchhhcCchHHHHHHHHHh
Confidence 555444221 112245799999998775432111 112346679999999998865 34445555
Q ss_pred hcc-ccEEEEeeeccc
Q 015196 169 TKS-HCKLGLTATLVR 183 (411)
Q Consensus 169 ~~~-~~~i~lSATp~~ 183 (411)
++. .+++++|||...
T Consensus 183 ~~~~~Q~il~SAT~~~ 198 (218)
T d2g9na1 183 LNSNTQVVLLSATMPS 198 (218)
T ss_dssp SCTTCEEEEEESCCCH
T ss_pred CCCCCeEEEEEecCCH
Confidence 543 578999999953
No 26
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.73 E-value=4.3e-18 Score=150.61 Aligned_cols=126 Identities=24% Similarity=0.336 Sum_probs=100.8
Q ss_pred CcHHHHHHHHH-HhhhcCCCeEEEEecChhHHHHHHHHhC-----CceeeC--------CCCHHHHHHHHHHhcCCCCee
Q 015196 251 NKFRACEFLIR-FHEQQRGDKIIVFADNLFALTEYAMKLR-----KPMIYG--------ATSHVERTKILQAFKCSRDLN 316 (411)
Q Consensus 251 ~k~~~~~~l~~-~~~~~~~~~~ivf~~~~~~~~~l~~~l~-----~~~i~g--------~~~~~~r~~~~~~f~~~~~~~ 316 (411)
.|+..+..++. ......+.++||||++.+.++.+++.|. ...++| .++..+|..+++.|++| +++
T Consensus 143 pK~~~l~~~l~~~~~~~~~~k~iiF~~~~~~~~~~~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~F~~g-~~~ 221 (286)
T d1wp9a2 143 PKMDKLKEIIREQLQRKQNSKIIVFTNYRETAKKIVNELVKDGIKAKRFVGQASKENDRGLSQREQKLILDEFARG-EFN 221 (286)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEECSCHHHHHHHHHHHHHTTCCEEEECCSSCC-------CCHHHHHHHHHHHT-SCS
T ss_pred cHHHHHHHHHHHHHHhCCCCcEEEEeCcHHhHHHHHHHHHHcCCceEEeeccccccccchhchHHHHHHHHHHHcC-CCc
Confidence 45666666653 3333557899999999999999999982 233444 44555889999999998 999
Q ss_pred EEEeeccCccccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHH
Q 015196 317 TIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYS 392 (411)
Q Consensus 317 vlv~t~~~~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 392 (411)
|||+|+++++|+|+|++++||++++| +|+..|+|++||+||.++ +.+|.++++++.||.+.
T Consensus 222 vLv~T~~~~~Gld~~~~~~Vi~~d~~-~~~~~~~Qr~GR~gR~~~--------------~~~~~l~~~~~~ee~~~ 282 (286)
T d1wp9a2 222 VLVATSVGEEGLDVPEVDLVVFYEPV-PSAIRSIQRRGRTGRHMP--------------GRVIILMAKGTRDEAYY 282 (286)
T ss_dssp EEEECGGGGGGGGSTTCCEEEESSCC-HHHHHHHHHHTTSCSCCC--------------SEEEEEEETTSHHHHHH
T ss_pred EEEEccceeccccCCCCCEEEEeCCC-CCHHHHHHHHHhCCCCCC--------------CEEEEEEeCCCHHHHHH
Confidence 99999999999999999999999766 599999999999999763 55789999999997654
No 27
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.73 E-value=2.3e-18 Score=135.40 Aligned_cols=124 Identities=18% Similarity=0.206 Sum_probs=81.9
Q ss_pred cceEEEcCCCCCHHHHHHHHH----HhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhhhcCCCcEEEE
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA----CRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKERFRGNAGVVVT 119 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~----~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~I~v~ 119 (411)
.++++.||||+|||++++..+ ...+.++++++|++.+++|+.+.+..+ ..................+.++
T Consensus 8 ~~~il~~~tGsGKT~~~~~~~~~~~~~~~~~vli~~p~~~l~~q~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
T d1yksa1 8 MTTVLDFHPGAGKTRRFLPQILAECARRRLRTLVLAPTRVVLSEMKEAFHGL------DVKFHTQAFSAHGSGREVIDAM 81 (140)
T ss_dssp CEEEECCCTTSSTTTTHHHHHHHHHHHTTCCEEEEESSHHHHHHHHHHTTTS------CEEEESSCCCCCCCSSCCEEEE
T ss_pred CcEEEEcCCCCChhHHHHHHHHHHhhhcCceeeeeecchhHHHHHHHHhhhh------hhhhcccccccccccccchhhh
Confidence 588999999999998876554 244679999999999999988776443 2233222222222334566777
Q ss_pred ecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhH-----HHHHHhhccccEEEEeeecc
Q 015196 120 TYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMF-----RKVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 120 t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~-----~~~~~~~~~~~~i~lSATp~ 182 (411)
+...+... ........++++||+||||++....+ ...+......++++|||||.
T Consensus 82 ~~~~l~~~---------~~~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~~~~~~~~l~lTATPp 140 (140)
T d1yksa1 82 CHATLTYR---------MLEPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRARANESATILMTATPP 140 (140)
T ss_dssp EHHHHHHH---------HTSSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHHHTTSCEEEEECSSCT
T ss_pred hHHHHHHH---------HhccccccceeEEEEccccccChhhHHHHHHHHHHhhCCCCCEEEEEcCCC
Confidence 76655321 11222246889999999999865422 22333345668999999994
No 28
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.72 E-value=9e-18 Score=140.48 Aligned_cols=147 Identities=17% Similarity=0.127 Sum_probs=106.5
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh-c-----CCceEEEEcChhhHHHHHHHHHHHhCCC-CC
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR-I-----KKSCLCLATNAVSVDQWAFQFKLWSTIQ-DD 97 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~-~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~-~~ 97 (411)
.|+|.|++++..++.+. ++++.||||+|||++++.++.. . +..+++++|+++|+.|..+.+..+.... ..
T Consensus 25 ~pt~iQ~~aip~il~g~---dvl~~a~TGsGKTlayllP~l~~~~~~~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~ 101 (206)
T d1veca_ 25 KPSPIQEESIPIALSGR---DILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGA 101 (206)
T ss_dssp SCCHHHHHHHHHHHTTC---CEEEECCSSSTTHHHHHHHHHHHCCTTSCSCCEEEECSCHHHHHHHHHHHHHHTTTSSSC
T ss_pred CCCHHHHHHHHHHHcCC---CEEeeccCccccccccccchhhcccccccCcceEEEeecchhhHHHHHHHHHHhhcccCc
Confidence 79999999999999875 9999999999999998887643 2 2479999999999999999988775432 23
Q ss_pred cEEEEcCchh-----hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHH----HHHh
Q 015196 98 QICRFTSDSK-----ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK----VISL 168 (411)
Q Consensus 98 ~v~~~~~~~~-----~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~----~~~~ 168 (411)
.+....++.. .......+|+|+|+..+...... ..+...+..++|+||||.+.+..+.. ++..
T Consensus 102 ~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~--------~~~~~~~l~~lVlDEaD~ll~~~f~~~i~~I~~~ 173 (206)
T d1veca_ 102 KVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKK--------GVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILT 173 (206)
T ss_dssp CEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHT--------TCSCCTTCCEEEEETHHHHTSTTTHHHHHHHHHH
T ss_pred ccccccCCccHHHHHHHHHhccCeEEeCCccccccccc--------hhccccccceEEEeccccccccchHHHHHHHHHh
Confidence 3444444221 22346789999999877543211 11122456799999999998764443 4444
Q ss_pred h-ccccEEEEeeecc
Q 015196 169 T-KSHCKLGLTATLV 182 (411)
Q Consensus 169 ~-~~~~~i~lSATp~ 182 (411)
+ +..+++++|||..
T Consensus 174 ~~~~~Q~~l~SAT~~ 188 (206)
T d1veca_ 174 LPKNRQILLYSATFP 188 (206)
T ss_dssp SCTTCEEEEEESCCC
T ss_pred CCCCCEEEEEEecCC
Confidence 4 3457899999985
No 29
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=99.71 E-value=2.2e-17 Score=141.10 Aligned_cols=165 Identities=16% Similarity=0.186 Sum_probs=115.2
Q ss_pred ccccCCCCCCCcccCC-C-CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH-hc--------------CC
Q 015196 7 FRNDNVNPDLNMELKP-H-AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC-RI--------------KK 69 (411)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~-~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~-~~--------------~~ 69 (411)
|.+...++...-.+.. . ..|+|.|..++..++.+. ++++.||||+|||++++.++. ++ ..
T Consensus 23 F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~---dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~~~~~~~ 99 (238)
T d1wrba1 23 FDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHR---DIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRYSKTAYP 99 (238)
T ss_dssp SGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTC---CEEEECCTTSSHHHHHHHHHHHHHHTTCC------CCBCC
T ss_pred HHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCC---CEEEECCCCCCcceeeHHHHHHHHHhcccccccccCCCCc
Confidence 3344444443333332 2 479999999999999875 999999999999999887753 22 13
Q ss_pred ceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCch-----hhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcC
Q 015196 70 SCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDS-----KERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNR 144 (411)
Q Consensus 70 ~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~ 144 (411)
++++++|+++|+.|..+.+..+....+..+..+.++. ........+|+|+|++.+...... ..+.-.
T Consensus 100 ~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~--------~~~~l~ 171 (238)
T d1wrba1 100 KCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEK--------NKISLE 171 (238)
T ss_dssp SEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHT--------TSBCCT
T ss_pred eEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHcc--------Cceecc
Confidence 6999999999999999999888655555666665533 223345689999999977543211 111124
Q ss_pred CccEEEEecCCCCCchhHH----HHHHhhc-----cccEEEEeeecc
Q 015196 145 EWGLLLMDEVHVVPAHMFR----KVISLTK-----SHCKLGLTATLV 182 (411)
Q Consensus 145 ~~~lvIiDE~H~~~~~~~~----~~~~~~~-----~~~~i~lSATp~ 182 (411)
+..++|+||+|++....+. .++..+. ..+++++|||..
T Consensus 172 ~v~~lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~ 218 (238)
T d1wrba1 172 FCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFP 218 (238)
T ss_dssp TCCEEEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCC
T ss_pred ccceeeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCC
Confidence 6679999999998865433 3444332 237899999975
No 30
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.71 E-value=2.1e-17 Score=138.30 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=106.6
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc------CCceEEEEcChhhHHHHHHHHHHHhCCC-C
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI------KKSCLCLATNAVSVDQWAFQFKLWSTIQ-D 96 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~------~~~~lil~P~~~l~~q~~~~~~~~~~~~-~ 96 (411)
..|+|.|++++..++.+. ++++.||||+|||++++.++... ..++++++|+++|+.|..+.+..+.... .
T Consensus 22 ~~pt~iQ~~aip~il~g~---dvl~~A~TGsGKTla~~lp~l~~~~~~~~~~~~lil~PtreL~~qi~~~~~~~~~~~~~ 98 (207)
T d1t6na_ 22 EHPSEVQHECIPQAILGM---DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPN 98 (207)
T ss_dssp CCCCHHHHHHHHHHHTTC---CEEEECCTTSCHHHHHHHHHHHHCCCCTTCCCEEEECSCHHHHHHHHHHHHHHTTTSTT
T ss_pred CCCCHHHHHHHHHHHcCC---CeEEEeccccccccccccceeeeecccCCCceEEEEeccchhhHHHHHHHHHHHhhCCC
Confidence 379999999999999875 99999999999999988876432 2379999999999999999998876432 2
Q ss_pred CcEEEEcCchhh------hhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch-hHHH----H
Q 015196 97 DQICRFTSDSKE------RFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH-MFRK----V 165 (411)
Q Consensus 97 ~~v~~~~~~~~~------~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~-~~~~----~ 165 (411)
..+....++... ......+|+|+|++.+...... ..+.-.+..++|+||||++... .+.. +
T Consensus 99 ~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~--------~~~~l~~l~~lVlDEaD~ll~~~~~~~~i~~I 170 (207)
T d1t6na_ 99 VKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARN--------KSLNLKHIKHFILDECDKMLEQLDMRRDVQEI 170 (207)
T ss_dssp CCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHT--------TSSCCTTCCEEEEESHHHHHSSHHHHHHHHHH
T ss_pred ceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccC--------CceeccccceeehhhhhhhhhcCCcHHHHHHH
Confidence 345555553221 1134679999999877543211 1112245679999999998764 3433 3
Q ss_pred HHhhc-cccEEEEeeeccc
Q 015196 166 ISLTK-SHCKLGLTATLVR 183 (411)
Q Consensus 166 ~~~~~-~~~~i~lSATp~~ 183 (411)
...++ ..+++++|||...
T Consensus 171 ~~~~~~~~Q~il~SAT~~~ 189 (207)
T d1t6na_ 171 FRMTPHEKQVMMFSATLSK 189 (207)
T ss_dssp HHTSCSSSEEEEEESCCCT
T ss_pred HHhCCCCCEEEEEeeeCCH
Confidence 33333 3478999999853
No 31
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.70 E-value=5.4e-17 Score=134.63 Aligned_cols=106 Identities=16% Similarity=0.186 Sum_probs=87.0
Q ss_pred CCCeEEEEecChhHHHHHHHHh-----------------------------------CCceeeCCCCHHHHHHHHHHhcC
Q 015196 267 RGDKIIVFADNLFALTEYAMKL-----------------------------------RKPMIYGATSHVERTKILQAFKC 311 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l-----------------------------------~~~~i~g~~~~~~r~~~~~~f~~ 311 (411)
.+.++||||++++.++.++..| ++.++||+++..+|..+++.|++
T Consensus 39 ~~~~~LVF~~sRk~~~~~A~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~GIa~hh~~l~~~~r~~ie~~f~~ 118 (201)
T d2p6ra4 39 ENGGVLVFESTRRGAEKTAVKLSAITAKYVENEGLEKAILEENEGEMSRKLAECVRKGAAFHHAGLLNGQRRVVEDAFRR 118 (201)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHHHHTTCCCSSHHHHHHTTCCSHHHHHHHHHHHTTCCEECTTSCHHHHHHHHHHHHT
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHHHHHhhhchhHHHHHHHHhhhhhhhHHHHHHHhccHHHHHHHhhhhhHHHHHHHHhC
Confidence 3678999999998887776664 26789999999999999999999
Q ss_pred CCCeeEEEeeccCccccCccCccEEEEe-------cCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecC
Q 015196 312 SRDLNTIFLSKVGDNSIDIPEANVIIQI-------SSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVST 384 (411)
Q Consensus 312 ~~~~~vlv~t~~~~~Gid~~~~~~vi~~-------~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~ 384 (411)
| .++|||||+++++|+|+|..++||.. ..+ .+..+|+|++||+||.|. +..+..|.+..+
T Consensus 119 g-~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~-~~~~~~~q~~GRAGR~g~-----------~~~G~~~l~~~~ 185 (201)
T d2p6ra4 119 G-NIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKR-IKVSEYKQMAGRAGRPGM-----------DERGEAIIIVGK 185 (201)
T ss_dssp T-SCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEE-CCHHHHHHHHTTBSCTTT-----------CSCEEEEEECCG
T ss_pred C-CceEEEechHHHhhcCCCCceEEEecceeccCCcCC-CCHHHHHHHhcccCCCCC-----------CCeeEEEEEeCC
Confidence 8 99999999999999999988888752 122 378899999999999994 334556666544
Q ss_pred C
Q 015196 385 D 385 (411)
Q Consensus 385 ~ 385 (411)
.
T Consensus 186 ~ 186 (201)
T d2p6ra4 186 R 186 (201)
T ss_dssp G
T ss_pred C
Confidence 3
No 32
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.70 E-value=1.5e-16 Score=129.51 Aligned_cols=130 Identities=22% Similarity=0.270 Sum_probs=106.3
Q ss_pred HHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh-------CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCcccc
Q 015196 256 CEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL-------RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSI 328 (411)
Q Consensus 256 ~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l-------~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gi 328 (411)
...+.... ..+.++.+.|+.++..+.....+ ++.++||.+++.+++.++++|.++ +++|||||.+++.|+
T Consensus 21 ~~~I~~El--~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g-~~~ILv~TtvIEvGi 97 (211)
T d2eyqa5 21 REAILREI--LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQ-RFNVLVCTTIIETGI 97 (211)
T ss_dssp HHHHHHHH--TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHHHHHHHHHHHHTT-SCCEEEESSTTGGGS
T ss_pred HHHHHHHH--HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHHHHHHHHHHHHcC-CcceEEEehhhhhcc
Confidence 33344433 46889999999998887777776 577899999999999999999998 999999999999999
Q ss_pred CccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHHHHHHHhh
Q 015196 329 DIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLID 401 (411)
Q Consensus 329 d~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~r~~~~~~ 401 (411)
|+|+++++|+.....-..+.+.|..||+||-+. .+++|.+..........+.+|.+.++.
T Consensus 98 DvpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~-------------~s~c~l~~~~~~~~~~~a~~RL~~l~~ 157 (211)
T d2eyqa5 98 DIPTANTIIIERADHFGLAQLHQLRGRVGRSHH-------------QAYAWLLTPHPKAMTTDAQKRLEAIAS 157 (211)
T ss_dssp CCTTEEEEEETTTTSSCHHHHHHHHTTCCBTTB-------------CEEEEEEECCGGGSCHHHHHHHHHHTT
T ss_pred CCCCCcEEEEecchhccccccccccceeeecCc-------------cceEEEEecCCcCCCchHHHHHHHHHh
Confidence 999999999975543478999999999999774 477777766554445557888887774
No 33
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.70 E-value=2.4e-17 Score=138.36 Aligned_cols=148 Identities=18% Similarity=0.139 Sum_probs=105.8
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH-Hhc-----CCceEEEEcChhhHHHHHHHHHHHhCCCCC
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA-CRI-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDD 97 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~-~~~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~ 97 (411)
..|+|.|++++..++.+. ++++.+|||+|||++++.++ .++ +..+++++|+++++.|....+..+......
T Consensus 31 ~~pt~iQ~~aip~il~g~---dvl~~a~TGsGKT~a~~lp~i~~l~~~~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~ 107 (212)
T d1qdea_ 31 EEPSAIQQRAIMPIIEGH---DVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDI 107 (212)
T ss_dssp CSCCHHHHHHHHHHHTTC---CEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEECSSHHHHHHHHHHHHHHTTTSCC
T ss_pred CCCCHHHHHHHHHHHcCC---CEEeecccccchhhhhHhhhHhhhhccCCCcceEEEcccHHHhhhhhhhhccccccccc
Confidence 479999999999999876 99999999999999988875 333 247999999999999999999887544444
Q ss_pred cEEEEcCchh----hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchh----HHHHHHhh
Q 015196 98 QICRFTSDSK----ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM----FRKVISLT 169 (411)
Q Consensus 98 ~v~~~~~~~~----~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~----~~~~~~~~ 169 (411)
.+....+... ....++.+|+|+|++.+....... .+.-.+..++|+||||.+.+.. ...++..+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~IvI~TP~~l~~~~~~~--------~~~l~~l~~lVlDEad~lld~~f~~~v~~I~~~~ 179 (212)
T d1qdea_ 108 KVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRR--------RFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLL 179 (212)
T ss_dssp CEEEECC----------CTTCSEEEECHHHHHHHHHTT--------SSCCTTCCEEEEETHHHHHHTTCHHHHHHHHHHS
T ss_pred ceeeEeeccchhHHHHHhcCCcEEEECCCccccccccC--------ceecCcceEEeehhhhhhcccchHHHHHHHHHhC
Confidence 4444433211 122346799999998775532111 1122467899999999988653 34444444
Q ss_pred c-cccEEEEeeecc
Q 015196 170 K-SHCKLGLTATLV 182 (411)
Q Consensus 170 ~-~~~~i~lSATp~ 182 (411)
+ ..+++++|||..
T Consensus 180 ~~~~Q~vl~SAT~~ 193 (212)
T d1qdea_ 180 PPTTQVVLLSATMP 193 (212)
T ss_dssp CTTCEEEEEESSCC
T ss_pred CCCCeEEEEEeeCC
Confidence 3 357899999985
No 34
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=99.69 E-value=2.3e-16 Score=141.64 Aligned_cols=134 Identities=19% Similarity=0.300 Sum_probs=111.2
Q ss_pred CCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh---C--CceeeCCCCHHHHHHHHHHhcCCC-Cee-EEEeec
Q 015196 250 PNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL---R--KPMIYGATSHVERTKILQAFKCSR-DLN-TIFLSK 322 (411)
Q Consensus 250 ~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l---~--~~~i~g~~~~~~r~~~~~~f~~~~-~~~-vlv~t~ 322 (411)
+.|+..+..++.......++|+|||+++...++.+...| + ...++|.++..+|..+++.|++++ ... +|+++.
T Consensus 100 S~Kl~~L~~ll~~~~~~~g~KvlIFs~~~~~ld~l~~~l~~~g~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~ 179 (346)
T d1z3ix1 100 SGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSK 179 (346)
T ss_dssp SHHHHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHHHHHHTCCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGG
T ss_pred CHHHHHHHHHHHHHHHhcCCceeEEeehhhhhHHHHHHHhhhhccccccccchhHHHHHHHHHhhhcccccceeeeecch
Confidence 346677777776554356889999999999988888777 3 345789999999999999999862 223 566789
Q ss_pred cCccccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHHH
Q 015196 323 VGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKR 395 (411)
Q Consensus 323 ~~~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~r 395 (411)
++++|+|++.++.||+++++ +|+....|++||+.|.|++ ..+.+|.+++.+|.|+.+.++.
T Consensus 180 agg~GlnL~~a~~vi~~d~~-wnp~~~~Qa~~R~~R~GQ~-----------~~V~v~rli~~~TiEe~i~~~~ 240 (346)
T d1z3ix1 180 AGGCGLNLIGANRLVMFDPD-WNPANDEQAMARVWRDGQK-----------KTCYIYRLLSTGTIEEKILQRQ 240 (346)
T ss_dssp GSCTTCCCTTEEEEEECSCC-SSHHHHHHHHTTSSSTTCC-----------SCEEEEEEEETTSHHHHHHHHH
T ss_pred hhhhccccccceEEEEecCC-CccchHhHhhhcccccCCC-----------CceEEEEEEeCCCHHHHHHHHH
Confidence 99999999999999998666 4999999999999999954 4599999999999999887554
No 35
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=99.68 E-value=1.1e-16 Score=137.78 Aligned_cols=131 Identities=24% Similarity=0.280 Sum_probs=96.3
Q ss_pred CcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh----C--CceeeCCCCHHHHHHHHHHhcCCCCeeEEEe-ecc
Q 015196 251 NKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL----R--KPMIYGATSHVERTKILQAFKCSRDLNTIFL-SKV 323 (411)
Q Consensus 251 ~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l----~--~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~-t~~ 323 (411)
.|+..+..++.... ..+.++||||++....+.+...+ + +..++|+++..+|..+++.|++++..+++++ +.+
T Consensus 69 ~K~~~l~~~l~~~~-~~g~kviIFs~~~~~~~~l~~~l~~~~~~~~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~~ 147 (244)
T d1z5za1 69 GKMIRTMEIIEEAL-DEGDKIAIFTQFVDMGKIIRNIIEKELNTEVPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKA 147 (244)
T ss_dssp HHHHHHHHHHHHHH-HTTCCEEEEESCHHHHHHHHHHHHHHHCSCCCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECCT
T ss_pred hHHHHHHHHHHhhc-ccccceEEEeeceehHHHHHHHHHhhccceEEEEecccchhccchhhhhhhccccchhccccccc
Confidence 36677777775544 46889999999999888776555 2 4568999999999999999988756777766 689
Q ss_pred CccccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHH
Q 015196 324 GDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTK 394 (411)
Q Consensus 324 ~~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 394 (411)
+++|+|++.++.+|+++++ +|+..+.|++||++|.|+ ...+.+|.+++.+|.|+.+.+.
T Consensus 148 ~g~Glnl~~a~~vi~~~~~-wn~~~~~Qa~~R~~R~Gq-----------~~~v~i~~l~~~~Tiee~i~~~ 206 (244)
T d1z5za1 148 GGFGINLTSANRVIHFDRW-WNPAVEDQATDRVYRIGQ-----------TRNVIVHKLISVGTLEEKIDQL 206 (244)
T ss_dssp TCCCCCCTTCSEEEECSCC-SCTTTC-------------------------CCEEEEEEETTSHHHHHHHH
T ss_pred cccccccchhhhhhhcCch-hhhHHHhhhcceeeecCC-----------CCceEEEEEeeCCCHHHHHHHH
Confidence 9999999999999998655 599999999999999994 4569999999999999877743
No 36
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.63 E-value=7.7e-16 Score=128.82 Aligned_cols=148 Identities=18% Similarity=0.176 Sum_probs=109.5
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH-hc-----CCceEEEEcChhhHHHHHHHHHHHhCCCCC
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC-RI-----KKSCLCLATNAVSVDQWAFQFKLWSTIQDD 97 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~-~~-----~~~~lil~P~~~l~~q~~~~~~~~~~~~~~ 97 (411)
..|+|.|++++..++.+. +.++.||||+|||++++.++. +. ..+.++++|+..++.+....+..+......
T Consensus 22 ~~pt~iQ~~aip~il~g~---dvi~~a~tGsGKTlay~lp~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (206)
T d1s2ma1 22 EKPSPIQEEAIPVAITGR---DILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGI 98 (206)
T ss_dssp CSCCHHHHHHHHHHHHTC---CEEEECCTTSCHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHHHHHHHHTTTTTC
T ss_pred CCCCHHHHHHHHHHHcCC---CEEEecCCcchhhhhhccccccccccccccccceeeccchhhhhhhhhhhhhcccccCe
Confidence 379999999999999886 899999999999999877653 22 347899999999999988888777666566
Q ss_pred cEEEEcCchh-----hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHH----HHHh
Q 015196 98 QICRFTSDSK-----ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRK----VISL 168 (411)
Q Consensus 98 ~v~~~~~~~~-----~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~----~~~~ 168 (411)
.+....+... .......+|+|+|+..+....+. ..+.-.+..++|+||||.+.+..+.. ++..
T Consensus 99 ~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~--------~~~~l~~l~~lV~DEaD~l~~~~f~~~v~~I~~~ 170 (206)
T d1s2ma1 99 SCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASR--------KVADLSDCSLFIMDEADKMLSRDFKTIIEQILSF 170 (206)
T ss_dssp CEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHT--------TCSCCTTCCEEEEESHHHHSSHHHHHHHHHHHTT
T ss_pred eEEeecCccchhhHHHHhcccceEEEECCccccccccc--------ceeecccceEEEeechhhhhhhhhHHHHHHHHHh
Confidence 6777766432 23346789999999977543211 11112456789999999999875544 3444
Q ss_pred hc-cccEEEEeeecc
Q 015196 169 TK-SHCKLGLTATLV 182 (411)
Q Consensus 169 ~~-~~~~i~lSATp~ 182 (411)
++ ..+++++|||..
T Consensus 171 l~~~~Q~il~SATl~ 185 (206)
T d1s2ma1 171 LPPTHQSLLFSATFP 185 (206)
T ss_dssp SCSSCEEEEEESCCC
T ss_pred CCCCCEEEEEEEeCC
Confidence 43 347899999975
No 37
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.59 E-value=3.7e-16 Score=128.53 Aligned_cols=130 Identities=19% Similarity=0.232 Sum_probs=94.0
Q ss_pred HHHHHHHHhhhcCCCeEEEEecChhHHHHH--------HHHh--------CCceeeCCCCHHHHHHHHHHhcCCCCeeEE
Q 015196 255 ACEFLIRFHEQQRGDKIIVFADNLFALTEY--------AMKL--------RKPMIYGATSHVERTKILQAFKCSRDLNTI 318 (411)
Q Consensus 255 ~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l--------~~~l--------~~~~i~g~~~~~~r~~~~~~f~~~~~~~vl 318 (411)
+...+.+.. .++.++.+.|+.++..+.+ .+.+ .+.++||++++.+|+.++++|++| +++||
T Consensus 18 v~~~I~~el--~~g~QvyvVcP~Ieese~~~~~~~~e~~~~l~~~~~p~~~v~~lHG~m~~~eke~~m~~F~~g-~~~iL 94 (206)
T d1gm5a4 18 VYEFVRQEV--MRGGQAFIVYPLIEESDKLNVKSAVEMYEYLSKEVFPEFKLGLMHGRLSQEEKDRVMLEFAEG-RYDIL 94 (206)
T ss_dssp HHHHHHHHT--TTSCCBCCBCCCC--------CHHHHHHHSGGGSCC---CBCCCCSSSCCSCSHHHHHHHTTT-SSSBC
T ss_pred HHHHHHHHH--HcCCCEEEEEeeecccccccchhhHHHHHHHHHhcCCCCeEEEEeecccHHHHHHHHHHHHCC-CEEEE
Confidence 334444433 3577888888877553332 2222 466899999999999999999998 99999
Q ss_pred EeeccCccccCccCccEEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHHHHHH
Q 015196 319 FLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQF 398 (411)
Q Consensus 319 v~t~~~~~Gid~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~r~~~ 398 (411)
|||.+++.|+|+|+++++|+...+.-+.+.+.|+.||+||.+. .++.|.+.++.+ ..+..|.+.
T Consensus 95 VaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~-------------~~~~~l~~~~~~---~~~~~rl~~ 158 (206)
T d1gm5a4 95 VSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQ-------------EAYCFLVVGDVG---EEAMERLRF 158 (206)
T ss_dssp CCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSST-------------TCEEECCCCSCC---HHHHHHHHH
T ss_pred EEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccc-------------cceeEeeecccc---ccchhhhhh
Confidence 9999999999999999988876664478999999999999885 355566655432 234556666
Q ss_pred HhhcC
Q 015196 399 LIDQG 403 (411)
Q Consensus 399 ~~~~g 403 (411)
+...+
T Consensus 159 ~~~~~ 163 (206)
T d1gm5a4 159 FTLNT 163 (206)
T ss_dssp HHTCC
T ss_pred ccccC
Confidence 66443
No 38
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.59 E-value=1.2e-15 Score=117.63 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=72.3
Q ss_pred CCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEec--
Q 015196 268 GDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQIS-- 340 (411)
Q Consensus 268 ~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~~-- 340 (411)
+.++||||++++.++.+++.| .+..+|++++. +.|+++ ..++||||+++++|+| |+++.||.+.
T Consensus 35 ~~k~IVFc~t~~~ae~la~~L~~~G~~~~~~H~~~~~-------~~~~~~-~~~vlvaTd~~~~GiD-~~v~~Vi~~~~~ 105 (138)
T d1jr6a_ 35 GGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDV-------SVIPTN-GDVVVVATDALMTGFT-GDFDSVIDCNTS 105 (138)
T ss_dssp TSCEEEECSCHHHHHHHHHHHHHHTCEEEEECTTCCS-------CCCTTS-SCEEEEESSSSCSSSC-CCBSEEEECSEE
T ss_pred CCCEEEEeCcHHHHHHHHHHHhccccchhhhhccchh-------hhhhhh-hcceeehhHHHHhccc-cccceEEEEEec
Confidence 678999999999999999998 35678998884 457887 9999999999999999 8999998742
Q ss_pred -CCCCCHHHHHHHhhcccccCC
Q 015196 341 -SHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 341 -~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
.++.+...|+|++||+|| |.
T Consensus 106 ~~~P~~~~~y~qr~GR~gR-g~ 126 (138)
T d1jr6a_ 106 DGKPQDAVSRTQRRGRTGR-GK 126 (138)
T ss_dssp TTEECCHHHHHHHHTTBCS-SS
T ss_pred CCCCCCHHHHHhHhccccC-CC
Confidence 234699999999999999 74
No 39
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.56 E-value=1.2e-15 Score=128.17 Aligned_cols=147 Identities=13% Similarity=0.062 Sum_probs=102.1
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc------CCceEEEEcChhhHHHHHHHHHHHhCCCC--
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI------KKSCLCLATNAVSVDQWAFQFKLWSTIQD-- 96 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~------~~~~lil~P~~~l~~q~~~~~~~~~~~~~-- 96 (411)
.|+|.|++++..++.+. ++++.||||||||++++.++.+. ....++++|...+..+....+........
T Consensus 23 ~pt~iQ~~aip~~l~G~---dvii~a~TGSGKTlayllp~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (209)
T d1q0ua_ 23 KPTEIQERIIPGALRGE---SMVGQSQTGTGKTHAYLLPIMEKIKPERAEVQAVITAPTRELATQIYHETLKITKFCPKD 99 (209)
T ss_dssp SCCHHHHHHHHHHHHTC---CEEEECCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHHHHHHHHHHTTSCGG
T ss_pred CCCHHHHHHHHHHHCCC---CeEeecccccccceeeeeeeccccccccccccccccccccchhHHHHHHHHhhhcccccc
Confidence 69999999999999886 99999999999999988776432 24789999999988887776665433221
Q ss_pred --CcEEEEcCchh-----hhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchh----HHHH
Q 015196 97 --DQICRFTSDSK-----ERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHM----FRKV 165 (411)
Q Consensus 97 --~~v~~~~~~~~-----~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~----~~~~ 165 (411)
..+....+... .......+|+|+|++.+.....+. .....+..++|+||||.+.+.. +..+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~--------~~~~~~l~~lViDEad~ll~~~f~~~v~~I 171 (209)
T d1q0ua_ 100 RMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQ--------ALDVHTAHILVVDEADLMLDMGFITDVDQI 171 (209)
T ss_dssp GCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTT--------CCCGGGCCEEEECSHHHHHHTTCHHHHHHH
T ss_pred ccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhh--------ccccccceEEEEeecccccccccHHHHHHH
Confidence 22333333221 123355799999999775432111 1112466799999999998764 3444
Q ss_pred HHhh-ccccEEEEeeecc
Q 015196 166 ISLT-KSHCKLGLTATLV 182 (411)
Q Consensus 166 ~~~~-~~~~~i~lSATp~ 182 (411)
+..+ +..+++++|||..
T Consensus 172 ~~~~~~~~Q~il~SATl~ 189 (209)
T d1q0ua_ 172 AARMPKDLQMLVFSATIP 189 (209)
T ss_dssp HHTSCTTCEEEEEESCCC
T ss_pred HHHCCCCCEEEEEEccCC
Confidence 4444 3458899999984
No 40
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.40 E-value=1.3e-14 Score=124.90 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=83.3
Q ss_pred CCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHhCCceeeCCCCHHHHHHHHHHhcCCCCeeEEEee----ccCc
Q 015196 250 PNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCSRDLNTIFLS----KVGD 325 (411)
Q Consensus 250 ~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t----~~~~ 325 (411)
..|+..+..+++.. +.++||||++.+.++.+++.|... +||+++..+|..+++.|++| +++||||| +.++
T Consensus 11 ~~~~~~l~~~l~~~----~~~~iif~~~~~~~~~l~~~l~~~-~hg~~~~~~R~~~~~~f~~g-~~~vLVaT~a~~~v~~ 84 (248)
T d1gkub2 11 DESISTLSSILEKL----GTGGIIYARTGEEAEEIYESLKNK-FRIGIVTATKKGDYEKFVEG-EIDHLIGTAHYYGTLV 84 (248)
T ss_dssp CCCTTTTHHHHTTS----CSCEEEEESSHHHHHHHHHTTTTS-SCEEECTTSSSHHHHHHHHT-SCSEEEEECC------
T ss_pred chHHHHHHHHHHHh----CCCEEEEECCHHHHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHhC-CCeEEEEeccccchhh
Confidence 44556666666533 567999999999999999999754 79999999999999999998 99999999 6689
Q ss_pred cccCccC-ccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 326 NSIDIPE-ANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 326 ~Gid~~~-~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
+|+|+|+ ++.||+++.|+ |.|++||++|.|.
T Consensus 85 rGlDip~~v~~VI~~d~P~-----~~~r~gR~~R~g~ 116 (248)
T d1gkub2 85 RGLDLPERIRFAVFVGCPS-----FRVTIEDIDSLSP 116 (248)
T ss_dssp CCSCCTTTCCEEEEESCCE-----EEEECSCGGGSCH
T ss_pred hccCccccccEEEEeCCCc-----chhhhhhhhccCc
Confidence 9999996 99999997662 7799999999985
No 41
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.32 E-value=5e-13 Score=113.50 Aligned_cols=91 Identities=18% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHH----------HHHHHHhcCCCCeeEEEeeccCcc---ccC
Q 015196 268 GDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVER----------TKILQAFKCSRDLNTIFLSKVGDN---SID 329 (411)
Q Consensus 268 ~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r----------~~~~~~f~~~~~~~vlv~t~~~~~---Gid 329 (411)
++++||||++++.+++++..| ++..+|++++...| ...++.|.++ +.+++|+|+.+.+ |+|
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~Gi~a~~~Hgglsq~~R~~~gd~~i~~~~aLe~f~~G-~~dvVVaT~~~a~g~~giD 114 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVALGINAVAYYRGLDVSVIPTSGDVVVVATDALMTGFTG-DFDSVIDCNTCVTQTVDFS 114 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTSCGGGSCSSSSEEEEECTTC---CCC-CBSEEEECCEEEEEEEECC
T ss_pred CCCEEEECCcHHHHHHHHHHHHHCCCCEEEEeCCchHHHHHhccchHHHHHHHHHHHhcC-CCcEEEEEeehhccCCCCC
Confidence 779999999999999999999 34567888887765 4567889997 9999999999888 567
Q ss_pred ccCccEEEEecCCCCCHHHHHHHhhcccccCC
Q 015196 330 IPEANVIIQISSHAGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 330 ~~~~~~vi~~~~~~~s~~~~~Q~~GR~~R~~~ 361 (411)
++.+.+|+.+..| .|...|+||+||+|| +.
T Consensus 115 id~V~~VI~~d~P-~SvesyIQRiGRTGR-Gr 144 (299)
T d1a1va2 115 LDPTFTIETTTLP-QDAVSRTQRRGRTGR-GK 144 (299)
T ss_dssp CSSSCEEEEEEEE-CBHHHHHHHHTTBCS-SS
T ss_pred CCcceEEEeCCCC-CCHHHHHhhccccCC-CC
Confidence 7777788887555 599999999999999 63
No 42
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=99.01 E-value=2e-09 Score=84.10 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=85.5
Q ss_pred HHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHhC---C--ceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccC
Q 015196 255 ACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLR---K--PMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSID 329 (411)
Q Consensus 255 ~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l~---~--~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid 329 (411)
++..+.+.+. .+.++||++.+++..+.+++.|. + .+++......+.+-+-+.-. .-.|.|+|+++++|.|
T Consensus 23 Ii~eV~~~~~--~grPVLIgT~SIe~SE~ls~~L~~~gi~h~vLnAk~~~~Ea~II~~Ag~---~g~VtIATNmAGRGtD 97 (175)
T d1tf5a4 23 VAEDVAQRYM--TGQPVLVGTVAVETSELISKLLKNKGIPHQVLNAKNHEREAQIIEEAGQ---KGAVTIATNMAGRGTD 97 (175)
T ss_dssp HHHHHHHHHH--HTCCEEEEESCHHHHHHHHHHHHTTTCCCEEECSSCHHHHHHHHTTTTS---TTCEEEEETTSSTTCC
T ss_pred HHHHHHHHHh--cCCCEEEEeCcHHHHHHHHHHHHHcCCCceeehhhhHHHHHHHHHhccC---CCceeehhhHHHcCCC
Confidence 3444444443 58899999999999999999993 2 24565544333332222222 4489999999999999
Q ss_pred ccC---c---c--EEEEecCCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHHHHHHHhh
Q 015196 330 IPE---A---N--VIIQISSHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLID 401 (411)
Q Consensus 330 ~~~---~---~--~vi~~~~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~r~~~~~~ 401 (411)
++- + . +||.. ....|.....|..||++|.|+ +|...+|+.+ ..+.+...-+.+-.+.+..
T Consensus 98 ikl~~~v~~~GGLhVI~t-~~~~s~Rid~Ql~GR~gRQGd----------pGs~~~~~sl-eD~l~~~f~~~~~~~~~~~ 165 (175)
T d1tf5a4 98 IKLGEGVKELGGLAVVGT-ERHESRRIDNQLRGRSGRQGD----------PGITQFYLSM-EDELMRRFGAERTMAMLDR 165 (175)
T ss_dssp CCCCTTSGGGTSEEEEES-SCCSSHHHHHHHHTTSSGGGC----------CEEEEEEEET-TSSGGGSSHHHHHHHHHHH
T ss_pred ccchHHHHhCCCcEEEEe-ccCcchhHHHHHhcchhhhCC----------CcccEEEEEc-CHHHHHHHhHHHHHHHHHH
Confidence 852 1 1 35554 334689999999999999996 4555554444 3333333344556666655
Q ss_pred cC
Q 015196 402 QG 403 (411)
Q Consensus 402 ~g 403 (411)
.|
T Consensus 166 ~~ 167 (175)
T d1tf5a4 166 FG 167 (175)
T ss_dssp HT
T ss_pred hC
Confidence 44
No 43
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=98.84 E-value=4.6e-09 Score=90.77 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=65.9
Q ss_pred CCeEEEEecChhHHHHHHHHh-----CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEe---
Q 015196 268 GDKIIVFADNLFALTEYAMKL-----RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQI--- 339 (411)
Q Consensus 268 ~~~~ivf~~~~~~~~~l~~~l-----~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~--- 339 (411)
+.+++|||+++..++.+++.| ++..+||.+...++. .|+++ +.++||||+++++|+|++ +..||-.
T Consensus 36 ~g~~~~F~~s~~~~~~~a~~L~~~g~~V~~l~~~~~~~e~~----~~~~~-~~~~~~~t~~~~~~~~~~-~~~vid~g~~ 109 (299)
T d1yksa2 36 KRPTAWFLPSIRAANVMAASLRKAGKSVVVLNRKTFEREYP----TIKQK-KPDFILATDIAEMGANLC-VERVLDCRTA 109 (299)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCEEECCSSSCC------------C-CCSEEEESSSTTCCTTCC-CSEEEECCEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCcCcHhHHh----hhhcC-CcCEEEEechhhhceecC-ceEEEecCce
Confidence 568999999999999999999 356789998877744 57787 899999999999999994 8877632
Q ss_pred ------cCC---------CCCHHHHHHHhhcccccCC
Q 015196 340 ------SSH---------AGSRRQEAQRLGRILRAKG 361 (411)
Q Consensus 340 ------~~~---------~~s~~~~~Q~~GR~~R~~~ 361 (411)
++. +-|.++..||.||+||.+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~gr~~~ 146 (299)
T d1yksa2 110 FKPVLVDEGRKVAIKGPLRISASSAAQRRGRIGRNPN 146 (299)
T ss_dssp EEEEEETTTTEEEEEEEEECCHHHHHHHHTTSSCCTT
T ss_pred eceeeecCCCCeeEEeeeecCHHHHHHhcccccccCC
Confidence 110 1267888999999999864
No 44
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=98.45 E-value=5.2e-07 Score=74.89 Aligned_cols=150 Identities=15% Similarity=0.143 Sum_probs=95.0
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH---HhcCCceEEEEcChhhHH---HHHHHHHHHhCCCCCc
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA---CRIKKSCLCLATNAVSVD---QWAFQFKLWSTIQDDQ 98 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~P~~~l~~---q~~~~~~~~~~~~~~~ 98 (411)
.+|||..+.+-.+.-+. .-+..+.||=|||+++..++ +..++.|=+++.+--|+. +|+..+-+++|+ .
T Consensus 78 G~RhyDVQLiGgi~L~~---G~iaem~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDae~m~~iy~~lGl---s 151 (273)
T d1tf5a3 78 GMFPFKVQLMGGVALHD---GNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTVNEYLASRDAEQMGKIFEFLGL---T 151 (273)
T ss_dssp SCCCCHHHHHHHHHHHT---TSEEECCTTSCHHHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHHHHHHHHTTC---C
T ss_pred ceEEehhHHHHHHHHHh---hhheeecCCCcchhHHHHHHHHHHhcCCCceEEecCccccchhhhHHhHHHHHcCC---C
Confidence 45566555565554433 45889999999999987765 234678999999888875 588888888887 4
Q ss_pred EEEEcCchhhhhc---CCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch---------------
Q 015196 99 ICRFTSDSKERFR---GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH--------------- 160 (411)
Q Consensus 99 v~~~~~~~~~~~~---~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~--------------- 160 (411)
++...+....... =.++|+.+|...|....-|.+-. ...+..-...+.+.|+||++.+.-.
T Consensus 152 vg~~~~~~~~~~r~~~Y~~di~Ygt~~e~~fDyLrd~~~-~~~~~~~~r~~~~aIvDEvDsiliDeartpliisg~~~~~ 230 (273)
T d1tf5a3 152 VGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMV-LYKEQMVQRPLHFAVIDEVDSILIDEARTPLIISGQSMTL 230 (273)
T ss_dssp EEECCTTSCHHHHHHHHHSSEEEEEHHHHHHHHHHHTTC-SSGGGCCCCCCCEEEEETHHHHHTTTTTCEEEEEEEEEEE
T ss_pred ccccccccCHHHHHHHhhCCceecchhhhhhhhcchhhh-cChhhhccCCCCEEEEEcchhhhhhccCCceEeccCccch
Confidence 6666554322111 13789999988764321000000 0000111246789999999986521
Q ss_pred ---hHHHHHHhhccccEEEEeeeccc
Q 015196 161 ---MFRKVISLTKSHCKLGLTATLVR 183 (411)
Q Consensus 161 ---~~~~~~~~~~~~~~i~lSATp~~ 183 (411)
.+++++... .++-+||+|-..
T Consensus 231 a~it~q~~f~~y--~~l~gmtgta~~ 254 (273)
T d1tf5a3 231 ATITFQNYFRMY--EKLAGMTGTAKT 254 (273)
T ss_dssp EEEEHHHHHTTS--SEEEEEESCCGG
T ss_pred hhhhHHHHHHHH--HHHhCCccccHH
Confidence 466665543 478899999753
No 45
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=98.43 E-value=3.3e-07 Score=81.66 Aligned_cols=144 Identities=10% Similarity=0.035 Sum_probs=83.7
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH---h----cCCceEEEEcChhhHHHHHHHHHHHhC-CC
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC---R----IKKSCLCLATNAVSVDQWAFQFKLWST-IQ 95 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~---~----~~~~~lil~P~~~l~~q~~~~~~~~~~-~~ 95 (411)
..+.+.|+.|+...+.++ -++|.+|+|+|||.+....+. + .+.++++.+|+...+....+.+..... +.
T Consensus 147 ~~~~~~Q~~A~~~al~~~---~~vI~G~pGTGKTt~i~~~l~~l~~~~~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~~ 223 (359)
T d1w36d1 147 SDEINWQKVAAAVALTRR---ISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP 223 (359)
T ss_dssp TTSCCHHHHHHHHHHTBS---EEEEECCTTSTHHHHHHHHHHHHHHTCSSCCCCEEEEBSSHHHHHHHHHHHTHHHHHSS
T ss_pred cccccHHHHHHHHHHcCC---eEEEEcCCCCCceehHHHHHHHHHHHHhccCCeEEEecCcHHHHHHHHHHHHHHHhhcC
Confidence 346789999999988765 889999999999998654432 2 235899999999888777666543221 11
Q ss_pred CCcEEEEcCchhhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCchhHHHHHHhhccccEE
Q 015196 96 DDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKL 175 (411)
Q Consensus 96 ~~~v~~~~~~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~~~~~~i 175 (411)
.. ..... ....-..|...+......... ..........++++|+||+-.+..+.+..++..+.....+
T Consensus 224 ~~-----~~~~~-----~~~~~~~t~~~ll~~~~~~~~--~~~~~~~~l~~d~lIIDEaSmv~~~l~~~ll~~~~~~~~l 291 (359)
T d1w36d1 224 LT-----DEQKK-----RIPEDASTLHRLLGAQPGSQR--LRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPDHARV 291 (359)
T ss_dssp CC-----SCCCC-----SCSCCCBTTTSCC-------------CTTSCCSCSEEEECSGGGCBHHHHHHHHHTCCTTCEE
T ss_pred ch-----hhhhh-----hhhhhhhHHHHHHhhhhcchH--HHHhhhcccccceeeehhhhccCHHHHHHHHHHhcCCCEE
Confidence 00 00000 000001122222111000000 0000111346789999999999888777788777666566
Q ss_pred EEeeecc
Q 015196 176 GLTATLV 182 (411)
Q Consensus 176 ~lSATp~ 182 (411)
.|.|=|.
T Consensus 292 ILvGD~~ 298 (359)
T d1w36d1 292 IFLGDRD 298 (359)
T ss_dssp EEEECTT
T ss_pred EEECChh
Confidence 6666554
No 46
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.43 E-value=2.2e-06 Score=67.89 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=71.8
Q ss_pred HHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHhC---C--ceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCcccc
Q 015196 254 RACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKLR---K--PMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSI 328 (411)
Q Consensus 254 ~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l~---~--~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gi 328 (411)
.++.++.+.+. .+.++||-+.+++..+.+++.|. + .+++......+-+-+-+.=+ .-.|-|+|+|+++|.
T Consensus 22 Avv~ei~~~h~--~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herEAeIIAqAG~---~GaVTIATNMAGRGT 96 (219)
T d1nkta4 22 AVVDDVAERYA--KGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAVAGR---RGGVTVATNMAGRGT 96 (219)
T ss_dssp HHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHHTTTS---TTCEEEEETTCSTTC
T ss_pred HHHHHHHHHHh--cCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHHHHHHHhccc---CCcEEeeccccCCCC
Confidence 35566666664 68899999999999999999983 2 35666544333333333333 348999999999999
Q ss_pred CccC-----------------------------------------------c---c--EEEEecCCCCCHHHHHHHhhcc
Q 015196 329 DIPE-----------------------------------------------A---N--VIIQISSHAGSRRQEAQRLGRI 356 (411)
Q Consensus 329 d~~~-----------------------------------------------~---~--~vi~~~~~~~s~~~~~Q~~GR~ 356 (411)
|+.= + . +||-..+. .|..---|..||+
T Consensus 97 DI~LGgn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIGTErH-eSrRIDnQLRGRs 175 (219)
T d1nkta4 97 DIVLGGNVDFLTDQRLRERGLDPVETPEEYEAAWHSELPIVKEEASKEAKEVIEAGGLYVLGTERH-ESRRIDNQLRGRS 175 (219)
T ss_dssp CCCTTCCHHHHHHHHHHHTTCCTTTSHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTSEEEEECSCC-SSHHHHHHHHHTS
T ss_pred ceeecCchhhhhHHHhhhcccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecccc-ccccccccccccc
Confidence 9931 0 1 34443344 5888889999999
Q ss_pred cccCC
Q 015196 357 LRAKG 361 (411)
Q Consensus 357 ~R~~~ 361 (411)
||.|.
T Consensus 176 GRQGD 180 (219)
T d1nkta4 176 GRQGD 180 (219)
T ss_dssp SGGGC
T ss_pred cccCC
Confidence 99996
No 47
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.28 E-value=1.9e-06 Score=71.78 Aligned_cols=149 Identities=17% Similarity=0.220 Sum_probs=92.4
Q ss_pred CChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH---HhcCCceEEEEcChhhHH---HHHHHHHHHhCCCCCcE
Q 015196 26 PRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA---CRIKKSCLCLATNAVSVD---QWAFQFKLWSTIQDDQI 99 (411)
Q Consensus 26 l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~P~~~l~~---q~~~~~~~~~~~~~~~v 99 (411)
+|+|=.+.+-.+.-+. .-+..+.||=|||+++.+++ +-.++.|-+++.+-.|+. +|+..+-+++|+ .+
T Consensus 96 mRhyDVQLiGgi~l~~---g~iaem~TGEGKTL~a~l~a~l~al~g~~vhvvTvNdyLA~RDa~~m~~~y~~lGl---sv 169 (288)
T d1nkta3 96 QRPFDVQVMGAAALHL---GNVAEMKTGEGKTLTCVLPAYLNALAGNGVHIVTVNDYLAKRDSEWMGRVHRFLGL---QV 169 (288)
T ss_dssp CCCCHHHHHHHHHHHT---TEEEECCTTSCHHHHTHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHTTC---CE
T ss_pred ceeeeehhHHHHHHhh---hhhhcccCCCchhHHHHHHHHHHHhcCCCeEEEecCchhhhhhHHHHHHHHHHhCC---Cc
Confidence 4444444444443333 56889999999999977764 334678999999988875 588888888887 57
Q ss_pred EEEcCchhhhhc---CCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCch----------------
Q 015196 100 CRFTSDSKERFR---GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAH---------------- 160 (411)
Q Consensus 100 ~~~~~~~~~~~~---~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~~---------------- 160 (411)
+...+....... =.++|+.+|...|....-|.+-.. ..+..-...+.+.|+||++.+.-.
T Consensus 170 g~~~~~~~~~~~~~~Y~~di~Y~t~~e~gfDyLrd~~~~-~~~~~~~r~~~~aIvDEvDsiLiDeartpLiis~~~~a~i 248 (288)
T d1nkta3 170 GVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAH-SLDDLVQRGHHYAIVDEVDSILIDEARTPLIISNQTLATI 248 (288)
T ss_dssp EECCTTCCHHHHHHHHHSSEEEEEHHHHHHHHHHHTTCS-SGGGCCCCCCCEEEETTHHHHHTTGGGSCEEEEEEEEEEE
T ss_pred CcccccCChHHHHHHhhcccccccHHHHhhhhhhhhhcc-ChhhhcccCCcEEEEEcccccccccccCceEeccCCcchh
Confidence 776654332111 137899999886643210000000 000111246789999999987521
Q ss_pred hHHHHHHhhccccEEEEeeeccc
Q 015196 161 MFRKVISLTKSHCKLGLTATLVR 183 (411)
Q Consensus 161 ~~~~~~~~~~~~~~i~lSATp~~ 183 (411)
.+++.+.. ..++-+||+|-..
T Consensus 249 t~qn~fr~--y~kl~gmtgta~t 269 (288)
T d1nkta3 249 TLQNYFRL--YDKLAGMTGTAQT 269 (288)
T ss_dssp CHHHHHTT--SSEEEEEESCCGG
T ss_pred hHHHHHHH--HHHHhCCcccHHH
Confidence 45555543 3467888888753
No 48
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=98.10 E-value=3.7e-06 Score=75.66 Aligned_cols=77 Identities=17% Similarity=0.262 Sum_probs=66.8
Q ss_pred CcccCCCCCCChhHHHHHHHHHhC--CCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhC
Q 015196 17 NMELKPHAQPRPYQEKSLSKMFGN--GRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWST 93 (411)
Q Consensus 17 ~~~~~~~~~l~~~Q~~ai~~~~~~--~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~ 93 (411)
.+.+.++|.|.--|=+||+.+..+ ...+..+|.+.||||||++++.++.+.++++|||+|+..++.|+.+++..|++
T Consensus 3 ~f~~~~~~~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA~l~~~~~rp~LVVt~n~~~A~qL~~dL~~~l~ 81 (413)
T d1t5la1 3 RFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIAHNKTLAGQLYSELKEFFP 81 (413)
T ss_dssp CCCCCCSSCCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEECSSHHHHHHHHHHHHHHCT
T ss_pred ceEEecCCCCCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHHcC
Confidence 456778899999999999988643 12346788999999999999999999999999999999999999999999864
No 49
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.90 E-value=6.2e-05 Score=61.23 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=34.1
Q ss_pred CCCChhHHHHHHHHH---hCC-CCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 24 AQPRPYQEKSLSKMF---GNG-RARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~---~~~-~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
+.++|||.++++.+. ..+ .++..++.+|+|+|||.+|..++..+
T Consensus 1 ~~~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~~~a~~l 48 (207)
T d1a5ta2 1 MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYL 48 (207)
T ss_dssp CCCCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHHHHHHhc
Confidence 357899999888774 233 34457889999999999998888765
No 50
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=97.90 E-value=1.1e-05 Score=70.36 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=50.4
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc----C---CceEEEEcChhhHHHHHHHHHHHhC
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI----K---KSCLCLATNAVSVDQWAFQFKLWST 93 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~----~---~~~lil~P~~~l~~q~~~~~~~~~~ 93 (411)
+|.|-|++++.. ..++++|.|++|||||.+++..+..+ + .+++++++++++++.....+.+..+
T Consensus 1 ~L~~eQ~~av~~-----~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~~~~~~ILvlt~tn~a~~~i~~~~~~~~~ 71 (306)
T d1uaaa1 1 RLNPGQQQAVEF-----VTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLG 71 (306)
T ss_dssp CCCHHHHHHHHC-----CSSEEEECCCTTSCHHHHHHHHHHHHHHHHCCCGGGEEEEESSHHHHHHHHHHHHHHSC
T ss_pred CcCHHHHHHHhC-----CCCCEEEEeeCCccHHHHHHHHHHHHHHhcCCChhHEEEEeCcHHHHHHHHHHHHHhcC
Confidence 478999999964 22478999999999999876644322 2 4899999999999998888877643
No 51
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.57 E-value=7.9e-05 Score=65.03 Aligned_cols=63 Identities=13% Similarity=0.105 Sum_probs=50.1
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc---C----CceEEEEcChhhHHHHHHHHHHHh
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI---K----KSCLCLATNAVSVDQWAFQFKLWS 92 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~---~----~~~lil~P~~~l~~q~~~~~~~~~ 92 (411)
.|.+-|+++++.. ..+.+|.|++|||||.+++.-+.++ + .+++++++++.++......+....
T Consensus 11 ~L~~eQ~~~v~~~-----~g~~lV~g~aGSGKTt~l~~ri~~ll~~~~~~p~~il~lt~t~~aa~~~~~~~~~~~ 80 (318)
T d1pjra1 11 HLNKEQQEAVRTT-----EGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLL 80 (318)
T ss_dssp TSCHHHHHHHHCC-----SSCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHhCC-----CCCEEEEecCCccHHHHHHHHHHHHHHcCCCCHHHeEeEeccHHHHHHHHHHHHhhc
Confidence 3789999999742 2478999999999999987654322 1 489999999999999888887764
No 52
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=97.56 E-value=0.00025 Score=56.93 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=37.4
Q ss_pred HHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcC------CceEEEEcC
Q 015196 30 QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIK------KSCLCLATN 77 (411)
Q Consensus 30 Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~------~~~lil~P~ 77 (411)
|.+.++.++..+...+.++.+|.|+|||..|...+.... .-++++.|.
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~l~~~i~~~~~~h~D~~~i~~~ 55 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPE 55 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHHHHHHHHTSCCCTTTEEEECCS
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHHHHHHHhccccCCCCEEEEeCC
Confidence 788899998877677899999999999999987765432 136666664
No 53
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=97.25 E-value=0.00055 Score=61.28 Aligned_cols=69 Identities=20% Similarity=0.264 Sum_probs=58.2
Q ss_pred CCChhHHHHHHHHHhC--CCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhC
Q 015196 25 QPRPYQEKSLSKMFGN--GRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWST 93 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~--~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~ 93 (411)
+|..-|-+|++.++.. ...+...|.+.+|+|||++++.++...++++|||+|+...+.++.+++..+++
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A~l~~~~~rp~LvVt~~~~~A~~l~~dL~~~l~ 78 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFP 78 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHHHHHHHHTCCEEEEESSHHHHHHHHHHHHHHCT
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHHHHHHHhCCCEEEEeCCHHHHHHHHHHHHHhcC
Confidence 6678898888887432 12235688899999999999999999999999999999999999999999864
No 54
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.07 E-value=0.0013 Score=53.80 Aligned_cols=41 Identities=20% Similarity=0.088 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 28 PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 28 ~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+...+.+..++.++...+.++.+|+|+|||.+|-.++..+.
T Consensus 21 ~~~~~~L~~~~~~~~~~~~ll~Gp~G~GKTt~a~~la~~l~ 61 (224)
T d1sxjb2 21 KETIDRLQQIAKDGNMPHMIISGMPGIGKTTSVHCLAHELL 61 (224)
T ss_dssp THHHHHHHHHHHSCCCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCCCCchhhHHHHHHHHh
Confidence 45666677777776556799999999999999888876553
No 55
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=97.06 E-value=0.00049 Score=65.72 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=51.4
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc-------CCceEEEEcChhhHHHHHHHHHHHhCC
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI-------KKSCLCLATNAVSVDQWAFQFKLWSTI 94 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~-------~~~~lil~P~~~l~~q~~~~~~~~~~~ 94 (411)
.|.+-|++++.. .. .+++|.|+.|||||.+++.-++.+ ..++++|+.++..++++.+++.+.++.
T Consensus 11 ~L~~eQ~~~v~~--~~---~~~lV~A~AGSGKT~~lv~ri~~ll~~~~~~p~~Il~ltft~~Aa~ei~~Ri~~~l~~ 82 (623)
T g1qhh.1 11 HLNKEQQEAVRT--TE---GPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGG 82 (623)
T ss_dssp TSCHHHHHHHHC--CS---SCEEEEECTTSCHHHHHHHHHHHHHHTTCCCGGGEEEEESSHHHHHHHHHHHHHHHGG
T ss_pred hcCHHHHHHHcC--CC---CCEEEEEeCchHHHHHHHHHHHHHHHcCCCCcccEEEEeccHHHHHHHHHHHHHhccc
Confidence 688999999863 12 389999999999999987755432 147999999999999988888876543
No 56
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=97.04 E-value=0.0035 Score=51.72 Aligned_cols=37 Identities=19% Similarity=0.185 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCC-CcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 31 EKSLSKMFGNGR-ARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 31 ~~ai~~~~~~~~-~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.+.+..++.++. ++..++.+|+|+|||.+|..++..+
T Consensus 21 ~~~L~~~i~~~~~~~~~Ll~Gp~G~GKtt~a~~~~~~l 58 (239)
T d1njfa_ 21 LTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGL 58 (239)
T ss_dssp HHHHHHHHHTTCCCSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCeeEEEECCCCCcHHHHHHHHHHHh
Confidence 333444454443 3447889999999999988877665
No 57
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.93 E-value=0.0012 Score=55.28 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=29.7
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
.++..++.+|+|+|||+++-.++..++..++.+.+
T Consensus 37 ~~~giLL~GppGtGKT~l~~ala~~~~~~~~~i~~ 71 (258)
T d1e32a2 37 PPRGILLYGPPGTGKTLIARAVANETGAFFFLING 71 (258)
T ss_dssp CCCEEEEECCTTSSHHHHHHHHHHHTTCEEEEECH
T ss_pred CCceeEEecCCCCCchHHHHHHHHHhCCeEEEEEc
Confidence 45678999999999999988888888888777765
No 58
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.91 E-value=0.0032 Score=49.60 Aligned_cols=41 Identities=12% Similarity=0.112 Sum_probs=31.1
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
--|+...+-+..++......+.++++++|.|||-++-.++.
T Consensus 25 igRd~Ei~~l~~iL~r~~k~n~lLvG~pGVGKTalv~~LA~ 65 (195)
T d1jbka_ 25 IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 65 (195)
T ss_dssp CSCHHHHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhccCCCCeEEEecCCcccHHHHHHHHH
Confidence 34777776666767655556899999999999999766654
No 59
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=96.87 E-value=0.00084 Score=55.79 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=30.1
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
.++..++.+|+|+|||.++-.++..++.+++.+.+
T Consensus 41 ~~~giLl~GppGtGKT~la~aia~~~~~~~~~i~~ 75 (247)
T d1ixza_ 41 IPKGVLLVGPPGVGKTHLARAVAGEARVPFITASG 75 (247)
T ss_dssp CCSEEEEECCTTSSHHHHHHHHHHHTTCCEEEEEH
T ss_pred CCceEEEecCCCCChhHHHHHHHHHcCCCEEEEEh
Confidence 34678999999999999999999999888887765
No 60
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.77 E-value=0.0073 Score=48.65 Aligned_cols=62 Identities=10% Similarity=-0.099 Sum_probs=35.4
Q ss_pred CCCChhHHHHHHH---HHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEcChhhHHHHHH
Q 015196 24 AQPRPYQEKSLSK---MFGNG--RARSGIIVLPCGAGKSLVGVSAACRI---KKSCLCLATNAVSVDQWAF 86 (411)
Q Consensus 24 ~~l~~~Q~~ai~~---~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P~~~l~~q~~~ 86 (411)
|-.-+..+.|+.. +.... .....++++|+|+|||..+.++..+. +..++++ +...+..+...
T Consensus 12 F~vg~~N~~a~~~~~~~~~~~~~~~n~l~l~G~~G~GKTHLl~A~~~~~~~~~~~~~~~-~~~~~~~~~~~ 81 (213)
T d1l8qa2 12 FIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYS-SADDFAQAMVE 81 (213)
T ss_dssp CCCCTTTHHHHHHHHHHHHTTTTSCSSEEEECSSSSSHHHHHHHHHHHHHHTTCCEEEE-EHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHHhCcCCCCCcEEEECCCCCcHHHHHHHHHHHhccCccceEEe-chHHHHHHHHH
Confidence 3334445555443 33332 12347899999999999977776443 3455555 44444444333
No 61
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.69 E-value=0.00062 Score=56.86 Aligned_cols=41 Identities=15% Similarity=0.072 Sum_probs=28.5
Q ss_pred ChhHHHHHHHHHhCC-CCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 27 RPYQEKSLSKMFGNG-RARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 27 ~~~Q~~ai~~~~~~~-~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.+...+.+..++... ...+.++.+|+|+|||.++..++..+
T Consensus 16 ~~~~~~~L~~~~~~~~~~~~lll~Gp~G~GKTt~~~~la~~l 57 (252)
T d1sxje2 16 NEELTNFLKSLSDQPRDLPHLLLYGPNGTGKKTRCMALLESI 57 (252)
T ss_dssp CHHHHHHHHTTTTCTTCCCCEEEECSTTSSHHHHHHTHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCCeEEEECCCCCCHHHHHHHHHHhh
Confidence 344444554444432 34468999999999999998888765
No 62
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=96.61 E-value=0.0069 Score=48.38 Aligned_cols=33 Identities=24% Similarity=0.085 Sum_probs=24.0
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI---KKSCLCLAT 76 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P 76 (411)
.-.++++|||+|||.+.+.+++++ ++++.+++.
T Consensus 10 ~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~ 45 (211)
T d2qy9a2 10 FVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAG 45 (211)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 456679999999999987776443 456666653
No 63
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=96.57 E-value=0.016 Score=46.36 Aligned_cols=51 Identities=16% Similarity=-0.053 Sum_probs=30.9
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhc---CCceEEEE-cCh-hhHHHHHHHHHHHhC
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRI---KKSCLCLA-TNA-VSVDQWAFQFKLWST 93 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~-P~~-~l~~q~~~~~~~~~~ 93 (411)
+.-.++++|||+|||.+.+.+++++ ++++.+++ .+. .=+.++.+.+.+.++
T Consensus 11 p~vi~lvGptGvGKTTTiAKLAa~~~~~~~kV~lit~Dt~R~gA~eQL~~~a~~l~ 66 (213)
T d1vmaa2 11 PFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVG 66 (213)
T ss_dssp CEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEeecccccchhHHHHHHhhhcC
Confidence 3456779999999999977766433 45665555 332 223334455555444
No 64
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=96.37 E-value=0.0069 Score=45.03 Aligned_cols=34 Identities=24% Similarity=0.161 Sum_probs=26.5
Q ss_pred eEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcChh
Q 015196 46 GIIVLPCGAGKSLVGVSAACR---IKKSCLCLATNAV 79 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~~~ 79 (411)
-++.+|+.||||.-.+..+.+ .+++++++-|...
T Consensus 10 ~lI~GpMfSGKTteLi~~~~~~~~~g~~vl~i~~~~D 46 (141)
T d1xx6a1 10 EVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEID 46 (141)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC--
T ss_pred EEEEeccccHHHHHHHHHHHHhhhcCCcEEEEEeccc
Confidence 467899999999988777643 4689999999764
No 65
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=96.34 E-value=0.0016 Score=56.18 Aligned_cols=32 Identities=22% Similarity=0.563 Sum_probs=23.7
Q ss_pred HHHhcCCccEEEEecCCCCCchhHHHHHHhhc
Q 015196 139 EEIRNREWGLLLMDEVHVVPAHMFRKVISLTK 170 (411)
Q Consensus 139 ~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~~ 170 (411)
+.+.....++|++||++.+....+..+...+.
T Consensus 119 ~~~~~~p~~Vvl~DEieK~~~~v~~~ll~~l~ 150 (315)
T d1qvra3 119 EAVRRRPYSVILFDEIEKAHPDVFNILLQILD 150 (315)
T ss_dssp HHHHHCSSEEEEESSGGGSCHHHHHHHHHHHT
T ss_pred HHHHhCCCcEEEEehHhhcCHHHHHHHHHHhc
Confidence 44445667899999999999887766665553
No 66
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=96.31 E-value=0.014 Score=46.59 Aligned_cols=50 Identities=14% Similarity=0.010 Sum_probs=31.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcC--hhhHHHHHHHHHHHhCC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACR---IKKSCLCLATN--AVSVDQWAFQFKLWSTI 94 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~--~~l~~q~~~~~~~~~~~ 94 (411)
-.++++|||+|||.+.+.++.+ .++++.+++.- +.-+.++...+.+.+++
T Consensus 12 vi~lvGp~GvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~v 66 (207)
T d1ls1a2 12 LWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGV 66 (207)
T ss_dssp EEEEECCTTTTHHHHHHHHHHHHHHTTCCEEEEECCSSCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEecccccchHHHHHHHHHHhcCC
Confidence 3566899999999997777543 35677777642 22233334445554443
No 67
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=96.14 E-value=0.082 Score=43.66 Aligned_cols=42 Identities=19% Similarity=0.238 Sum_probs=30.2
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
--|+-..+-+..++......+.++++|+|+|||.++..++.+
T Consensus 21 igRd~Ei~~l~~iL~r~~k~n~lLVG~~GvGKTalv~~la~r 62 (268)
T d1r6bx2 21 IGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWR 62 (268)
T ss_dssp CSCHHHHHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHH
T ss_pred cChHHHHHHHHHHHhcCccCCcEEECCCCCcHHHHHHHHHHH
Confidence 346666666666665545568999999999999987666543
No 68
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=96.12 E-value=0.0026 Score=54.71 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=28.3
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
+++++++++|||+|||.+|-.++..++..++.+-.
T Consensus 48 ~~~~iLl~GPpG~GKT~lAkalA~~~~~~~~~i~~ 82 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEA 82 (309)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHHTCCEEEEEG
T ss_pred CCceEEEECCCCCCHHHHHHHHhhccccchhcccc
Confidence 45789999999999999998888877766655544
No 69
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=96.00 E-value=0.0067 Score=49.77 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=29.0
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
...+.++.+|+|+|||.+|-.++.+++..++++..
T Consensus 34 ~~~~~L~~GPpGtGKT~lA~~la~~~~~~~~~~~~ 68 (238)
T d1in4a2 34 VLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSG 68 (238)
T ss_dssp CCCCEEEESSTTSSHHHHHHHHHHHHTCCEEEEET
T ss_pred CCCeEEEECCCCCcHHHHHHHHHhccCCCcccccC
Confidence 44689999999999999999888888877766553
No 70
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=95.81 E-value=0.0043 Score=55.97 Aligned_cols=36 Identities=14% Similarity=0.233 Sum_probs=30.1
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcCh
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNA 78 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~ 78 (411)
+.+.|+.+|||+|||++|-.++..++-+++.+-.|.
T Consensus 49 ksNILliGPTGvGKTlLAr~LAk~l~VPFv~~daT~ 84 (443)
T d1g41a_ 49 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK 84 (443)
T ss_dssp CCCEEEECCTTSSHHHHHHHHHHHTTCCEEEEEGGG
T ss_pred cccEEEECCCCCCHHHHHHHHHHHhCCCEEEeecce
Confidence 458999999999999999999888887777775443
No 71
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=95.69 E-value=0.0037 Score=52.45 Aligned_cols=34 Identities=9% Similarity=0.092 Sum_probs=28.8
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
+...++.+|||+|||.+|-.++..++..++.+.+
T Consensus 32 P~~ilL~GpPGtGKT~la~~la~~~~~~~~~i~~ 65 (273)
T d1gvnb_ 32 PTAFLLGGQPGSGKTSLRSAIFEETQGNVIVIDN 65 (273)
T ss_dssp CEEEEEECCTTSCTHHHHHHHHHHTTTCCEEECT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHhhcceEEEec
Confidence 4568899999999999999888888877777754
No 72
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=95.59 E-value=0.014 Score=46.48 Aligned_cols=51 Identities=16% Similarity=0.087 Sum_probs=32.1
Q ss_pred cceEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcC--hhhHHHHHHHHHHHhCC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACR---IKKSCLCLATN--AVSVDQWAFQFKLWSTI 94 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~--~~l~~q~~~~~~~~~~~ 94 (411)
...++++|||+|||.+.+.++.+ .++++.+++-- +.-+.++.+.+.+.+++
T Consensus 7 ~vi~lvGptGvGKTTTiaKLA~~~~~~g~kV~lit~Dt~R~gA~eQL~~~a~~l~i 62 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDTFRAAGGTQLSEWGKRLSI 62 (207)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHHHTTTCCEEEECCCCSSTTHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEeccccccchhhHhhcccccCc
Confidence 45677999999999997776543 34566666532 23343444555555554
No 73
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=95.57 E-value=0.023 Score=46.97 Aligned_cols=84 Identities=13% Similarity=0.175 Sum_probs=62.5
Q ss_pred CCCeEEEEecChhHHHHHHHHh---------CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccC-ccccCccCccEE
Q 015196 267 RGDKIIVFADNLFALTEYAMKL---------RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVG-DNSIDIPEANVI 336 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l---------~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~-~~Gid~~~~~~v 336 (411)
.|.++++.+++.--+.+..+.+ .+.++||..+..+|.++.....+| +++|+|+|.++ ...+.+.++..|
T Consensus 131 ~g~q~~~m~Pt~~La~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g-~~~iiIGThsl~~~~~~f~~Lglv 209 (264)
T d1gm5a3 131 AGFQTAFMVPTSILAIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNG-QIDVVIGTHALIQEDVHFKNLGLV 209 (264)
T ss_dssp HTSCEEEECSCHHHHHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSS-CCCEEEECTTHHHHCCCCSCCCEE
T ss_pred cccceeEEeehHhhhHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCC-CCCEEEeehHHhcCCCCcccccee
Confidence 4789999999987666655444 245789999999999999999998 99999998554 667888899999
Q ss_pred EEecCCCCCHHHHHHHhh
Q 015196 337 IQISSHAGSRRQEAQRLG 354 (411)
Q Consensus 337 i~~~~~~~s~~~~~Q~~G 354 (411)
|+..... -.+.|+.+
T Consensus 210 iiDEqH~---fgv~Qr~~ 224 (264)
T d1gm5a3 210 IIDEQHR---FGVKQREA 224 (264)
T ss_dssp EEESCCC---C-----CC
T ss_pred eeccccc---cchhhHHH
Confidence 9874432 13567643
No 74
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=95.49 E-value=0.058 Score=39.74 Aligned_cols=34 Identities=21% Similarity=0.124 Sum_probs=27.8
Q ss_pred eEEEcCCCCCHHHHHHHHHHh---cCCceEEEEcChh
Q 015196 46 GIIVLPCGAGKSLVGVSAACR---IKKSCLCLATNAV 79 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~P~~~ 79 (411)
-++.+|+.||||.-.+..+.+ .+++++++-|...
T Consensus 5 ~~i~GpMfsGKTteLi~~~~~~~~~~~kv~~ikp~~D 41 (139)
T d2b8ta1 5 EFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKID 41 (139)
T ss_dssp EEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred EEEEccccCHHHHHHHHHHHHHHHCCCcEEEEEEccc
Confidence 467899999999987777643 4789999999865
No 75
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=95.45 E-value=0.061 Score=43.71 Aligned_cols=111 Identities=15% Similarity=0.189 Sum_probs=60.9
Q ss_pred HHHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchh
Q 015196 33 SLSKMFGNG--RARSGIIVLPCGAGKSLVGVSAACRI---KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSK 107 (411)
Q Consensus 33 ai~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~ 107 (411)
.++.++.++ ...-.++.+++|+|||..++.++... +.++++++.... ..++.+.+..+ +.+...
T Consensus 14 ~LD~~l~GGi~~gsl~li~G~pGsGKT~l~~qia~~~~~~~~~~~~is~e~~-~~~~~~~~~~~-~~~~~~--------- 82 (242)
T d1tf7a2 14 RLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENACANKERAILFAYEES-RAQLLRNAYSW-GMDFEE--------- 82 (242)
T ss_dssp HHHHHTTSSEESSCEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEESSSC-HHHHHHHHHTT-SCCHHH---------
T ss_pred HHHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhccccceeeccCC-HHHHHHHHHHc-CCChHH---------
Confidence 356666643 23467788999999999998887553 567888875443 44455555443 221100
Q ss_pred hhhcCCCcEEE-EecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCc
Q 015196 108 ERFRGNAGVVV-TTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPA 159 (411)
Q Consensus 108 ~~~~~~~~I~v-~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~ 159 (411)
........+ ..+... .........+...+...+++++|+|-++.+..
T Consensus 83 --~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~i~~~~~~~vviDs~~~~~~ 130 (242)
T d1tf7a2 83 --MERQNLLKIVCAYPES---AGLEDHLQIIKSEINDFKPARIAIDSLSALAR 130 (242)
T ss_dssp --HHHTTSEEECCCCGGG---SCHHHHHHHHHHHHHTTCCSEEEEECHHHHTS
T ss_pred --HhhcCceEEEEeecch---hhHHHHHHHHHHHHHhcCCceeeeecchhhhc
Confidence 000111111 111111 11112233444555667899999998877653
No 76
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=95.45 E-value=0.0058 Score=50.51 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=28.0
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEE
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 75 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~ 75 (411)
+.+++++.+|+|+|||.+|-.++..++.+++-+.
T Consensus 39 p~~~vLL~GppGtGKT~la~alA~~~~~~~~~i~ 72 (246)
T d1d2na_ 39 PLVSVLLEGPPHSGKTALAAKIAEESNFPFIKIC 72 (246)
T ss_dssp SEEEEEEECSTTSSHHHHHHHHHHHHTCSEEEEE
T ss_pred CCeEEEEECcCCCCHHHHHHHHhhcccccccccc
Confidence 3456899999999999999888888887766654
No 77
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=95.40 E-value=0.0034 Score=53.76 Aligned_cols=23 Identities=13% Similarity=0.036 Sum_probs=19.1
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
.++.+|+|+|||++|-.++..++
T Consensus 126 ~l~~G~pG~GKT~la~ala~~~~ 148 (321)
T d1w44a_ 126 VIVTGKGNSGKTPLVHALGEALG 148 (321)
T ss_dssp EEEECSSSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCccHHHHHHHHHHHhc
Confidence 44579999999999988887765
No 78
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=95.40 E-value=0.0072 Score=50.17 Aligned_cols=36 Identities=22% Similarity=0.337 Sum_probs=29.7
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcC
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATN 77 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~ 77 (411)
.++..++.+|+|+|||+++-.++..++..++.+.+.
T Consensus 44 ~~~~iLL~GppGtGKT~la~~iA~~~~~~~~~i~~~ 79 (256)
T d1lv7a_ 44 IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGS 79 (256)
T ss_dssp CCCEEEEECCTTSCHHHHHHHHHHHHTCCEEEECSC
T ss_pred CCCeEEeeCCCCCCccHHHHHHHHHcCCCEEEEEhH
Confidence 356789999999999999988888888777776553
No 79
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=95.39 E-value=0.018 Score=47.14 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=27.2
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEE
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 75 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~ 75 (411)
...+.++.+|+|+|||.+|-.++..++..+..+.
T Consensus 34 ~~~~~Ll~GPpG~GKTtla~~la~~~~~~~~~~~ 67 (239)
T d1ixsb2 34 PLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTS 67 (239)
T ss_dssp CCCCEEEECCTTSCHHHHHHHHHHHHTCCEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhCCCeEecc
Confidence 3568999999999999999888877776655554
No 80
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=95.31 E-value=0.047 Score=47.93 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=29.6
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.-|+--.+-+-.++......+.++++++|.|||-++-.++.
T Consensus 25 ~gr~~ei~~~~~~L~r~~k~n~llvG~~GvGKtaiv~~la~ 65 (387)
T d1qvra2 25 IGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQ 65 (387)
T ss_dssp CSCHHHHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhcCCCCCCeEECCCCCCHHHHHHHHHH
Confidence 34776666666666544456889999999999998765553
No 81
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.26 E-value=0.034 Score=40.71 Aligned_cols=34 Identities=21% Similarity=0.177 Sum_probs=27.1
Q ss_pred eEEEcCCCCCHHHHHHHHHH---hcCCceEEEEcChh
Q 015196 46 GIIVLPCGAGKSLVGVSAAC---RIKKSCLCLATNAV 79 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~---~~~~~~lil~P~~~ 79 (411)
-++.+|+.||||.-.+..+. ..+++++++-|...
T Consensus 5 ~li~GpMfsGKTt~Li~~~~~~~~~g~~v~~ikp~~D 41 (133)
T d1xbta1 5 QVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKD 41 (133)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHTTTCCEEEEEETTC
T ss_pred EEEEecccCHHHHHHHHHHHHHHHcCCcEEEEecccc
Confidence 46789999999998777654 34678999999765
No 82
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=95.23 E-value=0.013 Score=51.33 Aligned_cols=33 Identities=18% Similarity=0.276 Sum_probs=25.3
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEE
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCL 74 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil 74 (411)
+..+.++.+|||+|||.+|=.++..++..++.+
T Consensus 67 p~~niLfiGPTGvGKTElAk~LA~~~~~~~ir~ 99 (364)
T d1um8a_ 67 SKSNILLIGPTGSGKTLMAQTLAKHLDIPIAIS 99 (364)
T ss_dssp CCCCEEEECCTTSSHHHHHHHHHHHTTCCEEEE
T ss_pred CCcceeeeCCCCccHHHHHHHHHhhcccceeeh
Confidence 456899999999999999877766665554433
No 83
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=95.22 E-value=0.065 Score=43.25 Aligned_cols=94 Identities=13% Similarity=0.103 Sum_probs=70.5
Q ss_pred hcCCCcHHHHHHHHHHhhhcCCCeEEEEecChhHHHHHHHHh---------CCceeeCCCCHHHHHHHHHHhcCCCCeeE
Q 015196 247 VMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEYAMKL---------RKPMIYGATSHVERTKILQAFKCSRDLNT 317 (411)
Q Consensus 247 ~~~~~k~~~~~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l---------~~~~i~g~~~~~~r~~~~~~f~~~~~~~v 317 (411)
+.-+.|-.+....+...- ..|.++++.++.+--+.+..+.+ ++.++||..+..+|..+.+.+.+| +++|
T Consensus 84 dvGsGKT~V~~~a~~~~~-~~g~qv~~l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g-~~~i 161 (233)
T d2eyqa3 84 DVGFGKTEVAMRAAFLAV-DNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEG-KIDI 161 (233)
T ss_dssp CCCTTTHHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTT-CCSE
T ss_pred CCCCCcHHHHHHHHHHHH-HcCCceEEEccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCC-CCCE
Confidence 334456554444443222 46889999999987777766665 245689999999999999999998 9999
Q ss_pred EEeeccC-ccccCccCccEEEEecCC
Q 015196 318 IFLSKVG-DNSIDIPEANVIIQISSH 342 (411)
Q Consensus 318 lv~t~~~-~~Gid~~~~~~vi~~~~~ 342 (411)
||.|.++ ...+.++++..||+....
T Consensus 162 viGths~l~~~~~f~~LgLiIiDEeH 187 (233)
T d2eyqa3 162 LIGTHKLLQSDVKFKDLGLLIVDEEH 187 (233)
T ss_dssp EEECTHHHHSCCCCSSEEEEEEESGG
T ss_pred EEeehhhhccCCccccccceeeechh
Confidence 9999655 557899999999987443
No 84
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=95.20 E-value=0.017 Score=48.04 Aligned_cols=45 Identities=20% Similarity=0.133 Sum_probs=33.7
Q ss_pred CCCChhHHHHHHHHHh----C--CCCcceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 24 AQPRPYQEKSLSKMFG----N--GRARSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~----~--~~~~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+.=|+.|.+.+..++. + ..+.+.++.+|+|+|||.++-.++..+.
T Consensus 18 l~~Re~ei~~l~~~l~~~l~~~~~~~~~lll~GppGtGKT~l~~~l~~~l~ 68 (276)
T d1fnna2 18 LPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYK 68 (276)
T ss_dssp CTTCHHHHHHHHHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCCCceEEECCCCCCHHHHHHHHHHHHh
Confidence 4557888888777753 2 2346789999999999999877776653
No 85
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.15 E-value=0.021 Score=47.09 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=28.2
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
....++.||+|+|||.++-.++.+++..++.+-.
T Consensus 52 ~~~lll~GPpG~GKTt~a~~la~~~~~~~~~~~~ 85 (253)
T d1sxja2 52 FRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNA 85 (253)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHTTCEEEEECT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHhhhhcccc
Confidence 3468999999999999999999988877666544
No 86
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=95.10 E-value=0.014 Score=47.45 Aligned_cols=40 Identities=20% Similarity=0.228 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 28 PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 28 ~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
+...+.+..++.++...+.++.||+|+|||.++-.++.++
T Consensus 30 ~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtla~~iak~l 69 (231)
T d1iqpa2 30 EHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALAREL 69 (231)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEESCTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCeEEEECCCCCcHHHHHHHHHHHH
Confidence 4445555556665555688999999999999988777655
No 87
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.08 E-value=0.014 Score=47.42 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=32.2
Q ss_pred ChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 27 RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 27 ~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.+...+.+..++.++...+.++.+|+|+|||.++..++.++
T Consensus 19 ~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKttl~~~la~~l 59 (227)
T d1sxjc2 19 QNEVITTVRKFVDEGKLPHLLFYGPPGTGKTSTIVALAREI 59 (227)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCeEEEECCCCCChhHHHHHHHHHh
Confidence 45666777777777655578999999999999988887654
No 88
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.87 E-value=0.015 Score=47.47 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=31.7
Q ss_pred ChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 27 RPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 27 ~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.+...+.+..++.+....+.++.+|+|+|||.++-.++.++
T Consensus 17 ~~~~~~~l~~~i~~~~~~~lll~Gp~G~GKTtl~~~i~~~l 57 (237)
T d1sxjd2 17 QDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKEL 57 (237)
T ss_dssp CCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHcCCCCeEEEECCCCCChHHHHHHHHHHH
Confidence 34556777788776655578999999999999988877653
No 89
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=94.78 E-value=0.032 Score=44.38 Aligned_cols=51 Identities=12% Similarity=-0.075 Sum_probs=27.3
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEcC--hhhHHHHHHHHHHHhCC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI---KKSCLCLATN--AVSVDQWAFQFKLWSTI 94 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P~--~~l~~q~~~~~~~~~~~ 94 (411)
.-.++++|||+|||.+.+.+++++ ++++.+++-- +.=+.++.+.+.+..++
T Consensus 13 ~vi~lvGptGvGKTTTiAKLA~~~~~~g~kV~lit~Dt~R~ga~eQL~~~a~~l~v 68 (211)
T d1j8yf2 13 YVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGADVYRPAALEQLQQLGQQIGV 68 (211)
T ss_dssp EEEEEECSCCC----HHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEeeccccchhHHHHHhccccCc
Confidence 456678999999999977766433 4566666642 22233344455554443
No 90
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=94.57 E-value=0.11 Score=42.72 Aligned_cols=54 Identities=24% Similarity=0.295 Sum_probs=37.1
Q ss_pred HHHHHHHh-CC--CCcceEEEcCCCCCHHHHHHHHHH---hcCCceEEEEcChhhHHHHH
Q 015196 32 KSLSKMFG-NG--RARSGIIVLPCGAGKSLVGVSAAC---RIKKSCLCLATNAVSVDQWA 85 (411)
Q Consensus 32 ~ai~~~~~-~~--~~~~~ll~~~tG~GKT~~a~~~~~---~~~~~~lil~P~~~l~~q~~ 85 (411)
.+++.++. ++ ..+-+.+.+|+|+|||.+++.++. ..+..++|+----+...++.
T Consensus 40 ~~lD~~Lg~GGi~~g~itei~G~~gsGKTtl~l~~~~~~q~~g~~~vyidtE~~~~~~~a 99 (263)
T d1u94a1 40 LSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYA 99 (263)
T ss_dssp HHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHH
T ss_pred HHHHHHhcCCCccCceEEEEecCCCcHHHHHHHHHHHHHHcCCCEEEEEccccccCHHHH
Confidence 36777775 43 224567889999999999887764 34577888876656555443
No 91
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=94.36 E-value=0.017 Score=43.80 Aligned_cols=28 Identities=36% Similarity=0.478 Sum_probs=24.2
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCce
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSC 71 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~ 71 (411)
++.++.+|+|+|||.+|-.++.+++-++
T Consensus 3 k~I~l~G~~GsGKSTvak~La~~L~~~~ 30 (169)
T d1kaga_ 3 RNIFLVGPMGAGKSTIGRQLAQQLNMEF 30 (169)
T ss_dssp CCEEEECCTTSCHHHHHHHHHHHTTCEE
T ss_pred CeEEEECCCCCCHHHHHHHHHHHhCCCe
Confidence 4788899999999999999998887654
No 92
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=94.27 E-value=0.027 Score=48.23 Aligned_cols=49 Identities=14% Similarity=0.105 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcC--CceEEEEcChhh
Q 015196 30 QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIK--KSCLCLATNAVS 80 (411)
Q Consensus 30 Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~--~~~lil~P~~~l 80 (411)
+...+..++..+ .+.++.++||||||..+-.++.... .+++.+-...++
T Consensus 155 ~~~~l~~~v~~~--~nili~G~tgSGKTT~l~al~~~i~~~~rivtiEd~~El 205 (323)
T d1g6oa_ 155 AISAIKDGIAIG--KNVIVCGGTGSGKTTYIKSIMEFIPKEERIISIEDTEEI 205 (323)
T ss_dssp HHHHHHHHHHHT--CCEEEEESTTSSHHHHHHHHGGGSCTTCCEEEEESSCCC
T ss_pred HHHHHHHHHHhC--CCEEEEeeccccchHHHHHHhhhcccccceeeccchhhh
Confidence 444555555544 4899999999999998766665543 588888777764
No 93
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.19 E-value=0.017 Score=48.19 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=29.7
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
.++..++.+|+|+|||..+-.++..++.+++.+.+
T Consensus 40 ~~~giLL~Gp~GtGKT~l~~ala~~~~~~~~~~~~ 74 (265)
T d1r7ra3 40 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKG 74 (265)
T ss_dssp CCCEEEEBCCTTSSHHHHHHHHHHHTTCEEEEECH
T ss_pred CCCeEEEECCCCCcchhHHHHHHHHhCCcEEEEEH
Confidence 35678999999999999999999999887777754
No 94
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=94.16 E-value=0.16 Score=41.94 Aligned_cols=53 Identities=23% Similarity=0.354 Sum_probs=36.7
Q ss_pred HHHHHHh-CC--CCcceEEEcCCCCCHHHHHHHHHH---hcCCceEEEEcChhhHHHHH
Q 015196 33 SLSKMFG-NG--RARSGIIVLPCGAGKSLVGVSAAC---RIKKSCLCLATNAVSVDQWA 85 (411)
Q Consensus 33 ai~~~~~-~~--~~~~~ll~~~tG~GKT~~a~~~~~---~~~~~~lil~P~~~l~~q~~ 85 (411)
+++.++. ++ ..+-+.+.+|.|+|||.+++.++. +.+..++|+-.-.++..++.
T Consensus 44 ~lD~~Lg~GGip~g~itei~G~~~sGKT~l~l~~~~~aqk~g~~v~yiDtE~~~~~~~a 102 (268)
T d1xp8a1 44 SLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYA 102 (268)
T ss_dssp HHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCCCCHHHH
T ss_pred HHHHHhcCCCccCceEEEEecCCccchHHHHHHHHHHHHhCCCEEEEEECCccCCHHHH
Confidence 6777775 42 233556789999999999887764 34578888876666555443
No 95
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=94.07 E-value=0.031 Score=48.75 Aligned_cols=43 Identities=19% Similarity=0.092 Sum_probs=32.1
Q ss_pred HHHHHHhCC-CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEE
Q 015196 33 SLSKMFGNG-RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 75 (411)
Q Consensus 33 ai~~~~~~~-~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~ 75 (411)
++..++.+. ..+..++.+|+|+|||..|..++..++.+++-+-
T Consensus 143 ~l~~~~~~~~~~~~~~~~g~~~~gk~~~~~~~~~~~~~~~i~in 186 (362)
T d1svma_ 143 FLKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCGGKALNVN 186 (362)
T ss_dssp HHHHHHHCCTTCCEEEEECSTTSSHHHHHHHHHHHHCCEEECCS
T ss_pred HHHHHHhCCCCcCeEEEECCCCCCHHHHHHHHHHHcCCCEEEEE
Confidence 334444443 3346677899999999999999999998877663
No 96
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=93.95 E-value=0.021 Score=43.72 Aligned_cols=28 Identities=18% Similarity=0.235 Sum_probs=24.2
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
..++.+|+|||||.++-.++.+++..++
T Consensus 6 ~I~i~G~pGsGKTTia~~La~~l~~~~i 33 (173)
T d1rkba_ 6 NILLTGTPGVGKTTLGKELASKSGLKYI 33 (173)
T ss_dssp CEEEECSTTSSHHHHHHHHHHHHCCEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCcEE
Confidence 6789999999999999999888886554
No 97
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=93.94 E-value=0.032 Score=47.69 Aligned_cols=30 Identities=27% Similarity=0.260 Sum_probs=23.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCL 74 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil 74 (411)
..++.+|||+|||.+|-.++..++.+.+.+
T Consensus 54 ~~lf~Gp~GvGKT~lak~la~~l~~~~i~~ 83 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTVQLSKALGIELLRF 83 (315)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEECCCcchhHHHHHHHHhhccCCeeEe
Confidence 577889999999999988877776554433
No 98
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=93.91 E-value=0.034 Score=49.31 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=37.1
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcC---CceEEEEc
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIK---KSCLCLAT 76 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~---~~~lil~P 76 (411)
.-+.+.|.+.+..++... .+-+++.+|||||||.++...+..+. ++++-+-.
T Consensus 140 LG~~~~~~~~l~~l~~~~-~GliLvtGpTGSGKSTTl~~~l~~~~~~~~~i~tiEd 194 (401)
T d1p9ra_ 140 LGMTAHNHDNFRRLIKRP-HGIILVTGPTGSGKSTTLYAGLQELNSSERNILTVED 194 (401)
T ss_dssp SCCCHHHHHHHHHHHTSS-SEEEEEECSTTSCHHHHHHHHHHHHCCTTSCEEEEES
T ss_pred hcccHHHHHHHHHHHhhh-hceEEEEcCCCCCccHHHHHHhhhhcCCCceEEEecc
Confidence 457789999999887653 23566789999999999888776553 34444443
No 99
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=93.91 E-value=0.12 Score=42.67 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=38.1
Q ss_pred HHHHHHHh-CC--CCcceEEEcCCCCCHHHHHHHHHH---hcCCceEEEEcChhhHHHHHHH
Q 015196 32 KSLSKMFG-NG--RARSGIIVLPCGAGKSLVGVSAAC---RIKKSCLCLATNAVSVDQWAFQ 87 (411)
Q Consensus 32 ~ai~~~~~-~~--~~~~~ll~~~tG~GKT~~a~~~~~---~~~~~~lil~P~~~l~~q~~~~ 87 (411)
..++.++. ++ ..+-..+.+|+|+|||.+++.++. ..+..++|+-.-..+..++.+.
T Consensus 46 ~~lD~~lg~gG~~~g~i~e~~G~~~~GKT~l~l~~~~~~q~~g~~~vyIDtE~~~~~e~a~~ 107 (269)
T d1mo6a1 46 IALDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGVAAFIDAEHALDPDYAKK 107 (269)
T ss_dssp HHHHHHTSSSSBCSSSEEEEECSSSSSHHHHHHHHHHHHHHTTCEEEEEESSCCCCHHHHHH
T ss_pred HHHHHhhccCCcccceeEEEecCCCcHHHHHHHHHHHHHhcCCCEEEEEECCccCCHHHHHH
Confidence 36777775 33 223456789999999999887764 3467788887766665555443
No 100
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=93.72 E-value=0.021 Score=47.78 Aligned_cols=46 Identities=15% Similarity=0.233 Sum_probs=30.7
Q ss_pred CCCCCChhHHHHHHHHH-----hCCCCcc----eEEEcCCCCCHHHHHHHHHHhc
Q 015196 22 PHAQPRPYQEKSLSKMF-----GNGRARS----GIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 22 ~~~~l~~~Q~~ai~~~~-----~~~~~~~----~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
..+.-|+-|.+.+..++ .+..+.+ .++++|+|+|||.++-.++..+
T Consensus 16 ~~~~~Re~e~~~l~~~l~~~~~~~~~~~~~~~~l~l~GppGtGKT~l~~~l~~~l 70 (287)
T d1w5sa2 16 PELRVRRGEAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRV 70 (287)
T ss_dssp SSCSSSCHHHHHHHHHHHHHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCCCCCcceEEEeECCCCCCHHHHHHHHHHHH
Confidence 34566888988887653 2221111 3456999999999987776554
No 101
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=93.54 E-value=0.028 Score=43.15 Aligned_cols=31 Identities=16% Similarity=0.025 Sum_probs=25.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 75 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~ 75 (411)
-.++.+|+|||||.++-.+..+++.+++.+.
T Consensus 6 iI~l~G~~GsGKSTia~~La~~lg~~~~~~~ 36 (176)
T d1zp6a1 6 ILLLSGHPGSGKSTIAEALANLPGVPKVHFH 36 (176)
T ss_dssp EEEEEECTTSCHHHHHHHHHTCSSSCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCCEEEec
Confidence 4567899999999999888888776766553
No 102
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=93.51 E-value=0.029 Score=42.82 Aligned_cols=26 Identities=35% Similarity=0.368 Sum_probs=21.7
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
-.++.+|+|+|||.+|-.++.+++..
T Consensus 4 lI~i~G~~GsGKTTva~~L~~~~~~~ 29 (176)
T d2bdta1 4 LYIITGPAGVGKSTTCKRLAAQLDNS 29 (176)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSSSE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCC
Confidence 46788999999999998888877654
No 103
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=93.27 E-value=0.057 Score=48.90 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=38.0
Q ss_pred CCcceEEEcCCCCCHHHHHHHHHHhc---------------CCceEEEEcChhhHHHHHHHHHHHh
Q 015196 42 RARSGIIVLPCGAGKSLVGVSAACRI---------------KKSCLCLATNAVSVDQWAFQFKLWS 92 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~~~~~---------------~~~~lil~P~~~l~~q~~~~~~~~~ 92 (411)
..+..+|.|+.|||||.+...-+.++ ...+|+|+=|+..+.++.+++...+
T Consensus 15 ~~g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Emk~RI~~~L 80 (485)
T d1w36b1 15 LQGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNI 80 (485)
T ss_dssp CSSCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHHHHHHHHHH
Confidence 34578999999999999866644322 0359999999988888887775543
No 104
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=93.20 E-value=0.027 Score=43.59 Aligned_cols=29 Identities=17% Similarity=0.124 Sum_probs=24.5
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
+..++.||+|+|||..+-.++.+++...+
T Consensus 8 K~I~i~G~~GsGKTTla~~La~~~~~~~i 36 (192)
T d1lw7a2 8 KTVAILGGESSGKSVLVNKLAAVFNTTSA 36 (192)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHTTCEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCeE
Confidence 57889999999999999998888875443
No 105
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=93.10 E-value=0.23 Score=40.45 Aligned_cols=38 Identities=18% Similarity=0.028 Sum_probs=24.4
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc--CCceEEEEcChhhH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI--KKSCLCLATNAVSV 81 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~--~~~~lil~P~~~l~ 81 (411)
.++++.+++|+|||.+|-.+-... ....++.+....+.
T Consensus 24 ~pvlI~Ge~GtGK~~~A~~ih~~s~~~~~~~~~~~~~~~~ 63 (247)
T d1ny5a2 24 CPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIP 63 (247)
T ss_dssp SCEEEECSTTSSHHHHHHHHHHHSTTTTSCEEEEETTTSC
T ss_pred CCEEEECCCCcCHHHHHHHHHHhcCCcccccccchhhhhh
Confidence 589999999999999876654332 23344444444433
No 106
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=92.91 E-value=0.27 Score=38.59 Aligned_cols=101 Identities=10% Similarity=0.022 Sum_probs=69.3
Q ss_pred HhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecceecccCCCChhhH
Q 015196 65 CRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYNMVAFGGKRSEESE 135 (411)
Q Consensus 65 ~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~~l~~~~~~~~~~~ 135 (411)
...+.++.||||..+-.+.....+.+. ++..+++.++|.... ...+..+|+|||.-.=
T Consensus 28 l~rGgQvy~V~p~I~~~e~~~~~l~~~--~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~TtvIE----------- 94 (211)
T d2eyqa5 28 ILRGGQVYYLYNDVENIQKAAERLAEL--VPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIE----------- 94 (211)
T ss_dssp HTTTCEEEEECCCSSCHHHHHHHHHHH--CTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESSTTG-----------
T ss_pred HHcCCeEEEEEcCccchhhHHHHHHHh--CCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEehhhh-----------
Confidence 344679999999998888888888886 556789999986543 3457789999997311
Q ss_pred HHHHHHhcCCccEEEEecCCCCCchhHHHHHHhh----ccccEEEEeeec
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLT----KSHCKLGLTATL 181 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~----~~~~~i~lSATp 181 (411)
.-++-.+..++|+..|+++.-.+...+.... ...+.++++-.+
T Consensus 95 ---vGiDvpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~~s~c~l~~~~~ 141 (211)
T d2eyqa5 95 ---TGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWLLTPHP 141 (211)
T ss_dssp ---GGSCCTTEEEEEETTTTSSCHHHHHHHHTTCCBTTBCEEEEEEECCG
T ss_pred ---hccCCCCCcEEEEecchhccccccccccceeeecCccceEEEEecCC
Confidence 1122345678999999999866555454443 223566665433
No 107
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=92.84 E-value=0.055 Score=41.32 Aligned_cols=30 Identities=20% Similarity=0.081 Sum_probs=25.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCL 74 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil 74 (411)
-.++.+++|||||.+|-.+..+++...+.+
T Consensus 5 iI~l~G~~GsGKsTva~~L~~~l~~~~~~~ 34 (178)
T d1qhxa_ 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAF 34 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHSSSCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCCeEEe
Confidence 567789999999999999999888666554
No 108
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.82 E-value=0.033 Score=43.01 Aligned_cols=24 Identities=25% Similarity=0.259 Sum_probs=20.0
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
++++|.+|+|+|||.++..++..+
T Consensus 2 k~v~ItG~~GtGKTtl~~~i~~~l 25 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTTLIHKASEVL 25 (189)
T ss_dssp CCEEEESCCSSCHHHHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHHHHH
Confidence 578999999999999977776544
No 109
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=92.47 E-value=0.063 Score=40.91 Aligned_cols=29 Identities=17% Similarity=0.074 Sum_probs=23.8
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
.+.++.+|+|+|||.++-.+..+++...+
T Consensus 6 ~~I~i~G~~GsGKTT~~~~La~~l~~~~~ 34 (174)
T d1y63a_ 6 INILITGTPGTGKTSMAEMIAAELDGFQH 34 (174)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHSTTEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHhCCCcE
Confidence 46889999999999999888888764443
No 110
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=92.47 E-value=0.051 Score=41.58 Aligned_cols=28 Identities=21% Similarity=0.197 Sum_probs=24.1
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
..++.+++|+|||.++-.++.+++-+++
T Consensus 4 ~Iil~G~~GsGKSTia~~LA~~Lg~~~i 31 (170)
T d1e6ca_ 4 PIFMVGARGCGMTTVGRELARALGYEFV 31 (170)
T ss_dssp CEEEESCTTSSHHHHHHHHHHHHTCEEE
T ss_pred CEEEECCCCCCHHHHHHHHHHHhCCCEE
Confidence 6788899999999999999999986544
No 111
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=92.40 E-value=0.15 Score=41.52 Aligned_cols=57 Identities=19% Similarity=0.254 Sum_probs=35.3
Q ss_pred HHHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc---------CCceEEEEcChhhHHHHHHHHH
Q 015196 33 SLSKMFGNG--RARSGIIVLPCGAGKSLVGVSAACRI---------KKSCLCLATNAVSVDQWAFQFK 89 (411)
Q Consensus 33 ai~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~---------~~~~lil~P~~~l~~q~~~~~~ 89 (411)
.++.++.++ ...-++|.+|+|+|||..++..+.+. +..++++.-..+...++.....
T Consensus 24 ~LD~ll~GGlp~G~~~li~G~pGsGKT~~~lq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (254)
T d1pzna2 24 SLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIA 91 (254)
T ss_dssp HHHHHHTSSEESSEEEEEEESTTSSHHHHHHHHHHHTTSCGGGTSCSCEEEEEESSSCCCHHHHHHHH
T ss_pred HHHHhhcCCccCCEEEEEEcCCCCCHHHHHHHHHHHhhchHHhcCCCceEEEEeccchhHHHHHHHHH
Confidence 345566553 22356788999999999999887543 3466666544443334444333
No 112
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=92.40 E-value=0.053 Score=41.26 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=22.7
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCce
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSC 71 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~ 71 (411)
+-.++.+++|||||.++-.+..+++...
T Consensus 7 ~iivl~G~~GsGKsT~a~~La~~l~~~~ 34 (171)
T d1knqa_ 7 HIYVLMGVSGSGKSAVASEVAHQLHAAF 34 (171)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHTCEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhCCCe
Confidence 4567789999999999998888876433
No 113
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=92.35 E-value=0.057 Score=40.21 Aligned_cols=24 Identities=17% Similarity=-0.003 Sum_probs=18.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
-.++.+++|||||.+|-.++....
T Consensus 4 lIii~G~pGsGKTTla~~L~~~~~ 27 (152)
T d1ly1a_ 4 IILTIGCPGSGKSTWAREFIAKNP 27 (152)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHHHhCC
Confidence 356789999999999876665544
No 114
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=92.27 E-value=0.054 Score=41.08 Aligned_cols=28 Identities=21% Similarity=0.190 Sum_probs=23.5
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
+.++.+++|+|||.++-.++.+++-.++
T Consensus 2 ~I~liG~~GsGKsTi~k~La~~l~~~~~ 29 (161)
T d1viaa_ 2 NIVFIGFMGSGKSTLARALAKDLDLVFL 29 (161)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHHTCEEE
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCEE
Confidence 5788899999999999999988875443
No 115
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=92.02 E-value=0.051 Score=42.39 Aligned_cols=27 Identities=11% Similarity=-0.048 Sum_probs=22.8
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcCC
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIKK 69 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~~ 69 (411)
|...++.+|+|||||.++-.++.+++-
T Consensus 3 Pm~I~i~GppGsGKsT~a~~La~~~~~ 29 (189)
T d1zaka1 3 PLKVMISGAPASGKGTQCELIKTKYQL 29 (189)
T ss_dssp SCCEEEEESTTSSHHHHHHHHHHHHCC
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHCC
Confidence 457889999999999999888877763
No 116
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.94 E-value=0.087 Score=42.68 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=34.0
Q ss_pred HHHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc---------CCceEEEEcChhhHHHHHH
Q 015196 33 SLSKMFGNG--RARSGIIVLPCGAGKSLVGVSAACRI---------KKSCLCLATNAVSVDQWAF 86 (411)
Q Consensus 33 ai~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~---------~~~~lil~P~~~l~~q~~~ 86 (411)
.++.++.++ ...-+++.+|+|+|||..++.++... +..++++.-......++..
T Consensus 22 ~LD~ll~GGi~~G~~~li~G~pGsGKT~l~lq~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 86 (251)
T d1szpa2 22 NLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLV 86 (251)
T ss_dssp HHHHHHTSSEESSSEEEEEESTTSSHHHHHHHHTTTTTSCTTTTCCSCEEEEEESSSCCCGGGGH
T ss_pred HHHhhhCCCCcCCeEEEEEcCCCCCHHHHHHHHHHHhhhhhhhccCCceEEEEeecchHHHHHHH
Confidence 456666553 22467788999999999998876432 3467777644433333333
No 117
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=91.93 E-value=0.063 Score=41.41 Aligned_cols=25 Identities=16% Similarity=0.064 Sum_probs=21.7
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKK 69 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~ 69 (411)
+.+|.+|+|||||.++-.++.+++-
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~~~ 26 (182)
T d1zina1 2 NLVLMGLPGAGKGTQAEKIVAAYGI 26 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCC
Confidence 4688999999999999888888764
No 118
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.93 E-value=0.072 Score=40.45 Aligned_cols=28 Identities=29% Similarity=0.319 Sum_probs=23.8
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
+.++.+++|+|||.++-.++.+++-.++
T Consensus 3 ~IvliG~~G~GKSTig~~La~~l~~~fi 30 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIGRRLAKALGVGLL 30 (165)
T ss_dssp SEEEECSTTSSHHHHHHHHHHHHTCCEE
T ss_pred cEEEECCCCCCHHHHHHHHHHHhCCCeE
Confidence 5778899999999999999988886644
No 119
>d1em8a_ c.128.1.1 (A:) DNA polymerase III chi subunit {Escherichia coli [TaxId: 562]}
Probab=91.86 E-value=0.67 Score=34.05 Aligned_cols=107 Identities=7% Similarity=0.052 Sum_probs=67.3
Q ss_pred cCCCeEEEEecChhHHHHHHHHh----CCcee-eCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEEEEec
Q 015196 266 QRGDKIIVFADNLFALTEYAMKL----RKPMI-YGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVIIQIS 340 (411)
Q Consensus 266 ~~~~~~ivf~~~~~~~~~l~~~l----~~~~i-~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~vi~~~ 340 (411)
..+.+++|+|++.+.++.+-+.| ...++ |+-.... .. ....|++++... -..+..+++|.+.
T Consensus 34 ~~g~ri~I~~~d~~~~~~lD~~LWt~~~~sFiPH~~~~~~---------~~-~~~PI~l~~~~~---~~~~~~dvlinl~ 100 (147)
T d1em8a_ 34 RSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEG---------PR-GGAPVEIAWPQK---RSSSRRDILISLR 100 (147)
T ss_dssp HTTCCEEEECSSHHHHHHHHHHHHHCSTTCCCCEEETTCS---------ST-TCCSEEEECTTS---CCCSCCSEEEECC
T ss_pred HCCCEEEEEeCCHHHHHHHHHHHhCCCCcccccccccCCC---------cc-CCCCEEecCCCC---CCCccceEEEECC
Confidence 35889999999999999999999 33343 4332210 01 245688876421 2223456778773
Q ss_pred CCCCCHHHHHHHhhcccccCCCccccccCCCcceeEEEEEeecCCchhHHHHHHHHHHHhhcCCceeEee
Q 015196 341 SHAGSRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMFYSTKRQQFLIDQGYSFKVHH 410 (411)
Q Consensus 341 ~~~~s~~~~~Q~~GR~~R~~~~k~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~ 410 (411)
... + ...+ | .-.++.++..+......+|.|=+.+++.||.+.=++
T Consensus 101 ~~~--p-~~~~------~----------------f~Rvieiv~~de~~~~~aR~rwk~yk~~G~~l~~~~ 145 (147)
T d1em8a_ 101 TSF--A-DFAT------A----------------FTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTAT 145 (147)
T ss_dssp SSC--C-GGGG------G----------------CSEEEEEECSSHHHHHHHHHHHHHHHHTTEEEEEEC
T ss_pred CCC--c-hhhh------c----------------cCEEEEEECcCHHHHHHHHHHHHHHHHCCCCccccc
Confidence 221 1 1111 1 123667777666667788999999999999987543
No 120
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=91.69 E-value=0.07 Score=41.27 Aligned_cols=26 Identities=15% Similarity=0.074 Sum_probs=22.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
+.++.+|+|||||.+|-.++.+++-.
T Consensus 2 ~I~i~G~pGSGKsT~a~~La~~~g~~ 27 (182)
T d1s3ga1 2 NIVLMGLPGAGKGTQADRIVEKYGTP 27 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHCCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCc
Confidence 46789999999999999888888643
No 121
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=91.38 E-value=0.069 Score=41.74 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=22.1
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+...++.+|+|||||.+|-.++.+++
T Consensus 6 p~iI~i~G~pGSGKsT~a~~La~~~g 31 (194)
T d1qf9a_ 6 PNVVFVLGGPGSGKGTQCANIVRDFG 31 (194)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHC
T ss_pred CcEEEEECCCCCCHHHHHHHHHHHHC
Confidence 34567899999999999988888876
No 122
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.35 E-value=0.078 Score=40.91 Aligned_cols=26 Identities=27% Similarity=0.326 Sum_probs=22.2
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
+.++.+|+|||||.++-.++.+++-.
T Consensus 2 ~I~i~G~pGsGKsT~a~~La~~~g~~ 27 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAVKLAEKLGIP 27 (181)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHTCC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCc
Confidence 56889999999999999988888643
No 123
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.18 E-value=0.09 Score=40.56 Aligned_cols=25 Identities=24% Similarity=0.280 Sum_probs=21.9
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
.+.++.+|+|||||.++-.++.+++
T Consensus 3 mrIvl~G~pGSGKtT~a~~La~~~g 27 (180)
T d1akya1 3 IRMVLIGPPGAGKGTQAPNLQERFH 27 (180)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHHC
T ss_pred eEEEEECCCCCCHHHHHHHHHHHhC
Confidence 3678899999999999999888876
No 124
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=91.18 E-value=0.084 Score=41.17 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=22.4
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
-+.++.+|+|||||.++-.++.+++
T Consensus 7 mrIiliG~PGSGKtT~a~~La~~~g 31 (189)
T d2ak3a1 7 LRAAIMGAPGSGKGTVSSRITKHFE 31 (189)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHBC
T ss_pred eeEEEECCCCCCHHHHHHHHHHHHC
Confidence 4778899999999999999998886
No 125
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=91.12 E-value=0.082 Score=40.68 Aligned_cols=24 Identities=17% Similarity=-0.056 Sum_probs=21.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+.++.+|+|||||.++-.++.+++
T Consensus 2 ~I~i~G~pGSGKsT~~~~La~~~~ 25 (179)
T d1e4va1 2 RIILLGAPVAGKGTQAQFIMEKYG 25 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 467899999999999988888876
No 126
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.11 E-value=0.11 Score=41.28 Aligned_cols=35 Identities=17% Similarity=0.191 Sum_probs=25.5
Q ss_pred HHHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 33 SLSKMFGNG--RARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 33 ai~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.++.++.++ ...-+++.+|+|+|||..++.++.+.
T Consensus 11 ~LD~ll~GGi~~G~v~~i~G~~GsGKT~l~l~la~~~ 47 (242)
T d1n0wa_ 11 ELDKLLQGGIETGSITEMFGEFRTGKTQICHTLAVTC 47 (242)
T ss_dssp HHHHHTTTSEETTSEEEEECCTTSSHHHHHHHHHHHT
T ss_pred HHHHhhcCCCcCCEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 456666543 23467788999999999988887654
No 127
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=90.85 E-value=0.26 Score=40.69 Aligned_cols=44 Identities=18% Similarity=0.077 Sum_probs=30.2
Q ss_pred cceEEEcCCCCCHHHHHHHHHH----hcCCceEEEEcChhhHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAAC----RIKKSCLCLATNAVSVDQWAFQF 88 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~----~~~~~~lil~P~~~l~~q~~~~~ 88 (411)
.-+++.|+||+|||..++.++. ..+.++++++.--. ..+...++
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a~~~g~~v~~~s~E~~-~~~~~~r~ 83 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAMLEES-VEETAEDL 83 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEESSSC-HHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhhhhcccceeEeeeccc-hhhHHhHH
Confidence 3567889999999988766653 33678999986544 34444333
No 128
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=90.82 E-value=0.11 Score=41.30 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=23.3
Q ss_pred cceEEEcC-CCCCHHHHHHHHH---HhcCCceEEE
Q 015196 44 RSGIIVLP-CGAGKSLVGVSAA---CRIKKSCLCL 74 (411)
Q Consensus 44 ~~~ll~~~-tG~GKT~~a~~~~---~~~~~~~lil 74 (411)
++.+|.+. ||.|||.+++.++ ++.+.+++++
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i 36 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence 35677766 7999999987775 4556788876
No 129
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.70 E-value=0.28 Score=39.68 Aligned_cols=59 Identities=10% Similarity=0.061 Sum_probs=39.0
Q ss_pred HHHHHHhCC-C-CcceEEEcCCCCCHHHHHHHHHHhc---------CCceEEEEcChhhHHHHHHHHHHH
Q 015196 33 SLSKMFGNG-R-ARSGIIVLPCGAGKSLVGVSAACRI---------KKSCLCLATNAVSVDQWAFQFKLW 91 (411)
Q Consensus 33 ai~~~~~~~-~-~~~~ll~~~tG~GKT~~a~~~~~~~---------~~~~lil~P~~~l~~q~~~~~~~~ 91 (411)
.++.++.++ + ..-+++.+++|+|||..++..+... ...++++.....+...+...+...
T Consensus 25 ~LD~~lgGGip~G~~~~i~G~~GsGKT~lalq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (258)
T d1v5wa_ 25 EFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGYPGGKIIFIDTENTFRPDRLRDIADR 94 (258)
T ss_dssp HHHHHTTSSBCSSEEEEEECCTTCTHHHHHHHHHHHTTSCBTTTBCCCEEEEEESSSCCCHHHHHHHHHH
T ss_pred HHHHhhcCCCcCCEEEEEECCCCCCHHHHHHHHHHHHHhhhhcccccceEEEechHHHHHHHHHHHHHhh
Confidence 456666653 2 2356778999999999999887532 135777776666666666655543
No 130
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=90.65 E-value=0.091 Score=40.88 Aligned_cols=24 Identities=25% Similarity=0.282 Sum_probs=21.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+.++.+|+|||||.++-.++.+++
T Consensus 5 riil~G~pGSGKsT~a~~La~~~g 28 (190)
T d1ak2a1 5 RAVLLGPPGAGKGTQAPKLAKNFC 28 (190)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 677889999999999998888875
No 131
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.56 E-value=0.096 Score=40.86 Aligned_cols=24 Identities=17% Similarity=0.058 Sum_probs=21.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
..++.+|+|||||.+|-.++.+++
T Consensus 3 iI~i~GppGSGKsT~a~~La~~~g 26 (194)
T d1teva_ 3 VVFVLGGPGAGKGTQCARIVEKYG 26 (194)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHC
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 568899999999999998888886
No 132
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.21 E-value=0.12 Score=40.13 Aligned_cols=27 Identities=30% Similarity=0.279 Sum_probs=22.2
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
+..+|.+|+|+|||.++-.++.+....
T Consensus 2 rpIvl~GpsG~GK~tl~~~L~~~~~~~ 28 (186)
T d1gkya_ 2 RPIVISGPSGTGKSTLLKKLFAEYPDS 28 (186)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHCTTT
T ss_pred CeEEEECCCCCCHHHHHHHHHHhCCcc
Confidence 478999999999999988877776543
No 133
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.92 E-value=0.12 Score=40.39 Aligned_cols=24 Identities=17% Similarity=-0.010 Sum_probs=21.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
..++.+|+|||||.+|-.++.+++
T Consensus 10 iI~i~GppGSGKsT~a~~La~~~g 33 (196)
T d1ukza_ 10 VIFVLGGPGAGKGTQCEKLVKDYS 33 (196)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHhC
Confidence 567789999999999999988885
No 134
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=89.82 E-value=0.23 Score=39.65 Aligned_cols=56 Identities=13% Similarity=0.192 Sum_probs=34.3
Q ss_pred HHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHH----hcCCceEEEEcChhhHHHHHHHHHH
Q 015196 34 LSKMFGNG--RARSGIIVLPCGAGKSLVGVSAAC----RIKKSCLCLATNAVSVDQWAFQFKL 90 (411)
Q Consensus 34 i~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~----~~~~~~lil~P~~~l~~q~~~~~~~ 90 (411)
++.++.++ ...-.++.+++|+|||..++.++. ..+.+++++...-. .......+..
T Consensus 15 LD~~l~GGi~~G~~~~I~G~~G~GKT~la~~~~~~~~~~~~~~~~~~s~e~~-~~~~~~~~~~ 76 (242)
T d1tf7a1 15 FDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEET-PQDIIKNARS 76 (242)
T ss_dssp HHHHTTSSEETTSEEEEEESTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSC-HHHHHHHHGG
T ss_pred HHHhhcCCCcCCeEEEEEeCCCCCHHHHHHHHHHHHHHhcCCCcccccccCC-HHHHHHHHHH
Confidence 45555432 334677889999999999876543 33457888775433 3334444433
No 135
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=89.80 E-value=0.17 Score=45.11 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=27.5
Q ss_pred cceEEEcCCCCCHHHHHHHHH---HhcCCceEEEEcChhh
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA---CRIKKSCLCLATNAVS 80 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~P~~~l 80 (411)
+++++.++||+|||..+..++ ...+..++|+=|..++
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~~~~~g~~~iiiD~kge~ 90 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDM 90 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHHHHHTTCEEEEEEETTHH
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHhCCCCEEEEeCChhH
Confidence 579999999999998754444 3345678888787654
No 136
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=89.37 E-value=0.17 Score=39.40 Aligned_cols=35 Identities=23% Similarity=0.336 Sum_probs=23.7
Q ss_pred HHHHHHhCCCCcce-EEEcCCCCCHHHHHHHHHHhc
Q 015196 33 SLSKMFGNGRARSG-IIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 33 ai~~~~~~~~~~~~-ll~~~tG~GKT~~a~~~~~~~ 67 (411)
++..++.+.+.+++ ++.+|+++|||+.+..++.-+
T Consensus 42 ~l~~~l~~~PKkn~i~~~GP~~TGKS~f~~sl~~~l 77 (205)
T d1tuea_ 42 ALKSFLKGTPKKNCLVFCGPANTGKSYFGMSFIHFI 77 (205)
T ss_dssp HHHHHHHTCTTCSEEEEESCGGGCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCceEEEEECCCCccHHHHHHHHHHHh
Confidence 34445555444455 457999999999987776544
No 137
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=89.14 E-value=0.15 Score=39.69 Aligned_cols=28 Identities=21% Similarity=0.077 Sum_probs=22.2
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCL 72 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~l 72 (411)
..+|.+|+|+|||.++-.++........
T Consensus 2 pIvl~GPsGsGK~tl~~~L~~~~~~~~~ 29 (190)
T d1lvga_ 2 PVVLSGPSGAGKSTLLKKLFQEHSSIFG 29 (190)
T ss_dssp CEEEECCTTSSHHHHHHHHHHHHTTTEE
T ss_pred eEEEECCCCCCHHHHHHHHHHhCCCcee
Confidence 5789999999999998777777654433
No 138
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=89.03 E-value=0.12 Score=39.44 Aligned_cols=23 Identities=9% Similarity=0.092 Sum_probs=19.0
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
.++.+++|+|||.+|-.++.+++
T Consensus 9 I~l~G~~GsGKTTia~~La~~L~ 31 (183)
T d1m8pa3 9 IFLTGYMNSGKDAIARALQVTLN 31 (183)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHh
Confidence 45779999999999988877664
No 139
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=88.75 E-value=0.18 Score=39.28 Aligned_cols=31 Identities=19% Similarity=0.093 Sum_probs=23.9
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
.-.++.+|+|||||..+-.++.+.+ +..++.
T Consensus 9 ~iI~l~G~pGSGKsT~a~~La~~~g--~~~is~ 39 (194)
T d3adka_ 9 KIIFVVGGPGSGKGTQCEKIVQKYG--YTHLST 39 (194)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHTC--CEEEEH
T ss_pred cEEEEECCCCCCHHHHHHHHHHHhC--CeeEec
Confidence 3677899999999999988888775 344444
No 140
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=88.17 E-value=0.28 Score=37.87 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=16.9
Q ss_pred EEcCCCCCHHHHHHHHHHhcC
Q 015196 48 IVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 48 l~~~tG~GKT~~a~~~~~~~~ 68 (411)
|.+|+|||||.+|-.+...++
T Consensus 27 I~G~~GSGKSTla~~L~~~l~ 47 (198)
T d1rz3a_ 27 IDGLSRSGKTTLANQLSQTLR 47 (198)
T ss_dssp EEECTTSSHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHhc
Confidence 679999999999877765543
No 141
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.02 E-value=0.24 Score=37.70 Aligned_cols=26 Identities=23% Similarity=0.011 Sum_probs=18.9
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+.-.++++++|||||..|-..+...+
T Consensus 14 p~liil~G~pGsGKST~a~~l~~~~~ 39 (172)
T d1yj5a2 14 PEVVVAVGFPGAGKSTFIQEHLVSAG 39 (172)
T ss_dssp CCEEEEECCTTSSHHHHHHHHTGGGT
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhcC
Confidence 34567789999999988766554433
No 142
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=86.65 E-value=0.2 Score=38.09 Aligned_cols=24 Identities=25% Similarity=0.167 Sum_probs=19.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+.++.+|+|+|||..+-.++..+.
T Consensus 2 ki~I~G~~G~GKSTLl~~i~~~l~ 25 (178)
T d1ye8a1 2 KIIITGEPGVGKTTLVKKIVERLG 25 (178)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHG
T ss_pred EEEEECCCCcHHHHHHHHHHhcCC
Confidence 478999999999998777665554
No 143
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=86.21 E-value=0.33 Score=39.01 Aligned_cols=34 Identities=18% Similarity=0.300 Sum_probs=24.2
Q ss_pred HHHHHhCC--CCcceEEEcCCCCCHHHHHHHHHHhc
Q 015196 34 LSKMFGNG--RARSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 34 i~~~~~~~--~~~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
++.++.++ ...-++|.+++|+|||..++.++.+.
T Consensus 23 LD~ll~GGl~~G~l~~i~G~~G~GKT~~~l~~a~~~ 58 (258)
T d2i1qa2 23 LDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNL 58 (258)
T ss_dssp HHHHTTSSEETTEEEEEEESTTSSHHHHHHHHHHHT
T ss_pred HHHhcCCCccCCeEEEEEeCCCCCHHHHHHHHHHHH
Confidence 45555542 22456788999999999998887644
No 144
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=85.55 E-value=0.8 Score=37.43 Aligned_cols=47 Identities=23% Similarity=0.389 Sum_probs=31.5
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc-------------CCceEEEEcChhhHHHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI-------------KKSCLCLATNAVSVDQWAFQFKLW 91 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~-------------~~~~lil~P~~~l~~q~~~~~~~~ 91 (411)
.-++|.+++|+|||..++.++... ..+++++.--- -..++..++...
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ia~g~~~~~~~~~~~~~vl~~~~E~-~~~~~~~Rl~~~ 89 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAED-PPTAIHHRLHAL 89 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHTCCCTTCCCCCCCCCEEEEESSS-CHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHcCCCcccccccCCCceEEEeccc-hHHHHHHHHHHH
Confidence 367889999999999987765432 23677776433 355556666554
No 145
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=85.30 E-value=0.45 Score=35.53 Aligned_cols=33 Identities=9% Similarity=-0.118 Sum_probs=24.5
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRI---KKSCLCLATN 77 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P~ 77 (411)
-..+.++.|||||..+-.++.++ +.++.++...
T Consensus 4 vi~itG~~GSGKTTL~~~L~~~l~~~g~~v~v~~~d 39 (170)
T d1np6a_ 4 LLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT 39 (170)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEeccc
Confidence 45678999999999988887654 4566666543
No 146
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=85.26 E-value=0.28 Score=37.43 Aligned_cols=31 Identities=10% Similarity=0.055 Sum_probs=22.9
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC---CceEEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK---KSCLCLA 75 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~---~~~lil~ 75 (411)
-.++.+++|+|||.++-.+..+++ .++.++.
T Consensus 3 iI~i~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~ 36 (190)
T d1khta_ 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVS 36 (190)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHcCCCeEEEe
Confidence 567889999999999877766553 3555554
No 147
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=85.18 E-value=0.43 Score=38.99 Aligned_cols=48 Identities=17% Similarity=0.066 Sum_probs=32.8
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEE
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLA 75 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~ 75 (411)
|-=|....+-+.. . ..+.++|.+|.|+|||..+..++...+....++.
T Consensus 14 f~GR~~el~~l~~---~-~~~~i~i~G~~G~GKTsLl~~~~~~~~~~~~~i~ 61 (283)
T d2fnaa2 14 FFDREKEIEKLKG---L-RAPITLVLGLRRTGKSSIIKIGINELNLPYIYLD 61 (283)
T ss_dssp SCCCHHHHHHHHH---T-CSSEEEEEESTTSSHHHHHHHHHHHHTCCEEEEE
T ss_pred CCChHHHHHHHHh---c-cCCEEEEEcCCCCcHHHHHHHHHHHCCCCeEEEE
Confidence 4445555444433 2 2347788999999999998888877776666654
No 148
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=84.93 E-value=0.33 Score=38.43 Aligned_cols=23 Identities=30% Similarity=0.154 Sum_probs=20.1
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
..+.+|+|||||.+|-.++.+++
T Consensus 6 IaIdGp~GsGKgT~ak~La~~lg 28 (223)
T d1q3ta_ 6 IAIDGPASSGKSTVAKIIAKDFG 28 (223)
T ss_dssp EEEECSSCSSHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHhC
Confidence 34569999999999999999886
No 149
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=84.82 E-value=0.17 Score=43.29 Aligned_cols=24 Identities=21% Similarity=0.153 Sum_probs=19.7
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
++.++.+|+|+|||.+|=.+..-+
T Consensus 29 h~vLl~G~pG~GKT~lar~~~~iL 52 (333)
T d1g8pa_ 29 GGVLVFGDRGTGKSTAVRALAALL 52 (333)
T ss_dssp CCEEEECCGGGCTTHHHHHHHHHS
T ss_pred CeEEEECCCCccHHHHHHHHHHhC
Confidence 379999999999999976665544
No 150
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=84.78 E-value=0.33 Score=38.33 Aligned_cols=40 Identities=23% Similarity=0.136 Sum_probs=27.3
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHH
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQF 88 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~ 88 (411)
..+.+|+|||||.+|-.++.+++ +..++ +-.|..+.....
T Consensus 6 I~I~GppGSGKgT~ak~La~~~g--l~~iS-tGdLlR~~a~~~ 45 (225)
T d1ckea_ 6 ITIDGPSGAGKGTLCKAMAEALQ--WHLLD-SGAIYRVLALAA 45 (225)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHT--CEEEE-HHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHhC--CcEEC-HHHHHHHHHHHH
Confidence 44569999999999999999886 33343 345555544333
No 151
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.46 E-value=0.15 Score=39.46 Aligned_cols=23 Identities=22% Similarity=0.172 Sum_probs=18.4
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
.++.+++|||||.+|-.+..+++
T Consensus 22 I~L~G~pGSGKTTiAk~La~~l~ 44 (195)
T d1x6va3 22 VWLTGLSGAGKTTVSMALEEYLV 44 (195)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 34679999999999888876653
No 152
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=82.43 E-value=0.37 Score=36.83 Aligned_cols=31 Identities=23% Similarity=0.133 Sum_probs=23.1
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC---CceEEEEc
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK---KSCLCLAT 76 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~---~~~lil~P 76 (411)
.++.+++|+|||.++-.+...++ ..+..+.+
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~ 37 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQGINNKIINY 37 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 46789999999999877776653 35666654
No 153
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=82.29 E-value=0.33 Score=36.17 Aligned_cols=38 Identities=16% Similarity=0.016 Sum_probs=29.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVD 82 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~ 82 (411)
-.++.++-|+|||..+-.++..++..--|-+||-.|++
T Consensus 35 ii~L~G~LGaGKTtfvr~~~~~lg~~~~V~SPTF~l~~ 72 (158)
T d1htwa_ 35 MVYLNGDLGAGKTTLTRGMLQGIGHQGNVKSPTYTLVE 72 (158)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHTTCCSCCCCCTTTCEE
T ss_pred EEEEecCCCccHHHHHHHHHhhcccccccCCCceEEEE
Confidence 35678999999999988888888765556788776543
No 154
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.41 E-value=0.5 Score=37.12 Aligned_cols=22 Identities=18% Similarity=0.012 Sum_probs=17.8
Q ss_pred EEEcCCCCCHHHHHHHHHHhcC
Q 015196 47 IIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
-+.+++|||||.+|-.+...++
T Consensus 6 gI~G~~gSGKSTla~~L~~~l~ 27 (213)
T d1uj2a_ 6 GVSGGTASGKSSVCAKIVQLLG 27 (213)
T ss_dssp EEECSTTSSHHHHHHHHHHHTT
T ss_pred EEECCCCCCHHHHHHHHHHHhc
Confidence 3679999999999877766654
No 155
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.05 E-value=0.57 Score=35.73 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=19.9
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+..+|.+|+|+|||.++-.++.+..
T Consensus 4 k~ivl~Gpsg~GK~tl~~~L~~~~~ 28 (178)
T d1kgda_ 4 KTLVLLGAHGVGRRHIKNTLITKHP 28 (178)
T ss_dssp CEEEEECCTTSSHHHHHHHHHHHCT
T ss_pred CcEEEECCCCCCHHHHHHHHHHhCC
Confidence 4678899999999999777665543
No 156
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.98 E-value=1.8 Score=35.65 Aligned_cols=22 Identities=23% Similarity=0.247 Sum_probs=15.9
Q ss_pred cceE--EEcCCCCCHHHHHHHHHH
Q 015196 44 RSGI--IVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 44 ~~~l--l~~~tG~GKT~~a~~~~~ 65 (411)
.+.+ |.+++|||||.++..++.
T Consensus 26 ~P~iIGi~G~qGSGKSTl~~~l~~ 49 (286)
T d1odfa_ 26 CPLFIFFSGPQGSGKSFTSIQIYN 49 (286)
T ss_dssp SCEEEEEECCTTSSHHHHHHHHHH
T ss_pred CCEEEEeECCCCCCHHHHHHHHHH
Confidence 4444 469999999988765543
No 157
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=80.76 E-value=0.48 Score=36.93 Aligned_cols=30 Identities=10% Similarity=-0.002 Sum_probs=22.6
Q ss_pred eEEEcCCCCCHHHHHHHHHHhc---CCceEEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAACRI---KKSCLCLA 75 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~ 75 (411)
.++++.+|+|||.+|-.++..+ +.++.++.
T Consensus 5 i~l~GlpgsGKSTla~~L~~~l~~~~~~~~~~~ 37 (213)
T d1bifa1 5 IVMVGLPARGKTYISKKLTRYLNFIGVPTREFN 37 (213)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCCCeEEc
Confidence 5678999999999988877654 34566664
No 158
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=80.26 E-value=0.52 Score=40.08 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=25.6
Q ss_pred CCCChhHHHHHHHH--------HhCCCCcceEEEcCCCCCHHHHHHHH
Q 015196 24 AQPRPYQEKSLSKM--------FGNGRARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~--------~~~~~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
|.+-.-|.+.++.. +.++.....+..+.||+|||+++...
T Consensus 58 f~~~~~q~~vy~~~~~plv~~~~~~G~n~~i~aYGqTGSGKTyTm~G~ 105 (330)
T d1ry6a_ 58 FDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGS 105 (330)
T ss_dssp ECTTCCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHHBS
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEEeeeccccccceeeecc
Confidence 34556688887654 22222223455699999999998753
No 159
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.25 E-value=0.76 Score=38.84 Aligned_cols=39 Identities=15% Similarity=0.025 Sum_probs=25.7
Q ss_pred CCChhHHHHHHHHH-------hCCCCcceEEEcCCCCCHHHHHHHH
Q 015196 25 QPRPYQEKSLSKMF-------GNGRARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~-------~~~~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
..-.-|.+.++.+. -.+.....+..++||+|||+++...
T Consensus 51 ~~~~~q~~vf~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyT~~G~ 96 (323)
T d1bg2a_ 51 QSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGK 96 (323)
T ss_dssp CTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBS
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCCcceeeecccCCCCceeccCC
Confidence 44556887776642 1223345566799999999998653
No 160
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=78.98 E-value=1.8 Score=33.65 Aligned_cols=31 Identities=16% Similarity=0.155 Sum_probs=21.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhc----CCceEEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRI----KKSCLCLA 75 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~----~~~~lil~ 75 (411)
-..+.+.+|+|||.+|-.+..++ +..++++-
T Consensus 26 vIwltGlsGsGKTTia~~L~~~l~~~~~~~~~~ld 60 (208)
T d1m7ga_ 26 TIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLD 60 (208)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHhcCceEEEEc
Confidence 45567999999999987766544 33455443
No 161
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=78.61 E-value=0.64 Score=40.03 Aligned_cols=39 Identities=13% Similarity=0.022 Sum_probs=25.4
Q ss_pred CCCChhHHHHHHHH--------HhCCCCcceEEEcCCCCCHHHHHHHH
Q 015196 24 AQPRPYQEKSLSKM--------FGNGRARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~--------~~~~~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
|....-|.+.++.+ +.+ .....+..+.||+|||+++...
T Consensus 88 f~~~~~Q~~Vy~~~~~plv~~~l~G-~n~tifaYGqTGSGKTyTm~G~ 134 (362)
T d1v8ka_ 88 FDETASNEVVYRFTARPLVQTIFEG-GKATCFAYGQTGSGKTHTMGGD 134 (362)
T ss_dssp ECTTCCHHHHHHHTTHHHHHHHHTT-CEEEEEEEESTTSSHHHHHHCB
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhc-cCceEEeeccCCCCCceeeeec
Confidence 34455688887654 232 2234445699999999998764
No 162
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=76.94 E-value=1.1 Score=38.39 Aligned_cols=39 Identities=21% Similarity=0.105 Sum_probs=25.3
Q ss_pred CCChhHHHHHHHHHh-------CCCCcceEEEcCCCCCHHHHHHHH
Q 015196 25 QPRPYQEKSLSKMFG-------NGRARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~-------~~~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
..-.-|.+.++.+.. .+.....+..++||+|||+++...
T Consensus 55 ~~~~~q~~vy~~~~~plv~~~l~G~n~ti~aYG~tgSGKT~Tm~G~ 100 (354)
T d1goja_ 55 DMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGT 100 (354)
T ss_dssp CTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHHTBS
T ss_pred CCCCCHHHHHHHHHHHHHHHhhccCceeEEecccCCCCcceeeecc
Confidence 344558888775421 222234555699999999997653
No 163
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=76.84 E-value=1.6 Score=35.93 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=26.2
Q ss_pred CcceEEEcCCCCCHHHHHHHHH---HhcCCceEEEE
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAA---CRIKKSCLCLA 75 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~ 75 (411)
++-.++.+-=|+|||.+++.++ ++.+++++++-
T Consensus 8 p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD 43 (296)
T d1ihua1 8 PPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVS 43 (296)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEe
Confidence 4567778999999999987775 44578998887
No 164
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=76.61 E-value=0.94 Score=37.32 Aligned_cols=39 Identities=28% Similarity=0.342 Sum_probs=28.4
Q ss_pred hhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh
Q 015196 28 PYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 28 ~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
+.=.++++.++.-..-.+.++.++.|+|||.++..++..
T Consensus 28 ~~~~r~ID~l~PigrGQr~~I~g~~g~GKT~l~~~i~~~ 66 (289)
T d1xpua3 28 DLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQS 66 (289)
T ss_dssp HHHHHHHHHHSCCBTTCEEEEEECSSSSHHHHHHHHHHH
T ss_pred cccceeeeecccccCCCeeeEeCCCCCCHHHHHHHHHHH
Confidence 444577777753322358999999999999998777653
No 165
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.53 E-value=0.86 Score=34.66 Aligned_cols=24 Identities=29% Similarity=0.234 Sum_probs=18.5
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
-.++.+|+|+|||.++-.++.+..
T Consensus 4 iivl~GpsG~GK~tl~~~L~~~~~ 27 (182)
T d1znwa1 4 VVVLSGPSAVGKSTVVRCLRERIP 27 (182)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHST
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 467889999999998766665543
No 166
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=76.16 E-value=0.83 Score=34.63 Aligned_cols=23 Identities=17% Similarity=0.179 Sum_probs=19.6
Q ss_pred cceEEEcCCCCCHHHHHHHHHHh
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
..+++.++.|+|||.+|+.++.+
T Consensus 16 ~gvli~G~sG~GKS~lal~l~~~ 38 (177)
T d1knxa2 16 VGVLLTGRSGIGKSECALDLINK 38 (177)
T ss_dssp EEEEEEESSSSSHHHHHHHHHTT
T ss_pred EEEEEEcCCCCCHHHHHHHHHHc
Confidence 46788999999999999888764
No 167
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=75.80 E-value=1 Score=38.49 Aligned_cols=33 Identities=21% Similarity=0.173 Sum_probs=22.5
Q ss_pred hHHHHHHHH--------HhCCCCcceEEEcCCCCCHHHHHHH
Q 015196 29 YQEKSLSKM--------FGNGRARSGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 29 ~Q~~ai~~~--------~~~~~~~~~ll~~~tG~GKT~~a~~ 62 (411)
-|.+.++.+ +.+ .....+..+.||+|||+++..
T Consensus 66 sQ~~vy~~~~~plv~~~l~G-~n~ti~aYGqTgSGKT~Tm~G 106 (349)
T d2zfia1 66 SQKQVYRDIGEEMLQHAFEG-YNVCIFAYGQTGAGKSYTMMG 106 (349)
T ss_dssp CHHHHHHHTHHHHHHHHHTT-CCEEEEEECSTTSSHHHHHTB
T ss_pred cHHHHHHHhhHHHHHHHHhc-cCceeeeeccCCCCCceeecc
Confidence 477777653 333 233455679999999999765
No 168
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=75.76 E-value=0.6 Score=36.03 Aligned_cols=32 Identities=19% Similarity=0.104 Sum_probs=22.5
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
-..+.|+.|+|||..+-.+..+++...++.-|
T Consensus 11 ~I~ieG~~GsGKTTl~~~L~~~l~~~~~~~ep 42 (197)
T d2vp4a1 11 TVLIEGNIGSGKTTYLNHFEKYKNDICLLTEP 42 (197)
T ss_dssp EEEEECSTTSCHHHHHHTTGGGTTTEEEECCT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhCCcEEEEEe
Confidence 35677999999999877766666654444334
No 169
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=75.40 E-value=1.3 Score=32.91 Aligned_cols=30 Identities=10% Similarity=-0.177 Sum_probs=22.1
Q ss_pred eEEEcCCCCCHHHHHHHHHHhc---CCceEEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAACRI---KKSCLCLA 75 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~ 75 (411)
.-+.++.|||||.....++.++ +.++-++.
T Consensus 4 i~I~G~~gSGKTTli~~l~~~L~~~g~~v~vik 36 (165)
T d1xjca_ 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVK 36 (165)
T ss_dssp EEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEEE
Confidence 3488999999999987776544 44666664
No 170
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=75.30 E-value=1 Score=38.43 Aligned_cols=38 Identities=13% Similarity=0.027 Sum_probs=24.0
Q ss_pred CCChhHHHHHHHHHh-------CCCCcceEEEcCCCCCHHHHHHH
Q 015196 25 QPRPYQEKSLSKMFG-------NGRARSGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~-------~~~~~~~ll~~~tG~GKT~~a~~ 62 (411)
....-|.+.++.+.. .+.....+..++||+|||+++..
T Consensus 56 ~~~~~q~~vy~~~~~~lv~~~l~G~n~~i~aYGqtgSGKTyTm~G 100 (345)
T d1x88a1 56 GASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEG 100 (345)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHHTB
T ss_pred CCCCCHHHHHHHHHHHhHHHHhccCCceEEeeeeccccceEEeee
Confidence 344557777765421 12223445579999999999764
No 171
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=74.79 E-value=1.1 Score=33.91 Aligned_cols=23 Identities=26% Similarity=0.238 Sum_probs=19.6
Q ss_pred cceEEEcCCCCCHHHHHHHHHHh
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
...++.++.|+|||.+|+.++.+
T Consensus 15 ~gvl~~G~sG~GKStlal~l~~~ 37 (176)
T d1kkma_ 15 LGVLITGDSGVGKSETALELVQR 37 (176)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46788999999999999887764
No 172
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=74.76 E-value=1.3 Score=37.64 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=24.7
Q ss_pred CCChhHHHHHHHH---Hh---CCCCcceEEEcCCCCCHHHHHHH
Q 015196 25 QPRPYQEKSLSKM---FG---NGRARSGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 25 ~l~~~Q~~ai~~~---~~---~~~~~~~ll~~~tG~GKT~~a~~ 62 (411)
..-.-|.+.++.+ +. .+.....+..+.||+|||+++..
T Consensus 59 ~~~~~q~~vy~~v~~~v~~~l~G~n~~i~aYGqtgSGKT~T~~G 102 (342)
T d1f9va_ 59 DQQDTNVDVFKEVGQLVQSSLDGYNVCIFAYGQTGSGKTFTMLN 102 (342)
T ss_dssp CTTCCHHHHHHHHHHHHGGGGGTCCEEEEEECCTTSSHHHHHHS
T ss_pred CCCCCHHHHHHHhhhhhcchhcccccceeeeeccCCcccccccc
Confidence 3455588888754 21 12223445579999999999865
No 173
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=73.31 E-value=1.2 Score=38.18 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=23.8
Q ss_pred CCChhHHHHHHHH-------HhCCCCcceEEEcCCCCCHHHHHHHH
Q 015196 25 QPRPYQEKSLSKM-------FGNGRARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 25 ~l~~~Q~~ai~~~-------~~~~~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
....-|.+.++.+ +.+. ....+..++||+|||+++...
T Consensus 51 ~~~~~q~~vy~~v~~lv~~~l~G~-n~~i~aYGqTGSGKTyTm~G~ 95 (364)
T d1sdma_ 51 DGNATQDDVFEDTKYLVQSAVDGY-NVCIFAYGQTGSGKTFTIYGA 95 (364)
T ss_dssp CTTCCHHHHHHTTTHHHHHHHTTC-EEEEEEECSTTSSHHHHHTBC
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCC-ceeeeccccCCCCcccccccC
Confidence 3445577776543 3332 234455699999999998653
No 174
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=72.79 E-value=1.3 Score=33.30 Aligned_cols=23 Identities=26% Similarity=0.209 Sum_probs=19.6
Q ss_pred cceEEEcCCCCCHHHHHHHHHHh
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
..+++.++.|+|||.+++.++.+
T Consensus 16 ~gvli~G~sg~GKS~la~~l~~~ 38 (169)
T d1ko7a2 16 VGVLITGDSGIGKSETALELIKR 38 (169)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCHHHHHHHHHHc
Confidence 46788999999999998887765
No 175
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=72.24 E-value=3.1 Score=33.72 Aligned_cols=33 Identities=12% Similarity=0.081 Sum_probs=24.2
Q ss_pred CcceEEEcCCCCCHHHHHHHHH---HhcCCceEEEE
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAA---CRIKKSCLCLA 75 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~ 75 (411)
++-.++.+-=|+|||.+++.++ ++.+++++++=
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD 55 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTT 55 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 3455667999999999987764 34567877775
No 176
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=71.36 E-value=1.5 Score=37.59 Aligned_cols=37 Identities=14% Similarity=0.082 Sum_probs=23.0
Q ss_pred CCChhHHHHHH-------HHHhCCCCcceEEEcCCCCCHHHHHHH
Q 015196 25 QPRPYQEKSLS-------KMFGNGRARSGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 25 ~l~~~Q~~ai~-------~~~~~~~~~~~ll~~~tG~GKT~~a~~ 62 (411)
....-|.+.++ .++.+ .....+..++||+|||+++..
T Consensus 101 ~~~~~Q~~Vy~~v~plv~~vl~G-~n~ti~aYGqtGSGKT~Tm~G 144 (368)
T d2ncda_ 101 HPLSSQSDIFEMVSPLIQSALDG-YNICIFAYGQTGSGKTYTMDG 144 (368)
T ss_dssp CTTCCHHHHHTTTHHHHHHHHTT-CEEEEEEECSTTSSHHHHHTE
T ss_pred CCCCCccchHHHHHHHHHHHhcc-cceeEEeeccCCCccceEecc
Confidence 34445776664 33433 223445569999999999754
No 177
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=70.71 E-value=1.7 Score=34.45 Aligned_cols=31 Identities=16% Similarity=-0.077 Sum_probs=24.5
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHhcCCceEE
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACRIKKSCLC 73 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~~~~~~li 73 (411)
|+-.++.|+.|||||..+-.+..++....+.
T Consensus 2 pk~IviEG~~GsGKST~~~~L~~~l~~~~i~ 32 (241)
T d2ocpa1 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVA 32 (241)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHCTTSEEE
T ss_pred CeEEEEECCCCCcHHHHHHHHHHHHhhcCCc
Confidence 3567788999999999988888887765543
No 178
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=70.68 E-value=1.9 Score=33.46 Aligned_cols=24 Identities=29% Similarity=0.202 Sum_probs=19.1
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
-.+|.+|+|+|||.+.-.++....
T Consensus 4 livi~GPSG~GK~tl~~~L~~~~p 27 (205)
T d1s96a_ 4 LYIVSAPSGAGKSSLIQALLKTQP 27 (205)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHSC
T ss_pred EEEEECCCCCCHHHHHHHHHhhCC
Confidence 457789999999999877766543
No 179
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=68.99 E-value=6.6 Score=32.42 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=47.4
Q ss_pred HHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchh---------------------hhhcCCC
Q 015196 56 KSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSK---------------------ERFRGNA 114 (411)
Q Consensus 56 KT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~---------------------~~~~~~~ 114 (411)
|.++...++.+..+++|+|+|+...+.++.+++..|.+ ..+..+.+... ....++.
T Consensus 2 ~a~~~a~~~~~~~~p~lvv~~~~~~A~~l~~~L~~~~~---~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~~~ 78 (308)
T d2b2na1 2 CATLVAEIAERHAGPVVLIAPDMQNALRLHDEISQFTD---QMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQR 78 (308)
T ss_dssp HHHHHHHHHHHCSSCEEEEESSHHHHHHHHHHHHTTCS---SCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGCCS
T ss_pred hHHHHHHHHHhhCCCEEEEcCCHHHHHHHHHHHHhcCC---CceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhcCC
Confidence 44555566677788999999999999999999987653 23444432111 1123456
Q ss_pred cEEEEecceecccC
Q 015196 115 GVVVTTYNMVAFGG 128 (411)
Q Consensus 115 ~I~v~t~~~l~~~~ 128 (411)
.|+|+|...+....
T Consensus 79 ~iiits~~al~~~~ 92 (308)
T d2b2na1 79 GVLIVPVNTLMQRV 92 (308)
T ss_dssp SEEEEEHHHHTBCC
T ss_pred ceEEeechhhhhhc
Confidence 78999988776643
No 180
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=68.91 E-value=2 Score=40.24 Aligned_cols=35 Identities=20% Similarity=0.111 Sum_probs=26.5
Q ss_pred HHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh
Q 015196 32 KSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 32 ~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
.|+..+.........++.+.+|+|||..+=.++..
T Consensus 75 ~Ay~~l~~~~~~QsIiisGeSGsGKTe~~k~il~y 109 (684)
T d1lkxa_ 75 DAYRSMRQSQENQCVIISGESGAGKTEASKKIMQF 109 (684)
T ss_dssp HHHHHHHHHCCCEEEEEECSTTSSHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEEEcCCCCCHHHHHHHHHHH
Confidence 67777766655568899999999999987555443
No 181
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=68.87 E-value=2 Score=40.42 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH
Q 015196 31 EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 31 ~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~ 64 (411)
..|+..++..+.....++.+..|+|||..+=.++
T Consensus 113 ~~Ay~~m~~~~~nQsIiisGeSGaGKTe~~k~il 146 (712)
T d1d0xa2 113 DVAYRSMLDDRQNQSLLITGESGAGKTENTKKVI 146 (712)
T ss_dssp HHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEeCCCCCCHHHHHHHHH
Confidence 4566777765555688999999999999865544
No 182
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=68.47 E-value=2 Score=40.40 Aligned_cols=36 Identities=17% Similarity=0.148 Sum_probs=26.5
Q ss_pred HHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH
Q 015196 30 QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 30 Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
=+.|+..+...+.....++.+..|+|||..+=.++.
T Consensus 78 A~~Ay~~m~~~~~~Q~IiisGeSGaGKTe~~k~il~ 113 (710)
T d1br2a2 78 ADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQ 113 (710)
T ss_dssp HHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 346677777655556889999999999998655443
No 183
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=68.30 E-value=2.1 Score=40.55 Aligned_cols=36 Identities=28% Similarity=0.299 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH
Q 015196 30 QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 30 Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
=..|+..+...+.....++.+..|+|||..+=.++.
T Consensus 81 A~~Ay~~l~~~~~~Q~IiisGeSGsGKTe~~k~il~ 116 (730)
T d1w7ja2 81 AEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR 116 (730)
T ss_dssp HHHHHHHHHHHTCCEEEEEECSTTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCeEEEEEeCCCCCHHHHHHHHHH
Confidence 356777776655556888999999999998655543
No 184
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=68.28 E-value=6.1 Score=31.89 Aligned_cols=42 Identities=14% Similarity=0.157 Sum_probs=25.2
Q ss_pred CCChhHHHHHHHHHhCC-CCcce-EEEcCCCCCHHHHHHHHHHhc
Q 015196 25 QPRPYQEKSLSKMFGNG-RARSG-IIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~-~~~~~-ll~~~tG~GKT~~a~~~~~~~ 67 (411)
.+..+.. ++..++.+. +.+++ ++.+|+++|||..+-.+..-+
T Consensus 85 ~~~~f~~-~l~~~L~~~~~k~n~~~l~G~~~tGKS~f~~~i~~~l 128 (267)
T d1u0ja_ 85 DPQYAAS-VFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTV 128 (267)
T ss_dssp CHHHHHH-HHHHHHTTCSTTCCEEEEECSTTSSHHHHHHHHHHHS
T ss_pred CHHHHHH-HHHHHHcCCCCccEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 3344443 555555432 33344 567999999999876655433
No 185
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=67.75 E-value=2.7 Score=34.93 Aligned_cols=21 Identities=19% Similarity=0.110 Sum_probs=16.5
Q ss_pred EEEcCCCCCHHHHHHHHHHhc
Q 015196 47 IIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~ 67 (411)
-|.|++|+|||.+|-.+...+
T Consensus 84 GIaG~sgSGKSTla~~L~~lL 104 (308)
T d1sq5a_ 84 SIAGSVAVGKSTTARVLQALL 104 (308)
T ss_dssp EEEECTTSSHHHHHHHHHHHH
T ss_pred EEeCCCCCCCcHHHHHHHHHH
Confidence 357999999999987765544
No 186
>d2eyqa2 c.37.1.19 (A:349-465) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=66.73 E-value=3.3 Score=28.67 Aligned_cols=74 Identities=9% Similarity=0.007 Sum_probs=46.7
Q ss_pred HHHHHHhhhcCCCeEEEEecChhHHHHHHHHhCCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeeccCccccCccCccEE
Q 015196 257 EFLIRFHEQQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKVGDNSIDIPEANVI 336 (411)
Q Consensus 257 ~~l~~~~~~~~~~~~ivf~~~~~~~~~l~~~l~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~~~~Gid~~~~~~v 336 (411)
..|.++.+ ..+.++|+.|++...++.+.+.|.-.-+....... ...|.++ . +-|+...+.+|+-+|+...+
T Consensus 24 ~~L~~~i~-~~~~~Vli~a~s~g~~erl~e~L~~~~i~~~~~~~-----~~~~~~~-~--~~i~~~~l~~GF~~~~~~l~ 94 (117)
T d2eyqa2 24 DALRKFLE-TFDGPVVFSVESEGRREALGELLARIKIAPQRIMR-----LDEASDR-G--RYLMIGAAEHGFVDTVRNLA 94 (117)
T ss_dssp HHHHHHHT-TCCSCCCEEESSHHHHHHHHHHHGGGTCCCEECSS-----GGGCCTT-C--CEEEECCCCSCEEETTTTEE
T ss_pred HHHHHHHH-hCCCeEEEEECCccHHHHHHHHHHHcCCCceEecC-----hhhhcCc-e--EEEEEecCccccccCCCCEE
Confidence 34444444 33557889999999999999998422111110000 1124444 3 55666788999999999988
Q ss_pred EEe
Q 015196 337 IQI 339 (411)
Q Consensus 337 i~~ 339 (411)
|+.
T Consensus 95 vIt 97 (117)
T d2eyqa2 95 LIC 97 (117)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 187
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=66.68 E-value=2.2 Score=40.75 Aligned_cols=34 Identities=21% Similarity=0.251 Sum_probs=25.7
Q ss_pred HHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH
Q 015196 31 EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 31 ~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~ 64 (411)
..|+..+.........++.+..|+|||..+=.++
T Consensus 111 ~~Ay~~m~~~~~~QsIiisGeSGaGKTe~~K~il 144 (794)
T d2mysa2 111 DNAYQFMLTDRENQSILITGESGAGKTVNTKRVI 144 (794)
T ss_dssp HHHHHHHHHHTCCEEEEEEECTTSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcEEEEEcCCCCCHHHHHHHHH
Confidence 3677777766555688999999999998864443
No 188
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=66.19 E-value=3.8 Score=33.30 Aligned_cols=36 Identities=11% Similarity=0.038 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHh
Q 015196 31 EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 31 ~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
.++++.++.-..-.+..+.++.|+|||.++..++..
T Consensus 56 IraID~l~pigkGQr~~If~~~g~GKt~l~~~i~~~ 91 (276)
T d2jdid3 56 IKVVDLLAPYAKGGKIGLFGGAGVGKTVLIMELINN 91 (276)
T ss_dssp CHHHHHHSCEETTCEEEEEECTTSSHHHHHHHHHHH
T ss_pred ceeeeeeccccCCCEEEeeCCCCCCHHHHHHHHHHH
Confidence 466777643222248999999999999998888755
No 189
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=64.16 E-value=2.6 Score=32.59 Aligned_cols=22 Identities=27% Similarity=0.228 Sum_probs=16.4
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCC
Q 015196 47 IIVLPCGAGKSLVGVSAACRIKK 69 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~~~ 69 (411)
-|.++.|||||.++- .+..++-
T Consensus 7 gitG~igSGKStv~~-~l~~~G~ 28 (208)
T d1vhta_ 7 ALTGGIGSGKSTVAN-AFADLGI 28 (208)
T ss_dssp EEECCTTSCHHHHHH-HHHHTTC
T ss_pred EEECCCcCCHHHHHH-HHHHCCC
Confidence 368999999999874 4456653
No 190
>d1c9ka_ c.37.1.11 (A:) Adenosylcobinamide kinase/adenosylcobinamide phosphate guanylyltransferase CobU {Salmonella typhimurium [TaxId: 90371]}
Probab=63.99 E-value=3.8 Score=30.93 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=31.3
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHh
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWS 92 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~ 92 (411)
.++.++.+|||+--|...+ ....++++++.....-..|..++..+-
T Consensus 2 iLVtGGarSGKS~~AE~l~-~~~~~~~YiAT~~~~D~em~~RI~~Hr 47 (180)
T d1c9ka_ 2 ILVTGGARSGKSRHAEALI-GDAPQVLYIATSQILDDEMAARIQHHK 47 (180)
T ss_dssp EEEEECTTSSHHHHHHHHH-CSCSSEEEEECCCC------CHHHHHH
T ss_pred EEEECCCCccHHHHHHHHH-hcCCCcEEEEccCCCCHHHHHHHHHHH
Confidence 4789999999999887765 345688999987776667777776653
No 191
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus [TaxId: 274]}
Probab=63.98 E-value=1.3 Score=33.73 Aligned_cols=23 Identities=26% Similarity=0.078 Sum_probs=16.4
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 47 IIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
-|.++.|||||.+|=.+ ...+-.
T Consensus 7 gitG~~gSGKstva~~l-~~~g~~ 29 (191)
T d1uf9a_ 7 GITGNIGSGKSTVAALL-RSWGYP 29 (191)
T ss_dssp EEEECTTSCHHHHHHHH-HHTTCC
T ss_pred EEECCCCCCHHHHHHHH-HHCCCe
Confidence 36799999999986544 555533
No 192
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=63.84 E-value=2.4 Score=40.47 Aligned_cols=34 Identities=21% Similarity=0.255 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHH
Q 015196 31 EKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 31 ~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~ 64 (411)
..|+..+...+....+++.+..|+|||..+=.++
T Consensus 109 ~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il 142 (789)
T d1kk8a2 109 DNAYQNMVTDRENQSCLITGESGAGKTENTKKVI 142 (789)
T ss_dssp HHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcEEEEEeCCCCCHHHHHHHHH
Confidence 4677777665555688999999999998864444
No 193
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=62.50 E-value=3.7 Score=32.27 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=19.9
Q ss_pred eEEEcCCCCCHHHHHHHHHHhc--CCceEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAACRI--KKSCLCL 74 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~--~~~~lil 74 (411)
.++.++.|+|||...-.+..++ ++.+.++
T Consensus 3 i~v~G~~GsGKTTLl~~ll~~~~~~~~~~iv 33 (244)
T d1yrba1 3 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAYV 33 (244)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHTTTSCEEEE
T ss_pred EEEEcCCCCcHHHHHHHHHHHHhhCCeEEEE
Confidence 4678999999998865555433 3455555
No 194
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=62.21 E-value=3.5 Score=32.28 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=19.6
Q ss_pred EcCCCCCHHHHHHHHH---HhcCCceEEE
Q 015196 49 VLPCGAGKSLVGVSAA---CRIKKSCLCL 74 (411)
Q Consensus 49 ~~~tG~GKT~~a~~~~---~~~~~~~lil 74 (411)
.+--|+|||.+++.++ ++.+++++++
T Consensus 9 ~~kGGvGKTtia~nLA~~la~~g~~Vlli 37 (237)
T d1g3qa_ 9 SGKGGTGKTTVTANLSVALGDRGRKVLAV 37 (237)
T ss_dssp CSSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCcHHHHHHHHHHHHHhCCCCEEEE
Confidence 3668999999987775 3456787777
No 195
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.89 E-value=4.5 Score=31.40 Aligned_cols=29 Identities=17% Similarity=0.067 Sum_probs=22.4
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcCCceEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIKKSCLCL 74 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~~~~lil 74 (411)
..+.++-|+|||..+-.+...+..++.++
T Consensus 6 I~iEG~DGsGKST~~~~L~~~L~~~~~~~ 34 (214)
T d1tmka_ 6 ILIEGLDRTGKTTQCNILYKKLQPNCKLL 34 (214)
T ss_dssp EEEEESTTSSHHHHHHHHHHHTTTSEEEE
T ss_pred EEEECCCCCcHHHHHHHHHHHHHhCCEEE
Confidence 45679999999999888888876554433
No 196
>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}
Probab=61.23 E-value=37 Score=27.08 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=61.5
Q ss_pred CCCCChhHHHHHHHHHhCC-CCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHH-HHHHHHhCCCCCcEE
Q 015196 23 HAQPRPYQEKSLSKMFGNG-RARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWA-FQFKLWSTIQDDQIC 100 (411)
Q Consensus 23 ~~~l~~~Q~~ai~~~~~~~-~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~-~~~~~~~~~~~~~v~ 100 (411)
-+.|||.=...+...+... ....-++-..|||| .+++.++......-++.+.-..-+-++. ....+ ++.. .+.
T Consensus 87 VlIPRpeTE~lv~~~l~~~~~~~~~vlDlGtGSG--~I~i~la~~~p~~~v~avDis~~Al~~A~~Na~~-~~~~--~v~ 161 (274)
T d2b3ta1 87 TLIPRPDTECLVEQALARLPEQPCRILDLGTGTG--AIALALASERPDCEIIAVDRMPDAVSLAQRNAQH-LAIK--NIH 161 (274)
T ss_dssp SCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTS--HHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHH-HTCC--SEE
T ss_pred ccccccchhhhhhhHhhhhcccccceeeeehhhh--HHHHHHHhhCCcceeeeccchhHHHhHHHHHHHH-hCcc--cce
Confidence 3678998888887665432 11233667888888 4555566666656666665544444443 33444 3442 477
Q ss_pred EEcCchhhhhc-CCCcEEEEecceecc
Q 015196 101 RFTSDSKERFR-GNAGVVVTTYNMVAF 126 (411)
Q Consensus 101 ~~~~~~~~~~~-~~~~I~v~t~~~l~~ 126 (411)
.+.++..+.+. ...+++|+++.-+..
T Consensus 162 ~~~~d~~~~~~~~~fDlIvsNPPYi~~ 188 (274)
T d2b3ta1 162 ILQSDWFSALAGQQFAMIVSNPPYIDE 188 (274)
T ss_dssp EECCSTTGGGTTCCEEEEEECCCCBCT
T ss_pred eeecccccccCCCceeEEEecchhhhh
Confidence 77777665554 468999999986643
No 197
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.20 E-value=1.7 Score=34.31 Aligned_cols=33 Identities=15% Similarity=-0.135 Sum_probs=25.1
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcCCceEEEEc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIKKSCLCLAT 76 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P 76 (411)
+...+.|+-|+|||..+-.+..++.+.-+...|
T Consensus 3 k~I~ieG~dGsGKST~~~~L~~~l~~~~~~~e~ 35 (241)
T d1p5zb_ 3 KKISIEGNIAAGKSTFVNILKQLCEDWEVVPEP 35 (241)
T ss_dssp EEEEEECSTTSSHHHHHTTTGGGCTTEEEECCC
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhcCCCeeee
Confidence 356788999999999988877777655554444
No 198
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=57.88 E-value=5.3 Score=31.02 Aligned_cols=28 Identities=11% Similarity=0.216 Sum_probs=20.8
Q ss_pred EEEcCCCCCHHHHHHHHH---HhcCCceEEE
Q 015196 47 IIVLPCGAGKSLVGVSAA---CRIKKSCLCL 74 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~---~~~~~~~lil 74 (411)
+..+--|.|||.++..++ ++.+++++++
T Consensus 6 v~s~KGGvGKTtia~nlA~~la~~g~~Vlli 36 (232)
T d1hyqa_ 6 VASGKGGTGKTTITANLGVALAQLGHDVTIV 36 (232)
T ss_dssp EEESSSCSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EECCCCCChHHHHHHHHHHHHHhCCCCEEEE
Confidence 445778999999987764 4456787776
No 199
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae [TaxId: 727]}
Probab=57.14 E-value=3.9 Score=31.41 Aligned_cols=23 Identities=13% Similarity=0.095 Sum_probs=16.3
Q ss_pred EEEcCCCCCHHHHHHHHHHhcCCc
Q 015196 47 IIVLPCGAGKSLVGVSAACRIKKS 70 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~~~~ 70 (411)
-|.++.|||||.++- .+...+-.
T Consensus 6 gITG~igSGKStv~~-~l~~~G~~ 28 (205)
T d1jjva_ 6 GLTGGIGSGKTTIAN-LFTDLGVP 28 (205)
T ss_dssp EEECSTTSCHHHHHH-HHHTTTCC
T ss_pred EEECCCCCCHHHHHH-HHHHCCCe
Confidence 368999999999864 34455533
No 200
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=56.56 E-value=25 Score=23.66 Aligned_cols=80 Identities=19% Similarity=0.143 Sum_probs=44.7
Q ss_pred CceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCccE
Q 015196 69 KSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGL 148 (411)
Q Consensus 69 ~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~l 148 (411)
+++|++=....+.......+... | ..|..++- ....+..+....+++
T Consensus 1 KrILiVdDd~~~~~~l~~~L~~~-g--------------------~~v~~a~~------------~~eal~~~~~~~~dl 47 (117)
T d2a9pa1 1 KKILIVDDEKPISDIIKFNMTKE-G--------------------YEVVTAFN------------GREALEQFEAEQPDI 47 (117)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHT-T--------------------CEEEEESS------------HHHHHHHHHHHCCSE
T ss_pred CEEEEEECCHHHHHHHHHHHHHC-C--------------------CEEEEECC------------HHHHHHHHHhcCCCE
Confidence 46788878777666666666653 2 22332222 123445555678999
Q ss_pred EEEecCCCCCchhHH--HHHHhhccccEEEEeeecc
Q 015196 149 LLMDEVHVVPAHMFR--KVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 149 vIiDE~H~~~~~~~~--~~~~~~~~~~~i~lSATp~ 182 (411)
||+| .+.-....+. +.+...+...++.+|+...
T Consensus 48 illD-~~mp~~~G~~~~~~i~~~~~~pvI~lt~~~~ 82 (117)
T d2a9pa1 48 IILD-LMLPEIDGLEVAKTIRKTSSVPILMLSAKDS 82 (117)
T ss_dssp EEEC-SSCSSSCHHHHHHHHHTTCCCCEEEEESCCS
T ss_pred EEec-cccCCCCccHHHHHHHhCCCCCEEEEecCCC
Confidence 9999 3322222222 2223334457888988764
No 201
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=56.18 E-value=11 Score=28.09 Aligned_cols=52 Identities=8% Similarity=-0.056 Sum_probs=38.2
Q ss_pred cCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecc
Q 015196 67 IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYN 122 (411)
Q Consensus 67 ~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~ 122 (411)
.+.++||+|+++..++.....|.+. |+ .+..++++... .-.+..+|+|+|--
T Consensus 30 ~g~r~lvfc~t~~~~~~l~~~L~~~-Gi---~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v 90 (174)
T d1c4oa2 30 RGERTLVTVLTVRMAEELTSFLVEH-GI---RARYLHHELDAFKRQALIRDLRLGHYDCLVGINL 90 (174)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHT-TC---CEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCC
T ss_pred cCCcEEEEEcchhHHHHHHHHHHhc-CC---ceEEEecccchHHHHHHHHHHHCCCeEEEEeeee
Confidence 4679999999999998888888774 44 57778876542 22466788887763
No 202
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=55.79 E-value=3.8 Score=32.57 Aligned_cols=21 Identities=29% Similarity=0.112 Sum_probs=16.7
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
....+.+|+|+|||..+-.+.
T Consensus 30 e~vaIvG~sGsGKSTLl~ll~ 50 (241)
T d2pmka1 30 EVIGIVGRSGSGKSTLTKLIQ 50 (241)
T ss_dssp CEEEEECSTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCCHHHHHHHHH
Confidence 477889999999998755554
No 203
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=55.00 E-value=3.5 Score=34.24 Aligned_cols=19 Identities=37% Similarity=0.363 Sum_probs=15.1
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
-.++++|+|+|||.+.-++
T Consensus 28 lnvi~G~NGsGKS~il~AI 46 (329)
T g1xew.1 28 FTAIVGANGSGKSNIGDAI 46 (329)
T ss_dssp EEEEEECTTSSSHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHH
Confidence 5579999999999984333
No 204
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=54.97 E-value=26 Score=26.51 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=47.6
Q ss_pred cCCCeEEEEecChhHHHHHHHHh---------CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeec-----cC-ccccCc
Q 015196 266 QRGDKIIVFADNLFALTEYAMKL---------RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSK-----VG-DNSIDI 330 (411)
Q Consensus 266 ~~~~~~ivf~~~~~~~~~l~~~l---------~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~-----~~-~~Gid~ 330 (411)
..+.+++|.+++.+.+.++.+.+ .+...+|..+..++...+ + ..+|||+|. .+ ...+++
T Consensus 70 ~~~~~~lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l---~---~~~IlV~TP~~l~~~l~~~~~~~ 143 (208)
T d1hv8a1 70 NNGIEAIILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKAL---K---NANIVVGTPGRILDHINRGTLNL 143 (208)
T ss_dssp SSSCCEEEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHH---H---TCSEEEECHHHHHHHHHTTCSCT
T ss_pred ccCcceEEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhc---C---CCCEEEEChHHHHHHHHcCCCCc
Confidence 55678999999999988877766 234566777665544333 2 357999983 22 345688
Q ss_pred cCccEEEEe
Q 015196 331 PEANVIIQI 339 (411)
Q Consensus 331 ~~~~~vi~~ 339 (411)
.++..+|+.
T Consensus 144 ~~l~~lViD 152 (208)
T d1hv8a1 144 KNVKYFILD 152 (208)
T ss_dssp TSCCEEEEE
T ss_pred ccCcEEEEE
Confidence 999998875
No 205
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=54.79 E-value=11 Score=31.42 Aligned_cols=33 Identities=18% Similarity=-0.069 Sum_probs=21.2
Q ss_pred CcceEEEcCCCCCHHHHHHHHHHh---cCCceEEEE
Q 015196 43 ARSGIIVLPCGAGKSLVGVSAACR---IKKSCLCLA 75 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~ 75 (411)
....-+.+|+|+|||...-.++.. .+.++-+++
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~~~~~~g~~vavla 89 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIA 89 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEeeCCCCCCHHHHHHHHHHHHHhcCCceeeec
Confidence 345567899999999876555432 344554444
No 206
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=54.70 E-value=13 Score=29.86 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=33.4
Q ss_pred CChhHHHHHHHHHhC---CCCcceEEEcCCCCCHHHHHHHHHHhcC-------CceEEEE
Q 015196 26 PRPYQEKSLSKMFGN---GRARSGIIVLPCGAGKSLVGVSAACRIK-------KSCLCLA 75 (411)
Q Consensus 26 l~~~Q~~ai~~~~~~---~~~~~~ll~~~tG~GKT~~a~~~~~~~~-------~~~lil~ 75 (411)
-|+.-.+-+...+.. ....-..|++.-|.|||..|..+..+.. ..++|+.
T Consensus 24 gR~~~~~~i~~~L~~~~~~~~~~v~I~GmgGiGKTtLA~~v~~~~~~~~~~~f~~~~Wv~ 83 (277)
T d2a5yb3 24 IREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVIASQALSKSDQLIGINYDSIVWLK 83 (277)
T ss_dssp CCHHHHHHHHHHHHHHTTSSSEEEEEECSTTSSHHHHHHHHHHHCSSTBTTTBSEEEEEE
T ss_pred CcHHHHHHHHHHHHhccCCCceEEEEECCCCCCHHHHHHHHHHhhhhhhhhcCceEEEEE
Confidence 477777666555421 2223456889999999999988775421 3467775
No 207
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.15 E-value=3.7 Score=32.91 Aligned_cols=21 Identities=33% Similarity=0.382 Sum_probs=17.0
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
..+.+.+|+|+|||..+-.+.
T Consensus 41 e~vaivG~sGsGKSTLl~li~ 61 (251)
T d1jj7a_ 41 EVTALVGPNGSGKSTVAALLQ 61 (251)
T ss_dssp CEEEEECSTTSSHHHHHHHHT
T ss_pred CEEEEECCCCCcHHHHHHHHh
Confidence 477889999999999865554
No 208
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}
Probab=53.28 E-value=6.2 Score=31.59 Aligned_cols=30 Identities=20% Similarity=0.160 Sum_probs=21.6
Q ss_pred eEEEcCCCCCHHHHHHHHH---HhcCCceEEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAA---CRIKKSCLCLA 75 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~---~~~~~~~lil~ 75 (411)
..+++-=|+|||.+++.++ ++.+++|+++=
T Consensus 4 Iai~gKGGvGKTT~a~nLA~~LA~~G~rVllID 36 (269)
T d1cp2a_ 4 VAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVG 36 (269)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred EEEECCCcCCHHHHHHHHHHHHHhCCCcEEEEe
Confidence 4456778999999987764 44566777664
No 209
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=52.32 E-value=4 Score=33.38 Aligned_cols=31 Identities=16% Similarity=0.023 Sum_probs=18.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHh---cCCceEEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACR---IKKSCLCLA 75 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~ 75 (411)
-.-+++++|||||.++-.+... .+-++.++.
T Consensus 6 IIgIaG~SGSGKTTva~~l~~i~~~~~v~~~iI~ 39 (288)
T d1a7ja_ 6 IISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIE 39 (288)
T ss_dssp EEEEESCC---CCTHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCCCCcHHHHHHHHHHHHhhcCCCeEEEe
Confidence 3557899999999997665433 344555554
No 210
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=51.73 E-value=4.2 Score=32.32 Aligned_cols=20 Identities=25% Similarity=0.144 Sum_probs=15.6
Q ss_pred cceEEEcCCCCCHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~ 63 (411)
..+.+.+|+|+|||..+-.+
T Consensus 29 e~vaivG~sGsGKSTLl~ll 48 (242)
T d1mv5a_ 29 SIIAFAGPSGGGKSTIFSLL 48 (242)
T ss_dssp EEEEEECCTTSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHH
Confidence 46778999999999775444
No 211
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.58 E-value=47 Score=25.33 Aligned_cols=66 Identities=11% Similarity=-0.032 Sum_probs=44.6
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHH
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKL 90 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~ 90 (411)
+..-|.|-+.+..+..... ...++.-.||+|-+.++++....-+.+++-+-............+.+
T Consensus 41 ~~i~~~~g~lL~~L~~~~~-~k~vLEiGt~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ 106 (219)
T d2avda1 41 SMMTCEQAQLLANLARLIQ-AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQ 106 (219)
T ss_dssp GSCCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHHHccC-CCeEEEEechhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHh
Confidence 3456788888888765432 25678999999999776665544456777777776666655555554
No 212
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.53 E-value=4.6 Score=34.74 Aligned_cols=19 Identities=32% Similarity=0.265 Sum_probs=15.2
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
-.++.+|+|+|||.+.-++
T Consensus 27 l~~i~G~NGsGKS~ileAi 45 (427)
T d1w1wa_ 27 FTSIIGPNGSGKSNMMDAI 45 (427)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4678999999999884444
No 213
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=51.51 E-value=4 Score=32.74 Aligned_cols=18 Identities=28% Similarity=0.157 Sum_probs=15.0
Q ss_pred cceEEEcCCCCCHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~ 61 (411)
....+.+++|||||..+-
T Consensus 45 e~vaivG~sGsGKSTLl~ 62 (255)
T d2hyda1 45 ETVAFVGMSGGGKSTLIN 62 (255)
T ss_dssp CEEEEECSTTSSHHHHHT
T ss_pred CEEEEECCCCCcHHHHHH
Confidence 477889999999998743
No 214
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=51.05 E-value=5.8 Score=29.23 Aligned_cols=22 Identities=14% Similarity=-0.004 Sum_probs=17.3
Q ss_pred CCcceEEEcCCCCCHHHHHHHH
Q 015196 42 RARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 42 ~~~~~ll~~~tG~GKT~~a~~~ 63 (411)
...+.++.+++|+|||-..-.+
T Consensus 12 k~~kI~lvG~~~vGKTsLl~~l 33 (186)
T d1f6ba_ 12 KTGKLVFLGLDNAGKTTLLHML 33 (186)
T ss_dssp CCEEEEEEEETTSSHHHHHHHH
T ss_pred CCCEEEEECCCCCCHHHHHHHH
Confidence 3458899999999999885443
No 215
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}
Probab=50.93 E-value=7.5 Score=31.51 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=21.3
Q ss_pred eEEEcCCCCCHHHHHHHHH---HhcCCceEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAA---CRIKKSCLCL 74 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~---~~~~~~~lil 74 (411)
..+.+-=|.|||.++..++ ++.++++|++
T Consensus 5 IaisgKGGVGKTT~a~NLA~~LA~~G~rVLlI 36 (289)
T d2afhe1 5 CAIYGKGGIGKSTTTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp EEEEECTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4456678999999987764 4557787766
No 216
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId: 562]}
Probab=50.92 E-value=4.6 Score=31.02 Aligned_cols=23 Identities=22% Similarity=0.057 Sum_probs=17.9
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
-.++.++.|||||..+-.+...+
T Consensus 4 fIviEG~dGsGKsT~~~~L~~~L 26 (210)
T d4tmka_ 4 YIVIEGLEGAGKTTARNVVVETL 26 (210)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 34567999999999987776554
No 217
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.55 E-value=4.8 Score=31.05 Aligned_cols=28 Identities=18% Similarity=0.018 Sum_probs=19.9
Q ss_pred EEEcCCCCCHHHHHHHHHHhc---CCceEEE
Q 015196 47 IIVLPCGAGKSLVGVSAACRI---KKSCLCL 74 (411)
Q Consensus 47 ll~~~tG~GKT~~a~~~~~~~---~~~~lil 74 (411)
.+.++.|+|||..+-.+...+ +.+++++
T Consensus 7 ~ieG~dGsGKsT~~~~L~~~L~~~g~~v~~~ 37 (209)
T d1nn5a_ 7 VLEGVDRAGKSTQSRKLVEALCAAGHRAELL 37 (209)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEEEE
Confidence 445999999999887776554 4455544
No 218
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=50.31 E-value=4.4 Score=32.50 Aligned_cols=21 Identities=24% Similarity=0.316 Sum_probs=16.6
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
....+.+|+|||||..+-.++
T Consensus 42 e~iaivG~sGsGKSTLl~ll~ 62 (253)
T d3b60a1 42 KTVALVGRSGSGKSTIASLIT 62 (253)
T ss_dssp CEEEEEECTTSSHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHh
Confidence 477889999999998854443
No 219
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=50.29 E-value=5 Score=31.79 Aligned_cols=20 Identities=25% Similarity=0.243 Sum_probs=15.3
Q ss_pred cceEEEcCCCCCHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~ 63 (411)
....+.+|.|+|||..+-.+
T Consensus 30 e~~~liG~sGaGKSTll~~i 49 (240)
T d1g2912 30 EFMILLGPSGCGKTTTLRMI 49 (240)
T ss_dssp CEEEEECSTTSSHHHHHHHH
T ss_pred CEEEEECCCCChHHHHHHHH
Confidence 36678999999999774443
No 220
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=50.02 E-value=5.4 Score=28.61 Aligned_cols=21 Identities=14% Similarity=-0.080 Sum_probs=16.9
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
..++.+++|+|||-..-.++.
T Consensus 2 KI~liG~~nvGKSSLln~l~~ 22 (166)
T d2qtvb1 2 KLLFLGLDNAGKTTLLHMLKN 22 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHhC
Confidence 578999999999988655543
No 221
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=49.72 E-value=17 Score=25.58 Aligned_cols=51 Identities=16% Similarity=0.062 Sum_probs=35.8
Q ss_pred cCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhh--hcCCCcEEEEec
Q 015196 67 IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKER--FRGNAGVVVTTY 121 (411)
Q Consensus 67 ~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~I~v~t~ 121 (411)
..+++||+|+++.-+++....|.+. ++ .+..++++.... -.+..+|+|+|-
T Consensus 34 ~~~k~IVFc~t~~~ae~la~~L~~~-G~---~~~~~H~~~~~~~~~~~~~~vlvaTd 86 (138)
T d1jr6a_ 34 KGGRHLIFCHSKKKCDELAAKLVAL-GI---NAVAYYRGLDVSVIPTNGDVVVVATD 86 (138)
T ss_dssp TTSCEEEECSCHHHHHHHHHHHHHH-TC---EEEEECTTCCSCCCTTSSCEEEEESS
T ss_pred CCCCEEEEeCcHHHHHHHHHHHhcc-cc---chhhhhccchhhhhhhhhcceeehhH
Confidence 4568999999999999988888775 43 466666654322 234567777775
No 222
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=49.57 E-value=5.4 Score=30.47 Aligned_cols=20 Identities=30% Similarity=0.396 Sum_probs=16.2
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+++|+|||...-.+.
T Consensus 2 ~V~ivG~~~~GKTsLl~~l~ 21 (207)
T d2fh5b1 2 AVLFVGLCDSGKTLLFVRLL 21 (207)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 67899999999998755444
No 223
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=49.57 E-value=4.9 Score=31.61 Aligned_cols=21 Identities=29% Similarity=0.327 Sum_probs=15.8
Q ss_pred cceEEEcCCCCCHHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
....+.+|.|||||.. +..+.
T Consensus 32 e~~~iiG~sGsGKSTL-l~~i~ 52 (230)
T d1l2ta_ 32 EFVSIMGPSGSGKSTM-LNIIG 52 (230)
T ss_dssp CEEEEECSTTSSHHHH-HHHHT
T ss_pred CEEEEECCCCCCcchh-hHhcc
Confidence 3677899999999976 44443
No 224
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=48.82 E-value=5 Score=32.70 Aligned_cols=20 Identities=15% Similarity=0.081 Sum_probs=15.9
Q ss_pred cCCccEEEEecCCCCCchhH
Q 015196 143 NREWGLLLMDEVHVVPAHMF 162 (411)
Q Consensus 143 ~~~~~lvIiDE~H~~~~~~~ 162 (411)
..++.++|+||.-...+...
T Consensus 174 ~~~p~illLDEPts~LD~~~ 193 (281)
T d1r0wa_ 174 YKDADLYLLDSPFGYLDVFT 193 (281)
T ss_dssp HSCCSEEEEESCCCSSCHHH
T ss_pred HhCccchhhcCccccCCHHH
Confidence 36788999999998887643
No 225
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=47.99 E-value=12 Score=27.21 Aligned_cols=34 Identities=21% Similarity=0.156 Sum_probs=26.1
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhc---CCceEEEEcCh
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRI---KKSCLCLATNA 78 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~---~~~~lil~P~~ 78 (411)
-..+....|-|||..|+..+.+. +.+|+++==.+
T Consensus 4 ~i~vytG~GKGKTTAAlG~alRA~G~G~rV~ivQFlK 40 (157)
T d1g5ta_ 4 IIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIK 40 (157)
T ss_dssp CEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEEeCCCCCcHHHHHHHHHHHhcCCCEEEEEEEec
Confidence 45677889999999999987553 57888886444
No 226
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=47.91 E-value=6 Score=28.34 Aligned_cols=20 Identities=20% Similarity=0.054 Sum_probs=16.0
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+++|+|||-..-.++
T Consensus 2 kivlvG~~~vGKSsLi~~l~ 21 (160)
T d1r8sa_ 2 RILMVGLDAAGKTTILYKLK 21 (160)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 46899999999998865543
No 227
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.54 E-value=5.9 Score=31.19 Aligned_cols=20 Identities=30% Similarity=0.270 Sum_probs=15.1
Q ss_pred cceEEEcCCCCCHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~ 63 (411)
.-+.+.+|.|+|||...-.+
T Consensus 27 ei~~liGpsGsGKSTLl~~i 46 (232)
T d2awna2 27 EFVVFVGPSGCGKSTLLRMI 46 (232)
T ss_dssp CEEEEECCTTSSHHHHHHHH
T ss_pred CEEEEECCCCChHHHHHHHH
Confidence 36678899999999774333
No 228
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=47.51 E-value=5.9 Score=31.35 Aligned_cols=20 Identities=35% Similarity=0.378 Sum_probs=15.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-+.+.+|.|+|||...-.+.
T Consensus 26 ~~~liGpnGaGKSTll~~i~ 45 (240)
T d2onka1 26 YCVLLGPTGAGKSVFLELIA 45 (240)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCChHHHHHHHHH
Confidence 45678999999997754444
No 229
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=47.45 E-value=7.4 Score=30.26 Aligned_cols=32 Identities=13% Similarity=0.009 Sum_probs=22.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhc-CCceEEEEc
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRI-KKSCLCLAT 76 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~-~~~~lil~P 76 (411)
-.++.+.-|+|||...-.++... +.++.|++.
T Consensus 5 v~iitGFLGaGKTTll~~lL~~~~~~riaVI~N 37 (222)
T d1nija1 5 VTLLTGFLGAGKTTLLRHILNEQHGYKIAVIEN 37 (222)
T ss_dssp EEEEEESSSSSCHHHHHHHHHSCCCCCEEEECS
T ss_pred EEEEeeCCCCCHHHHHHHHHhcCCCCcEEEEEe
Confidence 35778999999998755555443 457777764
No 230
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=47.19 E-value=6.1 Score=30.06 Aligned_cols=29 Identities=24% Similarity=0.069 Sum_probs=20.5
Q ss_pred eEEEcCCCCCHHHHHHHHHHhc---CCceEEE
Q 015196 46 GIIVLPCGAGKSLVGVSAACRI---KKSCLCL 74 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~---~~~~lil 74 (411)
..+.+.-|+|||..+-.+...+ +..+.++
T Consensus 3 I~ieG~dGsGKST~~~~L~~~l~~~g~~v~~~ 34 (208)
T d1gsia_ 3 IAIEGVDGAGKRTLVEKLSGAFRAAGRSVATL 34 (208)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 4567999999999987776554 3345444
No 231
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type 1, different strains [TaxId: 10298]}
Probab=46.77 E-value=5.5 Score=33.24 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=21.2
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLATN 77 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~ 77 (411)
+..|.++-|+|||..+-.+...+...-+.++|-
T Consensus 6 rI~IEG~iGsGKTTl~~~La~~l~~~~v~~~~E 38 (329)
T d1e2ka_ 6 RVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPE 38 (329)
T ss_dssp EEEECSCTTSSHHHHHHHHTC----CCEEEECC
T ss_pred EEEEECCcCCCHHHHHHHHHHHhCCCCeEEecc
Confidence 456789999999999777766665444555553
No 232
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=46.52 E-value=4.8 Score=30.87 Aligned_cols=21 Identities=19% Similarity=0.112 Sum_probs=16.4
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
....+.+|.|+|||...-.++
T Consensus 28 ei~~l~G~NGsGKSTLl~~i~ 48 (200)
T d1sgwa_ 28 NVVNFHGPNGIGKTTLLKTIS 48 (200)
T ss_dssp CCEEEECCTTSSHHHHHHHHT
T ss_pred CEEEEECCCCChHHHHHHHHh
Confidence 366789999999998855544
No 233
>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}
Probab=46.46 E-value=38 Score=22.78 Aligned_cols=83 Identities=14% Similarity=0.105 Sum_probs=45.3
Q ss_pred CCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhhhhcCCCcEEEEecceecccCCCChhhHHHHHHHhcCCcc
Q 015196 68 KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWG 147 (411)
Q Consensus 68 ~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~ 147 (411)
++++|++=....+.......+.++ | ..|..++-. ...+..+....++
T Consensus 2 ~krILiVDDd~~~~~~l~~~L~~~-g--------------------~~v~~a~~~------------~~al~~l~~~~~d 48 (121)
T d1mvoa_ 2 NKKILVVDDEESIVTLLQYNLERS-G--------------------YDVITASDG------------EEALKKAETEKPD 48 (121)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHT-T--------------------CEEEEESSH------------HHHHHHHHHHCCS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHC-C--------------------CEEEEECCH------------HHHHHHHhccccc
Confidence 457888877776666555555553 2 223332221 2334555567899
Q ss_pred EEEEecCCCCCchhHH---HHHHhhccccEEEEeeecccC
Q 015196 148 LLLMDEVHVVPAHMFR---KVISLTKSHCKLGLTATLVRE 184 (411)
Q Consensus 148 lvIiDE~H~~~~~~~~---~~~~~~~~~~~i~lSATp~~~ 184 (411)
+||+| .+.-....+. .+........++.+|+.....
T Consensus 49 lillD-~~mp~~~G~~~~~~~r~~~~~~~ii~lt~~~~~~ 87 (121)
T d1mvoa_ 49 LIVLD-VMLPKLDGIEVCKQLRQQKLMFPILMLTAKDEEF 87 (121)
T ss_dssp EEEEE-SSCSSSCHHHHHHHHHHTTCCCCEEEEECTTCCC
T ss_pred EEEec-ccccCCCCchhhhhhhccCCCCEEEEEEeeCCHH
Confidence 99999 3332222222 222222334788999877643
No 234
>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}
Probab=46.18 E-value=58 Score=24.91 Aligned_cols=124 Identities=13% Similarity=0.130 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcC
Q 015196 25 QPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTS 104 (411)
Q Consensus 25 ~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~ 104 (411)
..-|.|-+.+..++.... ...++.-.|++|-+.+.++-...-+.+++-+-............+.+ .|.. ..+....+
T Consensus 42 ~~~~~~g~~L~~L~~~~~-~k~iLEiGT~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~-~g~~-~~i~~~~g 118 (227)
T d1susa1 42 TTSADEGQFLSMLLKLIN-AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK-AGVD-HKIDFREG 118 (227)
T ss_dssp SCCHHHHHHHHHHHHHHT-CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH-TTCG-GGEEEEES
T ss_pred ccCHHHHHHHHHHHHhcC-CCcEEEecchhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHH-hccc-cceeeeeh
Confidence 455778888877754322 26688999999999987776554456777777666554444444444 2332 12322222
Q ss_pred chhhhhcCCCcEEEEecceecccCCCChhhHHHHHHH-----hcCCccEEEEecCCCCCchhHHHHHHhhccccEEEEee
Q 015196 105 DSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEI-----RNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTA 179 (411)
Q Consensus 105 ~~~~~~~~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~-----~~~~~~lvIiDE~H~~~~~~~~~~~~~~~~~~~i~lSA 179 (411)
... ..+..+ ....+|+|.+|=.|......+......++..-+|.+--
T Consensus 119 ~a~----------------------------~~L~~l~~~~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN 170 (227)
T d1susa1 119 PAL----------------------------PVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 170 (227)
T ss_dssp CHH----------------------------HHHHHHHHCGGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred HHH----------------------------HHHHHHHhccccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence 211 111222 13478999999555444445555555555554555433
No 235
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=45.90 E-value=9.2 Score=31.75 Aligned_cols=31 Identities=23% Similarity=-0.008 Sum_probs=20.2
Q ss_pred ceEEEcCCCCCHHHHHHHHHHh---cCCceEEEE
Q 015196 45 SGIIVLPCGAGKSLVGVSAACR---IKKSCLCLA 75 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~---~~~~~lil~ 75 (411)
..=+.+++|+|||...-.++.+ .+.++-|++
T Consensus 53 ~igitG~pGaGKSTli~~l~~~~~~~g~~vaVia 86 (323)
T d2qm8a1 53 RVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLA 86 (323)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEeeeCCCCCCHHHHHHHHHHHHhhcCCceeeee
Confidence 4557899999999886555533 344444444
No 236
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=45.63 E-value=35 Score=24.23 Aligned_cols=63 Identities=6% Similarity=-0.062 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEec
Q 015196 55 GKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTY 121 (411)
Q Consensus 55 GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~ 121 (411)
-|--....++...+.++||+|+++.-++.+...|... +. .+..+++.... .-.+...|+|+|-
T Consensus 15 ~K~~~L~~ll~~~~~k~IIF~~s~~~~~~l~~~L~~~-g~---~~~~~~~~~~~~~r~~~~~~f~~~~~~ilv~T~ 86 (155)
T d1hv8a2 15 ERFEALCRLLKNKEFYGLVFCKTKRDTKELASMLRDI-GF---KAGAIHGDLSQSQREKVIRLFKQKKIRILIATD 86 (155)
T ss_dssp GHHHHHHHHHCSTTCCEEEECSSHHHHHHHHHHHHHT-TC---CEEEECSSSCHHHHHHHHHHHHTTSSSEEEECT
T ss_pred HHHHHHHHHHccCCCCEEEEECchHHHHHHHhhhccc-cc---ccccccccchhhhhhhhhhhhhcccceeeeehh
Confidence 4555545556666779999999999888888877764 33 46667664321 1235678888875
No 237
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase {Bacteriophage T4 [TaxId: 10665]}
Probab=45.56 E-value=7.2 Score=30.53 Aligned_cols=23 Identities=9% Similarity=-0.120 Sum_probs=18.6
Q ss_pred eEEEcCCCCCHHHHHHHHHHhcC
Q 015196 46 GIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 46 ~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
.-|.++.|||||.+|-.+..+.+
T Consensus 4 IgiTG~igSGKsTva~~l~e~~g 26 (241)
T d1deka_ 4 IFLSGVKRSGKDTTADFIMSNYS 26 (241)
T ss_dssp EEEECCTTSSHHHHHHHHHHHSC
T ss_pred EEEECCCCCCHHHHHHHHHHhCC
Confidence 45789999999999877766655
No 238
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL2 [TaxId: 10090]}
Probab=45.51 E-value=6.4 Score=28.62 Aligned_cols=18 Identities=17% Similarity=0.049 Sum_probs=14.9
Q ss_pred ceEEEcCCCCCHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~ 62 (411)
+.++.+++|+|||-..-.
T Consensus 4 ki~ivG~~~~GKTsLi~~ 21 (165)
T d1ksha_ 4 RLLMLGLDNAGKTTILKK 21 (165)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 678999999999976543
No 239
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=45.42 E-value=5.9 Score=31.35 Aligned_cols=20 Identities=25% Similarity=0.145 Sum_probs=15.2
Q ss_pred cceEEEcCCCCCHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~ 63 (411)
.-..+.+|.|||||..+-.+
T Consensus 32 e~~~iiG~sGsGKSTLl~~i 51 (240)
T d3dhwc1 32 QIYGVIGASGAGKSTLIRCV 51 (240)
T ss_dssp CEEEEEESTTSSHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHH
Confidence 36678999999999774333
No 240
>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=45.00 E-value=58 Score=24.59 Aligned_cols=80 Identities=13% Similarity=0.070 Sum_probs=50.5
Q ss_pred CCCChhHHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEc
Q 015196 24 AQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFT 103 (411)
Q Consensus 24 ~~l~~~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~ 103 (411)
+...|.|-+.+..++.... ...++...||+|=+.++++.....+.+++.+-......+.....+.+ .|.. ..+....
T Consensus 38 m~i~~~~G~lL~~lv~~~k-pk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~-~gl~-~~i~l~~ 114 (214)
T d2cl5a1 38 MNVGDAKGQIMDAVIREYS-PSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNF-AGLQ-DKVTILN 114 (214)
T ss_dssp CSCHHHHHHHHHHHHHHHC-CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH-HTCG-GGEEEEE
T ss_pred cccCHHHHHHHHHHHHhhC-CCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHH-cCCC-ccceeee
Confidence 4567888888888865432 25688999999998877654444456777777666555554444444 3432 2355555
Q ss_pred Cch
Q 015196 104 SDS 106 (411)
Q Consensus 104 ~~~ 106 (411)
+..
T Consensus 115 Gd~ 117 (214)
T d2cl5a1 115 GAS 117 (214)
T ss_dssp SCH
T ss_pred ccc
Confidence 443
No 241
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=44.67 E-value=9.9 Score=30.86 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=25.8
Q ss_pred HHHHHHHHHhCCCCcceEEEcCCCCCHHHHHHHHHH
Q 015196 30 QEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 30 Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
=..+++.++.-..-.+..+.++.|+|||.++..++.
T Consensus 55 GIraID~l~pig~GQr~~If~~~g~GKt~ll~~~~~ 90 (285)
T d2jdia3 55 GIKAVDSLVPIGRGQRELIIGDRQTGKTSIAIDTII 90 (285)
T ss_dssp SCHHHHHHSCCBTTCBCEEEESTTSSHHHHHHHHHH
T ss_pred CceEEecccCccCCCEEEeecCCCCChHHHHHHHHH
Confidence 346777775433335889999999999988766653
No 242
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=44.16 E-value=5.1 Score=29.83 Aligned_cols=21 Identities=24% Similarity=0.184 Sum_probs=16.6
Q ss_pred CCCcceEEEcCCCCCHHHHHH
Q 015196 41 GRARSGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 41 ~~~~~~ll~~~tG~GKT~~a~ 61 (411)
...-..++.+++|+|||-..-
T Consensus 15 ~k~~KI~lvG~~~vGKTsLi~ 35 (182)
T d1moza_ 15 NKELRILILGLDGAGKTTILY 35 (182)
T ss_dssp SSCEEEEEEEETTSSHHHHHH
T ss_pred CceEEEEEECCCCCCHHHHHH
Confidence 344578899999999998654
No 243
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor beta-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.79 E-value=8.3 Score=29.17 Aligned_cols=21 Identities=29% Similarity=0.178 Sum_probs=16.6
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
..+++.+++|+|||-..-.+.
T Consensus 4 p~V~lvG~~n~GKTSLln~l~ 24 (209)
T d1nrjb_ 4 PSIIIAGPQNSGKTSLLTLLT 24 (209)
T ss_dssp CEEEEECSTTSSHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHh
Confidence 478899999999998754443
No 244
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=43.66 E-value=1.8 Score=33.03 Aligned_cols=19 Identities=26% Similarity=0.114 Sum_probs=14.4
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
-.+|.++.|+|||.+.-++
T Consensus 26 ~tvi~G~NGsGKStil~Ai 44 (222)
T d1qhla_ 26 VTTLSGGNGAGKSTTMAAF 44 (222)
T ss_dssp HHHHHSCCSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHH
Confidence 3467899999999884443
No 245
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.34 E-value=7.6 Score=28.52 Aligned_cols=20 Identities=30% Similarity=0.277 Sum_probs=16.3
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-.....+
T Consensus 5 KivvvG~~~vGKTsli~r~~ 24 (173)
T d2a5ja1 5 KYIIIGDTGVGKSCLLLQFT 24 (173)
T ss_dssp EEEEESSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHh
Confidence 46889999999998865554
No 246
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.20 E-value=8.2 Score=27.99 Aligned_cols=20 Identities=20% Similarity=0.054 Sum_probs=16.2
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+++|+|||-....++
T Consensus 4 Kv~liG~~~vGKSsLi~rl~ 23 (164)
T d1z2aa1 4 KMVVVGNGAVGKSSMIQRYC 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 46889999999998865544
No 247
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.20 E-value=8 Score=28.78 Aligned_cols=20 Identities=15% Similarity=0.069 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+++|+|||-..-.++
T Consensus 7 Ki~ivG~~~vGKTsLi~~l~ 26 (186)
T d2f7sa1 7 KLLALGDSGVGKTTFLYRYT 26 (186)
T ss_dssp EEEEESCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHh
Confidence 46889999999999765544
No 248
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=41.58 E-value=8.5 Score=28.11 Aligned_cols=21 Identities=19% Similarity=0.044 Sum_probs=16.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+++|+|||-..-.++.
T Consensus 7 Ki~vvG~~~vGKTsLi~~l~~ 27 (169)
T d3raba_ 7 KILIIGNSSVGKTSFLFRYAD 27 (169)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 478899999999988655543
No 249
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.56 E-value=8 Score=28.37 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=15.5
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.+.+|+|||-+.-.++
T Consensus 7 KI~lvG~~~vGKTsll~~~~ 26 (174)
T d2bmea1 7 KFLVIGNAGTGKSCLLHQFI 26 (174)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 47889999999997654443
No 250
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.48 E-value=11 Score=29.32 Aligned_cols=29 Identities=17% Similarity=0.126 Sum_probs=20.4
Q ss_pred hHHHHHHHHHhCCCCcceEEEcCCCCCHHHHH
Q 015196 29 YQEKSLSKMFGNGRARSGIIVLPCGAGKSLVG 60 (411)
Q Consensus 29 ~Q~~ai~~~~~~~~~~~~ll~~~tG~GKT~~a 60 (411)
...+.+...+.+. ..++.+++|.|||-..
T Consensus 84 ~g~~~L~~~l~~k---t~~~~G~SGVGKSTLi 112 (225)
T d1u0la2 84 MGIEELKEYLKGK---ISTMAGLSGVGKSSLL 112 (225)
T ss_dssp TTHHHHHHHHSSS---EEEEECSTTSSHHHHH
T ss_pred hhHhhHHHHhcCC---eEEEECCCCCCHHHHH
Confidence 3455666666554 7788899999998763
No 251
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=41.41 E-value=53 Score=25.03 Aligned_cols=70 Identities=11% Similarity=0.214 Sum_probs=44.6
Q ss_pred CCCeEEEEecChhHHHHHHHHhC-------C------ceeeCCCCHHHHHHHHHHhcCCCCeeEEEee-ccCccc-cCcc
Q 015196 267 RGDKIIVFADNLFALTEYAMKLR-------K------PMIYGATSHVERTKILQAFKCSRDLNTIFLS-KVGDNS-IDIP 331 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l~-------~------~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t-~~~~~G-id~~ 331 (411)
.+.++++.++++.-+.+..+.+. + ...++.....++...+.... ..+|+|+| ..+... .++.
T Consensus 85 ~~~rvliv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~Ilv~Tp~~l~~~~~~~~ 161 (237)
T d1gkub1 85 KGKRCYVIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLR---NFKIVITTTQFLSKHYRELG 161 (237)
T ss_dssp TSCCEEEEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGG---GCSEEEEEHHHHHHCSTTSC
T ss_pred hcCeEEEEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhcccc---ccceeccChHHHHHhhhhcC
Confidence 47799999999988777776651 1 12345555556655554333 45789997 334333 3566
Q ss_pred CccEEEEe
Q 015196 332 EANVIIQI 339 (411)
Q Consensus 332 ~~~~vi~~ 339 (411)
+++++|+.
T Consensus 162 ~~~~vVvD 169 (237)
T d1gkub1 162 HFDFIFVD 169 (237)
T ss_dssp CCSEEEES
T ss_pred CCCEEEEE
Confidence 78888874
No 252
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=41.41 E-value=46 Score=22.35 Aligned_cols=46 Identities=11% Similarity=0.179 Sum_probs=26.1
Q ss_pred HHHHHHhcCCccEEEEecCCCCCch--hHHHHHHhhccccEEEEeeecc
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPAH--MFRKVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~~--~~~~~~~~~~~~~~i~lSATp~ 182 (411)
..++.+....+++||+| .+.-... ...+.+.......+|.+||...
T Consensus 37 ~al~~l~~~~~dlii~D-~~mp~~~G~~~~~~~r~~~~~pii~lt~~~~ 84 (121)
T d1xhfa1 37 EMHQILSEYDINLVIMD-INLPGKNGLLLARELREQANVALMFLTGRDN 84 (121)
T ss_dssp HHHHHHHHSCCSEEEEC-SSCSSSCHHHHHHHHHHHCCCEEEEEESCCS
T ss_pred HHHHHHHhcCCCEEEee-cccCCccCcHHHHHHHhcCCCcEEEEECCCC
Confidence 34455556889999999 3222222 2222233334457899998654
No 253
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=40.69 E-value=8.7 Score=30.31 Aligned_cols=20 Identities=25% Similarity=0.247 Sum_probs=15.8
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-+.+.+|.|+|||...-.+.
T Consensus 34 ~~~liGpsGaGKSTLl~~i~ 53 (239)
T d1v43a3 34 FLVLLGPSGCGKTTTLRMIA 53 (239)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCChHHHHHHHHH
Confidence 56789999999998855444
No 254
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=40.28 E-value=6 Score=31.07 Aligned_cols=20 Identities=40% Similarity=0.370 Sum_probs=15.8
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-..+.+|.|+|||...-.+.
T Consensus 28 ~~~liGpsGaGKSTll~~l~ 47 (229)
T d3d31a2 28 YFVILGPTGAGKTLFLELIA 47 (229)
T ss_dssp EEEEECCCTHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHh
Confidence 56789999999998854444
No 255
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.10 E-value=9.2 Score=27.79 Aligned_cols=21 Identities=24% Similarity=0.286 Sum_probs=16.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+++|+|||-....++.
T Consensus 5 Ki~lvG~~~vGKTsLi~r~~~ 25 (167)
T d1kaoa_ 5 KVVVLGSGGVGKSALTVQFVT 25 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 578899999999987655543
No 256
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.01 E-value=9.2 Score=27.88 Aligned_cols=21 Identities=29% Similarity=0.151 Sum_probs=16.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.++.|+|||-.....+.
T Consensus 4 Ki~lvG~~~vGKTsli~r~~~ 24 (168)
T d2atva1 4 KLAIFGRAGVGKSALVVRFLT 24 (168)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 468899999999987665543
No 257
>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=39.90 E-value=54 Score=22.70 Aligned_cols=46 Identities=9% Similarity=0.141 Sum_probs=39.1
Q ss_pred CCCeEEEEec-ChhHHHHHHHHhCCceeeCCCCHHHHHHHHHHhcCC
Q 015196 267 RGDKIIVFAD-NLFALTEYAMKLRKPMIYGATSHVERTKILQAFKCS 312 (411)
Q Consensus 267 ~~~~~ivf~~-~~~~~~~l~~~l~~~~i~g~~~~~~r~~~~~~f~~~ 312 (411)
.+-++.+.+. +.+.+..+++.+++..+++..++.++...++.++.+
T Consensus 36 ~Gi~v~ilTGD~~~~a~~ia~~lgI~~v~~~~~p~~k~~~v~~~q~~ 82 (135)
T d2b8ea1 36 MGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAK 82 (135)
T ss_dssp TTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCHHHHHHHHHHHTTT
T ss_pred cCCEEEEEcCcchhhhhHHHhhhhhhhhccccchhHHHHHHHHHHcC
Confidence 4556666665 667799999999999999999999999999999986
No 258
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=39.78 E-value=8.5 Score=30.82 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=13.7
Q ss_pred ceEEEcCCCCCHHHHH
Q 015196 45 SGIIVLPCGAGKSLVG 60 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a 60 (411)
-.+++++.|+|||.+.
T Consensus 25 ln~IvG~NGsGKStiL 40 (292)
T g1f2t.1 25 INLIIGQNGSGKSSLL 40 (292)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 4578999999999884
No 259
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.50 E-value=56 Score=23.47 Aligned_cols=65 Identities=6% Similarity=-0.141 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHhc-CCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecc
Q 015196 54 AGKSLVGVSAACRI-KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYN 122 (411)
Q Consensus 54 ~GKT~~a~~~~~~~-~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~ 122 (411)
.=|.-....++... ..++||+|+++.-++.+...|.+. +. .+..++++... .-.+..+|+|+|--
T Consensus 12 ~~K~~~L~~ll~~~~~~k~iIF~~~~~~~~~l~~~L~~~-~~---~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~ 86 (168)
T d1t5ia_ 12 NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQ-NF---PAIAIHRGMPQEERLSRYQQFKDFQRRILVATNL 86 (168)
T ss_dssp GGHHHHHHHHHHHSCCSSEEEECSSHHHHHHHHHHHHHT-TC---CEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeeeecchhhhhhhccc-cc---cccccccccchhhhhhhhhhhccccceeeecccc
Confidence 34555545555444 368999999998888877777663 33 46677775432 22355778877743
No 260
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=39.48 E-value=23 Score=28.74 Aligned_cols=56 Identities=7% Similarity=-0.035 Sum_probs=37.9
Q ss_pred HHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh-----hhcCCCcEEEEecc
Q 015196 63 AACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE-----RFRGNAGVVVTTYN 122 (411)
Q Consensus 63 ~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~-----~~~~~~~I~v~t~~ 122 (411)
.+.+..++++|+||+..-+++....+.+. |. .|..+++...+ ...+..+|+|+|--
T Consensus 31 ~i~~~~g~~~~F~~s~~~~~~~a~~L~~~-g~---~V~~l~~~~~~~e~~~~~~~~~~~~~~t~~ 91 (299)
T d1yksa2 31 WILADKRPTAWFLPSIRAANVMAASLRKA-GK---SVVVLNRKTFEREYPTIKQKKPDFILATDI 91 (299)
T ss_dssp HHHHCCSCEEEECSCHHHHHHHHHHHHHT-TC---CEEECCSSSCC--------CCCSEEEESSS
T ss_pred HHHhcCCCEEEEeCCHHHHHHHHHHHHhc-CC---eEEEEcCcCcHhHHhhhhcCCcCEEEEech
Confidence 34456789999999999899888888774 32 46677775332 12345678887763
No 261
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.12 E-value=9.7 Score=27.68 Aligned_cols=20 Identities=10% Similarity=0.057 Sum_probs=16.5
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-.....+
T Consensus 5 KivlvG~~~vGKTsLi~r~~ 24 (167)
T d1z08a1 5 KVVLLGEGCVGKTSLVLRYC 24 (167)
T ss_dssp EEEEECCTTSCHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 57899999999998876554
No 262
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=38.98 E-value=8.9 Score=30.26 Aligned_cols=20 Identities=25% Similarity=0.179 Sum_probs=15.6
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-..+.+|.|+|||.+.-.+.
T Consensus 34 i~~liGpnGaGKSTl~~~i~ 53 (240)
T d1ji0a_ 34 IVTLIGANGAGKTTTLSAIA 53 (240)
T ss_dssp EEEEECSTTSSHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHh
Confidence 56688999999998854443
No 263
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4 [TaxId: 10331]}
Probab=38.75 E-value=13 Score=30.90 Aligned_cols=24 Identities=25% Similarity=0.119 Sum_probs=19.8
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+..+.++-|+|||..+-.+...+.
T Consensus 8 rI~iEG~iGsGKSTl~~~L~~~l~ 31 (333)
T d1p6xa_ 8 RIYLDGVYGIGKSTTGRVMASAAS 31 (333)
T ss_dssp EEEEECSTTSSHHHHHHHHHSGGG
T ss_pred EEEEECCccCCHHHHHHHHHHHhc
Confidence 567889999999999887777664
No 264
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.51 E-value=10 Score=27.66 Aligned_cols=20 Identities=20% Similarity=0.124 Sum_probs=15.7
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.+.+|+|||-....++
T Consensus 4 Ki~viG~~~vGKTsLi~r~~ 23 (171)
T d2erxa1 4 RVAVFGAGGVGKSSLVLRFV 23 (171)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 56889999999998755444
No 265
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=38.40 E-value=10 Score=27.77 Aligned_cols=21 Identities=24% Similarity=0.156 Sum_probs=16.8
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+++|+|||-....++.
T Consensus 4 Ki~~vG~~~vGKSsLi~~~~~ 24 (175)
T d1ky3a_ 4 KVIILGDSGVGKTSLMHRYVN 24 (175)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHc
Confidence 468899999999988666553
No 266
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=38.36 E-value=9.9 Score=30.71 Aligned_cols=23 Identities=17% Similarity=0.231 Sum_probs=18.6
Q ss_pred cceEEEcCCCCCHHHHHHHHHHh
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACR 66 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~ 66 (411)
.+..+.++.|+|||..+...+..
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~~~ 90 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTILN 90 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHHHT
T ss_pred ceEeeccCCCCChHHHHHHHHhh
Confidence 47889999999999887765543
No 267
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo sapiens), ARL5A [TaxId: 9606]}
Probab=38.06 E-value=9.8 Score=27.77 Aligned_cols=21 Identities=29% Similarity=0.116 Sum_probs=16.5
Q ss_pred CcceEEEcCCCCCHHHHHHHH
Q 015196 43 ARSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 43 ~~~~ll~~~tG~GKT~~a~~~ 63 (411)
..+.++.+.+|+|||-....+
T Consensus 15 ~~kI~vvG~~~~GKSsLi~rl 35 (177)
T d1zj6a1 15 EHKVIIVGLDNAGKTTILYQF 35 (177)
T ss_dssp CEEEEEEESTTSSHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHH
Confidence 357899999999999765443
No 268
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.01 E-value=10 Score=27.34 Aligned_cols=21 Identities=14% Similarity=0.148 Sum_probs=16.7
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+++|+|||-..-.++.
T Consensus 4 Kv~liG~~~vGKTsLl~~~~~ 24 (165)
T d1z06a1 4 KIIVIGDSNVGKTCLTYRFCA 24 (165)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 468899999999988665543
No 269
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.06 E-value=10 Score=27.91 Aligned_cols=20 Identities=20% Similarity=0.172 Sum_probs=16.0
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-.....+
T Consensus 4 KivvvG~~~vGKTsLi~~~~ 23 (177)
T d1kmqa_ 4 KLVIVGDGACGKTCLLIVNS 23 (177)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 57889999999998755544
No 270
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.05 E-value=11 Score=27.64 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+++|+|||-..-.++
T Consensus 6 Ki~vvG~~~vGKTsLi~~~~ 25 (175)
T d2f9la1 6 KVVLIGDSGVGKSNLLSRFT 25 (175)
T ss_dssp EEEEESSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 47889999999998765544
No 271
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=36.80 E-value=9.9 Score=30.35 Aligned_cols=20 Identities=25% Similarity=0.119 Sum_probs=15.3
Q ss_pred cceEEEcCCCCCHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~ 63 (411)
.-..+.+|.|+|||..+-.+
T Consensus 29 Ei~~iiG~sGsGKSTLl~~i 48 (258)
T d1b0ua_ 29 DVISIIGSSGSGKSTFLRCI 48 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHH
T ss_pred CEEEEECCCCCcHHHHHHHH
Confidence 36678899999999765444
No 272
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo sapiens), ARL8A [TaxId: 9606]}
Probab=36.77 E-value=11 Score=27.17 Aligned_cols=20 Identities=20% Similarity=-0.087 Sum_probs=15.8
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
+.++.++.|+|||-..-.+.
T Consensus 4 ki~i~G~~~~GKTsLl~~l~ 23 (164)
T d1zd9a1 4 ELTLVGLQYSGKTTFVNVIA 23 (164)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 57889999999998755443
No 273
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=36.75 E-value=60 Score=22.29 Aligned_cols=44 Identities=9% Similarity=0.224 Sum_probs=26.0
Q ss_pred HHHHHHhcCCccEEEEecCCCCCch----hHHHHHHhhccccEEEEeeec
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPAH----MFRKVISLTKSHCKLGLTATL 181 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~~----~~~~~~~~~~~~~~i~lSATp 181 (411)
..+..+....+++||+|- .++.. ....+....+...+|.+||..
T Consensus 35 eAl~~l~~~~~dlvilD~--~mp~~~G~e~~~~lr~~~~~~piI~lT~~~ 82 (137)
T d1ny5a1 35 EAYKLLSEKHFNVVLLDL--LLPDVNGLEILKWIKERSPETEVIVITGHG 82 (137)
T ss_dssp HHHHHHHHSCCSEEEEES--BCSSSBHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred HHHHHhhccccccchHHH--hhhhhhHHHHHHHHHHhCCCCCEEEEECCC
Confidence 444556667899999992 33332 222222332345789999854
No 274
>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}
Probab=36.61 E-value=55 Score=21.81 Aligned_cols=46 Identities=9% Similarity=0.148 Sum_probs=26.0
Q ss_pred HHHHHHhcCCccEEEEecCCCCCchh---HHHHHHhhccccEEEEeeecc
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPAHM---FRKVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~~~---~~~~~~~~~~~~~i~lSATp~ 182 (411)
..++.+....++++|+| .+.-.... ...+....+...++.+|+...
T Consensus 37 ~al~~~~~~~~dliilD-~~mp~~~G~e~~~~ir~~~~~~pvi~ls~~~~ 85 (118)
T d1u0sy_ 37 EAVEKYKELKPDIVTMD-ITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQ 85 (118)
T ss_dssp HHHHHHHHHCCSEEEEE-CSCGGGCHHHHHHHHHHHCTTCCEEEEECTTC
T ss_pred HHHHHHHhccCCEEEEe-cCCCCCCHHHHHHHHHHhCCCCcEEEEEccCC
Confidence 34455556789999999 33322222 222223334457899987654
No 275
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=36.50 E-value=11 Score=26.90 Aligned_cols=19 Identities=26% Similarity=0.163 Sum_probs=15.1
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
..++++.+|+|||-..-.+
T Consensus 7 kI~ivG~~~vGKSSLi~~~ 25 (169)
T d1upta_ 7 RILILGLDGAGKTTILYRL 25 (169)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5789999999999764443
No 276
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.47 E-value=11 Score=27.20 Aligned_cols=20 Identities=30% Similarity=0.207 Sum_probs=16.0
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.++.|+|||-..-..+
T Consensus 6 KivlvG~~~vGKTsli~~~~ 25 (166)
T d1z0fa1 6 KYIIIGDMGVGKSCLLHQFT 25 (166)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 46889999999998855554
No 277
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=36.14 E-value=27 Score=25.85 Aligned_cols=73 Identities=15% Similarity=0.072 Sum_probs=48.7
Q ss_pred cCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecceecccCCCChhhHHH
Q 015196 67 IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYNMVAFGGKRSEESEKI 137 (411)
Q Consensus 67 ~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~~l~~~~~~~~~~~~~ 137 (411)
.+.+++|+|+++.-++.....+.+. |+ .+..++++... .-.+..+|+|+|-- +...
T Consensus 30 ~~~~~iif~~~~~~~~~~~~~l~~~-g~---~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv-~~rG---------- 94 (181)
T d1t5la2 30 RNERTLVTTLTKKMAEDLTDYLKEA-GI---KVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINL-LREG---------- 94 (181)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHTT-TC---CEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCC-CSSS----------
T ss_pred cCCeEEEEeehhhhhHHHHHHHHhC-Cc---ceeEecCCccHHHHHHHHHHHHCCCCCEEEehhH-HHcc----------
Confidence 3578999999998777766666653 44 57788876543 22467899999953 3222
Q ss_pred HHHHhcCCccEEEEecCCCC
Q 015196 138 IEEIRNREWGLLLMDEVHVV 157 (411)
Q Consensus 138 ~~~~~~~~~~lvIiDE~H~~ 157 (411)
++-...++||.-.+...
T Consensus 95 ---iDip~v~~VI~~d~p~~ 111 (181)
T d1t5la2 95 ---LDIPEVSLVAILDADKE 111 (181)
T ss_dssp ---CCCTTEEEEEETTTTSC
T ss_pred ---CCCCCCCEEEEecCCcc
Confidence 11356678888777764
No 278
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.09 E-value=12 Score=27.29 Aligned_cols=20 Identities=15% Similarity=0.119 Sum_probs=16.3
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-....++
T Consensus 8 Ki~vvG~~~vGKTsLi~~l~ 27 (170)
T d1r2qa_ 8 KLVLLGESAVGKSSLVLRFV 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 56889999999998866554
No 279
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.31 E-value=12 Score=27.23 Aligned_cols=20 Identities=25% Similarity=0.253 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-.....+
T Consensus 6 Ki~lvG~~~vGKTsll~~~~ 25 (169)
T d1x1ra1 6 KLVVVGDGGVGKSALTIQFF 25 (169)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 57889999999998765554
No 280
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=35.12 E-value=59 Score=21.78 Aligned_cols=46 Identities=13% Similarity=0.223 Sum_probs=28.0
Q ss_pred HHHHHHhcCCccEEEEecCCCCCch----hHHHHHHhhccccEEEEeeeccc
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPAH----MFRKVISLTKSHCKLGLTATLVR 183 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~~----~~~~~~~~~~~~~~i~lSATp~~ 183 (411)
..+..+....+++||+| .+ ++.. ..+.+....+...+|.+||....
T Consensus 38 ~a~~~l~~~~~dlii~D-~~-mp~~~G~el~~~l~~~~~~~piI~~t~~~~~ 87 (123)
T d1krwa_ 38 EVLAALASKTPDVLLSD-IR-MPGMDGLALLKQIKQRHPMLPVIIMTAHSDL 87 (123)
T ss_dssp HHHHHHTTCCCSEEEEC-CS-SSSSTTHHHHHHHHHHSSSCCEEESCCCSCH
T ss_pred HHHHHHHhCCCCEEEeh-hh-cCCchHHHHHHHHHHhCCCCeEEEEecCCCH
Confidence 44466667889999999 33 3322 22333333344578999987653
No 281
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=34.97 E-value=11 Score=30.93 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=13.8
Q ss_pred ceEEEcCCCCCHHHHH
Q 015196 45 SGIIVLPCGAGKSLVG 60 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a 60 (411)
-.+++++.|+|||-+.
T Consensus 25 ~~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 25 INLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 5688999999999874
No 282
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.92 E-value=12 Score=27.30 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=17.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+.+|+|||-..-..+.
T Consensus 7 Ki~lvG~~~vGKTsLi~r~~~ 27 (171)
T d2erya1 7 RLVVVGGGGVGKSALTIQFIQ 27 (171)
T ss_dssp EEEEEECTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 578999999999988665553
No 283
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.84 E-value=12 Score=27.41 Aligned_cols=20 Identities=25% Similarity=0.263 Sum_probs=15.7
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-....++
T Consensus 8 Kv~lvG~~~vGKTsLi~r~~ 27 (173)
T d2fn4a1 8 KLVVVGGGGVGKSALTIQFI 27 (173)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 57899999999997654444
No 284
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.45 E-value=12 Score=27.60 Aligned_cols=21 Identities=19% Similarity=0.026 Sum_probs=16.8
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+..|+|||-....++.
T Consensus 4 KivliG~~~vGKTsli~r~~~ 24 (179)
T d1m7ba_ 4 KIVVVGDSQCGKTALLHVFAK 24 (179)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 468899999999988665553
No 285
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.98 E-value=13 Score=26.96 Aligned_cols=20 Identities=25% Similarity=0.250 Sum_probs=15.5
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-.....+
T Consensus 8 Ki~vvG~~~vGKTsli~~~~ 27 (170)
T d2g6ba1 8 KVMLVGDSGVGKTCLLVRFK 27 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 47889999999997754443
No 286
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus [TaxId: 274]}
Probab=33.93 E-value=12 Score=30.11 Aligned_cols=25 Identities=20% Similarity=0.011 Sum_probs=19.8
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
++..+.+..|+|||..+-.++...+
T Consensus 7 Rni~i~gh~~~GKTtL~e~ll~~~g 31 (276)
T d2bv3a2 7 RNIGIAAHIDAGKTTTTERILYYTG 31 (276)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhcC
Confidence 4788999999999988776665443
No 287
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=33.73 E-value=6.8 Score=31.03 Aligned_cols=21 Identities=33% Similarity=0.208 Sum_probs=16.5
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
....+.+|.|+|||...-.+.
T Consensus 32 e~~~iiG~sGsGKSTll~~i~ 52 (242)
T d1oxxk2 32 ERFGILGPSGAGKTTFMRIIA 52 (242)
T ss_dssp CEEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEECCCCCcHHHHHHHHH
Confidence 367789999999998855444
No 288
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.31 E-value=13 Score=26.84 Aligned_cols=20 Identities=25% Similarity=0.313 Sum_probs=16.2
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-..-.++
T Consensus 5 Ki~viG~~~vGKTsli~~l~ 24 (166)
T d1ctqa_ 5 KLVVVGAGGVGKSALTIQLI 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 47889999999998865554
No 289
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.15 E-value=13 Score=26.69 Aligned_cols=20 Identities=10% Similarity=-0.029 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-..-.++
T Consensus 2 Kv~vvG~~~vGKTsLi~r~~ 21 (164)
T d1yzqa1 2 KLVFLGEQSVGKTSLITRFM 21 (164)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 46889999999998866554
No 290
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.08 E-value=14 Score=26.82 Aligned_cols=18 Identities=22% Similarity=0.242 Sum_probs=14.2
Q ss_pred ceEEEcCCCCCHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~ 62 (411)
.+++.++.|+|||-..-.
T Consensus 3 Ki~lvG~~~vGKTsLi~~ 20 (168)
T d2gjsa1 3 KVLLLGAPGVGKSALARI 20 (168)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHH
Confidence 467899999999976433
No 291
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.03 E-value=79 Score=22.60 Aligned_cols=65 Identities=9% Similarity=-0.014 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHHhc-CCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecc
Q 015196 54 AGKSLVGVSAACRI-KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYN 122 (411)
Q Consensus 54 ~GKT~~a~~~~~~~-~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~ 122 (411)
.-|......++... ..++||+|+++.-++.+...|... +. .+..++++... ...+..+|+|+|--
T Consensus 17 ~~K~~~L~~ll~~~~~~k~iVF~~~~~~~~~l~~~L~~~-g~---~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~ 91 (171)
T d1s2ma2 17 RQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDL-GY---SCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDL 91 (171)
T ss_dssp GGHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHH-TC---CEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSC
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeeeehhhHhHHhhhcc-cc---cccccccccchhhhhhhhhhcccCccccccchhH
Confidence 34666655555554 478999999998888777777664 43 45666664332 22356778887763
No 292
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.94 E-value=14 Score=27.26 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=16.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+..|+|||-..-.++.
T Consensus 7 KivviG~~~vGKTsli~~~~~ 27 (183)
T d1mh1a_ 7 KCVVVGDGAVGKTCLLISYTT 27 (183)
T ss_dssp EEEEECSTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 578899999999987655543
No 293
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.91 E-value=13 Score=26.79 Aligned_cols=22 Identities=23% Similarity=0.075 Sum_probs=17.2
Q ss_pred cceEEEcCCCCCHHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~ 65 (411)
..+++.++.|+|||-..-.++.
T Consensus 5 ~Kv~liG~~~vGKTsLl~~~~~ 26 (167)
T d1xtqa1 5 RKIAILGYRSVGKSSLTIQFVE 26 (167)
T ss_dssp EEEEEEESTTSSHHHHHHHHHH
T ss_pred eEEEEECCCCcCHHHHHHHHHh
Confidence 3678899999999987655543
No 294
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.76 E-value=14 Score=26.68 Aligned_cols=20 Identities=20% Similarity=0.101 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.+.+|+|||-..-.++
T Consensus 6 Ki~lvG~~~vGKTsli~rl~ 25 (167)
T d1z0ja1 6 KVCLLGDTGVGKSSIMWRFV 25 (167)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 57889999999998765544
No 295
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.47 E-value=13 Score=27.60 Aligned_cols=21 Identities=19% Similarity=0.186 Sum_probs=16.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.++.|+|||-....++.
T Consensus 5 KvvllG~~~vGKTSli~r~~~ 25 (191)
T d2ngra_ 5 KCVVVGDGAVGKTCLLISYTT 25 (191)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 468899999999987655543
No 296
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus horikoshii [TaxId: 53953]}
Probab=32.19 E-value=14 Score=27.09 Aligned_cols=20 Identities=20% Similarity=0.061 Sum_probs=15.6
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.++||+|||-..-.++
T Consensus 2 ~I~lvG~~nvGKSsLin~l~ 21 (184)
T d2cxxa1 2 TIIFAGRSNVGKSTLIYRLT 21 (184)
T ss_dssp EEEEEEBTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 46789999999998754443
No 297
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=32.18 E-value=10 Score=29.71 Aligned_cols=19 Identities=37% Similarity=0.274 Sum_probs=14.6
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
-+.+.+|.|+|||...-.+
T Consensus 27 i~~iiG~nGaGKSTLl~~l 45 (231)
T d1l7vc_ 27 ILHLVGPNGAGKSTLLARM 45 (231)
T ss_dssp EEECBCCTTSSHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHH
Confidence 5667899999999874333
No 298
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=32.06 E-value=66 Score=21.39 Aligned_cols=45 Identities=11% Similarity=0.191 Sum_probs=25.0
Q ss_pred HHHHHhcCCccEEEEecCCCCCch---hHHHHHHhhccccEEEEeeecc
Q 015196 137 IIEEIRNREWGLLLMDEVHVVPAH---MFRKVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 137 ~~~~~~~~~~~lvIiDE~H~~~~~---~~~~~~~~~~~~~~i~lSATp~ 182 (411)
.++.+....++++|+| .+.-... ..+.+...-+...++.+||...
T Consensus 37 al~~~~~~~~dlillD-~~mP~~~G~el~~~lr~~~~~~pvi~lt~~~~ 84 (119)
T d1peya_ 37 ALDIVTKERPDLVLLD-MKIPGMDGIEILKRMKVIDENIRVIIMTAYGE 84 (119)
T ss_dssp HHHHHHHHCCSEEEEE-SCCTTCCHHHHHHHHHHHCTTCEEEEEESSCC
T ss_pred HHHHHHhCCCCEEEEe-ccCCCCCHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3345555688999999 3322222 2222222223447899998654
No 299
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.90 E-value=15 Score=26.52 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=15.8
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-..-..+
T Consensus 5 KivvvG~~~vGKTsli~r~~ 24 (167)
T d1c1ya_ 5 KLVVLGSGGVGKSALTVQFV 24 (167)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 47889999999997655544
No 300
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=31.78 E-value=15 Score=26.64 Aligned_cols=19 Identities=26% Similarity=0.081 Sum_probs=14.8
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
...+.+++|+|||-..-.+
T Consensus 2 ~V~liG~~n~GKSsLi~~L 20 (171)
T d1mkya1 2 TVLIVGRPNVGKSTLFNKL 20 (171)
T ss_dssp EEEEECCTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4678999999999875444
No 301
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=31.73 E-value=15 Score=26.58 Aligned_cols=20 Identities=15% Similarity=0.147 Sum_probs=15.3
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-....++
T Consensus 5 Ki~vvG~~~vGKTsLi~~~~ 24 (170)
T d1ek0a_ 5 KLVLLGEAAVGKSSIVLRFV 24 (170)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 56889999999997644443
No 302
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=31.38 E-value=1e+02 Score=23.29 Aligned_cols=75 Identities=15% Similarity=0.221 Sum_probs=47.7
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh-hhcCCCcEEEEecce
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE-RFRGNAGVVVTTYNM 123 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~I~v~t~~~ 123 (411)
.-+|-..+|+|.....+ ++.+..+.-+=++..+++...+.+.+. +. .+....++..+ .+.+..+++++....
T Consensus 43 ~~iLDiGcGtG~~~~~l---~~~~~~v~gvD~s~~mi~~a~~~~~~~-~~---~i~~~~~d~~~l~~~~~fD~I~~~~~~ 115 (251)
T d1wzna1 43 RRVLDLACGTGIPTLEL---AERGYEVVGLDLHEEMLRVARRKAKER-NL---KIEFLQGDVLEIAFKNEFDAVTMFFST 115 (251)
T ss_dssp CEEEEETCTTCHHHHHH---HHTTCEEEEEESCHHHHHHHHHHHHHT-TC---CCEEEESCGGGCCCCSCEEEEEECSSG
T ss_pred CEEEEeCCCCCccchhh---cccceEEEEEeeccccccccccccccc-cc---cchheehhhhhcccccccchHhhhhhh
Confidence 46899999999876543 345567888888888877777766653 22 34444443332 233456888887766
Q ss_pred ecc
Q 015196 124 VAF 126 (411)
Q Consensus 124 l~~ 126 (411)
+..
T Consensus 116 ~~~ 118 (251)
T d1wzna1 116 IMY 118 (251)
T ss_dssp GGG
T ss_pred hhc
Confidence 554
No 303
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=31.36 E-value=9.9 Score=29.93 Aligned_cols=19 Identities=26% Similarity=0.104 Sum_probs=14.8
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
-.-+.+|.|+|||...-.+
T Consensus 30 i~glvG~nGaGKSTLl~~l 48 (238)
T d1vpla_ 30 IFGLIGPNGAGKTTTLRII 48 (238)
T ss_dssp EEEEECCTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4558899999999885444
No 304
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.34 E-value=15 Score=26.71 Aligned_cols=20 Identities=15% Similarity=0.184 Sum_probs=15.5
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-..-.++
T Consensus 7 Ki~lvG~~~vGKTsLi~~l~ 26 (171)
T d2ew1a1 7 KIVLIGNAGVGKTCLVRRFT 26 (171)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 47889999999997654443
No 305
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.26 E-value=11 Score=27.44 Aligned_cols=17 Identities=24% Similarity=0.202 Sum_probs=14.0
Q ss_pred ceEEEcCCCCCHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~ 61 (411)
..++.+++|+|||-...
T Consensus 5 Ki~vvG~~~vGKTsli~ 21 (170)
T d1i2ma_ 5 KLVLVGDGGTGKTTFVK 21 (170)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred EEEEECCCCcCHHHHHH
Confidence 46889999999998743
No 306
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.12 E-value=16 Score=26.66 Aligned_cols=21 Identities=24% Similarity=0.132 Sum_probs=16.7
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.++.|+|||-..-.++.
T Consensus 8 KI~vvG~~~vGKSSli~~~~~ 28 (174)
T d1wmsa_ 8 KVILLGDGGVGKSSLMNRYVT 28 (174)
T ss_dssp EEEEECCTTSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 478899999999988655543
No 307
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Probab=30.94 E-value=15 Score=26.14 Aligned_cols=17 Identities=29% Similarity=0.071 Sum_probs=13.9
Q ss_pred ceEEEcCCCCCHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~ 61 (411)
.+++.+++|+|||-..-
T Consensus 3 kI~lvG~~nvGKSsLin 19 (161)
T d2gj8a1 3 KVVIAGRPNAGKSSLLN 19 (161)
T ss_dssp EEEEEESTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 56789999999997643
No 308
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.65 E-value=15 Score=26.39 Aligned_cols=21 Identities=24% Similarity=0.191 Sum_probs=16.3
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
.+++.+++|+|||-..-.++.
T Consensus 4 Ki~vvG~~~vGKTSli~~l~~ 24 (166)
T d1g16a_ 4 KILLIGDSGVGKSCLLVRFVE 24 (166)
T ss_dssp EEEEEESTTSSHHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHHh
Confidence 467899999999988655543
No 309
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=30.62 E-value=16 Score=26.91 Aligned_cols=20 Identities=25% Similarity=0.197 Sum_probs=16.1
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+.+|+|||-..-.++
T Consensus 4 Kv~vvG~~~vGKSSLi~~l~ 23 (184)
T d1vg8a_ 4 KVIILGDSGVGKTSLMNQYV 23 (184)
T ss_dssp EEEEECCTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 46889999999998865554
No 310
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]}
Probab=30.57 E-value=16 Score=26.42 Aligned_cols=20 Identities=30% Similarity=0.300 Sum_probs=15.9
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.+.+|+|||-..-.++
T Consensus 6 KivlvG~~~vGKTsli~~~~ 25 (168)
T d1u8za_ 6 KVIMVGSGGVGKSALTLQFM 25 (168)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHH
Confidence 67899999999997755444
No 311
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus musculus), ARL3 [TaxId: 10090]}
Probab=30.50 E-value=14 Score=26.80 Aligned_cols=18 Identities=17% Similarity=-0.010 Sum_probs=14.8
Q ss_pred cceEEEcCCCCCHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~ 61 (411)
-..++.+++|+|||-..-
T Consensus 17 ~kI~vvG~~~vGKSsLi~ 34 (176)
T d1fzqa_ 17 VRILLLGLDNAGKTTLLK 34 (176)
T ss_dssp EEEEEEESTTSSHHHHHH
T ss_pred EEEEEECCCCCCHHHHHH
Confidence 468899999999997643
No 312
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.95 E-value=16 Score=27.04 Aligned_cols=20 Identities=25% Similarity=0.209 Sum_probs=15.7
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.+..|+|||-....++
T Consensus 11 Ki~lvG~~~vGKTsLi~r~~ 30 (185)
T d2atxa1 11 KCVVVGDGAVGKTCLLMSYA 30 (185)
T ss_dssp EEEEEECTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 46789999999997755544
No 313
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=29.34 E-value=16 Score=27.10 Aligned_cols=20 Identities=20% Similarity=-0.054 Sum_probs=15.7
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
...|.++||+|||-..-.+.
T Consensus 25 ~I~lvG~~n~GKSTLin~L~ 44 (195)
T d1svia_ 25 EIALAGRSNVGKSSFINSLI 44 (195)
T ss_dssp EEEEEEBTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHhc
Confidence 57889999999998744443
No 314
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=29.27 E-value=16 Score=28.99 Aligned_cols=20 Identities=30% Similarity=0.360 Sum_probs=15.5
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-..+.+|.|+|||..+-.+.
T Consensus 32 i~~liG~nGaGKSTLl~~i~ 51 (254)
T d1g6ha_ 32 VTLIIGPNGSGKSTLINVIT 51 (254)
T ss_dssp EEEEECSTTSSHHHHHHHHT
T ss_pred EEEEECCCCCcHHHHHHHHH
Confidence 56788999999998755443
No 315
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=29.27 E-value=75 Score=21.14 Aligned_cols=47 Identities=19% Similarity=0.211 Sum_probs=22.2
Q ss_pred HHHHHhcCCccEEEEecCCCCCchhHHHHHHhh------ccccEEEEeeecccCc
Q 015196 137 IIEEIRNREWGLLLMDEVHVVPAHMFRKVISLT------KSHCKLGLTATLVRED 185 (411)
Q Consensus 137 ~~~~~~~~~~~lvIiDE~H~~~~~~~~~~~~~~------~~~~~i~lSATp~~~~ 185 (411)
.+..+....+++||+| .+.-....+. +...+ ....++.+||.....+
T Consensus 37 al~~~~~~~~dlil~D-~~mp~~dG~e-l~~~ir~~~~~~~iPii~lt~~~~~~~ 89 (123)
T d1mb3a_ 37 ALSIARENKPDLILMD-IQLPEISGLE-VTKWLKEDDDLAHIPVVAVTAFAMKGD 89 (123)
T ss_dssp HHHHHHHHCCSEEEEE-SBCSSSBHHH-HHHHHHHSTTTTTSCEEEEC------C
T ss_pred HHHHHHhCCCCEEEEE-eccCCCcHHH-HHHHHHhCCCcCCCCeEEEEEecCHHH
Confidence 3345555688999999 3332223332 22222 2226799998766443
No 316
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=29.17 E-value=12 Score=29.64 Aligned_cols=21 Identities=24% Similarity=0.113 Sum_probs=16.2
Q ss_pred cceEEEcCCCCCHHHHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~ 64 (411)
-+.+|.+.||+|||-+.=.++
T Consensus 33 l~I~LvG~tg~GKSSliN~il 53 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSII 53 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHHh
Confidence 477889999999998744433
No 317
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.15 E-value=70 Score=24.24 Aligned_cols=67 Identities=10% Similarity=0.049 Sum_probs=45.9
Q ss_pred CCeEEEEecChhHHHHHHHHh---------CCceeeCCCCHHHHHHHHHHhcCCCCeeEEEeecc------CccccCccC
Q 015196 268 GDKIIVFADNLFALTEYAMKL---------RKPMIYGATSHVERTKILQAFKCSRDLNTIFLSKV------GDNSIDIPE 332 (411)
Q Consensus 268 ~~~~ivf~~~~~~~~~l~~~l---------~~~~i~g~~~~~~r~~~~~~f~~~~~~~vlv~t~~------~~~Gid~~~ 332 (411)
..+++|++++.+-+.++.+.+ .+..+.|+.+..+....+ +. ..+|||+|.- -...+++.+
T Consensus 85 ~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l---~~--~~~Ilv~TPgrl~~~~~~~~~~~~~ 159 (222)
T d2j0sa1 85 ETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKL---DY--GQHVVAGTPGRVFDMIRRRSLRTRA 159 (222)
T ss_dssp SCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHH---HH--CCSEEEECHHHHHHHHHTTSSCCTT
T ss_pred CceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHh---cc--CCeEEeCCCCcHHhccccccccccc
Confidence 457899999999988887766 233566776655443333 33 3579999832 156678888
Q ss_pred ccEEEEe
Q 015196 333 ANVIIQI 339 (411)
Q Consensus 333 ~~~vi~~ 339 (411)
+.++|+.
T Consensus 160 l~~lVlD 166 (222)
T d2j0sa1 160 IKMLVLD 166 (222)
T ss_dssp CCEEEEE
T ss_pred ceeeeec
Confidence 9998875
No 318
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=28.90 E-value=14 Score=29.85 Aligned_cols=16 Identities=44% Similarity=0.443 Sum_probs=13.8
Q ss_pred ceEEEcCCCCCHHHHH
Q 015196 45 SGIIVLPCGAGKSLVG 60 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a 60 (411)
-.++++|.|+|||-+.
T Consensus 26 lnvlvG~NgsGKS~iL 41 (308)
T d1e69a_ 26 VTAIVGPNGSGKSNII 41 (308)
T ss_dssp EEEEECCTTTCSTHHH
T ss_pred eEEEECCCCCcHHHHH
Confidence 4688999999999983
No 319
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.80 E-value=17 Score=27.10 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=15.8
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
.+++.++.|+|||-..-.++
T Consensus 8 KivvvG~~~vGKTsli~~l~ 27 (194)
T d2bcgy1 8 KLLLIGNSGVGKSCLLLRFS 27 (194)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHHh
Confidence 46889999999998755444
No 320
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.51 E-value=18 Score=26.23 Aligned_cols=18 Identities=22% Similarity=0.259 Sum_probs=14.6
Q ss_pred ceEEEcCCCCCHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~ 62 (411)
.+++.+..|+|||-..-.
T Consensus 5 Kv~lvG~~~vGKTsLi~~ 22 (172)
T d2g3ya1 5 RVVLIGEQGVGKSTLANI 22 (172)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHH
Confidence 578899999999977543
No 321
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=28.49 E-value=48 Score=22.39 Aligned_cols=34 Identities=12% Similarity=0.116 Sum_probs=24.0
Q ss_pred CCCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCC
Q 015196 112 GNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVV 157 (411)
Q Consensus 112 ~~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~ 157 (411)
.+..|+|++|..+.. ......++.+|++||--++
T Consensus 81 ~GD~vII~sya~~~~------------~e~~~~~P~vv~~d~~N~i 114 (118)
T d1ppya_ 81 VGDIVIIASFVTMPD------------EEARTWRPNVAYFEGDNEM 114 (118)
T ss_dssp TTCEEEEEEEEEEEH------------HHHHTCCCEEEEEETTTEE
T ss_pred CCCEEEEEEcccCCH------------HHHhcCCCEEEEECCCCCE
Confidence 446789999988753 2334567889999986543
No 322
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=27.62 E-value=19 Score=26.19 Aligned_cols=20 Identities=25% Similarity=-0.042 Sum_probs=15.2
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
-..+.+.+|+|||-..-.++
T Consensus 7 ~I~lvG~~~~GKSSLin~l~ 26 (178)
T d1wf3a1 7 FVAIVGKPNVGKSTLLNNLL 26 (178)
T ss_dssp EEEEECSTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 46788999999998754443
No 323
>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}
Probab=27.61 E-value=1.6e+02 Score=24.46 Aligned_cols=70 Identities=19% Similarity=0.109 Sum_probs=34.5
Q ss_pred CCcEEEEecceecccCCCChhhHHHHHHHhcCCccEEEEecCCCCCc--h---hHHHHHHhhccccEEEEeeecccCch
Q 015196 113 NAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPA--H---MFRKVISLTKSHCKLGLTATLVREDE 186 (411)
Q Consensus 113 ~~~I~v~t~~~l~~~~~~~~~~~~~~~~~~~~~~~lvIiDE~H~~~~--~---~~~~~~~~~~~~~~i~lSATp~~~~~ 186 (411)
...++|++-..+.+... -.....+...- ...-.++++||+|-+.. + .+...... ...+..+++|....-.
T Consensus 176 ~~~~~iv~egvySmdGd-~apl~~l~~L~-~~y~~~L~vDeAHs~Gv~G~~G~G~~~~~~~--~~~~di~~gTlsKa~g 250 (396)
T d2bwna1 176 AAPKLIAFESVYSMDGD-FGPIKEICDIA-EEFGALTYIDEVHAVGMYGPRGAGVAERDGL--MHRIDIFNGTLAKAYG 250 (396)
T ss_dssp TSCEEEEEESBCTTTCC-BCCHHHHHHHH-HHHTCEEEEECTTTTTTSSTTSCCHHHHHTC--GGGCSEEEEESSSTTC
T ss_pred cCceeEEEEeeccCccc-ccccHhHHHHh-hhhcceeeeccceeeeeeccccccchhhcCC--ceeeeeeeeccccccc
Confidence 45566666444433322 11233333322 22234899999999873 2 22222221 1234556788765443
No 324
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.53 E-value=15 Score=28.29 Aligned_cols=18 Identities=17% Similarity=0.121 Sum_probs=14.8
Q ss_pred cceEEEcCCCCCHHHHHH
Q 015196 44 RSGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~ 61 (411)
...++.+..|+|||-+.-
T Consensus 7 ~KilllG~~~vGKTsll~ 24 (221)
T d1azta2 7 HRLLLLGAGESGKSTIVK 24 (221)
T ss_dssp EEEEEECSTTSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 378999999999997643
No 325
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.93 E-value=11 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.221 Sum_probs=8.6
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
.+++.+.+|+|||-..-.+
T Consensus 8 Ki~vvG~~~vGKTsLi~~l 26 (173)
T d2fu5c1 8 KLLLIGDSGVGKTCVLFRF 26 (173)
T ss_dssp EEEEECCCCC---------
T ss_pred EEEEECCCCcCHHHHHHHH
Confidence 4678999999999875443
No 326
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.78 E-value=19 Score=26.56 Aligned_cols=20 Identities=15% Similarity=0.013 Sum_probs=16.2
Q ss_pred ceEEEcCCCCCHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAA 64 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~ 64 (411)
..++.+..|+|||-+.....
T Consensus 4 Kiv~lG~~~vGKTsll~r~~ 23 (200)
T d2bcjq2 4 KLLLLGTGESGKSTFIKQMR 23 (200)
T ss_dssp EEEEEESTTSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHh
Confidence 56889999999998865553
No 327
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle domain {Bacillus subtilis [TaxId: 1423]}
Probab=26.53 E-value=17 Score=26.72 Aligned_cols=17 Identities=24% Similarity=-0.091 Sum_probs=14.2
Q ss_pred ceEEEcCCCCCHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~ 61 (411)
.+.+.+++|+|||-..-
T Consensus 3 ~VaiiG~~nvGKSSLin 19 (185)
T d1lnza2 3 DVGLVGFPSVGKSTLLS 19 (185)
T ss_dssp CEEEESSTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 57789999999998743
No 328
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal (G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Probab=26.51 E-value=21 Score=28.46 Aligned_cols=24 Identities=21% Similarity=0.281 Sum_probs=19.0
Q ss_pred cceEEEcCCCCCHHHHHHHHHHhc
Q 015196 44 RSGIIVLPCGAGKSLVGVSAACRI 67 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~a~~~~~~~ 67 (411)
++..+.+..|+|||..+-.++...
T Consensus 3 RNv~iiGh~~~GKTtL~e~ll~~~ 26 (267)
T d2dy1a2 3 RTVALVGHAGSGKTTLTEALLYKT 26 (267)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCcHHHHHHHHHHHc
Confidence 467889999999999977665444
No 329
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.34 E-value=19 Score=26.62 Aligned_cols=18 Identities=17% Similarity=0.041 Sum_probs=14.4
Q ss_pred ceEEEcCCCCCHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~ 62 (411)
..++.+..|+|||-+...
T Consensus 4 KivllG~~~vGKTsll~r 21 (200)
T d1zcba2 4 KILLLGAGESGKSTFLKQ 21 (200)
T ss_dssp EEEEECSTTSSHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 468899999999976443
No 330
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.23 E-value=21 Score=26.12 Aligned_cols=21 Identities=14% Similarity=-0.119 Sum_probs=17.0
Q ss_pred ceEEEcCCCCCHHHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSAAC 65 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~ 65 (411)
..++.++.|+|||-.....+.
T Consensus 7 ki~vlG~~~vGKTsLi~~~~~ 27 (175)
T d2bmja1 7 RLGVLGDARSGKSSLIHRFLT 27 (175)
T ss_dssp EEEEECCTTTTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHh
Confidence 678899999999988765543
No 331
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=25.58 E-value=67 Score=23.90 Aligned_cols=52 Identities=17% Similarity=0.162 Sum_probs=35.9
Q ss_pred cCCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCchhh---------hhcCCCcEEEEecc
Q 015196 67 IKKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSDSKE---------RFRGNAGVVVTTYN 122 (411)
Q Consensus 67 ~~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~~~~---------~~~~~~~I~v~t~~ 122 (411)
.+.++||+++++..++.+...+... ++ .+..++++... ...+..+|+|+|--
T Consensus 29 ~~~~~IIF~~t~~~~~~l~~~l~~~-~~---~~~~~h~~~~~~~r~~~~~~f~~g~~~ilvaTd~ 89 (200)
T d1oywa3 29 RGKSGIIYCNSRAKVEDTAARLQSK-GI---SAAAYHAGLENNVRADVQEKFQRDDLQIVVATVA 89 (200)
T ss_dssp TTCCEEEECSSHHHHHHHHHHHHHT-TC---CEEEECTTSCHHHHHHHHHHHHTTSCSEEEECTT
T ss_pred CCCCEEEEEeeehhhHHhhhhhccC-Cc---eeEEecCCCcHHHHHHHHHHHhcccceEEEecch
Confidence 3468999999999888887777663 33 56777775432 22356778888764
No 332
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=25.51 E-value=88 Score=20.72 Aligned_cols=47 Identities=19% Similarity=0.071 Sum_probs=26.4
Q ss_pred HHHHHHhcCCccEEEEecCCCCCc-hhHHHHHHh---hccccEEEEeeecc
Q 015196 136 KIIEEIRNREWGLLLMDEVHVVPA-HMFRKVISL---TKSHCKLGLTATLV 182 (411)
Q Consensus 136 ~~~~~~~~~~~~lvIiDE~H~~~~-~~~~~~~~~---~~~~~~i~lSATp~ 182 (411)
..+..+....++++|+|-.---.+ -...+.+.. .....++.+||...
T Consensus 35 ~al~~l~~~~~dlil~D~~mp~~~G~~l~~~lr~~~~~~~~pvi~lt~~~~ 85 (121)
T d1zesa1 35 SAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGE 85 (121)
T ss_dssp HHHHHSSSSCCSEEEECSSCTTSCHHHHHHHHHHSTTTTTSCEEEEESCCS
T ss_pred HHHHHHHccCCCEEEeecCCCCCCHHHHHHHHHhCccCCCCeEEEEECCCC
Confidence 444566667899999994422111 122222221 12347899998764
No 333
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=25.24 E-value=15 Score=26.73 Aligned_cols=28 Identities=32% Similarity=0.354 Sum_probs=19.1
Q ss_pred HHHHHhCCCCcceEEEcCCCCCHHHHHHH
Q 015196 34 LSKMFGNGRARSGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 34 i~~~~~~~~~~~~ll~~~tG~GKT~~a~~ 62 (411)
++.++... .-..++.++.|+|||-+...
T Consensus 4 ~~~~~~~k-~~kIvlvG~~~vGKTSli~r 31 (173)
T d1e0sa_ 4 LSKIFGNK-EMRILMLGLDAAGKTTILYK 31 (173)
T ss_dssp HHHHHTTC-CEEEEEEEETTSSHHHHHHH
T ss_pred hhhhhCCC-eEEEEEECCCCCCHHHHHHH
Confidence 34445432 24688999999999977543
No 334
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=25.13 E-value=23 Score=25.89 Aligned_cols=19 Identities=26% Similarity=0.018 Sum_probs=15.2
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
++.+.+.+|+|||-..-.+
T Consensus 10 kV~iiG~~~~GKSTLin~l 28 (186)
T d1mkya2 10 KVAIVGRPNVGKSTLFNAI 28 (186)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5678899999999875444
No 335
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli [TaxId: 562]}
Probab=24.44 E-value=17 Score=26.40 Aligned_cols=16 Identities=25% Similarity=0.052 Sum_probs=13.7
Q ss_pred cceEEEcCCCCCHHHH
Q 015196 44 RSGIIVLPCGAGKSLV 59 (411)
Q Consensus 44 ~~~ll~~~tG~GKT~~ 59 (411)
..+.+.+.|++|||-.
T Consensus 17 ~~I~lvG~~NvGKSSL 32 (188)
T d1puia_ 17 IEVAFAGRSNAGKSSA 32 (188)
T ss_dssp EEEEEEECTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4688999999999964
No 336
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.26 E-value=25 Score=25.58 Aligned_cols=19 Identities=26% Similarity=0.247 Sum_probs=15.2
Q ss_pred ceEEEcCCCCCHHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVSA 63 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~ 63 (411)
..++.+..|+|||-..-.+
T Consensus 9 Ki~vvG~~~vGKTsli~~l 27 (177)
T d1x3sa1 9 KILIIGESGVGKSSLLLRF 27 (177)
T ss_dssp EEEEECSTTSSHHHHHHHH
T ss_pred EEEEECCCCcCHHHHHHHH
Confidence 5789999999999875443
No 337
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus [TaxId: 10335]}
Probab=24.14 E-value=22 Score=29.46 Aligned_cols=24 Identities=13% Similarity=0.016 Sum_probs=19.6
Q ss_pred ceEEEcCCCCCHHHHHHHHHHhcC
Q 015196 45 SGIIVLPCGAGKSLVGVSAACRIK 68 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~~~~~~~ 68 (411)
+..+.++-|+|||..+-.+...+.
T Consensus 7 rI~IEG~iGsGKSTl~~~L~~~l~ 30 (331)
T d1osna_ 7 RIYLDGAYGIGKTTAAEEFLHHFA 30 (331)
T ss_dssp EEEEEESSSSCTTHHHHHHHHTTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHh
Confidence 467889999999999877776664
No 338
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle domain {Thermus thermophilus [TaxId: 274]}
Probab=23.08 E-value=19 Score=26.30 Aligned_cols=18 Identities=28% Similarity=-0.005 Sum_probs=14.7
Q ss_pred ceEEEcCCCCCHHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGVS 62 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~~ 62 (411)
.+.+.+.+|+|||-..-.
T Consensus 3 ~VaivG~~nvGKSTLin~ 20 (180)
T d1udxa2 3 DVGLVGYPNAGKSSLLAA 20 (180)
T ss_dssp SEEEECCGGGCHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 577889999999988544
No 339
>d1ozbi_ g.74.1.1 (I:) Preprotein translocase SecA C-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=21.86 E-value=11 Score=17.74 Aligned_cols=9 Identities=56% Similarity=1.302 Sum_probs=6.0
Q ss_pred cCCCCCHHH
Q 015196 50 LPCGAGKSL 58 (411)
Q Consensus 50 ~~tG~GKT~ 58 (411)
.|.||||-+
T Consensus 7 CpCgSgkky 15 (26)
T d1ozbi_ 7 CPCGSGKKY 15 (26)
T ss_dssp CTTTCSSBG
T ss_pred CCCCCCccH
Confidence 467888754
No 340
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=21.72 E-value=29 Score=25.31 Aligned_cols=17 Identities=18% Similarity=0.122 Sum_probs=14.3
Q ss_pred ceEEEcCCCCCHHHHHH
Q 015196 45 SGIIVLPCGAGKSLVGV 61 (411)
Q Consensus 45 ~~ll~~~tG~GKT~~a~ 61 (411)
..++.+..|+|||-+..
T Consensus 4 KivllG~~~vGKTsl~~ 20 (195)
T d1svsa1 4 KLLLLGAGESGKSTIVK 20 (195)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57889999999997754
No 341
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=21.28 E-value=1.5e+02 Score=23.60 Aligned_cols=34 Identities=12% Similarity=0.113 Sum_probs=26.4
Q ss_pred CCceEEEEcChhhHHHHHHHHHHHhCCCCCcEEEEcCc
Q 015196 68 KKSCLCLATNAVSVDQWAFQFKLWSTIQDDQICRFTSD 105 (411)
Q Consensus 68 ~~~~lil~P~~~l~~q~~~~~~~~~~~~~~~v~~~~~~ 105 (411)
++++||+|+++.-+++....|.+. |+ .+..++++
T Consensus 36 ggk~LVFcnSR~~aE~La~~L~~~-Gi---~a~~~Hgg 69 (299)
T d1a1va2 36 GGRHLIFCHSKKKCDELAAKLVAL-GI---NAVAYYRG 69 (299)
T ss_dssp SSEEEEECSSHHHHHHHHHHHHHT-TC---CEEEECTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHHC-CC---CEEEEeCC
Confidence 578999999999999999988774 44 35556554
No 342
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=20.93 E-value=30 Score=27.59 Aligned_cols=39 Identities=18% Similarity=0.174 Sum_probs=27.0
Q ss_pred CCccEEEEecCCCCCchhHHHHHHhhccccEEEEeeecc
Q 015196 144 REWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLV 182 (411)
Q Consensus 144 ~~~~lvIiDE~H~~~~~~~~~~~~~~~~~~~i~lSATp~ 182 (411)
.++++|++||++.+....+.-+.........+.+-|-|.
T Consensus 205 ~~~~~i~vDE~QD~~~~~~~~l~~~~~~~~~~~~~GD~~ 243 (306)
T d1uaaa1 205 NKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDD 243 (306)
T ss_dssp TTCSEEEESCGGGCBHHHHHHHHHHHTTTCCEEEECCGG
T ss_pred HHhhHHHHHHHHHhhHHHHhhhhhcccCCCcceEeecCc
Confidence 578999999999999887775544444444444555554
No 343
>d2b2na1 c.37.1.19 (A:26-333) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=20.05 E-value=57 Score=26.35 Aligned_cols=54 Identities=7% Similarity=0.115 Sum_probs=37.5
Q ss_pred CCCeEEEEecChhHHHHHHHHhCC----c-eeeC--------C-----CCHHHHHHHHHHhcCCCCeeEEEee
Q 015196 267 RGDKIIVFADNLFALTEYAMKLRK----P-MIYG--------A-----TSHVERTKILQAFKCSRDLNTIFLS 321 (411)
Q Consensus 267 ~~~~~ivf~~~~~~~~~l~~~l~~----~-~i~g--------~-----~~~~~r~~~~~~f~~~~~~~vlv~t 321 (411)
...+++|.|++...++.+++.|.. . +... . ....+|...+..+.++ +..|+|+|
T Consensus 13 ~~~p~lvv~~~~~~A~~l~~~L~~~~~~~v~~fP~~e~lpyd~~s~~~~i~~~R~~~L~~l~~~-~~~iiits 84 (308)
T d2b2na1 13 HAGPVVLIAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTM-QRGVLIVP 84 (308)
T ss_dssp CSSCEEEEESSHHHHHHHHHHHHTTCSSCEEECCCCCSCTTCSSCCCHHHHHHHHHHHHHGGGC-CSSEEEEE
T ss_pred hCCCEEEEcCCHHHHHHHHHHHHhcCCCceEEcCCcccCccccCCCChHHHHHHHHHHHHHhhc-CCceEEee
Confidence 356799999999999999998831 0 0010 1 1223688888888887 66777776
Done!