Query 015198
Match_columns 411
No_of_seqs 762 out of 2387
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 08:24:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015198.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015198hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.4E-40 4.7E-45 304.6 36.1 284 38-388 26-320 (321)
2 1vyh_C Platelet-activating fac 100.0 4.9E-40 1.7E-44 311.2 34.9 281 38-387 102-409 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 1E-38 3.5E-43 294.6 38.3 285 35-386 46-340 (340)
4 3vu4_A KMHSV2; beta-propeller 100.0 2E-38 6.8E-43 294.4 39.0 306 39-395 14-342 (355)
5 2pbi_B Guanine nucleotide-bind 100.0 1.3E-38 4.5E-43 295.5 35.8 288 34-386 54-354 (354)
6 2ynn_A Coatomer subunit beta'; 100.0 1.3E-38 4.4E-43 289.3 33.6 248 37-296 6-263 (304)
7 4gqb_B Methylosome protein 50; 100.0 6E-38 2.1E-42 289.5 30.5 281 40-389 26-331 (344)
8 3frx_A Guanine nucleotide-bind 100.0 4.4E-37 1.5E-41 281.1 33.1 293 37-389 10-317 (319)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 5E-37 1.7E-41 283.9 33.2 295 38-389 9-335 (345)
10 2xzm_R RACK1; ribosome, transl 100.0 2.9E-36 1E-40 278.5 36.7 296 37-389 14-340 (343)
11 4g56_B MGC81050 protein; prote 100.0 1.2E-37 4E-42 289.4 26.1 282 40-389 38-343 (357)
12 1erj_A Transcriptional repress 100.0 4.2E-36 1.4E-40 282.7 36.2 280 42-389 62-389 (393)
13 4ery_A WD repeat-containing pr 100.0 5.6E-36 1.9E-40 272.7 35.7 285 37-388 16-311 (312)
14 3iz6_a 40S ribosomal protein R 100.0 2.5E-37 8.4E-42 289.8 23.3 289 38-389 60-375 (380)
15 1nr0_A Actin interacting prote 100.0 7.6E-36 2.6E-40 296.8 33.5 289 38-387 184-609 (611)
16 3zwl_B Eukaryotic translation 100.0 7.6E-35 2.6E-39 270.5 37.9 284 38-389 26-346 (369)
17 3ow8_A WD repeat-containing pr 100.0 1.1E-35 3.9E-40 271.9 31.6 240 39-291 75-320 (321)
18 4gqb_B Methylosome protein 50; 100.0 4.5E-36 1.5E-40 276.9 27.0 244 42-295 80-334 (344)
19 2hes_X YDR267CP; beta-propelle 100.0 2.8E-35 9.6E-40 270.5 32.2 286 37-389 7-328 (330)
20 1vyh_C Platelet-activating fac 100.0 1.6E-35 5.3E-40 280.4 29.6 244 37-291 143-410 (410)
21 2ymu_A WD-40 repeat protein; u 100.0 1.2E-34 4.2E-39 286.1 36.4 275 38-386 297-577 (577)
22 1nr0_A Actin interacting prote 100.0 8.8E-35 3E-39 289.2 34.7 291 37-389 52-397 (611)
23 4aow_A Guanine nucleotide-bind 100.0 2.7E-34 9.2E-39 264.2 35.4 294 38-389 32-337 (340)
24 1gxr_A ESG1, transducin-like e 100.0 8E-34 2.7E-38 260.4 37.9 280 40-388 47-336 (337)
25 4g56_B MGC81050 protein; prote 100.0 9E-36 3.1E-40 276.7 22.0 248 40-296 90-347 (357)
26 3ei3_B DNA damage-binding prot 100.0 2.1E-34 7.1E-39 270.0 31.1 284 37-389 66-382 (383)
27 1sq9_A Antiviral protein SKI8; 100.0 6.4E-34 2.2E-38 267.6 31.8 246 38-297 10-327 (397)
28 1got_B GT-beta; complex (GTP-b 100.0 9.6E-34 3.3E-38 261.3 31.7 239 39-289 92-340 (340)
29 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-33 1.1E-37 253.8 33.0 280 36-389 10-296 (313)
30 3dm0_A Maltose-binding peripla 100.0 1E-33 3.5E-38 285.8 32.4 303 38-388 376-692 (694)
31 3i2n_A WD repeat-containing pr 100.0 7.5E-34 2.6E-38 262.9 28.8 304 39-389 13-353 (357)
32 1r5m_A SIR4-interacting protei 100.0 1.5E-33 5.1E-38 266.9 30.9 296 42-388 106-424 (425)
33 1k8k_C P40, ARP2/3 complex 41 100.0 1E-33 3.6E-38 263.5 29.0 241 40-292 4-274 (372)
34 2pm7_B Protein transport prote 100.0 1E-33 3.5E-38 256.1 27.8 247 39-292 4-285 (297)
35 1erj_A Transcriptional repress 100.0 5E-33 1.7E-37 261.7 32.1 238 44-294 123-391 (393)
36 2ymu_A WD-40 repeat protein; u 100.0 1.6E-32 5.4E-37 271.0 36.0 276 38-387 256-537 (577)
37 3k26_A Polycomb protein EED; W 100.0 4.3E-33 1.5E-37 258.6 28.9 285 39-388 13-365 (366)
38 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.2E-33 1.8E-37 256.9 28.7 249 40-297 57-340 (345)
39 3dwl_C Actin-related protein 2 100.0 1.7E-34 5.6E-39 269.9 18.4 241 40-293 7-282 (377)
40 1r5m_A SIR4-interacting protei 100.0 1.5E-32 5.1E-37 260.0 31.9 279 41-389 42-361 (425)
41 2ynn_A Coatomer subunit beta'; 100.0 1E-32 3.5E-37 250.4 29.4 244 38-293 49-303 (304)
42 4e54_B DNA damage-binding prot 100.0 4.7E-34 1.6E-38 272.4 21.5 288 39-389 114-430 (435)
43 3frx_A Guanine nucleotide-bind 100.0 2E-32 6.7E-37 250.3 30.6 241 39-293 60-318 (319)
44 3bg1_A Protein SEC13 homolog; 100.0 1E-33 3.6E-38 258.4 21.7 245 39-292 8-293 (316)
45 3vl1_A 26S proteasome regulato 100.0 3.7E-33 1.3E-37 264.5 25.6 278 45-390 57-366 (420)
46 2hes_X YDR267CP; beta-propelle 100.0 1.3E-32 4.4E-37 252.7 28.1 243 42-293 56-329 (330)
47 2pm9_A Protein WEB1, protein t 100.0 4.1E-34 1.4E-38 270.5 17.9 248 41-297 64-342 (416)
48 2pbi_B Guanine nucleotide-bind 100.0 4.4E-32 1.5E-36 251.6 30.2 240 39-289 101-354 (354)
49 3gre_A Serine/threonine-protei 100.0 2.4E-32 8.3E-37 260.5 28.8 250 41-301 60-368 (437)
50 3mkq_A Coatomer beta'-subunit; 100.0 9.8E-32 3.3E-36 275.9 35.1 284 37-389 6-302 (814)
51 3f3f_A Nucleoporin SEH1; struc 100.0 1.9E-32 6.5E-37 251.8 26.5 248 38-296 5-341 (351)
52 4h5i_A Guanine nucleotide-exch 100.0 8.8E-32 3E-36 250.5 30.6 197 90-294 136-345 (365)
53 3vl1_A 26S proteasome regulato 100.0 4.8E-32 1.7E-36 256.8 28.9 287 45-389 98-419 (420)
54 3jrp_A Fusion protein of prote 100.0 3.4E-32 1.1E-36 253.7 27.3 250 38-294 5-289 (379)
55 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-32 4.4E-37 266.6 25.0 242 43-293 132-429 (524)
56 1gxr_A ESG1, transducin-like e 100.0 3.6E-31 1.2E-35 242.7 33.1 237 42-291 95-336 (337)
57 2xzm_R RACK1; ribosome, transl 100.0 9.2E-32 3.1E-36 248.4 28.4 242 39-294 71-342 (343)
58 4a11_B DNA excision repair pro 100.0 1E-31 3.5E-36 253.0 28.9 249 38-296 37-369 (408)
59 4aez_A CDC20, WD repeat-contai 100.0 1.1E-30 3.8E-35 246.4 35.0 281 40-389 87-380 (401)
60 3v7d_B Cell division control p 100.0 8.2E-31 2.8E-35 251.9 34.4 275 38-389 115-421 (464)
61 3mmy_A MRNA export factor; mRN 100.0 2.3E-31 7.7E-36 246.9 29.3 288 34-391 29-348 (368)
62 4ggc_A P55CDC, cell division c 100.0 7.5E-31 2.5E-35 238.8 31.6 239 47-294 28-317 (318)
63 4ery_A WD repeat-containing pr 100.0 6E-31 2.1E-35 239.4 30.3 242 38-291 59-311 (312)
64 3dw8_B Serine/threonine-protei 100.0 9.7E-32 3.3E-36 256.7 25.7 244 41-296 25-377 (447)
65 3iz6_a 40S ribosomal protein R 100.0 8.3E-32 2.8E-36 252.2 24.2 248 38-294 102-377 (380)
66 1pgu_A Actin interacting prote 100.0 2.1E-30 7.2E-35 257.4 35.1 285 38-389 154-614 (615)
67 1yfq_A Cell cycle arrest prote 100.0 1.4E-31 4.6E-36 246.4 24.7 245 39-296 6-286 (342)
68 4gga_A P55CDC, cell division c 100.0 2.7E-30 9.3E-35 245.2 34.3 275 46-389 107-395 (420)
69 2pm9_A Protein WEB1, protein t 100.0 1.3E-32 4.6E-37 260.1 18.2 280 43-389 11-337 (416)
70 3sfz_A APAF-1, apoptotic pepti 100.0 3.9E-30 1.3E-34 275.7 39.3 319 39-389 610-992 (1249)
71 1pgu_A Actin interacting prote 100.0 7.5E-31 2.6E-35 260.6 30.1 279 40-389 14-328 (615)
72 4gga_A P55CDC, cell division c 100.0 4.6E-30 1.6E-34 243.6 33.6 247 40-298 143-401 (420)
73 4aez_A CDC20, WD repeat-contai 100.0 1.9E-30 6.7E-35 244.7 30.8 245 42-297 132-385 (401)
74 1p22_A F-BOX/WD-repeat protein 100.0 7.1E-30 2.4E-34 243.4 33.9 279 40-389 129-414 (435)
75 3k26_A Polycomb protein EED; W 100.0 3E-31 1E-35 246.1 23.7 238 42-292 67-366 (366)
76 2pm7_B Protein transport prote 100.0 3.3E-30 1.1E-34 233.0 28.7 248 83-390 5-286 (297)
77 1sq9_A Antiviral protein SKI8; 100.0 1.1E-30 3.7E-35 245.5 25.1 244 37-294 55-397 (397)
78 3v7d_B Cell division control p 100.0 6.3E-29 2.1E-33 238.7 37.8 241 38-296 156-425 (464)
79 3bg1_A Protein SEC13 homolog; 100.0 2.3E-30 7.9E-35 236.2 24.1 246 83-389 9-293 (316)
80 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9E-29 3.1E-33 236.5 36.0 275 38-389 112-391 (445)
81 4aow_A Guanine nucleotide-bind 100.0 2.8E-29 9.7E-34 230.6 29.8 244 39-294 81-339 (340)
82 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.2E-29 1.8E-33 238.5 32.5 238 45-290 5-337 (450)
83 2oaj_A Protein SNI1; WD40 repe 100.0 3.7E-29 1.3E-33 258.1 33.3 202 40-254 13-248 (902)
84 2oaj_A Protein SNI1; WD40 repe 100.0 2.4E-29 8.3E-34 259.5 31.8 295 40-396 147-668 (902)
85 3mkq_A Coatomer beta'-subunit; 100.0 1E-28 3.4E-33 253.6 36.2 245 38-294 49-304 (814)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.1E-28 7.2E-33 233.9 35.8 280 38-389 153-442 (445)
87 3sfz_A APAF-1, apoptotic pepti 100.0 7.7E-29 2.6E-33 265.7 36.1 282 38-389 651-1074(1249)
88 3dm0_A Maltose-binding peripla 100.0 2E-29 7E-34 254.4 28.5 242 39-292 425-693 (694)
89 3ei3_B DNA damage-binding prot 100.0 2.3E-29 7.9E-34 235.6 26.7 238 41-292 115-382 (383)
90 3zwl_B Eukaryotic translation 100.0 1.2E-28 4.1E-33 228.6 31.3 250 38-296 68-350 (369)
91 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-29 4.3E-34 235.9 24.0 248 38-296 46-365 (372)
92 3jro_A Fusion protein of prote 100.0 3.8E-30 1.3E-34 261.5 20.9 251 39-296 4-289 (753)
93 3i2n_A WD repeat-containing pr 100.0 4E-29 1.4E-33 231.1 25.0 240 41-294 62-355 (357)
94 2xyi_A Probable histone-bindin 100.0 2.7E-29 9.3E-34 239.1 23.5 246 39-296 123-414 (430)
95 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-29 5.2E-34 245.1 21.5 243 40-292 203-517 (524)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 6.4E-29 2.2E-33 234.3 24.6 248 38-295 75-345 (402)
97 3gre_A Serine/threonine-protei 100.0 2E-28 6.8E-33 233.4 28.0 240 42-289 109-437 (437)
98 3jrp_A Fusion protein of prote 100.0 5.3E-28 1.8E-32 225.2 28.7 247 83-389 7-287 (379)
99 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-28 5.7E-33 231.5 25.0 239 46-294 36-301 (402)
100 4a11_B DNA excision repair pro 100.0 1.6E-28 5.4E-33 231.2 24.4 305 64-389 22-365 (408)
101 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-27 3.8E-32 217.1 29.1 241 38-298 53-302 (313)
102 3bws_A Protein LP49; two-domai 100.0 2.5E-27 8.4E-32 225.4 32.1 276 44-388 122-431 (433)
103 3lrv_A PRE-mRNA-splicing facto 100.0 5E-28 1.7E-32 223.3 25.4 228 51-294 43-294 (343)
104 4e54_B DNA damage-binding prot 100.0 6.4E-29 2.2E-33 236.9 18.2 246 39-296 159-434 (435)
105 3mmy_A MRNA export factor; mRN 100.0 6.8E-28 2.3E-32 223.5 24.4 245 38-294 80-348 (368)
106 3dwl_C Actin-related protein 2 100.0 2.2E-29 7.7E-34 235.1 14.1 240 86-389 10-281 (377)
107 2xyi_A Probable histone-bindin 100.0 4.5E-27 1.5E-31 223.7 28.1 253 85-389 126-410 (430)
108 1l0q_A Surface layer protein; 100.0 2.3E-26 8E-31 215.7 32.0 222 58-295 4-236 (391)
109 1p22_A F-BOX/WD-repeat protein 100.0 3E-27 1E-31 225.3 25.6 237 38-297 167-419 (435)
110 1yfq_A Cell cycle arrest prote 100.0 1.3E-27 4.5E-32 219.7 22.1 229 39-284 51-315 (342)
111 3f3f_A Nucleoporin SEH1; struc 100.0 1E-26 3.5E-31 213.4 28.0 287 83-390 7-338 (351)
112 4h5i_A Guanine nucleotide-exch 100.0 6.7E-27 2.3E-31 217.5 26.4 279 44-389 14-343 (365)
113 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-28 5.4E-33 233.4 14.5 226 39-295 10-257 (588)
114 1l0q_A Surface layer protein; 100.0 1.8E-25 6.3E-30 209.5 34.0 241 44-299 31-282 (391)
115 3dw8_B Serine/threonine-protei 100.0 3.9E-27 1.3E-31 224.8 21.6 199 85-296 26-320 (447)
116 2w18_A PALB2, fancn, partner a 100.0 1.4E-25 4.7E-30 200.8 28.3 241 46-291 41-356 (356)
117 4gq1_A NUP37; propeller, trans 99.9 5E-26 1.7E-30 213.9 25.4 228 42-296 87-352 (393)
118 3bws_A Protein LP49; two-domai 99.9 3.7E-25 1.3E-29 210.3 31.2 239 40-292 165-432 (433)
119 3jro_A Fusion protein of prote 99.9 7.4E-27 2.5E-31 237.4 20.2 247 83-389 5-285 (753)
120 3lrv_A PRE-mRNA-splicing facto 99.9 5.2E-25 1.8E-29 203.0 27.7 192 91-296 40-248 (343)
121 4ggc_A P55CDC, cell division c 99.9 2.8E-24 9.5E-29 195.3 30.7 229 92-389 30-315 (318)
122 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.1E-25 1.1E-29 212.2 25.6 241 40-293 98-392 (450)
123 2j04_A TAU60, YPL007P, hypothe 99.9 1.6E-25 5.4E-30 212.9 16.7 224 39-291 47-296 (588)
124 2w18_A PALB2, fancn, partner a 99.9 1.6E-23 5.3E-28 187.5 26.8 234 89-387 41-355 (356)
125 3vu4_A KMHSV2; beta-propeller 99.9 3.4E-23 1.2E-27 191.8 27.5 242 69-390 3-272 (355)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-23 6.8E-28 197.4 24.0 245 43-295 61-347 (415)
127 4gq1_A NUP37; propeller, trans 99.9 1.2E-23 4.2E-28 197.5 21.7 218 39-292 131-389 (393)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.4E-21 4.9E-26 184.7 27.9 226 56-294 143-389 (415)
129 1nir_A Nitrite reductase; hemo 99.9 2.6E-21 8.9E-26 188.7 30.2 232 51-293 144-403 (543)
130 2ecf_A Dipeptidyl peptidase IV 99.9 3.1E-22 1.1E-26 203.4 24.2 238 44-291 36-366 (741)
131 3u4y_A Uncharacterized protein 99.9 1.6E-20 5.6E-25 171.6 30.2 231 50-295 3-255 (331)
132 1ri6_A Putative isomerase YBHE 99.9 6.7E-20 2.3E-24 168.0 30.5 273 57-392 5-311 (343)
133 1nir_A Nitrite reductase; hemo 99.9 4.6E-20 1.6E-24 179.9 29.9 249 43-298 220-520 (543)
134 3vgz_A Uncharacterized protein 99.9 1.2E-19 4.2E-24 167.1 31.1 239 42-296 38-307 (353)
135 1pby_B Quinohemoprotein amine 99.9 1.3E-20 4.4E-25 172.4 24.2 238 46-297 35-315 (337)
136 1ri6_A Putative isomerase YBHE 99.9 3.1E-20 1.1E-24 170.2 26.1 240 41-291 34-307 (343)
137 1xfd_A DIP, dipeptidyl aminope 99.9 2.1E-21 7E-26 196.7 19.8 240 45-289 17-341 (723)
138 3u4y_A Uncharacterized protein 99.9 8.3E-20 2.8E-24 166.9 27.8 246 42-296 38-308 (331)
139 2ojh_A Uncharacterized protein 99.9 1E-20 3.6E-25 169.3 19.6 236 39-283 36-293 (297)
140 2ojh_A Uncharacterized protein 99.9 1.6E-20 5.4E-25 168.1 20.5 216 64-295 21-261 (297)
141 3o4h_A Acylamino-acid-releasin 99.9 2.3E-20 7.8E-25 184.4 23.5 230 44-290 21-274 (582)
142 1pby_B Quinohemoprotein amine 99.9 8.3E-20 2.8E-24 167.0 24.5 259 57-389 2-310 (337)
143 3hfq_A Uncharacterized protein 99.9 1.1E-19 3.8E-24 167.4 24.6 241 42-291 37-316 (347)
144 2z3z_A Dipeptidyl aminopeptida 99.9 9.7E-20 3.3E-24 184.0 25.5 236 45-294 82-393 (706)
145 2ecf_A Dipeptidyl peptidase IV 99.9 5.8E-20 2E-24 186.6 23.5 234 46-292 110-413 (741)
146 2z3z_A Dipeptidyl aminopeptida 99.8 8.4E-20 2.9E-24 184.4 21.9 233 47-291 28-341 (706)
147 1k32_A Tricorn protease; prote 99.8 2.4E-19 8.1E-24 188.7 25.9 238 40-294 199-463 (1045)
148 1jmx_B Amine dehydrogenase; ox 99.8 2.7E-19 9.3E-24 164.4 22.0 229 49-296 4-329 (349)
149 3hfq_A Uncharacterized protein 99.8 1E-17 3.4E-22 154.3 32.0 281 58-397 4-324 (347)
150 1k32_A Tricorn protease; prote 99.8 1.4E-18 4.9E-23 182.8 26.9 238 43-294 294-602 (1045)
151 3vgz_A Uncharacterized protein 99.8 1.7E-17 5.8E-22 152.7 28.0 228 45-283 89-335 (353)
152 1xfd_A DIP, dipeptidyl aminope 99.8 4.8E-18 1.6E-22 172.0 26.0 240 46-294 62-395 (723)
153 3scy_A Hypothetical bacterial 99.8 1.2E-17 4.2E-22 154.6 26.5 238 43-291 48-336 (361)
154 1jof_A Carboxy-CIS,CIS-muconat 99.8 7.9E-18 2.7E-22 156.3 25.0 242 43-293 38-342 (365)
155 3pe7_A Oligogalacturonate lyas 99.8 4.9E-18 1.7E-22 158.7 22.4 245 40-295 26-332 (388)
156 1z68_A Fibroblast activation p 99.8 1.1E-19 3.8E-24 183.9 10.6 241 49-294 20-348 (719)
157 1q7f_A NHL, brain tumor CG1071 99.8 3.4E-16 1.2E-20 139.9 31.3 243 40-294 25-282 (286)
158 1jmx_B Amine dehydrogenase; ox 99.8 2.3E-17 7.9E-22 151.5 23.2 228 93-389 5-325 (349)
159 3scy_A Hypothetical bacterial 99.8 6.4E-17 2.2E-21 149.7 25.3 279 56-396 13-343 (361)
160 2oit_A Nucleoporin 214KDA; NH2 99.8 3.1E-17 1.1E-21 155.7 21.8 169 114-291 23-222 (434)
161 2oit_A Nucleoporin 214KDA; NH2 99.8 2.9E-16 1E-20 148.9 28.3 237 44-291 36-332 (434)
162 4a5s_A Dipeptidyl peptidase 4 99.8 7.2E-18 2.5E-22 171.1 17.8 246 44-295 16-356 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.8E-15 6.1E-20 140.3 26.9 227 58-291 4-290 (365)
164 3o4h_A Acylamino-acid-releasin 99.7 2E-16 6.7E-21 156.2 20.4 230 40-292 59-315 (582)
165 3c5m_A Oligogalacturonate lyas 99.7 2.9E-16 1E-20 146.8 20.1 234 45-295 36-332 (396)
166 3fvz_A Peptidyl-glycine alpha- 99.7 4.2E-15 1.4E-19 135.8 26.4 243 42-294 21-324 (329)
167 3pe7_A Oligogalacturonate lyas 99.7 9.7E-16 3.3E-20 143.0 22.1 242 41-292 77-382 (388)
168 2gop_A Trilobed protease; beta 99.7 1.2E-14 4.1E-19 133.5 27.7 223 43-292 13-291 (347)
169 2dg1_A DRP35, lactonase; beta 99.7 2.1E-14 7.2E-19 131.1 27.7 236 45-291 6-262 (333)
170 3azo_A Aminopeptidase; POP fam 99.7 4E-15 1.4E-19 149.0 23.8 240 39-291 18-322 (662)
171 1q7f_A NHL, brain tumor CG1071 99.7 1.4E-13 4.7E-18 122.9 31.3 234 88-389 30-280 (286)
172 3no2_A Uncharacterized protein 99.6 2.1E-13 7E-18 121.1 28.1 186 99-296 5-199 (276)
173 1z68_A Fibroblast activation p 99.6 5.5E-16 1.9E-20 156.8 12.9 191 92-296 20-295 (719)
174 3fvz_A Peptidyl-glycine alpha- 99.6 1.4E-13 4.6E-18 125.7 26.9 206 89-296 25-281 (329)
175 3e5z_A Putative gluconolactona 99.6 5.1E-13 1.8E-17 119.8 29.8 234 39-294 22-288 (296)
176 2z2n_A Virginiamycin B lyase; 99.6 7.8E-12 2.7E-16 111.8 36.8 235 41-290 11-253 (299)
177 3dsm_A Uncharacterized protein 99.6 9.4E-13 3.2E-17 120.1 29.4 216 64-295 16-256 (328)
178 2xdw_A Prolyl endopeptidase; a 99.6 5.8E-14 2E-18 141.8 23.3 246 41-294 121-416 (710)
179 2dg1_A DRP35, lactonase; beta 99.6 1.7E-12 5.7E-17 118.4 30.4 246 40-293 40-315 (333)
180 2gop_A Trilobed protease; beta 99.6 2.8E-13 9.4E-18 124.3 24.9 223 45-291 59-330 (347)
181 2oiz_A Aromatic amine dehydrog 99.6 7.7E-14 2.6E-18 129.0 21.2 235 49-297 54-341 (361)
182 3c5m_A Oligogalacturonate lyas 99.6 2.6E-13 8.8E-18 126.7 25.0 233 49-295 85-387 (396)
183 4a5s_A Dipeptidyl peptidase 4 99.6 7.7E-14 2.6E-18 141.5 22.2 192 90-294 19-296 (740)
184 2xdw_A Prolyl endopeptidase; a 99.6 1.7E-12 5.8E-17 131.0 28.5 239 54-294 81-370 (710)
185 3no2_A Uncharacterized protein 99.6 2.4E-12 8.1E-17 114.2 25.8 213 55-280 4-231 (276)
186 1rwi_B Serine/threonine-protei 99.6 8.8E-13 3E-17 116.4 22.9 236 46-296 25-268 (270)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.5E-12 2.6E-16 112.9 28.6 237 42-293 15-300 (314)
188 3azo_A Aminopeptidase; POP fam 99.5 2.4E-13 8.1E-18 136.1 20.2 246 39-294 62-371 (662)
189 3dsm_A Uncharacterized protein 99.5 4.1E-12 1.4E-16 115.8 26.5 236 45-296 44-305 (328)
190 3e5z_A Putative gluconolactona 99.5 4E-12 1.4E-16 114.0 26.0 193 86-291 26-245 (296)
191 2oiz_A Aromatic amine dehydrog 99.5 1.1E-12 3.6E-17 121.4 22.2 257 64-389 30-334 (361)
192 2qc5_A Streptogramin B lactona 99.5 1.3E-10 4.4E-15 103.8 35.3 233 42-290 17-258 (300)
193 1qks_A Cytochrome CD1 nitrite 99.5 1.4E-11 4.7E-16 120.1 30.4 228 56-294 167-423 (567)
194 2bkl_A Prolyl endopeptidase; m 99.5 8.4E-13 2.9E-17 132.9 22.6 231 53-291 76-348 (695)
195 2bkl_A Prolyl endopeptidase; m 99.5 2E-13 6.7E-18 137.5 17.6 245 41-295 117-400 (695)
196 1qks_A Cytochrome CD1 nitrite 99.5 2.9E-10 9.8E-15 110.7 34.3 236 45-293 197-478 (567)
197 2mad_H Methylamine dehydrogena 99.5 1.2E-10 4E-15 107.9 29.0 234 49-297 70-355 (373)
198 2z2n_A Virginiamycin B lyase; 99.4 6.5E-10 2.2E-14 99.2 32.0 235 43-294 55-297 (299)
199 3hrp_A Uncharacterized protein 99.4 7.8E-11 2.7E-15 110.6 25.9 237 44-291 130-409 (409)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.1E-10 3.7E-15 105.2 26.0 195 90-295 20-259 (314)
201 3g4e_A Regucalcin; six bladed 99.4 2.8E-10 9.6E-15 102.0 28.3 223 42-281 10-261 (297)
202 3g4e_A Regucalcin; six bladed 99.4 4.2E-10 1.4E-14 100.9 29.4 198 90-295 15-232 (297)
203 1yr2_A Prolyl oligopeptidase; 99.4 1.8E-11 6E-16 124.2 21.4 243 42-294 160-443 (741)
204 1yr2_A Prolyl oligopeptidase; 99.4 7.7E-11 2.6E-15 119.5 25.3 234 53-291 115-392 (741)
205 3sjl_D Methylamine dehydrogena 99.4 9.7E-11 3.3E-15 107.4 22.3 234 49-297 82-368 (386)
206 1rwi_B Serine/threonine-protei 99.4 8.7E-11 3E-15 103.5 21.3 193 89-293 25-223 (270)
207 2ghs_A AGR_C_1268P; regucalcin 99.3 3.5E-09 1.2E-13 96.2 29.8 218 45-282 49-292 (326)
208 2qc5_A Streptogramin B lactona 99.3 3.6E-09 1.2E-13 94.3 28.7 233 43-291 60-299 (300)
209 2ghs_A AGR_C_1268P; regucalcin 99.3 3.9E-09 1.3E-13 95.9 29.3 190 92-290 53-258 (326)
210 3iuj_A Prolyl endopeptidase; h 99.3 7E-11 2.4E-15 118.8 19.0 242 41-294 125-407 (693)
211 2ece_A 462AA long hypothetical 99.3 2.6E-09 9.1E-14 98.7 27.7 226 54-280 93-399 (462)
212 2mad_H Methylamine dehydrogena 99.3 1E-08 3.5E-13 94.8 31.8 233 52-296 28-311 (373)
213 3c75_H MADH, methylamine dehyd 99.3 2.8E-10 9.6E-15 106.2 21.2 229 54-297 82-407 (426)
214 3dr2_A Exported gluconolactona 99.3 3.7E-09 1.3E-13 95.1 26.0 231 37-289 37-303 (305)
215 1yiq_A Quinohemoprotein alcoho 99.2 7E-09 2.4E-13 103.8 26.7 237 56-296 121-509 (689)
216 2qe8_A Uncharacterized protein 99.2 4.2E-09 1.4E-13 96.4 22.5 241 45-288 17-317 (343)
217 3sjl_D Methylamine dehydrogena 99.2 3.5E-09 1.2E-13 97.2 21.6 230 50-296 38-324 (386)
218 3hrp_A Uncharacterized protein 99.2 2.7E-08 9.2E-13 93.2 28.1 194 89-294 132-356 (409)
219 1xip_A Nucleoporin NUP159; bet 99.2 9.3E-10 3.2E-14 101.3 16.8 167 46-233 39-230 (388)
220 3iuj_A Prolyl endopeptidase; h 99.2 2.7E-09 9.2E-14 107.2 21.7 196 86-293 127-360 (693)
221 1kb0_A Quinohemoprotein alcoho 99.1 1.2E-08 4E-13 102.0 25.1 236 56-296 128-511 (677)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.4E-08 1.2E-12 91.5 26.2 221 56-296 103-341 (376)
223 1xip_A Nucleoporin NUP159; bet 99.1 8.5E-10 2.9E-14 101.6 14.8 170 90-279 40-231 (388)
224 3hxj_A Pyrrolo-quinoline quino 99.1 3.9E-09 1.3E-13 95.7 18.5 262 46-390 61-325 (330)
225 3dr2_A Exported gluconolactona 99.1 2.6E-08 9E-13 89.4 23.6 190 89-291 46-266 (305)
226 3q7m_A Lipoprotein YFGL, BAMB; 99.0 4.1E-07 1.4E-11 84.1 28.9 221 56-296 53-300 (376)
227 1mda_H Methylamine dehydrogena 99.0 1.6E-08 5.3E-13 92.8 18.6 217 66-300 47-354 (368)
228 1kb0_A Quinohemoprotein alcoho 99.0 5.2E-07 1.8E-11 90.1 28.0 225 56-290 77-421 (677)
229 1yiq_A Quinohemoprotein alcoho 98.9 8.6E-07 3E-11 88.6 28.4 227 56-291 70-418 (689)
230 2ece_A 462AA long hypothetical 98.9 2.9E-06 1E-10 78.6 29.5 190 99-293 96-353 (462)
231 3hxj_A Pyrrolo-quinoline quino 98.9 1.9E-07 6.5E-12 84.4 20.7 218 56-295 107-327 (330)
232 2iwa_A Glutamine cyclotransfer 98.9 2.4E-06 8.4E-11 74.1 26.6 196 89-294 22-239 (266)
233 1fwx_A Nitrous oxide reductase 98.9 6.4E-08 2.2E-12 92.6 17.9 233 54-293 99-432 (595)
234 2xzh_A Clathrin heavy chain 1; 98.9 2.3E-05 7.8E-10 68.9 32.3 257 65-389 49-332 (365)
235 2ad6_A Methanol dehydrogenase 98.9 4.6E-07 1.6E-11 88.6 23.6 236 56-296 115-498 (571)
236 3nol_A Glutamine cyclotransfer 98.9 1.8E-06 6.3E-11 74.1 24.4 193 86-291 41-253 (262)
237 1kv9_A Type II quinohemoprotei 98.8 8.2E-07 2.8E-11 88.5 24.7 236 56-296 117-492 (668)
238 1npe_A Nidogen, entactin; glyc 98.8 6.5E-06 2.2E-10 72.1 28.0 218 45-274 36-263 (267)
239 1w6s_A Methanol dehydrogenase 98.8 4.2E-06 1.4E-10 81.8 27.8 233 59-296 124-507 (599)
240 2qe8_A Uncharacterized protein 98.8 2.2E-07 7.6E-12 84.9 17.8 200 88-294 17-280 (343)
241 2hz6_A Endoplasmic reticulum t 98.8 8E-10 2.7E-14 102.2 1.4 170 114-296 19-196 (369)
242 1npe_A Nidogen, entactin; glyc 98.8 7.2E-06 2.5E-10 71.8 26.8 229 56-297 1-243 (267)
243 2fp8_A Strictosidine synthase; 98.8 4.4E-06 1.5E-10 75.4 26.0 234 46-294 20-315 (322)
244 3nok_A Glutaminyl cyclase; bet 98.8 3.7E-06 1.3E-10 72.2 23.7 176 90-280 57-253 (268)
245 2hz6_A Endoplasmic reticulum t 98.8 4.6E-09 1.6E-13 97.1 6.2 216 55-294 8-238 (369)
246 4a2l_A BT_4663, two-component 98.8 2.8E-05 9.4E-10 79.3 33.9 236 47-295 175-439 (795)
247 3mbr_X Glutamine cyclotransfer 98.8 1.3E-05 4.4E-10 68.2 25.8 194 85-291 18-232 (243)
248 1bpo_A Protein (clathrin); cla 98.7 0.00017 5.7E-09 66.0 33.8 258 64-389 47-331 (494)
249 2iwa_A Glutamine cyclotransfer 98.7 2.1E-05 7.2E-10 68.2 26.0 194 46-249 22-238 (266)
250 3c75_H MADH, methylamine dehyd 98.7 3E-06 1E-10 79.0 21.5 99 114-213 99-217 (426)
251 2ad6_A Methanol dehydrogenase 98.6 1.5E-05 5.2E-10 77.8 25.2 193 55-257 62-344 (571)
252 4a2l_A BT_4663, two-component 98.6 0.00013 4.5E-09 74.3 33.2 236 44-294 214-482 (795)
253 2p4o_A Hypothetical protein; p 98.6 8.1E-05 2.8E-09 66.5 28.0 227 45-283 32-279 (306)
254 3nol_A Glutamine cyclotransfer 98.6 2.8E-05 9.6E-10 66.7 23.2 184 42-237 38-245 (262)
255 1flg_A Protein (quinoprotein e 98.6 7.6E-05 2.6E-09 72.9 28.7 236 56-296 117-520 (582)
256 1kv9_A Type II quinohemoprotei 98.5 7E-05 2.4E-09 74.6 27.9 191 56-256 66-341 (668)
257 1fwx_A Nitrous oxide reductase 98.5 3E-05 1E-09 74.4 23.5 184 97-293 99-362 (595)
258 3nok_A Glutaminyl cyclase; bet 98.5 4.2E-05 1.5E-09 65.7 21.4 179 47-236 57-254 (268)
259 3mbr_X Glutamine cyclotransfer 98.5 0.00016 5.6E-09 61.4 24.8 183 45-237 21-224 (243)
260 3v64_C Agrin; beta propeller, 98.4 0.00037 1.3E-08 63.4 28.3 236 46-296 35-279 (349)
261 3v65_B Low-density lipoprotein 98.4 0.00024 8.2E-09 65.7 27.3 234 48-296 80-322 (386)
262 2fp8_A Strictosidine synthase; 98.4 7.9E-05 2.7E-09 67.1 23.2 180 91-281 22-248 (322)
263 1w6s_A Methanol dehydrogenase 98.4 8E-05 2.7E-09 72.8 24.3 193 55-256 62-350 (599)
264 1ijq_A LDL receptor, low-densi 98.4 0.00083 2.9E-08 60.2 29.4 227 58-297 3-243 (316)
265 3v9f_A Two-component system se 98.4 0.00074 2.5E-08 68.6 32.1 235 45-294 211-480 (781)
266 1mda_H Methylamine dehydrogena 98.4 1E-05 3.5E-10 74.1 16.1 208 49-271 69-366 (368)
267 3v9f_A Two-component system se 98.4 0.00037 1.3E-08 70.8 29.4 237 43-294 311-570 (781)
268 3p5b_L Low density lipoprotein 98.4 0.0014 4.7E-08 60.9 30.4 229 57-297 84-325 (400)
269 1flg_A Protein (quinoprotein e 98.3 0.00059 2E-08 66.6 27.2 107 57-170 69-202 (582)
270 2p4o_A Hypothetical protein; p 98.3 0.00057 1.9E-08 60.9 24.5 189 89-291 33-241 (306)
271 3qqz_A Putative uncharacterize 98.3 0.00093 3.2E-08 57.5 24.6 197 39-246 21-251 (255)
272 3sov_A LRP-6, low-density lipo 98.2 0.0014 4.7E-08 58.8 26.2 227 58-296 6-242 (318)
273 4hw6_A Hypothetical protein, I 98.2 0.00094 3.2E-08 62.7 26.1 240 45-291 139-432 (433)
274 3tc9_A Hypothetical hydrolase; 98.2 0.00077 2.6E-08 63.2 24.4 239 45-291 137-429 (430)
275 2xbg_A YCF48-like protein; pho 98.2 0.0037 1.3E-07 56.2 29.5 233 44-294 35-280 (327)
276 2xzh_A Clathrin heavy chain 1; 98.2 0.0034 1.2E-07 55.3 29.4 229 49-294 71-334 (365)
277 3amr_A 3-phytase; beta-propell 98.1 0.0011 3.6E-08 59.5 22.2 173 114-291 50-262 (355)
278 3m0c_C LDL receptor, low-densi 98.1 0.0045 1.5E-07 62.4 29.2 228 58-297 397-637 (791)
279 3v65_B Low-density lipoprotein 98.1 0.0024 8.1E-08 59.0 25.2 203 45-257 116-327 (386)
280 1k3i_A Galactose oxidase precu 98.1 0.00036 1.2E-08 69.4 20.9 238 49-294 190-499 (656)
281 3v64_C Agrin; beta propeller, 98.1 0.0042 1.4E-07 56.4 26.1 203 45-257 73-284 (349)
282 2xe4_A Oligopeptidase B; hydro 98.0 0.00021 7.3E-09 72.2 18.8 245 41-294 169-460 (751)
283 1k3i_A Galactose oxidase precu 98.0 0.00089 3E-08 66.6 22.5 233 44-281 242-530 (656)
284 3kya_A Putative phosphatase; s 98.0 0.0033 1.1E-07 59.4 25.0 251 46-299 140-482 (496)
285 3p5b_L Low density lipoprotein 98.0 0.01 3.5E-07 55.0 30.3 204 44-257 111-329 (400)
286 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0096 3.3E-07 58.6 28.9 227 57-296 7-241 (628)
287 1bpo_A Protein (clathrin); cla 98.0 0.01 3.6E-07 54.3 29.8 231 49-294 70-333 (494)
288 3qqz_A Putative uncharacterize 97.9 0.0079 2.7E-07 51.7 26.7 199 82-290 21-251 (255)
289 1ijq_A LDL receptor, low-densi 97.9 0.012 4E-07 52.6 28.1 204 44-257 29-247 (316)
290 1xi4_A Clathrin heavy chain; a 97.8 0.0015 5.2E-08 68.4 19.4 221 64-296 47-293 (1630)
291 2xe4_A Oligopeptidase B; hydro 97.7 0.00099 3.4E-08 67.3 16.6 198 89-290 175-398 (751)
292 3sov_A LRP-6, low-density lipo 97.7 0.026 8.9E-07 50.4 26.0 200 46-257 36-247 (318)
293 3tc9_A Hypothetical hydrolase; 97.7 0.0069 2.4E-07 56.7 21.2 152 135-292 138-301 (430)
294 3m0c_C LDL receptor, low-densi 97.7 0.047 1.6E-06 55.1 28.3 204 44-257 423-641 (791)
295 2p9w_A MAL S 1 allergenic prot 97.6 0.012 4.1E-07 52.2 20.1 150 92-249 17-216 (334)
296 1n7d_A LDL receptor, low-densi 97.5 0.00032 1.1E-08 70.1 10.1 229 58-299 379-621 (699)
297 4a0p_A LRP6, LRP-6, low-densit 97.5 0.09 3.1E-06 51.7 28.8 201 45-256 37-245 (628)
298 4hw6_A Hypothetical protein, I 97.4 0.0079 2.7E-07 56.3 17.3 151 135-292 140-304 (433)
299 1n7d_A LDL receptor, low-densi 97.4 0.00076 2.6E-08 67.4 10.6 201 45-257 406-623 (699)
300 3s94_A LRP-6, low-density lipo 97.3 0.089 3E-06 51.6 24.8 228 57-297 10-248 (619)
301 3ott_A Two-component system se 97.3 0.18 6.3E-06 50.7 30.6 232 44-294 21-262 (758)
302 2xbg_A YCF48-like protein; pho 97.3 0.035 1.2E-06 49.7 19.5 190 44-245 121-319 (327)
303 2p9w_A MAL S 1 allergenic prot 97.2 0.02 7E-07 50.8 17.1 156 135-292 14-215 (334)
304 3ei3_A DNA damage-binding prot 97.2 0.31 1.1E-05 51.4 36.3 234 44-291 553-872 (1158)
305 3kya_A Putative phosphatase; s 97.1 0.036 1.2E-06 52.4 18.2 153 136-291 141-340 (496)
306 2ism_A Putative oxidoreductase 97.0 0.19 6.6E-06 45.4 24.6 227 44-280 30-333 (352)
307 3pbp_A Nucleoporin NUP82; beta 96.9 0.068 2.3E-06 49.0 17.5 139 146-288 35-208 (452)
308 3s94_A LRP-6, low-density lipo 96.9 0.37 1.2E-05 47.2 26.8 224 58-294 319-553 (619)
309 3sre_A PON1, serum paraoxonase 96.8 0.26 8.9E-06 44.4 21.2 183 93-282 55-287 (355)
310 2be1_A Serine/threonine-protei 96.8 0.031 1.1E-06 50.1 14.4 109 57-171 11-140 (339)
311 1xi4_A Clathrin heavy chain; a 96.7 0.063 2.1E-06 56.7 17.7 230 50-294 71-333 (1630)
312 3pbp_A Nucleoporin NUP82; beta 96.6 0.27 9.2E-06 45.1 18.8 97 195-293 39-159 (452)
313 3amr_A 3-phytase; beta-propell 96.5 0.27 9.3E-06 44.0 18.1 150 187-391 41-212 (355)
314 3ei3_A DNA damage-binding prot 96.5 1.1 3.8E-05 47.2 29.4 167 112-288 862-1058(1158)
315 3sre_A PON1, serum paraoxonase 96.4 0.52 1.8E-05 42.5 20.7 202 46-256 51-308 (355)
316 3a9g_A Putative uncharacterize 96.4 0.55 1.9E-05 42.4 24.5 229 44-280 28-330 (354)
317 3ott_A Two-component system se 96.2 1.2 4.1E-05 44.7 31.7 234 45-294 324-588 (758)
318 2vpj_A Kelch-like protein 12; 96.1 0.61 2.1E-05 40.7 24.5 229 55-294 14-280 (301)
319 2xn4_A Kelch-like protein 2; s 96.1 0.66 2.3E-05 40.5 23.6 228 56-294 16-278 (302)
320 3das_A Putative oxidoreductase 95.9 0.95 3.3E-05 40.6 26.6 229 40-280 27-326 (347)
321 1zgk_A Kelch-like ECH-associat 95.5 1.1 3.9E-05 39.2 20.9 231 54-294 23-289 (308)
322 3s25_A Hypothetical 7-bladed b 95.5 1.2 4.2E-05 39.1 20.8 125 152-294 88-218 (302)
323 3ii7_A Kelch-like protein 7; p 95.5 1.2 4.1E-05 38.9 23.8 227 57-294 13-274 (306)
324 2be1_A Serine/threonine-protei 95.4 0.28 9.7E-06 43.8 13.4 112 145-258 11-140 (339)
325 2ism_A Putative oxidoreductase 95.3 1.6 5.3E-05 39.3 25.5 66 89-162 32-115 (352)
326 2g8s_A Glucose/sorbosone dehyd 95.0 1.9 6.5E-05 38.8 26.3 239 45-291 18-351 (353)
327 3s25_A Hypothetical 7-bladed b 94.7 2.1 7E-05 37.6 21.1 158 114-293 88-256 (302)
328 1tl2_A L10, protein (tachylect 93.9 2.3 8E-05 35.2 16.7 148 134-294 41-210 (236)
329 1cru_A Protein (soluble quinop 93.6 4.6 0.00016 37.7 18.6 100 89-194 28-163 (454)
330 3sbq_A Nitrous-oxide reductase 93.6 1.7 5.8E-05 41.3 14.1 97 47-149 325-450 (638)
331 1tl2_A L10, protein (tachylect 93.3 0.72 2.4E-05 38.3 9.9 67 217-289 41-113 (236)
332 2vpj_A Kelch-like protein 12; 93.2 3.8 0.00013 35.5 21.6 188 55-250 62-280 (301)
333 3ii7_A Kelch-like protein 7; p 93.2 3.8 0.00013 35.5 19.1 189 55-250 55-274 (306)
334 3a9g_A Putative uncharacterize 93.2 4.5 0.00015 36.3 27.4 191 89-293 30-297 (354)
335 2uvk_A YJHT; unknown function, 92.7 5.2 0.00018 35.6 20.0 53 241-297 287-347 (357)
336 2zwa_A Leucine carboxyl methyl 91.9 11 0.00037 37.4 19.7 198 54-252 396-639 (695)
337 4asc_A Kelch repeat and BTB do 91.7 6.3 0.00022 34.4 22.5 227 59-294 8-279 (315)
338 3sbq_A Nitrous-oxide reductase 90.6 12 0.00042 35.7 20.9 97 180-281 328-454 (638)
339 1cru_A Protein (soluble quinop 90.1 12 0.00041 34.8 27.3 106 44-149 26-159 (454)
340 2uvk_A YJHT; unknown function, 87.0 16 0.00054 32.4 17.3 22 97-123 19-40 (357)
341 2woz_A Kelch repeat and BTB do 86.9 15 0.00051 31.9 21.4 227 58-294 18-289 (318)
342 2xn4_A Kelch-like protein 2; s 86.5 15 0.00051 31.6 19.1 188 55-250 61-278 (302)
343 2zwa_A Leucine carboxyl methyl 83.5 37 0.0013 33.5 18.9 178 114-294 412-637 (695)
344 3q6k_A 43.2 kDa salivary prote 83.3 26 0.00088 31.7 23.1 164 114-279 123-341 (381)
345 1zgk_A Kelch-like ECH-associat 82.3 23 0.0008 30.5 19.3 189 55-251 70-290 (308)
346 2g8s_A Glucose/sorbosone dehyd 81.4 29 0.00098 30.9 24.9 65 90-161 20-107 (353)
347 3das_A Putative oxidoreductase 81.2 29 0.001 30.8 28.8 67 90-161 34-116 (347)
348 3zwu_A Alkaline phosphatase PH 77.9 11 0.00037 36.4 9.6 58 220-279 479-548 (592)
349 4asc_A Kelch repeat and BTB do 75.9 38 0.0013 29.2 19.8 110 53-163 43-176 (315)
350 4a9v_A PHOX; hydrolase, beta-p 74.6 21 0.00071 34.2 10.3 60 218-279 477-548 (592)
351 3qhy_B Beta-lactamase inhibito 74.2 41 0.0014 28.8 14.2 220 46-292 25-246 (282)
352 2wg3_C Hedgehog-interacting pr 71.6 65 0.0022 29.9 14.4 55 217-272 14-79 (463)
353 2wg3_C Hedgehog-interacting pr 70.6 68 0.0023 29.8 14.7 103 177-282 16-159 (463)
354 3f7f_A Nucleoporin NUP120; nuc 62.0 45 0.0015 32.9 9.9 73 218-294 223-307 (729)
355 4gq2_M Nucleoporin NUP120; bet 58.0 48 0.0016 34.2 10.0 40 44-83 235-275 (950)
356 4gq2_M Nucleoporin NUP120; bet 55.8 17 0.00058 37.5 6.3 75 218-293 237-318 (950)
357 4gz8_A Semaphorin-3A; multi-do 52.7 91 0.0031 30.5 10.4 70 218-287 413-495 (667)
358 4fhn_B Nucleoporin NUP120; pro 51.9 21 0.00073 37.6 6.4 35 263-297 239-273 (1139)
359 2woz_A Kelch repeat and BTB do 50.9 1.2E+02 0.004 26.0 16.1 108 55-163 109-233 (318)
360 4fhn_B Nucleoporin NUP120; pro 47.4 18 0.00061 38.2 5.0 39 218-257 239-277 (1139)
361 3q6k_A 43.2 kDa salivary prote 40.8 2E+02 0.0069 25.8 21.8 83 43-130 85-197 (381)
362 3f7f_A Nucleoporin NUP120; nuc 39.2 98 0.0033 30.6 8.2 37 45-83 222-259 (729)
363 1zvt_A Topoisomerase IV subuni 38.0 1.5E+02 0.0052 24.8 8.5 32 262-293 84-115 (256)
364 1q47_A Semaphorin 3A; beta pro 36.9 74 0.0025 29.9 6.9 70 218-287 405-487 (495)
365 4d9s_A UVB-resistance protein 33.8 2.6E+02 0.0089 25.0 32.1 232 45-293 16-306 (406)
366 3kvp_A Uncharacterized protein 32.1 1E+02 0.0034 19.7 4.9 27 370-398 29-55 (72)
367 3qhy_B Beta-lactamase inhibito 30.8 2.4E+02 0.0083 23.8 14.8 181 46-248 64-246 (282)
368 3al9_A Plexin-A2; beta-propell 30.1 1.2E+02 0.0043 28.7 7.3 69 218-287 401-476 (539)
369 4hvt_A Ritya.17583.B, post-pro 30.0 4.1E+02 0.014 26.1 21.7 177 114-294 156-383 (711)
370 3elq_A Arylsulfate sulfotransf 29.8 3.7E+02 0.013 25.6 12.0 75 177-256 209-300 (571)
371 3no0_A DNA gyrase subunit A; D 26.3 2.9E+02 0.01 23.3 12.8 73 216-292 67-146 (276)
372 2zux_A YESW protein; beta-prop 25.8 4.4E+02 0.015 25.1 22.9 154 115-274 230-426 (591)
373 1olz_A Semaphorin 4D; developm 25.1 4.9E+02 0.017 25.4 11.2 70 218-287 398-477 (663)
374 3mvd_K Regulator of chromosome 22.2 4.2E+02 0.015 23.6 29.4 188 90-294 77-324 (423)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=304.57 Aligned_cols=284 Identities=14% Similarity=0.222 Sum_probs=244.5
Q ss_pred cccCCCCCCeEEEEEcCC----CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQD----YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~----g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
....+|.+.|++++|+|+ +.+|++|+ |+.|+||++..........+.+|...+.++.+++++..+++++.|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D---- 101 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD---- 101 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT----
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC----
Confidence 456789999999999985 67899999 999999999875554555567888999999999999999999988
Q ss_pred CCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceE
Q 015198 113 PTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSV 188 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (411)
+.|++||+.+++.+..+. +...+.+++|+|++.+++ .|+.|++||+++++....+..+.. .+.++.+++++.+
T Consensus 102 -~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~--~v~~~~~spdg~~ 178 (321)
T 3ow8_A 102 -AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK--FILSIAYSPDGKY 178 (321)
T ss_dssp -SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS--CEEEEEECTTSSE
T ss_pred -CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc--eEEEEEECCCCCE
Confidence 999999999999998887 788899999999999888 689999999999998888887766 4556666677788
Q ss_pred EEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEE
Q 015198 189 LACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSI 267 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l 267 (411)
|++ |+.||.|++|+.. ++.+..+.+|..+|.+++|+|++++|++++.|+. |++||+++++.+..+.+ |...|.++
T Consensus 179 las-g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~ 254 (321)
T 3ow8_A 179 LAS-GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLNV 254 (321)
T ss_dssp EEE-EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEEE
T ss_pred EEE-EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEEE
Confidence 876 6689999999875 4667788999999999999999999999999999 99999999999989888 88899999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccc
Q 015198 268 ALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFS 347 (411)
Q Consensus 268 ~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (411)
+|+|++++|++++.|++|+|||++++++..
T Consensus 255 ~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~-------------------------------------------------- 284 (321)
T 3ow8_A 255 AFCPDDTHFVSSSSDKSVKVWDVGTRTCVH-------------------------------------------------- 284 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEE--------------------------------------------------
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCEEEE--------------------------------------------------
Confidence 999999999999999999999999887543
Q ss_pred cccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEe
Q 015198 348 SEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFD 388 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~ 388 (411)
++.-+.+.+..++|+++ ..|++++.||.|++|+++
T Consensus 285 ------~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 285 ------TFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ------EECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ------EEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 22223346677899998 789999999999999864
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-40 Score=311.25 Aligned_cols=281 Identities=12% Similarity=0.175 Sum_probs=244.6
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|.++|++++|+|++++|++|+ |+.|+|||+.+.+.... +.+|...+.++.|++++.++++++.| +.|
T Consensus 102 ~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D-----~~i 174 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSAD-----MTI 174 (410)
T ss_dssp CEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCC
T ss_pred EeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCC-----CeE
Confidence 45679999999999999999999999 99999999998665443 44788889999999999999999988 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
++||+.+++++..+. |...|.+++|+|++.+++ .|+.|++||+++++++..+..|... +.++.+++++.+|++
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~--v~~~~~~~~g~~l~s- 251 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREW--VRMVRPNQDGTLIAS- 251 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECTTSSEEEE-
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCcc--EEEEEECCCCCEEEE-
Confidence 999999999998887 899999999999998777 6999999999999999999988774 455566667777775
Q ss_pred cCCCCeEEEEEcCC-cceEEEeccccceeEEEecCC--------------------CCEEEEEcCCCeEEEEEECCCCce
Q 015198 193 GLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLD--------------------GLLLATASTRGTLIRIFNTVDGTR 251 (411)
Q Consensus 193 g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~--------------------g~~l~s~s~dg~~I~vwd~~~~~~ 251 (411)
|+.|+.|++|+... .....+..|...|.+++|+|+ |.+|++|+.|+. |++||++++++
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~ 330 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMC 330 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEE
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCce
Confidence 66899999998754 566778899999999999996 679999999999 99999999999
Q ss_pred EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCC
Q 015198 252 LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANP 331 (411)
Q Consensus 252 ~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (411)
+..+.+ |...|.+++|+|+|++|++++.||.|++||+.+++...
T Consensus 331 ~~~~~~--h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~---------------------------------- 374 (410)
T 1vyh_C 331 LMTLVG--HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMK---------------------------------- 374 (410)
T ss_dssp EEEEEC--CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCE----------------------------------
T ss_pred EEEEEC--CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEE----------------------------------
Confidence 999988 88899999999999999999999999999998776542
Q ss_pred CCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEE
Q 015198 332 GSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSF 387 (411)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~ 387 (411)
.+..+...+..++|+++ ..|++++.||.|.+|.+
T Consensus 375 ----------------------~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 375 ----------------------TLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp ----------------------EEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred ----------------------EEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 33444456778999998 67888899999999975
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1e-38 Score=294.64 Aligned_cols=285 Identities=11% Similarity=0.064 Sum_probs=239.6
Q ss_pred CCccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 35 PQTAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 35 ~~~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
.....+.+|.+.|++++|+|++++|++|+ |+.|+|||+.+........ .+...+..+.|+|++.++++++.|
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~~~d----- 118 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP--LRSSWVMTCAYAPSGNYVACGGLD----- 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE--CSSSCEEEEEECTTSSEEEEEETT-----
T ss_pred hhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee--cCCccEEEEEECCCCCEEEEEeCC-----
Confidence 34456789999999999999999999999 9999999998866555443 567778899999999999999988
Q ss_pred CeEEEEECCCCc----EEEEEe-ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc
Q 015198 114 TKVIIWDDHQSR----CIGEFA-FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST 186 (411)
Q Consensus 114 ~~i~vwd~~~~~----~~~~~~-~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (411)
+.|++|++.+++ ....+. |...|.++.|++++.++. .|+.|++||+++++.+..+..|...+ .++.+++++
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~~~~~ 196 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDV--MSLSLAPDT 196 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECTTS
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCce--EEEEECCCC
Confidence 999999987753 344455 889999999999988766 79999999999999999998888754 455555666
Q ss_pred eEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceE
Q 015198 187 SVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIY 265 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~ 265 (411)
.++++ |+.|+.|++|+.. +.....+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+....+...|.
T Consensus 197 ~~l~s-g~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~ 274 (340)
T 1got_B 197 RLFVS-GACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGIT 274 (340)
T ss_dssp SEEEE-EETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEE
T ss_pred CEEEE-EeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceE
Confidence 77765 6689999999975 4567788999999999999999999999999999 9999999998887776433445799
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcc
Q 015198 266 SIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKY 345 (411)
Q Consensus 266 ~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (411)
+++|+|+|++|++|+.||.|++||+.+++...
T Consensus 275 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~------------------------------------------------ 306 (340)
T 1got_B 275 SVSFSKSGRLLLAGYDDFNCNVWDALKADRAG------------------------------------------------ 306 (340)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTCCEEE------------------------------------------------
T ss_pred EEEECCCCCEEEEECCCCeEEEEEcccCcEee------------------------------------------------
Confidence 99999999999999999999999998776432
Q ss_pred cccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEE
Q 015198 346 FSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCS 386 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~ 386 (411)
.+.-+.+.+..++|+++ ..|++++.||.|++|+
T Consensus 307 --------~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 307 --------VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp --------EEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --------EeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 33334456778899998 6788888999999994
No 4
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2e-38 Score=294.44 Aligned_cols=306 Identities=29% Similarity=0.387 Sum_probs=246.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
....|.+.|++++|+|||++|++|++..++||++++........+ +...++.+.+..+..++++++ + +.|++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-d-----~~v~i 85 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV-K-----EVVHI 85 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS-T-----TEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC-c-----cEEEE
Confidence 457899999999999999999999966789999998666555543 346667777777666555554 3 89999
Q ss_pred EECCCCcEEEEEeecCceeEEEEcCCeEEEEEcCeEEEEEcCCc-eeeEEEeccCCCcceEEEccCCCceEEEEe-cCCC
Q 015198 119 WDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDL-KLLHQIETLANLRGLCCLSHHSSTSVLACP-GLQR 196 (411)
Q Consensus 119 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~d 196 (411)
||+.+++.+..+.+...|.++.++++...++.++.|++||+.++ +.+..+.. +...+++++ .+++++ |+.+
T Consensus 86 Wd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----~~la~~sg~~~ 158 (355)
T 3vu4_A 86 WDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----GLLVYSNEFNL 158 (355)
T ss_dssp EETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET----TEEEEEESSCT
T ss_pred EECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc----cEEEEeCCCcC
Confidence 99999999999999999999999999988889999999999988 77766655 345666766 356665 8899
Q ss_pred CeEEEEEcCCcc-----------------eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC
Q 015198 197 GQVRIEHFGLNM-----------------IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV 259 (411)
Q Consensus 197 g~i~i~~~~~~~-----------------~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~ 259 (411)
|.|++|+..... +..+.+|...|.+++|+|+|++|++++.|+..|++||+++++.+..+..+.
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 999999987643 788899999999999999999999999999229999999999999998544
Q ss_pred CCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccc
Q 015198 260 DRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMR 339 (411)
Q Consensus 260 ~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (411)
|...|.+++|+|++++|++++.|++|+|||++.+...+ ...+..
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~----------------------------------~~~~~~-- 282 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK----------------------------------RHALKG-- 282 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC----------------------------------SEETTT--
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc----------------------------------cccccc--
Confidence 77899999999999999999999999999998865321 111111
Q ss_pred cccCcccccccceEEEEeCCCc---eEEEEEccC-CEEEEEEeCCcEEEEEEecCCCCcE
Q 015198 340 GVLPKYFSSEWSFAQFHIPEVT---HFIAAFGSQ-NTVVIVSMDGSFYRCSFDPVHGGEM 395 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~dg~~~~~~~~~~~~~~~ 395 (411)
.+++.++.+.|.++.+.++... ...++|+++ +.|++++.||.+++|.+...+.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~ 342 (355)
T 3vu4_A 283 WINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMER 342 (355)
T ss_dssp TEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTE
T ss_pred eeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCce
Confidence 1577888899999999988744 377899998 5788888899999999987555543
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=295.53 Aligned_cols=288 Identities=8% Similarity=0.039 Sum_probs=242.6
Q ss_pred CCCccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 34 HPQTAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 34 ~~~~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
+.....+.+|.+.|++++|+|++++|++|+ |+.|+|||..+........ .+...+..+.|+|++..+++++.|
T Consensus 54 ~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~--~~~~~v~~~~~sp~g~~lasg~~d---- 127 (354)
T 2pbi_B 54 MKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT--MPCTWVMACAYAPSGCAIACGGLD---- 127 (354)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSSCCCEEEECTTSSEEEEESTT----
T ss_pred cEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe--cCCCCEEEEEECCCCCEEEEeeCC----
Confidence 344456789999999999999999999999 9999999998766554443 566678889999999999999998
Q ss_pred CCeEEEEECCCC------cEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEcc
Q 015198 113 PTKVIIWDDHQS------RCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSH 182 (411)
Q Consensus 113 d~~i~vwd~~~~------~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (411)
+.+++|++... .....+. |...|.++.|+|++..++ .|+.|++||+++++.+..+..|...+..+.+++
T Consensus 128 -~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 128 -NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp -SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred -CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 99999997643 2234444 899999999999987666 699999999999999999999988888888888
Q ss_pred CCCceEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCC
Q 015198 183 HSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDR 261 (411)
Q Consensus 183 ~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~ 261 (411)
++++.+|++ |+.||.|++|+.. ++.+..+.+|...|.+++|+|++.+|++++.|+. |++||+++++.+..+....+.
T Consensus 207 ~~~g~~l~s-gs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~ 284 (354)
T 2pbi_B 207 SETGNTFVS-GGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESII 284 (354)
T ss_dssp CSSCCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCC
T ss_pred CCCCCEEEE-EeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcc
Confidence 877777775 6689999999865 5667788999999999999999999999999999 999999999888777654345
Q ss_pred cceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccc
Q 015198 262 AEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGV 341 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (411)
..+.+++|+|++++|++++.|+.|+|||+.+++...
T Consensus 285 ~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~-------------------------------------------- 320 (354)
T 2pbi_B 285 FGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS-------------------------------------------- 320 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE--------------------------------------------
T ss_pred cceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE--------------------------------------------
Confidence 578999999999999999999999999998876432
Q ss_pred cCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEE
Q 015198 342 LPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCS 386 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~ 386 (411)
.+.-+.+.+..++|+|+ ..|++++.||.|++|.
T Consensus 321 ------------~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 321 ------------ILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ------------EECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ------------EEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 22223356778899998 6788888899999994
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-38 Score=289.32 Aligned_cols=248 Identities=12% Similarity=0.141 Sum_probs=210.4
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....+|.+.|++++|+|++++|++|+ ||.|+|||+++....... ..+...+.++.|++++..+++++.| +.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~s~d-----~~ 78 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSI--QVTETPVRAGKFIARKNWIIVGSDD-----FR 78 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEEEGGGTEEEEEETT-----SE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEe--eccCCcEEEEEEeCCCCEEEEECCC-----CE
Confidence 345778999999999999999999999 999999999876554443 3677778899999999999999988 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCc-eeeEEEeccCCCcceEEEccCCCceEEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDL-KLLHQIETLANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 190 (411)
|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||++++ .....+..|...+..+++++. ++..|+
T Consensus 79 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~ 157 (304)
T 2ynn_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK-DPSTFA 157 (304)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTT-CTTEEE
T ss_pred EEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCC-CCCEEE
Confidence 9999999999999988 899999999999998887 6999999999877 555677788775555555442 334565
Q ss_pred EecCCCCeEEEEEcCC-cceEEE-eccccceeEEEecC--CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEE
Q 015198 191 CPGLQRGQVRIEHFGL-NMIKLI-NAHDSHIACFTLTL--DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYS 266 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~-~~~~~~-~~~~~~i~~l~~sp--~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~ 266 (411)
+ |+.|+.|++|+... .....+ ..|...+..+.|+| ++.+|++++.|+. |++||+++++++.++.+ |...|.+
T Consensus 158 s-gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~--h~~~v~~ 233 (304)
T 2ynn_A 158 S-GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSF 233 (304)
T ss_dssp E-EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEEC--CSSCEEE
T ss_pred E-EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCC--CCCCEEE
Confidence 4 67999999999754 333333 45678899999986 7789999999999 99999999999999998 8889999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 267 IALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 267 l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
++|+|++++|++++.||+|++||+++++..
T Consensus 234 ~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 234 AVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 999999999999999999999999988754
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=289.47 Aligned_cols=281 Identities=12% Similarity=0.084 Sum_probs=216.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCC----------CcceEEeecCCCCEEEEEEeccCCeEEEEecCCCC
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEP----------FKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS 109 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 109 (411)
...|...|.+++|+|||++|++++|+++++||... ........ ..+...+.++.|++++.++ +++.|
T Consensus 26 ~~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~d~~l~-~~s~d- 102 (344)
T 4gqb_B 26 PACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAG-VQTEAGVADLTWVGERGIL-VASDS- 102 (344)
T ss_dssp CSSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEE-EEESSCEEEEEEETTTEEE-EEETT-
T ss_pred cccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeee-eccCCCEEEEEEeCCCeEE-EEECC-
Confidence 34578889999999999999988888899987421 00000010 1234468889999987654 55666
Q ss_pred CCCCCeEEEEECCCCcEEEEEe-----ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEc
Q 015198 110 QYPPTKVIIWDDHQSRCIGEFA-----FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLS 181 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 181 (411)
|.|+|||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++++..+.+|...+..++++
T Consensus 103 ----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 103 ----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp ----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred ----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 999999999987654432 789999999999999888 69999999999999999999998866655555
Q ss_pred cCCCceEEEEecCCCCeEEEEEcCC-cceEEE--eccccceeEEEecCC-CCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 182 HHSSTSVLACPGLQRGQVRIEHFGL-NMIKLI--NAHDSHIACFTLTLD-GLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 182 ~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~--~~~~~~i~~l~~sp~-g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
++... +++ +|+.|+.|++|+... +....+ ..|...+.+++|+|+ +++|++|+.|+. |++||+++++++.++.+
T Consensus 179 ~~~~~-~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 179 PHKDS-VFL-SCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp SSCTT-EEE-EEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC
T ss_pred CCCCC-cee-eeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC
Confidence 54432 344 577899999998764 444444 345667899999985 568999999999 99999999999999998
Q ss_pred CCCCcceEEEEeCCCC-CEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCccc
Q 015198 258 GVDRAEIYSIALSPNV-QWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLS 336 (411)
Q Consensus 258 ~~~~~~v~~l~~spdg-~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (411)
|...|++++|+|++ ++|++++.|++|+|||+++++..
T Consensus 256 --h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~---------------------------------------- 293 (344)
T 4gqb_B 256 --HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF---------------------------------------- 293 (344)
T ss_dssp --CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE----------------------------------------
T ss_pred --CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE----------------------------------------
Confidence 88899999999998 57999999999999999877532
Q ss_pred ccccccCcccccccceEEEEeCCCceEEEEEccC-CE-EEEEEeCCcEEEEEEec
Q 015198 337 FMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NT-VVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~dg~~~~~~~~~ 389 (411)
.+.-+.+.+..++|+|+ +. |++++.||.|++|.++.
T Consensus 294 -----------------~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 294 -----------------RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp -----------------EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred -----------------EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 11222356778899997 44 55677899999999986
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=4.4e-37 Score=281.14 Aligned_cols=293 Identities=16% Similarity=0.221 Sum_probs=235.1
Q ss_pred ccccCCCCCCeEEEEEcCCC-CEEEEEe-CCcEEEEecCCCcce---EEeecCCCCEEEEEEeccCCeEEEEecCCCCCC
Q 015198 37 TAFSDVDEIELISVSWNQDY-GCFAAGT-SCGFRIYNCEPFKET---FRRDLKSGGFRIVEMLFRCNILALVGAGDNSQY 111 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g-~~la~g~-dg~i~iw~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~ 111 (411)
...+.+|.+.|++++|+|++ ++|++|+ |+.|++|++...... ....+.+|...+.++.|++++.++++++.|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D--- 86 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD--- 86 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC---
Confidence 34578999999999999975 8999999 999999998753322 223455788889999999999999999988
Q ss_pred CCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCC---
Q 015198 112 PPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHS--- 184 (411)
Q Consensus 112 ~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--- 184 (411)
++|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||++ ++.+..+..|...+..+.+.+..
T Consensus 87 --~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 87 --KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred --CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC
Confidence 999999999999999888 999999999999998887 69999999986 46777788887766666666543
Q ss_pred -CceEEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCc
Q 015198 185 -STSVLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRA 262 (411)
Q Consensus 185 -~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~ 262 (411)
++..+++ ++.|+.|++|+... +....+.+|...|.+++|+|+|++|++++.|+. |++||+.+++.+..+.. ..
T Consensus 164 ~~~~~l~s-~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~---~~ 238 (319)
T 3frx_A 164 DDSVTIIS-AGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA---QD 238 (319)
T ss_dssp --CCEEEE-EETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---CS
T ss_pred CCccEEEE-EeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC---CC
Confidence 2335554 67899999999765 456678899999999999999999999999999 99999999999988874 45
Q ss_pred ceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCccccccccc
Q 015198 263 EIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVL 342 (411)
Q Consensus 263 ~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (411)
.|.+++|+|++.+|++++.++ +++|+++.+........+ .
T Consensus 239 ~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~---------------------------------------~ 278 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPE---------------------------------------F 278 (319)
T ss_dssp CEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCC---------------------------------------C
T ss_pred cEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCcc---------------------------------------c
Confidence 799999999999999888665 999999876543211111 0
Q ss_pred CcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 343 PKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
..+ .+........++|+|+ +.|++++.||.|++|++..
T Consensus 279 ~~~---------~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 279 AGY---------SKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TTC---------CGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred ccc---------ccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 000 0001124556899999 7788888899999999875
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5e-37 Score=283.91 Aligned_cols=295 Identities=15% Similarity=0.160 Sum_probs=229.9
Q ss_pred cccCCCCC-CeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEee-cCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 38 AFSDVDEI-ELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRD-LKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 38 ~~~~~h~~-~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
..+.+|.+ .|++++|+|+|++||+|+ |+.|+||++++........ ..+|...+.++.|+|++.+|++++.| +
T Consensus 9 ~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~ 83 (345)
T 3fm0_A 9 GRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----A 83 (345)
T ss_dssp EEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred eeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----C
Confidence 45678887 999999999999999999 9999999998754332222 24788889999999999999999988 9
Q ss_pred eEEEEECCCCc--EEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCc---eeeEEEeccCCCcceEEEccCCC
Q 015198 115 KVIIWDDHQSR--CIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDL---KLLHQIETLANLRGLCCLSHHSS 185 (411)
Q Consensus 115 ~i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 185 (411)
.|++||+..+. ++..+. |...|.+++|+|++.+++ .|+.|++||++++ +.+..+..|...+ .++.++|+
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v--~~~~~~p~ 161 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDV--KHVVWHPS 161 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCE--EEEEECSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCe--EEEEECCC
Confidence 99999987764 456666 899999999999998888 6999999999765 3455666676644 45555666
Q ss_pred ceEEEEecCCCCeEEEEEcCCc---ceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC-------------
Q 015198 186 TSVLACPGLQRGQVRIEHFGLN---MIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG------------- 249 (411)
Q Consensus 186 ~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~------------- 249 (411)
+.+|++ |+.|+.|++|+.... ....+.+|...|.+++|+|+|++|++++.|+. |+|||....
T Consensus 162 ~~~l~s-~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 162 QELLAS-ASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SSCEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---C
T ss_pred CCEEEE-EeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCC
Confidence 667765 668999999987653 35678899999999999999999999999999 999996322
Q ss_pred --ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCC
Q 015198 250 --TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPST 327 (411)
Q Consensus 250 --~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (411)
+++..+.+. |...|.+++|+|++..|++++.|+.|++|+++.+.....
T Consensus 240 ~~~~~~~~~~~-h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~----------------------------- 289 (345)
T 3fm0_A 240 SWKCICTLSGF-HSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQ----------------------------- 289 (345)
T ss_dssp EEEEEEEECSS-CSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTS-----------------------------
T ss_pred ccceeEEecCC-CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcce-----------------------------
Confidence 233444433 677999999999999999999999999999987653210
Q ss_pred CCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC--CEEEEEEeCCcEEEEEEec
Q 015198 328 GANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ--NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~~~~~~~~~ 389 (411)
..+... ......+...+..++|+|+ ..|++++.||.|++|++..
T Consensus 290 -----~~~~~~-------------~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 290 -----PTFSLT-------------AHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp -----CCEEEE-------------EEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred -----eeEEEE-------------eeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 000000 0000122356788999997 4788888999999999986
No 10
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.9e-36 Score=278.52 Aligned_cols=296 Identities=16% Similarity=0.204 Sum_probs=226.2
Q ss_pred ccccCCCCCCeEEEEE-----cC-CCCEEEEEe-CCcEEEEecCCCcc-----eEEeecCCCCEEEEEEeccCCeEEEEe
Q 015198 37 TAFSDVDEIELISVSW-----NQ-DYGCFAAGT-SCGFRIYNCEPFKE-----TFRRDLKSGGFRIVEMLFRCNILALVG 104 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~-----s~-~g~~la~g~-dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~s 104 (411)
...+.+|.+.|++++| ++ ++++|++|+ |+.|+||++...+. .....+.+|...+.++.|++++.++++
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 3457899999999999 76 899999999 99999999975321 223345678888999999999999999
Q ss_pred cCCCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEe---ccCCCcce
Q 015198 105 AGDNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIE---TLANLRGL 177 (411)
Q Consensus 105 ~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~---~~~~~~~~ 177 (411)
++.| ++|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+... ...... .|...+..
T Consensus 94 ~s~D-----~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~ 167 (343)
T 2xzm_R 94 SSWD-----KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSC 167 (343)
T ss_dssp EETT-----SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEE
T ss_pred EcCC-----CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeee
Confidence 9988 999999999999999887 999999999999998777 6999999999743 332322 34444444
Q ss_pred EEEccCCC--------ceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECC-C
Q 015198 178 CCLSHHSS--------TSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTV-D 248 (411)
Q Consensus 178 ~~~~~~~~--------~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~-~ 248 (411)
+.+++... +.++++ ++.|+.|++|+........+.+|...|.+++|+|+|++|++|+.|+. |++||+. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~ 245 (343)
T 2xzm_R 168 VRYSPIMKSANKVQPFAPYFAS-VGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNL 245 (343)
T ss_dssp EEECCCCCSCSCCCSSCCEEEE-EETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCC
T ss_pred eeeccccccccccCCCCCEEEE-EcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCC
Confidence 44444321 146665 66899999999888888889999999999999999999999999999 9999994 4
Q ss_pred CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCC--CCCCCCCCCCcccccccCCCCCccccCCC
Q 015198 249 GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGE--DSSSSLSTPSQSTELLNHSSSFDTLISPS 326 (411)
Q Consensus 249 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (411)
......+. +...|.+++|+|++++|+++ .|+.|++|++.+++... ....+
T Consensus 246 ~~~~~~~~---~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~------------------------ 297 (343)
T 2xzm_R 246 TYPQREFD---AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAE------------------------ 297 (343)
T ss_dssp SSCSEEEE---CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCC------------------------
T ss_pred cccceeec---CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecC------------------------
Confidence 44455554 34469999999999988755 57779999998876432 00000
Q ss_pred CCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 327 TGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
. +... ...+-....+..++|+++ ..|++++.||.|++|.+..
T Consensus 298 ----~----------~~~~-------~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 298 ----P----------ITKA-------EGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp ----S----------GGGB-------TTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred ----c----------chhh-------hhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 0 0000 000011234567899998 7788889999999999874
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-37 Score=289.41 Aligned_cols=282 Identities=13% Similarity=0.107 Sum_probs=214.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-------CCcEEEEecCCCcce--EEeecCCCCEEEEEEeccCCeEEEEecCCCCC
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-------SCGFRIYNCEPFKET--FRRDLKSGGFRIVEMLFRCNILALVGAGDNSQ 110 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-------dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 110 (411)
...|+..|++++|+|||++||+|+ |+.|++|+..+.... +......+...+.++.|++++.+++++. |
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~-d-- 114 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASD-S-- 114 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEET-T--
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEEC-C--
Confidence 457999999999999999999998 356788877543221 1111125667799999999988776654 4
Q ss_pred CCCCeEEEEECCCCcEEEEE-----eecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEcc
Q 015198 111 YPPTKVIIWDDHQSRCIGEF-----AFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSH 182 (411)
Q Consensus 111 ~~d~~i~vwd~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (411)
+.|+|||+.+++..... .|...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..+++++
T Consensus 115 ---g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 115 ---GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp ---SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred ---CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 99999999888654322 3788999999999998887 699999999999999999999888666666665
Q ss_pred CCCceEEEEecCCCCeEEEEEcCC-cceEEE--eccccceeEEEecCCC-CEEEEEcCCCeEEEEEECCCCceEEEEeCC
Q 015198 183 HSSTSVLACPGLQRGQVRIEHFGL-NMIKLI--NAHDSHIACFTLTLDG-LLLATASTRGTLIRIFNTVDGTRLQEVRRG 258 (411)
Q Consensus 183 ~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~--~~~~~~i~~l~~sp~g-~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~ 258 (411)
+.+. +++ +++.||.|++|+... +....+ ..|...+.+++|+|++ .+|++|+.|+. |++||+++++.+..+..
T Consensus 192 ~~~~-~~~-s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~~- 267 (357)
T 4g56_B 192 GKDT-IFL-SCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSAV- 267 (357)
T ss_dssp TCSS-CEE-EEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEECC-
T ss_pred CCCc-eee-eeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEec-
Confidence 5443 333 466899999998754 333333 4567789999999974 68999999999 99999999999999988
Q ss_pred CCCcceEEEEeCCCC-CEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccc
Q 015198 259 VDRAEIYSIALSPNV-QWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSF 337 (411)
Q Consensus 259 ~~~~~v~~l~~spdg-~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (411)
|...|++++|+|++ ++|++++.|++|+|||+++++.....
T Consensus 268 -~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-------------------------------------- 308 (357)
T 4g56_B 268 -HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-------------------------------------- 308 (357)
T ss_dssp -CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC--------------------------------------
T ss_pred -cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC--------------------------------------
Confidence 78899999999987 57999999999999999887643211
Q ss_pred cccccCcccccccceEEEEeCCCceEEEEEcc-C-CEEEEEEeCCcEEEEEEec
Q 015198 338 MRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS-Q-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~dg~~~~~~~~~ 389 (411)
-+.+.+..++|+| + ..|++++.||.|++|.+..
T Consensus 309 -------------------~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 309 -------------------SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp -------------------CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred -------------------CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 1224567789998 4 6788899999999999976
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-36 Score=282.70 Aligned_cols=280 Identities=13% Similarity=0.135 Sum_probs=225.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecC----------------CCCEEEEEEeccCCeEEEEec
Q 015198 42 VDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLK----------------SGGFRIVEMLFRCNILALVGA 105 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~l~s~ 105 (411)
+|.+.|.+++|+|||++||+|+++.++||++.++........+ .+...+.++.|++++..++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 6999999999999999999998999999999876554333211 112247889999999999999
Q ss_pred CCCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEc
Q 015198 106 GDNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLS 181 (411)
Q Consensus 106 ~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 181 (411)
+.| +.|++||+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+++++....+..+. .+.++.
T Consensus 142 ~~d-----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~---~v~~~~ 213 (393)
T 1erj_A 142 AED-----RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED---GVTTVA 213 (393)
T ss_dssp ETT-----SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---CEEEEE
T ss_pred cCC-----CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC---CcEEEE
Confidence 988 999999999999988887 899999999999998877 69999999999999887776443 344455
Q ss_pred cCC-CceEEEEecCCCCeEEEEEcCCc-ceEEE-------eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC---
Q 015198 182 HHS-STSVLACPGLQRGQVRIEHFGLN-MIKLI-------NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG--- 249 (411)
Q Consensus 182 ~~~-~~~~l~~~g~~dg~i~i~~~~~~-~~~~~-------~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~--- 249 (411)
+++ ++.+|++ |+.|+.|++|+.... .+..+ .+|...|.+++|+|+|++|++++.|+. |++||+++.
T Consensus 214 ~~~~~~~~l~~-~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~~~~ 291 (393)
T 1erj_A 214 VSPGDGKYIAA-GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNANNK 291 (393)
T ss_dssp ECSTTCCEEEE-EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC------
T ss_pred EECCCCCEEEE-EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCCCCc
Confidence 555 5566665 678999999987653 34444 578999999999999999999999999 999999763
Q ss_pred ---------ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCc
Q 015198 250 ---------TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFD 320 (411)
Q Consensus 250 ---------~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
.+...+.+ |...|.+++|+|++++|++++.|+.|++||+.+++...
T Consensus 292 ~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~----------------------- 346 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIG--HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL----------------------- 346 (393)
T ss_dssp ---------CEEEEEEC--CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE-----------------------
T ss_pred ccccCCCCCcceEEEec--ccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE-----------------------
Confidence 34456666 78899999999999999999999999999998876432
Q ss_pred cccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEcc------C-CEEEEEEeCCcEEEEEEec
Q 015198 321 TLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS------Q-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.++-+...+..++|++ + +.|++++.||.+++|++..
T Consensus 347 ---------------------------------~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 347 ---------------------------------MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp ---------------------------------EEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred ---------------------------------EECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 2333344566677765 4 5688888899999999875
No 13
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.6e-36 Score=272.74 Aligned_cols=285 Identities=13% Similarity=0.210 Sum_probs=231.9
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....+|.+.|++++|+|++++|++|+ |+.|++|+..+.+... .+..|...+.++.|++++..+++++.| +.
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~~~d-----~~ 88 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKLGISDVAWSSDSNLLVSASDD-----KT 88 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch--hhccCCCceEEEEEcCCCCEEEEECCC-----CE
Confidence 345689999999999999999999999 9999999998755433 344788889999999999999999988 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
|++||+.+++.+..+. |...|.++.|+|++.+++ .|+.|++||+++++.+..+..|..++. ++.+++++.++++
T Consensus 89 i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~--~~~~~~~~~~l~~ 166 (312)
T 4ery_A 89 LKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVS--AVHFNRDGSLIVS 166 (312)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE--EEEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEE--EEEEcCCCCEEEE
Confidence 9999999999999988 899999999999998887 699999999999999999988877554 4555556667765
Q ss_pred ecCCCCeEEEEEcCC-cceEEE-eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcc-eEEEE
Q 015198 192 PGLQRGQVRIEHFGL-NMIKLI-NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAE-IYSIA 268 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~-~~~~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~-v~~l~ 268 (411)
|+.||.|++|+... +.+..+ ..+...+..++|+|++++|++++.|+. |++||+++++.+..+..+..... +....
T Consensus 167 -~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 244 (312)
T 4ery_A 167 -SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANF 244 (312)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEE
T ss_pred -EeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEE
Confidence 66899999999765 344444 356678999999999999999999999 99999999999988887432222 22333
Q ss_pred eCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCccccc
Q 015198 269 LSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSS 348 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (411)
..+++.+|++++.||.|++||+++++...
T Consensus 245 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~--------------------------------------------------- 273 (312)
T 4ery_A 245 SVTGGKWIVSGSEDNLVYIWNLQTKEIVQ--------------------------------------------------- 273 (312)
T ss_dssp ECSSSCEEEECCTTSCEEEEETTTCCEEE---------------------------------------------------
T ss_pred EeCCCcEEEEECCCCEEEEEECCCchhhh---------------------------------------------------
Confidence 34688999999999999999998876442
Q ss_pred ccceEEEEeCCCceEEEEEccC-CEEEEEE--eCCcEEEEEEe
Q 015198 349 EWSFAQFHIPEVTHFIAAFGSQ-NTVVIVS--MDGSFYRCSFD 388 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~dg~~~~~~~~ 388 (411)
.++-+.+.+..++|+++ +.+++++ .||.|++|+.+
T Consensus 274 -----~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 274 -----KLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp -----EECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred -----hhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 23333456778899998 5555555 49999999875
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.5e-37 Score=289.82 Aligned_cols=289 Identities=15% Similarity=0.163 Sum_probs=229.1
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
..+.+|.+.|++++|+|++++|++|+ |+.|+|||+.+.+...... .|...+.++.|+|++..+++++.| +.+
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~--~h~~~v~~~~~s~~g~~las~~~d-----~~v 132 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK--LHCPWVMECAFAPNGQSVACGGLD-----SAC 132 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE--CCCTTCCCCEECTTSSEEEECCSS-----SCC
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe--cCCCCEEEEEECCCCCEEEEeeCC-----CcE
Confidence 45789999999999999999999999 9999999998866554443 566678888999999999999998 999
Q ss_pred EEEECCCCc-------EEEEEe-ecCceeEEEEcCCe-E-EEE--EcCeEEEEEcCCceeeEEE-----eccCCCcceEE
Q 015198 117 IIWDDHQSR-------CIGEFA-FRSDVRSVKLSRDR-I-VVV--LEHKIYVYSFVDLKLLHQI-----ETLANLRGLCC 179 (411)
Q Consensus 117 ~vwd~~~~~-------~~~~~~-~~~~i~~~~~~~~~-~-~~~--~dg~i~iwd~~~~~~~~~~-----~~~~~~~~~~~ 179 (411)
++||+.+.. ....+. |...|.++.|.|++ . ++. .|+.|++||+++++.+..+ ..|.. .+.+
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~--~v~~ 210 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA--DVLS 210 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS--CEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc--CeEE
Confidence 999986532 223333 78899999999864 2 333 7999999999999988877 33444 4455
Q ss_pred EccCC-CceEEEEecCCCCeEEEEEcC--CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEe
Q 015198 180 LSHHS-STSVLACPGLQRGQVRIEHFG--LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 180 ~~~~~-~~~~l~~~g~~dg~i~i~~~~--~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~ 256 (411)
+.+++ ++.+++ +|+.|+.|++|+.. ...+..+.+|...|.+++|+|++++|++++.|+. |++||+++++.+..+.
T Consensus 211 ~~~~~~~~~~l~-sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 211 LSINSLNANMFI-SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEECSSSCCEEE-EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEEC
T ss_pred EEeecCCCCEEE-EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEec
Confidence 55544 445555 47799999999975 4677888999999999999999999999999999 9999999999988876
Q ss_pred CCCC-----CcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCC
Q 015198 257 RGVD-----RAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANP 331 (411)
Q Consensus 257 ~~~~-----~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (411)
.... ...|.+++|+|+|++|++|+.||.|++||+.+++........
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~----------------------------- 339 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL----------------------------- 339 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS-----------------------------
T ss_pred ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc-----------------------------
Confidence 5321 124899999999999999999999999999877643210000
Q ss_pred CCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 332 GSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
..-+.+.+..++|+++ ..|++++.||.+++|.+..
T Consensus 340 -----------------------~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 340 -----------------------QNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp -----------------------CSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred -----------------------cCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 0012245667899998 6778888899999999874
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.6e-36 Score=296.84 Aligned_cols=289 Identities=12% Similarity=0.099 Sum_probs=224.2
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec-----CCCCEEEEEEeccCCeEEEEecCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL-----KSGGFRIVEMLFRCNILALVGAGDNSQY 111 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~s~~~d~~~ 111 (411)
....+|.+.|++++|+|+|++|++|+ |+.|+|||+.+.+....... ..|...+.++.|+|++..+++++.|
T Consensus 184 ~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D--- 260 (611)
T 1nr0_A 184 STFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD--- 260 (611)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT---
T ss_pred eeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC---
Confidence 34678999999999999999999999 99999999987554332210 1577889999999999999999988
Q ss_pred CCCeEEEEECCCCcEEEEE-------------------------------------------e-ecCceeEEEEcCCeEE
Q 015198 112 PPTKVIIWDDHQSRCIGEF-------------------------------------------A-FRSDVRSVKLSRDRIV 147 (411)
Q Consensus 112 ~d~~i~vwd~~~~~~~~~~-------------------------------------------~-~~~~i~~~~~~~~~~~ 147 (411)
++|++||+.+++++..+ . |...|.+++|+|++.+
T Consensus 261 --~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 261 --KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred --CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence 99999999888765443 2 6678999999999998
Q ss_pred EE---EcCeEEEEEcCCceeeEEE-eccCC--------------------------------------------------
Q 015198 148 VV---LEHKIYVYSFVDLKLLHQI-ETLAN-------------------------------------------------- 173 (411)
Q Consensus 148 ~~---~dg~i~iwd~~~~~~~~~~-~~~~~-------------------------------------------------- 173 (411)
++ .|+.|++||+.+++....+ ..|..
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLA 418 (611)
T ss_dssp EEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEE
T ss_pred EEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEE
Confidence 88 6999999999776543221 00000
Q ss_pred -----------------------------CcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceE--EEeccccceeEE
Q 015198 174 -----------------------------LRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIK--LINAHDSHIACF 222 (411)
Q Consensus 174 -----------------------------~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~--~~~~~~~~i~~l 222 (411)
...+.+++++|++.+|++ |+.|+.|++|+....... ...+|...|+++
T Consensus 419 ~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~las-gs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v 497 (611)
T 1nr0_A 419 VSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAV-GGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 497 (611)
T ss_dssp ECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEE-EETTSEEEEEEEETTEEEEEEEEECSSCEEEE
T ss_pred EeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEE-eCCCCeEEEEEccCCceeeeeccCCCCceEEE
Confidence 012345667778888876 668999999998764332 226799999999
Q ss_pred EecCCCCEEEEEcCCCeEEEEEECCC-CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCC
Q 015198 223 TLTLDGLLLATASTRGTLIRIFNTVD-GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSS 301 (411)
Q Consensus 223 ~~sp~g~~l~s~s~dg~~I~vwd~~~-~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~ 301 (411)
+|+|+|++|++++.|+. |++||+.+ ++.+.......|...|.+++|+|||++|++++.|++|+|||++++++..
T Consensus 498 ~fspdg~~las~s~d~~-v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~---- 572 (611)
T 1nr0_A 498 AFSNNGAFLVATDQSRK-VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHP---- 572 (611)
T ss_dssp EECTTSSEEEEEETTSC-EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCC----
T ss_pred EECCCCCEEEEEcCCCC-EEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccccc----
Confidence 99999999999999999 99999987 5544331112278899999999999999999999999999998765321
Q ss_pred CCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeC-CCceEEEEEccCCEEEEEEeCC
Q 015198 302 SLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIP-EVTHFIAAFGSQNTVVIVSMDG 380 (411)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dg 380 (411)
......+ .+.+..++|+++++|++++.||
T Consensus 573 --------------------------------------------------~~~~~~h~~~~v~~v~fs~d~~l~s~~~D~ 602 (611)
T 1nr0_A 573 --------------------------------------------------IIIKGAHAMSSVNSVIWLNETTIVSAGQDS 602 (611)
T ss_dssp --------------------------------------------------EEETTSSTTSCEEEEEEEETTEEEEEETTS
T ss_pred --------------------------------------------------chhhccCcccCeeEEEEcCCCEEEEecCCC
Confidence 0000011 2456778999998899999999
Q ss_pred cEEEEEE
Q 015198 381 SFYRCSF 387 (411)
Q Consensus 381 ~~~~~~~ 387 (411)
.|++|++
T Consensus 603 ~i~lW~~ 609 (611)
T 1nr0_A 603 NIKFWNV 609 (611)
T ss_dssp CEEEEEC
T ss_pred CEEEEec
Confidence 9999987
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-35 Score=270.49 Aligned_cols=284 Identities=12% Similarity=0.126 Sum_probs=240.0
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
..+.+|.+.|++++|+|++++|++|+ |+.|++||+.+.+.... +..|...+.++.|++++..+++++.| +.|
T Consensus 26 ~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i 98 (369)
T 3zwl_B 26 IKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSI 98 (369)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEE
T ss_pred EEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeE
Confidence 34789999999999999999999999 99999999987655443 44788889999999999999998888 999
Q ss_pred EEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---Ec-----CeEEEEEcCCce-----------eeEEEeccCCCcce
Q 015198 117 IIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LE-----HKIYVYSFVDLK-----------LLHQIETLANLRGL 177 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d-----g~i~iwd~~~~~-----------~~~~~~~~~~~~~~ 177 (411)
++||+.+++.+..+.+...+.+++|+|++.+++ .+ +.|++||+...+ .+..+..+.....+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAA 178 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCE
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccce
Confidence 999999999999999999999999999998888 45 899999996543 33344444443356
Q ss_pred EEEccCCCceEEEEecCCCCeEEEEEcCC--cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEE
Q 015198 178 CCLSHHSSTSVLACPGLQRGQVRIEHFGL--NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEV 255 (411)
Q Consensus 178 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~ 255 (411)
.++.+++++.+|++ ++.||.|++|+... ..+..+..|...|.+++|+|++++|++++.|+. |++||+++++.+..+
T Consensus 179 ~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 179 TVAGWSTKGKYIIA-GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEEEECGGGCEEEE-EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred eEEEEcCCCCEEEE-EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeee
Confidence 66677777778776 56899999999875 667788899999999999999999999999999 999999999999888
Q ss_pred eCCCCCcceEEEEeCCCCCEEEEEeCCC--------------cEEEEEccccccCCCCCCCCCCCCcccccccCCCCCcc
Q 015198 256 RRGVDRAEIYSIALSPNVQWLAVASDKG--------------TVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDT 321 (411)
Q Consensus 256 ~~~~~~~~v~~l~~spdg~~l~s~s~dg--------------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (411)
. +...+..++|+|+++++++++.++ .+++||+.+++..
T Consensus 257 ~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------------------------- 308 (369)
T 3zwl_B 257 E---TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI------------------------- 308 (369)
T ss_dssp E---CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE-------------------------
T ss_pred c---CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch-------------------------
Confidence 7 566899999999999999999998 7888888777643
Q ss_pred ccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 322 LISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
..+..+...+..++|+++ +.|++++.||.|++|.+..
T Consensus 309 -------------------------------~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 309 -------------------------------GRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp -------------------------------EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred -------------------------------hheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 234444567778999998 6788888899999999985
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=271.93 Aligned_cols=240 Identities=15% Similarity=0.200 Sum_probs=213.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|...|.+++|++++.++++++ |+.|++||+.+.+...... .+...+..+.|+|++..+++++.+ +.|+
T Consensus 75 ~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~g~~d-----g~v~ 147 (321)
T 3ow8_A 75 SLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID--AGPVDAWTLAFSPDSQYLATGTHV-----GKVN 147 (321)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE--CCTTCCCCEEECTTSSEEEEECTT-----SEEE
T ss_pred eeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe--CCCccEEEEEECCCCCEEEEEcCC-----CcEE
Confidence 4679999999999999999999999 9999999999866544433 566677788999999999999988 9999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
+||+.+++....+. +...|.+++|+|++.+++ .|+.|++||+++++.+..+..|..++..++++ +++.+|++ |
T Consensus 148 i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s--pd~~~l~s-~ 224 (321)
T 3ow8_A 148 IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFS--PDSQLLVT-A 224 (321)
T ss_dssp EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEEC--TTSCEEEE-E
T ss_pred EEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEc--CCCCEEEE-E
Confidence 99999999988887 788899999999999888 69999999999999999999888766655555 45667765 6
Q ss_pred CCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 194 LQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 194 ~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
+.|+.|++|+... .....+.+|...|.+++|+|++++|++++.|+. |++||+.+++++.++.. |...|.+++|+|+
T Consensus 225 s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~ 301 (321)
T 3ow8_A 225 SDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFD--HQDQVWGVKYNGN 301 (321)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTT
T ss_pred cCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcC--CCCcEEEEEECCC
Confidence 7899999998764 567788899999999999999999999999999 99999999999999987 8889999999999
Q ss_pred CCEEEEEeCCCcEEEEEcc
Q 015198 273 VQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~ 291 (411)
+++|++++.||.|+|||+.
T Consensus 302 g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 302 GSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred CCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999963
No 18
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.5e-36 Score=276.94 Aligned_cols=244 Identities=13% Similarity=0.113 Sum_probs=198.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEE--eecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFR--RDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
.|...|.+++|+|++ .|++|+ ||.|+|||+++.+.... ..+.+|...|.++.|++++..+++++.| +.|++
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~i 153 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKV 153 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEE
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEE
Confidence 356789999999996 566777 99999999987665433 2334788889999999999999999988 99999
Q ss_pred EECCCCcEEEEEe-ecCceeEEEEcCCeE-EEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 119 WDDHQSRCIGEFA-FRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 119 wd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
||+.+++++..+. |...|.+++|++++. +++ .|+.|++||+++++....+..+.....+.++.+++++..++++|
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 9999999999998 999999999999874 343 69999999999999888875544444556666666443333457
Q ss_pred CCCCeEEEEEcC-CcceEEEeccccceeEEEecCCC-CEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCC
Q 015198 194 LQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDG-LLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP 271 (411)
Q Consensus 194 ~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g-~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp 271 (411)
+.||.|++|+.. ++.+..+.+|...|++++|+|++ ++|++|+.|+. |+|||+.+++++ .+.+ |...|++++|+|
T Consensus 234 ~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~-~~~~--H~~~V~~v~~sp 309 (344)
T 4gqb_B 234 DENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELF-RSQA--HRDFVRDATWSP 309 (344)
T ss_dssp ETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEE-EECC--CSSCEEEEEECS
T ss_pred ccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEE-EEcC--CCCCEEEEEEeC
Confidence 799999999865 57788899999999999999998 58999999999 999999888765 4555 888999999999
Q ss_pred CCC-EEEEEeCCCcEEEEEcccccc
Q 015198 272 NVQ-WLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 272 dg~-~l~s~s~dg~I~vwd~~~~~~ 295 (411)
+++ +|++++.|++|++|++.+...
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 986 577999999999999987643
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-35 Score=270.47 Aligned_cols=286 Identities=14% Similarity=0.168 Sum_probs=215.5
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec-CC-CCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL-KS-GGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
...+.+|.+.|++++|+|+ +|++|+ |+.|+||++..........+ .. |...+.++.|+|++.++++++.|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D----- 79 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD----- 79 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----
Confidence 3457799999999999998 999999 99999999986433232223 23 77789999999999999999988
Q ss_pred CeEEEEECCC-------CcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCC----ceeeEEEeccCCCcceE
Q 015198 114 TKVIIWDDHQ-------SRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVD----LKLLHQIETLANLRGLC 178 (411)
Q Consensus 114 ~~i~vwd~~~-------~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~ 178 (411)
+.|++||+.. .+.+..+. |...|.+++|+|++.+++ .|+.|++||++. .+++..+..|...+ .
T Consensus 80 ~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v--~ 157 (330)
T 2hes_X 80 STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDV--K 157 (330)
T ss_dssp SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCE--E
T ss_pred CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCce--E
Confidence 9999999853 34556666 899999999999999888 699999999943 25667777777744 4
Q ss_pred EEccCCCceEEEEecCCCCeEEEEEcCC---cceEEEeccccceeEEEecCC--CCEEEEEcCCCeEEEEEECCCC----
Q 015198 179 CLSHHSSTSVLACPGLQRGQVRIEHFGL---NMIKLINAHDSHIACFTLTLD--GLLLATASTRGTLIRIFNTVDG---- 249 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~dg~i~i~~~~~---~~~~~~~~~~~~i~~l~~sp~--g~~l~s~s~dg~~I~vwd~~~~---- 249 (411)
++.++|++.+|++ |+.|+.|++|+... +++..+.+|...|.+++|+|+ +.+|++++.|+. |++||+..+
T Consensus 158 ~v~~~p~~~~l~s-~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~ 235 (330)
T 2hes_X 158 HVIWHPSEALLAS-SSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDD 235 (330)
T ss_dssp EEEECSSSSEEEE-EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTS
T ss_pred EEEECCCCCEEEE-EcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCccc
Confidence 5555556677775 66899999998653 467788999999999999998 779999999999 999998654
Q ss_pred ----ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCC
Q 015198 250 ----TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISP 325 (411)
Q Consensus 250 ----~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (411)
.....+.. .|...|.+++|++++ +|++++.||.|+|||+.+++...
T Consensus 236 ~~~~~~~~~~~~-~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~---------------------------- 285 (330)
T 2hes_X 236 QQEWVCEAILPD-VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV---------------------------- 285 (330)
T ss_dssp CEEEEEEEECCS-CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE----------------------------
T ss_pred cceeEEeeeccc-ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE----------------------------
Confidence 23333332 277899999999765 79999999999999987653110
Q ss_pred CCCCCCCCcccccccccCcccccccceEEE-EeCCC-ceEEEEEcc--C-CEEEEEEeCCcEEEEEEec
Q 015198 326 STGANPGSSLSFMRGVLPKYFSSEWSFAQF-HIPEV-THFIAAFGS--Q-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~--~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+... ..+.. .+..++|++ + ..|++++.||.|++|++..
T Consensus 286 --------------------------~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 286 --------------------------FAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --------------------------EEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred --------------------------EeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 0000 01112 456788988 4 5688899999999998764
No 20
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-35 Score=280.35 Aligned_cols=244 Identities=12% Similarity=0.226 Sum_probs=215.3
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....+|.+.|.+++|+|++++|++|+ |+.|+|||+.+.+.. ..+.+|...+.++.|+|++..+++++.| +.
T Consensus 143 ~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~--~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~ 215 (410)
T 1vyh_C 143 ERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI--RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KT 215 (410)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE--ECCCCCSSCEEEEEECSSSSEEEEEETT-----SE
T ss_pred EEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee--EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----Ce
Confidence 345678999999999999999999999 999999999875543 3355788889999999999999999988 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCC------
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSS------ 185 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 185 (411)
|++||+.+++++..+. |...|.++.+++++.+++ .|+.|++||+.+++....+..|...+..++++++..
T Consensus 216 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 295 (410)
T 1vyh_C 216 IKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISE 295 (410)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGG
T ss_pred EEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhh
Confidence 9999999999999988 899999999999998887 699999999999999999988888766666665421
Q ss_pred ------------ceEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceE
Q 015198 186 ------------TSVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRL 252 (411)
Q Consensus 186 ------------~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~ 252 (411)
+.+|++ |+.|+.|++|+.. +..+..+.+|...|.+++|+|+|++|++++.|+. |++||+.+++++
T Consensus 296 ~~~~~~~~~~~~g~~l~s-gs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~ 373 (410)
T 1vyh_C 296 ATGSETKKSGKPGPFLLS-GSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCM 373 (410)
T ss_dssp CCSCC-------CCEEEE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCC
T ss_pred hccccccccCCCCCEEEE-EeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceE
Confidence 456654 7799999999965 5677888999999999999999999999999999 999999999999
Q ss_pred EEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 253 QEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 253 ~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
..+.. |...|++++|+|++.+|++|+.||+|+||+++
T Consensus 374 ~~~~~--h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 374 KTLNA--HEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEEC--CSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEcC--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99988 88899999999999999999999999999864
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-34 Score=286.06 Aligned_cols=275 Identities=17% Similarity=0.245 Sum_probs=234.8
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++++ |+.|++|+.... .... +..+...+.++.|+|++..+++++.+ +.|
T Consensus 297 ~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~--~~~~~~~v~~~~~s~~g~~l~~~~~d-----g~v 368 (577)
T 2ymu_A 297 QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQT--LTGHSSSVWGVAFSPDGQTIASASDD-----KTV 368 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEE
T ss_pred EEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEE--EeCCCCCEEEEEECCCCCEEEEEeCC-----CEE
Confidence 44678999999999999999999999 999999998753 2222 34677888999999999999999888 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||. +++.+..+..|...+ .++.+++++.+|++
T Consensus 369 ~~~~-~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v--~~~~~s~d~~~l~~- 443 (577)
T 2ymu_A 369 KLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV--WGVAFSPDDQTIAS- 443 (577)
T ss_dssp EEEE-TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCE--EEEEECTTSSEEEE-
T ss_pred EEEc-CCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCe--EEEEECCCCCEEEE-
Confidence 9999 5677777777 899999999999998887 6899999995 567888888887754 45555666677776
Q ss_pred cCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 193 GLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 193 g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
++.|+.|++|+.+++.+..+.+|...|.+++|+|++++|++++.|+. |++||. +++.+..+.+ |...|++++|+||
T Consensus 444 ~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~d 519 (577)
T 2ymu_A 444 ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPD 519 (577)
T ss_dssp EETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTT
T ss_pred EcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEcC-CCCEEEEEeC--CCCCEEEEEEcCC
Confidence 56899999999999999999999999999999999999999999999 999995 7888999988 8889999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
|++|++++.||.|+|||. +++..
T Consensus 520 g~~l~s~~~dg~v~lwd~-~~~~~-------------------------------------------------------- 542 (577)
T 2ymu_A 520 GQTIASASDDKTVKLWNR-NGQLL-------------------------------------------------------- 542 (577)
T ss_dssp SSCEEEEETTSEEEEECT-TSCEE--------------------------------------------------------
T ss_pred CCEEEEEECcCEEEEEeC-CCCEE--------------------------------------------------------
Confidence 999999999999999995 33322
Q ss_pred EEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEE
Q 015198 353 AQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCS 386 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~ 386 (411)
..+.-+.+.+..++|+++ ..|++++.||.|++|+
T Consensus 543 ~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 543 QTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 234444567778999998 6788899999999994
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.8e-35 Score=289.18 Aligned_cols=291 Identities=13% Similarity=0.121 Sum_probs=230.5
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....+|.+.|++++|+|+|++||+|+ |+.|+|||+.+.+......+..|...+.++.|+|++..+++++.+. ...+.
T Consensus 52 ~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~-~~~~~ 130 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR-ERFGH 130 (611)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS-SCSEE
T ss_pred CeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCC-CceeE
Confidence 345679999999999999999999999 9999999997655444444557778899999999998887766530 01247
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeE-EEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 190 (411)
|++|| .++.+..+. |...|.+++|+|++. .++ .|+.|++||..+++.+..+..|...+ .+++++|++.+|+
T Consensus 131 v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V--~~v~fspdg~~la 206 (611)
T 1nr0_A 131 VFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV--HSVRYNPDGSLFA 206 (611)
T ss_dssp EEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE--EEEEECTTSSEEE
T ss_pred EEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce--EEEEECCCCCEEE
Confidence 88887 455555666 899999999999975 344 79999999999999999998888754 4555566677777
Q ss_pred EecCCCCeEEEEEcC-CcceEEEe-------ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC-----
Q 015198 191 CPGLQRGQVRIEHFG-LNMIKLIN-------AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR----- 257 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~-~~~~~~~~-------~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~----- 257 (411)
+ |+.|+.|++|+.. ++.+..+. +|...|.+++|+|+|++|++++.|+. |++||+.+++.+.++..
T Consensus 207 s-~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~-v~lWd~~~~~~~~~~~~~~~~~ 284 (611)
T 1nr0_A 207 S-TGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT-IKIWNVATLKVEKTIPVGTRIE 284 (611)
T ss_dssp E-EETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTTEEEEEEECCSSGG
T ss_pred E-EECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCe-EEEEeCCCCceeeeecCCCCcc
Confidence 6 6689999999964 45555553 79999999999999999999999999 99999998876654431
Q ss_pred ------------------------------------CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCC
Q 015198 258 ------------------------------------GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSS 301 (411)
Q Consensus 258 ------------------------------------~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~ 301 (411)
..|...|++++|+|||++|++++.|++|++||+.+++.......
T Consensus 285 ~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~ 364 (611)
T 1nr0_A 285 DQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD 364 (611)
T ss_dssp GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSC
T ss_pred ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeeccc
Confidence 12778899999999999999999999999999998764321100
Q ss_pred CCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccCCEEEEEEeCCc
Q 015198 302 SLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTVVIVSMDGS 381 (411)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~ 381 (411)
.+...+..++|++++.+++++.|+.
T Consensus 365 -------------------------------------------------------~h~~~v~~~~~s~~~~l~s~s~d~~ 389 (611)
T 1nr0_A 365 -------------------------------------------------------VHATMITGIKTTSKGDLFTVSWDDH 389 (611)
T ss_dssp -------------------------------------------------------SCSSCEEEEEECTTSCEEEEETTTE
T ss_pred -------------------------------------------------------CCcceEEEEEECCCCcEEEEEcCCc
Confidence 0113456678888899999999999
Q ss_pred EEEEEEec
Q 015198 382 FYRCSFDP 389 (411)
Q Consensus 382 ~~~~~~~~ 389 (411)
+++|.+..
T Consensus 390 v~~w~~~~ 397 (611)
T 1nr0_A 390 LKVVPAGG 397 (611)
T ss_dssp EEEECSSS
T ss_pred eEEeecCC
Confidence 99997653
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.7e-34 Score=264.19 Aligned_cols=294 Identities=14% Similarity=0.152 Sum_probs=234.7
Q ss_pred cccCCCCCCeEEEEEcCC-CCEEEEEe-CCcEEEEecCCCcc---eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQD-YGCFAAGT-SCGFRIYNCEPFKE---TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~-g~~la~g~-dg~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
..+.+|.+.|++|+|+|+ +++|++|+ |+.|+|||+...+. .....+.+|...+.++.|++++.++++++.|
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d---- 107 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD---- 107 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT----
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc----
Confidence 457899999999999998 68999999 99999999976432 2334456788899999999999999999988
Q ss_pred CCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeE-EEeccCCCcceEEEccCCCce
Q 015198 113 PTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLH-QIETLANLRGLCCLSHHSSTS 187 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 187 (411)
+.|++|+........... +...+..+.+++++..++ .|+.+++||+....... ....+...+..+++.+++...
T Consensus 108 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 108 -GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred -ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 999999999888877776 778888999999888777 68999999987654432 335566666777888877766
Q ss_pred EEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEE
Q 015198 188 VLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYS 266 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~ 266 (411)
++++ ++.|+.|++|+... +.+..+.+|...|++++|+|++++|++++.|+. |++||+++++.+..+.. ...|..
T Consensus 187 ~~~s-~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~---~~~v~~ 261 (340)
T 4aow_A 187 IIVS-CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDG---GDIINA 261 (340)
T ss_dssp EEEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---SSCEEE
T ss_pred EEEE-EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecC---CceEEe
Confidence 6665 66899999988765 566778899999999999999999999999999 99999999999988874 458999
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCccc
Q 015198 267 IALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYF 346 (411)
Q Consensus 267 l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (411)
+.|+|++.++ +++.|+.|+|||++++........+
T Consensus 262 ~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~-------------------------------------------- 296 (340)
T 4aow_A 262 LCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQE-------------------------------------------- 296 (340)
T ss_dssp EEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC--------------------------------------------
T ss_pred eecCCCCcee-eccCCCEEEEEECCCCeEEEecccc--------------------------------------------
Confidence 9999987655 5667999999999887644321111
Q ss_pred ccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 347 SSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
............+..++|+++ +.|++++.||.|++|++..
T Consensus 297 ---~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 297 ---VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ----------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ---ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 000112223356677899998 7788888999999999985
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8e-34 Score=260.39 Aligned_cols=280 Identities=12% Similarity=0.094 Sum_probs=229.3
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcc---eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKE---TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
..+|.+.|.+++|+|++++|++++|+.|++|++.+.+. ........+...+.++.|++++..+++++.+ +.|
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i 121 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STL 121 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEE
T ss_pred eccCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcE
Confidence 34799999999999999999999999999999986432 2222223677889999999999888888887 999
Q ss_pred EEEECCCCc--EEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEE
Q 015198 117 IIWDDHQSR--CIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 117 ~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 190 (411)
++||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+ .++.+++++..|+
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGA--SCIDISNDGTKLW 199 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE--EEEEECTTSSEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCce--EEEEECCCCCEEE
Confidence 999999887 444454 788999999999988777 68999999999999999998877744 4555555667777
Q ss_pred EecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeC
Q 015198 191 CPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALS 270 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~s 270 (411)
+ ++.||.|++|+...........+...+.+++|+|++++|++++.++. |++||+.+++.. .+.. |...|.+++|+
T Consensus 200 ~-~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~~--~~~~v~~~~~~ 274 (337)
T 1gxr_A 200 T-GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLHL--HESCVLSLKFA 274 (337)
T ss_dssp E-EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EECC--CSSCEEEEEEC
T ss_pred E-EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEcC--CccceeEEEEC
Confidence 5 55899999999876555545568889999999999999999999999 999999888764 4555 78899999999
Q ss_pred CCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCccccccc
Q 015198 271 PNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEW 350 (411)
Q Consensus 271 pdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (411)
|++++|++++.||.|++||+.+++...
T Consensus 275 ~~~~~l~~~~~dg~i~~~~~~~~~~~~----------------------------------------------------- 301 (337)
T 1gxr_A 275 YCGKWFVSTGKDNLLNAWRTPYGASIF----------------------------------------------------- 301 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEE-----------------------------------------------------
T ss_pred CCCCEEEEecCCCcEEEEECCCCeEEE-----------------------------------------------------
Confidence 999999999999999999998876431
Q ss_pred ceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEe
Q 015198 351 SFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFD 388 (411)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~ 388 (411)
.. .+...+..++|+++ +.|++++.||.+++|++-
T Consensus 302 ---~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 302 ---QS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ---EE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ---Ee-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 11 12345667889998 778888899999999873
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9e-36 Score=276.71 Aligned_cols=248 Identities=14% Similarity=0.156 Sum_probs=197.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEE--eecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFR--RDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
..+|...|++++|+|++++|+++.||.|+|||+.+.+.... .....|...+.++.|+|++..+++++.| +.|+
T Consensus 90 ~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~ 164 (357)
T 4g56_B 90 GVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVK 164 (357)
T ss_dssp EEECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEE
Confidence 45789999999999999777655599999999987543322 2233677889999999999999999988 9999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCCeE-EEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
+||+.+++.+..+. |...|.+++|++++. +++ .|+.|++||+++++....+........+.++.++|++..++++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 99999999999998 899999999999864 333 6899999999998887766554444455666666654333445
Q ss_pred cCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCC-CEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeC
Q 015198 193 GLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDG-LLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALS 270 (411)
Q Consensus 193 g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g-~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~s 270 (411)
|+.|+.|++|+.. .+.+..+.+|...|++++|+|++ ++|++++.|+. |+|||+++++.+..+ + |...|++++|+
T Consensus 245 g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~-~--H~~~V~~vafs 320 (357)
T 4g56_B 245 GDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL-S--HRDFVTGVAWS 320 (357)
T ss_dssp EESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC-C--CSSCEEEEEEC
T ss_pred eecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC-C--CCCCEEEEEEe
Confidence 7789999998865 56788889999999999999987 58999999999 999999999887654 4 88899999999
Q ss_pred C-CCCEEEEEeCCCcEEEEEccccccC
Q 015198 271 P-NVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 271 p-dg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
| |+++|++++.||+|++|++.+..+.
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~~~~ 347 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSEGRT 347 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC-----
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCcc
Confidence 8 8999999999999999999876543
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-34 Score=269.99 Aligned_cols=284 Identities=14% Similarity=0.121 Sum_probs=223.3
Q ss_pred ccccCCCCCCeEEEEEcCCC-CEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCC
Q 015198 37 TAFSDVDEIELISVSWNQDY-GCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPP 113 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g-~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d 113 (411)
.....+|.+.|++++|+|++ ++|++|+ |+.|+|||+.+........+..+...+.++.|++ ++..+++++.|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d----- 140 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR----- 140 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----
Confidence 34567899999999999999 9999999 9999999999866665555456888999999999 77899998888
Q ss_pred CeEEEEECCCCcEEEEEe----ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc
Q 015198 114 TKVIIWDDHQSRCIGEFA----FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST 186 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (411)
+.|++||+.+ ..+..+. +...|.+++|+|++.+++ .|+.|++||+ +++.+..+..|...+ .++.+++++
T Consensus 141 ~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v--~~~~~~~~~ 216 (383)
T 3ei3_B 141 GATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKV--THAEFNPRC 216 (383)
T ss_dssp TEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCE--EEEEECSSC
T ss_pred CEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcE--EEEEECCCC
Confidence 9999999885 5555554 347899999999998888 6899999999 577888888887754 455555566
Q ss_pred e-EEEEecCCCCeEEEEEcCC----cceEEEeccccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC-
Q 015198 187 S-VLACPGLQRGQVRIEHFGL----NMIKLINAHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV- 259 (411)
Q Consensus 187 ~-~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~- 259 (411)
. +++ +|+.|+.|++|+... ........|...|.+++|+| ++++|++++.|+. |++||+++++.+..+..+.
T Consensus 217 ~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~ 294 (383)
T 3ei3_B 217 DWLMA-TSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPH 294 (383)
T ss_dssp TTEEE-EEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCB
T ss_pred CCEEE-EEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCccccccccccc
Confidence 6 555 467899999999875 33333347999999999999 9999999999999 9999999988776666421
Q ss_pred ----CC----------cceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCC
Q 015198 260 ----DR----------AEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISP 325 (411)
Q Consensus 260 ----~~----------~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (411)
|. ..+..++|+|++++ +++.|+.|+|||+.+++...
T Consensus 295 ~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~---------------------------- 344 (383)
T 3ei3_B 295 RQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVH---------------------------- 344 (383)
T ss_dssp CCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEE----------------------------
T ss_pred cccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceee----------------------------
Confidence 11 24455777777776 77899999999999887543
Q ss_pred CCCCCCCCcccccccccCcccccccceEEEEe--CCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 326 STGANPGSSLSFMRGVLPKYFSSEWSFAQFHI--PEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
.+.. ..+....++|++++.++++++||.|++|+++.
T Consensus 345 ----------------------------~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~~~ 382 (383)
T 3ei3_B 345 ----------------------------QLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNRED 382 (383)
T ss_dssp ----------------------------EECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEECC-
T ss_pred ----------------------------eecCCCCCceEEEEEEecCccEEEEecCCcEEEEecCC
Confidence 2221 12455667999996666666799999999864
No 27
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=6.4e-34 Score=267.62 Aligned_cols=246 Identities=12% Similarity=0.187 Sum_probs=202.7
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCc------ceEEeecCCCCEEEEEEeccCC----e---EEEE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFK------ETFRRDLKSGGFRIVEMLFRCN----I---LALV 103 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~------~~~~~~~~~~~~~~~~~~~~~~----~---~~l~ 103 (411)
..+.+|.+.|++++|+| ++|++|+ ||.|+||++++.+ .... +..|...+.++.|+++ + ..++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYS--HFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEE--EECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceE--EecCCCcEEEEEEecccccCCccccEEE
Confidence 45779999999999999 7999999 9999999998765 3333 3377788999999998 8 8888
Q ss_pred ecCCCCCCCCCeEEEEECCCCcE-----EEEEe-e-----cCceeEEEEc----CCeEE-EE---EcCeEEEEEcCC---
Q 015198 104 GAGDNSQYPPTKVIIWDDHQSRC-----IGEFA-F-----RSDVRSVKLS----RDRIV-VV---LEHKIYVYSFVD--- 161 (411)
Q Consensus 104 s~~~d~~~~d~~i~vwd~~~~~~-----~~~~~-~-----~~~i~~~~~~----~~~~~-~~---~dg~i~iwd~~~--- 161 (411)
+++.| +.|++||+.+++. +..+. | ...|.+++|+ |++.. ++ .|+.|++||+.+
T Consensus 86 s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 160 (397)
T 1sq9_A 86 TTSFS-----GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFAD 160 (397)
T ss_dssp EEETT-----SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSS
T ss_pred EEcCC-----CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccc
Confidence 88887 9999999988886 77776 6 5999999999 99887 66 689999999988
Q ss_pred ---ceeeE-----EEec-------cCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEec---c---ccce
Q 015198 162 ---LKLLH-----QIET-------LANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINA---H---DSHI 219 (411)
Q Consensus 162 ---~~~~~-----~~~~-------~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~---~---~~~i 219 (411)
++.+. .+.. +.. .+.++.+++++ ++++ |+.||.|++|+.. .+.+..+.. | ...|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~-~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 161 ESNSLTLNWSPTLELQGTVESPMTPSQ--FATSVDISERG-LIAT-GFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp HHHHTTTCCCCEEEEEEEECCSSSSCC--CCCEEEECTTS-EEEE-ECTTSEEEEEETTTTEEEEEEECCC---CCCCCE
T ss_pred ccccceeeccCcceeeeeeccccCCCC--CceEEEECCCc-eEEE-EeCCCcEEEEECCCCceeEEEeccccccccCCcc
Confidence 76666 6644 444 44555666666 5554 7789999999876 566777888 8 9999
Q ss_pred eEEEecCCCCEEEEEcCC---CeEEEEEECCCCceEEEEeCCC-----------CCcceEEEEeCCCCCEEEEEeCCCcE
Q 015198 220 ACFTLTLDGLLLATASTR---GTLIRIFNTVDGTRLQEVRRGV-----------DRAEIYSIALSPNVQWLAVASDKGTV 285 (411)
Q Consensus 220 ~~l~~sp~g~~l~s~s~d---g~~I~vwd~~~~~~~~~~~~~~-----------~~~~v~~l~~spdg~~l~s~s~dg~I 285 (411)
.+++|+|++++|++++.| +. |++||+++++.+..+.... |...|.+++|+|++++|++++.||.|
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred ceEEECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999999999 99 9999999999988887521 56789999999999999999999999
Q ss_pred EEEEccccccCC
Q 015198 286 HIFSLRVRVVGE 297 (411)
Q Consensus 286 ~vwd~~~~~~~~ 297 (411)
+|||+++++...
T Consensus 316 ~iwd~~~~~~~~ 327 (397)
T 1sq9_A 316 RFWDVKTKERIT 327 (397)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEEcCCCceeE
Confidence 999999887553
No 28
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.6e-34 Score=261.34 Aligned_cols=239 Identities=13% Similarity=0.146 Sum_probs=202.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc--eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE--TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
....|...|.+++|+|++++|++|+ |+.|++|++.+... .....+.+|...+.++.|.+++. +++++.| +.
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d-----~~ 165 (340)
T 1got_B 92 AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGD-----TT 165 (340)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETT-----SC
T ss_pred EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECC-----Cc
Confidence 3467899999999999999999999 99999999976432 23334557777888888888877 5555656 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+.. +.++|++.+|++
T Consensus 166 i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~--v~~~p~~~~l~s 243 (340)
T 1got_B 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINA--ICFFPNGNAFAT 243 (340)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEE--EEECTTSSEEEE
T ss_pred EEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEE--EEEcCCCCEEEE
Confidence 9999999999999888 899999999999998877 6999999999999999999888875554 455556677775
Q ss_pred ecCCCCeEEEEEcCCcc-eEEEe--ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 192 PGLQRGQVRIEHFGLNM-IKLIN--AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~-~~~~~--~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
|+.||.|++|+..... +..+. .+...|.+++|+|+|++|++|+.|+. |++||+.+++.+..+.+ |...|.+++
T Consensus 244 -~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~~--h~~~v~~~~ 319 (340)
T 1got_B 244 -GSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLAG--HDNRVSCLG 319 (340)
T ss_dssp -EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEE
T ss_pred -EcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEeec--CCCcEEEEE
Confidence 6689999999987543 33333 22347999999999999999999999 99999999999999988 888999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEE
Q 015198 269 LSPNVQWLAVASDKGTVHIFS 289 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd 289 (411)
|+|+|++|++|+.|+.|+|||
T Consensus 320 ~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEcCCccEEecC
Confidence 999999999999999999996
No 29
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-33 Score=253.83 Aligned_cols=280 Identities=14% Similarity=0.127 Sum_probs=231.1
Q ss_pred CccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 36 QTAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 36 ~~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
....+.+|.+.|++++| +++++|++|+ ||.|++||+.+....... ..+...+.++.|++++..+++++.| +
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-----g 81 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVV--YTGQGFLNSVCYDSEKELLLFGGKD-----T 81 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEE--EECSSCEEEEEEETTTTEEEEEETT-----S
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEe--ecCCccEEEEEECCCCCEEEEecCC-----C
Confidence 34567899999999999 9999999999 999999999875544333 3677889999999999999999888 9
Q ss_pred eEEEEECCCC---cEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEE
Q 015198 115 KVIIWDDHQS---RCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 115 ~i~vwd~~~~---~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (411)
.|++|++... +.+..+. |...|.++.|+++....+ .|+.|++|| .++.+..+..+...+..+.+.+. ++..+
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~-~~~~l 158 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSF-SENKF 158 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEET-TTTEE
T ss_pred eEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccC-CCCEE
Confidence 9999997654 5566666 899999999965543333 799999999 67888888888876666666552 33455
Q ss_pred EEecCCCCeEEEEEcCCcceEEEec-cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 190 ACPGLQRGQVRIEHFGLNMIKLINA-HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~~~~~~~~~-~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
++ ++.||.|++|+ ..+....+.. |...+.+++|+|++. |++++.|+. |++||+++++.+..+.. |...|.+++
T Consensus 159 ~~-~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~--~~~~i~~~~ 232 (313)
T 3odt_A 159 LT-ASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEG--HESFVYCIK 232 (313)
T ss_dssp EE-EETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEE
T ss_pred EE-EECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhc--CCceEEEEE
Confidence 54 56899999998 4555666666 899999999999998 899999999 99999999999999987 888999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCccccc
Q 015198 269 LSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSS 348 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (411)
|+|++ .|++++.||.|++||+++++..
T Consensus 233 ~~~~~-~l~~~~~dg~v~iwd~~~~~~~---------------------------------------------------- 259 (313)
T 3odt_A 233 LLPNG-DIVSCGEDRTVRIWSKENGSLK---------------------------------------------------- 259 (313)
T ss_dssp ECTTS-CEEEEETTSEEEEECTTTCCEE----------------------------------------------------
T ss_pred EecCC-CEEEEecCCEEEEEECCCCcee----------------------------------------------------
Confidence 99999 5889999999999999987643
Q ss_pred ccceEEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 349 EWSFAQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
..+..+...+..++|++++.+++++.||.+++|++..
T Consensus 260 ----~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 260 ----QVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp ----EEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCG
T ss_pred ----EEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCC
Confidence 2455555677788999998899999999999999886
No 30
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1e-33 Score=285.78 Aligned_cols=303 Identities=14% Similarity=0.200 Sum_probs=228.3
Q ss_pred cccCCCCCCeEEEEEcCCC-CEEEEEe-CCcEEEEecCCCcc---eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDY-GCFAAGT-SCGFRIYNCEPFKE---TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g-~~la~g~-dg~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
..+.+|.+.|++++|+|++ ++|++|+ |+.|+||++..... .....+.+|...+.++.|++++.++++++.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---- 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---- 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT----
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC----
Confidence 4577999999999999875 7899999 99999999975432 2233455788889999999999999999988
Q ss_pred CCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEE---eccCCCcceEEEccCCC
Q 015198 113 PTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQI---ETLANLRGLCCLSHHSS 185 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 185 (411)
+.|++||+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+......... ..|...+..++++++..
T Consensus 452 -g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 530 (694)
T 3dm0_A 452 -GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTL 530 (694)
T ss_dssp -SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSS
T ss_pred -CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCC
Confidence 999999999999998887 999999999999998777 6999999998654333222 23444445555555543
Q ss_pred ceEEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcce
Q 015198 186 TSVLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEI 264 (411)
Q Consensus 186 ~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v 264 (411)
...+++ |+.|+.|++|+... +....+.+|...|++++|+|+|++|++++.|+. |++||+.+++.+..+. +...|
T Consensus 531 ~~~l~s-~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~---~~~~v 605 (694)
T 3dm0_A 531 QPTIVS-ASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLE---ANSVI 605 (694)
T ss_dssp SCEEEE-EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCB---CSSCE
T ss_pred cceEEE-EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEec---CCCcE
Confidence 345654 67899999999765 556778899999999999999999999999999 9999999999887765 44579
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCc
Q 015198 265 YSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPK 344 (411)
Q Consensus 265 ~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (411)
.+++|+|++.+|++++. +.|+|||+++++.......+.. .. .......+ +
T Consensus 606 ~~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~------------------------~~-~~~~~~~~---~- 655 (694)
T 3dm0_A 606 HALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLK------------------------AE-AEKADNSG---P- 655 (694)
T ss_dssp EEEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------------------------------
T ss_pred EEEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccc------------------------cc-cccccccc---c-
Confidence 99999999998887765 5599999999876543222200 00 00000000 0
Q ss_pred ccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEe
Q 015198 345 YFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFD 388 (411)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~ 388 (411)
...+........++|+++ ..|++++.||.|++|.+.
T Consensus 656 --------~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 656 --------AATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred --------ccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 000000112456789998 788888899999999875
No 31
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=262.89 Aligned_cols=304 Identities=10% Similarity=0.128 Sum_probs=232.5
Q ss_pred ccCCCCCCeEEEEEcCCCCEEE-EEe----CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCC---eEEEEecCCCCC
Q 015198 39 FSDVDEIELISVSWNQDYGCFA-AGT----SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCN---ILALVGAGDNSQ 110 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la-~g~----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~s~~~d~~ 110 (411)
...+|.+.|.+++|+|++..++ +|+ |+.|+||++.+.+......+ .+...+.++.|+++ +..+++++.|
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~d-- 89 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-EKAKPIKCGTFGATSLQQRYLATGDFG-- 89 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-EESSCEEEEECTTCCTTTCCEEEEETT--
T ss_pred hccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-cccCcEEEEEEcCCCCCCceEEEecCC--
Confidence 3467999999999999997665 443 79999999998665444333 56778899999998 5888888887
Q ss_pred CCCCeEEEEECCCCc-EEEEEe-ecCceeEEEE------cCCeEEEE---EcCeEEEEEcCCce-eeEEEeccCC--Ccc
Q 015198 111 YPPTKVIIWDDHQSR-CIGEFA-FRSDVRSVKL------SRDRIVVV---LEHKIYVYSFVDLK-LLHQIETLAN--LRG 176 (411)
Q Consensus 111 ~~d~~i~vwd~~~~~-~~~~~~-~~~~i~~~~~------~~~~~~~~---~dg~i~iwd~~~~~-~~~~~~~~~~--~~~ 176 (411)
+.|++||+.+++ .+..+. |...|.++.| +|++..++ .|+.|++||+++++ .+..+..+.. ...
T Consensus 90 ---g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 90 ---GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ---SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred ---CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999987 777777 8999999955 67887777 68999999999886 6777765443 123
Q ss_pred eEEEc----cCCCceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecC---CCCEEEEEcCCCeEEEEEECCCC
Q 015198 177 LCCLS----HHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTL---DGLLLATASTRGTLIRIFNTVDG 249 (411)
Q Consensus 177 ~~~~~----~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp---~g~~l~s~s~dg~~I~vwd~~~~ 249 (411)
+.++. +++++.++++ ++.||.|++|+...........|...|.+++|+| ++.+|++++.|+. |++||++++
T Consensus 167 v~~~~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~ 244 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCA-GYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQ 244 (357)
T ss_dssp EEEEEEECCCC-CCCEEEE-EETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEE-EccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCC
Confidence 33443 5677778776 5689999999998877777788999999999999 9999999999999 999999877
Q ss_pred ceEEEEe-----CCCCCcceEEEEeCCCCC-EEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCcccc
Q 015198 250 TRLQEVR-----RGVDRAEIYSIALSPNVQ-WLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLI 323 (411)
Q Consensus 250 ~~~~~~~-----~~~~~~~v~~l~~spdg~-~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (411)
+.+..+. . |...|.+++|+|+++ +|++++.||.|++||++++.........
T Consensus 245 ~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------- 301 (357)
T 3i2n_A 245 HPTKGFASVSEKA--HKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSE--------------------- 301 (357)
T ss_dssp ETTTEEEEEEEEC--CSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTT---------------------
T ss_pred CcccceeeeccCC--CcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCC---------------------
Confidence 6544443 5 788999999999998 8999999999999999987654211111
Q ss_pred CCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEE-EEEeCCcEEEEEEec
Q 015198 324 SPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVV-IVSMDGSFYRCSFDP 389 (411)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~dg~~~~~~~~~ 389 (411)
+... ...........+..+...+..++|+++ ..|+ +++.||.+++|++..
T Consensus 302 -----g~~~-----------~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 302 -----GIEM-----------GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp -----SCCC-----------CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred -----CCcc-----------ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 0000 000011223455556677888999998 5566 578899999999875
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=266.87 Aligned_cols=296 Identities=16% Similarity=0.171 Sum_probs=232.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
+|.+.|++++|+|++++|++|+ |+.|++|+.. ..... .+..+...+.++.|++++..+++++.| +.|++||
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd 177 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GALLN--VLNFHRAPIVSVKWNKDGTHIISMDVE-----NVTILWN 177 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEE--EECCCCSCEEEEEECTTSSEEEEEETT-----CCEEEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCeee--eccCCCccEEEEEECCCCCEEEEEecC-----CeEEEEE
Confidence 4788999999999999999999 9999999943 23332 344788889999999999888888887 9999999
Q ss_pred CCCCcEEEEEe-ecCc---------------eeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEcc
Q 015198 121 DHQSRCIGEFA-FRSD---------------VRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSH 182 (411)
Q Consensus 121 ~~~~~~~~~~~-~~~~---------------i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 182 (411)
+.+++.+..+. +... +.++.|++++.+++ .++.|++||+.+++.+..+..|...+..++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~- 256 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN- 256 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE-
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC-
Confidence 99999988887 4444 99999999988777 79999999999999988888887755555554
Q ss_pred CCCceEEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCC
Q 015198 183 HSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDR 261 (411)
Q Consensus 183 ~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~ 261 (411)
+++.+|++ ++.|+.|++|+... +.+..+..|...|.+++|+|++ +|++++.|+. |++||+++++.+..+.. |.
T Consensus 257 -~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~ 330 (425)
T 1r5m_A 257 -DTNKLLLS-ASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIV--DG 330 (425)
T ss_dssp -TTTTEEEE-EETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEEC--TT
T ss_pred -CCCCEEEE-EcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEeccc--CC
Confidence 45567765 56899999998654 5677788899999999999999 9999999999 99999999999988887 77
Q ss_pred cceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccc
Q 015198 262 AEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGV 341 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (411)
..|.+++|+|++++|++++.||.|++||+++++........ .....+..
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~---------------------------~~~~~~~~---- 379 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYG---------------------------NRDGILNP---- 379 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC-----------------------------------------C----
T ss_pred ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeec---------------------------ccccccCc----
Confidence 89999999999999999999999999999988732100000 00000000
Q ss_pred cCcccccccceEEEEeCCC--ceEEEEEccC-CEEEEEEeCCcEEEEEEe
Q 015198 342 LPKYFSSEWSFAQFHIPEV--THFIAAFGSQ-NTVVIVSMDGSFYRCSFD 388 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~dg~~~~~~~~ 388 (411)
........+..+.. .+..++|+++ ..|++++.||.|++|.++
T Consensus 380 -----~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 380 -----LPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -----EECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred -----ccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 00112344555544 7888999998 678889999999999875
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1e-33 Score=263.54 Aligned_cols=241 Identities=12% Similarity=0.129 Sum_probs=202.9
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
...|.++|++++|+|++++|++|+ |+.|++|++++.+......+..|...+.++.|++++..+++++.| +.|++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~v 78 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYV 78 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEE
Confidence 345899999999999999999998 999999999876522333455788889999999999889998887 99999
Q ss_pred EECCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCcee---eEEE-eccCCCcceEEEccCCCceE
Q 015198 119 WDDHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKL---LHQI-ETLANLRGLCCLSHHSSTSV 188 (411)
Q Consensus 119 wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~ 188 (411)
||+.+++....+. |...|.+++|+|++.+++ .|+.|++||++.++. ...+ ..|.. .+.++.+++++.+
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~ 156 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS--TVLSLDWHPNSVL 156 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS--CEEEEEECTTSSE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC--CeeEEEEcCCCCE
Confidence 9998887665543 788999999999998877 689999999987653 3333 33444 4566666667777
Q ss_pred EEEecCCCCeEEEEEcC-------------------CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC
Q 015198 189 LACPGLQRGQVRIEHFG-------------------LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG 249 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~-------------------~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~ 249 (411)
|++ |+.||.|++|+.. ++.+..+..|...|.+++|+|++++|++++.|+. |++||++++
T Consensus 157 l~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~ 234 (372)
T 1k8k_C 157 LAA-GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADKK 234 (372)
T ss_dssp EEE-EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGGT
T ss_pred EEE-EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 776 5689999999853 4667777899999999999999999999999999 999999999
Q ss_pred ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 250 TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 250 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
+.+..+.. |...|.+++|+|++++|+++ .|+.|++|++++
T Consensus 235 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVATLAS--ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TEEEEEEC--SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred ceeEEEcc--CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999987 77899999999999988877 899999999998
No 34
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1e-33 Score=256.07 Aligned_cols=247 Identities=13% Similarity=0.118 Sum_probs=196.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC--CeEEEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC--NILALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~~~d~~ 115 (411)
...+|.+.|++++|+|+|++||+|+ |+.|+||+++.........+.+|...+.++.|++ ++..+++++.| ++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~ 78 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GK 78 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CE
Confidence 3678999999999999999999999 9999999997533223334558888899999975 37789999988 99
Q ss_pred EEEEECCCCc--EEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCcee--eEEEeccCCCcceEEEccCC-
Q 015198 116 VIIWDDHQSR--CIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLKL--LHQIETLANLRGLCCLSHHS- 184 (411)
Q Consensus 116 i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~- 184 (411)
|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++++.. ...+..|...+..++++++.
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 9999998874 455555 8899999999997 65555 799999999987532 35567777755555665542
Q ss_pred ----------CceEEEEecCCCCeEEEEEcCCc-----ceEEEeccccceeEEEecCCC---CEEEEEcCCCeEEEEEEC
Q 015198 185 ----------STSVLACPGLQRGQVRIEHFGLN-----MIKLINAHDSHIACFTLTLDG---LLLATASTRGTLIRIFNT 246 (411)
Q Consensus 185 ----------~~~~l~~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~i~~l~~sp~g---~~l~s~s~dg~~I~vwd~ 246 (411)
++.+|++ |+.|+.|++|+.... ....+.+|...|.+++|+|++ .+|++++.|+. |+|||+
T Consensus 159 ~~~~~~~~~~~~~~l~s-gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~iWd~ 236 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CIIWTQ 236 (297)
T ss_dssp -----------CCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEEE
T ss_pred cccccCCCCCCcceEEE-EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EEEEEe
Confidence 2346665 678999999987642 456778999999999999985 89999999999 999999
Q ss_pred CCCc--e-EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 247 VDGT--R-LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 247 ~~~~--~-~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
+++. . ...+....|...|.+++|+|+|++|++++.|+.|+||+...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 7753 1 22332233678999999999999999999999999999874
No 35
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5e-33 Score=261.70 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=204.4
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 44 EIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
...|.+++|+|+|++|++|+ |+.|+|||+++.+.... +.+|...+.++.|++++..+++++.| +.|++||+.
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~ 195 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLR 195 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETT
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECC
Confidence 34599999999999999999 99999999987554333 45788889999999999999999988 999999999
Q ss_pred CCcEEEEEeecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEE-------eccCCCcceEEEccCCCceEEEE
Q 015198 123 QSRCIGEFAFRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQI-------ETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 123 ~~~~~~~~~~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
++++...+.+...+.+++|+| ++.+++ .|+.|++||+++++.+..+ ..|.. .+.++.+++++.+|++
T Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 196 TGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD--SVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSS--CEEEEEECTTSSEEEE
T ss_pred CCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCC--CEEEEEECCCCCEEEE
Confidence 999999898889999999999 787777 6999999999998887776 23444 4556666777778875
Q ss_pred ecCCCCeEEEEEcCC-------------cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCC
Q 015198 192 PGLQRGQVRIEHFGL-------------NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRG 258 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~-------------~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~ 258 (411)
|+.|+.|++|+... .+...+.+|...|.+++|+|++++|++|+.|+. |++||+.+++.+..+.+
T Consensus 274 -~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~~- 350 (393)
T 1erj_A 274 -GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQG- 350 (393)
T ss_dssp -EETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEEC-
T ss_pred -EeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEECC-
Confidence 66899999998753 234567889999999999999999999999999 99999999999999988
Q ss_pred CCCcceEEEEeCC------CCCEEEEEeCCCcEEEEEccccc
Q 015198 259 VDRAEIYSIALSP------NVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 259 ~~~~~v~~l~~sp------dg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
|...|.+++|++ ++++|++|+.||+|+||+++..+
T Consensus 351 -h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 351 -HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp -CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred -CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 888999999886 68899999999999999997653
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.6e-32 Score=270.96 Aligned_cols=276 Identities=16% Similarity=0.218 Sum_probs=231.9
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++++ |+.|++|+.+. +. . ..+..|...+.++.|+|++..+++++.| +.|
T Consensus 256 ~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~-~-~~~~~h~~~v~~~~~~~~~~~l~t~~~d-----~~i 327 (577)
T 2ymu_A 256 QTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QL-L-QTLTGHSSSVWGVAFSPDGQTIASASDD-----KTV 327 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CE-E-EEECCCSSCEEEEEECTTSSEEEEEETT-----SCE
T ss_pred EEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cE-E-EEEecCCCCeEEEEECCCCCEEEEEeCC-----CeE
Confidence 45678999999999999999999999 99999999764 22 2 2345788889999999999999999888 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
++||... +.+..+. |...+.+++|+|++..++ .|+.|++||. +++.+..+..|...+ .++.+++++.+|++
T Consensus 328 ~~w~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v--~~~~~s~dg~~l~~- 402 (577)
T 2ymu_A 328 KLWNRNG-QHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV--RGVAFSPDGQTIAS- 402 (577)
T ss_dssp EEEETTS-CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCE--EEEEECTTSSCEEE-
T ss_pred EEEeCCC-CeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCe--EEEEECCCCCEEEE-
Confidence 9999654 4455555 889999999999998887 6899999995 678888888887754 45555666777776
Q ss_pred cCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 193 GLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 193 g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
++.|+.|++|+.+++.+..+.+|...|.+++|+|++++|++++.|+. |++||. +++.+..+.. |...|.+++|+||
T Consensus 403 ~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~~--~~~~v~~~~~spd 478 (577)
T 2ymu_A 403 ASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPD 478 (577)
T ss_dssp EETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTT
T ss_pred EeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEcC--CCCCEEEEEEcCC
Confidence 56899999999999999999999999999999999999999999999 999996 6788888888 8889999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
+++|++++.|+.|++||.. ++..
T Consensus 479 ~~~las~~~d~~i~iw~~~-~~~~-------------------------------------------------------- 501 (577)
T 2ymu_A 479 GQTIASASDDKTVKLWNRN-GQLL-------------------------------------------------------- 501 (577)
T ss_dssp SCEEEEEETTSEEEEEETT-SCEE--------------------------------------------------------
T ss_pred CCEEEEEeCCCEEEEEcCC-CCEE--------------------------------------------------------
Confidence 9999999999999999953 3322
Q ss_pred EEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEE
Q 015198 353 AQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSF 387 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~ 387 (411)
..+.-+...+..++|+++ ..|++++.||.|++|+.
T Consensus 502 ~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 502 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 233444456778899998 67888888999999974
No 37
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.3e-33 Score=258.55 Aligned_cols=285 Identities=13% Similarity=0.170 Sum_probs=223.9
Q ss_pred ccCCCCCCeEEEEEcCC----CCEEE-EEeCCcEEEEecCCCcceEEeec---CCCCEEEEEEeccCC----eEEEEecC
Q 015198 39 FSDVDEIELISVSWNQD----YGCFA-AGTSCGFRIYNCEPFKETFRRDL---KSGGFRIVEMLFRCN----ILALVGAG 106 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~----g~~la-~g~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~l~s~~ 106 (411)
...+|.++|++++|+|+ ...++ ++.++.|+||++.+.+....... ..+...+.++.|+++ +.++++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 35689999999999984 33444 44488999999987554333221 125567888889887 77888888
Q ss_pred CCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEE---eccCCCcceE
Q 015198 107 DNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQI---ETLANLRGLC 178 (411)
Q Consensus 107 ~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~ 178 (411)
.| +.|++||+.+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++.+..+ ..|.. .+.
T Consensus 93 ~d-----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~v~ 165 (366)
T 3k26_A 93 SR-----GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD--EVL 165 (366)
T ss_dssp TT-----CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS--CEE
T ss_pred CC-----CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC--cee
Confidence 87 999999999999999998 999999999999 777776 6899999999999998888 45655 455
Q ss_pred EEccCCCceEEEEecCCCCeEEEEEcCCcc-e----------------------------EEEeccccceeEEEecCCCC
Q 015198 179 CLSHHSSTSVLACPGLQRGQVRIEHFGLNM-I----------------------------KLINAHDSHIACFTLTLDGL 229 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~-~----------------------------~~~~~~~~~i~~l~~sp~g~ 229 (411)
++.+++++.+|++ ++.||.|++|+..... . .....|...|.+++|+ ++
T Consensus 166 ~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~ 242 (366)
T 3k26_A 166 SADYDLLGEKIMS-CGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD 242 (366)
T ss_dssp EEEECTTSSEEEE-EETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT
T ss_pred EEEECCCCCEEEE-ecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC
Confidence 5666667777776 5589999999877521 1 1223399999999998 77
Q ss_pred EEEEEcCCCeEEEEEECCCCce--------------EEEEeCCCCCcceEEEEeCCC--CCEEEEEeCCCcEEEEEcccc
Q 015198 230 LLATASTRGTLIRIFNTVDGTR--------------LQEVRRGVDRAEIYSIALSPN--VQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 230 ~l~s~s~dg~~I~vwd~~~~~~--------------~~~~~~~~~~~~v~~l~~spd--g~~l~s~s~dg~I~vwd~~~~ 293 (411)
+|++++.|+. |++||+.+++. +..+.. |...|++++|+|+ +++|++++.||.|++||++++
T Consensus 243 ~l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 243 LILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EEEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred EEEEEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 9999999999 99999987754 667776 7788999999999 999999999999999999987
Q ss_pred ccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeC--CCceEEEEEccC-
Q 015198 294 VVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIP--EVTHFIAAFGSQ- 370 (411)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 370 (411)
+.... ....+..+ ...+..++|+++
T Consensus 320 ~~~~~----------------------------------------------------~~~~~~~~~~~~~v~~~~~s~~~ 347 (366)
T 3k26_A 320 DPHKA----------------------------------------------------KCTTLTHHKCGAAIRQTSFSRDS 347 (366)
T ss_dssp SGGGC----------------------------------------------------EEEEECCTTCCSCEEEEEECTTS
T ss_pred CCccc----------------------------------------------------cceEEcccccCCceEEEEeCCCC
Confidence 64320 01122222 356778899998
Q ss_pred CEEEEEEeCCcEEEEEEe
Q 015198 371 NTVVIVSMDGSFYRCSFD 388 (411)
Q Consensus 371 ~~~~~~~~dg~~~~~~~~ 388 (411)
+.|++++.||.|++|++.
T Consensus 348 ~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 348 SILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SEEEEEETTSEEEEEEC-
T ss_pred CeEEEEeCCCEEEEEEec
Confidence 778888899999999864
No 38
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=256.94 Aligned_cols=249 Identities=16% Similarity=0.180 Sum_probs=197.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
..+|...|.+++|+|++++|++|+ |+.|+||++..........+.+|...+.++.|+|++..+++++.| +.|++
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~i 131 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWV 131 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEE
Confidence 468999999999999999999999 999999999875544445566888899999999999999999988 99999
Q ss_pred EECCCCc---EEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCce--eeEEEeccCCCcceEEEccCCCceEE
Q 015198 119 WDDHQSR---CIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLK--LLHQIETLANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 119 wd~~~~~---~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (411)
||+.++. ++..+. |...|.+++|+|++.+++ .|+.|++||+++++ +...+..|.. .+.++++++++.+|
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~--~v~~l~~sp~g~~l 209 (345)
T 3fm0_A 132 WEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHES--TVWSLAFDPSGQRL 209 (345)
T ss_dssp EEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECTTSSEE
T ss_pred EECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCC--ceEEEEECCCCCEE
Confidence 9988764 344454 889999999999998887 69999999998775 3456777776 45556666677788
Q ss_pred EEecCCCCeEEEEEcCC----------------cceEEEec-cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc--
Q 015198 190 ACPGLQRGQVRIEHFGL----------------NMIKLINA-HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT-- 250 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~----------------~~~~~~~~-~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~-- 250 (411)
++ |+.|+.|++|+... .++..+.+ |...|.+++|+|++..|++++.|+. |++|+...+.
T Consensus 210 ~s-~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~~~ 287 (345)
T 3fm0_A 210 AS-CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNSDP 287 (345)
T ss_dssp EE-EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTSCT
T ss_pred EE-EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCCCc
Confidence 76 66899999997521 12333444 8889999999999999999999999 9999987542
Q ss_pred --eEEEE---eCCCCCcceEEEEeCCCC-CEEEEEeCCCcEEEEEccccccCC
Q 015198 251 --RLQEV---RRGVDRAEIYSIALSPNV-QWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 251 --~~~~~---~~~~~~~~v~~l~~spdg-~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
....+ ....|...|++++|+|++ .+|++++.||+|++|++.++++..
T Consensus 288 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 288 QQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp TSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred ceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 11111 112278899999999998 499999999999999999988653
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-34 Score=269.92 Aligned_cols=241 Identities=11% Similarity=0.078 Sum_probs=189.5
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
...+.++|++++|+|++++|++|+ |+.|+||++.+........+..|...+.++.|++++.++++++.| +.|++
T Consensus 7 ~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~v 81 (377)
T 3dwl_C 7 LHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYV 81 (377)
T ss_dssp EEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEE
T ss_pred EecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEE
Confidence 344678999999999999999998 999999999875323444466788899999999999999999988 99999
Q ss_pred EECCCCc---EEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCce---eeEEEec-cCCCcceEEEccCCCce
Q 015198 119 WDDHQSR---CIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLK---LLHQIET-LANLRGLCCLSHHSSTS 187 (411)
Q Consensus 119 wd~~~~~---~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (411)
||+.+++ ....+. |...|.+++|+|++.+++ .|+.|++||+++++ ....+.. |.. .+.++.+++++.
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~ 159 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS--TILSLDWHPNNV 159 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS--CEEEEEECTTSS
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC--CeEEEEEcCCCC
Confidence 9998877 444444 899999999999988777 68999999998876 4667766 665 455556666777
Q ss_pred EEEEecCCCCeEEEEEcC-------------------CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCC
Q 015198 188 VLACPGLQRGQVRIEHFG-------------------LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVD 248 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~-------------------~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~ 248 (411)
+|++ |+.|+.|++|+.. ++.+..+ .|...|.+++|+|++++|++++.|+. |++||+.+
T Consensus 160 ~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~~ 236 (377)
T 3dwl_C 160 LLAA-GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPSA 236 (377)
T ss_dssp EEEE-EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTE-EC-CEECS
T ss_pred EEEE-EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCc-EEEEECCC
Confidence 7776 6689999999974 3445555 89999999999999999999999999 99999999
Q ss_pred Cce----EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 249 GTR----LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 249 ~~~----~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
++. +..+.. |...|.+++|+|++++|++++.++ +.+|+...+
T Consensus 237 ~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~-~~~~~~~~~ 282 (377)
T 3dwl_C 237 PEQPPRALITVKL--SQLPLRSLLWANESAIVAAGYNYS-PILLQGNES 282 (377)
T ss_dssp TTSCEEECCCEEC--SSSCEEEEEEEETTEEEEEESSSS-EEEECCCC-
T ss_pred CCCcceeeEeecC--CCCceEEEEEcCCCCEEEEEcCCc-EEEEEeCCC
Confidence 987 677777 788999999999999999987666 557777643
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=259.96 Aligned_cols=279 Identities=15% Similarity=0.182 Sum_probs=226.7
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEe-CCcEEEEec----CCCcc------eEEee--cCC------CCEEEEEEeccCCeE
Q 015198 41 DVDEIELISVSWNQDYG-CFAAGT-SCGFRIYNC----EPFKE------TFRRD--LKS------GGFRIVEMLFRCNIL 100 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~-~la~g~-dg~i~iw~~----~~~~~------~~~~~--~~~------~~~~~~~~~~~~~~~ 100 (411)
..|.+.|++++|+|+++ +|++|+ |+.|++|++ .+.+. ..... +.. +...+.++.|++++.
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 34668999999999999 999999 999999999 76552 22211 111 456899999999999
Q ss_pred EEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCC--
Q 015198 101 ALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANL-- 174 (411)
Q Consensus 101 ~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~-- 174 (411)
++++++.| +.|++|| .+++.+..+. |...|.+++|+|++.+++ .|+.|++||+.+++.+..+..+...
T Consensus 122 ~l~~~~~d-----g~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 122 SIVTGVEN-----GELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp EEEEEETT-----SCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EEEEEeCC-----CeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 99998887 9999999 7788888887 899999999999998777 6899999999999999888776654
Q ss_pred -------------cceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeE
Q 015198 175 -------------RGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTL 240 (411)
Q Consensus 175 -------------~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~ 240 (411)
+..+.+.+ ++. ++ +++.+|.|++|+... +.+..+..|...|.+++|+|++++|++++.|+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~-~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~- 270 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVD--DDK-FV-IPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT- 270 (425)
T ss_dssp ----------CCCBSCCEEEE--TTE-EE-EECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC-
T ss_pred ceeeccccCCcceeeEEEEcC--CCE-EE-EEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE-
Confidence 44445544 444 44 356899999988765 566778899999999999999999999999999
Q ss_pred EEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCc
Q 015198 241 IRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFD 320 (411)
Q Consensus 241 I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
|++||+++++.+..+.. |...|.+++|+|++ +|++++.|+.|++||+++++...
T Consensus 271 i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~----------------------- 324 (425)
T 1r5m_A 271 LRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLA----------------------- 324 (425)
T ss_dssp EEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEE-----------------------
T ss_pred EEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeE-----------------------
Confidence 99999999998888877 78899999999999 99999999999999998876432
Q ss_pred cccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 321 TLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+...+..++|+++ +.|++++.||.|++|++..
T Consensus 325 ---------------------------------~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~ 361 (425)
T 1r5m_A 325 ---------------------------------LSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKK 361 (425)
T ss_dssp ---------------------------------EEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHH
T ss_pred ---------------------------------ecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCC
Confidence 33444456778899998 7788888899999999885
No 41
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-32 Score=250.38 Aligned_cols=244 Identities=14% Similarity=0.166 Sum_probs=205.7
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
.....|..+|.+++|+|++++|++|+ |+.|++||+.+.+.... +..|...+.++.|+|++.++++++.| ++|
T Consensus 49 ~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sgs~D-----~~v 121 (304)
T 2ynn_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDD-----LTV 121 (304)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCE
T ss_pred EEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE--EeCCCCcEEEEEEcCCCCEEEEECCC-----CeE
Confidence 34567999999999999999999999 99999999998665544 34788889999999999999999988 999
Q ss_pred EEEECCCCcE-EEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEec-cCCCcceEEEccCCCceEE
Q 015198 117 IIWDDHQSRC-IGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIET-LANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 117 ~vwd~~~~~~-~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 189 (411)
++||++++.. ...+. |...|.+++|+| ++..++ .|+.|++||+++++....+.. +...+..+.+.+.+++.+|
T Consensus 122 ~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (304)
T 2ynn_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (304)
T ss_dssp EEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEE
T ss_pred EEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEE
Confidence 9999988744 45555 899999999999 455555 699999999988776666643 4455667778887787788
Q ss_pred EEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 190 ACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
++ |+.|+.|++|+... +++..+.+|...|.+++|+|++.+|++|+.||. |++||+.+++.+..+.. +...+++++
T Consensus 202 ~s-~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~-i~iWd~~~~~~~~~~~~--~~~~~~~~~ 277 (304)
T 2ynn_A 202 IT-ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSWCIA 277 (304)
T ss_dssp EE-EETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCCEEEEECC--SSSSEEEEE
T ss_pred EE-EcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCe-EEEEECCCCceeeeccC--CCccEEEEE
Confidence 76 66899999998764 667889999999999999999999999999999 99999999999999987 777999999
Q ss_pred eCCCCC--EEEEEeCCCcEEEEEcccc
Q 015198 269 LSPNVQ--WLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 269 ~spdg~--~l~s~s~dg~I~vwd~~~~ 293 (411)
|+|++. +|++|+.|| +.+|++.+.
T Consensus 278 ~~~~~~~~~~asg~~~g-~~~~~~~~~ 303 (304)
T 2ynn_A 278 THPTGRKNYIASGFDNG-FTVLSLGND 303 (304)
T ss_dssp ECTTCGGGCEEEEETTE-EEEEECC--
T ss_pred ECCCCCceEEEEecCCc-eEEEEeccC
Confidence 999875 577777666 888888753
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.7e-34 Score=272.40 Aligned_cols=288 Identities=12% Similarity=0.052 Sum_probs=216.3
Q ss_pred ccCCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~ 115 (411)
...+|...|+||+|+| ++++||+|+ ||.|+|||+++........+.+|...|.++.|+| ++..|++++.| ++
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~ 188 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GT 188 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SC
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CE
Confidence 3457889999999999 467999999 9999999998766655555667888999999997 67788999988 99
Q ss_pred EEEEECCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEE
Q 015198 116 VIIWDDHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (411)
|++||++++....... +...+.+++|+|++.+++ .||.|++||++. +.+..+..|...+..+++ ++++..+
T Consensus 189 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~--~p~~~~~ 265 (435)
T 4e54_B 189 TRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVAL--NPCCDWF 265 (435)
T ss_dssp EEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEE--CTTCSSE
T ss_pred EEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeee--cCCCceE
Confidence 9999987765443333 345678999999998887 689999999864 566677778775555544 4444444
Q ss_pred EEecCCCCeEEEEEcCCc----ceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCC----
Q 015198 190 ACPGLQRGQVRIEHFGLN----MIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDR---- 261 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~~----~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~---- 261 (411)
+++|+.|+.|++|+.... ......+|...|++++|+|+|++|++++.|+. |+|||+.+++....+..+.+.
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQH 344 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCSS
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEeccccccccc
Confidence 445778999999987642 23334679999999999999999999999999 999999999888777653221
Q ss_pred cceEEEEeCCCCCEEEEEe------------CCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCC
Q 015198 262 AEIYSIALSPNVQWLAVAS------------DKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGA 329 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (411)
..+....|+|++.+++++. .++.|++||+.+++....+..+
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~--------------------------- 397 (435)
T 4e54_B 345 LTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP--------------------------- 397 (435)
T ss_dssp SCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS---------------------------
T ss_pred ceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC---------------------------
Confidence 1234456777777776664 2357999999888754211100
Q ss_pred CCCCcccccccccCcccccccceEEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 330 NPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
-......+++|+|++.+++++.||.|++|++.+
T Consensus 398 ---------------------------~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~ 430 (435)
T 4e54_B 398 ---------------------------ESSGISSLNEFNPMGDTLASAMGYHILIWSQQE 430 (435)
T ss_dssp ---------------------------SCCCCCCEEEECTTSSCEEEECSSEEEECCCC-
T ss_pred ---------------------------CCCcEEEEEEECCCCCEEEEEcCCcEEEEECCc
Confidence 001233456899998888888899999998876
No 43
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-32 Score=250.27 Aligned_cols=241 Identities=9% Similarity=0.162 Sum_probs=199.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|...|.+++|+|++++|++|+ |+.|+|||+.+.+.... +.+|...+.++.|++++..+++++.| +.|+
T Consensus 60 ~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~ 132 (319)
T 3frx_A 60 SFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQR--FVGHKSDVMSVDIDKKASMIISGSRD-----KTIK 132 (319)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSCEEEEEETT-----SCEE
T ss_pred EEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEE--EccCCCcEEEEEEcCCCCEEEEEeCC-----CeEE
Confidence 4678999999999999999999999 99999999998654433 44788889999999999999999988 9999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCCeE------EEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCce
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRDRI------VVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTS 187 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~------~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (411)
+||++ ++++..+. |...|.++.+.|... .++ .|+.|++||+++++....+..|...+ .++.++|++.
T Consensus 133 vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v--~~~~~sp~g~ 209 (319)
T 3frx_A 133 VWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNI--NTLTASPDGT 209 (319)
T ss_dssp EEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCE--EEEEECTTSS
T ss_pred EEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcE--EEEEEcCCCC
Confidence 99986 45666665 899999999998643 444 79999999999999988888888754 4555566777
Q ss_pred EEEEecCCCCeEEEEEcCCcc-eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC------C
Q 015198 188 VLACPGLQRGQVRIEHFGLNM-IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV------D 260 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~~~-~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~------~ 260 (411)
+|++ |+.||.|++|+..... +..+. +...|.+++|+|++.+|++++. +. +++|++..+..+..+.... +
T Consensus 210 ~l~s-~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~la~~~~-~~-i~v~~~~~~~~~~~~~~~~~~~~~~~ 285 (319)
T 3frx_A 210 LIAS-AGKDGEIMLWNLAAKKAMYTLS-AQDEVFSLAFSPNRYWLAAATA-TG-IKVFSLDPQYLVDDLRPEFAGYSKAA 285 (319)
T ss_dssp EEEE-EETTCEEEEEETTTTEEEEEEE-CCSCEEEEEECSSSSEEEEEET-TE-EEEEEETTEEEEEEECCCCTTCCGGG
T ss_pred EEEE-EeCCCeEEEEECCCCcEEEEec-CCCcEEEEEEcCCCCEEEEEcC-CC-cEEEEeCcCeeeeccCccccccccCc
Confidence 8876 6689999999987654 44444 5578999999999999998875 45 9999998887777765421 3
Q ss_pred CcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 261 RAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 261 ~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
...+.+++|+|||++|++|+.||.|+|||+.++
T Consensus 286 ~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 286 EPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred CcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 457899999999999999999999999999875
No 44
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-33 Score=258.38 Aligned_cols=245 Identities=14% Similarity=0.116 Sum_probs=191.3
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC--CeEEEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC--NILALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~~~d~~ 115 (411)
...+|.+.|++++|+|+|++||+|+ |+.|+|||+.+........+.+|...+.++.|++ ++..|++++.| ++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~ 82 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RK 82 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CE
Confidence 3568999999999999999999999 9999999998755444445668888899999975 47788898888 99
Q ss_pred EEEEECCCCc--EEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCcee---eEEEeccCCCcceEEEccCC
Q 015198 116 VIIWDDHQSR--CIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLKL---LHQIETLANLRGLCCLSHHS 184 (411)
Q Consensus 116 i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~ 184 (411)
|++||+++++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||++.+.. ...+..|...+..+.++++.
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 9999998874 555565 8899999999997 66666 799999999987532 23344565555555565542
Q ss_pred ---------------CceEEEEecCCCCeEEEEEcCC----cceEEEeccccceeEEEecCCC----CEEEEEcCCCeEE
Q 015198 185 ---------------STSVLACPGLQRGQVRIEHFGL----NMIKLINAHDSHIACFTLTLDG----LLLATASTRGTLI 241 (411)
Q Consensus 185 ---------------~~~~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~~i~~l~~sp~g----~~l~s~s~dg~~I 241 (411)
.+.+|+ +|+.|+.|++|+... ..+..+.+|...|.+++|+|++ ++|++++.|+. |
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~-v 240 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFA-SGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGR-V 240 (316)
T ss_dssp CC------CCSCCCCCCCBEE-CCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCE-E
T ss_pred CCccccccccccCccccceEE-EecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCe-E
Confidence 124555 577999999998864 3566778999999999999987 89999999999 9
Q ss_pred EEEECCCC---c-eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 242 RIFNTVDG---T-RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 242 ~vwd~~~~---~-~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
++||+.+. + ....+.. |...|++++|+|++++|++++.|++|+||+...
T Consensus 241 ~iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 241 FIWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99998763 1 1223444 677999999999999999999999999999864
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.7e-33 Score=264.47 Aligned_cols=278 Identities=10% Similarity=0.037 Sum_probs=218.9
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
..+++++|+|++++|++++ |+.|++|++.+...... +..+ .......+++++..+++++.| +.|++||+.+
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~--~~~~-~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 128 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKM--LKRA-DYTAVDTAKLQMRRFILGTTE-----GDIKVLDSNF 128 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTT--SCSC-CEEEEEEECSSSCEEEEEETT-----SCEEEECTTS
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeE--EecC-CceEEEEEecCCCEEEEEECC-----CCEEEEeCCC
Confidence 3455899999999999999 99999999986544322 2233 333444578888889998887 9999999999
Q ss_pred CcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeE
Q 015198 124 SRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQV 199 (411)
Q Consensus 124 ~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i 199 (411)
++.+..+. |...|.+++|+|++.+++ .|+.|++||+.+++.+..+..|...+..+++ ++++.+|++ ++.||.|
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~l~s-~~~d~~v 205 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAI--IDRGRNVLS-ASLDGTI 205 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEE--ETTTTEEEE-EETTSCE
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEE--cCCCCEEEE-EcCCCcE
Confidence 98888765 999999999999998777 6899999999999999999888875555555 455667765 6689999
Q ss_pred EEEEcCC-cceEEEec---cc---------------------cceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEE
Q 015198 200 RIEHFGL-NMIKLINA---HD---------------------SHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQE 254 (411)
Q Consensus 200 ~i~~~~~-~~~~~~~~---~~---------------------~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~ 254 (411)
++|+... +.+..+.. |. ..+.+++|+|++++|++++.||. |++||+++++.+..
T Consensus 206 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 206 RLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEE
T ss_pred EEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEE
Confidence 9998764 55555554 22 44555666899999999999999 99999999998887
Q ss_pred EeCCCCCcceEEEEeCCCCC-EEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCC
Q 015198 255 VRRGVDRAEIYSIALSPNVQ-WLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGS 333 (411)
Q Consensus 255 ~~~~~~~~~v~~l~~spdg~-~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (411)
+... |...|.+++|+|+++ +|++++.||.|++||++++++..
T Consensus 285 ~~~~-~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~------------------------------------ 327 (420)
T 3vl1_A 285 LPSK-FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV------------------------------------ 327 (420)
T ss_dssp ECCT-TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS------------------------------------
T ss_pred cccc-cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch------------------------------------
Confidence 7654 678999999999999 99999999999999999876421
Q ss_pred cccccccccCcccccccceEEEEe-CCCceEEEEEccCCEEEEEEeCCcEEEEEEecC
Q 015198 334 SLSFMRGVLPKYFSSEWSFAQFHI-PEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDPV 390 (411)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~ 390 (411)
..+.. +...+..+.+.+.+.|++++.||.+++|.+...
T Consensus 328 -------------------~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 328 -------------------GEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp -------------------EEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred -------------------hhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 13333 233455555554467788888999999999863
No 46
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=252.69 Aligned_cols=243 Identities=16% Similarity=0.259 Sum_probs=186.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCc-----ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFK-----ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
+|.+.|.+++|+|++++|++|+ |+.|+||+++... ......+.+|...+.++.|+|++.++++++.| +.
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~ 130 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KS 130 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SC
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CE
Confidence 4999999999999999999999 9999999985321 12233455788889999999999999999988 99
Q ss_pred EEEEECCC----CcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCc--eeeEEEeccCCCcceEEEccCCC
Q 015198 116 VIIWDDHQ----SRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDL--KLLHQIETLANLRGLCCLSHHSS 185 (411)
Q Consensus 116 i~vwd~~~----~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 185 (411)
|++||+.. .+++..+. |...|.+++|+|++.+++ .|+.|++||+.++ +++..+..|...+..+.++++..
T Consensus 131 v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 131 VWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEG 210 (330)
T ss_dssp EEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSS
T ss_pred EEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCC
Confidence 99999843 24566666 899999999999998887 6999999998766 67788888888666666666544
Q ss_pred ceEEEEecCCCCeEEEEEcCCc---------ceEEEec-cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc--eEE
Q 015198 186 TSVLACPGLQRGQVRIEHFGLN---------MIKLINA-HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT--RLQ 253 (411)
Q Consensus 186 ~~~l~~~g~~dg~i~i~~~~~~---------~~~~~~~-~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~--~~~ 253 (411)
+..|++ |+.|+.|++|+.... ....+.. |...|.+++|++++ +|++++.||. |++||..+++ .+.
T Consensus 211 ~~~l~s-~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 211 VFRLCS-GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEWKVFA 287 (330)
T ss_dssp SCEEEE-EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEEEEEE
T ss_pred eeEEEE-EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCceEEEe
Confidence 666665 668999999987542 2333344 89999999999766 7999999999 9999998774 233
Q ss_pred EEeCCCCCc-ceEEEEeCC--CCCEEEEEeCCCcEEEEEcccc
Q 015198 254 EVRRGVDRA-EIYSIALSP--NVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 254 ~~~~~~~~~-~v~~l~~sp--dg~~l~s~s~dg~I~vwd~~~~ 293 (411)
.... .|.. .|.+++|+| ++++|++++.||+|+||++++.
T Consensus 288 ~~~~-~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~~ 329 (330)
T 2hes_X 288 KRAL-CHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEKA 329 (330)
T ss_dssp EESC-TTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC---
T ss_pred cccc-ccccceEEEEEEecCCCceEEEEecCCCcEEEEEeccC
Confidence 3322 2665 899999999 7899999999999999998753
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=270.53 Aligned_cols=248 Identities=13% Similarity=0.178 Sum_probs=205.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCC--cceEEeecCCCCEEEEEEeccCC-eEEEEecCCCCCCCCCeE
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPF--KETFRRDLKSGGFRIVEMLFRCN-ILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~~~d~~i 116 (411)
..|...|.+++|+|++++|++|+ |+.|++|++... .......+..|...+.++.|+++ +.++++++.| +.|
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----g~v 138 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN-----GEI 138 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-----SCE
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-----CeE
Confidence 46889999999999999999999 999999999862 12233345578888999999998 7888888887 999
Q ss_pred EEEECCCCc------EEEEE----eecCceeEEEEcCC-eEEEE---EcCeEEEEEcCCceeeEEEeccCC----CcceE
Q 015198 117 IIWDDHQSR------CIGEF----AFRSDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLKLLHQIETLAN----LRGLC 178 (411)
Q Consensus 117 ~vwd~~~~~------~~~~~----~~~~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~ 178 (411)
++||+.+++ ....+ .|...|.+++|+|+ +.+++ .|+.|++||+++++.+..+..+.. ...+.
T Consensus 139 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~ 218 (416)
T 2pm9_A 139 FIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS 218 (416)
T ss_dssp EBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE
T ss_pred EEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE
Confidence 999998886 33333 37889999999998 55555 799999999999999888876521 22455
Q ss_pred EEccCCCc-eEEEEecCCCC---eEEEEEcCC--cceEEEe-ccccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCc
Q 015198 179 CLSHHSST-SVLACPGLQRG---QVRIEHFGL--NMIKLIN-AHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGT 250 (411)
Q Consensus 179 ~~~~~~~~-~~l~~~g~~dg---~i~i~~~~~--~~~~~~~-~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~ 250 (411)
++.+++++ .++++ ++.++ .|++|+... ..+..+. +|...|.+++|+| ++++|++++.|+. |++||+++++
T Consensus 219 ~~~~~~~~~~~l~~-~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~~~ 296 (416)
T 2pm9_A 219 VVEWHPKNSTRVAT-ATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPESAE 296 (416)
T ss_dssp EEEECSSCTTEEEE-EECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSSCC
T ss_pred EEEECCCCCCEEEE-EECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCCCc
Confidence 55566655 34544 56787 999999875 4567777 8999999999999 9999999999999 9999999999
Q ss_pred eEEEEeCCCCCcceEEEEeCCCC-CEEEEEeCCCcEEEEEccccccCC
Q 015198 251 RLQEVRRGVDRAEIYSIALSPNV-QWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 251 ~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
.+..+.. |...|.+++|+|++ .+|++++.||.|+||++.+++...
T Consensus 297 ~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 297 QLSQFPA--RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp EEEEEEC--SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred cceeecC--CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 9999988 78899999999999 899999999999999999887543
No 48
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.4e-32 Score=251.60 Aligned_cols=240 Identities=14% Similarity=0.193 Sum_probs=200.3
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc----eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE----TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
....|...|.+++|+|+|.+|++|+ |+.+++|++..... .....+..|...+..+.|++++..+++++.|
T Consensus 101 ~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D----- 175 (354)
T 2pbi_B 101 AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD----- 175 (354)
T ss_dssp EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT-----
T ss_pred EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC-----
Confidence 3456788999999999999999999 99999999864211 1112233577788899999999888888888
Q ss_pred CeEEEEECCCCcEEEEEe-ecCceeEEEEcC--CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCce
Q 015198 114 TKVIIWDDHQSRCIGEFA-FRSDVRSVKLSR--DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTS 187 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~--~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (411)
++|++||+++++.+..+. |...|.++.++| ++.+++ .|+.|++||+++++++..+..|...+.. +.++|++.
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~--v~~~p~~~ 253 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNS--VRYYPSGD 253 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE--EEECTTSS
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEE--EEEeCCCC
Confidence 999999999999999988 899999999987 455555 6999999999999999999888875554 44555666
Q ss_pred EEEEecCCCCeEEEEEcCCc-ceEEEecc--ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcce
Q 015198 188 VLACPGLQRGQVRIEHFGLN-MIKLINAH--DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEI 264 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~~-~~~~~~~~--~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v 264 (411)
+|++ |+.|+.|++|+.... .+..+..+ ...+.+++|+|+|++|++|+.|+. |++||+.+++.+..+.+ |...|
T Consensus 254 ~l~s-~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~~--h~~~v 329 (354)
T 2pbi_B 254 AFAS-GSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILFG--HENRV 329 (354)
T ss_dssp EEEE-EETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEECC--CSSCE
T ss_pred EEEE-EeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEEC--CCCcE
Confidence 7765 668999999998754 33344332 347889999999999999999999 99999999999988887 88899
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEE
Q 015198 265 YSIALSPNVQWLAVASDKGTVHIFS 289 (411)
Q Consensus 265 ~~l~~spdg~~l~s~s~dg~I~vwd 289 (411)
.+++|+|||++|++|+.|++|+||+
T Consensus 330 ~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 330 STLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999996
No 49
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-32 Score=260.47 Aligned_cols=250 Identities=14% Similarity=0.183 Sum_probs=199.0
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCC---Ccce-EEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 41 DVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEP---FKET-FRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 41 ~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
.+|.+.|++++|+| ++++|++|+ |+.|+|||+.+ .... ....+ .|...+.++.|++++..+++++.| +
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d-----g 133 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD-----G 133 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT-----S
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC-----C
Confidence 88999999999999 999999999 99999999875 2211 11222 467789999999999999999988 9
Q ss_pred eEEEEECC---CCcEEEEEe-------------ecCceeEEE--EcCCeEEEE---EcCeEEEEEcCCceeeEEEec--c
Q 015198 115 KVIIWDDH---QSRCIGEFA-------------FRSDVRSVK--LSRDRIVVV---LEHKIYVYSFVDLKLLHQIET--L 171 (411)
Q Consensus 115 ~i~vwd~~---~~~~~~~~~-------------~~~~i~~~~--~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~--~ 171 (411)
.|++||+. +++.+..+. +...+.++. +++++.+++ .|+.|++||+++++.+..+.. |
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h 213 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPR 213 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCC
Confidence 99999984 666555443 233455555 456777777 689999999999999999987 5
Q ss_pred CCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEe-ccccceeEEEec----CCCCEEEEEcCCCeEEEEEE
Q 015198 172 ANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLIN-AHDSHIACFTLT----LDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 172 ~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~-~~~~~i~~l~~s----p~g~~l~s~s~dg~~I~vwd 245 (411)
.. .+.++.+++++.+|++ |+.||.|++|+... +.+..+. .|...|.+++|+ +++.+|++++.|+. |++||
T Consensus 214 ~~--~v~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iwd 289 (437)
T 3gre_A 214 HG--AVSSICIDEECCVLIL-GTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIWN 289 (437)
T ss_dssp GC--CEEEEEECTTSCEEEE-EETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEEE
T ss_pred CC--ceEEEEECCCCCEEEE-EcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EEEEE
Confidence 55 4555666666777775 66899999999765 4556665 788899999555 56889999999999 99999
Q ss_pred CCCCceEEEEeCCC------------------------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCC
Q 015198 246 TVDGTRLQEVRRGV------------------------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSS 301 (411)
Q Consensus 246 ~~~~~~~~~~~~~~------------------------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~ 301 (411)
+++++.+..+..+. |...|++++|+ ++++|++++.|+.|++||+.+++....+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 99999988887532 55678999999 779999999999999999999987654443
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.8e-32 Score=275.94 Aligned_cols=284 Identities=13% Similarity=0.154 Sum_probs=236.6
Q ss_pred ccccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 37 TAFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....+|.+.|.+++|+|++++|++|+ +|.|+|||+.+....... ..+...+.++.|++++..+++++.| +.
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d-----g~ 78 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSI--QVTETPVRAGKFIARKNWIIVGSDD-----FR 78 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEE--ECCSSCEEEEEEEGGGTEEEEEETT-----SE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEE--ecCCCcEEEEEEeCCCCEEEEEeCC-----Ce
Confidence 345788999999999999999999999 999999999886554443 3778889999999999999998888 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCc-eeeEEEeccCCCcceEEEccCC-CceEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDL-KLLHQIETLANLRGLCCLSHHS-STSVL 189 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~l 189 (411)
|++||+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+.++ .....+..|...+. ++.++| ++..+
T Consensus 79 i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~--~~~~~p~~~~~l 156 (814)
T 3mkq_A 79 IRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVM--CVAFNPKDPSTF 156 (814)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEE--EEEEETTEEEEE
T ss_pred EEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEE--EEEEEcCCCCEE
Confidence 9999999999999988 899999999999998777 6899999999876 67777777777544 445555 45566
Q ss_pred EEecCCCCeEEEEEcCC-cceEEEeccc-cceeEEEecC--CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceE
Q 015198 190 ACPGLQRGQVRIEHFGL-NMIKLINAHD-SHIACFTLTL--DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIY 265 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~-~~~~~~~~~~-~~i~~l~~sp--~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~ 265 (411)
++ ++.||.|++|+... .....+..+. ..+.+++|+| ++.+|++++.||. |++||+.+++.+..+.. |...|.
T Consensus 157 ~~-~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~--~~~~v~ 232 (814)
T 3mkq_A 157 AS-GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVS 232 (814)
T ss_dssp EE-EETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEEC--CSSCEE
T ss_pred EE-EeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcC--CCCCEE
Confidence 55 66899999998754 4455555554 8999999999 9999999999999 99999999999999987 788999
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcc
Q 015198 266 SIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKY 345 (411)
Q Consensus 266 ~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (411)
+++|+|++++|++++.||.|++||+.+++...
T Consensus 233 ~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~------------------------------------------------ 264 (814)
T 3mkq_A 233 FAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK------------------------------------------------ 264 (814)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEETTTCSEEE------------------------------------------------
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE------------------------------------------------
Confidence 99999999999999999999999998876432
Q ss_pred cccccceEEEEeCCCceEEEEEccCCE--EEEEEeCCcEEEEEEec
Q 015198 346 FSSEWSFAQFHIPEVTHFIAAFGSQNT--VVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~dg~~~~~~~~~ 389 (411)
.+..+......++|++++. +++++.++.+.+|.+..
T Consensus 265 --------~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 265 --------TLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp --------EECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred --------EeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 3333445667788888843 67788888888887654
No 51
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.9e-32 Score=251.82 Aligned_cols=248 Identities=16% Similarity=0.187 Sum_probs=199.5
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc--eEEeecCCCCEEEEEEeccC--CeEEEEecCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE--TFRRDLKSGGFRIVEMLFRC--NILALVGAGDNSQYP 112 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~~~ 112 (411)
....+|.+.|++++|+|++++|++|+ ||.|+||++.+... .....+..|...+.++.|++ ++..+++++.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d---- 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD---- 80 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT----
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC----
Confidence 34679999999999999999999999 99999999986432 23334557888899999998 58888888887
Q ss_pred CCeEEEEECCCC---------cEEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCceeeEEEe--------
Q 015198 113 PTKVIIWDDHQS---------RCIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLKLLHQIE-------- 169 (411)
Q Consensus 113 d~~i~vwd~~~~---------~~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~~~~~~~-------- 169 (411)
+.|++||+.++ +.+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+..+.
T Consensus 81 -g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 81 -KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp -SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred -CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 99999999887 4566665 8999999999998 77666 68999999998776544332
Q ss_pred -----ccCCCcceEEEccCCC---ceEEEEecCCCCeEEEEEcCCcc---eEEEeccccceeEEEecCCC----CEEEEE
Q 015198 170 -----TLANLRGLCCLSHHSS---TSVLACPGLQRGQVRIEHFGLNM---IKLINAHDSHIACFTLTLDG----LLLATA 234 (411)
Q Consensus 170 -----~~~~~~~~~~~~~~~~---~~~l~~~g~~dg~i~i~~~~~~~---~~~~~~~~~~i~~l~~sp~g----~~l~s~ 234 (411)
.+.. .+.++.++++ +..+++ ++.++.+.+|...... +..+.+|...|.+++|+|++ ++|+++
T Consensus 160 ~~~~~~~~~--~~~~~~~~p~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 160 SIPPANHLQ--SDFCLSWCPSRFSPEKLAV-SALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp SCCCSSCSC--CCEEEEECCCSSSCCEEEE-EETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred ccccCCccc--ceeEEEeccCCCCCcEEEE-ecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 2333 3444555443 556665 5578888776655443 55667899999999999998 899999
Q ss_pred cCCCeEEEEEECCCC----------------------------------------------ceEEEEeCCCCCcceEEEE
Q 015198 235 STRGTLIRIFNTVDG----------------------------------------------TRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 235 s~dg~~I~vwd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~l~ 268 (411)
+.||. |++||++++ +.+..+.. |...|++++
T Consensus 237 ~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~ 313 (351)
T 3f3f_A 237 CKDGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGEVWSVS 313 (351)
T ss_dssp ETTSC-EEEEEEEECC---------------------------------------CCSEEEEEEEEECT--TSSCEEEEE
T ss_pred cCCCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEec--ccccEEEEE
Confidence 99999 999999875 45556666 788999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 269 LSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
|+|++++|++++.||.|+||++.+++..
T Consensus 314 ~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 341 (351)
T 3f3f_A 314 WNLTGTILSSAGDDGKVRLWKATYSNEF 341 (351)
T ss_dssp ECSSSCCEEEEETTSCEEEEEECTTSCE
T ss_pred EcCCCCEEEEecCCCcEEEEecCcCcch
Confidence 9999999999999999999999988654
No 52
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.8e-32 Score=250.55 Aligned_cols=197 Identities=16% Similarity=0.150 Sum_probs=158.8
Q ss_pred EEEEeccCCeEEE--EecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceee
Q 015198 90 IVEMLFRCNILAL--VGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLL 165 (411)
Q Consensus 90 ~~~~~~~~~~~~l--~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~ 165 (411)
+..++|+|++.++ ++++.| ++|+|||+.+++++..+.|...|.+++|+|++.+++ .++.+++|+..+++.+
T Consensus 136 ~~~v~fSpDg~~la~as~~~d-----~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVP-----AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSS-----CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEEECCCC-----CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 3456788887654 566666 999999999999999999999999999999999988 6788889988888776
Q ss_pred EEEeccCCCcceEEEccCCCceEEEEecCCCC----eEEEEEcCCc-----ceEEEeccccceeEEEecCCCCEEEEEcC
Q 015198 166 HQIETLANLRGLCCLSHHSSTSVLACPGLQRG----QVRIEHFGLN-----MIKLINAHDSHIACFTLTLDGLLLATAST 236 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg----~i~i~~~~~~-----~~~~~~~~~~~i~~l~~sp~g~~l~s~s~ 236 (411)
...........+.++.+++++..+++++ .++ .+++|+.... ....+.+|...|++++|+|+|++||+|+.
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s-~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAAS-LKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEE-ESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEe-cCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 5543333333455666666777777643 444 4555765432 23456789999999999999999999999
Q ss_pred CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 237 RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 237 dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
|+. |+|||+++++++.++..+ |...|++++|+|||++||+++.|++|+|||+..+-
T Consensus 290 D~~-V~iwd~~~~~~~~~~~~g-H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 290 DNS-IALVKLKDLSMSKIFKQA-HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp TSC-EEEEETTTTEEEEEETTS-SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred CCE-EEEEECCCCcEEEEecCc-ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 999 999999999999887433 88999999999999999999999999999997553
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.8e-32 Score=256.81 Aligned_cols=287 Identities=9% Similarity=0.048 Sum_probs=224.5
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
..+....|++++++|++|+ |+.|++||+.+... ...+..|...+.++.|++++..+++++.| +.|++||+.+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~ 170 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ--REIDQAHVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKD 170 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEE--EEETTSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcce--eeecccccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 4455567899999999999 99999999986443 33345788899999999999999999988 9999999999
Q ss_pred CcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccC---CCcceE------------------
Q 015198 124 SRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLA---NLRGLC------------------ 178 (411)
Q Consensus 124 ~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~------------------ 178 (411)
++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..+. ..+..+
T Consensus 171 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 171 GSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred CcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 99998888 899999999999998777 68999999999999998887532 222222
Q ss_pred -EEccCCCceEEEEecCCCCeEEEEEcCCc-ceEEE-eccccceeEEEecCCCC-EEEEEcCCCeEEEEEECCCCce-EE
Q 015198 179 -CLSHHSSTSVLACPGLQRGQVRIEHFGLN-MIKLI-NAHDSHIACFTLTLDGL-LLATASTRGTLIRIFNTVDGTR-LQ 253 (411)
Q Consensus 179 -~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~-~~~~~~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~~~~~~-~~ 253 (411)
++.+++++.+|++ |+.||.|++|+.... .+..+ ..|...|.+++|+|++. +|++++.||. |++||+++++. +.
T Consensus 251 ~~~~~s~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 251 NNLEFGTYGKYVIA-GHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVG 328 (420)
T ss_dssp CTTCSSCTTEEEEE-EETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSE
T ss_pred cceEEcCCCCEEEE-EcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCchh
Confidence 3445677888876 668999999987653 34444 45789999999999999 9999999999 99999998754 66
Q ss_pred EEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCC
Q 015198 254 EVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGS 333 (411)
Q Consensus 254 ~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (411)
.+..+ +...|.++.+ +++++|++++.|+.|++|++..+.........
T Consensus 329 ~~~~~-~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~------------------------------- 375 (420)
T 3vl1_A 329 EFLIN-EGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEF------------------------------- 375 (420)
T ss_dssp EEEES-TTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECT-------------------------------
T ss_pred hhhcc-CCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceec-------------------------------
Confidence 67654 5668888865 57889999999999999999886543211100
Q ss_pred cccccccccCcccccccceEEEEeCCCceEEEEEccCC----EEEEEEeCCcEEEEEEec
Q 015198 334 SLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQN----TVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~dg~~~~~~~~~ 389 (411)
. ....+....+.+..++|++++ .|++++.+|.+.+|+++.
T Consensus 376 -----~-----------~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 376 -----E-----------TPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp -----T-----------SCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred -----c-----------CccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 0 000122223456678899883 599999999999998753
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-32 Score=253.73 Aligned_cols=250 Identities=13% Similarity=0.126 Sum_probs=201.3
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCC--eEEEEecCCCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCN--ILALVGAGDNSQYPPT 114 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~~~d~ 114 (411)
....+|.+.|++++|+|++++|++|+ ||.|+||++..........+..|...+.++.|+++ +.++++++.| +
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g 79 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----G 79 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----S
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----C
Confidence 34678999999999999999999999 99999999985444444456678888999999866 7888888887 9
Q ss_pred eEEEEECCCCc--EEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCcee--eEEEeccCCCcceEEEccCC
Q 015198 115 KVIIWDDHQSR--CIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLKL--LHQIETLANLRGLCCLSHHS 184 (411)
Q Consensus 115 ~i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~ 184 (411)
.|++||+.+++ .+..+. |...|.+++|+|+ +.+++ .|+.|++||+++++. ...+..|...+..+++.+..
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 555555 8899999999998 76666 699999999987743 33455666644444444421
Q ss_pred -----------CceEEEEecCCCCeEEEEEcCCc-----ceEEEeccccceeEEEecCC---CCEEEEEcCCCeEEEEEE
Q 015198 185 -----------STSVLACPGLQRGQVRIEHFGLN-----MIKLINAHDSHIACFTLTLD---GLLLATASTRGTLIRIFN 245 (411)
Q Consensus 185 -----------~~~~l~~~g~~dg~i~i~~~~~~-----~~~~~~~~~~~i~~l~~sp~---g~~l~s~s~dg~~I~vwd 245 (411)
++.++++ |+.||.|++|+.... ....+.+|...|.+++|+|+ +++|++++.||. |++||
T Consensus 160 ~~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iwd 237 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWT 237 (379)
T ss_dssp ----------CTTCEEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEEE
T ss_pred ccccccccCCCCCCEEEE-EeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEEe
Confidence 4667765 668999999987542 34567789999999999999 899999999999 99999
Q ss_pred CCCCc---eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 246 TVDGT---RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 246 ~~~~~---~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
++++. ....+....+...|.+++|+|++++|++++.||.|++|+++.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 289 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETT
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCC
Confidence 98875 22333333367799999999999999999999999999998654
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=266.63 Aligned_cols=242 Identities=9% Similarity=-0.008 Sum_probs=188.8
Q ss_pred CCCCeEEEEEcCCC---------CEEEE-------------------Ee-CCcEEEEecCCCcceE--EeecCCCCEEEE
Q 015198 43 DEIELISVSWNQDY---------GCFAA-------------------GT-SCGFRIYNCEPFKETF--RRDLKSGGFRIV 91 (411)
Q Consensus 43 h~~~V~~l~~s~~g---------~~la~-------------------g~-dg~i~iw~~~~~~~~~--~~~~~~~~~~~~ 91 (411)
+.+.|++|+|+|++ ++||+ ++ |++|+||++++.+... ...+..+...+.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~ 211 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVW 211 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEE
Confidence 56788899998876 56666 44 6789999998754322 122324456688
Q ss_pred EEeccCC------eEEEEecCCCCCCCCCeEEEEECCCCcE-----------EEEEe-ecCceeEEEEcCCeEEEE--Ec
Q 015198 92 EMLFRCN------ILALVGAGDNSQYPPTKVIIWDDHQSRC-----------IGEFA-FRSDVRSVKLSRDRIVVV--LE 151 (411)
Q Consensus 92 ~~~~~~~------~~~l~s~~~d~~~~d~~i~vwd~~~~~~-----------~~~~~-~~~~i~~~~~~~~~~~~~--~d 151 (411)
.+.|+|+ +.+|++++.| ++|++||+.+++. ...+. |...|.+++|++++.++. .|
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s~D-----gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~D 286 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVSQE-----GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKN 286 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEETT-----SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETT
T ss_pred EEEECCCCCCCCCCceEEEEecC-----CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCC
Confidence 8888886 5688988888 9999999877642 22444 788999999998876555 79
Q ss_pred CeEEEEEcCCce-eeEEEeccCCCcceEEEccCCCc-eEEEEecCCCCeEEEEEcCC-cceEEEecccc--ceeEEEecC
Q 015198 152 HKIYVYSFVDLK-LLHQIETLANLRGLCCLSHHSST-SVLACPGLQRGQVRIEHFGL-NMIKLINAHDS--HIACFTLTL 226 (411)
Q Consensus 152 g~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~--~i~~l~~sp 226 (411)
|+|++||+++++ ....+..|...+..+++.+.+++ .+|++ |+.|++|+||+... +....+.+|.. .|.+++|+|
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS-~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST-VAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE-EETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE-eccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 999999998764 45567888886666654666665 56664 67999999999764 55556666653 588999999
Q ss_pred CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 227 DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 227 ~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
+++.|++++.|+. |++||++++.++..+.+ |.+.|++++|+|+|++|++|+.||+|++||+..+
T Consensus 366 ~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 366 QIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp TTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 9999999999999 99999999998888887 8889999999999999999999999999998654
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.6e-31 Score=242.72 Aligned_cols=237 Identities=12% Similarity=0.226 Sum_probs=207.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
+|...|.+++|+|++++|++++ |+.|++|++++.+......+..+...+..+.|++++..+++++.+ +.|++||
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d 169 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWD 169 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEe
Confidence 7899999999999999999999 999999999886644444455777788999999999888888887 9999999
Q ss_pred CCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 121 DHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 121 ~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
+.+++.+..+. |...|.+++|+|++..++ .|+.|++||+++++.+..+.. .. .+.++.+++++.++++ ++.+
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~-~~--~v~~~~~s~~~~~l~~-~~~~ 245 (337)
T 1gxr_A 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF-TS--QIFSLGYCPTGEWLAV-GMES 245 (337)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-SS--CEEEEEECTTSSEEEE-EETT
T ss_pred CCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC-CC--ceEEEEECCCCCEEEE-EcCC
Confidence 99999998887 899999999999997777 689999999999988877753 33 4556666777778876 5589
Q ss_pred CeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEE
Q 015198 197 GQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWL 276 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 276 (411)
+.|++|+........+..|...|.+++|+|++++|++++.||. |++||+.+++.+.... |...|.+++|+|++++|
T Consensus 246 ~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l 321 (337)
T 1gxr_A 246 SNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYI 321 (337)
T ss_dssp SCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEE
T ss_pred CcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEec---CCCcEEEEEECCCCCEE
Confidence 9999999988888888999999999999999999999999999 9999999999886654 67789999999999999
Q ss_pred EEEeCCCcEEEEEcc
Q 015198 277 AVASDKGTVHIFSLR 291 (411)
Q Consensus 277 ~s~s~dg~I~vwd~~ 291 (411)
++++.||.|++|++.
T Consensus 322 ~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 322 VTGSGDKKATVYEVI 336 (337)
T ss_dssp EEEETTSCEEEEEEE
T ss_pred EEecCCCeEEEEEEe
Confidence 999999999999974
No 57
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9.2e-32 Score=248.37 Aligned_cols=242 Identities=13% Similarity=0.127 Sum_probs=193.1
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|...|.+++|+|++.+|++|+ |+.|+|||+.+.+.... +..|...+.++.|+|++..+++++.| +.|+
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d-----~~i~ 143 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE-----REIK 143 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT-----SCEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC-----CEEE
Confidence 4678999999999999999999999 99999999998655433 44788889999999999999999888 9999
Q ss_pred EEECCCCcEEEEE----eecCceeEEEEcCCe----------EEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEE
Q 015198 118 IWDDHQSRCIGEF----AFRSDVRSVKLSRDR----------IVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCL 180 (411)
Q Consensus 118 vwd~~~~~~~~~~----~~~~~i~~~~~~~~~----------~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 180 (411)
+||+.. +..... .|...|.+++|+|++ .+++ .|+.|++|| ...+....+..|... +.++
T Consensus 144 ~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~--v~~~ 219 (343)
T 2xzm_R 144 LWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESN--VNHL 219 (343)
T ss_dssp EEESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSC--EEEE
T ss_pred EEeccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCcccc--ceEE
Confidence 999874 333333 267889999999986 4444 699999999 456777788888774 4556
Q ss_pred ccCCCceEEEEecCCCCeEEEEEc-CCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEE--EEeC
Q 015198 181 SHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQ--EVRR 257 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~--~~~~ 257 (411)
++++++.+|++ |+.||.|++|+. ..........+...|.+++|+|++.+|+++ .|+. |++||+.+++... .+..
T Consensus 220 ~~s~~g~~l~s-gs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~-~d~~-v~iw~~~~~~~~~~~~~~~ 296 (343)
T 2xzm_R 220 SISPNGKYIAT-GGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVG-TDQG-VKIFNLMTQSKAPVCTIEA 296 (343)
T ss_dssp EECTTSSEEEE-EETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEE-ESSC-EEEEESSSCCSCSEEECCC
T ss_pred EECCCCCEEEE-EcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEE-CCCC-EEEEEeCCCCCCceEEeec
Confidence 66667778876 668999999997 333333333456779999999999987755 5778 9999998876543 3331
Q ss_pred C---------CCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 258 G---------VDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 258 ~---------~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
. .|...|.+++|+|+|++|++|+.||.|++|++++++
T Consensus 297 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 297 EPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp CSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 0 266789999999999999999999999999998875
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1e-31 Score=253.00 Aligned_cols=249 Identities=12% Similarity=0.149 Sum_probs=201.4
Q ss_pred cccCCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcceEEeec-----------CCCCEEEEEEeccC-CeEEEE
Q 015198 38 AFSDVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKETFRRDL-----------KSGGFRIVEMLFRC-NILALV 103 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~-~~~~l~ 103 (411)
....+|.+.|++++|+| ++++|++|+ ||.|++|++++......... ..+...+.++.|++ ++..++
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 116 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE
Confidence 34667999999999999 999999999 99999999987544332211 24778899999999 667788
Q ss_pred ecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCe---EEEE---EcCeEEEEEcCCceeeEEEeccCCCcce
Q 015198 104 GAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDR---IVVV---LEHKIYVYSFVDLKLLHQIETLANLRGL 177 (411)
Q Consensus 104 s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 177 (411)
+++.| +.|++||+.+++.+..+.+...+.++.+.+.+ .+++ .|+.|++||+++++.+..+..|...+.
T Consensus 117 s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~- 190 (408)
T 4a11_B 117 SSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL- 190 (408)
T ss_dssp EEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE-
T ss_pred EEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE-
Confidence 88877 99999999999999999999999999999854 3555 789999999999999999988877544
Q ss_pred EEEccCCCceEEEEecCCCCeEEEEEcCCc--ceEEE---------------eccccceeEEEecCCCCEEEEEcCCCeE
Q 015198 178 CCLSHHSSTSVLACPGLQRGQVRIEHFGLN--MIKLI---------------NAHDSHIACFTLTLDGLLLATASTRGTL 240 (411)
Q Consensus 178 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~~~~---------------~~~~~~i~~l~~sp~g~~l~s~s~dg~~ 240 (411)
++.+++++..++++|+.||.|++|+.... .+..+ ..|...|.+++|+|++++|++++.|+.
T Consensus 191 -~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~- 268 (408)
T 4a11_B 191 -AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR- 268 (408)
T ss_dssp -EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC-
T ss_pred -EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe-
Confidence 45555555543345778999999987643 23333 578899999999999999999999999
Q ss_pred EEEEECCCC-----------------------------------------------ceEEEEeCCCCCcceEEEEeCCCC
Q 015198 241 IRIFNTVDG-----------------------------------------------TRLQEVRRGVDRAEIYSIALSPNV 273 (411)
Q Consensus 241 I~vwd~~~~-----------------------------------------------~~~~~~~~~~~~~~v~~l~~spdg 273 (411)
|++||+.++ +.+..+.. |...|.+++|+|++
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNF 346 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTT
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCC
Confidence 999998764 33445555 77899999999999
Q ss_pred CEEEEEeCCCcEEEEEccccccC
Q 015198 274 QWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 274 ~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
++|++++.||.|++||+++++..
T Consensus 347 ~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp TEEEEEETTSCEEEEEECC----
T ss_pred CEEEEECCCCeEEEEeCCCCCcc
Confidence 99999999999999999998754
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-30 Score=246.37 Aligned_cols=281 Identities=14% Similarity=0.099 Sum_probs=222.2
Q ss_pred cCCCCCC--eEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 40 SDVDEIE--LISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 40 ~~~h~~~--V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
..+|... +.+++|++ ..+++++ |+.|++|++++......... .+...+.++.|++++..+++++.| +.|
T Consensus 87 ~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~~d-----g~i 158 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSVGLGN-----GLV 158 (401)
T ss_dssp CTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEEEETT-----SCE
T ss_pred CCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEEECCC-----CeE
Confidence 3466655 44566665 4455556 99999999998665554443 467889999999999999998887 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcC-CceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFV-DLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
++||+.+++.+..+. |...|.+++|+++....+ .|+.|++||++ ..+.+..+..|... +.++.+++++.+|++ |
T Consensus 159 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~s-~ 235 (401)
T 4aez_A 159 DIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSE--VCGLAWRSDGLQLAS-G 235 (401)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEE-E
T ss_pred EEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCC--eeEEEEcCCCCEEEE-E
Confidence 999999999999987 899999999977644444 79999999998 46677788888774 455555666777776 6
Q ss_pred CCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCC-EEEEEc--CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEe
Q 015198 194 LQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGL-LLATAS--TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIAL 269 (411)
Q Consensus 194 ~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~-~l~s~s--~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~ 269 (411)
+.||.|++|+... ..+..+..|...|.+++|+|++. ++++++ .|+. |++||+.+++.+..+. +...|.+++|
T Consensus 236 ~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~---~~~~v~~~~~ 311 (401)
T 4aez_A 236 GNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVD---AGSQVTSLIW 311 (401)
T ss_dssp ETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEE
T ss_pred eCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEe---CCCcEEEEEE
Confidence 6899999998764 56677888999999999999774 666655 7999 9999999999998887 5568999999
Q ss_pred CCCCCEEEEEe--CCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccc
Q 015198 270 SPNVQWLAVAS--DKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFS 347 (411)
Q Consensus 270 spdg~~l~s~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (411)
+|++++|++++ .||.|+|||+.+++...
T Consensus 312 s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~-------------------------------------------------- 341 (401)
T 4aez_A 312 SPHSKEIMSTHGFPDNNLSIWSYSSSGLTK-------------------------------------------------- 341 (401)
T ss_dssp CSSSSEEEEEECTTTCEEEEEEEETTEEEE--------------------------------------------------
T ss_pred CCCCCeEEEEeecCCCcEEEEecCCcccee--------------------------------------------------
Confidence 99999999854 89999999998865321
Q ss_pred cccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 348 SEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
...+.-+...+..++|+++ ..|++++.||.|++|++..
T Consensus 342 ----~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 342 ----QVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp ----EEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ----EEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 0122333456667899998 6788888899999999986
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.2e-31 Score=251.85 Aligned_cols=275 Identities=14% Similarity=0.215 Sum_probs=221.1
Q ss_pred cccCCCCCCe-EEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 38 AFSDVDEIEL-ISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 38 ~~~~~h~~~V-~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
....+|...| .++.+ ++++|++|+ ||.|++||+.+.+.... +..|...+.++.|++++ .+++++.| +.
T Consensus 115 ~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~--~~~h~~~V~~l~~~~~~-~l~s~s~d-----g~ 184 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQ--LSGHDGGVWALKYAHGG-ILVSGSTD-----RT 184 (464)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECSTT-EEEEEETT-----SC
T ss_pred EEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEE--EeCCCcCEEEEEEcCCC-EEEEEeCC-----CC
Confidence 3567888875 66666 567999999 99999999987654433 44788899999999888 77777777 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEc--CCeEEEE---EcCeEEEEEcCCcee-----------------------eE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLS--RDRIVVV---LEHKIYVYSFVDLKL-----------------------LH 166 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~--~~~~~~~---~dg~i~iwd~~~~~~-----------------------~~ 166 (411)
|++||+.+++.+..+. |...|.+++|+ +++.+++ .|+.|++||+++++. +.
T Consensus 185 i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 185 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 9999999999999988 89999999998 5666666 699999999987653 33
Q ss_pred EEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEE
Q 015198 167 QIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd 245 (411)
.+..|.. .+.++.++ +.++++ |+.||.|++|+.. .+.+..+.+|...|.+++|+|++++|++++.|+. |++||
T Consensus 265 ~~~~~~~--~v~~~~~~--~~~l~~-~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd 338 (464)
T 3v7d_B 265 VLRGHMA--SVRTVSGH--GNIVVS-GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWD 338 (464)
T ss_dssp EECCCSS--CEEEEEEE--TTEEEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEE
T ss_pred EccCccc--eEEEEcCC--CCEEEE-EeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEE
Confidence 3444444 44555544 346655 6689999999875 4667788899999999999999999999999999 99999
Q ss_pred CCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCC
Q 015198 246 TVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISP 325 (411)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (411)
+++++.+..+.. |...|.+++|+ +.+|++++.||.|++||+.++....
T Consensus 339 ~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~---------------------------- 386 (464)
T 3v7d_B 339 LENGELMYTLQG--HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKF---------------------------- 386 (464)
T ss_dssp TTTTEEEEEECC--CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEE----------------------------
T ss_pred CCCCcEEEEEeC--CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceee----------------------------
Confidence 999999999988 88899999997 5899999999999999998865321
Q ss_pred CCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 326 STGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
.++ .......++|++++.+++++.||.+++|++..
T Consensus 387 ----------------------------~~~-~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 387 ----------------------------SYH-HTNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp ----------------------------EEE-CTTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred ----------------------------eec-CCCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 111 12344567788887777777799999998875
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-31 Score=246.95 Aligned_cols=288 Identities=10% Similarity=0.101 Sum_probs=225.9
Q ss_pred CCCccccCCCCCCeEEEEEcCC---CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCC
Q 015198 34 HPQTAFSDVDEIELISVSWNQD---YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS 109 (411)
Q Consensus 34 ~~~~~~~~~h~~~V~~l~~s~~---g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 109 (411)
........+|.+.|++++|+|+ |++|++|+ ||.|+||++++........+..|...+.++.|++++..+++++.|
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d- 107 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD- 107 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-
T ss_pred cceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-
Confidence 3344567899999999999999 69999999 999999999874444434455788889999999999999999888
Q ss_pred CCCCCeEEEEECCCCcEEEEEeecCceeEEEE--cCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCC
Q 015198 110 QYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKL--SRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHS 184 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (411)
+.|++||+.+++.+....|...|.+++| ++++.+++ .|+.|++||+++++.+..+..+. ...++.+.+
T Consensus 108 ----g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~ 180 (368)
T 3mmy_A 108 ----KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE---RCYCADVIY 180 (368)
T ss_dssp ----SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS---CEEEEEEET
T ss_pred ----CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC---CceEEEecC
Confidence 9999999999998887789999999999 89988776 68999999999999998888765 345555554
Q ss_pred CceEEEEecCCCCeEEEEEcCCcceEEE---eccccceeEEEecCCCCE----EEEEcCCCeEEEEEECCCC---ceEEE
Q 015198 185 STSVLACPGLQRGQVRIEHFGLNMIKLI---NAHDSHIACFTLTLDGLL----LATASTRGTLIRIFNTVDG---TRLQE 254 (411)
Q Consensus 185 ~~~~l~~~g~~dg~i~i~~~~~~~~~~~---~~~~~~i~~l~~sp~g~~----l~s~s~dg~~I~vwd~~~~---~~~~~ 254 (411)
+ .+++ +..++.+.+|+......... ..+...+.++++.++... +++++.|+. |++||++.. +.+..
T Consensus 181 ~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 181 P--MAVV-ATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFT 256 (368)
T ss_dssp T--EEEE-EEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEE
T ss_pred C--eeEE-EeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCcccccee
Confidence 4 3333 44789999998876433222 223455566666655544 999999999 999999887 55667
Q ss_pred EeCCCCCc------------ceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccc
Q 015198 255 VRRGVDRA------------EIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTL 322 (411)
Q Consensus 255 ~~~~~~~~------------~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (411)
+.. |.. .|.+++|+|++++|++++.||.|+|||+++++....
T Consensus 257 ~~~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~------------------------ 310 (368)
T 3mmy_A 257 FKC--HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKT------------------------ 310 (368)
T ss_dssp EEC--SEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEE------------------------
T ss_pred eee--eecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEE------------------------
Confidence 776 544 699999999999999999999999999998875432
Q ss_pred cCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEecCC
Q 015198 323 ISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDPVH 391 (411)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~~~ 391 (411)
+..+...+..++|+++ ..|++++.||....|.+...+
T Consensus 311 --------------------------------~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 311 --------------------------------SEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp --------------------------------CCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred --------------------------------ecCCCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence 2222345677899998 678888888877766655433
No 62
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.5e-31 Score=238.84 Aligned_cols=239 Identities=12% Similarity=0.125 Sum_probs=197.0
Q ss_pred eEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 47 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 47 V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
+++|+||+++ +||+|.|++|+|||+++++......++.|...+.++.|++++.++++++.| +.|++||+++++.
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCcee
Confidence 5789999986 888888999999999987766666667888889999999999999999988 9999999999887
Q ss_pred EEEEe-e-----------------------------------------cCceeEEEEcCCeEEEE---EcCeEEEEEcCC
Q 015198 127 IGEFA-F-----------------------------------------RSDVRSVKLSRDRIVVV---LEHKIYVYSFVD 161 (411)
Q Consensus 127 ~~~~~-~-----------------------------------------~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~ 161 (411)
+..+. | ...+..+.+.+++.+++ .|+.|++||+++
T Consensus 102 ~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 66654 2 23456666777776666 689999999987
Q ss_pred cee----eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEc--
Q 015198 162 LKL----LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAS-- 235 (411)
Q Consensus 162 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s-- 235 (411)
++. ......+...+....+.+.....+...+++.++.|++|+...........+...+..+.|+|++..+++++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~ 261 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGF 261 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECT
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEc
Confidence 653 33444455555556666655554555668899999999998888777788899999999999999877654
Q ss_pred CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 236 TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 236 ~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.|+. |++||+++++++.++.+ |.+.|++++|+|||++|++|+.||+|+|||+.+.+
T Consensus 262 ~d~~-i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 262 AQNQ-LVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp TTCC-EEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred CCCE-EEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 7899 99999999999999998 88999999999999999999999999999997654
No 63
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6e-31 Score=239.42 Aligned_cols=242 Identities=14% Similarity=0.230 Sum_probs=203.1
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++|+ |+.|++||+++.+.... +..|...+.++.|++++..+++++.| +.|
T Consensus 59 ~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i 131 (312)
T 4ery_A 59 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESV 131 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCE
T ss_pred hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC-----CcE
Confidence 34678999999999999999999999 99999999997655443 34777889999999999999999988 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
++||+++++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..... ..+..+.+++++.+|++
T Consensus 132 ~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~- 209 (312)
T 4ery_A 132 RIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILA- 209 (312)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEE-
T ss_pred EEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEE-
Confidence 999999999998887 889999999999998777 699999999999888877643322 23455666667778776
Q ss_pred cCCCCeEEEEEcCC-cceEEEeccccceeE---EEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 193 GLQRGQVRIEHFGL-NMIKLINAHDSHIAC---FTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 193 g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~---l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
++.|+.|++|+... +.+..+.+|...+.+ ....+++.+|++|+.||. |++||+.+++.+..+.+ |...|.+++
T Consensus 210 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~--h~~~v~~~~ 286 (312)
T 4ery_A 210 ATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQG--HTDVVISTA 286 (312)
T ss_dssp EETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEECC--CSSCEEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhhc--cCCcEEEEe
Confidence 56899999998764 556677777665332 333478899999999999 99999999999999988 888999999
Q ss_pred eCCCCCEEEEEe--CCCcEEEEEcc
Q 015198 269 LSPNVQWLAVAS--DKGTVHIFSLR 291 (411)
Q Consensus 269 ~spdg~~l~s~s--~dg~I~vwd~~ 291 (411)
|+|++++|++++ .|++|++|+.+
T Consensus 287 ~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 287 CHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp ECSSSSEEEEEECTTTCCEEEEECC
T ss_pred ecCcCCceEEEEccCCccEEEecCC
Confidence 999999999987 69999999975
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=9.7e-32 Score=256.73 Aligned_cols=244 Identities=11% Similarity=0.153 Sum_probs=190.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc---------eEEeecCCCC------------EEEEEEeccCC
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE---------TFRRDLKSGG------------FRIVEMLFRCN 98 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~---------~~~~~~~~~~------------~~~~~~~~~~~ 98 (411)
..|.+.|++++|+|+|++||+|+ ||.|+||++.+... .....+..|. ..+.++.|+++
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 45788999999999999999999 99999999986542 1223344666 66889999998
Q ss_pred e--EEEEecCCCCCCCCCeEEEEECCCCcEE---------------------------------------EEE--eecCc
Q 015198 99 I--LALVGAGDNSQYPPTKVIIWDDHQSRCI---------------------------------------GEF--AFRSD 135 (411)
Q Consensus 99 ~--~~l~s~~~d~~~~d~~i~vwd~~~~~~~---------------------------------------~~~--~~~~~ 135 (411)
+ ..+++++.| +.|++||+.+++.. ..+ .|...
T Consensus 105 ~~~~~l~s~s~d-----~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 105 KNAAQFLLSTND-----KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp CSSSEEEEEECS-----SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred CCcceEEEeCCC-----CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 7 677777777 99999998764432 122 27889
Q ss_pred eeEEEEcCCeEEEE--EcCeEEEEEcCC-ceeeEEE-------eccCCCcceEEEccCCCc-eEEEEecCCCCeEEEEEc
Q 015198 136 VRSVKLSRDRIVVV--LEHKIYVYSFVD-LKLLHQI-------ETLANLRGLCCLSHHSST-SVLACPGLQRGQVRIEHF 204 (411)
Q Consensus 136 i~~~~~~~~~~~~~--~dg~i~iwd~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~-~~l~~~g~~dg~i~i~~~ 204 (411)
|.+++|+|++.+++ .|+.|++||+++ ++.+..+ ..|.. .+.++.+++++ .+|++ |+.||.|++|+.
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~s-~~~dg~i~iwd~ 256 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTE--VITAAEFHPNSCNTFVY-SSSKGTIRLCDM 256 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCC--CEEEEEECSSCTTEEEE-EETTSCEEEEET
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCc--ceEEEEECCCCCcEEEE-EeCCCeEEEEEC
Confidence 99999999998888 799999999984 4444432 24444 45566666666 56665 668999999997
Q ss_pred CCcc-----eEEEecccc------------ceeEEEecCCCCEEEEEcCCCeEEEEEECCC-CceEEEEeCCCCCcc---
Q 015198 205 GLNM-----IKLINAHDS------------HIACFTLTLDGLLLATASTRGTLIRIFNTVD-GTRLQEVRRGVDRAE--- 263 (411)
Q Consensus 205 ~~~~-----~~~~~~~~~------------~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~-~~~~~~~~~~~~~~~--- 263 (411)
.... +..+..|.. .|.+++|+|+|++|++++. +. |++||+++ ++.+..+.. |...
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~--~~~~~~~ 332 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQV--HEYLRSK 332 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEES--CGGGTTT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeec--ccccccc
Confidence 6544 577888876 8999999999999999998 98 99999997 888888887 4321
Q ss_pred ------------eEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 264 ------------IYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 264 ------------v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+..++|+|++++|++++.||.|+|||+.+++..
T Consensus 333 l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 333 LCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp HHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 334999999999999999999999999998753
No 65
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.3e-32 Score=252.22 Aligned_cols=248 Identities=12% Similarity=0.176 Sum_probs=201.0
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCc-----ceEEeecCCCCEEEEEEeccCC-eEEEEecCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFK-----ETFRRDLKSGGFRIVEMLFRCN-ILALVGAGDNSQ 110 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~ 110 (411)
.....|...|.+++|+|+|++|++|+ |+.++||++.... ......+.+|...+..+.|.++ ...+++++.|
T Consensus 102 ~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D-- 179 (380)
T 3iz6_a 102 HAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD-- 179 (380)
T ss_dssp EEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT--
T ss_pred eEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC--
Confidence 34567999999999999999999999 9999999986422 1112234577777888888885 4567888887
Q ss_pred CCCCeEEEEECCCCcEEEEEe------ecCceeEEEEcC-CeEEEE---EcCeEEEEEcC-CceeeEEEeccCCCcceEE
Q 015198 111 YPPTKVIIWDDHQSRCIGEFA------FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFV-DLKLLHQIETLANLRGLCC 179 (411)
Q Consensus 111 ~~d~~i~vwd~~~~~~~~~~~------~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~ 179 (411)
++|++||+.+++.+..+. |...|.++.+++ ++.+++ .|+.|++||++ .++.+..+.+|...+..++
T Consensus 180 ---~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~ 256 (380)
T 3iz6_a 180 ---QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVK 256 (380)
T ss_dssp ---SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEE
T ss_pred ---CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEE
Confidence 999999999999988872 678899999987 666666 69999999997 4577888888888666555
Q ss_pred EccCCCceEEEEecCCCCeEEEEEcCC-cceEEEeccc-------cceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce
Q 015198 180 LSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHD-------SHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR 251 (411)
Q Consensus 180 ~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~-------~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~ 251 (411)
++ |++.+|++ |+.||.|++|+... ..+..+..+. ..|.+++|+|+|++|++|+.||. |++||+.+++.
T Consensus 257 ~~--p~~~~l~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~ 332 (380)
T 3iz6_a 257 FF--PDGQRFGT-GSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEM 332 (380)
T ss_dssp EC--TTSSEEEE-ECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCE
T ss_pred Ee--cCCCeEEE-EcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCce
Confidence 55 45667765 77999999999765 4445554432 24899999999999999999999 99999999998
Q ss_pred EEEEeC--CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 252 LQEVRR--GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 252 ~~~~~~--~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
+..+.. ..|.+.|.+++|+|||++|++|+.|++|+||++...+
T Consensus 333 ~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 333 VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 887732 2278899999999999999999999999999998764
No 66
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.1e-30 Score=257.35 Aligned_cols=285 Identities=11% Similarity=0.113 Sum_probs=220.6
Q ss_pred cccCCCCCCeEEEEEcCCCC-EEEEEe-CCcEEEEecCCCcceEEeecCCCCE---EEEEEeccCC-eEEEEecCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYG-CFAAGT-SCGFRIYNCEPFKETFRRDLKSGGF---RIVEMLFRCN-ILALVGAGDNSQY 111 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~-~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~l~s~~~d~~~ 111 (411)
....+|...|.+++|+|+++ +|++++ |+.|++||+.+.+.... +..+.. .+.++.|+++ +..+++++.|
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 228 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSD--- 228 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETT---
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeee--ecccCCCCceEEEEEECCCCCCEEEEEeCC---
Confidence 44678999999999999998 788888 99999999987554433 446666 8999999999 9999988887
Q ss_pred CCCeEEEEECCCCcEEEEE-----eecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccC-----------
Q 015198 112 PPTKVIIWDDHQSRCIGEF-----AFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLA----------- 172 (411)
Q Consensus 112 ~d~~i~vwd~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~----------- 172 (411)
+.|++||+.+++.+..+ .|...|.+++|+ ++.+++ .|+.|++||+++++.+..+..+.
T Consensus 229 --g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 229 --RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp --CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred --CeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 99999999999999998 688999999999 887776 58999999998877766654431
Q ss_pred ----------------------------------CCcc-------------------------------eEEEccCCC--
Q 015198 173 ----------------------------------NLRG-------------------------------LCCLSHHSS-- 185 (411)
Q Consensus 173 ----------------------------------~~~~-------------------------------~~~~~~~~~-- 185 (411)
..+. +.++.+.+.
T Consensus 306 ~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~ 385 (615)
T 1pgu_A 306 ATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQE 385 (615)
T ss_dssp EEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTC
T ss_pred eCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcE
Confidence 1000 011111100
Q ss_pred ----------------------------------------------------------------------ceEEEEecCC
Q 015198 186 ----------------------------------------------------------------------TSVLACPGLQ 195 (411)
Q Consensus 186 ----------------------------------------------------------------------~~~l~~~g~~ 195 (411)
+.++++ ++.
T Consensus 386 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 464 (615)
T 1pgu_A 386 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAV-GLE 464 (615)
T ss_dssp CEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEE-EET
T ss_pred EEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEE-eec
Confidence 122222 223
Q ss_pred -CCeEEEEEcCCcce--EEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCC-
Q 015198 196 -RGQVRIEHFGLNMI--KLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP- 271 (411)
Q Consensus 196 -dg~i~i~~~~~~~~--~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp- 271 (411)
|+.|++|+...... ..+..|...|.+++|+|++++|++++.|+. |++||+.+++.+..+... |...|++++|+|
T Consensus 465 ~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~iw~~~~~~~~~~~~~~-h~~~v~~~~~sp~ 542 (615)
T 1pgu_A 465 EGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK-ILLYDLQSREVKTSRWAF-RTSKINAISWKPA 542 (615)
T ss_dssp TTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEECCSCC-CSSCEEEEEECCC
T ss_pred CCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe-EEEeeCCCCcceeEeecC-CCCceeEEEEcCc
Confidence 56666666555443 455678899999999999999999999999 999999999988776543 678999999999
Q ss_pred ---------CCCEEEEEeCCCcEEEEEccccc-cCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccc
Q 015198 272 ---------NVQWLAVASDKGTVHIFSLRVRV-VGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGV 341 (411)
Q Consensus 272 ---------dg~~l~s~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (411)
++++|++++.||.|++||++++. ...
T Consensus 543 ~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------------------------------------- 578 (615)
T 1pgu_A 543 EKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK-------------------------------------------- 578 (615)
T ss_dssp C------CCSCCEEEEEETTSCEEEEESSCTTCCEE--------------------------------------------
T ss_pred cccccccccCCCEEEEEcCCCcEEEEECCCCceech--------------------------------------------
Confidence 99999999999999999998873 221
Q ss_pred cCcccccccceEEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 342 LPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+...+..++|++++.|++++.||.|++|+++.
T Consensus 579 ------------~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 579 ------------ALNAHKDGVNNLLWETPSTLVSSGADACIKRWNVVL 614 (615)
T ss_dssp ------------ETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEEC-
T ss_pred ------------hhhcCccceEEEEEcCCCCeEEecCCceEEEEeeec
Confidence 111122466778999996699999999999999875
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.4e-31 Score=246.44 Aligned_cols=245 Identities=12% Similarity=0.025 Sum_probs=197.8
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc-eEEeecCCCCEEEEEEeccCCeE-EEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE-TFRRDLKSGGFRIVEMLFRCNIL-ALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~~~d~~ 115 (411)
...+|.+.|++++|+|++++|++++ |+.|+||++.+... .....+..+...+.++.|++++. .+++++.| +.
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~ 80 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-----GE 80 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT-----SC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC-----Ce
Confidence 3558999999999999999999999 99999999987551 11111226777899999999988 88888887 99
Q ss_pred EEEEEC-CCCcEEEEEe--ecCceeEEEEcCCeEEEE---EcCeEEEEEcCC---------ceeeEEEeccCCCcceEEE
Q 015198 116 VIIWDD-HQSRCIGEFA--FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVD---------LKLLHQIETLANLRGLCCL 180 (411)
Q Consensus 116 i~vwd~-~~~~~~~~~~--~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~ 180 (411)
|++||+ .+++...... |...|.+++|+| +..++ .|+.|++||+++ ++.+..+. +.. .+.++
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~--~v~~~ 156 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKN--KIFTM 156 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCC--CEEEE
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCC--ceEEE
Confidence 999999 8887755555 889999999999 55555 699999999987 66665554 444 45566
Q ss_pred ccCCCceEEEEecCCCCeEEEEEcCC-c---ceEEEeccccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCC------
Q 015198 181 SHHSSTSVLACPGLQRGQVRIEHFGL-N---MIKLINAHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDG------ 249 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~dg~i~i~~~~~-~---~~~~~~~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~------ 249 (411)
.+++++ +++ ++.++.|++|+... . .......|...+.+++|+| ++++|++++.||. |++|+++..
T Consensus 157 ~~~~~~--l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 157 DTNSSR--LIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYNS 232 (342)
T ss_dssp EECSSE--EEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTTC
T ss_pred EecCCc--EEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCccccc
Confidence 666765 443 56899999999876 2 2234457888999999999 9999999999999 999999887
Q ss_pred ceEEEEeCCC-------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 250 TRLQEVRRGV-------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 250 ~~~~~~~~~~-------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+.+..+..+. |...|.+++|+|++++|++++.||.|++||+.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 7777887731 1338999999999999999999999999999988754
No 68
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.7e-30 Score=245.21 Aligned_cols=275 Identities=15% Similarity=0.139 Sum_probs=224.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
.++.|+|+++ ++||+|.|++|+|||..+++......++.+...|.++.|++++.++++|+.| +.|++||+.+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCc
Confidence 4577999976 5899988999999999987766656666788889999999999999999988 999999999999
Q ss_pred EEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCc-eeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEE
Q 015198 126 CIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDL-KLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIE 202 (411)
Q Consensus 126 ~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~ 202 (411)
.+..+. |...+.++.+++.-.... .|+.+++||.... ..+..+..|.. .+..+.+.+++.++++ ++.|+.+++|
T Consensus 181 ~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--~~~~~~~~~~g~~l~s-~~~D~~v~i~ 257 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--EVCGLRWAPDGRHLAS-GGNDNLVNVW 257 (420)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS--CEEEEEECTTSSEEEE-EETTSCEEEE
T ss_pred EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccccc--ceeeeeecCCCCeeee-eeccccceEE
Confidence 999988 899999999987644444 7999999998764 55567777776 4455566666777776 5689999998
Q ss_pred EcCCc-----ceEEEeccccceeEEEecCCCC-EEEE--EcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC
Q 015198 203 HFGLN-----MIKLINAHDSHIACFTLTLDGL-LLAT--ASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ 274 (411)
Q Consensus 203 ~~~~~-----~~~~~~~~~~~i~~l~~sp~g~-~l~s--~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 274 (411)
+.... .+.....|...|.+++|+|++. ++++ |+.|+. |++||+.+++++..+.. ...+.++.|+++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~~~~ 333 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSPHYK 333 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEETTTT
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecCCCC
Confidence 87542 3566788999999999999765 5554 467999 99999999999988875 45789999999999
Q ss_pred EEEEEe--CCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 275 WLAVAS--DKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 275 ~l~s~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
.|++++ .|+.|+|||+.++++..
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~------------------------------------------------------- 358 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVA------------------------------------------------------- 358 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEE-------------------------------------------------------
T ss_pred eEEEEEecCCCEEEEEECCCCcEEE-------------------------------------------------------
Confidence 988765 78999999999887543
Q ss_pred EEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 353 AQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+++-+.+.+..++|+++ ..|++++.||.|++|++.+
T Consensus 359 -~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 359 -ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp -EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 23333456778899998 6788889999999999865
No 69
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=260.11 Aligned_cols=280 Identities=14% Similarity=0.163 Sum_probs=220.1
Q ss_pred CCCCeEEEEEcCCCC-EEEEE----------e-CCcEEEEecCCCcce-EEeecCCCCEEEEEEeccCCeEEEEecCCCC
Q 015198 43 DEIELISVSWNQDYG-CFAAG----------T-SCGFRIYNCEPFKET-FRRDLKSGGFRIVEMLFRCNILALVGAGDNS 109 (411)
Q Consensus 43 h~~~V~~l~~s~~g~-~la~g----------~-dg~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 109 (411)
+...|.+++|+|+++ +|++| + |+.|+||++.+.... ....+ .+...+.++.|++++.++++++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~d- 88 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALDN- 88 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEESS-
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEccC-
Confidence 345789999999987 99999 7 899999999875432 11222 567789999999999999998887
Q ss_pred CCCCCeEEEEECCC----CcEEEEEe-ecCceeEEEEcCC-eEEEE---EcCeEEEEEcCCce------eeEEE---ecc
Q 015198 110 QYPPTKVIIWDDHQ----SRCIGEFA-FRSDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLK------LLHQI---ETL 171 (411)
Q Consensus 110 ~~~d~~i~vwd~~~----~~~~~~~~-~~~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~------~~~~~---~~~ 171 (411)
+.|++||+.+ .+.+..+. |...|.+++|+|+ +.+++ .|+.|++||+.+++ ....+ ..|
T Consensus 89 ----g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 89 ----GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp ----SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred ----CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 9999999887 35666666 8999999999998 66665 68999999998876 33222 445
Q ss_pred CCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEecc------ccceeEEEecCCC-CEEEEEcCCC---eE
Q 015198 172 ANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAH------DSHIACFTLTLDG-LLLATASTRG---TL 240 (411)
Q Consensus 172 ~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~------~~~i~~l~~sp~g-~~l~s~s~dg---~~ 240 (411)
...+..++++++. +.++++ ++.||.|++|+... +.+..+..+ ...|.+++|+|++ .+|++++.|+ .
T Consensus 165 ~~~v~~~~~~~~~-~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~- 241 (416)
T 2pm9_A 165 VDEVISLAWNQSL-AHVFAS-AGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS- 241 (416)
T ss_dssp SCCCCEEEECSSC-TTEEEE-ESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC-
T ss_pred CCCeeEEEeCCCC-CcEEEE-EcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce-
Confidence 5545555554432 345554 67899999999765 455666665 7899999999997 6899999998 9
Q ss_pred EEEEECCCC-ceEEEEe-CCCCCcceEEEEeCC-CCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCC
Q 015198 241 IRIFNTVDG-TRLQEVR-RGVDRAEIYSIALSP-NVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSS 317 (411)
Q Consensus 241 I~vwd~~~~-~~~~~~~-~~~~~~~v~~l~~sp-dg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (411)
|++||++++ +.+..+. . |...|.+++|+| ++++|++++.||.|++||+++++...
T Consensus 242 i~~~d~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~-------------------- 299 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQG--HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS-------------------- 299 (416)
T ss_dssp CCEEETTSTTSCSBCCCSC--CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE--------------------
T ss_pred EEEEeCCCCCCCcEEeecC--ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce--------------------
Confidence 999999987 5565665 5 788999999999 99999999999999999999876432
Q ss_pred CCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC--CEEEEEEeCCcEEEEEEec
Q 015198 318 SFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ--NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+...+..++|+++ ..|++++.||.|++|++..
T Consensus 300 ------------------------------------~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 300 ------------------------------------QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp ------------------------------------EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred ------------------------------------eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 33334445667889997 4778888899999999875
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.9e-30 Score=275.71 Aligned_cols=319 Identities=12% Similarity=0.149 Sum_probs=240.4
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|.+.|++++|+|+|++|++|+ ||.|+|||+.+.+.... +..|...+.++.|++++.++++++.| +.|+
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~ 682 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSAD-----KKVK 682 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEE
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CeEE
Confidence 4678999999999999999999999 99999999998665544 44788899999999999999999888 9999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
+||+.+++.+..+. |...|.+++|+|+ +.+++ .|+.|++||+.+++.+..+..|...+..++ +++++.++++
T Consensus 683 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~--~sp~~~~l~s 760 (1249)
T 3sfz_A 683 IWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCR--FSPDDELLAS 760 (1249)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEE--ECSSTTEEEE
T ss_pred EEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEE--EecCCCEEEE
Confidence 99999999999988 8999999999994 44555 689999999999999999988887555544 4556667765
Q ss_pred ecCCCCeEEEEEcCCcc-e------------------------------------------------------EEE-ecc
Q 015198 192 PGLQRGQVRIEHFGLNM-I------------------------------------------------------KLI-NAH 215 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~-~------------------------------------------------------~~~-~~~ 215 (411)
++.||.|++|+..... . ..+ .+|
T Consensus 761 -~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~ 839 (1249)
T 3sfz_A 761 -CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGH 839 (1249)
T ss_dssp -EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSS
T ss_pred -EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCC
Confidence 6689999999865321 1 111 267
Q ss_pred ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 216 DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 216 ~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
...|.+++|+|+++++++++.|+. |++||+.++..+..+.+ |...|.+++|+|+|++|++++.||.|++|++.+...
T Consensus 840 ~~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~ 916 (1249)
T 3sfz_A 840 HSTIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCK 916 (1249)
T ss_dssp SSCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHS
T ss_pred CCceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEEeCCCeEEEEEccccce
Confidence 889999999999999999999999 99999999999988887 888999999999999999999999999999987654
Q ss_pred CCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEE
Q 015198 296 GEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVV 374 (411)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 374 (411)
......... .+ ............. ....... .+. .........+......++|+++ +.++
T Consensus 917 ~~~~~~~~~-----~~-~~~~~~~~~~~~~----~~~~~~~--------~~~-~~~~~~~~~~~~~i~~~~~sp~g~~l~ 977 (1249)
T 3sfz_A 917 NSAIVLKQE-----ID-VVFQENETMVLAV----DNIRGLQ--------LIA-GKTGQIDYLPEAQVSCCCLSPHLEYVA 977 (1249)
T ss_dssp CCSSSEEEE-----EE-EEEETTEEEEEEE----ESSSSEE--------EEE-ESSCCEEEECCSCEEEEEECTTSSEEE
T ss_pred eeeecccce-----ee-EEEcCCCcEEEEe----cCCcceE--------EEe-cCcceEEEcccCcEEEEEEcCCCCEEE
Confidence 321111100 00 0000000000000 0000000 000 0000112233456778899998 7788
Q ss_pred EEEeCCcEEEEEEec
Q 015198 375 IVSMDGSFYRCSFDP 389 (411)
Q Consensus 375 ~~~~dg~~~~~~~~~ 389 (411)
+++.||.+++|.+..
T Consensus 978 ~g~~~g~i~i~d~~~ 992 (1249)
T 3sfz_A 978 FGDEDGAIKIIELPN 992 (1249)
T ss_dssp EEETTSCCEEEETTT
T ss_pred EEcCCCCEEEEEcCC
Confidence 888899999998875
No 71
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=7.5e-31 Score=260.57 Aligned_cols=279 Identities=11% Similarity=0.126 Sum_probs=227.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCC----cceEEeecCCCCEE-EEEEeccC--CeEEEEecCCCCCCC
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPF----KETFRRDLKSGGFR-IVEMLFRC--NILALVGAGDNSQYP 112 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~----~~~~~~~~~~~~~~-~~~~~~~~--~~~~l~s~~~d~~~~ 112 (411)
...|.+.|.+++|+|++++|++++++.|+||++++. +.... +..|... +.++.|+| ++.++++++.|
T Consensus 14 ~~~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~--~~~h~~~~v~~~~~sp~~~~~~l~s~~~d---- 87 (615)
T 1pgu_A 14 PSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQ--FTGHGSSVVTTVKFSPIKGSQYLCSGDES---- 87 (615)
T ss_dssp CCCCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEE--ECTTTTSCEEEEEECSSTTCCEEEEEETT----
T ss_pred CCCccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceE--EecCCCceEEEEEECcCCCCCEEEEecCC----
Confidence 346889999999999999999999999999999875 44333 4478888 99999999 99999999988
Q ss_pred CCeEEEEECCCC--------cEEEEEe-ecCceeEEEEcCCeEEEE---Ec----CeEEEEEcCCceeeEEEeccCCCcc
Q 015198 113 PTKVIIWDDHQS--------RCIGEFA-FRSDVRSVKLSRDRIVVV---LE----HKIYVYSFVDLKLLHQIETLANLRG 176 (411)
Q Consensus 113 d~~i~vwd~~~~--------~~~~~~~-~~~~i~~~~~~~~~~~~~---~d----g~i~iwd~~~~~~~~~~~~~~~~~~ 176 (411)
+.|++||+.++ +.+..+. |...|.+++|+|++.+++ .+ +.|++|| .++.+..+..|...+.
T Consensus 88 -g~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~ 164 (615)
T 1pgu_A 88 -GKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRIN 164 (615)
T ss_dssp -SEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEE
T ss_pred -CEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEE
Confidence 99999998754 5666666 889999999999998887 23 5788888 5677788888777544
Q ss_pred eEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEecccc---ceeEEEecCC-CCEEEEEcCCCeEEEEEECCCCce
Q 015198 177 LCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHDS---HIACFTLTLD-GLLLATASTRGTLIRIFNTVDGTR 251 (411)
Q Consensus 177 ~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~---~i~~l~~sp~-g~~l~s~s~dg~~I~vwd~~~~~~ 251 (411)
++.+++++..++++++.|+.|++|+... +.+..+..|.. .|.+++|+|+ +++|++++.|+. |++||+.+++.
T Consensus 165 --~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 241 (615)
T 1pgu_A 165 --ACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEF 241 (615)
T ss_dssp --EEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCE
T ss_pred --EEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCE
Confidence 4555555553333467899999998654 56677888999 9999999999 999999999999 99999999999
Q ss_pred EEEE-e---CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCC
Q 015198 252 LQEV-R---RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPST 327 (411)
Q Consensus 252 ~~~~-~---~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (411)
+..+ . . |...|.+++|+ ++++|++++.|+.|++||+++++...
T Consensus 242 ~~~~~~~~~~--~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~------------------------------ 288 (615)
T 1pgu_A 242 LKYIEDDQEP--VQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQ------------------------------ 288 (615)
T ss_dssp EEECCBTTBC--CCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEE------------------------------
T ss_pred eEEecccccc--cCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEE------------------------------
Confidence 9888 4 4 88899999999 99999999999999999999876542
Q ss_pred CCCCCCcccccccccCcccccccceEEEEeC----CCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 328 GANPGSSLSFMRGVLPKYFSSEWSFAQFHIP----EVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+ ......+.|...+.+++++.||.+++|.+..
T Consensus 289 --------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 289 --------------------------KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGH 328 (615)
T ss_dssp --------------------------EEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTE
T ss_pred --------------------------EEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCC
Confidence 22222 1234556676568899999999999998764
No 72
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.6e-30 Score=243.64 Aligned_cols=247 Identities=12% Similarity=0.141 Sum_probs=200.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
..+|...|++|+|+|+|++|++|+ |+.|+|||+++.+.+.. +..|...+.++.+++. .+++++.| +.+++
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~--~~~h~~~v~~~s~~~~--~l~sgs~d-----~~i~~ 213 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRN--MTSHSARVGSLSWNSY--ILSSGSRS-----GHIHH 213 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEETT--EEEEEETT-----SEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEE--EeCCCCceEEEeeCCC--EEEEEeCC-----CceeE
Confidence 357888999999999999999999 99999999998665444 3477778888877654 67777777 99999
Q ss_pred EECCCC-cEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCce----eeEEEeccCCCcceEEEccCCCceEE
Q 015198 119 WDDHQS-RCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLK----LLHQIETLANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 119 wd~~~~-~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l 189 (411)
||.... ..+..+. |...+..+.+++++.+++ .|+.|++|+..+++ .+.....+...+..+++.+.....+.
T Consensus 214 ~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la 293 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLA 293 (420)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEE
T ss_pred eeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEE
Confidence 998764 4455666 899999999999998888 69999999997764 34556667766666666666554444
Q ss_pred EEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEc--CCCeEEEEEECCCCceEEEEeCCCCCcceEEE
Q 015198 190 ACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAS--TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSI 267 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s--~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l 267 (411)
..+|+.|+.|++|+...........+...+.++.|+|+++.|++++ .|+. |+|||+.+++++.++.+ |.+.|+++
T Consensus 294 ~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~g--H~~~V~~l 370 (420)
T 4gga_A 294 TGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELKG--HTSRVLSL 370 (420)
T ss_dssp EEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEECC--CSSCEEEE
T ss_pred EEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEcC--CCCCEEEE
Confidence 4457789999999987655444445567788999999999888764 7899 99999999999999998 88999999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEccccccCCC
Q 015198 268 ALSPNVQWLAVASDKGTVHIFSLRVRVVGED 298 (411)
Q Consensus 268 ~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~ 298 (411)
+|+|||++|++|+.|++|+|||+....+.+.
T Consensus 371 ~~spdg~~l~S~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 371 TMSPDGATVASAAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EECTTSSCEEEEETTTEEEEECCSCSSCC--
T ss_pred EEcCCCCEEEEEecCCeEEEEECCCCCccch
Confidence 9999999999999999999999987765543
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.9e-30 Score=244.67 Aligned_cols=245 Identities=12% Similarity=0.118 Sum_probs=196.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
.|...|.+++|+|++++|++|+ ||.|++||+.+.+.... +..+...+.++.|+++ .+++++.| +.|++||
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~--~l~~~~~d-----g~i~i~d 202 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT--MAGHQARVGCLSWNRH--VLSSGSRS-----GAIHHHD 202 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEEETT--EEEEEETT-----SEEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE--ecCCCCceEEEEECCC--EEEEEcCC-----CCEEEEe
Confidence 4889999999999999999999 99999999987665444 3477788888888654 66677776 9999999
Q ss_pred CC-CCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe-cC
Q 015198 121 DH-QSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP-GL 194 (411)
Q Consensus 121 ~~-~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~ 194 (411)
+. .+..+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+..|...+..++++++... +++++ |+
T Consensus 203 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~-ll~~~~gs 281 (401)
T 4aez_A 203 VRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSN-LLATGGGT 281 (401)
T ss_dssp TTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTT-EEEEECCT
T ss_pred cccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCC-EEEEecCC
Confidence 98 456666776 899999999999998887 6899999999999999888888886666666665443 33332 34
Q ss_pred CCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEE--EcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 195 QRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLAT--ASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 195 ~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s--~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
.|+.|++|+...........+...|.+++|+|++++|++ |+.||. |++||+.+++.........|...|.+++|+|+
T Consensus 282 ~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~d 360 (401)
T 4aez_A 282 MDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPD 360 (401)
T ss_dssp TTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECTT
T ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECCC
Confidence 899999999765444333357788999999999999998 558999 99999998766555332228889999999999
Q ss_pred CCEEEEEeCCCcEEEEEccccccCC
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
+++|++++.||.|++|++.+++...
T Consensus 361 g~~l~s~~~dg~i~iw~~~~~~~~~ 385 (401)
T 4aez_A 361 GRILSTAASDENLKFWRVYDGDHVK 385 (401)
T ss_dssp SSEEEEECTTSEEEEEECCC-----
T ss_pred CCEEEEEeCCCcEEEEECCCCcccc
Confidence 9999999999999999999988654
No 74
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.1e-30 Score=243.45 Aligned_cols=279 Identities=11% Similarity=0.214 Sum_probs=217.7
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
..+|...|.+++| ++++|++|+ ||.|++||+.+.+.... +..|...+.++.| ++..+++++.| |.|++
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~--~~~~l~sg~~d-----g~i~v 197 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRI--LTGHTGSVLCLQY--DERVIITGSSD-----STVRV 197 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEE--ECCCSSCEEEEEC--CSSEEEEEETT-----SCEEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEE--EcCCCCcEEEEEE--CCCEEEEEcCC-----CeEEE
Confidence 4567788999887 789999999 99999999987665444 4477888888888 55577777777 99999
Q ss_pred EECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceee---EEEeccCCCcceEEEccCCCceEEEEec
Q 015198 119 WDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLL---HQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 119 wd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
||+.+++.+..+. |...|.+++|+++....+ .|+.|++||+.+++.. ..+..|...+. ++.++ +.++++ |
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~--~~~~~--~~~l~s-~ 272 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFD--DKYIVS-A 272 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEE--EEEEE--TTEEEE-E
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEE--EEEeC--CCEEEE-E
Confidence 9999999999988 899999999987643333 7999999999887655 55566666444 44443 346655 6
Q ss_pred CCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 194 LQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 194 ~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
+.||.|++|+.. ++.+..+.+|...|.++++ ++++|++|+.||. |++||+++++.+..+.. |...|.+++| +
T Consensus 273 ~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~--~ 345 (435)
T 1p22_A 273 SGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF--D 345 (435)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC--C
T ss_pred eCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe--c
Confidence 689999999865 4677888999999999998 5689999999999 99999999999999988 8889999999 7
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
+.+|++|+.||.|++||+.+++........ ...
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~-----------------------------------------------~~~ 378 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGT-----------------------------------------------LCL 378 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTT-----------------------------------------------TEE
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccc-----------------------------------------------hhe
Confidence 899999999999999999988643200000 011
Q ss_pred EEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 353 AQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
..+..+.+.+..++| ....|++++.||.|++|++..
T Consensus 379 ~~~~~h~~~v~~l~~-~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 379 RTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEECCCSSCCCCEEE-CSSCEEECCSSSEEEEEC---
T ss_pred eeccCCCCCeEEEEe-CCCEEEEEeCCCEEEEEECCC
Confidence 223333345556677 347799999999999999986
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=3e-31 Score=246.09 Aligned_cols=238 Identities=13% Similarity=0.168 Sum_probs=198.2
Q ss_pred CCCCCeEEEEEcCC----CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCe
Q 015198 42 VDEIELISVSWNQD----YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTK 115 (411)
Q Consensus 42 ~h~~~V~~l~~s~~----g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~ 115 (411)
.|...|++++|+|+ +++|++|+ ||.|++||+.+.+.... +..+...+.++.|++ ++..+++++.| +.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~d-----g~ 139 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKD-----HA 139 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETT-----SC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCC-----Ce
Confidence 47789999999999 67899999 99999999997665444 447888899999999 88888998887 99
Q ss_pred EEEEECCCCcEEEEE---e-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEec------------------
Q 015198 116 VIIWDDHQSRCIGEF---A-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIET------------------ 170 (411)
Q Consensus 116 i~vwd~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~------------------ 170 (411)
|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999999988 3 899999999999998777 689999999988765543332
Q ss_pred ----------cCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC---------------cceEEEeccccceeEEEec
Q 015198 171 ----------LANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL---------------NMIKLINAHDSHIACFTLT 225 (411)
Q Consensus 171 ----------~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~---------------~~~~~~~~~~~~i~~l~~s 225 (411)
|...+..+++. +.++++ ++.|+.|++|+... ..+..+..|...|.+++|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~----~~~l~~-~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 294 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL----GDLILS-KSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFS 294 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE----TTEEEE-ECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCE
T ss_pred ccCccccccCCcceEEEEEEc----CCEEEE-EecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEc
Confidence 66655555555 335554 66899999998764 2366778899999999999
Q ss_pred CC--CCEEEEEcCCCeEEEEEECCCCc----eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 226 LD--GLLLATASTRGTLIRIFNTVDGT----RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 226 p~--g~~l~s~s~dg~~I~vwd~~~~~----~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
|+ +++|++++.||. |++||+.+++ ....+..+.+...|.+++|+|++++|++++.||.|++||+.+
T Consensus 295 ~~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 295 MDFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp ECTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 99 999999999999 9999999875 444677644478999999999999999999999999999864
No 76
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.98 E-value=3.3e-30 Score=233.05 Aligned_cols=248 Identities=12% Similarity=0.109 Sum_probs=193.9
Q ss_pred cCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC--CcEEEEEe-ecCceeEEEEcCC--eEEEE---EcCeE
Q 015198 83 LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ--SRCIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKI 154 (411)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~--~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i 154 (411)
+.+|...+.++.|++++..+++++.| ++|++||+.. .+.+..+. |...|.+++|+++ +.+++ .|++|
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 34788889999999999999999988 9999999864 36677777 9999999999863 66665 69999
Q ss_pred EEEEcCCce--eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc---ceEEEeccccceeEEEecCC--
Q 015198 155 YVYSFVDLK--LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN---MIKLINAHDSHIACFTLTLD-- 227 (411)
Q Consensus 155 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~l~~sp~-- 227 (411)
++||+++++ .+..+..|...+..++++++..+.+|++ |+.|+.|++|+.... ....+.+|...|.+++|+|+
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s-~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-EECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 999998774 5566677777666666665533667765 668999999987653 24567899999999999997
Q ss_pred -----------CCEEEEEcCCCeEEEEEECCCCc----eEEEEeCCCCCcceEEEEeCCCC---CEEEEEeCCCcEEEEE
Q 015198 228 -----------GLLLATASTRGTLIRIFNTVDGT----RLQEVRRGVDRAEIYSIALSPNV---QWLAVASDKGTVHIFS 289 (411)
Q Consensus 228 -----------g~~l~s~s~dg~~I~vwd~~~~~----~~~~~~~~~~~~~v~~l~~spdg---~~l~s~s~dg~I~vwd 289 (411)
+++|++|+.|+. |++||+++++ ....+.+ |...|.+++|+|++ ++|++++.|++|+|||
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~~--H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp -----------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEecC--CCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 579999999999 9999998876 5566776 88899999999985 8999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEcc
Q 015198 290 LRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS 369 (411)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (411)
++++..... .. .+. .......+..++|++
T Consensus 236 ~~~~~~~~~---------------------------------~~-------~~~-----------~~~~~~~v~~~~~s~ 264 (297)
T 2pm7_B 236 QDNEQGPWK---------------------------------KT-------LLK-----------EEKFPDVLWRASWSL 264 (297)
T ss_dssp ESSTTSCCE---------------------------------EE-------ESS-----------SSCCSSCEEEEEECS
T ss_pred eCCCCCccc---------------------------------ee-------eee-----------cccCCCcEEEEEECC
Confidence 987532100 00 000 000123567789999
Q ss_pred C-CEEEEEEeCCcEEEEEEecC
Q 015198 370 Q-NTVVIVSMDGSFYRCSFDPV 390 (411)
Q Consensus 370 ~-~~~~~~~~dg~~~~~~~~~~ 390 (411)
+ +.|++++.||.|++|....+
T Consensus 265 ~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 265 SGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp SSCCEEEEETTSCEEEEEECTT
T ss_pred CCCEEEEEcCCCcEEEEEECCC
Confidence 8 67888889999999998763
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.98 E-value=1.1e-30 Score=245.54 Aligned_cols=244 Identities=16% Similarity=0.161 Sum_probs=202.4
Q ss_pred ccccCCCCCCeEEEEEcCC----C---CEEEEEe-CCcEEEEecCCCcc-----eEEeecCCC-----CEEEEEEecc--
Q 015198 37 TAFSDVDEIELISVSWNQD----Y---GCFAAGT-SCGFRIYNCEPFKE-----TFRRDLKSG-----GFRIVEMLFR-- 96 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~----g---~~la~g~-dg~i~iw~~~~~~~-----~~~~~~~~~-----~~~~~~~~~~-- 96 (411)
.....+|...|.+++|+|+ + ++|++++ |+.|++|++.+... ... +..+ ...+.++.|+
T Consensus 55 ~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 55 SYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK--LDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp EEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEE--ECCSCTTGGGSCEEEEEEECC
T ss_pred ceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccccccee--ecccccccCCCcEEEEEEeec
Confidence 3456689999999999999 9 9999999 99999999987554 333 3244 4788899999
Q ss_pred --CCeEE-EEecCCCCCCCCCeEEEEECCC------CcEEE-----EEe--------ecCceeEEEEcCCeEEEE---Ec
Q 015198 97 --CNILA-LVGAGDNSQYPPTKVIIWDDHQ------SRCIG-----EFA--------FRSDVRSVKLSRDRIVVV---LE 151 (411)
Q Consensus 97 --~~~~~-l~s~~~d~~~~d~~i~vwd~~~------~~~~~-----~~~--------~~~~i~~~~~~~~~~~~~---~d 151 (411)
+++.. +++++.| +.|++||+.+ ++.+. .+. |...|.+++|+|++ +++ .|
T Consensus 133 ~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d 206 (397)
T 1sq9_A 133 NDRLLSHRLVATDVK-----GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNN 206 (397)
T ss_dssp C----CEEEEEEETT-----SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTT
T ss_pred cCCCCceEEEEEeCC-----CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCC
Confidence 88888 8888887 9999999888 65554 553 68899999999999 666 68
Q ss_pred CeEEEEEcCCceeeEEEec---c---CCCcceEEEccCCCceEEEEecCCC---CeEEEEEcC-CcceEEEec-------
Q 015198 152 HKIYVYSFVDLKLLHQIET---L---ANLRGLCCLSHHSSTSVLACPGLQR---GQVRIEHFG-LNMIKLINA------- 214 (411)
Q Consensus 152 g~i~iwd~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~l~~~g~~d---g~i~i~~~~-~~~~~~~~~------- 214 (411)
+.|++||+++++.+..+.. | ... +.++.+++++.+|++ ++.| |.|++|+.. .+.+..+..
T Consensus 207 g~i~i~d~~~~~~~~~~~~~~~h~~~~~~--i~~i~~~~~~~~l~~-~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 207 GTVQISELSTLRPLYNFESQHSMINNSNS--IRSVKFSPQGSLLAI-AHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCC---CCCCC--EEEEEECSSTTEEEE-EEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred CcEEEEECCCCceeEEEeccccccccCCc--cceEEECCCCCEEEE-EecCCCCceEEEEECCCCcccceeccCcccccc
Confidence 9999999999999999987 6 664 455555666677776 5578 999999865 566777888
Q ss_pred ------cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEe------CCCC---------------CcceEEE
Q 015198 215 ------HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVR------RGVD---------------RAEIYSI 267 (411)
Q Consensus 215 ------~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~------~~~~---------------~~~v~~l 267 (411)
|...|.+++|+|++++|++++.|+. |++||+++++.+..+. . | ...|.++
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~v~~~ 360 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIE--IEEDILAVDEHGDSLAEPGVFDV 360 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCS--SGGGCCCBCTTSCBCSSCCEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCccc--chhhhhccccccccccCCceeEE
Confidence 9999999999999999999999999 9999999999999998 5 5 7899999
Q ss_pred EeCCCC----------CEEEEEeCCCcEEEEEccccc
Q 015198 268 ALSPNV----------QWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 268 ~~spdg----------~~l~s~s~dg~I~vwd~~~~~ 294 (411)
+|+|++ ++|++++.||.|++|++++++
T Consensus 361 ~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 361 KFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 999998 799999999999999998874
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.98 E-value=6.3e-29 Score=238.71 Aligned_cols=241 Identities=13% Similarity=0.145 Sum_probs=194.2
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEecc--CCeEEEEecCCCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFR--CNILALVGAGDNSQYPPT 114 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~~d~~~~d~ 114 (411)
....+|.+.|++++|+|++ +|++|+ ||.|++||+++.+.... +..|...+.++.+. +++..+++++.| +
T Consensus 156 ~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~~l~s~s~d-----~ 227 (464)
T 3v7d_B 156 LQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV--FEGHNSTVRCLDIVEYKNIKYIVTGSRD-----N 227 (464)
T ss_dssp EEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEEESSSCEEEEEEETT-----S
T ss_pred EEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE--ECCCCCccEEEEEecCCCCCEEEEEcCC-----C
Confidence 3456899999999999988 888888 99999999998655443 33566666666665 688889999888 9
Q ss_pred eEEEEECCCCcE-----------------------EEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEe
Q 015198 115 KVIIWDDHQSRC-----------------------IGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIE 169 (411)
Q Consensus 115 ~i~vwd~~~~~~-----------------------~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~ 169 (411)
.|++||+.+++. +..+. |...+.++..+.+....+ .|+.|++||+++++.+..+.
T Consensus 228 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 228 TLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp CEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 999999887753 33333 677787775554433333 69999999999999999998
Q ss_pred ccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCC
Q 015198 170 TLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVD 248 (411)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~ 248 (411)
.|...+..++ +++++..+++ |+.||.|++|+.. ++.+..+.+|...|.+++|+ +.+|++++.||. |++||+.+
T Consensus 308 ~~~~~v~~~~--~~~~~~~l~s-g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~ 381 (464)
T 3v7d_B 308 GHTDRIYSTI--YDHERKRCIS-ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDAND 381 (464)
T ss_dssp CCSSCEEEEE--EETTTTEEEE-EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTT
T ss_pred CCCCCEEEEE--EcCCCCEEEE-EeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCC
Confidence 8877555444 4555667765 6689999999974 67788889999999999997 579999999999 99999999
Q ss_pred CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 249 GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 249 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
++....+. +...+..++|++++++|++++ ||.|++||+++++..
T Consensus 382 ~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 382 YSRKFSYH---HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp CCEEEEEE---CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEE
T ss_pred Cceeeeec---CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEE
Confidence 88776665 555778889999999999998 899999999998765
No 79
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2.3e-30 Score=236.18 Aligned_cols=246 Identities=15% Similarity=0.153 Sum_probs=191.8
Q ss_pred cCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc--EEEEEe-ecCceeEEEEcCC--eEEEE---EcCeE
Q 015198 83 LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR--CIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKI 154 (411)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i 154 (411)
+.+|...+.++.|++++..|++++.| ++|++||+.+++ .+..+. |...|.+++|+++ +.+++ .|+.|
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 44788889999999999999999988 999999998875 355666 8999999999863 55555 69999
Q ss_pred EEEEcCCc--eeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcc----eEEEeccccceeEEEecCC-
Q 015198 155 YVYSFVDL--KLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNM----IKLINAHDSHIACFTLTLD- 227 (411)
Q Consensus 155 ~iwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~----~~~~~~~~~~i~~l~~sp~- 227 (411)
++||++++ +.+..+..|...+..++++++.++.+|++ |+.|+.|++|+..... ...+.+|...|.+++|+|+
T Consensus 84 ~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~las-gs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 84 IIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILAC-GSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEE-ECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEE-EcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 99999887 35666777888777777777655667765 7799999999887542 3445688999999999997
Q ss_pred ----------------CCEEEEEcCCCeEEEEEECCCC---ceEEEEeCCCCCcceEEEEeCCCC----CEEEEEeCCCc
Q 015198 228 ----------------GLLLATASTRGTLIRIFNTVDG---TRLQEVRRGVDRAEIYSIALSPNV----QWLAVASDKGT 284 (411)
Q Consensus 228 ----------------g~~l~s~s~dg~~I~vwd~~~~---~~~~~~~~~~~~~~v~~l~~spdg----~~l~s~s~dg~ 284 (411)
+++|++|+.|+. |++||++.+ +.+..+.+ |...|.+++|+|++ ++|++++.|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~~--h~~~V~~v~~sp~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLEA--HSDWVRDVAWAPSIGLPTSTIASCSQDGR 239 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCBC--CSSCEEEEECCCCSSCSCCEEEEEETTCE
T ss_pred CCccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeeccc--CCCceEEEEecCCCCCCCceEEEEcCCCe
Confidence 478999999999 999999765 34556666 88899999999987 88999999999
Q ss_pred EEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEE
Q 015198 285 VHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFI 364 (411)
Q Consensus 285 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (411)
|+||++++..... . ....+.-..+.+..
T Consensus 240 v~iw~~~~~~~~~----------------------------------~------------------~~~~~~~~~~~v~~ 267 (316)
T 3bg1_A 240 VFIWTCDDASSNT----------------------------------W------------------SPKLLHKFNDVVWH 267 (316)
T ss_dssp EEEEECSSTTCCC----------------------------------C------------------BCCEEEECSSCEEE
T ss_pred EEEEEccCccccc----------------------------------h------------------hhhhhhcCCCcEEE
Confidence 9999998743210 0 00011222356778
Q ss_pred EEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 365 AAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 365 ~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
++|+++ +.|++++.||.|++|....
T Consensus 268 v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 268 VSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 899998 6788889999999999876
No 80
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=9e-29 Score=236.47 Aligned_cols=275 Identities=13% Similarity=0.183 Sum_probs=219.7
Q ss_pred cccCCCCCCe-EEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 38 AFSDVDEIEL-ISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 38 ~~~~~h~~~V-~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
....+|.+.| .+ +.+++++|++|+ ||.|++||+.+.+.... +..|...+.++.++++ .+++++.| +.
T Consensus 112 ~~l~~h~~~v~~~--~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~--~l~s~~~d-----g~ 180 (445)
T 2ovr_B 112 KVLKGHDDHVITC--LQFCGNRIVSGSDDNTLKVWSAVTGKCLRT--LVGHTGGVWSSQMRDN--IIISGSTD-----RT 180 (445)
T ss_dssp EEEECSTTSCEEE--EEEETTEEEEEETTSCEEEEETTTCCEEEE--CCCCSSCEEEEEEETT--EEEEEETT-----SC
T ss_pred EEecccCCCcEEE--EEEcCCEEEEEECCCcEEEEECCCCcEEEE--EcCCCCCEEEEEecCC--EEEEEeCC-----Ce
Confidence 4567898875 55 445689999999 99999999987664433 4578888888888754 56677776 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
|++||+.+++.+..+. |...|.++.++++....+ .|+.|++||+.+++.+..+..|...+..+. ++ +..+++ |
T Consensus 181 i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~--~~--~~~l~~-~ 255 (445)
T 2ovr_B 181 LKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQ--YD--GRRVVS-G 255 (445)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEE--EC--SSCEEE-E
T ss_pred EEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEE--EC--CCEEEE-E
Confidence 9999999999999888 899999999987764444 799999999999999999988887555444 43 345654 6
Q ss_pred CCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 194 LQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 194 ~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
+.||.|++|+.. .+.+..+.+|...|.+++| ++.+|++++.|+. |++||+++++.+..+.. |...+.++.+ +
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~--~ 328 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTG--HQSLTSGMEL--K 328 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECC--CCSCEEEEEE--E
T ss_pred cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcC--CcccEEEEEE--e
Confidence 689999998865 4667788899999999999 8899999999999 99999999999999987 7778888887 4
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
+++|++++.||.|++||+++++.......+
T Consensus 329 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-------------------------------------------------- 358 (445)
T 2ovr_B 329 DNILVSGNADSTVKIWDIKTGQCLQTLQGP-------------------------------------------------- 358 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEEECST--------------------------------------------------
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEccC--------------------------------------------------
Confidence 679999999999999999887654211110
Q ss_pred EEEEeCCCceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 353 AQFHIPEVTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
..+...+..++|.+ +.|++++.||.|++|++..
T Consensus 359 ---~~~~~~v~~~~~~~-~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 359 ---NKHQSAVTCLQFNK-NFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp ---TSCSSCEEEEEECS-SEEEEEETTSEEEEEETTT
T ss_pred ---CCCCCCEEEEEECC-CEEEEEeCCCeEEEEECCC
Confidence 00123455667753 7899999999999998875
No 81
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.8e-29 Score=230.58 Aligned_cols=244 Identities=14% Similarity=0.143 Sum_probs=194.8
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|...|.+++|+|++++|++|+ |+.|++|+........... .+...+....+.+++..+++++.| +.++
T Consensus 81 ~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~ 153 (340)
T 4aow_A 81 ALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV--GHTKDVLSVAFSSDNRQIVSGSRD-----KTIK 153 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE--CCSSCEEEEEECTTSSCEEEEETT-----SCEE
T ss_pred EEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec--CCCCceeEEEEeecCccceeecCC-----CeEE
Confidence 4578999999999999999999999 9999999998755544443 455566677788888888888887 9999
Q ss_pred EEECCCCcEEEEEe--ecCceeEEEEcCCe--EEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEE
Q 015198 118 IWDDHQSRCIGEFA--FRSDVRSVKLSRDR--IVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 118 vwd~~~~~~~~~~~--~~~~i~~~~~~~~~--~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 190 (411)
+||+.......... |...+..++|++++ .+++ .|+.|++||+++++.+..+..|...+. ++.+++++.+|+
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~--~~~~s~~~~~l~ 231 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLN--TVTVSPDGSLCA 231 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE--EEEECTTSSEEE
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEE--EEEECCCCCEEE
Confidence 99987665443332 78899999998764 3333 689999999999999999988887554 455556667777
Q ss_pred EecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC-------CCCCcc
Q 015198 191 CPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR-------GVDRAE 263 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~-------~~~~~~ 263 (411)
+ |+.||.|++|+...........+...|.+++|+|++.++ +++.|+. |++||++++..+..+.. ..|...
T Consensus 232 s-~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~ 308 (340)
T 4aow_A 232 S-GGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQ 308 (340)
T ss_dssp E-EETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTE-EEEEETTTTEEEEEECCC-------CCCCC
T ss_pred E-EeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCE-EEEEECCCCeEEEeccccceeeeccCCCCC
Confidence 5 668999999998765544444456789999999998755 5566899 99999998877766643 136779
Q ss_pred eEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 264 IYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 264 v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
|++++|+|||++|++|+.||.|+|||+++|.
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 9999999999999999999999999999986
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.2e-29 Score=238.52 Aligned_cols=238 Identities=12% Similarity=0.110 Sum_probs=190.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCc---ceEEeecC-------------------------------------
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFK---ETFRRDLK------------------------------------- 84 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~---~~~~~~~~------------------------------------- 84 (411)
.+|.+++|+++|++|+++.++.|++||+.+++ .......+
T Consensus 5 ~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSI 84 (450)
T ss_dssp CCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC------------------------------------
T ss_pred ccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccc
Confidence 57899999999998887779999999998766 22221100
Q ss_pred ---------------CCCEEEEEEeccCCeEEE-EecCCCCCCCCCeEEEEECC--CCcEEEEEe---ecCceeEEEEcC
Q 015198 85 ---------------SGGFRIVEMLFRCNILAL-VGAGDNSQYPPTKVIIWDDH--QSRCIGEFA---FRSDVRSVKLSR 143 (411)
Q Consensus 85 ---------------~~~~~~~~~~~~~~~~~l-~s~~~d~~~~d~~i~vwd~~--~~~~~~~~~---~~~~i~~~~~~~ 143 (411)
.+...+.++.|++++..| ++++.| +.|++||+. +++.+..+. +...|.+++|+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 159 (450)
T 2vdu_B 85 KRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSD-----KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE 159 (450)
T ss_dssp ---------------CCCCCEEEEEECTTSSEEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT
T ss_pred cccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCC-----CeEEEEECcCCCCceeeeeecccCCCCceEEEEcC
Confidence 112258899999998875 888777 999999998 888888874 578999999999
Q ss_pred CeEEEE---EcCeEEEEEcCCceeeE----EEeccCCCcceEEEccCC-CceEEEEecCCCCeEEEEEcCC-cceEE-Ee
Q 015198 144 DRIVVV---LEHKIYVYSFVDLKLLH----QIETLANLRGLCCLSHHS-STSVLACPGLQRGQVRIEHFGL-NMIKL-IN 213 (411)
Q Consensus 144 ~~~~~~---~dg~i~iwd~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~dg~i~i~~~~~-~~~~~-~~ 213 (411)
++.+++ .++.|++|++.+++... .+..|...+..+++++++ .+.+|++ |+.|+.|++|+... ..+.. +.
T Consensus 160 ~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~ 238 (450)
T 2vdu_B 160 DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIIT-SDRDEHIKISHYPQCFIVDKWLF 238 (450)
T ss_dssp TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEE-EETTSCEEEEEESCTTCEEEECC
T ss_pred CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEE-EcCCCcEEEEECCCCceeeeeec
Confidence 998877 58999999998776544 666777755555555541 1566665 66899999998764 44555 45
Q ss_pred ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCC-----------------------CCCcceEEEEeC
Q 015198 214 AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRG-----------------------VDRAEIYSIALS 270 (411)
Q Consensus 214 ~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~-----------------------~~~~~v~~l~~s 270 (411)
+|...|.+++|+ ++++|++++.|+. |++||+.+++.+..+..+ .....|.+++|+
T Consensus 239 ~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 239 GHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp CCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred CCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 899999999999 9999999999999 999999999998888631 123478999999
Q ss_pred CCCCEEEEEe-CCCcEEEEEc
Q 015198 271 PNVQWLAVAS-DKGTVHIFSL 290 (411)
Q Consensus 271 pdg~~l~s~s-~dg~I~vwd~ 290 (411)
|++++|++++ .|+.|+||++
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEe
Confidence 9999999998 8999999999
No 83
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.7e-29 Score=258.13 Aligned_cols=202 Identities=10% Similarity=0.043 Sum_probs=162.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
..+|.+.|++++|+|++++||+|+ ||.|+||+....+.... + .+...+..+.|++ +.++++++.| +.|++
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~--~-~~~~~V~~l~fsp-g~~L~S~s~D-----~~v~l 83 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK--L-EDRSAIKEMRFVK-GIYLVVINAK-----DTVYV 83 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE--C-SSCCCEEEEEEET-TTEEEEEETT-----CEEEE
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE--c-CCCCCEEEEEEcC-CCEEEEEECc-----CeEEE
Confidence 358999999999999999999999 99999999876443222 3 4667889999999 5588888887 99999
Q ss_pred EECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeE-----------EEeccCCCcceEEEccCC
Q 015198 119 WDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLH-----------QIETLANLRGLCCLSHHS 184 (411)
Q Consensus 119 wd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~-----------~~~~~~~~~~~~~~~~~~ 184 (411)
||+.+++++..+.+...|.+++|+|++.+++ .||.|++||+++++... .+..|...+..++++++.
T Consensus 84 Wd~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 84 LSLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp EETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred EECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCC
Confidence 9999999999999889999999999999888 69999999999887631 123355555555554432
Q ss_pred CceEEEEecCCCCeEEEEEcCCc-ceEEEecc------------------ccceeEEEecCCCCEEEEEcCCCeEEEEEE
Q 015198 185 STSVLACPGLQRGQVRIEHFGLN-MIKLINAH------------------DSHIACFTLTLDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 185 ~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~~------------------~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd 245 (411)
+..++ +|+.||.| +|+.... .+..+..| ...|.+++|+|+|++|++++.|+. |++||
T Consensus 164 -~~~l~-~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd 239 (902)
T 2oaj_A 164 -IGTVL-ISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWD 239 (902)
T ss_dssp -EEEEE-EECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEE
T ss_pred -CCEEE-EEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEE
Confidence 23444 47799999 9997654 45555544 477999999999999999999999 99999
Q ss_pred CCCCceEEE
Q 015198 246 TVDGTRLQE 254 (411)
Q Consensus 246 ~~~~~~~~~ 254 (411)
+++++++..
T Consensus 240 ~~~g~~~~~ 248 (902)
T 2oaj_A 240 ANSGHMIMA 248 (902)
T ss_dssp TTTCCEEEE
T ss_pred CCCCcEEEE
Confidence 999987654
No 84
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=259.48 Aligned_cols=295 Identities=13% Similarity=0.155 Sum_probs=207.3
Q ss_pred cCCCCCCeEEEEEcCC-CCEEEEEe-CCcEEEEecCCCcceEEeecC----------------CCCEEEEEEeccCCeEE
Q 015198 40 SDVDEIELISVSWNQD-YGCFAAGT-SCGFRIYNCEPFKETFRRDLK----------------SGGFRIVEMLFRCNILA 101 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~-g~~la~g~-dg~i~iw~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 101 (411)
..+|.+.|++++|+|+ +..|++|+ |+.| |||+.+.+.......+ .|...+.++.|+|++..
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~ 225 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLH 225 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCE
Confidence 4689999999999996 57888888 9999 9999875544333211 12356999999999999
Q ss_pred EEecCCCCCCCCCeEEEEECCCCcEEEEEe------e-------------cCceeEEEEc----CCe-EEEE---Ec---
Q 015198 102 LVGAGDNSQYPPTKVIIWDDHQSRCIGEFA------F-------------RSDVRSVKLS----RDR-IVVV---LE--- 151 (411)
Q Consensus 102 l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~------~-------------~~~i~~~~~~----~~~-~~~~---~d--- 151 (411)
+++++.| +.|++||+++++++.... | ...|.+++|+ |++ .+++ .+
T Consensus 226 lasgs~D-----g~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 226 IITIHED-----NSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp EEEEETT-----CCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred EEEEECC-----CeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 9999998 999999999998876421 1 3468899994 553 3333 12
Q ss_pred --CeEEEEEc----------------------------------------------------------------------
Q 015198 152 --HKIYVYSF---------------------------------------------------------------------- 159 (411)
Q Consensus 152 --g~i~iwd~---------------------------------------------------------------------- 159 (411)
..+.+|++
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 25666652
Q ss_pred -CCceeeEE-------EeccCCCcceEE--------------------------------EccCCCceEEEEecCCCCeE
Q 015198 160 -VDLKLLHQ-------IETLANLRGLCC--------------------------------LSHHSSTSVLACPGLQRGQV 199 (411)
Q Consensus 160 -~~~~~~~~-------~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~g~~dg~i 199 (411)
.++..... +..+...+..++ +++++++.+|++ |+.|++|
T Consensus 381 ~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laS-gs~DgtV 459 (902)
T 2oaj_A 381 YPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFIT-GHSNGSV 459 (902)
T ss_dssp TTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEE-EETTSEE
T ss_pred CCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEE-ecCCCcE
Confidence 21111000 000001111111 233567777765 7799999
Q ss_pred EEEEcCCcceE---EEe---------ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc-----------------
Q 015198 200 RIEHFGLNMIK---LIN---------AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT----------------- 250 (411)
Q Consensus 200 ~i~~~~~~~~~---~~~---------~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~----------------- 250 (411)
++|+.....+. .+. +|...|.+++|+|+|++||+|+.||. |+|||+.+++
T Consensus 460 rlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~~~~~~~~~~~~~~~~~~~~~ 538 (902)
T 2oaj_A 460 RIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYEVNQFYSVENRPESGDLEMNF 538 (902)
T ss_dssp EEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEEECCC---------------C
T ss_pred EEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEecCccccCccccCCCcccceee
Confidence 99998754321 121 78899999999999999999999999 9999997663
Q ss_pred ----------------------------eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCC
Q 015198 251 ----------------------------RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSS 302 (411)
Q Consensus 251 ----------------------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~ 302 (411)
++..+.+ |.+.|++++|+||| +||+|+.|++|+|||++++.....
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~--h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~---- 611 (902)
T 2oaj_A 539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHA--NKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYM---- 611 (902)
T ss_dssp CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECC--CSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEE----
T ss_pred eeccccCCccccccccccCCCCCCCccceeEEEEc--CCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEE----
Confidence 3556666 88899999999999 999999999999999877653210
Q ss_pred CCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEE-eCCCceEEEEEc-----cC----CE
Q 015198 303 LSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFH-IPEVTHFIAAFG-----SQ----NT 372 (411)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~----~~ 372 (411)
. .+. .+. -+.+.+..++|+ ++ ..
T Consensus 612 ------------------------------------~-~~~----------~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~ 644 (902)
T 2oaj_A 612 ------------------------------------E-NIR----------EISGAQSACVTCIEFVIMEYGDDGYSSIL 644 (902)
T ss_dssp ------------------------------------E-EGG----------GTCSSCCCCEEEEEEEEEECTTSSSEEEE
T ss_pred ------------------------------------e-ehh----------HhccccccceEEEEEEEEecCCCCCcceE
Confidence 0 000 000 122356778888 77 47
Q ss_pred EEEEEeCCcEEEEEEecCCCCcEE
Q 015198 373 VVIVSMDGSFYRCSFDPVHGGEML 396 (411)
Q Consensus 373 ~~~~~~dg~~~~~~~~~~~~~~~~ 396 (411)
|++++.||.|++|++.+...|++.
T Consensus 645 l~sgs~D~tv~~wd~~p~~~g~~~ 668 (902)
T 2oaj_A 645 MVCGTDMGEVITYKILPASGGKFD 668 (902)
T ss_dssp EEEEETTSEEEEEEEEECGGGCEE
T ss_pred EEEEecCCcEEEEEEecCCCCcEE
Confidence 888999999999999776566655
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1e-28 Score=253.55 Aligned_cols=245 Identities=13% Similarity=0.130 Sum_probs=208.4
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++|+ ||.|+||++.+.+..... ..|...+.++.|++++..+++++.| +.|
T Consensus 49 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~d-----g~i 121 (814)
T 3mkq_A 49 RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDF--EAHPDYIRSIAVHPTKPYVLSGSDD-----LTV 121 (814)
T ss_dssp EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSEEEEEETT-----SEE
T ss_pred EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE--ecCCCCEEEEEEeCCCCEEEEEcCC-----CEE
Confidence 34568999999999999999999999 999999999986655444 3678889999999999888898887 999
Q ss_pred EEEECCCC-cEEEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccC-CCcceEEEccCCCceEE
Q 015198 117 IIWDDHQS-RCIGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLA-NLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 117 ~vwd~~~~-~~~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 189 (411)
++||+.++ .....+. |...|.+++|+| ++..++ .|+.|++||+.+++....+..+. ..+..+++++.+++.++
T Consensus 122 ~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 122 KLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp EEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEE
T ss_pred EEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEE
Confidence 99999887 5566666 889999999999 777776 68999999999888877776654 66677778776677787
Q ss_pred EEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 190 ACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
++ |+.||.|++|+.. ++.+..+.+|...|.+++|+|++++|++++.||. |++||+.+++.+..+.. +...+.+++
T Consensus 202 ~~-~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--~~~~v~~~~ 277 (814)
T 3mkq_A 202 IT-ASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNV--GLERSWCIA 277 (814)
T ss_dssp EE-ECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECC--SSSSEEEEE
T ss_pred EE-EeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeec--CCCcEEEEE
Confidence 76 6689999999865 4667788899999999999999999999999999 99999999999999887 677999999
Q ss_pred eCCCCC--EEEEEeCCCcEEEEEccccc
Q 015198 269 LSPNVQ--WLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 269 ~spdg~--~l~s~s~dg~I~vwd~~~~~ 294 (411)
|+|++. +++++ .++.+.+|++..+.
T Consensus 278 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 278 THPTGRKNYIASG-FDNGFTVLSLGNDE 304 (814)
T ss_dssp ECTTCGGGEEEEE-ETTEEEEEECSCCS
T ss_pred EccCCCceEEEEE-eCCCEEEEEcCCCC
Confidence 999987 35555 46669999987654
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.1e-28 Score=233.90 Aligned_cols=280 Identities=15% Similarity=0.201 Sum_probs=219.7
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|.+.|.+++|+ +++|++|+ ||.|++||+++.+.... +..|...+.++.++++. +++++.| +.|
T Consensus 153 ~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~--l~s~s~d-----g~i 221 (445)
T 2ovr_B 153 RTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT--LYGHTSTVRCMHLHEKR--VVSGSRD-----ATL 221 (445)
T ss_dssp EECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEEETTE--EEEEETT-----SEE
T ss_pred EEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE--ECCCCCcEEEEEecCCE--EEEEeCC-----CEE
Confidence 4567899999999998 56999999 99999999988654433 44777788888887654 6666666 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
++||+.+++.+..+. |...|.++.++......+ .|+.|++||+++++.+..+..|...+. ++.+ ++..+++ |+
T Consensus 222 ~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~--~~~~--~~~~l~~-~~ 296 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY--SLQF--DGIHVVS-GS 296 (445)
T ss_dssp EEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEE--EEEE--CSSEEEE-EE
T ss_pred EEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceE--EEEE--CCCEEEE-Ee
Confidence 999999999999887 899999999944333333 799999999999999999988877554 4444 3456655 66
Q ss_pred CCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC-CCcceEEEEeCCC
Q 015198 195 QRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV-DRAEIYSIALSPN 272 (411)
Q Consensus 195 ~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~-~~~~v~~l~~spd 272 (411)
.||.|++|+.. ++.+..+.+|...+.++.+ ++++|++++.||. |++||+++++.+..+.... |...|.+++|+
T Consensus 297 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-- 371 (445)
T 2ovr_B 297 LDTSIRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-- 371 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEEC--
T ss_pred CCCeEEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEEC--
Confidence 89999999875 5677788899999988877 5679999999999 9999999999998887532 66789999995
Q ss_pred CCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccce
Q 015198 273 VQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSF 352 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (411)
+++|++++.||.|++||+.+++........ .
T Consensus 372 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------------------------------------------~----- 402 (445)
T 2ovr_B 372 KNFVITSSDDGTVKLWDLKTGEFIRNLVTL--------------------------------------------E----- 402 (445)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEEEC--------------------------------------------T-----
T ss_pred CCEEEEEeCCCeEEEEECCCCceeeeeecc--------------------------------------------c-----
Confidence 589999999999999999988754211000 0
Q ss_pred EEEEeCCCceEEEEEccCC-EEEEEEeCCc----EEEEEEec
Q 015198 353 AQFHIPEVTHFIAAFGSQN-TVVIVSMDGS----FYRCSFDP 389 (411)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~-~~~~~~~dg~----~~~~~~~~ 389 (411)
.....+.+..++|++++ .+++++.||. +++|+++.
T Consensus 403 --~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 403 --SGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp --TGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred --cCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 00122456778999984 4566677897 99999886
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=7.7e-29 Score=265.70 Aligned_cols=282 Identities=13% Similarity=0.129 Sum_probs=224.8
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC--CeEEEEecCCCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC--NILALVGAGDNSQYPPT 114 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~d~~~~d~ 114 (411)
....+|.+.|.+++|+|++++|++|+ |+.|+|||+.+.+..... ..|...+.++.|++ +..++++++.| +
T Consensus 651 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~l~sg~~d-----~ 723 (1249)
T 3sfz_A 651 LDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTY--DEHSEQVNCCHFTNKSNHLLLATGSND-----F 723 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECCSSCEEEEEECSSSSCCEEEEEETT-----S
T ss_pred EEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEE--cCCCCcEEEEEEecCCCceEEEEEeCC-----C
Confidence 34568999999999999999999999 999999999986655444 36777888888887 66788888888 9
Q ss_pred eEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEe---------------------
Q 015198 115 KVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIE--------------------- 169 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~--------------------- 169 (411)
.|++||+.+++++..+. |...|.+++|+|++.+++ .||.|++||+.+++....+.
T Consensus 724 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 724 FLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp CEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred eEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 99999999999998887 899999999999998777 68999999998776555442
Q ss_pred ----------------------------------ccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEec
Q 015198 170 ----------------------------------TLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINA 214 (411)
Q Consensus 170 ----------------------------------~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~ 214 (411)
.|.. .+.++.+++++.++++ ++.+|.|++|+... ..+..+.+
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~v~~~~~sp~~~~l~~-~~~dg~v~vwd~~~~~~~~~~~~ 880 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHS--TIQYCDFSPYDHLAVI-ALSQYCVELWNIDSRLKVADCRG 880 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSS--CCCEEEECSSTTEEEE-ECSSSCEEEEETTTTEEEEEECC
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCC--ceEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceeeecCC
Confidence 2222 2334445556667765 66899999998764 55667788
Q ss_pred cccceeEEEecCCCCEEEEEcCCCeEEEEEECC-----------------------------------------------
Q 015198 215 HDSHIACFTLTLDGLLLATASTRGTLIRIFNTV----------------------------------------------- 247 (411)
Q Consensus 215 ~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~----------------------------------------------- 247 (411)
|...|.+++|+|+|++|++++.|+. |++||+.
T Consensus 881 h~~~v~~v~~spdg~~l~s~s~dg~-v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1249)
T 3sfz_A 881 HLSWVHGVMFSPDGSSFLTASDDQT-IRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYL 959 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSC-EEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEE
T ss_pred CccceEEEEECCCCCEEEEEeCCCe-EEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEc
Confidence 9999999999999999999888888 8888743
Q ss_pred --------------------------------CCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 248 --------------------------------DGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 248 --------------------------------~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
+++.+..+.. |...|.+++|+|+|++|++++.||.|++||+.+++.
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~ 1037 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG--HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDY 1037 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC--CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEE
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc--CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCce
Confidence 2233333333 777899999999999999999999999999998764
Q ss_pred CCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccCCEEEE
Q 015198 296 GEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTVVI 375 (411)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (411)
... ......+..++|++++.+++
T Consensus 1038 ~~~---------------------------------------------------------~~~~~~v~~~~~~~~~~l~~ 1060 (1249)
T 3sfz_A 1038 VFL---------------------------------------------------------QAHQETVKDFRLLQDSRLLS 1060 (1249)
T ss_dssp ECC---------------------------------------------------------BCCSSCEEEEEECSSSEEEE
T ss_pred EEE---------------------------------------------------------ecCCCcEEEEEEcCCCcEEE
Confidence 320 01113456678999999999
Q ss_pred EEeCCcEEEEEEec
Q 015198 376 VSMDGSFYRCSFDP 389 (411)
Q Consensus 376 ~~~dg~~~~~~~~~ 389 (411)
++.||.+++|++..
T Consensus 1061 ~~~dg~v~vwd~~~ 1074 (1249)
T 3sfz_A 1061 WSFDGTVKVWNVIT 1074 (1249)
T ss_dssp EESSSEEEEEETTT
T ss_pred EECCCcEEEEECCC
Confidence 99999999998865
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=2e-29 Score=254.36 Aligned_cols=242 Identities=14% Similarity=0.154 Sum_probs=193.3
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+|...|.+++|+|++++|++|+ |+.|+|||+.+...... +..|...+.++.|++++..+++++.| ++|+
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~ 497 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRD-----RTIK 497 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETT-----SCEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCC-----CEEE
Confidence 4678999999999999999999999 99999999987554433 44788889999999999999999988 9999
Q ss_pred EEECCCCcEEEEE----eecCceeEEEEcCCe--EEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceE
Q 015198 118 IWDDHQSRCIGEF----AFRSDVRSVKLSRDR--IVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSV 188 (411)
Q Consensus 118 vwd~~~~~~~~~~----~~~~~i~~~~~~~~~--~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (411)
+||+......... .|...|.+++|+|++ ..++ .|+.|++||+++++....+..|...+. ++.+++++.+
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~--~v~~spdg~~ 575 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVS--TVAVSPDGSL 575 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE--EEEECTTSSE
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE--EEEEeCCCCE
Confidence 9997554333322 167789999999986 3344 699999999999999999988887544 5555566677
Q ss_pred EEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC---------
Q 015198 189 LACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV--------- 259 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~--------- 259 (411)
|++ |+.||.|++|+...........+...|.+++|+|++.+|++++ ++. |+|||+++++.+..+....
T Consensus 576 l~s-g~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 576 CAS-GGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAAT-EHG-IKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EEE-EETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEE-TTE-EEEEETTTTEEEEEECCCCC--------
T ss_pred EEE-EeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEc-CCC-EEEEECCCCCChhhhccccccccccccc
Confidence 775 6689999999986543332234567899999999998887765 667 9999999998887775321
Q ss_pred --------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 260 --------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 260 --------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
+...+++++|+|||++|++|+.||.|+||++..
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp --------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred cccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 111378999999999999999999999999863
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2.3e-29 Score=235.63 Aligned_cols=238 Identities=11% Similarity=0.060 Sum_probs=188.4
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 41 DVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 41 ~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
.+|...|.+++|+| ++++|++++ |+.|++||+.............+...+.++.|++++..+++++.| +.|++
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i 189 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLL 189 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEE
Confidence 47999999999999 689999999 999999999863222222122344678899999999999999988 99999
Q ss_pred EECCCCcEEEEEe-ecCceeEEEEcCCeE-EEE---EcCeEEEEEcCC----ceeeEEEeccCCCcceEEEccCC-CceE
Q 015198 119 WDDHQSRCIGEFA-FRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVD----LKLLHQIETLANLRGLCCLSHHS-STSV 188 (411)
Q Consensus 119 wd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 188 (411)
||+ +++.+..+. |...|.+++|+|++. +++ .|+.|++||+++ ++.+..+ .|.. .+.++.+++ ++.+
T Consensus 190 ~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~--~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 190 LGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEK--PVNAAYFNPTDSTK 265 (383)
T ss_dssp EET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSS--CEEEEEECTTTSCE
T ss_pred EEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCC--ceEEEEEcCCCCCE
Confidence 998 677787777 899999999999987 555 699999999987 5666666 4555 455566666 6677
Q ss_pred EEEecCCCCeEEEEEcCC-cceEEEeccc-----------------cceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc
Q 015198 189 LACPGLQRGQVRIEHFGL-NMIKLINAHD-----------------SHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT 250 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~~-~~~~~~~~~~-----------------~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~ 250 (411)
|++ ++.|+.|++|+... .....+..|. ..+..++|+|++++ +++.|+. |++||+.+++
T Consensus 266 l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~-i~iwd~~~~~ 341 (383)
T 3ei3_B 266 LLT-TDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT-IDIYDANSGG 341 (383)
T ss_dssp EEE-EESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-EEEEETTTCC
T ss_pred EEE-EcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-EEEEecCCCc
Confidence 775 56899999998764 3445555442 33444667777766 7789999 9999999999
Q ss_pred eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 251 RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 251 ~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
.+..+..+.+...+..++|+|++++|++++ ||.|+|||+++
T Consensus 342 ~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 342 LVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp EEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred eeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 999998765567788889999999999997 99999999975
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-28 Score=228.64 Aligned_cols=250 Identities=9% Similarity=0.087 Sum_probs=204.4
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++++ |+.|++||+.+.+...... +...+..+.|++++..++++..+....++.|
T Consensus 68 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 68 GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 44668999999999999999999999 9999999999866554443 5667888999999888877665322334899
Q ss_pred EEEECCCCcE-----------EEEEe-ecC--ceeEEEEcCCeEEEE---EcCeEEEEEcCC-ceeeEEEeccCCCcceE
Q 015198 117 IIWDDHQSRC-----------IGEFA-FRS--DVRSVKLSRDRIVVV---LEHKIYVYSFVD-LKLLHQIETLANLRGLC 178 (411)
Q Consensus 117 ~vwd~~~~~~-----------~~~~~-~~~--~i~~~~~~~~~~~~~---~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~ 178 (411)
++||+..+.. +..+. +.. .+.+++|+|++.+++ .|+.|++||+++ ++.+..+..+...+ .
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v--~ 222 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI--S 222 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE--E
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce--e
Confidence 9999766532 22222 334 899999999998877 689999999998 78888888887754 4
Q ss_pred EEccCCCceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCC--------------eEEEEE
Q 015198 179 CLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRG--------------TLIRIF 244 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg--------------~~I~vw 244 (411)
++.+++++.+|++ ++.|+.|++|+...........+...+..++|+|+++++++++.++ . +++|
T Consensus 223 ~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-i~~~ 300 (369)
T 3zwl_B 223 DMQFSPDLTYFIT-SSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE-ARFY 300 (369)
T ss_dssp EEEECTTSSEEEE-EETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE-EEEE
T ss_pred EEEECCCCCEEEE-ecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce-eEEE
Confidence 5555566677776 5689999999987654444444889999999999999999999888 7 9999
Q ss_pred ECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 245 NTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 245 d~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
|+.+++.+..+.. |...|.+++|+|++++|++++.||.|+||+++++...
T Consensus 301 d~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~ 350 (369)
T 3zwl_B 301 HKIFEEEIGRVQG--HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFD 350 (369)
T ss_dssp ETTTCCEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHT
T ss_pred ecCCCcchhheec--ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccch
Confidence 9999999999988 8889999999999999999999999999999987644
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1.2e-29 Score=235.94 Aligned_cols=248 Identities=10% Similarity=0.047 Sum_probs=201.5
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|...|.+++|+|++++|++++ |+.|++|++++.+......+..+...+.++.|++++..+++++.+ +.|
T Consensus 46 ~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v 120 (372)
T 1k8k_C 46 HELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVI 120 (372)
T ss_dssp EEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSE
T ss_pred eeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEE
Confidence 34568999999999999999999999 999999999876544444445778889999999999999998887 999
Q ss_pred EEEECCCCcE---EEEEe--ecCceeEEEEcCCeEEEE---EcCeEEEEEc------------------CCceeeEEEec
Q 015198 117 IIWDDHQSRC---IGEFA--FRSDVRSVKLSRDRIVVV---LEHKIYVYSF------------------VDLKLLHQIET 170 (411)
Q Consensus 117 ~vwd~~~~~~---~~~~~--~~~~i~~~~~~~~~~~~~---~dg~i~iwd~------------------~~~~~~~~~~~ 170 (411)
++||+..++. ...+. |...|.+++|+|++.+++ .|+.|++||+ ..++.+..+..
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 9999888763 33332 688999999999998777 6899999995 36777878877
Q ss_pred cCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCC-
Q 015198 171 LANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVD- 248 (411)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~- 248 (411)
|...+ .++.+++++.+|++ ++.|+.|++|+.. ++.+..+..|...|.+++|+|++++|+++ .|+. |++||+.+
T Consensus 201 ~~~~v--~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-i~i~~~~~~ 275 (372)
T 1k8k_C 201 SCGWV--HGVCFSANGSRVAW-VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCF-PVLFTYDSA 275 (372)
T ss_dssp CSSCE--EEEEECSSSSEEEE-EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSS-CEEEEEETT
T ss_pred CCCeE--EEEEECCCCCEEEE-EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCe-EEEEEccCc
Confidence 76644 45555566667776 5689999999874 57788889999999999999999988888 8999 99999987
Q ss_pred -CceE--------------------------------------EEEeCCCCCcceEEEEeC-CCC---CEEEEEeCCCcE
Q 015198 249 -GTRL--------------------------------------QEVRRGVDRAEIYSIALS-PNV---QWLAVASDKGTV 285 (411)
Q Consensus 249 -~~~~--------------------------------------~~~~~~~~~~~v~~l~~s-pdg---~~l~s~s~dg~I 285 (411)
++.. ..+. ..|...|++++|. ++| .+|++++.||.|
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i 354 (372)
T 1k8k_C 276 AGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTTGMDGGM 354 (372)
T ss_dssp TTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEEETTSEE
T ss_pred CceEEEeeccCccccchhhhcchhhhhhhcccccccccCcccccccc-ccccCCcceeEEecCCCcceeeEEEecCCCce
Confidence 4210 1222 1278899999966 677 999999999999
Q ss_pred EEEEccccccC
Q 015198 286 HIFSLRVRVVG 296 (411)
Q Consensus 286 ~vwd~~~~~~~ 296 (411)
++||+++++..
T Consensus 355 ~~W~~~~~~~~ 365 (372)
T 1k8k_C 355 SIWDVRSLESA 365 (372)
T ss_dssp EEEEHHHHHHH
T ss_pred EEEEecChhHh
Confidence 99999998754
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.8e-30 Score=261.54 Aligned_cols=251 Identities=13% Similarity=0.106 Sum_probs=199.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCC--eEEEEecCCCCCCCCCe
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCN--ILALVGAGDNSQYPPTK 115 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~s~~~d~~~~d~~ 115 (411)
...+|.+.|++++|+|++++|++|+ ||.|+||++..........+..|...+.++.|+++ +..+++++.| |.
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~ 78 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GK 78 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SC
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----Ce
Confidence 4678999999999999999999999 99999999985444444556678888999999877 8889998888 99
Q ss_pred EEEEECCCCc--EEEEEe-ecCceeEEEEcCC--eEEEE---EcCeEEEEEcCCce--eeEEEeccCCCcceEEEccCC-
Q 015198 116 VIIWDDHQSR--CIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKIYVYSFVDLK--LLHQIETLANLRGLCCLSHHS- 184 (411)
Q Consensus 116 i~vwd~~~~~--~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~- 184 (411)
|++||+.+++ .+..+. |...|.+++|+|+ +..++ .||.|++||++++. ....+..|...+..+.+.+..
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 9999999886 555555 8999999999998 76666 68999999998763 334555666644444444421
Q ss_pred ----------CceEEEEecCCCCeEEEEEcCC-----cceEEEeccccceeEEEecCC---CCEEEEEcCCCeEEEEEEC
Q 015198 185 ----------STSVLACPGLQRGQVRIEHFGL-----NMIKLINAHDSHIACFTLTLD---GLLLATASTRGTLIRIFNT 246 (411)
Q Consensus 185 ----------~~~~l~~~g~~dg~i~i~~~~~-----~~~~~~~~~~~~i~~l~~sp~---g~~l~s~s~dg~~I~vwd~ 246 (411)
++..+++ |+.||.|++|+... .....+.+|...|.+++|+|+ +++|++++.||. |++||+
T Consensus 159 ~~~~~~~~~~d~~~l~s-gs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iwd~ 236 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVT-GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIWTQ 236 (753)
T ss_dssp --------CGGGCCEEE-EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEEEE
T ss_pred ccccccccCCCCCEEEE-EECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEecC
Confidence 4566665 66899999998764 345667889999999999999 899999999999 999999
Q ss_pred CCCceE---EEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 247 VDGTRL---QEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 247 ~~~~~~---~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
.+++.. .......|...|++++|+|+|++|++++.||.|++|+++.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~ 289 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 289 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCC
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCc
Confidence 887421 11122236778999999999999999999999999999976543
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=4e-29 Score=231.06 Aligned_cols=240 Identities=18% Similarity=0.210 Sum_probs=190.1
Q ss_pred CCCCCCeEEEEEcCC---CCEEEEEe-CCcEEEEecCCCc-ceEEeecCCCCEEEEEE------eccCCeEEEEecCCCC
Q 015198 41 DVDEIELISVSWNQD---YGCFAAGT-SCGFRIYNCEPFK-ETFRRDLKSGGFRIVEM------LFRCNILALVGAGDNS 109 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~---g~~la~g~-dg~i~iw~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l~s~~~d~ 109 (411)
.+|...|.+++|+|+ +++|++|+ |+.|++|++.+.+ .... +..|...+.++ .|++++..+++++.|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d- 138 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS--VKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD- 138 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE--ECCCSSCEEEEEEESGGGCC-CCCEEEEEETT-
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE--EEecccceEEEeeccccccCCCccEEEEEeCC-
Confidence 378999999999999 69999999 9999999999765 3333 33666677777 467888889999888
Q ss_pred CCCCCeEEEEECCCCc-EEEEEe-ec----CceeEEE----EcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcc
Q 015198 110 QYPPTKVIIWDDHQSR-CIGEFA-FR----SDVRSVK----LSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRG 176 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~-~~~~~~-~~----~~i~~~~----~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~ 176 (411)
+.|++||+.+++ .+..+. +. ..+.++. |++++.+++ .|+.|++||+++++.... ..+...
T Consensus 139 ----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~-- 211 (357)
T 3i2n_A 139 ----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNG-- 211 (357)
T ss_dssp ----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSC--
T ss_pred ----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCc--
Confidence 999999999887 677765 33 3888888 678888887 589999999999887544 445554
Q ss_pred eEEEccCC---CceEEEEecCCCCeEEEEEcCC-cceEE-----EeccccceeEEEecCCCC-EEEEEcCCCeEEEEEEC
Q 015198 177 LCCLSHHS---STSVLACPGLQRGQVRIEHFGL-NMIKL-----INAHDSHIACFTLTLDGL-LLATASTRGTLIRIFNT 246 (411)
Q Consensus 177 ~~~~~~~~---~~~~l~~~g~~dg~i~i~~~~~-~~~~~-----~~~~~~~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~ 246 (411)
+.++.+++ ++.++++ |+.||.|++|+... +.... +.+|...|.+++|+|+++ +|++++.||. |++||+
T Consensus 212 v~~~~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~ 289 (357)
T 3i2n_A 212 VCSLEFDRKDISMNKLVA-TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWKY 289 (357)
T ss_dssp EEEEEESCSSSSCCEEEE-EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEEE
T ss_pred eEEEEcCCCCCCCCEEEE-ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEeec
Confidence 44555555 5667765 56899999988654 33333 348999999999999998 8999999999 999999
Q ss_pred CCC-------------------ceEEEEeCCCCCcceEEEEeCCCCCEEE-EEeCCCcEEEEEccccc
Q 015198 247 VDG-------------------TRLQEVRRGVDRAEIYSIALSPNVQWLA-VASDKGTVHIFSLRVRV 294 (411)
Q Consensus 247 ~~~-------------------~~~~~~~~~~~~~~v~~l~~spdg~~l~-s~s~dg~I~vwd~~~~~ 294 (411)
+++ +.+..+.. |...|.+++|+|++++|+ +++.||.|+|||+.+.+
T Consensus 290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp ECCSCC--CCTTSCCCCCCCEEEEEEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred CCCcccccccCCCCccccccccceeecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 754 35666776 788999999999999998 89999999999998765
No 94
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.7e-29 Score=239.05 Aligned_cols=246 Identities=15% Similarity=0.198 Sum_probs=198.2
Q ss_pred ccCCCCCCeEEEEEcCC-CCEEEEEe-CCcEEEEecCC----------CcceEEeecCCCCEEEEEEeccCCeE-EEEec
Q 015198 39 FSDVDEIELISVSWNQD-YGCFAAGT-SCGFRIYNCEP----------FKETFRRDLKSGGFRIVEMLFRCNIL-ALVGA 105 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~-g~~la~g~-dg~i~iw~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~ 105 (411)
....|.+.|++++|+|+ +.+|++++ +|.|+||++.+ ...... +..|...+.++.|++++. .++++
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLR--LRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEE--EECCSSCCCCEEECTTSTTEEEEE
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEE--ecCCCCCeEEEEeCCCCCCeEEEE
Confidence 45679999999999998 67899999 99999999976 233333 346777888999999877 88888
Q ss_pred CCCCCCCCCeEEEEECCCCcE-------EEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCc---eeeEEEec
Q 015198 106 GDNSQYPPTKVIIWDDHQSRC-------IGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDL---KLLHQIET 170 (411)
Q Consensus 106 ~~d~~~~d~~i~vwd~~~~~~-------~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~---~~~~~~~~ 170 (411)
+.| |.|++||+.++.. ...+. |...|.+++|+| ++.+++ .|+.|++||++++ +.+..+..
T Consensus 201 ~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 201 SDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp CTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 887 9999999987422 23343 888999999999 555554 6999999999877 56777777
Q ss_pred cCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC--cceEEEeccccceeEEEecCCCC-EEEEEcCCCeEEEEEECC
Q 015198 171 LANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL--NMIKLINAHDSHIACFTLTLDGL-LLATASTRGTLIRIFNTV 247 (411)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~~~~~~~~~~~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~~ 247 (411)
|...+. ++.+++++..++++|+.||.|++|+... ..+..+..|...|.+++|+|+++ +|++++.|+. |+|||+.
T Consensus 276 ~~~~v~--~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~ 352 (430)
T 2xyi_A 276 HTAEVN--CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLS 352 (430)
T ss_dssp CSSCEE--EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGG
T ss_pred CCCCeE--EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCC
Confidence 776544 5555555554444577899999999875 56788899999999999999995 7999999999 9999997
Q ss_pred C--------------CceEEEEeCCCCCcceEEEEeCCCCC-EEEEEeCCCcEEEEEccccccC
Q 015198 248 D--------------GTRLQEVRRGVDRAEIYSIALSPNVQ-WLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 248 ~--------------~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
. .+.+..+.+ |...|.+++|+|+++ +|++++.||.|+||++..+...
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYN 414 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHHC
T ss_pred CCccccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEEECCCCEEEeEccccccc
Confidence 7 255555555 788999999999999 8999999999999999987654
No 95
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=245.10 Aligned_cols=243 Identities=12% Similarity=0.058 Sum_probs=185.6
Q ss_pred cCCCCCCeEEEEEcCC------CCEEEEEe-CCcEEEEecCCCcce---------EEeecCCCCEEEEEEeccCCeEEEE
Q 015198 40 SDVDEIELISVSWNQD------YGCFAAGT-SCGFRIYNCEPFKET---------FRRDLKSGGFRIVEMLFRCNILALV 103 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~------g~~la~g~-dg~i~iw~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~ 103 (411)
..+|.+.|++++|+|+ +.+||+++ ||+|+|||+...... ....+..|...+.++.|+++. .|+
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~la 281 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVV 281 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEE
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEE
Confidence 3567889999999997 57999999 999999999764321 011344677788999998876 578
Q ss_pred ecCCCCCCCCCeEEEEECCCCc-EEEEEe-ecCceeEE--EEcCCe-EEEE---EcCeEEEEEcCCceeeEEEeccCCCc
Q 015198 104 GAGDNSQYPPTKVIIWDDHQSR-CIGEFA-FRSDVRSV--KLSRDR-IVVV---LEHKIYVYSFVDLKLLHQIETLANLR 175 (411)
Q Consensus 104 s~~~d~~~~d~~i~vwd~~~~~-~~~~~~-~~~~i~~~--~~~~~~-~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~ 175 (411)
+|+.| |+|++||+.+++ ....+. |...|.++ .|++++ .+++ .|++|++||+++++.+..+..+....
T Consensus 282 sgs~D-----gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~ 356 (524)
T 2j04_B 282 CGFKN-----GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS 356 (524)
T ss_dssp EEETT-----SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCC
T ss_pred EEeCC-----CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccC
Confidence 88877 999999998764 444555 89999999 578887 6666 69999999999988877776665322
Q ss_pred ceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC-----
Q 015198 176 GLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG----- 249 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~----- 249 (411)
.+.+++++|++..+++ ++.|++|++|+... ..+..+.+|...|++++|+|+|++|++|+.|+. |++||+..+
T Consensus 357 ~v~~v~fsp~~~~l~s-~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~~~~ 434 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIY-SDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLLHGI 434 (524)
T ss_dssp SCCCEEEETTTTEEEE-ECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTTTCC
T ss_pred cccceEeCCCcCeEEE-eCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhcccc
Confidence 2333444555566665 56899999998654 556778899999999999999999999999999 999985321
Q ss_pred ---------------------------------------ceEEEEeCCCCCcceEEEEeCCCCC---EEEEEeCCCcEEE
Q 015198 250 ---------------------------------------TRLQEVRRGVDRAEIYSIALSPNVQ---WLAVASDKGTVHI 287 (411)
Q Consensus 250 ---------------------------------------~~~~~~~~~~~~~~v~~l~~spdg~---~l~s~s~dg~I~v 287 (411)
..+..+.+ |...|.+++|+|++. +||+|+.||.|+|
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~g--h~~~V~~Vafsp~~~~~~~lAsg~~~g~vrl 512 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDA--HGINITCTKWNETSAGGKCYAFSNSAGLLTL 512 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC---------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecC--CCceEEEEECCCCCCccHHHHhhccCceEEE
Confidence 01111222 667899999999964 9999999999999
Q ss_pred EEccc
Q 015198 288 FSLRV 292 (411)
Q Consensus 288 wd~~~ 292 (411)
|+++-
T Consensus 513 w~l~~ 517 (524)
T 2j04_B 513 EYLSL 517 (524)
T ss_dssp EECSC
T ss_pred EEccc
Confidence 99874
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=6.4e-29 Score=234.33 Aligned_cols=248 Identities=13% Similarity=0.150 Sum_probs=200.4
Q ss_pred cccCCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcc-----eEEeecCCCCEEEEEEeccCCe-EEEEecCCCC
Q 015198 38 AFSDVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKE-----TFRRDLKSGGFRIVEMLFRCNI-LALVGAGDNS 109 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~ 109 (411)
....+|.+.|++++|+| ++++|++|+ ||.|+||++.+... .....+..|...+.++.|++++ .++++++.|
T Consensus 75 ~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d- 153 (402)
T 2aq5_A 75 PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD- 153 (402)
T ss_dssp CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-
T ss_pred ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-
Confidence 34678999999999999 899999999 99999999987531 1122244788889999999998 688888887
Q ss_pred CCCCCeEEEEECCCCcEEEEE--e-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEE-eccCCCcceEEEcc
Q 015198 110 QYPPTKVIIWDDHQSRCIGEF--A-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQI-ETLANLRGLCCLSH 182 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~ 182 (411)
+.|++||+.+++.+..+ . |...|.+++|+|++.+++ .|+.|++||+++++.+..+ ..|... .+..+.+
T Consensus 154 ----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~ 228 (402)
T 2aq5_A 154 ----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-RPVHAVF 228 (402)
T ss_dssp ----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-SCCEEEE
T ss_pred ----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-cceEEEE
Confidence 99999999999999998 4 899999999999998777 6999999999999999888 566543 2344555
Q ss_pred CCCceEEEEec---CCCCeEEEEEcCCcc--eEEEe-ccccceeEEEecCCCCEEE-EEcCCCeEEEEEECCCCce-EEE
Q 015198 183 HSSTSVLACPG---LQRGQVRIEHFGLNM--IKLIN-AHDSHIACFTLTLDGLLLA-TASTRGTLIRIFNTVDGTR-LQE 254 (411)
Q Consensus 183 ~~~~~~l~~~g---~~dg~i~i~~~~~~~--~~~~~-~~~~~i~~l~~sp~g~~l~-s~s~dg~~I~vwd~~~~~~-~~~ 254 (411)
++++.+|++ | +.|+.|++|+..... +.... .|...+.+++|+|++++|+ +++.|+. |++||+.+++. +..
T Consensus 229 ~~~~~~l~~-g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 229 VSEGKILTT-GFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFLHY 306 (402)
T ss_dssp CSTTEEEEE-EECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCEEE
T ss_pred cCCCcEEEE-eccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcceEe
Confidence 566777765 5 689999999987532 33333 5778899999999999886 5567999 99999998884 555
Q ss_pred EeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 255 VRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 255 ~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
+....+...|.+++|+|++.++++ .++.+++|++.+++.
T Consensus 307 l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 307 LSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred ecccccCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 555336689999999999998764 566899999998653
No 97
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=233.39 Aligned_cols=240 Identities=14% Similarity=0.115 Sum_probs=190.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecC---CCcceE--------EeecCC--CCEEEEEEe--ccCCeEEEEec
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCE---PFKETF--------RRDLKS--GGFRIVEML--FRCNILALVGA 105 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~---~~~~~~--------~~~~~~--~~~~~~~~~--~~~~~~~l~s~ 105 (411)
+|...|.+++|+|++++|++|+ |+.|++||++ ..+... ...+.. +...+.++. +++++..++++
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 6999999999999999999999 9999999995 222111 111111 333344444 56788899999
Q ss_pred CCCCCCCCCeEEEEECCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEe-ccCCCcceE
Q 015198 106 GDNSQYPPTKVIIWDDHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIE-TLANLRGLC 178 (411)
Q Consensus 106 ~~d~~~~d~~i~vwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~ 178 (411)
+.| +.|++||+.+++.+..+. |...|.+++|+|++.+++ .|+.|++||+++++.+..+. .+...+..+
T Consensus 189 ~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 189 TNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp ETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred eCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 888 999999999999999887 689999999999998887 69999999999999998886 455444444
Q ss_pred EE--ccCCCceEEEEecCCCCeEEEEEcC-CcceEEEec--------------------------cccceeEEEecCCCC
Q 015198 179 CL--SHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINA--------------------------HDSHIACFTLTLDGL 229 (411)
Q Consensus 179 ~~--~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~--------------------------~~~~i~~l~~sp~g~ 229 (411)
++ .+++++.+|++ |+.||.|++|+.. ++.+..+.+ |...|.+++|+ +++
T Consensus 264 ~~~~~~s~~~~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~ 341 (437)
T 3gre_A 264 EVCQFYGKNSVIVVG-GSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK 341 (437)
T ss_dssp EECTTTCTTEEEEEE-ESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE
T ss_pred EeccccCCCccEEEE-EcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce
Confidence 44 44567777765 6789999999986 444555543 56678889999 778
Q ss_pred EEEEEcCCCeEEEEEECCCCceEEEEeCCC-----------------------------------CCcceEEEEeCCC--
Q 015198 230 LLATASTRGTLIRIFNTVDGTRLQEVRRGV-----------------------------------DRAEIYSIALSPN-- 272 (411)
Q Consensus 230 ~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~-----------------------------------~~~~v~~l~~spd-- 272 (411)
+|++++.|+. |++||+.+++.+..+..+. |...|++++|+++
T Consensus 342 ~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 342 ILLTDEATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEGGGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred EEEecCCCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 9999999999 9999999998877776531 6789999999988
Q ss_pred CCEEEEEeCCCcEEEEE
Q 015198 273 VQWLAVASDKGTVHIFS 289 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd 289 (411)
+.+|++|+.||.|+||+
T Consensus 421 ~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 TPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp SEEEEEEETTSCEEEEC
T ss_pred ceEEEEEcCCceEEEeC
Confidence 77999999999999995
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.3e-28 Score=225.23 Aligned_cols=247 Identities=12% Similarity=0.117 Sum_probs=194.0
Q ss_pred cCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC--CCcEEEEEe-ecCceeEEEEcCC--eEEEE---EcCeE
Q 015198 83 LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH--QSRCIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKI 154 (411)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~--~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i 154 (411)
+.+|...+.++.|++++.++++++.| +.|++||+. +++.+..+. |...|.+++|+++ +.+++ .|+.|
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v 81 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 81 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEE
Confidence 34788889999999999999999887 999999987 556666676 8999999999876 66666 68999
Q ss_pred EEEEcCCce--eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc---ceEEEeccccceeEEEecC---
Q 015198 155 YVYSFVDLK--LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN---MIKLINAHDSHIACFTLTL--- 226 (411)
Q Consensus 155 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~l~~sp--- 226 (411)
++||+.+++ .+..+..|...+..++++++..+.++++ ++.|+.|++|+.... ....+..|...|.+++|+|
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE-ecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 999999887 6666666766555444444422667765 568999999998754 4556778999999999999
Q ss_pred ----------CCCEEEEEcCCCeEEEEEECCCCc----eEEEEeCCCCCcceEEEEeCCC---CCEEEEEeCCCcEEEEE
Q 015198 227 ----------DGLLLATASTRGTLIRIFNTVDGT----RLQEVRRGVDRAEIYSIALSPN---VQWLAVASDKGTVHIFS 289 (411)
Q Consensus 227 ----------~g~~l~s~s~dg~~I~vwd~~~~~----~~~~~~~~~~~~~v~~l~~spd---g~~l~s~s~dg~I~vwd 289 (411)
++.+|++++.|+. |++||+++++ .+..+.. |...|.+++|+|+ +++|++++.||.|++||
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp ---------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEec--ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 6999999999999 9999998765 3345555 7889999999999 89999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEcc
Q 015198 290 LRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS 369 (411)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (411)
+++++...... .. ........+..++|++
T Consensus 238 ~~~~~~~~~~~------------------------------------~~---------------~~~~~~~~v~~~~~s~ 266 (379)
T 3jrp_A 238 QDNEQGPWKKT------------------------------------LL---------------KEEKFPDVLWRASWSL 266 (379)
T ss_dssp ESSTTSCCEEE------------------------------------ES---------------SSSCCSSCEEEEEECS
T ss_pred CCCCCccceee------------------------------------ee---------------ccccCCCcEEEEEEcC
Confidence 99875321000 00 0000123566789999
Q ss_pred C-CEEEEEEeCCcEEEEEEec
Q 015198 370 Q-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 370 ~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+ ..|++++.||.+++|++..
T Consensus 267 ~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 267 SGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp SSCCEEEEESSSSEEEEEEEE
T ss_pred CCCEEEEecCCCcEEEEeCCC
Confidence 8 6788888999999999985
No 99
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=1.7e-28 Score=231.47 Aligned_cols=239 Identities=8% Similarity=0.132 Sum_probs=190.0
Q ss_pred CeEEEEEcCCCCEEE-EEe-CCcEEEEecCCCcce--EEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEE
Q 015198 46 ELISVSWNQDYGCFA-AGT-SCGFRIYNCEPFKET--FRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 46 ~V~~l~~s~~g~~la-~g~-dg~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
....++++|+...++ +++ +|.|+||+++..... ....+.+|...+.++.|++ ++.++++++.| +.|++||
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d-----g~v~vw~ 110 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED-----CTVMVWE 110 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT-----SEEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC-----CeEEEEE
Confidence 445688999876555 456 999999999754322 1122457888999999999 88899999888 9999999
Q ss_pred CCCC-------cEEEEEe-ecCceeEEEEcCCe-EEEE---EcCeEEEEEcCCceeeEEE--eccCCCcceEEEccCCCc
Q 015198 121 DHQS-------RCIGEFA-FRSDVRSVKLSRDR-IVVV---LEHKIYVYSFVDLKLLHQI--ETLANLRGLCCLSHHSST 186 (411)
Q Consensus 121 ~~~~-------~~~~~~~-~~~~i~~~~~~~~~-~~~~---~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 186 (411)
+.++ +.+..+. |...|.+++|+|++ .+++ .|+.|++||+++++.+..+ ..|.. .+.++.+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~ 188 (402)
T 2aq5_A 111 IPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD--TIYSVDWSRDG 188 (402)
T ss_dssp CCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS--CEEEEEECTTS
T ss_pred ccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC--ceEEEEECCCC
Confidence 9887 5667777 89999999999998 4555 6999999999999999888 56666 44555556666
Q ss_pred eEEEEecCCCCeEEEEEcCC-cceEEE-eccccc-eeEEEecCCCCEEEEE---cCCCeEEEEEECCCCce-EEEEeCCC
Q 015198 187 SVLACPGLQRGQVRIEHFGL-NMIKLI-NAHDSH-IACFTLTLDGLLLATA---STRGTLIRIFNTVDGTR-LQEVRRGV 259 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~~-~~~~~~-~~~~~~-i~~l~~sp~g~~l~s~---s~dg~~I~vwd~~~~~~-~~~~~~~~ 259 (411)
.+|++ ++.||.|++|+... +.+..+ ..|... +.+++|+|++++|++| +.|+. |++||+++++. +......
T Consensus 189 ~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~~- 265 (402)
T 2aq5_A 189 ALICT-SCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQELD- 265 (402)
T ss_dssp SCEEE-EETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEECC-
T ss_pred CEEEE-EecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEecc-
Confidence 77776 56899999999764 556666 678776 8999999999999999 78999 99999998765 3333322
Q ss_pred CCcceEEEEeCCCCCEEEE-EeCCCcEEEEEccccc
Q 015198 260 DRAEIYSIALSPNVQWLAV-ASDKGTVHIFSLRVRV 294 (411)
Q Consensus 260 ~~~~v~~l~~spdg~~l~s-~s~dg~I~vwd~~~~~ 294 (411)
+...+.+++|+|++++|++ ++.||.|++||+.+++
T Consensus 266 ~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 5668999999999999975 5579999999999876
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.96 E-value=1.6e-28 Score=231.15 Aligned_cols=305 Identities=12% Similarity=0.090 Sum_probs=214.4
Q ss_pred CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe-----------
Q 015198 64 SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA----------- 131 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~----------- 131 (411)
++.+++|+++....... +..|...+.++.|+| ++.++++++.| +.|++||+.+++....+.
T Consensus 22 ~~~~~v~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 94 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDV--ERIHGGGINTLDIEPVEGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDH 94 (408)
T ss_dssp HHHHHHHTEEECTTEEE--CCCCSSCEEEEEECTTTCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTC
T ss_pred cCcceeeccccCcceee--eeccCCcEEEEEEecCCCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccc
Confidence 45577888876544333 347888999999999 99999999888 999999998876655543
Q ss_pred ---ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCC-CceEEEEecCCCCeEEEEE
Q 015198 132 ---FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHS-STSVLACPGLQRGQVRIEH 203 (411)
Q Consensus 132 ---~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~dg~i~i~~ 203 (411)
|...|.+++|+| ++.+++ .|+.|++||+.+++.+..+.. ...+..+.+.+.. ++.++++ |+.++.|++|+
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d 172 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAV-GTRGPKVQLCD 172 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEE-EESSSSEEEEE
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEE-EcCCCeEEEEe
Confidence 788999999999 555555 599999999999998888863 4444555555543 3445554 66899999988
Q ss_pred cC-CcceEEEeccccceeEEEecCCCC-EEEEEcCCCeEEEEEECCCCc-eEEEEeC-------------CCCCcceEEE
Q 015198 204 FG-LNMIKLINAHDSHIACFTLTLDGL-LLATASTRGTLIRIFNTVDGT-RLQEVRR-------------GVDRAEIYSI 267 (411)
Q Consensus 204 ~~-~~~~~~~~~~~~~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~~~~~-~~~~~~~-------------~~~~~~v~~l 267 (411)
.. ++.+..+..|...|.+++|+|+++ +|++++.||. |++||++++. .+..+.. ..|...|.++
T Consensus 173 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 173 LKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR-VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC-EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred CCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc-EEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 76 466778889999999999999998 6899999999 9999998876 3444311 2277899999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccc
Q 015198 268 ALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFS 347 (411)
Q Consensus 268 ~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (411)
+|+|++++|++++.||.|++||+.+++.......+............. ..+....-......+ ...+|+
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~-~i~v~d 320 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTV----------SCGCSSEFVFVPYGS-TIAVYT 320 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEE----------CCSSSSCEEEEEETT-EEEEEE
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEE----------ecCCCceEEEEecCC-EEEEEE
Confidence 999999999999999999999999987654332221100000000000 000000000000000 001111
Q ss_pred --cccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 348 --SEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 348 --~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.......++.+.+.+..++|+++ ..|++++.||.+++|++..
T Consensus 321 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 321 VYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC
T ss_pred CcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCC
Confidence 12334445555677888999998 7788888899999999986
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.1e-27 Score=217.15 Aligned_cols=241 Identities=13% Similarity=0.176 Sum_probs=193.2
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc-eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE-TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.....|...|.+++|+|++++|++|+ |+.|++|++..... .....+..+...+.++.|.++ .+++++.| +.
T Consensus 53 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~l~~~~~d-----~~ 125 (313)
T 3odt_A 53 TVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDG--VVISGSWD-----KT 125 (313)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETT--EEEEEETT-----SE
T ss_pred EEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCC--EEEEEeCC-----CC
Confidence 34567899999999999999999999 99999999875421 112234467778888888544 56666666 99
Q ss_pred EEEEECCCCcEEEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEec-cCCCcceEEEccCCCceEE
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIET-LANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 189 (411)
|++|| .++.+..+. |...+.++.+.+ ++..++ .|+.|++|| ..+....+.. +...+..++ +++++. +
T Consensus 126 i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~--~~~~~~-~ 198 (313)
T 3odt_A 126 AKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA--VVDDGH-F 198 (313)
T ss_dssp EEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE--EEETTE-E
T ss_pred EEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE--EcCCCe-E
Confidence 99999 677777777 899999999987 665555 689999999 4566666765 555444444 445555 4
Q ss_pred EEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 190 ACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
++ ++.||.|++|+.. ++.+..+..|...|.+++|+|++ .|++++.|+. |++||+++++.+..+.. |...|.+++
T Consensus 199 ~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~--~~~~i~~~~ 273 (313)
T 3odt_A 199 IS-CSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITL--PAISIWSVD 273 (313)
T ss_dssp EE-EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEEC--SSSCEEEEE
T ss_pred EE-ccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEec--cCceEEEEE
Confidence 44 6689999999876 56778889999999999999999 5889999999 99999999999999987 777999999
Q ss_pred eCCCCCEEEEEeCCCcEEEEEccccccCCC
Q 015198 269 LSPNVQWLAVASDKGTVHIFSLRVRVVGED 298 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd~~~~~~~~~ 298 (411)
|+|+++ +++++.||.|++||+++++....
T Consensus 274 ~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 274 CMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp ECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred EccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 999998 66799999999999999876543
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.5e-27 Score=225.41 Aligned_cols=276 Identities=11% Similarity=0.013 Sum_probs=218.2
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEe---ecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 44 EIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRR---DLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
...+.+++|+|++.+++++. ++.|++||+.+.+..... .+..+...+..+.|++++.++++++.+ +.|++|
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~ 196 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVF 196 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEE
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-----CEEEEE
Confidence 34567999999777777777 889999999876544321 223566788889999999999999887 999999
Q ss_pred ECCCCcEEEEEe-ecCceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 120 DDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 120 d~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
|+.+++.+..+. +...+.+++|+|++..++ .++.|++||+++++.+..+..+. ....+.+++++..+++++.
T Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 197 DLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG---LPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp ETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS---EEEEEEECTTSSEEEEEEE
T ss_pred ECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC---CceEEEEcCCCCEEEEEEC
Confidence 999999998887 788999999999987664 47999999999998887776543 3566777777777776542
Q ss_pred -------CCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEE-EEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEE
Q 015198 195 -------QRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLL-ATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYS 266 (411)
Q Consensus 195 -------~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l-~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~ 266 (411)
.|+.|++|+...........|...+..++|+|+++.+ ++++.++. |++||+.+++.+..+. +...+.+
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~---~~~~~~~ 349 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIP---VFDKPNT 349 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSSEEE
T ss_pred CCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEec---CCCCCCe
Confidence 4789999998765555555677789999999999754 66688999 9999999998888776 4567999
Q ss_pred EEeCCCCCEEEEEeC---------------CCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCC
Q 015198 267 IALSPNVQWLAVASD---------------KGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANP 331 (411)
Q Consensus 267 l~~spdg~~l~s~s~---------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (411)
++|+|+|++|++++. ||.|++||+.+++...
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~---------------------------------- 395 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKE---------------------------------- 395 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEE----------------------------------
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEE----------------------------------
Confidence 999999999988876 5799999998876432
Q ss_pred CCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEe-CCcEEEEEEe
Q 015198 332 GSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSM-DGSFYRCSFD 388 (411)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-dg~~~~~~~~ 388 (411)
.+.. ......++|+++ +.|++++. ||.+++|.++
T Consensus 396 ----------------------~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 396 ----------------------FWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ----------------------EEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ----------------------EecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 2222 124567889998 56677775 9999999886
No 103
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5e-28 Score=223.30 Aligned_cols=228 Identities=8% Similarity=0.013 Sum_probs=172.3
Q ss_pred EEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC-------
Q 015198 51 SWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH------- 122 (411)
Q Consensus 51 ~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~------- 122 (411)
.+.+++.+|++|+ ||.|++||+++.+...... ...+..+.++|+ +++++.| +.|++|+..
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~~s~s~D-----~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---IISRGPC-----NRLLLLYPGNQITILD 110 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---EEEECST-----TEEEEEETTTEEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---eEEecCC-----CeEEEEEccCceEEee
Confidence 4456788999999 9999999999866554432 233445667777 7788887 999999654
Q ss_pred --CCcEEEEEe--ecCceeEEEEcC--CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 123 --QSRCIGEFA--FRSDVRSVKLSR--DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 123 --~~~~~~~~~--~~~~i~~~~~~~--~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
+++.+..+. |...|.+++|+| ++.+++ .|+.|++||+++++.+.....+.. ..+.++.+++++.+|++ |
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-~~i~~~~~~pdg~~las-g 188 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD-VEYSSGVLHKDSLLLAL-Y 188 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS-CCCCEEEECTTSCEEEE-E
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC-CceEEEEECCCCCEEEE-E
Confidence 566566655 567899999999 888887 699999999999988766643322 13455566667777775 6
Q ss_pred CCCCeEEEEEcCCcc-e-EEEec-cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC-CCcce--EEE
Q 015198 194 LQRGQVRIEHFGLNM-I-KLINA-HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV-DRAEI--YSI 267 (411)
Q Consensus 194 ~~dg~i~i~~~~~~~-~-~~~~~-~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~-~~~~v--~~l 267 (411)
+.||.|++|+..... + ..+.. |..+|.+++|+|+|.+|++++ ++. |++||+++++.+..+.... +...+ .++
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQT-VVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSB-EEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCe-EEEEEcCCCCcceeecccccccccccceEE
Confidence 799999999977544 3 56777 999999999999999999999 458 9999999987654443200 11223 469
Q ss_pred EeCCCCCEEEEEeC-CCcEEEEEccccc
Q 015198 268 ALSPNVQWLAVASD-KGTVHIFSLRVRV 294 (411)
Q Consensus 268 ~~spdg~~l~s~s~-dg~I~vwd~~~~~ 294 (411)
+|+|+|++|++++. |+.|+||++++..
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 99999999999998 9999999997765
No 104
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=6.4e-29 Score=236.87 Aligned_cols=246 Identities=11% Similarity=0.060 Sum_probs=183.5
Q ss_pred ccCCCCCCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 39 FSDVDEIELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
...+|.+.|++|+|+| ++.+|++|+ |++|+|||+++.........+.....+.++.|++++.++++++.| +.|
T Consensus 159 ~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i 233 (435)
T 4e54_B 159 KGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNV 233 (435)
T ss_dssp CCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBE
T ss_pred EccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcE
Confidence 3568999999999998 688999999 999999999864333333233445567788899999999999988 999
Q ss_pred EEEECCCCcEEEEEe-ecCceeEEEEcCCeE-EEE---EcCeEEEEEcCCceeeEEE---eccCCCcceEEEccCCCceE
Q 015198 117 IIWDDHQSRCIGEFA-FRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVDLKLLHQI---ETLANLRGLCCLSHHSSTSV 188 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 188 (411)
++||+.. +.+..+. |...|.+++|+|++. +++ .|+.|++||+++.+....+ ..|.. .+.++.+++++.+
T Consensus 234 ~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~--~v~~~~~spdg~~ 310 (435)
T 4e54_B 234 ILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH--PVNAACFSPDGAR 310 (435)
T ss_dssp EEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS--CEEECCBCTTSSE
T ss_pred eeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc--cccceeECCCCCe
Confidence 9999764 4455555 899999999999875 443 6899999999876654433 34444 5667777888888
Q ss_pred EEEecCCCCeEEEEEcCC-cceEEEecccc------ceeEEEecCCCCEEEEEc------------CCCeEEEEEECCCC
Q 015198 189 LACPGLQRGQVRIEHFGL-NMIKLINAHDS------HIACFTLTLDGLLLATAS------------TRGTLIRIFNTVDG 249 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~------~i~~l~~sp~g~~l~s~s------------~dg~~I~vwd~~~~ 249 (411)
|++ |+.||.|+||+... .....+..|.. .+....|+|++.+++++. .++. |++||..++
T Consensus 311 l~s-~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-i~iwd~~~g 388 (435)
T 4e54_B 311 LLT-TDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT-IDVFDGNSG 388 (435)
T ss_dssp EEE-EESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC-EEEECSSSC
T ss_pred eEE-EcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE-EEEEECCCC
Confidence 876 66899999998764 44555554432 233456677776666553 3356 999999999
Q ss_pred ceEEEEeCCCCCcceEEE-EeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 250 TRLQEVRRGVDRAEIYSI-ALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 250 ~~~~~~~~~~~~~~v~~l-~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+.+..+..+ |...|.++ +|+|+|++|++|+ |+.|+||++++++.+
T Consensus 389 ~~~~~l~~~-~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 389 KMMCQLYDP-ESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CEEEEECCS-SCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred cEEEEEeCC-CCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 999888654 66778877 6999999999876 788999999998754
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=6.8e-28 Score=223.46 Aligned_cols=245 Identities=13% Similarity=0.108 Sum_probs=199.0
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEec--cCCeEEEEecCCCCCCCCC
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLF--RCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~~~d~~~~d~ 114 (411)
....+|...|.+++|+|++++|++++ |+.|++||+++.+... . ..+...+.++.| ++++..+++++.| +
T Consensus 80 ~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~--~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g 151 (368)
T 3mmy_A 80 KAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-I--AQHDAPVKTIHWIKAPNYSCVMTGSWD-----K 151 (368)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-E--EECSSCEEEEEEEECSSCEEEEEEETT-----S
T ss_pred EEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-e--ccccCceEEEEEEeCCCCCEEEEccCC-----C
Confidence 45668999999999999999999999 9999999999755433 2 256677778887 8999999999888 9
Q ss_pred eEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEe--ccCCCcceEEEccCCCc--eEE
Q 015198 115 KVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIE--TLANLRGLCCLSHHSST--SVL 189 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~l 189 (411)
.|++||+.+++.+..+.....+.++.+.++..+++ .++.+++|+++......... ........+.+.+.... ..+
T Consensus 152 ~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (368)
T 3mmy_A 152 TLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGF 231 (368)
T ss_dssp EEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEE
T ss_pred cEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeE
Confidence 99999999999999999778899999998876666 79999999997764433332 12233345555554432 224
Q ss_pred EEecCCCCeEEEEEcCC----cceEEEecccc------------ceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEE
Q 015198 190 ACPGLQRGQVRIEHFGL----NMIKLINAHDS------------HIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQ 253 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~----~~~~~~~~~~~------------~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~ 253 (411)
+ +|+.||.|++|+... ..+..+..|.. .|.+++|+|++++|++++.||. |++||+.+++++.
T Consensus 232 ~-~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 232 A-LGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLK 309 (368)
T ss_dssp E-EEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEE
T ss_pred E-EecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEE
Confidence 4 467899999999876 45667777776 7999999999999999999999 9999999999998
Q ss_pred EEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 254 EVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 254 ~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.+.. |...|.+++|+|+|++|++++.|+..+.|++...+
T Consensus 310 ~~~~--~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~ 348 (368)
T 3mmy_A 310 TSEQ--LDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQ 348 (368)
T ss_dssp ECCC--CSSCEEEEEECTTSSCEEEEECCCSTTCGGGCCTT
T ss_pred EecC--CCCCceEEEECCCCCeEEEEecccccccccccCCC
Confidence 8887 78899999999999999999999876666655444
No 106
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.2e-29 Score=235.06 Aligned_cols=240 Identities=13% Similarity=0.104 Sum_probs=185.1
Q ss_pred CCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCC--cEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEc
Q 015198 86 GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQS--RCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSF 159 (411)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~--~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~ 159 (411)
+...+.++.|++++.++++++.| +.|++||+.++ +.+..+. |...|.+++|+|++.+++ .|+.|++||+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCCcEEEEEECCCCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34467788899999999999888 99999999888 5666666 899999999999988777 6899999999
Q ss_pred CCce---eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcc----eEEEec-cccceeEEEecCCCCEE
Q 015198 160 VDLK---LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNM----IKLINA-HDSHIACFTLTLDGLLL 231 (411)
Q Consensus 160 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~----~~~~~~-~~~~i~~l~~sp~g~~l 231 (411)
.+++ ....+..|.. .+.++.+++++.+|++ |+.|+.|++|+..... ...+.. |...|.+++|+|++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNR--AATFVRWSPNEDKFAV-GSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ----CCCCEEECCCCSS--CEEEEECCTTSSCCEE-EESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred CCCCceeeeeEecccCC--ceEEEEECCCCCEEEE-EecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 8876 4555566665 4556666667777775 5689999999887653 677777 99999999999999999
Q ss_pred EEEcCCCeEEEEEECCC------------------CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 232 ATASTRGTLIRIFNTVD------------------GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 232 ~s~s~dg~~I~vwd~~~------------------~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
++++.|+. |++||+.. ++.+..+ . |...|.+++|+|++++|++++.||.|++||++++
T Consensus 162 ~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 162 AAGCADRK-AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-P--SGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEESSSC-EEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-C--CSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEeCCCE-EEEEEEEecccCCCccccccccccchhhhhhcc-c--CCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 99999999 99999853 4455555 3 8889999999999999999999999999999988
Q ss_pred ccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccCCEE
Q 015198 294 VVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQNTV 373 (411)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (411)
+.... ....+..+...+..++|++++.+
T Consensus 238 ~~~~~----------------------------------------------------~~~~~~~~~~~v~~~~~s~~~~~ 265 (377)
T 3dwl_C 238 EQPPR----------------------------------------------------ALITVKLSQLPLRSLLWANESAI 265 (377)
T ss_dssp TSCEE----------------------------------------------------ECCCEECSSSCEEEEEEEETTEE
T ss_pred CCcce----------------------------------------------------eeEeecCCCCceEEEEEcCCCCE
Confidence 75100 00123333456678899999888
Q ss_pred EEEEeCCcEEEEEEec
Q 015198 374 VIVSMDGSFYRCSFDP 389 (411)
Q Consensus 374 ~~~~~dg~~~~~~~~~ 389 (411)
++++.++.+.+|....
T Consensus 266 l~~~~~~~~~~~~~~~ 281 (377)
T 3dwl_C 266 VAAGYNYSPILLQGNE 281 (377)
T ss_dssp EEEESSSSEEEECCCC
T ss_pred EEEEcCCcEEEEEeCC
Confidence 8999998888997763
No 107
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=4.5e-27 Score=223.74 Aligned_cols=253 Identities=11% Similarity=0.126 Sum_probs=190.0
Q ss_pred CCCEEEEEEeccCC-eEEEEecCCCCCCCCCeEEEEECCC----------CcEEEEEe-ecCceeEEEEcCCeE-EEE--
Q 015198 85 SGGFRIVEMLFRCN-ILALVGAGDNSQYPPTKVIIWDDHQ----------SRCIGEFA-FRSDVRSVKLSRDRI-VVV-- 149 (411)
Q Consensus 85 ~~~~~~~~~~~~~~-~~~l~s~~~d~~~~d~~i~vwd~~~----------~~~~~~~~-~~~~i~~~~~~~~~~-~~~-- 149 (411)
.|...+.++.|+++ ..++++++.+ |.|++||+.+ .+.+..+. |...|.+++|+|++. +++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~d-----g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~ 200 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPS-----SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSA 200 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSS-----SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCC-----CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEE
Confidence 56667888899997 6788888887 9999999876 56666666 899999999999876 555
Q ss_pred -EcCeEEEEEcCCcee-------eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC----cceEEEecccc
Q 015198 150 -LEHKIYVYSFVDLKL-------LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL----NMIKLINAHDS 217 (411)
Q Consensus 150 -~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~----~~~~~~~~~~~ 217 (411)
.||.|++||+.++.. ...+..|...+..+++++. ++.+++ +++.||.|++|+... ..+..+..|..
T Consensus 201 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~~l~-s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 201 SDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLL-HESLFG-SVADDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp CTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSS-CTTEEE-EEETTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred eCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCC-CCCEEE-EEeCCCeEEEEECCCCCCCcceeEeecCCC
Confidence 689999999987322 3455566665555555443 334554 466899999999875 36777889999
Q ss_pred ceeEEEecCCCC-EEEEEcCCCeEEEEEECCC-CceEEEEeCCCCCcceEEEEeCCCCC-EEEEEeCCCcEEEEEccccc
Q 015198 218 HIACFTLTLDGL-LLATASTRGTLIRIFNTVD-GTRLQEVRRGVDRAEIYSIALSPNVQ-WLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 218 ~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~~~-~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s~dg~I~vwd~~~~~ 294 (411)
.|++++|+|++. +|++|+.||. |++||+++ +..+..+.. |...|.+++|+|+++ +|++++.||.|+|||+....
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999999999997 7899999999 99999998 566788887 788999999999985 68999999999999998854
Q ss_pred cCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-C-E
Q 015198 295 VGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-N-T 372 (411)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 372 (411)
........+ ..+ + .....+..+...+..++|+++ . .
T Consensus 356 ~~~~~~~~~-------------------------~~~-----------~------~~~~~~~~h~~~v~~~~~~p~~~~~ 393 (430)
T 2xyi_A 356 EEQSTEDAE-------------------------DGP-----------P------ELLFIHGGHTAKISDFSWNPNEPWI 393 (430)
T ss_dssp CCCCHHHHH-------------------------HCC-----------T------TEEEECCCCSSCEEEEEECSSSTTE
T ss_pred cccCccccc-------------------------cCC-----------c------ceEEEcCCCCCCceEEEECCCCCCE
Confidence 321000000 000 0 001111222345778899998 4 6
Q ss_pred EEEEEeCCcEEEEEEec
Q 015198 373 VVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 373 ~~~~~~dg~~~~~~~~~ 389 (411)
|++++.||.|++|.+..
T Consensus 394 l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 394 ICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEETTSEEEEEEECH
T ss_pred EEEEECCCCEEEeEccc
Confidence 88888899999999985
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.3e-26 Score=215.65 Aligned_cols=222 Identities=16% Similarity=0.109 Sum_probs=179.1
Q ss_pred EEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEE-EecCCCCCCCCCeEEEEECCCCcEEEEEeecCc
Q 015198 58 CFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILAL-VGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSD 135 (411)
Q Consensus 58 ~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~ 135 (411)
++++++ |+.|++||+++.+...... ++..+.++.|++++..+ ++++.+ +.|++||+.+++.+..+.+...
T Consensus 4 l~vs~~~d~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~~ 75 (391)
T 1l0q_A 4 AYIANSESDNISVIDVTSNKVTATIP---VGSNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIATVPAGSS 75 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSS
T ss_pred EEEEcCCCCEEEEEECCCCeEEEEee---cCCCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEEEECCCC
Confidence 566777 9999999998865544433 23347889999988644 666666 9999999999999999987779
Q ss_pred eeEEEEcCCeEEEE----EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceE
Q 015198 136 VRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIK 210 (411)
Q Consensus 136 i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~ 210 (411)
+.+++|+|++..++ .++.|++||+.+++.+..+..+. ....+.+++++..++++++.++.|++|+... +.+.
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN 152 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 99999999998664 46999999999999888887654 3456677777777766677899999998765 4445
Q ss_pred EEeccccceeEEEecCCCCEE-EEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEe---CCCcEE
Q 015198 211 LINAHDSHIACFTLTLDGLLL-ATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVAS---DKGTVH 286 (411)
Q Consensus 211 ~~~~~~~~i~~l~~sp~g~~l-~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s---~dg~I~ 286 (411)
.+..+ ..+..++|+|++++| ++++.++. |++||+++++.+..+. +...+.+++|+|++++|++++ .++.|+
T Consensus 153 ~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVK---VEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEE---CSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred EEecC-CCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEe---cCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 55544 556899999999977 57788899 9999999998887776 455789999999999999888 689999
Q ss_pred EEEcccccc
Q 015198 287 IFSLRVRVV 295 (411)
Q Consensus 287 vwd~~~~~~ 295 (411)
+||+.+++.
T Consensus 228 ~~d~~~~~~ 236 (391)
T 1l0q_A 228 MIDTGTNKI 236 (391)
T ss_dssp EEETTTTEE
T ss_pred EEECCCCeE
Confidence 999988764
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=3e-27 Score=225.30 Aligned_cols=237 Identities=13% Similarity=0.268 Sum_probs=189.1
Q ss_pred cccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 38 AFSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 38 ~~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+|.+.|.+++| ++++|++|+ ||.|++||+.+.+.... +..|...+.++.|+++ .+++++.| +.|
T Consensus 167 ~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~--~l~s~s~d-----g~i 235 (435)
T 1p22_A 167 RILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNG--MMVTCSKD-----RSI 235 (435)
T ss_dssp EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE--ECCCCSCEEEEECCTT--EEEEEETT-----SCE
T ss_pred EEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCC--EEEEeeCC-----CcE
Confidence 346689999999999 788999999 99999999998665443 4477788899999865 56666776 999
Q ss_pred EEEECCCCcEE---EEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 117 IIWDDHQSRCI---GEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 117 ~vwd~~~~~~~---~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
++||+.+++.+ ..+. |...|.++.+..+....+ .|+.|++||+++++.+..+..|...+. ++.+++ .++++
T Consensus 236 ~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~--~~~~~~--~~l~~ 311 (435)
T 1p22_A 236 AVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA--CLQYRD--RLVVS 311 (435)
T ss_dssp EEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE--EEEEET--TEEEE
T ss_pred EEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE--EEEeCC--CEEEE
Confidence 99999888765 3333 889999999955443333 799999999999999999998887554 444443 45554
Q ss_pred ecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc---------eEEEEeCCCCC
Q 015198 192 PGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT---------RLQEVRRGVDR 261 (411)
Q Consensus 192 ~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~---------~~~~~~~~~~~ 261 (411)
|+.||.|++|+.. ++.+..+.+|...|.+++| ++.+|++|+.||. |++||+.+++ .+..+.. |.
T Consensus 312 -g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~--h~ 385 (435)
T 1p22_A 312 -GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLVE--HS 385 (435)
T ss_dssp -EETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEECC--CS
T ss_pred -EeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeeccC--CC
Confidence 6689999999876 5778888999999999999 7889999999999 9999997766 7778877 88
Q ss_pred cceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCC
Q 015198 262 AEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
..|.+++| ++.+|++++.||.|++||+.++....
T Consensus 386 ~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 386 GRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp SCCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred CCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 89999999 78899999999999999999876543
No 110
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.96 E-value=1.3e-27 Score=219.74 Aligned_cols=229 Identities=13% Similarity=0.100 Sum_probs=189.0
Q ss_pred ccCCCCCCeEEEEEcCCCC-EEEEEe-CCcEEEEec-CCCcceEEeecCC--CCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 39 FSDVDEIELISVSWNQDYG-CFAAGT-SCGFRIYNC-EPFKETFRRDLKS--GGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~-~la~g~-dg~i~iw~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
...+|...|.+++|+|+++ +|++|+ |+.|++|++ ++... ..+.. +...+.++.|++ +..+++++.|
T Consensus 51 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d----- 121 (342)
T 1yfq_A 51 QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF---QALTNNEANLGICRICKYG-DDKLIAASWD----- 121 (342)
T ss_dssp EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE---EECBSCCCCSCEEEEEEET-TTEEEEEETT-----
T ss_pred eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce---EeccccCCCCceEEEEeCC-CCEEEEEcCC-----
Confidence 3458999999999999999 999999 999999999 76443 23446 788889999998 7777888877
Q ss_pred CeEEEEECCC---------CcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCC-ceeeE--EEeccCCCcceEEE
Q 015198 114 TKVIIWDDHQ---------SRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVD-LKLLH--QIETLANLRGLCCL 180 (411)
Q Consensus 114 ~~i~vwd~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~-~~~~~--~~~~~~~~~~~~~~ 180 (411)
+.|++||+.+ ++++..+.+...|.+++|++++.+++ .|+.|++||+++ ++... ....+.. .+.++
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~--~i~~i 199 (342)
T 1yfq_A 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY--QIRDV 199 (342)
T ss_dssp SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSS--CEEEE
T ss_pred CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCC--ceeEE
Confidence 9999999887 76666667889999999999993333 789999999987 54322 2233333 55666
Q ss_pred ccCC-CceEEEEecCCCCeEEEEEcCC-------cceEEEecccc---------ceeEEEecCCCCEEEEEcCCCeEEEE
Q 015198 181 SHHS-STSVLACPGLQRGQVRIEHFGL-------NMIKLINAHDS---------HIACFTLTLDGLLLATASTRGTLIRI 243 (411)
Q Consensus 181 ~~~~-~~~~l~~~g~~dg~i~i~~~~~-------~~~~~~~~~~~---------~i~~l~~sp~g~~l~s~s~dg~~I~v 243 (411)
.+++ ++.++++ |+.||.|++|+.+. .....+..|.. .|.+++|+|++++|++++.||. |++
T Consensus 200 ~~~~~~~~~l~~-~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~v 277 (342)
T 1yfq_A 200 ALLPKEQEGYAC-SSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISC 277 (342)
T ss_dssp EECSGGGCEEEE-EETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEE
T ss_pred EECCCCCCEEEE-EecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEE
Confidence 7777 6777776 56899999988754 55677788865 9999999999999999999999 999
Q ss_pred EECCCCceEEEEeCCCC-CcceEEEEeCCCCCEEEEEeCCCc
Q 015198 244 FNTVDGTRLQEVRRGVD-RAEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 244 wd~~~~~~~~~~~~~~~-~~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
||+.+++.+..+.. | ...|.+++ |++++|++++.||.
T Consensus 278 wd~~~~~~~~~~~~--~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 278 WNLQTRKKIKNFAK--FNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EETTTTEEEEECCC--CSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred EcCccHhHhhhhhc--ccCCCceEec--CCCCeEEEEecCCc
Confidence 99999999988887 5 88999999 99999999999998
No 111
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=1e-26 Score=213.41 Aligned_cols=287 Identities=11% Similarity=0.103 Sum_probs=193.9
Q ss_pred cCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCC----cEEEEEe-ecCceeEEEEcC--CeEEEE---EcC
Q 015198 83 LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQS----RCIGEFA-FRSDVRSVKLSR--DRIVVV---LEH 152 (411)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~----~~~~~~~-~~~~i~~~~~~~--~~~~~~---~dg 152 (411)
+.+|...+.++.|++++.++++++.| +.|++||+.++ +.+..+. |...|.+++|+| ++.+++ .|+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CcccccceeEEEEcCCCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 34788899999999999999999988 99999998876 3555565 899999999999 466666 699
Q ss_pred eEEEEEcCCc---------eeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEE----------
Q 015198 153 KIYVYSFVDL---------KLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLI---------- 212 (411)
Q Consensus 153 ~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~---------- 212 (411)
.|++||++++ +.+..+..|...+..+++.++..+.++++ ++.||.|++|+... +.+..+
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCChHHhccccccccccccc
Confidence 9999999876 55777777777555444444321667765 56899999998654 222221
Q ss_pred ---eccccceeEEEecCC---CCEEEEEcCCCeEEEEEECCCCce--EEEEeCCCCCcceEEEEeCCCC----CEEEEEe
Q 015198 213 ---NAHDSHIACFTLTLD---GLLLATASTRGTLIRIFNTVDGTR--LQEVRRGVDRAEIYSIALSPNV----QWLAVAS 280 (411)
Q Consensus 213 ---~~~~~~i~~l~~sp~---g~~l~s~s~dg~~I~vwd~~~~~~--~~~~~~~~~~~~v~~l~~spdg----~~l~s~s 280 (411)
..|...+.+++|+|+ +.+|++++.++. +.+|+...++. +..+.. |...|.+++|+|++ ++|++++
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~--h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHVAAKLPG--HKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEEEEECCC--CCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceeeeeecCC--CCcceeEEEECCCCCCcceEEEEEc
Confidence 157889999999997 899999999999 98888877775 444444 88899999999998 8999999
Q ss_pred CCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCccccc--ccceEEEEeC
Q 015198 281 DKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSS--EWSFAQFHIP 358 (411)
Q Consensus 281 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 358 (411)
.||.|++||++++........... .......+................ .....+.. ......++-+
T Consensus 238 ~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 238 KDGRIRIFKITEKLSPLASEESLT----NSNMFDNSADVDMDAQGRSDSNTE--------EKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp TTSCEEEEEEEECC---------------------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCeEEEEeCCCCcCccccCCccc----ceeccCCCcccccccccccccccc--------eeeeecccccccEEEEEecc
Confidence 999999999998754432111100 000000000000000000000000 00011111 1122334444
Q ss_pred CCceEEEEEccC-CEEEEEEeCCcEEEEEEecC
Q 015198 359 EVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDPV 390 (411)
Q Consensus 359 ~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~~ 390 (411)
...+..++|+++ +.|++++.||.|++|++...
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 567888999998 67888888999999999973
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=6.7e-27 Score=217.53 Aligned_cols=279 Identities=13% Similarity=0.071 Sum_probs=205.9
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CC-------cEEEEecCCCcce--------EEeecCCCCEEEEEEeccCCeEEEE----
Q 015198 44 EIELISVSWNQDYGCFAAGT-SC-------GFRIYNCEPFKET--------FRRDLKSGGFRIVEMLFRCNILALV---- 103 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg-------~i~iw~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~---- 103 (411)
.-+|++++|+||+++|++|+ +. .|++|+++..... ....+..+...+.++.++++..+..
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~g~~~~ 93 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILVGCNEN 93 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEEECCCC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEEEECCC
Confidence 45899999999999999987 32 4999998754321 1233456666677777766644322
Q ss_pred -----ecCCCCCCCCCeEEEEECCCCcE-EEEEe---------ecCceeEEEEcCCeEEEE-----EcCeEEEEEcCCce
Q 015198 104 -----GAGDNSQYPPTKVIIWDDHQSRC-IGEFA---------FRSDVRSVKLSRDRIVVV-----LEHKIYVYSFVDLK 163 (411)
Q Consensus 104 -----s~~~d~~~~d~~i~vwd~~~~~~-~~~~~---------~~~~i~~~~~~~~~~~~~-----~dg~i~iwd~~~~~ 163 (411)
+++.| +.+++|++..... +.... +...+.+++|+|||++++ .|+.|++||+++++
T Consensus 94 ~~~l~s~~~d-----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 94 STKITQGKGN-----KHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp HHHHHHTSCC-----CCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred ccEEEEecCC-----CcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 23334 8999999766532 22221 234588999999998865 48999999999999
Q ss_pred eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEE--EeccccceeEEEecCCCCEEEEEcCCC---
Q 015198 164 LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKL--INAHDSHIACFTLTLDGLLLATASTRG--- 238 (411)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~--~~~~~~~i~~l~~sp~g~~l~s~s~dg--- 238 (411)
.+..+. +... +.+++++|++.++++ ++.++.+.+|...+..+.. ...|...|.+++|+|+++++++++.|+
T Consensus 169 ~~~~~~-~~~~--V~~v~fspdg~~l~s-~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 169 EKFEIE-TRGE--VKDLHFSTDGKVVAY-ITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp EEEEEE-CSSC--CCEEEECTTSSEEEE-ECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred EEEEeC-CCCc--eEEEEEccCCceEEe-ccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 998886 4444 445566667788876 4455554446666655433 356888999999999999999998877
Q ss_pred -eEEEEEECCCCce----EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccc
Q 015198 239 -TLIRIFNTVDGTR----LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELL 313 (411)
Q Consensus 239 -~~I~vwd~~~~~~----~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 313 (411)
. +++||+..+.. ...+.. |...|++++|+|||++||+|+.|++|+|||+++++......
T Consensus 245 ~~-i~~~~~~~~~~~~~~~~~~~~--~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~------------- 308 (365)
T 4h5i_A 245 IV-LTKISIKSGNTSVLRSKQVTN--RFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK------------- 308 (365)
T ss_dssp EE-EEEEEEETTEEEEEEEEEEES--SCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET-------------
T ss_pred eE-EeecccccceecceeeeeecC--CCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec-------------
Confidence 5 88999877653 234555 77899999999999999999999999999999987543210
Q ss_pred cCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 314 NHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+.+...+..++|+|+ ..|++++.||.|+||.++.
T Consensus 309 ------------------------------------------~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 309 ------------------------------------------QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ------------------------------------------TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred ------------------------------------------CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 112356788999999 6788888899999999976
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-28 Score=233.40 Aligned_cols=226 Identities=12% Similarity=0.064 Sum_probs=177.0
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+-...|.+|+|+|||+++|+++ |++|+ |....+. +.+|...+..+.|+|++ .+ +.+.
T Consensus 10 ~~~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~-----l~gh~~~v~~V~FsPdg-------~~-----~~~~ 70 (588)
T 2j04_A 10 DRKEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD-----INCNSKNLFHVKEFPLE-------FE-----NKLD 70 (588)
T ss_dssp CSCCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC-----CSSBGGGTEEEEEECCC-------CC-----CTTT
T ss_pred cHhHhhccEEEEEECCCCCEEEEEcCCceee--cccccce-----ecCCCccEEEEEECCCC-------Cc-----ceEE
Confidence 3455668899999999999999999 99999 6544322 34788899999999988 33 7777
Q ss_pred EEECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCC---cceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANL---RGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 191 (411)
+|+.+. ..+..+.+...|.+++|+|+|..++ .||.|++||.+. ++..+. |..+ ..+.+++++|++++||+
T Consensus 71 ~~~~~~-~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAs 146 (588)
T 2j04_A 71 FELAQQ-NGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVV 146 (588)
T ss_dssp TSCCCS-SCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEE
T ss_pred EEeCCC-ceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEE
Confidence 776432 2233334678899999999999888 799999999543 555555 4431 24667888888889987
Q ss_pred ecCCCCeEEEEEcCCcc--------eEEE----eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce---EEEEe
Q 015198 192 PGLQRGQVRIEHFGLNM--------IKLI----NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR---LQEVR 256 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~--------~~~~----~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~---~~~~~ 256 (411)
|+.||+|+||+...+. +..+ .+|...|.+++|+|+| |++++.|+. |++||+..++. ..++.
T Consensus 147 -gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 147 -GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp -EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEEE
T ss_pred -EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeeec
Confidence 5689999999988763 4666 5677899999999999 788888999 99999988773 35664
Q ss_pred CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 257 RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 257 ~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
.+ |...|.+++|+ |+.||+++ +++|++||+.+++.
T Consensus 223 ~~-h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 223 NA-SRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CC-CSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred cc-ccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 32 77899999999 68899887 69999999998775
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.8e-25 Score=209.53 Aligned_cols=241 Identities=10% Similarity=0.031 Sum_probs=195.2
Q ss_pred CCCeEEEEEcCCCCEE-EEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEE-EecCCCCCCCCCeEEEEE
Q 015198 44 EIELISVSWNQDYGCF-AAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILAL-VGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~l-a~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~~~d~~i~vwd 120 (411)
...+.+++|+|++++| ++++ ++.|++||+.+.+...... .+ ..+..+.|++++..+ +++..+ +.|++||
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~--~~-~~v~~~~~spdg~~l~~~~~~~-----~~v~v~d 102 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP--AG-SSPQGVAVSPDGKQVYVTNMAS-----STLSVID 102 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE--CS-SSEEEEEECTTSSEEEEEETTT-----TEEEEEE
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE--CC-CCccceEECCCCCEEEEEECCC-----CEEEEEE
Confidence 3458999999999987 5665 9999999998866544443 22 278889999987654 566666 9999999
Q ss_pred CCCCcEEEEEeecCceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 121 DHQSRCIGEFAFRSDVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 121 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
+.+++.+..+.+...+.+++|+|++..++ .++.|++||+.+++.+..+..+.. ...+.+++++..+++++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~dg~~l~~~~~~~ 179 (391)
T 1l0q_A 103 TTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS---PKGIAVTPDGTKVYVANFDS 179 (391)
T ss_dssp TTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS---EEEEEECTTSSEEEEEETTT
T ss_pred CCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC---cceEEECCCCCEEEEEeCCC
Confidence 99999999888878899999999987663 589999999999999888876543 35566677777776667789
Q ss_pred CeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEc---CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCC
Q 015198 197 GQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAS---TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNV 273 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s---~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg 273 (411)
+.|++|+...........+...+.+++|+|+|++|++++ .++. |++||+.+++.+..+.. +. .+.+++|+|++
T Consensus 180 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~--~~-~~~~~~~s~dg 255 (391)
T 1l0q_A 180 MSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPV--GP-DPAGIAVTPDG 255 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEEC--CS-SEEEEEECTTS
T ss_pred CEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEec--CC-CccEEEEccCC
Confidence 999999987665555555677899999999999998887 6888 99999999999888876 32 57899999999
Q ss_pred CEE-EEEeCCCcEEEEEccccccCCCC
Q 015198 274 QWL-AVASDKGTVHIFSLRVRVVGEDS 299 (411)
Q Consensus 274 ~~l-~s~s~dg~I~vwd~~~~~~~~~~ 299 (411)
++| ++++.|+.|++||+.+++....+
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 987 56688999999999998765433
No 115
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=3.9e-27 Score=224.83 Aligned_cols=199 Identities=11% Similarity=0.146 Sum_probs=156.9
Q ss_pred CCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc-----------EEEEEe-ec------------CceeEEE
Q 015198 85 SGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR-----------CIGEFA-FR------------SDVRSVK 140 (411)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~-----------~~~~~~-~~------------~~i~~~~ 140 (411)
.+...|.++.|++++.+|++++.| +.|+|||+.+++ .+..+. |. ..|.+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKG-----GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETT-----SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCC-----CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEE
Confidence 346778999999999999999988 999999988776 466666 76 8899999
Q ss_pred EcCCe--EEEE---EcCeEEEEEcCCceee---------------------------------------EEE-eccCCCc
Q 015198 141 LSRDR--IVVV---LEHKIYVYSFVDLKLL---------------------------------------HQI-ETLANLR 175 (411)
Q Consensus 141 ~~~~~--~~~~---~dg~i~iwd~~~~~~~---------------------------------------~~~-~~~~~~~ 175 (411)
|+|++ ..++ .|+.|++||+.+++.. ..+ ..|...+
T Consensus 101 ~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 101 WLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp ECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred EcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 99997 3444 7999999999764432 122 3455544
Q ss_pred ceEEEccCCCceEEEEecCCCCeEEEEEcC-Cc-ceE-------EEeccccceeEEEecCCC-CEEEEEcCCCeEEEEEE
Q 015198 176 GLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LN-MIK-------LINAHDSHIACFTLTLDG-LLLATASTRGTLIRIFN 245 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~-~~~-------~~~~~~~~i~~l~~sp~g-~~l~s~s~dg~~I~vwd 245 (411)
. ++.+++++.+|++ | .|+.|++|+.. .. .+. .+.+|...|.+++|+|++ ++|++++.|+. |++||
T Consensus 181 ~--~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd 255 (447)
T 3dw8_B 181 N--SISINSDYETYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRLCD 255 (447)
T ss_dssp C--EEEECTTSSEEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEEEE
T ss_pred E--EEEEcCCCCEEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEEEE
Confidence 4 4555556677776 5 69999999987 32 333 245899999999999999 99999999999 99999
Q ss_pred CCCCce----EEEEeCCCCCc------------ceEEEEeCCCCCEEEEEeCCCcEEEEEccc-cccC
Q 015198 246 TVDGTR----LQEVRRGVDRA------------EIYSIALSPNVQWLAVASDKGTVHIFSLRV-RVVG 296 (411)
Q Consensus 246 ~~~~~~----~~~~~~~~~~~------------~v~~l~~spdg~~l~s~s~dg~I~vwd~~~-~~~~ 296 (411)
+++++. +..+.. |.. .|.+++|+|+|++|++++. +.|+|||+++ ++..
T Consensus 256 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~ 320 (447)
T 3dw8_B 256 MRASALCDRHSKLFEE--PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV 320 (447)
T ss_dssp TTTCSSSCTTCEEECC--C-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS
T ss_pred CcCCccccceeeEecc--CCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc
Confidence 999886 677776 544 8999999999999999999 9999999987 5544
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.4e-25 Score=200.77 Aligned_cols=241 Identities=9% Similarity=0.110 Sum_probs=162.5
Q ss_pred CeEEEEEcCCCC---EEEEEeCCcEEEEecCCC---cceEEeecCC-----------------------CCEEEEEEecc
Q 015198 46 ELISVSWNQDYG---CFAAGTSCGFRIYNCEPF---KETFRRDLKS-----------------------GGFRIVEMLFR 96 (411)
Q Consensus 46 ~V~~l~~s~~g~---~la~g~dg~i~iw~~~~~---~~~~~~~~~~-----------------------~~~~~~~~~~~ 96 (411)
.+.++-|-..|- .++++++..|++|+.... ++....+++. +...+..++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 355666654433 677777999999999875 3333333211 12245566777
Q ss_pred CC----eEEEEecCCCC---------------CCCCCeEEEEEC-CCCcEEEEEe-ecCceeEEEEcC---CeEEEE---
Q 015198 97 CN----ILALVGAGDNS---------------QYPPTKVIIWDD-HQSRCIGEFA-FRSDVRSVKLSR---DRIVVV--- 149 (411)
Q Consensus 97 ~~----~~~l~s~~~d~---------------~~~d~~i~vwd~-~~~~~~~~~~-~~~~i~~~~~~~---~~~~~~--- 149 (411)
|+ +..+++++.+. ...++.|++|++ .+|+.+..+. |...+..++|++ ++.+++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS 200 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT 200 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec
Confidence 77 66666544210 012488888887 4477777666 777788888887 566777
Q ss_pred EcCeEEEEEcCCceeeEEEeccCC-CcceEEEccCCCceEEE-----------EecCCCCeEEEEEcCCcc-eEEE----
Q 015198 150 LEHKIYVYSFVDLKLLHQIETLAN-LRGLCCLSHHSSTSVLA-----------CPGLQRGQVRIEHFGLNM-IKLI---- 212 (411)
Q Consensus 150 ~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~-----------~~g~~dg~i~i~~~~~~~-~~~~---- 212 (411)
.|++|++||++++++++.+..+.. ...+.+.+++|++.+++ .+|+.|++|++|+..... +..+
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 699999999999999999986543 22344444555666652 467899999999876544 3332
Q ss_pred -eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcce-EEEEeCCCCCEEEEEeCCCcEEEEEc
Q 015198 213 -NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEI-YSIALSPNVQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 213 -~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v-~~l~~spdg~~l~s~s~dg~I~vwd~ 290 (411)
.+|...+.+..+ ++.++++++.|++ |+|||+.+++++.++.+ |...+ ..++|+|||++|++|+.|++|+|||+
T Consensus 281 p~Gh~~~~lsg~~--sg~~lASgS~DgT-IkIWDl~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 281 PPGQAGRFLEGDV--KDHCAAAILTSGT-IAIWDLLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CTTCCCCEEEEEE--ETTEEEEEETTSC-EEEEETTTCSEEEEECC--C--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred cCCCcceeEcccc--CCCEEEEEcCCCc-EEEEECCCCcEEEEecC--CCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 256555544444 4789999999999 99999999999999987 55544 46899999999999999999999996
Q ss_pred c
Q 015198 291 R 291 (411)
Q Consensus 291 ~ 291 (411)
.
T Consensus 356 ~ 356 (356)
T 2w18_A 356 S 356 (356)
T ss_dssp C
T ss_pred C
Confidence 3
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=5e-26 Score=213.86 Aligned_cols=228 Identities=11% Similarity=0.036 Sum_probs=141.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEE---eecCCCCEEEEEEeccC--------CeEEEEecCCCC
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFR---RDLKSGGFRIVEMLFRC--------NILALVGAGDNS 109 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~l~s~~~d~ 109 (411)
.|...+....+.+++.+|++++ |++|+|||.+....... ..+.+|...|.++.|+| ++.+|++++.|
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D- 165 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD- 165 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT-
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC-
Confidence 3444444555556677899999 99999999987544322 23567888999999987 78999999998
Q ss_pred CCCCCeEEEEECCCCcEEEEE-eecCceeEEEEcCCeE-EEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCC
Q 015198 110 QYPPTKVIIWDDHQSRCIGEF-AFRSDVRSVKLSRDRI-VVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHS 184 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~-~~~~~i~~~~~~~~~~-~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (411)
++|+|||+.++..+..+ .|...+.+++|+|++. +++ .|+.|++||+++++.......+........+.+.
T Consensus 166 ----~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~- 240 (393)
T 4gq1_A 166 ----CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLN- 240 (393)
T ss_dssp ----SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEE-
T ss_pred ----CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecc-
Confidence 99999999887766555 4899999999999875 454 6999999999988766554333221111111111
Q ss_pred CceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEec-CCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcc
Q 015198 185 STSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLT-LDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAE 263 (411)
Q Consensus 185 ~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~s-p~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~ 263 (411)
...........+|...+.++.|+ ++|+.|++++.|+. +++||+.+++....+.. +...
T Consensus 241 ------------------~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~--~~~~ 299 (393)
T 4gq1_A 241 ------------------TLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGA-WLRWNLFANNDYNEISD--STMK 299 (393)
T ss_dssp ------------------SGGGC------CCSSSCSEEEEETTTTCEEEEECTTSE-EEEEEC-----------------
T ss_pred ------------------cccceeeeecccccccceeeeeecCCCCEEEEEeCCCC-EEEEECccCCCCceEee--ecCc
Confidence 11111122235788899999986 89999999999999 99999988876666554 3333
Q ss_pred eEEEEe------------------CC--CCCEEEEEeCCCcEEEEEccccccC
Q 015198 264 IYSIAL------------------SP--NVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 264 v~~l~~------------------sp--dg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+..+.+ +| ++.++++|+.||.|+|||+.+++..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 333333 22 3446778889999999999988654
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=3.7e-25 Score=210.31 Aligned_cols=239 Identities=10% Similarity=0.075 Sum_probs=193.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEE-EecCCCCCCCCCeEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILAL-VGAGDNSQYPPTKVI 117 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~~~d~~i~ 117 (411)
..+|.+.|.+++|+++++++++++ |+.|++||+++.+...... .+...+..+.|++++..+ +++..+ +.|+
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~ 237 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD--LTGKWSKILLYDPIRDLVYCSNWIS-----EDIS 237 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE--CSSSSEEEEEEETTTTEEEEEETTT-----TEEE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc--CCCCCeeEEEEcCCCCEEEEEecCC-----CcEE
Confidence 347889999999999999999999 9999999998765544433 566677888899877544 566566 9999
Q ss_pred EEECCCCcEEEEEeecCceeEEEEcCCeEEEE--E---------cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc
Q 015198 118 IWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--L---------EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST 186 (411)
Q Consensus 118 vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (411)
+||+.+++.+..+.....+.+++|+|++..++ . |+.|++||+.+++.+..+.... ....+.+++++
T Consensus 238 ~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~g 314 (433)
T 3bws_A 238 VIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---NKRHIVSGNTE 314 (433)
T ss_dssp EEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---CEEEEEECSST
T ss_pred EEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---CcceEEECCCC
Confidence 99999999988888777899999999997665 2 6799999999998877764322 34455666777
Q ss_pred eEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcC---------------CCeEEEEEECCCCce
Q 015198 187 SVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAST---------------RGTLIRIFNTVDGTR 251 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~---------------dg~~I~vwd~~~~~~ 251 (411)
..++++++.++.|++|+...........+...+.+++|+|+|++|++++. ||. |++||+.+++.
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~ 393 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTV 393 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEE
T ss_pred CEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcE
Confidence 66666677899999999876544444457788999999999998888776 468 99999999999
Q ss_pred EEEEeCCCCCcceEEEEeCCCCCEEEEEeC-CCcEEEEEccc
Q 015198 252 LQEVRRGVDRAEIYSIALSPNVQWLAVASD-KGTVHIFSLRV 292 (411)
Q Consensus 252 ~~~~~~~~~~~~v~~l~~spdg~~l~s~s~-dg~I~vwd~~~ 292 (411)
+..+.. ...+.+++|+|+|++|++++. |+.|++|+++.
T Consensus 394 ~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 394 KEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 888875 347899999999999988875 99999999863
No 119
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=7.4e-27 Score=237.39 Aligned_cols=247 Identities=12% Similarity=0.104 Sum_probs=193.2
Q ss_pred cCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC--CCcEEEEEe-ecCceeEEEEcCC--eEEEE---EcCeE
Q 015198 83 LKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH--QSRCIGEFA-FRSDVRSVKLSRD--RIVVV---LEHKI 154 (411)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~--~~~~~~~~~-~~~~i~~~~~~~~--~~~~~---~dg~i 154 (411)
+.+|...+.++.|++++..+++++.| |.|++||+. +++.+..+. |...|.+++|+++ +.+++ .||.|
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred cccCcceeEEEEECCCCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 45788899999999999999999888 999999987 446666666 8999999999987 77666 69999
Q ss_pred EEEEcCCce--eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc---ceEEEeccccceeEEEecC---
Q 015198 155 YVYSFVDLK--LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN---MIKLINAHDSHIACFTLTL--- 226 (411)
Q Consensus 155 ~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~l~~sp--- 226 (411)
++||+.+++ .+..+..|...+..++++++.++..+++ |+.||.|++|+.... ....+.+|...|.+++|+|
T Consensus 80 ~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 80 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 999999886 6666677777555555555422667765 668999999998654 4566788999999999999
Q ss_pred ----------CCCEEEEEcCCCeEEEEEECCCC----ceEEEEeCCCCCcceEEEEeCCC---CCEEEEEeCCCcEEEEE
Q 015198 227 ----------DGLLLATASTRGTLIRIFNTVDG----TRLQEVRRGVDRAEIYSIALSPN---VQWLAVASDKGTVHIFS 289 (411)
Q Consensus 227 ----------~g~~l~s~s~dg~~I~vwd~~~~----~~~~~~~~~~~~~~v~~l~~spd---g~~l~s~s~dg~I~vwd 289 (411)
++.+|++|+.||. |++||++++ .....+.. |...|.+++|+|+ +++|++++.||.|++||
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~~--h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLEG--HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp --------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEECC--CSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred ccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeecC--CCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 5899999999999 999999887 44555666 8889999999999 89999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEcc
Q 015198 290 LRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS 369 (411)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (411)
+.+++........ ......+.+..++|++
T Consensus 236 ~~~~~~~~~~~~~---------------------------------------------------~~~~~~~~v~~l~~sp 264 (753)
T 3jro_A 236 QDNEQGPWKKTLL---------------------------------------------------KEEKFPDVLWRASWSL 264 (753)
T ss_dssp ESSSSSCCBCCBS---------------------------------------------------SSSCCSSCCCCEEECT
T ss_pred CCCCCCcceeEEe---------------------------------------------------ccCCCCCceEEEEEcC
Confidence 9987532100000 0000113445678999
Q ss_pred C-CEEEEEEeCCcEEEEEEec
Q 015198 370 Q-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 370 ~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+ ..|++++.||.|++|++..
T Consensus 265 dg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 265 SGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp TTCCEEEECSSSCEECCBCCS
T ss_pred CCCEEEEEcCCCEEEEEecCC
Confidence 8 6788888899999999884
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.2e-25 Score=203.01 Aligned_cols=192 Identities=18% Similarity=0.211 Sum_probs=149.4
Q ss_pred EEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcC--------
Q 015198 91 VEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFV-------- 160 (411)
Q Consensus 91 ~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~-------- 160 (411)
....+..++..+++++.| +.|++||+.+++.+..+. ...|.++.++|+ ++. .|+.|++|+..
T Consensus 40 ~~~~~~~d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~--~~s~s~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 40 LNKSMYYDKWVCMCRCED-----GALHFTQLKDSKTITTIT-TPNPRTGGEHPA--IISRGPCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp ECSSSSEEEEEEEEEEET-----TEEEEEEESSSSCEEEEE-EECCCTTCCCCS--EEEECSTTEEEEEETTTEEEEEET
T ss_pred hhhhhcCCCCEEEEECCC-----CcEEEEECCCCcEEEEEe-cCCceeeeeCCc--eEEecCCCeEEEEEccCceEEeec
Confidence 334455678889999988 999999999999888877 456777788888 333 68888888654
Q ss_pred -CceeeEEEe-ccCCCcceEEEccCC--CceEEEEecCCCCeEEEEEcCCcce-EEE-eccccceeEEEecCCCCEEEEE
Q 015198 161 -DLKLLHQIE-TLANLRGLCCLSHHS--STSVLACPGLQRGQVRIEHFGLNMI-KLI-NAHDSHIACFTLTLDGLLLATA 234 (411)
Q Consensus 161 -~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~l~~~g~~dg~i~i~~~~~~~~-~~~-~~~~~~i~~l~~sp~g~~l~s~ 234 (411)
+++.+..+. .|.. .+.++.+++ ++.++++ |+.||.|++|+...... ... ..|...|.+++|+|+|.+|++|
T Consensus 112 ~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~s-~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 112 KTNKVLREIEVDSAN--EIIYMYGHNEVNTEYFIW-ADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp TTCCEEEEEECCCSS--CEEEEECCC---CCEEEE-EETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred CCcceeEEeecCCCC--CEEEEEcCCCCCCCEEEE-EeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 555455554 3333 456666666 7778775 56899999999876544 333 2456689999999999999999
Q ss_pred cCCCeEEEEEECCCCceE-EEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 235 STRGTLIRIFNTVDGTRL-QEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 235 s~dg~~I~vwd~~~~~~~-~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+.|+. |++||+++++.+ ..+... |...|.+++|+|++.+|++++ |+.|++||+++++..
T Consensus 189 ~~dg~-i~iwd~~~~~~~~~~~~~~-h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 189 SPDGI-LDVYNLSSPDQASSRFPVD-EEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp CTTSC-EEEEESSCTTSCCEECCCC-TTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred cCCCE-EEEEECCCCCCCccEEecc-CCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 99999 999999999877 666652 678999999999999999999 459999999988654
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=2.8e-24 Score=195.29 Aligned_cols=229 Identities=13% Similarity=0.180 Sum_probs=174.6
Q ss_pred EEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceee
Q 015198 92 EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLL 165 (411)
Q Consensus 92 ~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~ 165 (411)
.+.|++++. |+.+. | ++|+|||+.++++++.+. |...|.+++|+|++.+++ .|+.|++||+++++.+
T Consensus 30 ~l~WS~~~~-lAvg~-D-----~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 30 LVDWSSGNV-LAVAL-D-----NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp CEEECTTSE-EEEEE-T-----TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEECCCCE-EEEEe-C-----CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeE
Confidence 467888874 44443 4 999999999999998886 567899999999999888 6999999999999999
Q ss_pred EEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC--cceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEE
Q 015198 166 HQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL--NMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRI 243 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~v 243 (411)
..+..|.. .+.++++.+ ..++ +|+.++.+++|.... ..+..+.+|...+..+.+++++++|++++.|+. |++
T Consensus 103 ~~~~~h~~--~~~~~~~~~--~~l~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~-i~i 176 (318)
T 4ggc_A 103 RNMTSHSA--RVGSLSWNS--YILS-SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNL-VNV 176 (318)
T ss_dssp EEEECCSS--CEEEEEEET--TEEE-EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC-EEE
T ss_pred EEecCccc--eEEEeecCC--CEEE-EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcc-eeE
Confidence 99988876 445555554 3455 467899999977654 456677899999999999999999999999999 999
Q ss_pred EECCCCceE----EEEeC------------------------------------------CCCCcceEEEEeCCCCCEEE
Q 015198 244 FNTVDGTRL----QEVRR------------------------------------------GVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 244 wd~~~~~~~----~~~~~------------------------------------------~~~~~~v~~l~~spdg~~l~ 277 (411)
||+++++.. ..... ..+...+..+.|++++..++
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 256 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELI 256 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEE
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceE
Confidence 998764311 11111 00223456677777777766
Q ss_pred EEe--CCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEE
Q 015198 278 VAS--DKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQF 355 (411)
Q Consensus 278 s~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (411)
+++ .|+.|+|||+++++... ++
T Consensus 257 ~~sg~~d~~i~iwd~~~~~~~~--------------------------------------------------------~l 280 (318)
T 4ggc_A 257 SGHGFAQNQLVIWKYPTMAKVA--------------------------------------------------------EL 280 (318)
T ss_dssp EEECTTTCCEEEEETTTCCEEE--------------------------------------------------------EE
T ss_pred EEEEcCCCEEEEEECCCCcEEE--------------------------------------------------------EE
Confidence 554 67888888887776543 33
Q ss_pred EeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 356 HIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 356 ~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
+-+.+.+..++|+++ ..|++++.||.|++|++.+
T Consensus 281 ~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 281 KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 334456778899998 6788899999999998865
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-25 Score=212.24 Aligned_cols=241 Identities=8% Similarity=0.007 Sum_probs=186.2
Q ss_pred cCCCCCCeEEEEEcCCCCEE-EEEe-CCcEEEEecC--CCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 40 SDVDEIELISVSWNQDYGCF-AAGT-SCGFRIYNCE--PFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~l-a~g~-dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
..+|.+.|++++|+|++++| ++|+ |+.|+||++. +.+.......+.+...+.++.|+|++..+++++.+ +.
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-----g~ 172 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF-----GD 172 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SE
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC-----Cc
Confidence 35788899999999999996 7888 9999999998 55444333223556778899999999888888887 99
Q ss_pred EEEEECCCCcEEE----EEe-ecCceeEEEEcCC---eEEEE---EcCeEEEEEcCCceeeEEE-eccCCCcceEEEccC
Q 015198 116 VIIWDDHQSRCIG----EFA-FRSDVRSVKLSRD---RIVVV---LEHKIYVYSFVDLKLLHQI-ETLANLRGLCCLSHH 183 (411)
Q Consensus 116 i~vwd~~~~~~~~----~~~-~~~~i~~~~~~~~---~~~~~---~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~ 183 (411)
|++|++.+++... .+. |...|.+++|+|+ +.+++ .|+.|++||+.+++.+..+ ..|...+..++++
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-- 250 (450)
T 2vdu_B 173 VYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-- 250 (450)
T ss_dssp EEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--
T ss_pred EEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--
Confidence 9999988876543 444 8899999999999 87777 6899999999998888774 4676655555544
Q ss_pred CCceEEEEecCCCCeEEEEEcCC-cceEEEec-------------------------cccceeEEEecCCCCEEEEEc-C
Q 015198 184 SSTSVLACPGLQRGQVRIEHFGL-NMIKLINA-------------------------HDSHIACFTLTLDGLLLATAS-T 236 (411)
Q Consensus 184 ~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~-------------------------~~~~i~~l~~sp~g~~l~s~s-~ 236 (411)
++.+|++ |+.|+.|++|+... +.+..+.. ....|..++|+|++++|++++ .
T Consensus 251 -d~~~l~s-~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~ 328 (450)
T 2vdu_B 251 -KDYLLLS-AGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEA 328 (450)
T ss_dssp -STTEEEE-EESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETT
T ss_pred -CCCEEEE-EeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECC
Confidence 6677775 56899999999764 44555553 235688999999999999998 8
Q ss_pred CCeEEEEEEC--CCC---ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeC------CCcEEEEEcccc
Q 015198 237 RGTLIRIFNT--VDG---TRLQEVRRGVDRAEIYSIALSPNVQWLAVASD------KGTVHIFSLRVR 293 (411)
Q Consensus 237 dg~~I~vwd~--~~~---~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~------dg~I~vwd~~~~ 293 (411)
++. |++||+ .++ +.+..+.. + ..|.+++|+|++.++++++. +..|.+|.++..
T Consensus 329 d~~-i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 329 TKC-IIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp CSE-EEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred CCe-EEEEEeccCCCCceeeccEecc--C-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcC
Confidence 898 999999 565 56667776 4 68999999996544444343 456899988654
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-25 Score=212.91 Aligned_cols=224 Identities=8% Similarity=-0.015 Sum_probs=176.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
...+|...|++++|+|+| .++.+.+|+.+. .....+ .+...+.++.|+|++..+++++.| |.|++
T Consensus 47 ~l~gh~~~v~~V~FsPdg------~~~~~~~~~~~~---~~~~~~-~~~~~V~~vawSPdG~~LAs~s~d-----g~V~i 111 (588)
T 2j04_A 47 DINCNSKNLFHVKEFPLE------FENKLDFELAQQ---NGLLNS-QPVCYPRVCKPSPIDDWMAVLSNN-----GNVSV 111 (588)
T ss_dssp CCSSBGGGTEEEEEECCC------CCCTTTTSCCCS---SCSSTT-SCSCCEEEEEECSSSSCEEEEETT-----SCEEE
T ss_pred eecCCCccEEEEEECCCC------CcceEEEEeCCC---ceEeec-CCCCcEEEEEECCCCCEEEEEeCC-----CcEEE
Confidence 347899999999999999 456555555432 222223 447789999999999999999988 99999
Q ss_pred EECCCCcEEEEEeecC-----ceeEEEEcCCeEEEE---EcCeEEEEEcCCcee-------eEEEe----ccCCCcceEE
Q 015198 119 WDDHQSRCIGEFAFRS-----DVRSVKLSRDRIVVV---LEHKIYVYSFVDLKL-------LHQIE----TLANLRGLCC 179 (411)
Q Consensus 119 wd~~~~~~~~~~~~~~-----~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~-------~~~~~----~~~~~~~~~~ 179 (411)
||... ++..+.|.. .+.+++|+|||++++ .||+|++||+.+++. +..+. +|.. .+.+
T Consensus 112 wd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~--~V~s 187 (588)
T 2j04_A 112 FKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKD--WVTH 187 (588)
T ss_dssp EETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCC--CEEE
T ss_pred EeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccc--cEEE
Confidence 99544 555555443 499999999999999 699999999988753 56663 3334 5666
Q ss_pred EccCCCceEEEEecCCCCeEEEEEcCCcce----EEE-eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEE
Q 015198 180 LSHHSSTSVLACPGLQRGQVRIEHFGLNMI----KLI-NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQE 254 (411)
Q Consensus 180 ~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~----~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~ 254 (411)
++++|++ +++ ++.|+.|++|+..+... ..+ .+|...|.+++|+ |+.||+++ ++. |++||+.+++....
T Consensus 188 VawSPdg--Laa-ss~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~t-IkLWd~~~~~~~~~ 260 (588)
T 2j04_A 188 IVWYEDV--LVA-ALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGY-VHKIDLKNYSISSL 260 (588)
T ss_dssp EEEETTE--EEE-EETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSE-EEEEETTTTEEEEE
T ss_pred EEEcCCc--EEE-EeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCe-EEEEECCCCeEEEE
Confidence 7777777 444 44799999999877653 346 4788999999999 68999988 688 99999987776433
Q ss_pred EeCCCCCcceEEEEe--CCCCCEEEEEeCCCcEEEEEcc
Q 015198 255 VRRGVDRAEIYSIAL--SPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 255 ~~~~~~~~~v~~l~~--spdg~~l~s~s~dg~I~vwd~~ 291 (411)
..+ |.+.|..++| +||+..|+++.+||+ ++|.++
T Consensus 261 ~~g--h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 261 KTG--SLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp ECS--CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EcC--CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 334 8889999999 999999999999999 999987
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.6e-23 Score=187.49 Aligned_cols=234 Identities=12% Similarity=0.139 Sum_probs=162.9
Q ss_pred EEEEEeccCC---eEEEEecCCCCCCCCCeEEEEECCCC---cEEEEEe-ecC-------------------------ce
Q 015198 89 RIVEMLFRCN---ILALVGAGDNSQYPPTKVIIWDDHQS---RCIGEFA-FRS-------------------------DV 136 (411)
Q Consensus 89 ~~~~~~~~~~---~~~l~s~~~d~~~~d~~i~vwd~~~~---~~~~~~~-~~~-------------------------~i 136 (411)
.+..+.|-.. ...++++++ ..|++|+..++ +.++++. +.. .|
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~------~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v 114 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACE------DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREI 114 (356)
T ss_dssp EEEEEEEC----CEEEEEEEES------SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred EEeeeeeccCCCCccEEEEecc------ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccce
Confidence 3444545433 346677666 89999998888 6677666 332 56
Q ss_pred eEEEEcCC----eEEEEE-----------------------cCeEEEEEc-CCceeeEEEeccCCCcceEEEcc-CCCce
Q 015198 137 RSVKLSRD----RIVVVL-----------------------EHKIYVYSF-VDLKLLHQIETLANLRGLCCLSH-HSSTS 187 (411)
Q Consensus 137 ~~~~~~~~----~~~~~~-----------------------dg~i~iwd~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 187 (411)
.+++++|+ ++.++. |+.|++|++ .+++.+..+..|...+.+++|++ .+++.
T Consensus 115 ~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~ 194 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQE 194 (356)
T ss_dssp EEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTT
T ss_pred EEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCc
Confidence 67777777 555551 677778887 44777777777777777788887 55666
Q ss_pred EEEEecCCCCeEEEEEcC-CcceEEEecccc---ceeEEEecCCCCEE------------EEEcCCCeEEEEEECCCCce
Q 015198 188 VLACPGLQRGQVRIEHFG-LNMIKLINAHDS---HIACFTLTLDGLLL------------ATASTRGTLIRIFNTVDGTR 251 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~~---~i~~l~~sp~g~~l------------~s~s~dg~~I~vwd~~~~~~ 251 (411)
.|++ |+.|++|+||+.. ++.++.+.+|.. .+.+++|+|+|+++ ++|+.|++ |++||..+++.
T Consensus 195 ~LaS-gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~ 272 (356)
T 2w18_A 195 ALLG-TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLS 272 (356)
T ss_dssp EEEE-EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEE
T ss_pred eEEE-ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEE
Confidence 7765 6799999999987 567888886543 57778999999876 56788899 99999999998
Q ss_pred EEEEe---CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCC
Q 015198 252 LQEVR---RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTG 328 (411)
Q Consensus 252 ~~~~~---~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (411)
+..+. ...|...+.+..++ +.++++++.|++|+|||+.+++...++..|.
T Consensus 273 l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~------------------------- 325 (356)
T 2w18_A 273 VGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVS------------------------- 325 (356)
T ss_dssp EEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--------------------------
T ss_pred EEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCC-------------------------
Confidence 77653 11144445444444 7899999999999999999998765333331
Q ss_pred CCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEE
Q 015198 329 ANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSF 387 (411)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~ 387 (411)
......++|+|+ ..|++++.||.|++|++
T Consensus 326 ------------------------------~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 ------------------------------DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -------------------------------CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ------------------------------CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 123345799998 66888888999999986
No 125
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=3.4e-23 Score=191.81 Aligned_cols=242 Identities=12% Similarity=0.075 Sum_probs=172.0
Q ss_pred EEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEE
Q 015198 69 IYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVV 148 (411)
Q Consensus 69 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 148 (411)
||++.+...+. .+..|...+.++.|++++.++++++. ..+++||+.+++.+....+. .+..+.+.+++..+
T Consensus 3 i~s~~~~~~~~--~~~~h~~~V~~v~fs~dg~~la~g~~------~~~~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 73 (355)
T 3vu4_A 3 LGSMITRNPIV--PENHVSNPVTDYEFNQDQSCLILSTL------KSFEIYNVHPVAHIMSQEMR-HLSKVRMLHRTNYV 73 (355)
T ss_dssp ------------------CCCCCEEEECTTSSEEEEECS------SEEEEEEETTEEEEEEEECS-CCCEEEECTTSSEE
T ss_pred cccccccCCcc--ccccCCCceEEEEECCCCCEEEEEcC------CEEEEEecCCcceeeeeecC-CeEEEEEcCCCCEE
Confidence 45555433222 23367788999999999999999887 45789998887766655443 47777877766555
Q ss_pred E----EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc--ceEEEeccccceeEE
Q 015198 149 V----LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN--MIKLINAHDSHIACF 222 (411)
Q Consensus 149 ~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~~~~~~~~~~i~~l 222 (411)
+ .|+.|++||+.+++.+..+..+ . .+.++.++++. ++++ .++.|++|+.... .+..+.. +...+
T Consensus 74 ~~~~~~d~~v~iWd~~~~~~~~~~~~~-~--~v~~v~~~~~~--~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~ 143 (355)
T 3vu4_A 74 AFVTGVKEVVHIWDDVKKQDVSRIKVD-A--PVKDLFLSREF--IVVS--YGDVISVFKFGNPWKRITDDIR---FGGVC 143 (355)
T ss_dssp EEECSSTTEEEEEETTTTEEEEEEECS-S--CEEEEEECSSE--EEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEE
T ss_pred EEEECCccEEEEEECCCCcEEEEEECC-C--ceEEEEEcCCE--EEEE--EcCEEEEEECCCCceeeEEecc---CCceE
Confidence 3 5789999999999999888743 3 45666666654 3332 4789999987754 4444443 44456
Q ss_pred EecCCCCEEEE--EcCCCeEEEEEECCCCc----------------eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc
Q 015198 223 TLTLDGLLLAT--ASTRGTLIRIFNTVDGT----------------RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 223 ~~sp~g~~l~s--~s~dg~~I~vwd~~~~~----------------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
++++ .+++. |+.+|. |++||+.+++ .+..+.+ |...|.+++|+|+|++|++++.|++
T Consensus 144 ~~s~--~~la~~sg~~~g~-v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~--h~~~v~~~~~s~~g~~l~s~s~d~~ 218 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQ-IHITKLQSSGSATTQDQGVQQKAILGKGVLIKA--HTNPIKMVRLNRKSDMVATCSQDGT 218 (355)
T ss_dssp EEET--TEEEEEESSCTTC-EEEEECCC------------------CCEEECC--CSSCEEEEEECTTSSEEEEEETTCS
T ss_pred EEEc--cEEEEeCCCcCcE-EEEEECCCCCccccccccccccccCcccEEEEc--cCCceEEEEECCCCCEEEEEeCCCC
Confidence 6677 56666 588999 9999998865 2567777 8899999999999999999999999
Q ss_pred -EEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEe--CCCc
Q 015198 285 -VHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHI--PEVT 361 (411)
Q Consensus 285 -I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 361 (411)
|+|||+++++... ++.. +...
T Consensus 219 ~v~iwd~~~~~~~~--------------------------------------------------------~~~~g~h~~~ 242 (355)
T 3vu4_A 219 IIRVFKTEDGVLVR--------------------------------------------------------EFRRGLDRAD 242 (355)
T ss_dssp EEEEEETTTCCEEE--------------------------------------------------------EEECTTCCSC
T ss_pred EEEEEECCCCcEEE--------------------------------------------------------EEEcCCCCCc
Confidence 9999999887542 3331 3356
Q ss_pred eEEEEEccC-CEEEEEEeCCcEEEEEEecC
Q 015198 362 HFIAAFGSQ-NTVVIVSMDGSFYRCSFDPV 390 (411)
Q Consensus 362 ~~~~~~~~~-~~~~~~~~dg~~~~~~~~~~ 390 (411)
+..++|+++ ..|++++.||.+++|++...
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 778999998 77888888999999999764
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=2e-23 Score=197.45 Aligned_cols=245 Identities=13% Similarity=0.086 Sum_probs=174.8
Q ss_pred CCCCeEEEEEcCCCC-EEEEEe-----CC----cEEEEec--CCCcceEEeecCCCCEEEEEEecc--------------
Q 015198 43 DEIELISVSWNQDYG-CFAAGT-----SC----GFRIYNC--EPFKETFRRDLKSGGFRIVEMLFR-------------- 96 (411)
Q Consensus 43 h~~~V~~l~~s~~g~-~la~g~-----dg----~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~-------------- 96 (411)
+...|....|.+.|. ++++|+ +| .|+|||+ .+.+.+....+..+...+..+.+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~ 140 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 140 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCC
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCC
Confidence 345788899998875 555665 46 8999999 776655444443444433333333
Q ss_pred --CCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---Ec---CeEEEEEcCCceeeEEE
Q 015198 97 --CNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LE---HKIYVYSFVDLKLLHQI 168 (411)
Q Consensus 97 --~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d---g~i~iwd~~~~~~~~~~ 168 (411)
....++++.... ....+.|++||+..+.......|...+.+++|+|+++.++ .+ ..|++||+.+++.. .+
T Consensus 141 ~~~~~l~~~s~~~~-~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l 218 (415)
T 2hqs_A 141 AFRTRIAYVVQTNG-GQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QV 218 (415)
T ss_dssp CTTCEEEEEEECSS-SSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EE
T ss_pred cCCCEEEEEEecCC-CCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Ee
Confidence 222333333211 0011699999987555444444889999999999998887 34 49999999988775 44
Q ss_pred eccCCCcceEEEccCCCceEEEEecCCCCe--EEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCC-C--eEEEE
Q 015198 169 ETLANLRGLCCLSHHSSTSVLACPGLQRGQ--VRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTR-G--TLIRI 243 (411)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~--i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~d-g--~~I~v 243 (411)
..+.. .+.++.++|++..|+++++.++. |++|+........+..|...+.+++|+|||++|++++.+ + . |++
T Consensus 219 ~~~~~--~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~-i~~ 295 (415)
T 2hqs_A 219 ASFPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQ-VYK 295 (415)
T ss_dssp ECCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCE-EEE
T ss_pred ecCCC--cccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcE-EEE
Confidence 44444 45667777788888866666554 778888777777888888999999999999988887764 4 5 888
Q ss_pred EECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC---CcEEEEEcccccc
Q 015198 244 FNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK---GTVHIFSLRVRVV 295 (411)
Q Consensus 244 wd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d---g~I~vwd~~~~~~ 295 (411)
||+.+++.. .+.. +...+.+++|+|||++|++++.+ ..|++||+.+++.
T Consensus 296 ~d~~~~~~~-~l~~--~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 296 VNINGGAPQ-RITW--EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EETTSSCCE-ECCC--SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EECCCCCEE-EEec--CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 899887743 3433 55688999999999999988764 5799999998764
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=1.2e-23 Score=197.52 Aligned_cols=218 Identities=13% Similarity=0.046 Sum_probs=147.4
Q ss_pred ccCCCCCCeEEEEEcC--------CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCe-EEEEecCCC
Q 015198 39 FSDVDEIELISVSWNQ--------DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNI-LALVGAGDN 108 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~--------~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d 108 (411)
.+.+|.+.|++|+|+| |+++||+|+ |++|+|||+.+........ .+...+.++.|+|++ ..+++++.|
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~d 208 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY--PLSSPGISVQFRPSNPNQLIVGERN 208 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE--ECSSCEEEEEEETTEEEEEEEEETT
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec--CCCCCcEEEEECCCCCceEEecCCC
Confidence 4679999999999998 889999999 9999999998755544432 677788899999987 578888888
Q ss_pred CCCCCCeEEEEECCCCcEEEEEe--------------------------ecCceeEEEEc-CCeEEEE---EcCeEEEEE
Q 015198 109 SQYPPTKVIIWDDHQSRCIGEFA--------------------------FRSDVRSVKLS-RDRIVVV---LEHKIYVYS 158 (411)
Q Consensus 109 ~~~~d~~i~vwd~~~~~~~~~~~--------------------------~~~~i~~~~~~-~~~~~~~---~dg~i~iwd 158 (411)
+.|++||+.+++...... |...+.++.|. +++..++ .|+.+++||
T Consensus 209 -----~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd 283 (393)
T 4gq1_A 209 -----GNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWN 283 (393)
T ss_dssp -----SEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEE
T ss_pred -----CEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEE
Confidence 999999998876544332 34567777775 6777666 688888898
Q ss_pred cCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecC-CCCEEEEEcCC
Q 015198 159 FVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTL-DGLLLATASTR 237 (411)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp-~g~~l~s~s~d 237 (411)
+..++....+..+...+... ...++... ...+...+..+.+.+ ++.++++|+.|
T Consensus 284 ~~~~~~~~~l~~~~~~~~~~--~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 284 LFANNDYNEISDSTMKLGPK--NLLPNVQG-----------------------ISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp C---------------------CCSCSEEE-----------------------ECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred CccCCCCceEeeecCccccE--EEcccccc-----------------------ccccCcceeEEEccCCCCEEEEEECCC
Confidence 87776666555444322222 22222111 111222223333333 44567788999
Q ss_pred CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 238 GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 238 g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
|. |++||+.+++.+..+.. |..+|.+++|+|||++||+++.+| +.+|++..
T Consensus 339 g~-V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 339 GL-IQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TE-EEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEEESSE-EEEEEEGG
T ss_pred CE-EEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEeC
Confidence 99 99999999998877777 777999999999999999999887 77777653
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=1.4e-21 Score=184.66 Aligned_cols=226 Identities=15% Similarity=0.094 Sum_probs=170.2
Q ss_pred CCEEEEEe-C------CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEE
Q 015198 56 YGCFAAGT-S------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIG 128 (411)
Q Consensus 56 g~~la~g~-d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~ 128 (411)
+..++.++ + +.|++||++... ... +..+...+..+.|+|++..++.++.+. .+..|++||+.+++...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~--l~~~~~~v~~~~~Spdg~~la~~s~~~--~~~~i~~~d~~tg~~~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN-QFV--VHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS-CEE--EEEESSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTTCCEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC-CEE--EeCCCCcceeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCcEEE
Confidence 55666655 4 689999998533 222 225566788999999998887776540 11499999999998876
Q ss_pred EEeecCceeEEEEcCCeEEEE--E----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCC--eEE
Q 015198 129 EFAFRSDVRSVKLSRDRIVVV--L----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRG--QVR 200 (411)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~--~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg--~i~ 200 (411)
...+...+.+++|+||++.++ . +..|++||+.+++. ..+..+.. .+..+.++|++..|++++..++ .|+
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~--~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS--NNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS--CEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC--cccceEECCCCCEEEEEECCCCCcEEE
Confidence 555888999999999998666 2 34599999988765 44544444 4566677778888887665566 566
Q ss_pred EEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCC---CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEE
Q 015198 201 IEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTR---GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 201 i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~d---g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 277 (411)
+|+........+..+...+..++|+|+|++|++++.+ .. |++||+.+++.. .+.. +. .+.+++|+|||++|+
T Consensus 295 ~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~-i~~~d~~~~~~~-~l~~--~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH-IAKQDLATGGVQ-VLSS--TF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp EEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE-EEEEETTTCCEE-ECCC--SS-SCEEEEECTTSSEEE
T ss_pred EEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE-EEEEECCCCCEE-EecC--CC-CcCCeEEcCCCCEEE
Confidence 6777766666667778889999999999999888764 46 999999988774 4443 33 799999999999999
Q ss_pred EEeCCC---cEEEEEccccc
Q 015198 278 VASDKG---TVHIFSLRVRV 294 (411)
Q Consensus 278 s~s~dg---~I~vwd~~~~~ 294 (411)
+++.++ .|++||+..+.
T Consensus 370 ~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEEETTEEEEEEEETTSCC
T ss_pred EEEcCCCccEEEEEECCCCc
Confidence 888877 79999987443
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=2.6e-21 Score=188.72 Aligned_cols=232 Identities=9% Similarity=0.043 Sum_probs=176.4
Q ss_pred EEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC--CCCcEE
Q 015198 51 SWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD--HQSRCI 127 (411)
Q Consensus 51 ~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~--~~~~~~ 127 (411)
+|+|++.+++++. ++.|.+||..+.+.+..... ++. +..+.++|++.++++++.+ +.|.+||+ .+++.+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-g~~--~~~v~~spdg~~l~v~~~d-----~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-GYA--VHISRMSASGRYLLVIGRD-----ARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-STT--EEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec-Ccc--cceEEECCCCCEEEEECCC-----CeEEEEECcCCCCcEE
Confidence 3789998888888 99999999998665544432 233 6678899999988888887 99999999 889999
Q ss_pred EEEeecCceeEEEEcC----CeEEEE----EcCeEEEEEcCCceeeEEEeccCC---------CcceEEEccCCCceEEE
Q 015198 128 GEFAFRSDVRSVKLSR----DRIVVV----LEHKIYVYSFVDLKLLHQIETLAN---------LRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 128 ~~~~~~~~i~~~~~~~----~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~ 190 (411)
..+.+...+..++|+| ++++++ .++.|.+||..+++++..+..+.. ...+..+.+++++..++
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 9998878889999999 988776 589999999999999988865321 11345566666555666
Q ss_pred EecCCCCeEEEEEcCCc-ceE--EEeccccceeEEEecCCCCEEEEE-cCCCeEEEEEECCCCceEEEEeCCC--CCcce
Q 015198 191 CPGLQRGQVRIEHFGLN-MIK--LINAHDSHIACFTLTLDGLLLATA-STRGTLIRIFNTVDGTRLQEVRRGV--DRAEI 264 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~~-~~~--~~~~~~~~i~~l~~sp~g~~l~s~-s~dg~~I~vwd~~~~~~~~~~~~~~--~~~~v 264 (411)
++...++.|.+|+.... .+. .+ .+...+..++|+|+|++|+++ ..++. |.+||+.+++++..+..+. |.+..
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g~g 373 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPGRG 373 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCTTC
T ss_pred EEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCCCC
Confidence 66778999999887542 222 33 356678899999999977655 45788 9999999999988887532 33333
Q ss_pred EEEEeCCC-CCEEEEEe-CCCcEEEEEcccc
Q 015198 265 YSIALSPN-VQWLAVAS-DKGTVHIFSLRVR 293 (411)
Q Consensus 265 ~~l~~spd-g~~l~s~s-~dg~I~vwd~~~~ 293 (411)
..+ ++|+ +.+++++. .|++|.|||+++.
T Consensus 374 ~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~ 403 (543)
T 1nir_A 374 ANF-VHPKYGPVWSTSHLGDGSISLIGTDPK 403 (543)
T ss_dssp EEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred ccc-CCCCCccEEEeccCCCceEEEEEeCCC
Confidence 333 4677 66666665 5899999999884
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=3.1e-22 Score=203.35 Aligned_cols=238 Identities=11% Similarity=0.003 Sum_probs=175.2
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CC-----cEEEEecCCCcceEEeecCCCC----------------------EEEEEEe
Q 015198 44 EIELISVSWNQDYGCFAAGT--SC-----GFRIYNCEPFKETFRRDLKSGG----------------------FRIVEML 94 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg-----~i~iw~~~~~~~~~~~~~~~~~----------------------~~~~~~~ 94 (411)
...|.+++|+|||++|++++ |+ .|++||+++.+.......+.+. ..+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 56799999999999999887 66 8999999876544333322222 3467788
Q ss_pred ccCCeEEEEecCCCCCCCCCeEEEEECCCC---cEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEe
Q 015198 95 FRCNILALVGAGDNSQYPPTKVIIWDDHQS---RCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIE 169 (411)
Q Consensus 95 ~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~ 169 (411)
|+|++..++.++. +.|++||+.++ +......+...+..++|+|||+.++ .++.|++||+.+++......
T Consensus 116 ~SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 116 WSPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp ECTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred ECCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 9999988877765 89999999888 5444334778899999999999887 78899999999887664443
Q ss_pred ccCCCc--------------ceEEEccCCCceEEEEecCCCC---------------------------------eEEEE
Q 015198 170 TLANLR--------------GLCCLSHHSSTSVLACPGLQRG---------------------------------QVRIE 202 (411)
Q Consensus 170 ~~~~~~--------------~~~~~~~~~~~~~l~~~g~~dg---------------------------------~i~i~ 202 (411)
.+...+ ....+.++|+++.|+++. .|+ .|++|
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~-~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR-IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE-EECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEE-EcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 332211 023456667777777753 332 56667
Q ss_pred EcCC-cceEEEe---ccccceeEEEecCCCCEEEEEcC-----CCeEEEEEECCCCceEEEEeCCCCCc---ceEEEEeC
Q 015198 203 HFGL-NMIKLIN---AHDSHIACFTLTLDGLLLATAST-----RGTLIRIFNTVDGTRLQEVRRGVDRA---EIYSIALS 270 (411)
Q Consensus 203 ~~~~-~~~~~~~---~~~~~i~~l~~sp~g~~l~s~s~-----dg~~I~vwd~~~~~~~~~~~~~~~~~---~v~~l~~s 270 (411)
+... .....+. .|...+..++| |||++|++++. +.. |++||+.+++....+..+ ... .+..++|+
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHET-SPTWVPLHNSLRFL 345 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCSCCEEC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcC-CCCcCCcCCceEEC
Confidence 7665 5544443 47788999999 99999987653 456 999999999887666542 111 34688999
Q ss_pred CCCCEEEEEeCCCcEEEEEcc
Q 015198 271 PNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 271 pdg~~l~s~s~dg~I~vwd~~ 291 (411)
|||+++++++.||.++||.++
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEEC
T ss_pred CCCeEEEEecCCCccEEEEEc
Confidence 999999999999988888876
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.6e-20 Score=171.61 Aligned_cols=231 Identities=13% Similarity=0.075 Sum_probs=165.0
Q ss_pred EEEcCCCCEEE-EEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeE-EEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 50 VSWNQDYGCFA-AGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 50 l~~s~~g~~la-~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
..|.+++.+++ ++. ++.|.+||.++.+....... +.... .+.+++++. +++++..+ +.|.+||+.+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~-~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL--GYDFV-DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPP 74 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC--CCCEE-EEEECSSSCEEEEEESTT-----CEEEEEECSSSSC
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc--cCCcc-eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCce
Confidence 45666666644 555 99999999998666555443 34444 888999886 44554445 8999999999987
Q ss_pred -EEEEeecCceeE-EEEcCCeEEEE--E-c-C--eEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCe
Q 015198 127 -IGEFAFRSDVRS-VKLSRDRIVVV--L-E-H--KIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQ 198 (411)
Q Consensus 127 -~~~~~~~~~i~~-~~~~~~~~~~~--~-d-g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~ 198 (411)
...+........ ++|+|++.+++ . + + .|++||+.+++.+..+..+.. ...+.+++++.++++++..++.
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECTTSSCEEEEEETTTT
T ss_pred eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECCCCCEEEEEecCCCc
Confidence 666664444445 99999998776 2 3 3 899999999998888765443 3566667777656655556677
Q ss_pred -EEEEEcCCcc-e----EEEeccccceeEEEecCCCCEEEE-EcCCCeEEEEEECCCCce---EEEEeCCCCCcceEEEE
Q 015198 199 -VRIEHFGLNM-I----KLINAHDSHIACFTLTLDGLLLAT-ASTRGTLIRIFNTVDGTR---LQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 199 -i~i~~~~~~~-~----~~~~~~~~~i~~l~~sp~g~~l~s-~s~dg~~I~vwd~~~~~~---~~~~~~~~~~~~v~~l~ 268 (411)
|.+|+..... + ............++|+|+|++|++ +..++. |++||+.+++. +..+.. ...+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~---~~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGT---NNLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEEC---SSCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccC---CCCCceEE
Confidence 9998765321 1 122234456789999999996554 456788 99999999988 777774 34678899
Q ss_pred eCCCCCEEEEEe-CCCcEEEEEcccccc
Q 015198 269 LSPNVQWLAVAS-DKGTVHIFSLRVRVV 295 (411)
Q Consensus 269 ~spdg~~l~s~s-~dg~I~vwd~~~~~~ 295 (411)
|+|||++|+++. .++.|.+||+.+++.
T Consensus 228 ~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 228 VSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp ECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred ECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 999999777665 477899999998764
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=6.7e-20 Score=167.98 Aligned_cols=273 Identities=10% Similarity=0.051 Sum_probs=176.2
Q ss_pred CEEEEE-e-CCcEEEEecCCCcc-eEEeecCCCCEEEEEEeccCCeEEEEec-CCCCCCCCCeEEEEECC--CCcE--EE
Q 015198 57 GCFAAG-T-SCGFRIYNCEPFKE-TFRRDLKSGGFRIVEMLFRCNILALVGA-GDNSQYPPTKVIIWDDH--QSRC--IG 128 (411)
Q Consensus 57 ~~la~g-~-dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~-~~d~~~~d~~i~vwd~~--~~~~--~~ 128 (411)
++++++ . ++.|++|+++.... .....+ .+...+..+.|++++..++.+ ..+ +.|.+|++. +++. +.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~ 78 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGALTFAA 78 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCceeecc
Confidence 345544 5 99999999963222 122222 344456678888888644444 333 899999987 5553 34
Q ss_pred EEeecCceeEEEEcCCeEEEE----EcCeEEEEEcC---CceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEE
Q 015198 129 EFAFRSDVRSVKLSRDRIVVV----LEHKIYVYSFV---DLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRI 201 (411)
Q Consensus 129 ~~~~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i 201 (411)
.+.....+..++|+|++..++ .++.|++||+. ..+.+..+..+. ....+.+++++..+++++..++.|.+
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 79 ESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---GCHSANISPDNRTLWVPALKQDRICL 155 (343)
T ss_dssp EEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---TBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred ccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---CceEEEECCCCCEEEEecCCCCEEEE
Confidence 455455889999999998665 37899999994 334444444333 23445566667777665557899999
Q ss_pred EEcCC-cceE-----EEec-cccceeEEEecCCCCEEEEE-cCCCeEEEEEECCC--Cce--EEEEeCC----CCCcceE
Q 015198 202 EHFGL-NMIK-----LINA-HDSHIACFTLTLDGLLLATA-STRGTLIRIFNTVD--GTR--LQEVRRG----VDRAEIY 265 (411)
Q Consensus 202 ~~~~~-~~~~-----~~~~-~~~~i~~l~~sp~g~~l~s~-s~dg~~I~vwd~~~--~~~--~~~~~~~----~~~~~v~ 265 (411)
|+... ..+. .+.. ....+..++|+|+|++|+++ ..++. |++||+.. ++. ...+... .....+.
T Consensus 156 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 156 FTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp EEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEE
T ss_pred EEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCcc
Confidence 88765 3332 2232 34478889999999977554 47888 99999953 443 3333311 0123577
Q ss_pred EEEeCCCCCEEEEE-eCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCc
Q 015198 266 SIALSPNVQWLAVA-SDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPK 344 (411)
Q Consensus 266 ~l~~spdg~~l~s~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (411)
.++|+|+|++|+++ ..++.|.+|+++......
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~----------------------------------------------- 267 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVL----------------------------------------------- 267 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCE-----------------------------------------------
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCce-----------------------------------------------
Confidence 89999999988754 478999999998421100
Q ss_pred ccccccceEEEEeCCCceEEEEEccC-CEEEEEE-eCCcEEEEEEecCCC
Q 015198 345 YFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVS-MDGSFYRCSFDPVHG 392 (411)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~dg~~~~~~~~~~~~ 392 (411)
.....+..... ...++|+++ +.|++++ .+|.+.+|.++.+.+
T Consensus 268 -----~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g 311 (343)
T 1ri6_A 268 -----SKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQG 311 (343)
T ss_dssp -----EEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTT
T ss_pred -----EEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCc
Confidence 00112222222 445789998 5577777 479999999997554
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=4.6e-20 Score=179.91 Aligned_cols=249 Identities=10% Similarity=0.053 Sum_probs=189.0
Q ss_pred CCCCeEEEEEcC----CCCEEEEEe--CCcEEEEecCCCcceEEeecCC---------CCEEEEEEeccCC-eEEEEecC
Q 015198 43 DEIELISVSWNQ----DYGCFAAGT--SCGFRIYNCEPFKETFRRDLKS---------GGFRIVEMLFRCN-ILALVGAG 106 (411)
Q Consensus 43 h~~~V~~l~~s~----~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~-~~~l~s~~ 106 (411)
+...+..++|+| ||++|++++ ++.|.|||..+.+.+....... ....+..+.++++ ..++++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 455689999999 999999888 8999999998866554443311 1225677888874 46667777
Q ss_pred CCCCCCCCeEEEEECCCCcEEE--EEeecCceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeEEEeccCCC--cceE
Q 015198 107 DNSQYPPTKVIIWDDHQSRCIG--EFAFRSDVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLHQIETLANL--RGLC 178 (411)
Q Consensus 107 ~d~~~~d~~i~vwd~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~ 178 (411)
.+ +.|.+||+.+.+.+. .+.+...+..+.|+|++++++ .+++|.+||+.+++++..+.....+ ....
T Consensus 300 ~~-----g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 300 ET-----GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp TT-----TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred CC-----CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 66 999999998876544 555677788999999998655 4789999999999999888753221 1233
Q ss_pred EEccCCC-ceEEEEecCCCCeEEEEEcC--------CcceEEEeccccceeEEEecCCCCEEEEEc-------CCCeEEE
Q 015198 179 CLSHHSS-TSVLACPGLQRGQVRIEHFG--------LNMIKLINAHDSHIACFTLTLDGLLLATAS-------TRGTLIR 242 (411)
Q Consensus 179 ~~~~~~~-~~~l~~~g~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s-------~dg~~I~ 242 (411)
.+. +++ +.++++....+++|.+|+.. .+.++.+..|...+..++++|+|++|++++ .++. |.
T Consensus 375 ~~~-~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~-v~ 452 (543)
T 1nir_A 375 NFV-HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS-VA 452 (543)
T ss_dssp EEE-ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC-EE
T ss_pred ccC-CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce-EE
Confidence 342 444 55555433368999998875 467889999998889999999999999987 2668 99
Q ss_pred EEECCCCceE-EEEeC------CCCCcceEEEEeCCCCCEEEEEe-----CCCcEEEEEccccccCCC
Q 015198 243 IFNTVDGTRL-QEVRR------GVDRAEIYSIALSPNVQWLAVAS-----DKGTVHIFSLRVRVVGED 298 (411)
Q Consensus 243 vwd~~~~~~~-~~~~~------~~~~~~v~~l~~spdg~~l~s~s-----~dg~I~vwd~~~~~~~~~ 298 (411)
|||+.+++.. ..+.. ..+...+..+.|+|+|+.|+++. .|+.|.|||..+++....
T Consensus 453 v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 453 VFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp EEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred EEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 9999999877 44421 12456899999999999988663 479999999999987653
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=1.2e-19 Score=167.09 Aligned_cols=239 Identities=13% Similarity=0.087 Sum_probs=176.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe--------CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeE-EEEecCCCCCCC
Q 015198 42 VDEIELISVSWNQDYGCFAAGT--------SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNIL-ALVGAGDNSQYP 112 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~--------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~~~ 112 (411)
.....+..++|+|+++++++++ ++.|.+||.++.+....... ......+.+++++. ++++...+
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~---- 110 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVN---- 110 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTT----
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCC----
Confidence 3456788999999999998887 35799999988665544433 12245567777764 55565555
Q ss_pred CCeEEEEECCCCcEEEEEeecC----------ceeEEEEcCCeEEEE--E---cCeEEEEEcCCceeeEEEeccCCCcce
Q 015198 113 PTKVIIWDDHQSRCIGEFAFRS----------DVRSVKLSRDRIVVV--L---EHKIYVYSFVDLKLLHQIETLANLRGL 177 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~~~~----------~i~~~~~~~~~~~~~--~---dg~i~iwd~~~~~~~~~~~~~~~~~~~ 177 (411)
+.|.+||..+++.+..+.... .+.++.|+|++..++ . ++.|++||+.+++.+..+..+......
T Consensus 111 -~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 189 (353)
T 3vgz_A 111 -SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTG 189 (353)
T ss_dssp -TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCC
T ss_pred -CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccce
Confidence 899999999999988887321 268899999987555 2 678999999999998888644332333
Q ss_pred EEEccCCCceEEEEecCCCCeEEEEEcCC-cceEEEec----cccceeEEEecCCCCEEEEEcCC-CeEEEEEECCCCce
Q 015198 178 CCLSHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINA----HDSHIACFTLTLDGLLLATASTR-GTLIRIFNTVDGTR 251 (411)
Q Consensus 178 ~~~~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~----~~~~i~~l~~sp~g~~l~s~s~d-g~~I~vwd~~~~~~ 251 (411)
+.+ ++++..++++ ..++.|.+|+... +....+.. +...+..++|+|+|++|++++.+ +. |.+||+.+++.
T Consensus 190 ~~~--s~dg~~l~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-v~~~d~~~~~~ 265 (353)
T 3vgz_A 190 LAL--DSEGKRLYTT-NADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE-VLVVDTRNGNI 265 (353)
T ss_dssp CEE--ETTTTEEEEE-CTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE-EEEEETTTCCE
T ss_pred EEE--CCCCCEEEEE-cCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE-EEEEECCCCcE
Confidence 444 4555666664 4688999987654 44445543 45567889999999977766654 77 99999999999
Q ss_pred EEEEeCCCCCcceEEEEeCCCCCEEEEEe-CCCcEEEEEccccccC
Q 015198 252 LQEVRRGVDRAEIYSIALSPNVQWLAVAS-DKGTVHIFSLRVRVVG 296 (411)
Q Consensus 252 ~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~dg~I~vwd~~~~~~~ 296 (411)
+..+..+ . ...++|+|+|++|+++. .++.|.+||+.+++..
T Consensus 266 ~~~~~~~--~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 266 LAKVAAP--E--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp EEEEECS--S--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EEEEEcC--C--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 8888753 2 25689999999766555 6899999999887643
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.88 E-value=1.3e-20 Score=172.37 Aligned_cols=238 Identities=10% Similarity=-0.010 Sum_probs=176.9
Q ss_pred CeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCC---CCEEEEEEeccCCeEEEEecC------------CC
Q 015198 46 ELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKS---GGFRIVEMLFRCNILALVGAG------------DN 108 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~s~~------------~d 108 (411)
.+..++|+|+|++++++. ++.|.+||+.+.+......+.. +...+..+.+++++..++.+. .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 478899999998776554 7899999998866544443311 012345677888885554442 23
Q ss_pred CCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCce
Q 015198 109 SQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTS 187 (411)
Q Consensus 109 ~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (411)
+.|.+||+.+++.+..+.....+.+++|+|++..++ .++.|++||+.+++.+..+..+..... . .+++++.
T Consensus 115 -----~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~--~~s~dg~ 186 (337)
T 1pby_B 115 -----TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAE-T--YAQPDVL 186 (337)
T ss_dssp -----CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTT-T--BCCCBCC
T ss_pred -----ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCC-c--eeCCCcc
Confidence 899999999999888888777788999999998666 789999999999998877765441111 1 4455555
Q ss_pred EEEEecCCCCe-----------------------EEEEEcCCcceE--EEeccccceeEEEecCCCCEEEEEcCCCeEEE
Q 015198 188 VLACPGLQRGQ-----------------------VRIEHFGLNMIK--LINAHDSHIACFTLTLDGLLLATASTRGTLIR 242 (411)
Q Consensus 188 ~l~~~g~~dg~-----------------------i~i~~~~~~~~~--~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~ 242 (411)
.+++++..++. |.+|+.....+. .+..+...+..++|+|+|++|+++ ++. |+
T Consensus 187 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~ 263 (337)
T 1pby_B 187 AVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LE 263 (337)
T ss_dssp CCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EE
T ss_pred EEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EE
Confidence 55554444443 456666554432 234556678899999999999888 688 99
Q ss_pred EEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCC
Q 015198 243 IFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 243 vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
+||+.+++.+..+.. ...+.+++|+|||++|++++.++.|++||+.+++...
T Consensus 264 ~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 264 SFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKG 315 (337)
T ss_dssp EEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEE
T ss_pred EEECCCCcCcceecC---CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEE
Confidence 999999998888774 2357899999999999999999999999999987653
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.87 E-value=3.1e-20 Score=170.18 Aligned_cols=240 Identities=13% Similarity=0.122 Sum_probs=167.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe-C-CcEEEEecC--CCcceEEeecCCCCEEEEEEeccCCeEEE-EecCCCCCCCCCe
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT-S-CGFRIYNCE--PFKETFRRDLKSGGFRIVEMLFRCNILAL-VGAGDNSQYPPTK 115 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~-d-g~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~d~~~~d~~ 115 (411)
..|...+.+++|+|+|++|++++ + +.|.+|+++ +........+..+. .+..+.|++++..+ +++..+ +.
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~-----~~ 107 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNA-----GN 107 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTT-----TE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCC-----Ce
Confidence 34677899999999999998888 4 999999998 33322222232222 66778889988654 444445 89
Q ss_pred EEEEECC---CCcEEEEEeecCceeEEEEcCCeEEEE----EcCeEEEEEcCC-ceeeE----EEeccCCCcceEEEccC
Q 015198 116 VIIWDDH---QSRCIGEFAFRSDVRSVKLSRDRIVVV----LEHKIYVYSFVD-LKLLH----QIETLANLRGLCCLSHH 183 (411)
Q Consensus 116 i~vwd~~---~~~~~~~~~~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~-~~~~~----~~~~~~~~~~~~~~~~~ 183 (411)
|.+||+. .++.+..+.....+.+++|+|++..++ .++.|++||+.+ ++... .+..+.. .....+.++
T Consensus 108 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 186 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFH 186 (343)
T ss_dssp EEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEEC
T ss_pred EEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCC-CCcceEEEC
Confidence 9999984 334455555566789999999987555 479999999987 65432 2222221 244567777
Q ss_pred CCceEEEEecCCCCeEEEEEcCC--cc---eEEEecc------ccceeEEEecCCCCEEE-EEcCCCeEEEEEECC--CC
Q 015198 184 SSTSVLACPGLQRGQVRIEHFGL--NM---IKLINAH------DSHIACFTLTLDGLLLA-TASTRGTLIRIFNTV--DG 249 (411)
Q Consensus 184 ~~~~~l~~~g~~dg~i~i~~~~~--~~---~~~~~~~------~~~i~~l~~sp~g~~l~-s~s~dg~~I~vwd~~--~~ 249 (411)
+++.++++++..++.|.+|+... .. ...+... ...+..++|+|+|++|+ +...++. |++||+. ++
T Consensus 187 pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~~ 265 (343)
T 1ri6_A 187 PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDGS 265 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTSC
T ss_pred CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCCC
Confidence 78887776676889999998753 22 2222211 23466899999998777 4557888 9999998 33
Q ss_pred --ceEEEEeCCCCCcceEEEEeCCCCCEEEEEe-CCCcEEEEEcc
Q 015198 250 --TRLQEVRRGVDRAEIYSIALSPNVQWLAVAS-DKGTVHIFSLR 291 (411)
Q Consensus 250 --~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~dg~I~vwd~~ 291 (411)
+.+..+.. +. .+..++|+|+|++|++++ .++.|.+|+++
T Consensus 266 ~~~~~~~~~~--~~-~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 266 VLSKEGFQPT--ET-QPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CEEEEEEEEC--SS-SCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ceEEeeeecC--CC-ccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 34444544 22 388999999999888887 57999999665
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=2.1e-21 Score=196.71 Aligned_cols=240 Identities=10% Similarity=0.025 Sum_probs=168.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCE---EEEEEeccCCeEEEEecCCCCCC----CCCeEE
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGF---RIVEMLFRCNILALVGAGDNSQY----PPTKVI 117 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~s~~~d~~~----~d~~i~ 117 (411)
..+.+++|+|||++++++.||.|++||+.+.+...... .+.. .+..+.|+|++..++.+..+... .++.|.
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~--~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIE--GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEEC--TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEec--cccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 34778999999998877449999999998865543332 3332 37788999999887776543111 237899
Q ss_pred EEECCCCcEEEEEe----ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCc----------------
Q 015198 118 IWDDHQSRCIGEFA----FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLR---------------- 175 (411)
Q Consensus 118 vwd~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~---------------- 175 (411)
+||+.+++. ..+. +...+..++|+|||+.++ .++.|++||+.+++.......+...+
T Consensus 95 ~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 95 LSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 999999876 3333 233488999999998877 78999999999887766555433322
Q ss_pred ceEEEccCCCceEEEEecCCC---------------------------------CeEEEEEcCCcc-eEEEecc------
Q 015198 176 GLCCLSHHSSTSVLACPGLQR---------------------------------GQVRIEHFGLNM-IKLINAH------ 215 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~d---------------------------------g~i~i~~~~~~~-~~~~~~~------ 215 (411)
....+.++|+++.|+++...+ ..|++|+..... ...+..+
T Consensus 174 ~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~ 253 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR 253 (723)
T ss_dssp SSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS
T ss_pred CcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc
Confidence 125677788888888754221 267778876654 3555544
Q ss_pred ccceeEEEecCCCCEEEEEcC----CCeEEEEEECCCCceEEEEeCCCCCcce----EEEEeCCCCCEEEE--EeCCC--
Q 015198 216 DSHIACFTLTLDGLLLATAST----RGTLIRIFNTVDGTRLQEVRRGVDRAEI----YSIALSPNVQWLAV--ASDKG-- 283 (411)
Q Consensus 216 ~~~i~~l~~sp~g~~l~s~s~----dg~~I~vwd~~~~~~~~~~~~~~~~~~v----~~l~~spdg~~l~s--~s~dg-- 283 (411)
...+..++|+|||++|++... +.. |++||+.+++....+... +...+ ..++|+|||+.|+. +..++
T Consensus 254 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 254 EYYITMVKWATSTKVAVTWLNRAQNVSI-LTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGR 331 (723)
T ss_dssp SEEEEEEEESSSSEEEEEEEETTSCEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSCSEEEEEEECCSSS
T ss_pred cceeEEEEEeCCCeEEEEEEcCCCCeEE-EEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCCeEEEEEecccCCC
Confidence 667899999999998876643 245 999999999876655432 22333 37899999997775 44666
Q ss_pred ----cEEEEE
Q 015198 284 ----TVHIFS 289 (411)
Q Consensus 284 ----~I~vwd 289 (411)
.|++||
T Consensus 332 ~~~~~l~~~d 341 (723)
T 1xfd_A 332 GKFYHITVSS 341 (723)
T ss_dssp SCEEEEEEEC
T ss_pred cceeEEEEEe
Confidence 466666
No 138
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=8.3e-20 Score=166.94 Aligned_cols=246 Identities=10% Similarity=0.104 Sum_probs=171.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcc-eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCC--eE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKE-TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPT--KV 116 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~--~i 116 (411)
.+...+ +++|+|+|++|+++. ++.|.+||.++.+. ..... .+......+.+++++..++....+ .+ .|
T Consensus 38 ~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~----~~~~~i 110 (331)
T 3u4y_A 38 LGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ--EGQSSMADVDITPDDQFAVTVTGL----NHPFNM 110 (331)
T ss_dssp CCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE--ECSSCCCCEEECTTSSEEEECCCS----SSSCEE
T ss_pred ccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc--cCCCCccceEECCCCCEEEEecCC----CCcccE
Confidence 345556 999999999777665 88999999987654 33222 222222237788888766644432 12 99
Q ss_pred EEEECCCCcEEEEEeecCceeEEEEcCCeEEEE----EcCe-EEEEEcCCceeeEEE--eccCCCcceEEEccCCCceEE
Q 015198 117 IIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV----LEHK-IYVYSFVDLKLLHQI--ETLANLRGLCCLSHHSSTSVL 189 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~dg~-i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l 189 (411)
.+||+.+++.+..+.......+++|+|+++.++ .++. |.+|++.....+... ...........+.+++++.++
T Consensus 111 ~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 111 QSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 999999999998888777789999999997444 3467 999998754332111 100111235667777788877
Q ss_pred EEecCCCCeEEEEEcCC-cc---eEEEeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCce--EEEEeCC--CC
Q 015198 190 ACPGLQRGQVRIEHFGL-NM---IKLINAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTR--LQEVRRG--VD 260 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~-~~---~~~~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~--~~~~~~~--~~ 260 (411)
++++..++.|.+|+... +. +..+.. ...+..++|+|+|++|++++ .++. |.+||+.+++. +..+... .+
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVD-VFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEE-EEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCE-EEEEECCCCceeeecccccccccC
Confidence 77677789999988764 44 455553 46678999999999776665 4667 99999999877 4444432 11
Q ss_pred Ccc---eEEEEeCCCCCEEEEEeC-CCcEEEEEccccccC
Q 015198 261 RAE---IYSIALSPNVQWLAVASD-KGTVHIFSLRVRVVG 296 (411)
Q Consensus 261 ~~~---v~~l~~spdg~~l~s~s~-dg~I~vwd~~~~~~~ 296 (411)
... ...++|+|||++|++++. ++.|.+||+..+...
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~ 308 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVG 308 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCccc
Confidence 222 245899999998876655 568999999876643
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1e-20 Score=169.29 Aligned_cols=236 Identities=7% Similarity=-0.110 Sum_probs=170.9
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEeCCcEEEEecCC-CcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGTSCGFRIYNCEP-FKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
....|...|.+++|+|+|++|+++.++.|.+||+++ .+...... ..+...+..+.|++++..++.+..+.. ....|.
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~ 113 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDT-GFATICNNDHGISPDGALYAISDKVEF-GKSAIY 113 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCC-TTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecc-ccccccccceEECCCCCEEEEEEeCCC-CcceEE
Confidence 345688899999999999999999999999999987 54432221 122355677889998877776652200 125566
Q ss_pred EEECCCCcEEEEEeecCceeEEEEcCCeEEEE----EcCeEEEEEc--CCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV----LEHKIYVYSF--VDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
+|+..+++ ...+.....+..++|+|++..++ .++.+++|++ .+++ ...+..+.. .+..+.+++++..|++
T Consensus 114 ~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~--~~~~~~~s~dg~~l~~ 189 (297)
T 2ojh_A 114 LLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEG--RNDGPDYSPDGRWIYF 189 (297)
T ss_dssp EEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSS--CEEEEEECTTSSEEEE
T ss_pred EEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCC--ccccceECCCCCEEEE
Confidence 66666655 34455455689999999998665 5888888886 3333 334444443 4556667777888877
Q ss_pred ecCCCCeEEEEEc--CCcceEEEeccccceeEEEecCCCCEEEEEcCC-----------CeEEEEEECCCCceEEE--Ee
Q 015198 192 PGLQRGQVRIEHF--GLNMIKLINAHDSHIACFTLTLDGLLLATASTR-----------GTLIRIFNTVDGTRLQE--VR 256 (411)
Q Consensus 192 ~g~~dg~i~i~~~--~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~d-----------g~~I~vwd~~~~~~~~~--~~ 256 (411)
++..++.+++|.. .......+..|...+..++|+|+|++|++++.+ +. |++||+.+++.... +.
T Consensus 190 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~~ 268 (297)
T 2ojh_A 190 NSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR-VQLMDMDGGNVETLFDLF 268 (297)
T ss_dssp EECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE-EEEEETTSCSCEEEEEEE
T ss_pred EecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE-EEEEecCCCCceeeeccC
Confidence 7666888888765 456677777888899999999999999888765 56 99999988876433 33
Q ss_pred CCCCCcceEEEEeCCCCCEEEEEeCCC
Q 015198 257 RGVDRAEIYSIALSPNVQWLAVASDKG 283 (411)
Q Consensus 257 ~~~~~~~v~~l~~spdg~~l~s~s~dg 283 (411)
. |...+..++|+|++++|++++.+.
T Consensus 269 ~--~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 269 G--GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp E--STTTSCSCCBCTTSSEEEEEEECC
T ss_pred C--CCcccccceECCCCCEEEEEEecc
Confidence 4 666889999999999998887654
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.6e-20 Score=168.08 Aligned_cols=216 Identities=11% Similarity=0.015 Sum_probs=161.9
Q ss_pred CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC-CcEEEEEe-e-cCceeEEE
Q 015198 64 SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ-SRCIGEFA-F-RSDVRSVK 140 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~-~~~~~~~~-~-~~~i~~~~ 140 (411)
++.|++||+.+.+..... .+...+.++.|+|++..++.+.. +.|++||+.+ ++...... + ...+.+++
T Consensus 21 ~~~i~~~d~~~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVW---QTPELFEAPNWSPDGKYLLLNSE------GLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp CEEEEEEETTTTEEEEEE---EESSCCEEEEECTTSSEEEEEET------TEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred ceeEEEEeCCCCceeeec---cCCcceEeeEECCCCCEEEEEcC------CeEEEEeCCCCCCceEeccccccccccceE
Confidence 889999999875543222 45566788999999988887763 8999999998 87766555 3 47789999
Q ss_pred EcCCeEEEE--E-----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc--CCcceEE
Q 015198 141 LSRDRIVVV--L-----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF--GLNMIKL 211 (411)
Q Consensus 141 ~~~~~~~~~--~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~--~~~~~~~ 211 (411)
|+|++..++ . ...|..+++.+++ ...+..+. ....+.+++++..|++++..++.++||.. .......
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~---~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL---PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS---SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC---CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 999998887 2 2455556655554 33343332 24556777778888766778899999774 4455666
Q ss_pred EeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECC-CCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC-------
Q 015198 212 INAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTV-DGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK------- 282 (411)
Q Consensus 212 ~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~-~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d------- 282 (411)
+..+...+.+++|+|+|++|+.++ .++. ++||++. .+..+..+.. +...+..++|+|+|++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred cccCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 777888999999999999887665 5888 9999876 4555666665 66789999999999999988776
Q ss_pred ----CcEEEEEcccccc
Q 015198 283 ----GTVHIFSLRVRVV 295 (411)
Q Consensus 283 ----g~I~vwd~~~~~~ 295 (411)
+.|++||+++++.
T Consensus 245 ~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp SSEEEEEEEEETTSCSC
T ss_pred ccCceEEEEEecCCCCc
Confidence 4699999987653
No 141
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=2.3e-20 Score=184.38 Aligned_cols=230 Identities=10% Similarity=0.072 Sum_probs=163.8
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCC-EEEEEEeccCCeEEEEecCCCCCCCCCeEEE--
Q 015198 44 EIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGG-FRIVEMLFRCNILALVGAGDNSQYPPTKVII-- 118 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v-- 118 (411)
..+|++++|+|||++||+++ +|+++||++++.+ ... +..+. ..+..+.|+|+ .++++++.+. .+....+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~--lt~~~~~~~~~~~~spd-~~l~~~~~~~--g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVK--LNREPINSVLDPHYGVG-RVILVRDVSK--GAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEE--CCSSCCSEECEECTTCS-EEEEEEECST--TSCCEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEe--eecccccccccccCCCC-eEEEEeccCC--CCcceEEEE
Confidence 45799999999999999876 9999999986533 222 32444 57888999999 5555443200 0144445
Q ss_pred EEC-CCCcEEEEEeecCceeEEEEcCCe--EEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 119 WDD-HQSRCIGEFAFRSDVRSVKLSRDR--IVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 119 wd~-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
++. ..+... .+.....+...+|+|++ ..++ .++.+.+||+.+++.......+. ..+.++|+|+.|++++
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-----~~~~~spDG~~la~~~ 168 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-----FGFVSDIRGDLIAGLG 168 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-----CEEEEEEETTEEEEEE
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-----ceEEECCCCCEEEEEE
Confidence 554 123322 33333334455677666 4444 45666699999887665554332 3455566777888644
Q ss_pred CCC----CeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCC--eEEEEEECCCCceEEEEeCCCCCcceEEE
Q 015198 194 LQR----GQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRG--TLIRIFNTVDGTRLQEVRRGVDRAEIYSI 267 (411)
Q Consensus 194 ~~d----g~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg--~~I~vwd~~~~~~~~~~~~~~~~~~v~~l 267 (411)
.+ +.|++|+........+..|...+..++|+|||++|+++..++ . |++||+.+++.. .+.. +...+..+
T Consensus 169 -~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~~--~~~~~~~~ 243 (582)
T 3o4h_A 169 -FFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLEL--PSKDFSSY 243 (582)
T ss_dssp -EEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECCC--SCSHHHHH
T ss_pred -EcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-EccC--CCcChhhh
Confidence 34 678888887777778888999999999999999999888888 7 999999998877 5544 55566666
Q ss_pred E--------eCCCCCEEEEEeCCCcEEEEEc
Q 015198 268 A--------LSPNVQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 268 ~--------~spdg~~l~s~s~dg~I~vwd~ 290 (411)
+ |+|||.++++++.|+++++|++
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 6 9999998999999999999999
No 142
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.86 E-value=8.3e-20 Score=166.95 Aligned_cols=259 Identities=10% Similarity=0.049 Sum_probs=181.5
Q ss_pred CEEEEEe-CCcEEEEecCCCcceEEeecCCCCE-EEEEEeccCCe-EEEEecCCCCCCCCCeEEEEECCCCcEEEEEeec
Q 015198 57 GCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGF-RIVEMLFRCNI-LALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFR 133 (411)
Q Consensus 57 ~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~ 133 (411)
++|+++. ++.|.+||..+.+......+ .+.. .+..+.+++++ .+++++..+ +.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI-ADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC-TTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc-CCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEcC
Confidence 4677887 99999999988665444433 2211 35567788887 455666655 89999999999988888743
Q ss_pred C------ceeEEEEcCCeEEEE-E--------------cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 134 S------DVRSVKLSRDRIVVV-L--------------EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 134 ~------~i~~~~~~~~~~~~~-~--------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
. .+..++|+|++..++ . ++.|++||+.+++.+..+..... ...+ .+++++..|+++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~--~~s~dg~~l~~~ 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ-ITML--AWARDGSKLYGL 152 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS-CCCE--EECTTSSCEEEE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC-ccee--EECCCCCEEEEe
Confidence 3 788999999996655 3 48999999999988887765432 2334 455566666654
Q ss_pred cCCCCeEEEEEcCCc-ceEEEeccccceeEEEecCCCCEEEEEcCCC------------------------eEEEEEECC
Q 015198 193 GLQRGQVRIEHFGLN-MIKLINAHDSHIACFTLTLDGLLLATASTRG------------------------TLIRIFNTV 247 (411)
Q Consensus 193 g~~dg~i~i~~~~~~-~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg------------------------~~I~vwd~~ 247 (411)
++.|++|+.... ....+..+.. ...+.|+|+|+.|+..+..+ . |.+||+.
T Consensus 153 ---~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~d~~ 227 (337)
T 1pby_B 153 ---GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG-LLTMDLE 227 (337)
T ss_dssp ---SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE-EEEEETT
T ss_pred ---CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccc-eEEEeCC
Confidence 578999887654 4444443331 11237899998766554333 3 6899999
Q ss_pred CCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCC
Q 015198 248 DGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPST 327 (411)
Q Consensus 248 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (411)
+++.. .+....+...+.+++|+|||++|+++ ++.|++||+.+++...
T Consensus 228 ~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~------------------------------ 274 (337)
T 1pby_B 228 TGEMA-MREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIK------------------------------ 274 (337)
T ss_dssp TCCEE-EEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEE------------------------------
T ss_pred CCCce-EeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcc------------------------------
Confidence 98875 33322255678899999999999888 7899999998876431
Q ss_pred CCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 328 GANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+. ....++|+++ +.|++++.+|.+++|.+..
T Consensus 275 --------------------------~~~~~~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 275 --------------------------RVPLPH-SYYSVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp --------------------------EEECSS-CCCEEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred --------------------------eecCCC-ceeeEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 222222 2345789998 5688888899999997764
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=1.1e-19 Score=167.40 Aligned_cols=241 Identities=13% Similarity=0.151 Sum_probs=160.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe---CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecC-CCCCCCCCeEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT---SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAG-DNSQYPPTKVI 117 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~~~d~~i~ 117 (411)
.+...+..++|+|||++++++. ++.|.+|++++........+..+...+..+.+++++..++.++ .+ +.|.
T Consensus 37 ~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~-----~~v~ 111 (347)
T 3hfq_A 37 AATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK-----GTAE 111 (347)
T ss_dssp EECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT-----TEEE
T ss_pred eccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC-----CEEE
Confidence 3456678899999999444443 4799999997644322222223344556778888886555444 44 9999
Q ss_pred EEECCC-Cc--EEEEEeec----------CceeEEEEcCCeEEEE---EcCeEEEEEcC-CceeeEE--EeccCCCcceE
Q 015198 118 IWDDHQ-SR--CIGEFAFR----------SDVRSVKLSRDRIVVV---LEHKIYVYSFV-DLKLLHQ--IETLANLRGLC 178 (411)
Q Consensus 118 vwd~~~-~~--~~~~~~~~----------~~i~~~~~~~~~~~~~---~dg~i~iwd~~-~~~~~~~--~~~~~~~~~~~ 178 (411)
+|++.. +. .+..+.+. ..+.+++|+|++++++ .++.|++|++. +++.... +..... ....
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g-~~p~ 190 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG-FGPR 190 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT-CCEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC-CCCc
Confidence 999853 33 23333322 2378899999998555 47899999998 5543322 222221 2344
Q ss_pred EEccCCCceEEEEecCCCCeEEEEEcCC--cc---eEEEeccc------cceeEEEecCCCCEEE-EEcCCCeEEEEEEC
Q 015198 179 CLSHHSSTSVLACPGLQRGQVRIEHFGL--NM---IKLINAHD------SHIACFTLTLDGLLLA-TASTRGTLIRIFNT 246 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~---~~~~~~~~------~~i~~l~~sp~g~~l~-s~s~dg~~I~vwd~ 246 (411)
.+.+++++.++++++..++.|.+|+... .. +..+.... ..+..++|+|+|++|+ +...++. |.+||+
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~ 269 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAV 269 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEE
Confidence 5677778887777677889999987653 22 22333222 3578899999999774 5556788 999998
Q ss_pred CC-C--ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC-CcEEEEEcc
Q 015198 247 VD-G--TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK-GTVHIFSLR 291 (411)
Q Consensus 247 ~~-~--~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d-g~I~vwd~~ 291 (411)
.. + +.+..+.. +...+..++|+|||++|++++.+ +.|.+|+++
T Consensus 270 ~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 270 TADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 73 2 44445554 44568899999999998888765 889999664
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=9.7e-20 Score=183.96 Aligned_cols=236 Identities=11% Similarity=0.027 Sum_probs=167.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC-
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ- 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~- 123 (411)
..|.+++|+|| +.++.+.++.|++||+.+.+. .... .+...+..+.|+|++..++.. .+ +.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~-~~l~--~~~~~~~~~~~SpdG~~la~~-~~-----~~i~v~~~~~~ 151 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKV-TYLF--DTNEETASLDFSPVGDRVAYV-RN-----HNLYIARGGKL 151 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEE-EEEE--CCTTCCTTCEECTTSSEEEEE-ET-----TEEEEEECBCT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCce-EEcc--CCcccccCCcCCCCCCEEEEE-EC-----CeEEEEecCcc
Confidence 57999999999 777777899999999987543 2221 334446667899999777775 34 9999999988
Q ss_pred ----CcEEEEEe-ecCc--------------eeEEEEcCCeEEEE--E-c------------------------------
Q 015198 124 ----SRCIGEFA-FRSD--------------VRSVKLSRDRIVVV--L-E------------------------------ 151 (411)
Q Consensus 124 ----~~~~~~~~-~~~~--------------i~~~~~~~~~~~~~--~-d------------------------------ 151 (411)
++...... .... +.++.|+||++.++ . |
T Consensus 152 ~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~ 231 (706)
T 2z3z_A 152 GEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTP 231 (706)
T ss_dssp TSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSC
T ss_pred cccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCC
Confidence 77665444 2222 58999999998887 2 1
Q ss_pred ---CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCC-----eEEEEEcCCc-ceEEEec--ccc---
Q 015198 152 ---HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRG-----QVRIEHFGLN-MIKLINA--HDS--- 217 (411)
Q Consensus 152 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg-----~i~i~~~~~~-~~~~~~~--~~~--- 217 (411)
..|++||+.+++.............+..+.+++++..|+++. .++ .|++|+.... ....+.. +..
T Consensus 232 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~-~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 232 SHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE-VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE-ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE-eCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 579999999887654433222223566777788888777643 333 7888887665 4444432 222
Q ss_pred ceeEEEecC--CCCEEEEEcCCCeEEEEEECC-CCceEEEEeCCCCCcceEE-EEeCCCCCEEEEEeCC-C----cEEEE
Q 015198 218 HIACFTLTL--DGLLLATASTRGTLIRIFNTV-DGTRLQEVRRGVDRAEIYS-IALSPNVQWLAVASDK-G----TVHIF 288 (411)
Q Consensus 218 ~i~~l~~sp--~g~~l~s~s~dg~~I~vwd~~-~~~~~~~~~~~~~~~~v~~-l~~spdg~~l~s~s~d-g----~I~vw 288 (411)
.+..++|+| +|++|++++.++. ++||++. +++.+..+.. +...+.. ++|+|||+.|+.++.+ + .|+.|
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 387 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCI 387 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEE
T ss_pred ccCCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEE
Confidence 246789999 9999999999998 9999876 6677777765 5556776 7999999988765554 3 45566
Q ss_pred Eccccc
Q 015198 289 SLRVRV 294 (411)
Q Consensus 289 d~~~~~ 294 (411)
|+.+++
T Consensus 388 d~~~~~ 393 (706)
T 2z3z_A 388 DIKGGK 393 (706)
T ss_dssp ETTCCC
T ss_pred EcCCCC
Confidence 665543
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=5.8e-20 Score=186.64 Aligned_cols=234 Identities=10% Similarity=0.045 Sum_probs=168.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCc--ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFK--ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
.|.+++|+|||++|++++++.|.+||+.+.. .... +..+...+..+.|+|++..++.++. +.|++||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~--l~~~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQ--LTHGEGFATDAKLSPKGGFVSFIRG------RNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCB--CCCSSSCEEEEEECTTSSEEEEEET------TEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEE--cccCCcccccccCCCCCCEEEEEeC------CcEEEEecCC
Confidence 4889999999999999999999999998752 2222 3355566888999999988887764 7999999988
Q ss_pred CcEEEEEee-cCc----------------eeEEEEcCCeEEEE---EcC-------------------------------
Q 015198 124 SRCIGEFAF-RSD----------------VRSVKLSRDRIVVV---LEH------------------------------- 152 (411)
Q Consensus 124 ~~~~~~~~~-~~~----------------i~~~~~~~~~~~~~---~dg------------------------------- 152 (411)
++....... ... +..+.|+||++.++ .|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 876654432 221 47899999998777 344
Q ss_pred --eEEEEEcCC-ceeeEEEeccCCCcceEEEccCCCceEEEEecC----CCCeEEEEEcCCcce-EEEecccc----cee
Q 015198 153 --KIYVYSFVD-LKLLHQIETLANLRGLCCLSHHSSTSVLACPGL----QRGQVRIEHFGLNMI-KLINAHDS----HIA 220 (411)
Q Consensus 153 --~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~----~dg~i~i~~~~~~~~-~~~~~~~~----~i~ 220 (411)
.|++||+.+ ++.............+..+.+ +++..|++.+. .+..|++|+...... ..+..+.. .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 889999988 775543322122234556667 77777776432 356788888765443 33444432 456
Q ss_pred EEEecCCCCEEEEEcCCCeEEEEEECC-CCceEEEEeCCCCCcceEEE-EeCCCCCEEEE-EeCCC--cEEEEEccc
Q 015198 221 CFTLTLDGLLLATASTRGTLIRIFNTV-DGTRLQEVRRGVDRAEIYSI-ALSPNVQWLAV-ASDKG--TVHIFSLRV 292 (411)
Q Consensus 221 ~l~~sp~g~~l~s~s~dg~~I~vwd~~-~~~~~~~~~~~~~~~~v~~l-~~spdg~~l~s-~s~dg--~I~vwd~~~ 292 (411)
.++|+|||+++++++.++. ++||.+. +++ ...+.. +...+..+ .|+|||+.|+. ++.++ .++||+++.
T Consensus 341 ~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred ceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 8999999999999999997 7777665 445 556655 55678777 59999997765 44455 899999975
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=8.4e-20 Score=184.44 Aligned_cols=233 Identities=13% Similarity=0.124 Sum_probs=161.7
Q ss_pred eEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc--eEEeecCC--------------CCEEEEEEeccCCeEEEEecCCCC
Q 015198 47 LISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE--TFRRDLKS--------------GGFRIVEMLFRCNILALVGAGDNS 109 (411)
Q Consensus 47 V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~--~~~~~~~~--------------~~~~~~~~~~~~~~~~l~s~~~d~ 109 (411)
+..+.|. |+.++++. ++ | +||+.+++. ........ ....+..+.|+|+..++++. +
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd~~~~~~~--~- 100 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGRGLVVLFT--Q- 100 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTTTEEEEEE--T-
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCCCeEEEEE--C-
Confidence 5567888 66666666 66 8 999988655 22221100 01357888899995555553 2
Q ss_pred CCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCC-----ceeeEEEeccCCCc-------
Q 015198 110 QYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVD-----LKLLHQIETLANLR------- 175 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~-----~~~~~~~~~~~~~~------- 175 (411)
+.|++||+.+++......+...+.+++|+|||+.++ .++.|++||+.+ ++.......+...+
T Consensus 101 ----~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 101 ----GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp ----TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred ----CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 899999999988766666778899999999998877 899999999988 76654333222211
Q ss_pred -----ceEEEccCCCceEEEEecC--------------------------------CCCeEEEEEcCCcceEEEe---cc
Q 015198 176 -----GLCCLSHHSSTSVLACPGL--------------------------------QRGQVRIEHFGLNMIKLIN---AH 215 (411)
Q Consensus 176 -----~~~~~~~~~~~~~l~~~g~--------------------------------~dg~i~i~~~~~~~~~~~~---~~ 215 (411)
....+.++|+++.|+++.. .+..|++|+........+. .|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 0245666777788877541 3456778887765544433 46
Q ss_pred ccceeEEEecCCCCEEEEEcCCC-----eEEEEEECCCCceEEEEeCCCCCc---ceEEEEeCC--CCCEEEEEeCCCcE
Q 015198 216 DSHIACFTLTLDGLLLATASTRG-----TLIRIFNTVDGTRLQEVRRGVDRA---EIYSIALSP--NVQWLAVASDKGTV 285 (411)
Q Consensus 216 ~~~i~~l~~sp~g~~l~s~s~dg-----~~I~vwd~~~~~~~~~~~~~~~~~---~v~~l~~sp--dg~~l~s~s~dg~I 285 (411)
...+..++|+|||++|++++.++ . |++||+.+++....+....+.. .+..++|+| ||++|+++..|+.+
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~-v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~ 335 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECK-VNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWN 335 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEE-EEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSC
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeE-EEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCcc
Confidence 67899999999999999877665 7 9999999984444433211221 246789999 99999999999999
Q ss_pred EEEEcc
Q 015198 286 HIFSLR 291 (411)
Q Consensus 286 ~vwd~~ 291 (411)
+||+++
T Consensus 336 ~l~~~~ 341 (706)
T 2z3z_A 336 HLYLYD 341 (706)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999987
No 147
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=2.4e-19 Score=188.74 Aligned_cols=238 Identities=11% Similarity=0.075 Sum_probs=179.6
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
..+|...+.++.|+++ .+++++. ++.++||.++........ +..+. .+....|++++..++.+. + +.|.+
T Consensus 199 l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~-l~~~~-~~~~~~~SpDG~~la~~~-~-----~~i~~ 269 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRK-HTSFT-DYYPRHLNTDGRRILFSK-G-----GSIYI 269 (1045)
T ss_dssp EECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEE-CCCCC-SSCEEEEEESSSCEEEEE-T-----TEEEE
T ss_pred CcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceE-ecCCC-CcceeeEcCCCCEEEEEe-C-----CEEEE
Confidence 4679999999999998 5666666 899999987642222222 21222 233457888887666654 3 99999
Q ss_pred EECCCCcEEEEEee------------cCceeEEEEc-CCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccC
Q 015198 119 WDDHQSRCIGEFAF------------RSDVRSVKLS-RDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHH 183 (411)
Q Consensus 119 wd~~~~~~~~~~~~------------~~~i~~~~~~-~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (411)
||+...+ +..+.. ...+.+++|+ |+++.++ .++.|++|++.+++... +..+.. ..+..+.++
T Consensus 270 ~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~-~~~~~~~~s 346 (1045)
T 1k32_A 270 FNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLR-IRYVRRGGD 346 (1045)
T ss_dssp ECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSC-EEEEEECSS
T ss_pred ecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCc-ceEEeeeEc
Confidence 9985443 333332 2368999999 9998776 78999999998776443 333322 245677777
Q ss_pred CCceEEEEecCCCCeEE-EEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCc
Q 015198 184 SSTSVLACPGLQRGQVR-IEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRA 262 (411)
Q Consensus 184 ~~~~~l~~~g~~dg~i~-i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~ 262 (411)
++..|++.+ .++.+. +|+........+..|...+..++|+|||++|++++.++. |++||+.+++....+.. |..
T Consensus 347 -dg~~l~~~s-~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~~~ 421 (1045)
T 1k32_A 347 -TKVAFIHGT-REGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--REA 421 (1045)
T ss_dssp -SEEEEEEEE-TTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--SSS
T ss_pred -CCCeEEEEE-CCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--CCC
Confidence 888888755 477788 888777666666678889999999999999999999999 99999999998777766 777
Q ss_pred ceEEEEeCCCCCEEEEEeCCC----------cEEEEEccccc
Q 015198 263 EIYSIALSPNVQWLAVASDKG----------TVHIFSLRVRV 294 (411)
Q Consensus 263 ~v~~l~~spdg~~l~s~s~dg----------~I~vwd~~~~~ 294 (411)
.+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 422 ~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 422 MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 889999999999999887654 89999998875
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=2.7e-19 Score=164.42 Aligned_cols=229 Identities=8% Similarity=-0.013 Sum_probs=162.6
Q ss_pred EEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeE-EEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 49 SVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
.+++++++.+++++. ++.|.+||..+.+....... ........+.+++++. ++++...+ +.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-PDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-SSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec-CCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcE
Confidence 356788888888888 99999999988655444443 2211345677888874 45555555 9999999999998
Q ss_pred EEEEeec-------CceeEEEEcCCeEEEE---E------------cCeEEEEEcCCcee---eEEEeccCCCcceEEEc
Q 015198 127 IGEFAFR-------SDVRSVKLSRDRIVVV---L------------EHKIYVYSFVDLKL---LHQIETLANLRGLCCLS 181 (411)
Q Consensus 127 ~~~~~~~-------~~i~~~~~~~~~~~~~---~------------dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~ 181 (411)
+..+... ..+..++|+|+++.++ . ++.|++||+.+++. +..+..+. .+.++.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~ 154 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPR---QVYLMR 154 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCS---SCCCEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCC---ccccee
Confidence 8877732 2378999999997776 3 38999999988543 33443332 233444
Q ss_pred cCCCceEEEEecCCCCeEEEEEcCC-cceEEEeccc--------------------------------------------
Q 015198 182 HHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINAHD-------------------------------------------- 216 (411)
Q Consensus 182 ~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~-------------------------------------------- 216 (411)
+++++. +++.+ +.|.+|+... +.+..+..+.
T Consensus 155 ~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 155 AADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp ECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred ECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 555666 44332 3388877643 3333332221
Q ss_pred ------------------------cceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCC
Q 015198 217 ------------------------SHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP 271 (411)
Q Consensus 217 ------------------------~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp 271 (411)
..+..++|+| +|++|+++ ++. |++||+.+++.+..+.. ...+.+++|+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~---~~~~~~~~~s~ 304 (349)
T 1jmx_B 231 LLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANL---DHTYYCVAFDK 304 (349)
T ss_dssp EEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEEC---SSCCCEEEECS
T ss_pred cceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcC---CCCccceEECC
Confidence 1345677889 99999888 788 99999999998888774 23577899999
Q ss_pred CCCEEEEEeCCCcEEEEEccccccC
Q 015198 272 NVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 272 dg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+|++|++++.++.|++||+++++..
T Consensus 305 dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 305 KGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp SSSCEEEESBSSEEEEEETTTTEEE
T ss_pred CCCEEEEecCCCeEEEEecccccee
Confidence 9999988888999999999988755
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1e-17 Score=154.26 Aligned_cols=281 Identities=12% Similarity=0.061 Sum_probs=174.5
Q ss_pred EEEEEe-----CCcEEEEecCCCcceEEe-ecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcE--EEE
Q 015198 58 CFAAGT-----SCGFRIYNCEPFKETFRR-DLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRC--IGE 129 (411)
Q Consensus 58 ~la~g~-----dg~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~--~~~ 129 (411)
.+++|+ ++.|.+|.++.....+.. ....+......+.|+|++.+++++..+ .++.|.+|++.+++. +..
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~ 80 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNT 80 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeee
Confidence 455553 567888888753222211 111233345567889988755444320 128999999977653 333
Q ss_pred Ee-ecCceeEEEEcCCeEEEE----EcCeEEEEEcC-Cc--eeeEEEeccCC-------CcceEEEccCCCceEEEEecC
Q 015198 130 FA-FRSDVRSVKLSRDRIVVV----LEHKIYVYSFV-DL--KLLHQIETLAN-------LRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 130 ~~-~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~-~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~g~ 194 (411)
+. +...+..++|+|++++++ .++.|.+|++. ++ +.+..+..... ......+.+++++. +++++.
T Consensus 81 ~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~ 159 (347)
T 3hfq_A 81 VVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDL 159 (347)
T ss_dssp EEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEET
T ss_pred eecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeC
Confidence 23 677889999999998665 46899999995 33 33333322111 11244566666777 555566
Q ss_pred CCCeEEEEEcC-CcceEE---Eecc-ccceeEEEecCCCCEEEE-EcCCCeEEEEEECCC--Cce--EEEEeCCCC----
Q 015198 195 QRGQVRIEHFG-LNMIKL---INAH-DSHIACFTLTLDGLLLAT-ASTRGTLIRIFNTVD--GTR--LQEVRRGVD---- 260 (411)
Q Consensus 195 ~dg~i~i~~~~-~~~~~~---~~~~-~~~i~~l~~sp~g~~l~s-~s~dg~~I~vwd~~~--~~~--~~~~~~~~~---- 260 (411)
.++.|.+|+.. ...+.. +..+ ...+..++|+|+|++|++ ...++. |++|++.. ++. +..+.....
T Consensus 160 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 238 (347)
T 3hfq_A 160 GSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQ-IASLKYDTQTGAFTQLGIVKTIPADYTA 238 (347)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEEETTTTEEEEEEEEESSCTTCCS
T ss_pred CCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCceEEeeeeeecCCCCCC
Confidence 78899998876 322222 2222 335778999999996665 556777 99999874 543 223332111
Q ss_pred CcceEEEEeCCCCCEEE-EEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccc
Q 015198 261 RAEIYSIALSPNVQWLA-VASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMR 339 (411)
Q Consensus 261 ~~~v~~l~~spdg~~l~-s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (411)
...+..++|+|||++|+ +...++.|.+|+++......
T Consensus 239 ~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~------------------------------------------ 276 (347)
T 3hfq_A 239 HNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLT------------------------------------------ 276 (347)
T ss_dssp CCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEE------------------------------------------
T ss_pred CCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEE------------------------------------------
Confidence 13588999999999874 55568999999997432110
Q ss_pred cccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeC-CcEEEEEEecCCCCcEEE
Q 015198 340 GVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMD-GSFYRCSFDPVHGGEMLQ 397 (411)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d-g~~~~~~~~~~~~~~~~~ 397 (411)
....+.........++|+++ +.|++++.+ +.+.+|.++.+.| +...
T Consensus 277 -----------~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg-~l~~ 324 (347)
T 3hfq_A 277 -----------LIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSG-KLSL 324 (347)
T ss_dssp -----------EEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTC-CEEE
T ss_pred -----------EeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCC-eEEe
Confidence 01122222223456789999 457777765 8999999987655 4443
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=1.4e-18 Score=182.78 Aligned_cols=238 Identities=12% Similarity=-0.012 Sum_probs=178.6
Q ss_pred CCCCeEEEEEc-CCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCE-EEEEEeccCCeEEEEecCCCCCCCCCeEE-EE
Q 015198 43 DEIELISVSWN-QDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGF-RIVEMLFRCNILALVGAGDNSQYPPTKVI-IW 119 (411)
Q Consensus 43 h~~~V~~l~~s-~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~s~~~d~~~~d~~i~-vw 119 (411)
|...|.+++|+ |||++|+++.++.+.+|+...... .. +..+.. .+..+.|+ ++..++.++.+ ..+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~-~~--~~~~~~~~~~~~~~s-dg~~l~~~s~~-----~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYV-LK--VPEPLRIRYVRRGGD-TKVAFIHGTRE-----GDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBE-EE--CSCCSCEEEEEECSS-SEEEEEEEETT-----EEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCce-EE--ccCCCcceEEeeeEc-CCCeEEEEECC-----CceEEEE
Confidence 44579999999 999999999999999999886442 22 334444 78889999 99888777666 8899 99
Q ss_pred ECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC-
Q 015198 120 DDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ- 195 (411)
Q Consensus 120 d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~- 195 (411)
|+.+++......+...+..++|+||++.++ .++.|++||+.+++....+..+...+.. ++++|++.+|++++..
T Consensus 365 d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~--~~~SpDG~~la~~~~~~ 442 (1045)
T 1k32_A 365 DYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD--FTISDNSRFIAYGFPLK 442 (1045)
T ss_dssp ETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCC--EEECTTSCEEEEEEEEC
T ss_pred ECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccc--eEECCCCCeEEEEecCc
Confidence 988876554334667899999999998887 5789999999999888777666664444 4556667778775432
Q ss_pred --------CCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce----------------
Q 015198 196 --------RGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR---------------- 251 (411)
Q Consensus 196 --------dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~---------------- 251 (411)
++.|++|+........+..|...+..++|+|+|++|+.++.++. ..+|+......
T Consensus 443 ~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (1045)
T 1k32_A 443 HGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL-DPSPDRVVLNFSFEVVSKPFVIPLIPG 521 (1045)
T ss_dssp SSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCC-CCEECSSSSCEECCSCBEEEEEESSTT
T ss_pred cccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccC-CcCcchhccccccccCceeEEEEeCCC
Confidence 25899999887767778888888999999999999999988777 77776432211
Q ss_pred ---------------------------EEEEeCCCCCcceEEEEeCCCCCEEEE-------------EeCCCcEEEEEcc
Q 015198 252 ---------------------------LQEVRRGVDRAEIYSIALSPNVQWLAV-------------ASDKGTVHIFSLR 291 (411)
Q Consensus 252 ---------------------------~~~~~~~~~~~~v~~l~~spdg~~l~s-------------~s~dg~I~vwd~~ 291 (411)
+..+.. +...+..++++|||+++++ ......|++||+.
T Consensus 522 ~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~--~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~ 599 (1045)
T 1k32_A 522 SPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINV--DPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVK 599 (1045)
T ss_dssp CCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSC--CCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETT
T ss_pred CCCccccCcCccccccccccccCHhHceEEcCC--CCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECC
Confidence 111111 4467889999999987775 1224468888887
Q ss_pred ccc
Q 015198 292 VRV 294 (411)
Q Consensus 292 ~~~ 294 (411)
+++
T Consensus 600 ~~~ 602 (1045)
T 1k32_A 600 TRK 602 (1045)
T ss_dssp TCC
T ss_pred CCc
Confidence 765
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=1.7e-17 Score=152.69 Aligned_cols=228 Identities=10% Similarity=0.069 Sum_probs=168.7
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCC-------EEEEEEeccCCeEEE-Eec-CCCCCCCC
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGG-------FRIVEMLFRCNILAL-VGA-GDNSQYPP 113 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l-~s~-~~d~~~~d 113 (411)
..+..++|+|+|++++++. ++.|.+||.++.+........... .....+.+++++..+ ++. +.+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~----- 163 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE----- 163 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-----
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-----
Confidence 4477899999999776655 799999999886655554442211 236678888876433 333 344
Q ss_pred CeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCC--CcceEEEccCCCce
Q 015198 114 TKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLAN--LRGLCCLSHHSSTS 187 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 187 (411)
+.|.+||..+++.+..+. +...+..+.|+|++..++ .++.|.+||+.+++.+..+..... ......+.+++++.
T Consensus 164 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 243 (353)
T 3vgz_A 164 SVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ 243 (353)
T ss_dssp CEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT
T ss_pred ceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC
Confidence 899999999999998888 666789999999987665 678999999999998888765221 12344456666666
Q ss_pred EEEEecCCCCeEEEEEcCC-cceEEEeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceE
Q 015198 188 VLACPGLQRGQVRIEHFGL-NMIKLINAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIY 265 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~-~~~~~~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~ 265 (411)
.++++...++.|.+|+... +.+..+.... ...++|+|+|+++++++ .++. |.+||+.+++.+..+.. ...+.
T Consensus 244 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~-v~~~d~~~~~~~~~~~~---~~~~~ 317 (353)
T 3vgz_A 244 RAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGK-VSVIDAKSYKVVKTFDT---PTHPN 317 (353)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEEEEC---CSEEE
T ss_pred EEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCe-EEEEECCCCeEEEEEec---CCCCC
Confidence 6666666679999988754 4455555433 25799999999665554 6888 99999999999888875 33689
Q ss_pred EEEeCCCCCEEEEEeCCC
Q 015198 266 SIALSPNVQWLAVASDKG 283 (411)
Q Consensus 266 ~l~~spdg~~l~s~s~dg 283 (411)
+++|+|||++|+++..++
T Consensus 318 ~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 318 SLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEECTTSCEEEEEEECC
T ss_pred eEEEcCCCCEEEEEEccc
Confidence 999999999887776654
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.81 E-value=4.8e-18 Score=171.99 Aligned_cols=240 Identities=9% Similarity=-0.024 Sum_probs=162.6
Q ss_pred CeEEEEEcCCCCEEEEEe-C---------CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 46 ELISVSWNQDYGCFAAGT-S---------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~-d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
.|.+++|+|||++|+++. + +.+.+||+++.+.........+...+..+.|+|++..++.++. +.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------~~ 135 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------NN 135 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET------TE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC------Ce
Confidence 499999999999999987 4 6788999987554211111223334667889999987777665 79
Q ss_pred EEEEECCCCcEEEEEe-ecCce------------------eEEEEcCCeEEEE---EcC---------------------
Q 015198 116 VIIWDDHQSRCIGEFA-FRSDV------------------RSVKLSRDRIVVV---LEH--------------------- 152 (411)
Q Consensus 116 i~vwd~~~~~~~~~~~-~~~~i------------------~~~~~~~~~~~~~---~dg--------------------- 152 (411)
|++||+.+++...... +...+ .++.|+|||+.++ .++
T Consensus 136 i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 136 IYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 9999999988776555 23333 7899999998877 232
Q ss_pred -------------eEEEEEcCCceeeEEEeccC----CCcceEEEccCCCceEEEEecC---CCCeEEEEEcCCcce-EE
Q 015198 153 -------------KIYVYSFVDLKLLHQIETLA----NLRGLCCLSHHSSTSVLACPGL---QRGQVRIEHFGLNMI-KL 211 (411)
Q Consensus 153 -------------~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~g~---~dg~i~i~~~~~~~~-~~ 211 (411)
.|++||+.+++....+..+. ....+..+.++|+++++++... .+..|++|+...... ..
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 79999998887655555431 1234566777788887765432 345677888765443 33
Q ss_pred Eec-ccccee----EEEecCCCCEEEE--EcCCC------eEEEEEE-CCCCce--EEEEeCCCCCcceEE-EEeCCCCC
Q 015198 212 INA-HDSHIA----CFTLTLDGLLLAT--ASTRG------TLIRIFN-TVDGTR--LQEVRRGVDRAEIYS-IALSPNVQ 274 (411)
Q Consensus 212 ~~~-~~~~i~----~l~~sp~g~~l~s--~s~dg------~~I~vwd-~~~~~~--~~~~~~~~~~~~v~~-l~~spdg~ 274 (411)
+.. +...+. .++|+|||+.|+. +..++ . |++|| ...++. ...+.. +...+.. ++|+|||+
T Consensus 296 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~-l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg~ 372 (723)
T 1xfd_A 296 HEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH-ITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKGN 372 (723)
T ss_dssp EEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE-EEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTTT
T ss_pred EEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE-EEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCCC
Confidence 333 344443 7899999997664 45566 4 77777 344441 334443 2234444 69999999
Q ss_pred EEEEEeCC---CcEEEEEccccc
Q 015198 275 WLAVASDK---GTVHIFSLRVRV 294 (411)
Q Consensus 275 ~l~s~s~d---g~I~vwd~~~~~ 294 (411)
.|+..+.+ +.++||+++...
T Consensus 373 ~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 373 KIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp EEEEEESSSCTTCCEEEEECSST
T ss_pred EEEEEEcCCCCcceEEEEEeCCC
Confidence 99866655 789999997643
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=1.2e-17 Score=154.60 Aligned_cols=238 Identities=13% Similarity=0.106 Sum_probs=156.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-C----CcEEEEecCCC--cceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCe
Q 015198 43 DEIELISVSWNQDYGCFAAGT-S----CGFRIYNCEPF--KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTK 115 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~-d----g~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~ 115 (411)
+...+..++|+|||++|++++ + +.|.+|+++.. ..........+......+.+ ....++++...+ +.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~-dg~~l~~~~~~~-----~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT-NGKNIVTANYSG-----GS 121 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE-CSSEEEEEETTT-----TE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE-CCCEEEEEECCC-----CE
Confidence 667788899999999999888 4 79999998763 22222222223334455555 333444444444 99
Q ss_pred EEEEECCCCcEEE----EEee-----------cCceeEEEEcCCeEEEE----EcCeEEEEEcCCce-------ee----
Q 015198 116 VIIWDDHQSRCIG----EFAF-----------RSDVRSVKLSRDRIVVV----LEHKIYVYSFVDLK-------LL---- 165 (411)
Q Consensus 116 i~vwd~~~~~~~~----~~~~-----------~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~-------~~---- 165 (411)
|.+|++.....+. .+.+ ...+.+++|+|++++++ .++.|++|++.... ..
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 9999987543321 1222 12357899999997554 37899999986533 21
Q ss_pred -EEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceE---EEe---ccccceeEEEecCCCCEEEEEcCC-
Q 015198 166 -HQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIK---LIN---AHDSHIACFTLTLDGLLLATASTR- 237 (411)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~---~~~---~~~~~i~~l~~sp~g~~l~s~s~d- 237 (411)
..+.... ......+.++++++++++++..++.|.+|+.....+. .+. .+......++|+|||++|+++..+
T Consensus 202 ~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~ 280 (361)
T 3scy_A 202 PEAFKVAP-GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK 280 (361)
T ss_dssp EEEEECCT-TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS
T ss_pred ccceecCC-CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC
Confidence 1222211 2234567777888877776667899999887643332 222 223446799999999988776654
Q ss_pred -CeEEEEEECC--CCc--eEEEEeCCCCCcceEEEEeCCCCCEEEEEe-CCCcEEEEEcc
Q 015198 238 -GTLIRIFNTV--DGT--RLQEVRRGVDRAEIYSIALSPNVQWLAVAS-DKGTVHIFSLR 291 (411)
Q Consensus 238 -g~~I~vwd~~--~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~s~s-~dg~I~vwd~~ 291 (411)
+. |.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|+++
T Consensus 281 ~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 281 ADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp SCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 77 9999985 455 3334442 33678999999999988887 67889997665
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=7.9e-18 Score=156.29 Aligned_cols=242 Identities=11% Similarity=0.084 Sum_probs=163.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCcEEEEecC-CCcceEEeecCCCCEEEEEEeccCCeE--EEEecC-------------
Q 015198 43 DEIELISVSWNQDYGCFAAGTSCGFRIYNCE-PFKETFRRDLKSGGFRIVEMLFRCNIL--ALVGAG------------- 106 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~dg~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~s~~------------- 106 (411)
....+..++|+|+|++|++++.+.|.+|+++ +.+.........+. ....+.++|++. +++++.
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g-~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG-HPRANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS-SGGGGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCC-CCccEEECCCCCEEEEEEecCCcceeccceeec
Confidence 3456889999999999998883399999997 54332211111111 133477899887 344543
Q ss_pred CCCCCCCCeEEEEECC-CCcEEEEEe-----ecCceeEEEEcCCeEEEE----EcCeEEEEEcC-Cceee--EEEeccCC
Q 015198 107 DNSQYPPTKVIIWDDH-QSRCIGEFA-----FRSDVRSVKLSRDRIVVV----LEHKIYVYSFV-DLKLL--HQIETLAN 173 (411)
Q Consensus 107 ~d~~~~d~~i~vwd~~-~~~~~~~~~-----~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~-~~~~~--~~~~~~~~ 173 (411)
.+ +.+.+|++. +++....+. +...+.+++|+|++++++ .++.|++||+. +++.. ..+.....
T Consensus 117 ~~-----g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 117 FA-----GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp SC-----CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred CC-----ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 34 899999987 466554443 346789999999997665 25799999998 67653 23332111
Q ss_pred CcceEEEccCCCceEEEEecCCCCeEEEEEcC---Ccce---EEEec-------ccc------ceeEEE-ecCCCCEEEE
Q 015198 174 LRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG---LNMI---KLINA-------HDS------HIACFT-LTLDGLLLAT 233 (411)
Q Consensus 174 ~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~---~~~~---~~~~~-------~~~------~i~~l~-~sp~g~~l~s 233 (411)
......+.++++++++++++..++.|.+|+.+ ++.. ..+.. |.. .+..++ |+|||++|++
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 22456677778888887766667899997654 2221 12221 122 578999 9999998887
Q ss_pred EcCCC------eEEEEEECC-CCceEEE---EeCCCCCcceEEEEeCC---CCCEEEEEeCC-CcEEEEEcccc
Q 015198 234 ASTRG------TLIRIFNTV-DGTRLQE---VRRGVDRAEIYSIALSP---NVQWLAVASDK-GTVHIFSLRVR 293 (411)
Q Consensus 234 ~s~dg------~~I~vwd~~-~~~~~~~---~~~~~~~~~v~~l~~sp---dg~~l~s~s~d-g~I~vwd~~~~ 293 (411)
++.+. . |.+|++. +++.... +.. +...+..++|+| ||++|++++.+ +.|.||+++..
T Consensus 272 ~~~~~~~~~~~~-i~v~~~~~~g~~~~~~~~~~~--~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 272 SSRANKFELQGY-IAGFKLRDCGSIEKQLFLSPT--PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEESSTTSCCE-EEEEEECTTSCEEEEEEEEEC--SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ECCCCCCCCCCe-EEEEEECCCCCEEEeeeeeec--CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 65432 7 9999996 6665432 322 333466789999 89999998865 89999999865
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=4.9e-18 Score=158.69 Aligned_cols=245 Identities=9% Similarity=-0.062 Sum_probs=157.9
Q ss_pred cCCCCCCeEE-----EEEcCCCCEEEEEe--CCc--EEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCC
Q 015198 40 SDVDEIELIS-----VSWNQDYGCFAAGT--SCG--FRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQ 110 (411)
Q Consensus 40 ~~~h~~~V~~-----l~~s~~g~~la~g~--dg~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~ 110 (411)
+..|...... .+|+|||++|+.++ ++. |.+||+++.+... . ...+...+....|+|++..|+....+
T Consensus 26 lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-l-t~~~~~~~~~~~~spdg~~l~~~~~~-- 101 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-L-TEGRGDNTFGGFLSPDDDALFYVKDG-- 101 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-C-CCSSCBCSSSCEECTTSSEEEEEETT--
T ss_pred ecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-e-eeCCCCCccceEEcCCCCEEEEEeCC--
Confidence 4445555555 88999999999877 453 7777877644322 2 22333333356799999877777766
Q ss_pred CCCCeEEEEECCCCcEEEEEee-cCceeEE--EEcCCeEEEE-------------------------EcCeEEEEEcCCc
Q 015198 111 YPPTKVIIWDDHQSRCIGEFAF-RSDVRSV--KLSRDRIVVV-------------------------LEHKIYVYSFVDL 162 (411)
Q Consensus 111 ~~d~~i~vwd~~~~~~~~~~~~-~~~i~~~--~~~~~~~~~~-------------------------~dg~i~iwd~~~~ 162 (411)
+.|++||+.+++....+.. ...+... .+++++..++ .+..|++||+.++
T Consensus 102 ---~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g 178 (388)
T 3pe7_A 102 ---RNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTG 178 (388)
T ss_dssp ---TEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTC
T ss_pred ---CeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCC
Confidence 8999999999988776663 3334333 3488888776 1267999999988
Q ss_pred eeeEEEeccCCCcceEEEccCC-CceEEEEecCC-----CCeEEEEEcCCcceEEEeccc--cceeEEEecCCCCEEEEE
Q 015198 163 KLLHQIETLANLRGLCCLSHHS-STSVLACPGLQ-----RGQVRIEHFGLNMIKLINAHD--SHIACFTLTLDGLLLATA 234 (411)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~g~~-----dg~i~i~~~~~~~~~~~~~~~--~~i~~l~~sp~g~~l~s~ 234 (411)
+...... +.. ....+.++| ++..|++.... ...|.+++..+.....+..+. ..+..++|+|||+.|+..
T Consensus 179 ~~~~l~~-~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 179 ESTVILQ-ENQ--WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYV 255 (388)
T ss_dssp CEEEEEE-ESS--CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEE
T ss_pred ceEEeec-CCc--cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEE
Confidence 6554443 333 345566677 77777765432 336777777666666665554 357789999999977654
Q ss_pred cC-C----CeEEEEEECCCCceEEEEeCCCCCcc---eEEEEeCCCCCEEEEE---------eCCCcEEEEEcccccc
Q 015198 235 ST-R----GTLIRIFNTVDGTRLQEVRRGVDRAE---IYSIALSPNVQWLAVA---------SDKGTVHIFSLRVRVV 295 (411)
Q Consensus 235 s~-d----g~~I~vwd~~~~~~~~~~~~~~~~~~---v~~l~~spdg~~l~s~---------s~dg~I~vwd~~~~~~ 295 (411)
+. + .. |++||+.+++.........+... ...+.|+|||+.|+.. ..+..|++||+.+++.
T Consensus 256 ~~~~~~~~~~-l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 256 SYLKGSPDRF-IYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp EEETTCCCEE-EEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred ecCCCCCcce-EEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 43 2 24 99999999875332221101000 1123799999988754 4456899999988764
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=183.92 Aligned_cols=241 Identities=10% Similarity=-0.003 Sum_probs=159.0
Q ss_pred EEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCE---EEEEEeccCCeEEEEecCCCCC----CCCCeEEEEEC
Q 015198 49 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGF---RIVEMLFRCNILALVGAGDNSQ----YPPTKVIIWDD 121 (411)
Q Consensus 49 ~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~s~~~d~~----~~d~~i~vwd~ 121 (411)
+++|+|||++++.+.|+.|++||+.+.+...... .+.. .+..+.|+||+..++.++.... ..++.|++||+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILS--NRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEEC--HHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEc--cccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 7899999976666559999999998865433221 2211 2678889999987776654100 00289999999
Q ss_pred CCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEec-cCCCc---------------ceEEEccC
Q 015198 122 HQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIET-LANLR---------------GLCCLSHH 183 (411)
Q Consensus 122 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~-~~~~~---------------~~~~~~~~ 183 (411)
.+++.+........+..++|+|||+.++ .++.|++||+.+++....... +...+ ....+.++
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred CCCccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 9887632122346788999999998887 899999999988776543211 11100 01256777
Q ss_pred CCceEEEEecCCCC---------------------------------eEEEEEcCCcceE---E------EeccccceeE
Q 015198 184 SSTSVLACPGLQRG---------------------------------QVRIEHFGLNMIK---L------INAHDSHIAC 221 (411)
Q Consensus 184 ~~~~~l~~~g~~dg---------------------------------~i~i~~~~~~~~~---~------~~~~~~~i~~ 221 (411)
|+++.|++....++ .|++|+....... . +.+|...+..
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 78888887543221 6677887665431 1 2357888999
Q ss_pred EEecCCCCEEEEEcC--C--CeEEEEEE----CCCCceEEEE----eCCCCCcceE-----EEEeCCCCCEEEE--EeCC
Q 015198 222 FTLTLDGLLLATAST--R--GTLIRIFN----TVDGTRLQEV----RRGVDRAEIY-----SIALSPNVQWLAV--ASDK 282 (411)
Q Consensus 222 l~~sp~g~~l~s~s~--d--g~~I~vwd----~~~~~~~~~~----~~~~~~~~v~-----~l~~spdg~~l~s--~s~d 282 (411)
++|+||++++++... + .. |++|| +.+++....+ .. +...+. .+.|+|||+.|+. ...+
T Consensus 258 ~~~SpD~~~~~~~~~~~~~~~~-l~~~d~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 334 (719)
T 1z68_A 258 LTWVTDERVCLQWLKRVQNVSV-LSICDFREDWQTWDCPKTQEHIEES--RTGWAGGFFVSTPVFSYDAISYYKIFSDKD 334 (719)
T ss_dssp EEESSSSEEEEEEEESSTTEEE-EEEEEECSSSSSEECCGGGEEEEEC--SSSCSSSSSCCCCEECTTSSCEEEEEECTT
T ss_pred eEEeCCCeEEEEEeccccCeEE-EEEEcccCCCCCCceEEEEeccccc--CCceEccccCCccEECCCCCeEEEEEEccC
Confidence 999999887776432 2 34 88899 7777654333 23 445555 7899999996654 4456
Q ss_pred Cc--EEEEEccccc
Q 015198 283 GT--VHIFSLRVRV 294 (411)
Q Consensus 283 g~--I~vwd~~~~~ 294 (411)
|. |++|++.+++
T Consensus 335 g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 335 GYKHIHYIKDTVEN 348 (719)
T ss_dssp SCEEEEEESSCSTT
T ss_pred CceEEEEEECCCCc
Confidence 64 6666665544
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=3.4e-16 Score=139.93 Aligned_cols=243 Identities=14% Similarity=0.179 Sum_probs=176.0
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec----CCCCEEEEEEec-cCCeEEEEecCC-CCCCC
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL----KSGGFRIVEMLF-RCNILALVGAGD-NSQYP 112 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~l~s~~~-d~~~~ 112 (411)
..++-..+.+++++++++++++.. ++.|.+|+.+. +....... ..+......+.+ .+++.++++... +
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~---- 99 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT---- 99 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG----
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC----
Confidence 345667899999999999888877 89999999773 33222211 012234667777 467777766542 4
Q ss_pred CCeEEEEECCCCcEEEEEe--ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCce
Q 015198 113 PTKVIIWDDHQSRCIGEFA--FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTS 187 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (411)
+.|.+|| .+++.+..+. ....+.++++++++.+++ .++.|++||. +++.+..+...........+..++++.
T Consensus 100 -~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 100 -HQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp -CEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSE
T ss_pred -CEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCC
Confidence 8999999 6788777775 345789999999998776 3688999995 456666664322222456677777777
Q ss_pred EEEEecCCCCeEEEEEcCCcceEEEecc--ccceeEEEecCCCCEEEEEcCCC-eEEEEEECCCCceEEEEeCCCCCcce
Q 015198 188 VLACPGLQRGQVRIEHFGLNMIKLINAH--DSHIACFTLTLDGLLLATASTRG-TLIRIFNTVDGTRLQEVRRGVDRAEI 264 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~~~~~~~~~~--~~~i~~l~~sp~g~~l~s~s~dg-~~I~vwd~~~~~~~~~~~~~~~~~~v 264 (411)
++++ ...++.|++|+..++.+..+..+ ...+..++++++|+++++...++ . |.+||. +++.+..+..+.....+
T Consensus 177 l~v~-~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 177 IFIS-DNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp EEEE-EGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEESSCCSCE
T ss_pred EEEE-ECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEcccCCCCcc
Confidence 6554 45688999999888777766543 35788999999999888887776 8 999995 67777777653333457
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 265 YSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 265 ~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.+++++|+|+++++ +.|++|++|++....
T Consensus 254 ~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 254 FDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred eeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 89999999987766 678999999986643
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.79 E-value=2.3e-17 Score=151.47 Aligned_cols=228 Identities=9% Similarity=0.025 Sum_probs=162.4
Q ss_pred EeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC--ceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeE
Q 015198 93 MLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS--DVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLH 166 (411)
Q Consensus 93 ~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~ 166 (411)
+.+.+++.++++++.+ +.|.+||+.+++.+..+.... .+..++|+|++..++ .++.|++||+.+++.+.
T Consensus 5 ~~~~~~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp CCCCTTCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccccCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE
Confidence 3466777888887777 999999999999988888555 788999999986443 47899999999998887
Q ss_pred EEeccCCC----cceEEEccCCCceEEEEecCC-----------CCeEEEEEcCCc----ceEEEeccccceeEEEecCC
Q 015198 167 QIETLANL----RGLCCLSHHSSTSVLACPGLQ-----------RGQVRIEHFGLN----MIKLINAHDSHIACFTLTLD 227 (411)
Q Consensus 167 ~~~~~~~~----~~~~~~~~~~~~~~l~~~g~~-----------dg~i~i~~~~~~----~~~~~~~~~~~i~~l~~sp~ 227 (411)
.+.....+ .....+.++++++.+++++.. ++.|.+|+.... .+..+. +...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCC
Confidence 77643221 112344556667777765422 489999887642 223333 3446889999999
Q ss_pred CCEEEEEcCCCeEEEEEECCCCceEEEEeCCCC-----------------------------------------------
Q 015198 228 GLLLATASTRGTLIRIFNTVDGTRLQEVRRGVD----------------------------------------------- 260 (411)
Q Consensus 228 g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~----------------------------------------------- 260 (411)
|+ +++++ +. |++||+.+++.+..+..+..
T Consensus 159 g~-l~~~~--~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 159 GS-LYVAG--PD-IYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp SC-EEEES--SS-EEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred Cc-EEEcc--Cc-EEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 99 55554 45 99999999988777654210
Q ss_pred -------------------CcceEEEEeCC-CCCEEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCc
Q 015198 261 -------------------RAEIYSIALSP-NVQWLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFD 320 (411)
Q Consensus 261 -------------------~~~v~~l~~sp-dg~~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (411)
...+..++|+| |+++|+++ ++.|++||+.+++...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~----------------------- 289 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK----------------------- 289 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE-----------------------
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE-----------------------
Confidence 01345677889 99999888 8899999998876431
Q ss_pred cccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 321 TLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.+..+. ....++|+++ +.|++++.+|.+++|....
T Consensus 290 ---------------------------------~~~~~~-~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 290 ---------------------------------AANLDH-TYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ---------------------------------EEECSS-CCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ---------------------------------EEcCCC-CccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 222222 2335789998 6788877789999998754
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=6.4e-17 Score=149.74 Aligned_cols=279 Identities=15% Similarity=0.090 Sum_probs=171.0
Q ss_pred CCEEEEEe-----CCcEEEEecCCC--cceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC--CcE
Q 015198 56 YGCFAAGT-----SCGFRIYNCEPF--KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ--SRC 126 (411)
Q Consensus 56 g~~la~g~-----dg~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~--~~~ 126 (411)
..++++|+ ++.|.+|.++.. +......+ +......+.|+|++..+++++.+. ..++.|.+|++.. ++.
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~-~~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFS-KDQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCS-STTCEEEEEEEETTTTEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccC-CCCCcEEEEEEeCCCCcE
Confidence 34566664 568999988642 22222211 333444577888886555554420 0127999998765 433
Q ss_pred E--EEEe-ecCceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeE----EEeccC-C-------CcceEEEccCCCce
Q 015198 127 I--GEFA-FRSDVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLH----QIETLA-N-------LRGLCCLSHHSSTS 187 (411)
Q Consensus 127 ~--~~~~-~~~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~----~~~~~~-~-------~~~~~~~~~~~~~~ 187 (411)
. .... +......+++ ++..++ .++.|.+|++.....+. .+.... . ......+.++|+++
T Consensus 90 ~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~ 167 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGK 167 (361)
T ss_dssp EEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSS
T ss_pred EEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCC
Confidence 2 2233 3456777788 544443 47899999996543221 111110 0 11234566777888
Q ss_pred EEEEecCCCCeEEEEEcCCcc-------e-------EEEeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCce-
Q 015198 188 VLACPGLQRGQVRIEHFGLNM-------I-------KLINAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTR- 251 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~~~-------~-------~~~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~- 251 (411)
++++++..++.|.+|+..... + .....+......++|+|+|++|++++ .++. |.+||+.+++.
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g~~~ 246 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADGMLD 246 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETTEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCCceE
Confidence 777767678899998765322 1 11223455678999999999887776 5788 99999987754
Q ss_pred -EEEEeCC-CCCcceEEEEeCCCCCEEEEEeCC--CcEEEEEccc--cccCCCCCCCCCCCCcccccccCCCCCccccCC
Q 015198 252 -LQEVRRG-VDRAEIYSIALSPNVQWLAVASDK--GTVHIFSLRV--RVVGEDSSSSLSTPSQSTELLNHSSSFDTLISP 325 (411)
Q Consensus 252 -~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~d--g~I~vwd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (411)
+..+... .+...+..++|+|||++|+++..+ +.|.+|+++. ++..
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~----------------------------- 297 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLT----------------------------- 297 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEE-----------------------------
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEE-----------------------------
Confidence 3333321 123456899999999998776654 7899999973 2211
Q ss_pred CCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEE-eCCcEEEEEEecCCCCcEE
Q 015198 326 STGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVS-MDGSFYRCSFDPVHGGEML 396 (411)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~dg~~~~~~~~~~~~~~~~ 396 (411)
....+.. ......++|+++ +.|++++ .++.+.+|.++.+.| +..
T Consensus 298 -------------------------~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g-~~~ 343 (361)
T 3scy_A 298 -------------------------KVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG-LLT 343 (361)
T ss_dssp -------------------------EEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC-CEE
T ss_pred -------------------------EeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC-cEe
Confidence 0112222 123345789999 4577777 469999999997554 443
No 160
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=3.1e-17 Score=155.65 Aligned_cols=169 Identities=14% Similarity=0.129 Sum_probs=123.9
Q ss_pred CeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCce----------eeEEEe---ccCCCcceE
Q 015198 114 TKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLK----------LLHQIE---TLANLRGLC 178 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~----------~~~~~~---~~~~~~~~~ 178 (411)
+.+++|+... . .....+..+++++++.+++ ....+++|+..... .+.... .......+.
T Consensus 23 ~~vri~~~~~-~-----~~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPE-E-----LPKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCS-S-----CCCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCcc-c-----cCCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 5677776321 1 1234578888988776666 43448888753110 000000 001112466
Q ss_pred EEccCCCceEEEE---ecCCCCeEEEEEcCCc------------ceEEEeccccceeEEEecCC-CCEEEEEcCCCeEEE
Q 015198 179 CLSHHSSTSVLAC---PGLQRGQVRIEHFGLN------------MIKLINAHDSHIACFTLTLD-GLLLATASTRGTLIR 242 (411)
Q Consensus 179 ~~~~~~~~~~l~~---~g~~dg~i~i~~~~~~------------~~~~~~~~~~~i~~l~~sp~-g~~l~s~s~dg~~I~ 242 (411)
++++++++.+|++ +|+.|+.|+||+.... ....+.+|...|.+++|+|+ +.+|++++.||. |+
T Consensus 97 ~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~-v~ 175 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS-IA 175 (434)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-EE
T ss_pred EEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-EE
Confidence 7777788888885 6889999999986532 13455679999999999998 889999999999 99
Q ss_pred EEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 243 IFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 243 vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
+||++++..+..... |...|.+++|+|+|++|++|+.||.|++||++
T Consensus 176 iwD~~~~~~~~~~~~--~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 176 VLQVTETVKVCATLP--STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEESSSEEEEEEEC--GGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EEEcCCCcceeeccC--CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 999999877666655 77899999999999999999999999999998
No 161
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=2.9e-16 Score=148.91 Aligned_cols=237 Identities=14% Similarity=0.098 Sum_probs=160.2
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcc---------eEE-----eecCCCCEEEEEEeccCCeEEEE----e
Q 015198 44 EIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKE---------TFR-----RDLKSGGFRIVEMLFRCNILALV----G 104 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~---------~~~-----~~~~~~~~~~~~~~~~~~~~~l~----s 104 (411)
...++.+++++++.++++++ ++ ++||+...... ... ..+ .+...+.++.|++++..++ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLV-PMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEE-CCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccc-cCCCcccEEEEcCCCCEEEEEEec
Confidence 44689999999999999999 55 99987642110 000 001 2334588999999998888 7
Q ss_pred cCCCCCCCCCeEEEEECCCC--------cEE---EEEe-ecCceeEEEEcCC-eEEEE---EcCeEEEEEcCCceeeEEE
Q 015198 105 AGDNSQYPPTKVIIWDDHQS--------RCI---GEFA-FRSDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLKLLHQI 168 (411)
Q Consensus 105 ~~~d~~~~d~~i~vwd~~~~--------~~~---~~~~-~~~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~~~~~~ 168 (411)
++.| +.|++||+.++ +.+ ..+. |...|.+++|+|+ +.+++ .|+.|++||+++++.+...
T Consensus 114 gs~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 114 SEYG-----SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp TTTE-----EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred cCCC-----ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 8887 99999997654 222 2333 7899999999997 55555 7999999999988776666
Q ss_pred eccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEecc-------ccceeEEEecCCCCEEEEEc-CC---
Q 015198 169 ETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAH-------DSHIACFTLTLDGLLLATAS-TR--- 237 (411)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~-------~~~i~~l~~sp~g~~l~s~s-~d--- 237 (411)
..|.. .+.++++++++.+|++ |+.||.|++|+.++.....+..| ...|.+++|++++.++++.+ .+
T Consensus 189 ~~~~~--~v~~v~wspdg~~las-gs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 189 LPSTV--AVTSVCWSPKGKQLAV-GKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL 265 (434)
T ss_dssp ECGGG--CEEEEEECTTSSCEEE-EETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS
T ss_pred cCCCC--ceeEEEEcCCCCEEEE-EcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc
Confidence 65555 4556666667778876 66899999999886655555544 23899999999988775433 33
Q ss_pred ---CeEEEEEECCCCc-----eEEEEeCC-----CCCcceEEEEeCCCCCEEEEEeC-CCcEEEEEcc
Q 015198 238 ---GTLIRIFNTVDGT-----RLQEVRRG-----VDRAEIYSIALSPNVQWLAVASD-KGTVHIFSLR 291 (411)
Q Consensus 238 ---g~~I~vwd~~~~~-----~~~~~~~~-----~~~~~v~~l~~spdg~~l~s~s~-dg~I~vwd~~ 291 (411)
.. +++|++...+ ....+... ..+.+...+.+-++.+++++++. .+.|.|+...
T Consensus 266 ~~~~~-v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 266 ETSPD-VVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp SSCCE-EEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CCCCc-eEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 24 8899997652 11121110 12223333444467777665554 4557777643
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=7.2e-18 Score=171.11 Aligned_cols=246 Identities=12% Similarity=0.065 Sum_probs=163.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCE-----EEEEEeccCCeEEEEecCCCCC----CCCC
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGF-----RIVEMLFRCNILALVGAGDNSQ----YPPT 114 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~s~~~d~~----~~d~ 114 (411)
.....+++|+|||++|+++ |+.|++|++.+++...... .+.. ....+.|+||+..++.+..+.. ...+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLE--NSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEEC--TTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEe--chhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3456789999999999987 9999999998866433322 2221 2233678999887776654300 0115
Q ss_pred eEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEe-ccCCCc---------------c
Q 015198 115 KVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIE-TLANLR---------------G 176 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~-~~~~~~---------------~ 176 (411)
.+.+||+.+++......+...+...+|+|||+.++ .++.|++|++.+++..+... ++...+ .
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Confidence 67799999988654334678899999999999888 89999999998876543211 111100 1
Q ss_pred eEEEccCCCceEEEEecCCCC-----------------------------------eEEEEEcCC---c---ceEEEec-
Q 015198 177 LCCLSHHSSTSVLACPGLQRG-----------------------------------QVRIEHFGL---N---MIKLINA- 214 (411)
Q Consensus 177 ~~~~~~~~~~~~l~~~g~~dg-----------------------------------~i~i~~~~~---~---~~~~~~~- 214 (411)
...+.|+||++.||+....++ .|++|+... . ....+..
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~ 252 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAP 252 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCC
Confidence 123567778888887531111 466677766 4 4444543
Q ss_pred -----cccceeEEEecCCCCEEEEEcC----CCeEEEEEECCCCc----e--EEEE--eCCCCCcceE-----EEEeCCC
Q 015198 215 -----HDSHIACFTLTLDGLLLATAST----RGTLIRIFNTVDGT----R--LQEV--RRGVDRAEIY-----SIALSPN 272 (411)
Q Consensus 215 -----~~~~i~~l~~sp~g~~l~s~s~----dg~~I~vwd~~~~~----~--~~~~--~~~~~~~~v~-----~l~~spd 272 (411)
|...+..++|+|||++++.... +.. |++||+.+++ + +..+ .. +...|. .+.|+||
T Consensus 253 ~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~-i~~~d~~tg~~~~~~~~~~~l~~~~--~~~~v~~~~~~~p~fspD 329 (740)
T 4a5s_A 253 ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSV-MDICDYDESSGRWNCLVARQHIEMS--TTGWVGRFRPSEPHFTLD 329 (740)
T ss_dssp HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEE-EEEEEEETTTTEEEECGGGCEEEEC--SSSCSSSSSCCCCEECTT
T ss_pred ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEE-EEEEECCCCccccceeEEEEeeecc--CCceEccCcCCCceEcCC
Confidence 7788999999999997665432 336 9999999887 1 1122 22 333333 6889999
Q ss_pred CCEEE-EEeC-CC--cEEEEEcccccc
Q 015198 273 VQWLA-VASD-KG--TVHIFSLRVRVV 295 (411)
Q Consensus 273 g~~l~-s~s~-dg--~I~vwd~~~~~~ 295 (411)
|+.|+ ..+. +| .|++|++.+++.
T Consensus 330 G~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 330 GNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp SSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred CCEEEEEEEcCCCceEEEEEECCCCce
Confidence 99877 6654 44 588888876653
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.8e-15 Score=140.34 Aligned_cols=227 Identities=12% Similarity=0.078 Sum_probs=146.2
Q ss_pred EEEEEe---CCcEEEEecCCCcceEE--eecC-CCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC-CCcEEEEE
Q 015198 58 CFAAGT---SCGFRIYNCEPFKETFR--RDLK-SGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH-QSRCIGEF 130 (411)
Q Consensus 58 ~la~g~---dg~i~iw~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~-~~~~~~~~ 130 (411)
+|++|+ ++.|.+|+++.....+. .... .+...+..+.+++++..+++++. +.|.+|++. +++.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~------~~v~~~~~~~~g~~~~~~ 77 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM------KKWSSFAVKSPTEIVHEA 77 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB------TEEEEEEEEETTEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc------ceEEEEEECCCCCEEEee
Confidence 456666 25788887753222121 1110 12234556788999877766654 489999987 77765544
Q ss_pred eec--CceeEEEEcCCeEE--EE----------------EcCeEEEEEcC-CceeeEEEec--cCCCcceEEEccCCCce
Q 015198 131 AFR--SDVRSVKLSRDRIV--VV----------------LEHKIYVYSFV-DLKLLHQIET--LANLRGLCCLSHHSSTS 187 (411)
Q Consensus 131 ~~~--~~i~~~~~~~~~~~--~~----------------~dg~i~iwd~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 187 (411)
.+. +....++|+|+++. ++ .++.+.+|++. +++....+.. +........+.++++++
T Consensus 78 ~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 78 SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 432 44667899999984 32 26789999997 4665544432 11222455666777777
Q ss_pred EEEEecCCCCeEEEEEcC-Ccce---EEEe--ccccceeEEEecCCCCEEEEEcC-CCeEEEEEECC--CCceE---EEE
Q 015198 188 VLACPGLQRGQVRIEHFG-LNMI---KLIN--AHDSHIACFTLTLDGLLLATAST-RGTLIRIFNTV--DGTRL---QEV 255 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~-~~~~---~~~~--~~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~--~~~~~---~~~ 255 (411)
+++++...++.|++|+.. ...+ ..+. .|...+..++|+|+|++|++++. ++. |.+|++. +++.. ..+
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~-v~v~~~~~~~g~~~~~~~~~ 236 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNR-ICEYVIDPATHMPVYTHHSF 236 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCe-EEEEEEeCCCCcEEEccceE
Confidence 777655456799998876 3322 2233 23567899999999999887765 577 9999765 56643 223
Q ss_pred eCCC-----CCc------ceEEEE-eCCCCCEEEEEeCCC------cEEEEEcc
Q 015198 256 RRGV-----DRA------EIYSIA-LSPNVQWLAVASDKG------TVHIFSLR 291 (411)
Q Consensus 256 ~~~~-----~~~------~v~~l~-~spdg~~l~s~s~dg------~I~vwd~~ 291 (411)
.... +.. .+..++ |+|||++|+++..+. .|.+|+++
T Consensus 237 ~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 237 PLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp ESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred EcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 2210 111 488999 999999988766432 79999997
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=2e-16 Score=156.16 Aligned_cols=230 Identities=9% Similarity=0.058 Sum_probs=165.9
Q ss_pred cCCCC-CCeEEEEEcCCCCEEEEEe----CCcEEEEecCC--CcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 40 SDVDE-IELISVSWNQDYGCFAAGT----SCGFRIYNCEP--FKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 40 ~~~h~-~~V~~l~~s~~g~~la~g~----dg~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
...|. ..|.+++|+|| ++++++. +...+||.++. ....... .......+..+.++++..+++++..+
T Consensus 59 lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l-~~~~~~~~~~~s~dg~~~~~~s~~~~---- 132 (582)
T 3o4h_A 59 LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRL-EAVKPMRILSGVDTGEAVVFTGATED---- 132 (582)
T ss_dssp CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEEC-TTSCSBEEEEEEECSSCEEEEEECSS----
T ss_pred eecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccc-cCCCCceeeeeCCCCCeEEEEecCCC----
Confidence 44455 68999999999 6666655 34567776654 3332222 12334445566667777888887764
Q ss_pred CCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---Ec----CeEEEEEcCCceeeEEEeccCCCcceEEEccCCC
Q 015198 113 PTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LE----HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSS 185 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (411)
.+.+||+.+++......+.. .++.|+|||+.++ .+ ..|++||+.+++.. .+..+.. ....+.++|+
T Consensus 133 --~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~--~~~~~~~SpD 205 (582)
T 3o4h_A 133 --RVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEG--SFSSASISPG 205 (582)
T ss_dssp --CEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSC--EEEEEEECTT
T ss_pred --CceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCC--ccccceECCC
Confidence 44599999887766555544 8899999999888 34 67999999887765 5555544 4567777888
Q ss_pred ceEEEEecCCCC--eEEEEEcCCcceEEEeccccceeEEE--------ecCCCCEEEEEcCCCeEEEEEECCCCceEEEE
Q 015198 186 TSVLACPGLQRG--QVRIEHFGLNMIKLINAHDSHIACFT--------LTLDGLLLATASTRGTLIRIFNTVDGTRLQEV 255 (411)
Q Consensus 186 ~~~l~~~g~~dg--~i~i~~~~~~~~~~~~~~~~~i~~l~--------~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~ 255 (411)
++.|+. +..++ .|++|+..+.....+..|...+..++ |+|||.++++++.++. +++|++ |+.+.
T Consensus 206 G~~l~~-~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~-~~l~~~--g~~~~-- 279 (582)
T 3o4h_A 206 MKVTAG-LETAREARLVTVDPRDGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGR-SAVFID--GERVE-- 279 (582)
T ss_dssp SCEEEE-EECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTE-EEEEET--TEEEC--
T ss_pred CCEEEE-ccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCc-EEEEEE--CCeec--
Confidence 888884 55777 78888887665556677777777777 9999999999999999 999999 66543
Q ss_pred eCCCCCcceEEEEeCCCCCEEEEEeCCCc---EEEEEccc
Q 015198 256 RRGVDRAEIYSIALSPNVQWLAVASDKGT---VHIFSLRV 292 (411)
Q Consensus 256 ~~~~~~~~v~~l~~spdg~~l~s~s~dg~---I~vwd~~~ 292 (411)
. ..+.+.+++|+ +++++++++.+.+ +++|++.+
T Consensus 280 -~--~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 280 -A--PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp -C--CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCC
T ss_pred -c--CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcCCC
Confidence 2 44578999999 9999988887754 66666553
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.72 E-value=2.9e-16 Score=146.78 Aligned_cols=234 Identities=9% Similarity=-0.082 Sum_probs=150.7
Q ss_pred CCeEEEEEcCCCCEEEEEe--CC--cEEEEecCCCcceEEeecCCCCEEEEE-EeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 45 IELISVSWNQDYGCFAAGT--SC--GFRIYNCEPFKETFRRDLKSGGFRIVE-MLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
..+..++|+|||++|+... ++ .|.+|++++.+. .. +..+...... +.|+|++..++....+ +.|++|
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-~~--l~~~~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~ 107 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-VQ--LTEGKGDNTFGGFISTDERAFFYVKNE-----LNLMKV 107 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-EE--CCCSSCBCTTTCEECTTSSEEEEEETT-----TEEEEE
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE-EE--eecCCCCccccceECCCCCEEEEEEcC-----CcEEEE
Confidence 3477889999999988776 23 577778776432 22 2123322222 5688998877776665 789999
Q ss_pred ECCCCcEEEEEe-ecCceeE-------------------EEEcCCeEEEE--------EcCeEEEEEcCCceeeEEEecc
Q 015198 120 DDHQSRCIGEFA-FRSDVRS-------------------VKLSRDRIVVV--------LEHKIYVYSFVDLKLLHQIETL 171 (411)
Q Consensus 120 d~~~~~~~~~~~-~~~~i~~-------------------~~~~~~~~~~~--------~dg~i~iwd~~~~~~~~~~~~~ 171 (411)
|+.+++...... +...... +.++|++..++ .+..|++||+.+++...... +
T Consensus 108 d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~ 186 (396)
T 3c5m_A 108 DLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-D 186 (396)
T ss_dssp ETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-E
T ss_pred ECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-C
Confidence 999888766555 2221111 23566665543 24579999998887655443 3
Q ss_pred CCCcceEEEccCC-CceEEEEecCCC-----CeEEEEEcCCcceEEEecc--ccceeEEEecCCCCEEEEEcCC-----C
Q 015198 172 ANLRGLCCLSHHS-STSVLACPGLQR-----GQVRIEHFGLNMIKLINAH--DSHIACFTLTLDGLLLATASTR-----G 238 (411)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~l~~~g~~d-----g~i~i~~~~~~~~~~~~~~--~~~i~~l~~sp~g~~l~s~s~d-----g 238 (411)
.. ....+.+++ ++..|++..... ..|.+++..+.....+..+ ...+..++|+|+|++|+.++.+ +
T Consensus 187 ~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 187 TA--WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp SS--CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred Cc--ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccc
Confidence 33 334455555 556555543221 3577777766554444433 2357889999999987776543 5
Q ss_pred eEEEEEECCCCceEEEEeCCCCCcceEEEEeCC-CCCEEEEEe----------------CCCcEEEEEcccccc
Q 015198 239 TLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP-NVQWLAVAS----------------DKGTVHIFSLRVRVV 295 (411)
Q Consensus 239 ~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s----------------~dg~I~vwd~~~~~~ 295 (411)
. |++||+.+++....... . ... +.|+| ||++|+.++ .++.|++||+.+++.
T Consensus 265 ~-l~~~d~~~g~~~~l~~~---~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 265 V-IYKANPETLENEEVMVM---P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp E-EEEECTTTCCEEEEEEC---C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred e-EEEEECCCCCeEEeeeC---C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 5 99999988876543332 1 123 89999 999888765 346799999987753
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=4.2e-15 Score=135.79 Aligned_cols=243 Identities=11% Similarity=0.025 Sum_probs=172.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-C------------------------CcEEEEecCCCcceEEeecCCCCEEEEEEecc
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-S------------------------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFR 96 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-d------------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (411)
..-+.+.+|+++|+|+++++.. + +.|.+||.++.+.. ...-...-.....++++
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL-QSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE-EEECTTTCSSEEEEEEC
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE-eccCCCccCCceEEEEC
Confidence 3457799999999999998887 5 36999998765543 22111233456778888
Q ss_pred CCeEEEEecCCCCCCCCCeEEEEECCCCc-EEEEEe----------ecCceeEEEEcC-CeEEEE-E---cCeEEEEEcC
Q 015198 97 CNILALVGAGDNSQYPPTKVIIWDDHQSR-CIGEFA----------FRSDVRSVKLSR-DRIVVV-L---EHKIYVYSFV 160 (411)
Q Consensus 97 ~~~~~l~s~~~d~~~~d~~i~vwd~~~~~-~~~~~~----------~~~~i~~~~~~~-~~~~~~-~---dg~i~iwd~~ 160 (411)
+++.++++...+ +.|++||..... .+..+. +-.....++++| ++.+++ . ++.|++|| .
T Consensus 100 ~~g~l~v~d~~~-----~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~ 173 (329)
T 3fvz_A 100 TDGNYWVTDVAL-----HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-P 173 (329)
T ss_dssp TTSCEEEEETTT-----TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-T
T ss_pred CCCCEEEEECCC-----CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-C
Confidence 888888887766 999999965442 455552 123578999999 777776 2 57899999 5
Q ss_pred CceeeEEEeccCCC--------cceEEEccCCC-ceEEEEecCCCCeEEEEEcC-CcceEEEe--ccccceeEEEecCCC
Q 015198 161 DLKLLHQIETLANL--------RGLCCLSHHSS-TSVLACPGLQRGQVRIEHFG-LNMIKLIN--AHDSHIACFTLTLDG 228 (411)
Q Consensus 161 ~~~~~~~~~~~~~~--------~~~~~~~~~~~-~~~l~~~g~~dg~i~i~~~~-~~~~~~~~--~~~~~i~~l~~sp~g 228 (411)
+++.+..+...... .....++.+++ +.++ ++...++.|++|+.. ++.+..+. .+...+..++|+| +
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~-v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLC-VADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEE-EEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEE-EEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 67777776432211 12445566666 4444 446678899999987 77777763 4566788999999 4
Q ss_pred CEEEE-------EcCCCeEEEEEECCCCceEEEEeC-CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 229 LLLAT-------ASTRGTLIRIFNTVDGTRLQEVRR-GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 229 ~~l~s-------~s~dg~~I~vwd~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
..+++ ...+.. |++||+.+++.+..+.. ..+...+..|+++|+|.++++...++.|++|+++...
T Consensus 252 ~~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEECS
T ss_pred EEEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCccc
Confidence 33333 334457 99999999999888742 1145578999999999888888889999999997643
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=9.7e-16 Score=143.02 Aligned_cols=242 Identities=10% Similarity=0.034 Sum_probs=158.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEe---------------
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVG--------------- 104 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s--------------- 104 (411)
.++...+..+.|+|||+.|+.+. ++.|++||+.+.+.......+........+.+++++..++.
T Consensus 77 ~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 77 EGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp CSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHH
T ss_pred eCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccc
Confidence 34455555788999999999999 88999999998665544444333233334445777766653
Q ss_pred -------cCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcC-CeEEEE--E-------cCeEEEEEcCCceeeEE
Q 015198 105 -------AGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSR-DRIVVV--L-------EHKIYVYSFVDLKLLHQ 167 (411)
Q Consensus 105 -------~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~--~-------dg~i~iwd~~~~~~~~~ 167 (411)
...+ ..|.+||+.+++......+...+..+.|+| |+..++ . ...|+++|+..++. ..
T Consensus 157 ~~~~~~~~~~~-----~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~ 230 (388)
T 3pe7_A 157 KFHEFYFTKPC-----CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RK 230 (388)
T ss_dssp HHHHHGGGCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EE
T ss_pred hhhhhhccCCc-----ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EE
Confidence 1222 789999999998776666778899999999 998876 2 23788888765443 33
Q ss_pred EeccCCCcceEEEccCCCceEEEEecCCCC----eEEEEEcCCcceEEEecccc------ceeEEEecCCCCEEEEE---
Q 015198 168 IETLANLRGLCCLSHHSSTSVLACPGLQRG----QVRIEHFGLNMIKLINAHDS------HIACFTLTLDGLLLATA--- 234 (411)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg----~i~i~~~~~~~~~~~~~~~~------~i~~l~~sp~g~~l~s~--- 234 (411)
+..+.....+....++|++..|++.+..++ .|++|+........+..... ....++|+|||+.|+..
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 310 (388)
T 3pe7_A 231 VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD 310 (388)
T ss_dssp SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------
T ss_pred eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeee
Confidence 333322123455667778777766443322 38888877655444322211 01224799999987754
Q ss_pred ------cCCCeEEEEEECCCCceEEEEeCCCCCc-----------ceEEEEeCCCCCEEEEEe-CCCcEEEEEccc
Q 015198 235 ------STRGTLIRIFNTVDGTRLQEVRRGVDRA-----------EIYSIALSPNVQWLAVAS-DKGTVHIFSLRV 292 (411)
Q Consensus 235 ------s~dg~~I~vwd~~~~~~~~~~~~~~~~~-----------~v~~l~~spdg~~l~s~s-~dg~I~vwd~~~ 292 (411)
..+.. |++||+.+++.. .+.. +.. .+..++|+|||+.|+..+ .+|...||.++-
T Consensus 311 ~~~~~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 311 DSGYKIENDPF-LYVFNMKNGTQH-RVAR--HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ------CCCCE-EEEEETTTTEEE-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred ccccccCCCCE-EEEEeccCCceE-Eecc--ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 44567 999999887654 4443 333 477889999999888666 467666666543
No 168
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=1.2e-14 Score=133.46 Aligned_cols=223 Identities=8% Similarity=-0.021 Sum_probs=144.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEe----------CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 43 DEIELISVSWNQDYGCFAAGT----------SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~----------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
.-..+..+++ ||++++... ++.|.+|++++.+.. . + ..+..+.|+|++..++....+....
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~--l----~~~~~~~~SpDg~~la~~~~~~~~~ 83 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-F--I----ENATMPRISPDGKKIAFMRANEEKK 83 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-E--E----ESCEEEEECTTSSEEEEEEEETTTT
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-E--c----ccCCCeEECCCCCEEEEEEeccCCC
Confidence 3456788888 999888642 456888898875432 1 2 3456788999987666544320000
Q ss_pred CCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--E-c---------------------------CeEEEEEcCCc
Q 015198 113 PTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--L-E---------------------------HKIYVYSFVDL 162 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~-d---------------------------g~i~iwd~~~~ 162 (411)
...|.+||+.+++......... +..+.|+||+..++ . + ..|++||+.++
T Consensus 84 ~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~ 162 (347)
T 2gop_A 84 VSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESE 162 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTT
T ss_pred cceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCC
Confidence 1458889998887766666555 99999999998776 2 2 57999999988
Q ss_pred eeeEEEeccCCCcceEEEccCCCceEEEEecCCC------C-eEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEc
Q 015198 163 KLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR------G-QVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAS 235 (411)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d------g-~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s 235 (411)
+.+..+.. . .+ ..+.+++++ ++++ +..+ . ...||..+......+..+ ..+..+ +|+|++|+.++
T Consensus 163 ~~~~~l~~-~-~~--~~~~~spdg-~~~~-~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~--spdg~~l~~~~ 233 (347)
T 2gop_A 163 EVIEEFEK-P-RF--SSGIWHRDK-IVVN-VPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV--DSDGERILLYG 233 (347)
T ss_dssp EEEEEEEE-E-TT--CEEEEETTE-EEEE-EECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE--EECSSCEEEEE
T ss_pred eEEeeecC-C-Cc--ccccCCCCe-EEEE-EecccccccccccccEEEeCCCceEEeccC-cceeeE--CCCCCEEEEEE
Confidence 87455544 2 33 344555666 5444 3222 1 334433224344455545 555544 99999887766
Q ss_pred CC--------CeEEEEEECCCCceEEEEeCCCCCcceEE-EEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 236 TR--------GTLIRIFNTVDGTRLQEVRRGVDRAEIYS-IALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 236 ~d--------g~~I~vwd~~~~~~~~~~~~~~~~~~v~~-l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
.+ .. |++|| +++.. .+... +...+.. +.|+ |+ ++++++.++.++|| +.+
T Consensus 234 ~~~~~~~~~~~~-l~~~d--~~~~~-~l~~~-~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 234 KPEKKYMSEHNK-LYIYD--GKEVM-GILDE-VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp CCSSSCCCSSCE-EEEEC--SSCEE-ESSTT-CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred ccccCCccccce-EEEEC--CCceE-ecccc-CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 43 35 88888 55543 33322 4567886 9999 88 88999999999999 884
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.69 E-value=2.1e-14 Score=131.14 Aligned_cols=236 Identities=13% Similarity=0.102 Sum_probs=158.6
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
..|.+++|++++..++... ++.++.|.- +.... +..+......+.|++++.+++++..+ +.|.+||..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~i~~~d~~~ 75 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EPWLE--ISKKGLQLEGLNFDRQGQLFLLDVFE-----GNIFKINPET 75 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EEEEE--EESSCCCEEEEEECTTSCEEEEETTT-----CEEEEECTTT
T ss_pred cccceeeecCCccceeEEeecccCccccc---ceeEE--EeccCccccCcEECCCCCEEEEECCC-----CEEEEEeCCC
Confidence 3477888999887776656 888999932 22222 22444456778888988887776666 8999999988
Q ss_pred CcEEEEE-eecCceeEEEEcCCeEEEE--E-c----CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC
Q 015198 124 SRCIGEF-AFRSDVRSVKLSRDRIVVV--L-E----HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ 195 (411)
Q Consensus 124 ~~~~~~~-~~~~~i~~~~~~~~~~~~~--~-d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 195 (411)
++..... .+...+.++++++++.+++ . + +.|++||..+++....+...........+..++++.+++.....
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 8876555 3567899999999998766 2 2 48999998877654344322222245566677777776653211
Q ss_pred -----CCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEE-EEcCCCeEEEEEECCC-CceEEEE-----eCCCCCcc
Q 015198 196 -----RGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLA-TASTRGTLIRIFNTVD-GTRLQEV-----RRGVDRAE 263 (411)
Q Consensus 196 -----dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~-s~s~dg~~I~vwd~~~-~~~~~~~-----~~~~~~~~ 263 (411)
.+.|..++..+.....+..+...+..++|+|+|+.|+ +.+.++. |++||+.+ +..+..+ ........
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~~~ 234 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGHEG 234 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSSSE
T ss_pred cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCCCC
Confidence 2445555554444444444445678999999998654 4456788 99999864 4433221 11001136
Q ss_pred eEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 264 IYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 264 v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
+..++++++|+++++...++.|.+||.+
T Consensus 235 ~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 235 PDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 7889999999988887788899999873
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=4e-15 Score=149.01 Aligned_cols=240 Identities=10% Similarity=-0.032 Sum_probs=159.2
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEE--e-CCcEEEEecCCCcceEEeecCCCCEEEE---------EEec--cCCeEE-EE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAG--T-SCGFRIYNCEPFKETFRRDLKSGGFRIV---------EMLF--RCNILA-LV 103 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g--~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~---------~~~~--~~~~~~-l~ 103 (411)
...+|...|..++|++++-+++.. . ++...||.......... +..+...+. .+.| +||+.. ++
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la 95 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEES--ALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLV 95 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEE--SSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcce--eCCCCccccccccccCCccceeeeecCCCeEEE
Confidence 456788999999999987777777 4 78899999744343332 323333322 3333 377765 44
Q ss_pred ecCCCCCCCCCeEEEEECC--C-CcEEEEEe-----ecCceeEEEEcCCeEEEE---Ec----------CeEEEEEcCC-
Q 015198 104 GAGDNSQYPPTKVIIWDDH--Q-SRCIGEFA-----FRSDVRSVKLSRDRIVVV---LE----------HKIYVYSFVD- 161 (411)
Q Consensus 104 s~~~d~~~~d~~i~vwd~~--~-~~~~~~~~-----~~~~i~~~~~~~~~~~~~---~d----------g~i~iwd~~~- 161 (411)
..... +..|.+|++. . ++...... +...+..++|+|||+.++ .+ ..|++||+.+
T Consensus 96 ~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~ 171 (662)
T 3azo_A 96 FTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGS 171 (662)
T ss_dssp EEBTT----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTST
T ss_pred EEECC----CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCC
Confidence 43321 2778888876 3 44332222 345788999999998777 34 5899999987
Q ss_pred -----ceeeEEEe-ccCCCcceEEEccCCCceEEEEecCCC-------CeEEEEEcCC-c---ceEEE-eccccceeEEE
Q 015198 162 -----LKLLHQIE-TLANLRGLCCLSHHSSTSVLACPGLQR-------GQVRIEHFGL-N---MIKLI-NAHDSHIACFT 223 (411)
Q Consensus 162 -----~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g~~d-------g~i~i~~~~~-~---~~~~~-~~~~~~i~~l~ 223 (411)
++. ..+. .+.. ....+.++|+++.|++++... ..|++|+... . ....+ ..|...+..++
T Consensus 172 ~~~~~~~~-~~l~~~~~~--~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~ 248 (662)
T 3azo_A 172 AAADRSAV-RELSDDAHR--FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAE 248 (662)
T ss_dssp TTTCGGGS-EESSCSCSS--EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEE
T ss_pred ccccCCce-eEEEecCCC--cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceE
Confidence 544 3333 3222 444566777888887755222 4788888762 3 33444 45578899999
Q ss_pred ecCCCCEEEEEcCCC--eEEEEEECCCCceEEEEeCCCCCcc--------eEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 224 LTLDGLLLATASTRG--TLIRIFNTVDGTRLQEVRRGVDRAE--------IYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 224 ~sp~g~~l~s~s~dg--~~I~vwd~~~~~~~~~~~~~~~~~~--------v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
|+|||+++++++.++ . |++||+.+++....... +... +..++|+|++++++++.. +.++||.++
T Consensus 249 ~spdg~l~~~~~~~~~~~-l~~~~~~~~~~~~l~~~--~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 249 WAPDGSLIVATDRTGWWN-LHRVDPATGAATQLCRR--EEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp ECTTSCEEEEECTTSSCE-EEEECTTTCCEEESSCC--SSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred ECCCCeEEEEECCCCCeE-EEEEECCCCceeecccc--cccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 999999888888887 6 77777767765433222 2211 567899999999999998 999999554
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.68 E-value=1.4e-13 Score=122.87 Aligned_cols=234 Identities=13% Similarity=0.145 Sum_probs=168.5
Q ss_pred EEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee-------cCceeEEEE-cCCeEEEE-E---cCeEE
Q 015198 88 FRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF-------RSDVRSVKL-SRDRIVVV-L---EHKIY 155 (411)
Q Consensus 88 ~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~-------~~~i~~~~~-~~~~~~~~-~---dg~i~ 155 (411)
.....+.+++++.++++...+ +.|.+||.. ++.+..+.. ...+..+++ .+++.+++ . ++.|+
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~-----~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNN-----HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGG-----TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CCCceEEECCCCCEEEEECCC-----CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 446677788888777776655 899999976 666666642 246789999 57777666 3 78999
Q ss_pred EEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEe--ccccceeEEEecCCCCEEEE
Q 015198 156 VYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLIN--AHDSHIACFTLTLDGLLLAT 233 (411)
Q Consensus 156 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~--~~~~~i~~l~~sp~g~~l~s 233 (411)
+|| .+++.+..+.... ......+..++++.++++ ...++.|.+|+..++.+..+. .+...+..++++++|+++++
T Consensus 104 ~~d-~~g~~~~~~~~~~-~~~~~~i~~~~~g~l~v~-~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 180 (286)
T 1q7f_A 104 IYN-QYGQFVRKFGATI-LQHPRGVTVDNKGRIIVV-ECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFIS 180 (286)
T ss_dssp EEC-TTSCEEEEECTTT-CSCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEE
T ss_pred EEC-CCCcEEEEecCcc-CCCceEEEEeCCCCEEEE-ECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEE
Confidence 999 6677776664322 123456666677766554 456788999988877766664 34456889999999998888
Q ss_pred EcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCC-cEEEEEccccccCCCCCCCCCCCCccccc
Q 015198 234 ASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKG-TVHIFSLRVRVVGEDSSSSLSTPSQSTEL 312 (411)
Q Consensus 234 ~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg-~I~vwd~~~~~~~~~~~~~~~~~~~~~~~ 312 (411)
...++. |++||. +++.+..+....+...+..++++++|+++++...++ .|.+|+.. ++..
T Consensus 181 ~~~~~~-i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~---------------- 241 (286)
T 1q7f_A 181 DNRAHC-VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLI---------------- 241 (286)
T ss_dssp EGGGTE-EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEE----------------
T ss_pred ECCCCE-EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEE----------------
Confidence 888888 999996 667776775422235789999999999888887776 89999853 3211
Q ss_pred ccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCC--CceEEEEEccCCEEEEEEeCCcEEEEEEec
Q 015198 313 LNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPE--VTHFIAAFGSQNTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~ 389 (411)
..+..+. .....+++++++.|++++.|+.|++|.+..
T Consensus 242 ----------------------------------------~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 ----------------------------------------SALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ----------------------------------------EEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred ----------------------------------------EEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 1122211 234567899998898888899999998764
No 172
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=2.1e-13 Score=121.11 Aligned_cols=186 Identities=13% Similarity=0.102 Sum_probs=146.6
Q ss_pred eEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeec--CceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCc
Q 015198 99 ILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFR--SDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLR 175 (411)
Q Consensus 99 ~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~--~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~ 175 (411)
+.++++++.+ +.|.+||.++|+.+..+... ..+.++.+.|+|++++ .++.|+.||. +++.+..+..+.. .
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~-~ 77 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPAG-C 77 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCTT-C
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCC-c
Confidence 4566667766 99999999899999999843 4789999999999888 7888999998 8999999876421 2
Q ss_pred ceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEec------cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC
Q 015198 176 GLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINA------HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG 249 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~------~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~ 249 (411)
......+.+++.++++.+..++.|..++.+++.+..+.. +......+++.++|++|++...++. |..||.. |
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-C
Confidence 345566677788887644326667667778877776642 2234556778999999999999999 9999987 9
Q ss_pred ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 250 TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 250 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+.+.++... ..+.++.+.++|++|+++..++.|..+|.++|+..
T Consensus 156 ~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 156 QLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp CEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred CEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 999998863 34566788899999999888889999999988754
No 173
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.65 E-value=5.5e-16 Score=156.84 Aligned_cols=191 Identities=14% Similarity=0.105 Sum_probs=134.8
Q ss_pred EEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC----ceeEEEEcCCeEEEE---E---------cCeEE
Q 015198 92 EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS----DVRSVKLSRDRIVVV---L---------EHKIY 155 (411)
Q Consensus 92 ~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~---~---------dg~i~ 155 (411)
.+.|++++.+++++. + +.|++||+.+++....+.+.. .+.+++|+|||+.++ . ++.|+
T Consensus 20 ~~~~s~dg~~~~~~~-d-----~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWISGQEYLHQSA-D-----NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESSSSEEEEECT-T-----SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECCCCeEEEEcC-C-----CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 567889997776654 5 999999999999887776432 389999999999887 2 58999
Q ss_pred EEEcCCceee--EEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEe--ccccce------------
Q 015198 156 VYSFVDLKLL--HQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLIN--AHDSHI------------ 219 (411)
Q Consensus 156 iwd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~--~~~~~i------------ 219 (411)
+||+.+++.+ ..+. . .+..+.++|+++.|+++ .++.|++|+........+. ++...|
T Consensus 94 ~~d~~~g~~~~~~~l~---~--~~~~~~~SPDG~~la~~--~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 94 IYDLSNGEFVRGNELP---R--PIQYLCWSPVGSKLAYV--YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEETTTTEECCSSCCC---S--SBCCEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred EEECCCCccccceecC---c--ccccceECCCCCEEEEE--ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeee
Confidence 9999988763 1221 2 23345566677778875 4789999987654433332 222211
Q ss_pred -----eEEEecCCCCEEEEEcCCC----------------------------------eEEEEEECCCCceE--EEEeC-
Q 015198 220 -----ACFTLTLDGLLLATASTRG----------------------------------TLIRIFNTVDGTRL--QEVRR- 257 (411)
Q Consensus 220 -----~~l~~sp~g~~l~s~s~dg----------------------------------~~I~vwd~~~~~~~--~~~~~- 257 (411)
.+++|+|||++|++++.|. . |++||+.+++.+ ..+..
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~-l~~~d~~~~~~~~~~~~~~~ 245 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVR-IFIIDTTYPAYVGPQEVPVP 245 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEE-EEEEESSCHHHHCCEECCCC
T ss_pred cccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeE-EEEEECCCCCccceeEccCC
Confidence 4899999999999887552 5 899999887652 12211
Q ss_pred ---CCCCcceEEEEeCCCCCEEEEEeCCC----cEEEEE----ccccccC
Q 015198 258 ---GVDRAEIYSIALSPNVQWLAVASDKG----TVHIFS----LRVRVVG 296 (411)
Q Consensus 258 ---~~~~~~v~~l~~spdg~~l~s~s~dg----~I~vwd----~~~~~~~ 296 (411)
..+...+..++|+||++++++....+ .|.+|| +.+++..
T Consensus 246 ~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 246 AMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp HHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECC
T ss_pred ccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceE
Confidence 01666899999999988777644332 488899 7777654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.64 E-value=1.4e-13 Score=125.74 Aligned_cols=206 Identities=9% Similarity=0.085 Sum_probs=143.9
Q ss_pred EEEEEeccCCeEEEEecCCCCCC-------------------CCCeEEEEECCCCcEEEEEe--ecCceeEEEEcCCeEE
Q 015198 89 RIVEMLFRCNILALVGAGDNSQY-------------------PPTKVIIWDDHQSRCIGEFA--FRSDVRSVKLSRDRIV 147 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~-------------------~d~~i~vwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~ 147 (411)
.+..+++++++.++++...+... .++.|.+||..+++.+..+. +-.....+++++++.+
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 46667778877777766543100 12479999998899877665 2357889999999987
Q ss_pred EE---EcCeEEEEEcCCce-eeEEEec-------cCCCcceEEEccCC-CceEEEEecCCCCeEEEEEcCCcceEEEecc
Q 015198 148 VV---LEHKIYVYSFVDLK-LLHQIET-------LANLRGLCCLSHHS-STSVLACPGLQRGQVRIEHFGLNMIKLINAH 215 (411)
Q Consensus 148 ~~---~dg~i~iwd~~~~~-~~~~~~~-------~~~~~~~~~~~~~~-~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~ 215 (411)
++ .++.|++||..... .+..+.. .........+++++ ++.++++.+..++.|++|+.++..+..+...
T Consensus 105 ~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~ 184 (329)
T 3fvz_A 105 WVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEE 184 (329)
T ss_dssp EEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEE
T ss_pred EEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccC
Confidence 76 46899999975432 4555532 11112455666776 5566554322588999998888777766432
Q ss_pred ----------ccceeEEEecCC-CCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEE------
Q 015198 216 ----------DSHIACFTLTLD-GLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAV------ 278 (411)
Q Consensus 216 ----------~~~i~~l~~sp~-g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s------ 278 (411)
-.....++++|+ +.++++...++. |++||..+++.+..+....+...+..++|+| +..+++
T Consensus 185 g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v 262 (329)
T 3fvz_A 185 SSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYF 262 (329)
T ss_dssp CCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCT
T ss_pred CCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEe
Confidence 234789999998 777777778888 9999998899998886554666788999999 433333
Q ss_pred -EeCCCcEEEEEccccccC
Q 015198 279 -ASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 279 -~s~dg~I~vwd~~~~~~~ 296 (411)
...+..|++|++.+++..
T Consensus 263 ~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 263 GDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp TCSCCCCEEEEETTTCCEE
T ss_pred ccCCCcEEEEEEcCCCeEE
Confidence 334458999999887644
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=5.1e-13 Score=119.85 Aligned_cols=234 Identities=8% Similarity=-0.064 Sum_probs=162.7
Q ss_pred ccCCCCCCeEEEEEcCCCC-EEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 39 FSDVDEIELISVSWNQDYG-CFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~-~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
....+.....+++|+|+|+ +++++. ++.|..|+.++. ..... .....+..+.+++++.++++...+ +.|
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~--~~~~~~~~l~~~~dg~l~v~~~~~-----~~i 92 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM--HPSHHQNGHCLNKQGHLIACSHGL-----RRL 92 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE--SSCSSEEEEEECTTCCEEEEETTT-----TEE
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE--CCCCCcceeeECCCCcEEEEecCC-----CeE
Confidence 3445666788999999998 667777 899999998874 22222 344457788899988888877655 899
Q ss_pred EEEECCCCcEEEEEee-----cCceeEEEEcCCeEEEEE--------------------cCeEEEEEcCCceeeEEEecc
Q 015198 117 IIWDDHQSRCIGEFAF-----RSDVRSVKLSRDRIVVVL--------------------EHKIYVYSFVDLKLLHQIETL 171 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~--------------------dg~i~iwd~~~~~~~~~~~~~ 171 (411)
.+||..+++....... ...+..++++|+|.+++. .+.|+.++.. ++. ..+..+
T Consensus 93 ~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~ 170 (296)
T 3e5z_A 93 ERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD 170 (296)
T ss_dssp EEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC
T ss_pred EEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC
Confidence 9999888876544331 235678999999988773 2356666654 443 333333
Q ss_pred CCCcceEEEccCCCceEEEEecCCCCeEEEEEcC--Ccc---eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEEC
Q 015198 172 ANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG--LNM---IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNT 246 (411)
Q Consensus 172 ~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~--~~~---~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~ 246 (411)
.. ....+.+++++..+ ++...++.|++|+.. +.. ...+..+...+..++++++|+++++. ++. |.+||.
T Consensus 171 ~~--~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~ 244 (296)
T 3e5z_A 171 RV--KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTP 244 (296)
T ss_dssp CS--SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECT
T ss_pred CC--CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECC
Confidence 22 33456667777777 556678899998764 322 22333345567789999999976666 778 999997
Q ss_pred CCCceEEEEeCCCCCcceEEEEe-CCCCCEEEEEeCCCcEEEEEccccc
Q 015198 247 VDGTRLQEVRRGVDRAEIYSIAL-SPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 247 ~~~~~~~~~~~~~~~~~v~~l~~-spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
. ++.+..+.. +.. +.+++| .|+++.|++++.++ +.-++.++++
T Consensus 245 ~-g~~~~~~~~--~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 245 D-GDELGRVLT--PQT-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp T-SCEEEEEEC--SSC-CCEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred C-CCEEEEEEC--CCC-ceeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 5 888878876 444 889999 68999999888764 5555554443
No 176
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=7.8e-12 Score=111.80 Aligned_cols=235 Identities=10% Similarity=-0.019 Sum_probs=161.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
..+...+.++++.++|+++++.. ++.|.+|+.+ .. .....+......+..+.+++++.++++...+ +.|..|
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~ 83 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAA-----NKIGRI 83 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEE
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCC-----CeEEEE
Confidence 34556799999999999887766 7899999987 33 3333222344567788888888777776554 889999
Q ss_pred ECCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec
Q 015198 120 DDHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG 193 (411)
Q Consensus 120 d~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 193 (411)
|.. ++. ..+. ....+..+++.+++.+.+ .++.|..||. +++... +...........+..++++.++++ .
T Consensus 84 ~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~-~ 158 (299)
T 2z2n_A 84 TKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-YELPNKGSYPSFITLGSDNALWFT-E 158 (299)
T ss_dssp CTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSCEEEE-E
T ss_pred CCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-ecCCCCCCCCceEEEcCCCCEEEE-e
Confidence 975 443 3333 345788999999887776 3678999998 554432 222212224556666777766654 4
Q ss_pred CCCCeEEEEEcCCcceEE-EeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 194 LQRGQVRIEHFGLNMIKL-INAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 194 ~~dg~i~i~~~~~~~~~~-~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
..++.|..++..++.... +..+...+..++++++|+++++...++. |.+||. +++.. .+........+.+++++++
T Consensus 159 ~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 159 NQNNAIGRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEIT-EFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEE-EEECSSTTCCEEEEEECST
T ss_pred CCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEE-EEECCCCCCCceeEEECCC
Confidence 456788887764433322 2233456789999999998777777788 999998 77644 3432223457899999999
Q ss_pred CCEEEEEeCCCcEEEEEc
Q 015198 273 VQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~ 290 (411)
|+++++...++.|.+||.
T Consensus 236 g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 236 IDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCEEEEETTTTEEEEEET
T ss_pred CCEEEeccCCceEEEECC
Confidence 997766657788999998
No 177
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.62 E-value=9.4e-13 Score=120.06 Aligned_cols=216 Identities=9% Similarity=0.001 Sum_probs=151.2
Q ss_pred CCcEEEEecCCCcceEEeec----CCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEE
Q 015198 64 SCGFRIYNCEPFKETFRRDL----KSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSV 139 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~ 139 (411)
++.|.+||.++.+....... ..-......+.+..+..+++.. .+ +.|.+||..+++.+..+........+
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~-~~-----~~v~viD~~t~~~~~~i~~~~~p~~i 89 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVN-NS-----HVIFAIDINTFKEVGRITGFTSPRYI 89 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEG-GG-----TEEEEEETTTCCEEEEEECCSSEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEc-CC-----CEEEEEECcccEEEEEcCCCCCCcEE
Confidence 68899999987543221100 0111223445566665555554 33 89999999999999998877788999
Q ss_pred EEcCCeEEEE-E--cCeEEEEEcCCceeeEEEeccC------CCcceEEEccCCCceEEEEecC-CCCeEEEEEcC-Ccc
Q 015198 140 KLSRDRIVVV-L--EHKIYVYSFVDLKLLHQIETLA------NLRGLCCLSHHSSTSVLACPGL-QRGQVRIEHFG-LNM 208 (411)
Q Consensus 140 ~~~~~~~~~~-~--dg~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~g~-~dg~i~i~~~~-~~~ 208 (411)
++++++.+.+ . ++.|.+||+.+++....+.... .+. .+++ + ++.+++ +.. .++.|.+++.. .+.
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~--~-~~~lyv-~~~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ--Y-GKYVYV-NCWSYQNRILKIDTETDKV 164 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE--E-TTEEEE-EECTTCCEEEEEETTTTEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE--E-CCEEEE-EcCCCCCEEEEEECCCCeE
Confidence 9988886665 3 7899999999999888876544 332 2334 2 334443 333 47889887765 444
Q ss_pred eEEEeccccceeEEEecCCCCEEEEEcCC----------CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEE
Q 015198 209 IKLINAHDSHIACFTLTLDGLLLATASTR----------GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAV 278 (411)
Q Consensus 209 ~~~~~~~~~~i~~l~~sp~g~~l~s~s~d----------g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 278 (411)
+..+... .....++++|+|++++++..+ +. |.++|..+++....+... .......++|+|++++|++
T Consensus 165 ~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 165 VDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCEEEE
T ss_pred EEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecC-CCCCceeEEEecCCCEEEE
Confidence 5555543 345688999999977776654 67 999999999888777642 1236889999999999988
Q ss_pred EeCCCcEEEEEcccccc
Q 015198 279 ASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 279 ~s~dg~I~vwd~~~~~~ 295 (411)
+.. .|.+||..+++.
T Consensus 242 ~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 242 INN--DIWRMPVEADRV 256 (328)
T ss_dssp ESS--SEEEEETTCSSC
T ss_pred Ecc--EEEEEECCCCce
Confidence 765 899999987764
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.61 E-value=5.8e-14 Score=141.76 Aligned_cols=246 Identities=11% Similarity=0.015 Sum_probs=164.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe--CC----cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCC----
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT--SC----GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQ---- 110 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~--dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~---- 110 (411)
.+|...+..++|||||++||.+. +| .|++||+++++... ..+ ....+..+.|+||+..|+.+..+..
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~-~~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP-DVL--ERVKFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE-EEE--EEECSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc-ccc--cCcccceEEEEeCCCEEEEEEECCccccc
Confidence 34555789999999999999776 33 79999998855432 222 1222446789998866655544311
Q ss_pred -------CCCCeEEEEECCCCcE--EEEEe---ecCceeEEEEcCCeEEEE---E-----cCeEEEEEcCC------ce-
Q 015198 111 -------YPPTKVIIWDDHQSRC--IGEFA---FRSDVRSVKLSRDRIVVV---L-----EHKIYVYSFVD------LK- 163 (411)
Q Consensus 111 -------~~d~~i~vwd~~~~~~--~~~~~---~~~~i~~~~~~~~~~~~~---~-----dg~i~iwd~~~------~~- 163 (411)
.....|++|++.+++. ...+. +...+..+.|+||+++++ . +..|++||+.+ ++
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 277 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGIL 277 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC
T ss_pred cccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCcc
Confidence 1124599999988763 22233 344578999999998887 2 56899999976 43
Q ss_pred eeEEEeccCCCcceEEEccCCCceEEEEecCCC---CeEEEEEcCCc---ceEEEecccc--ceeEEEecCCCCEEEEEc
Q 015198 164 LLHQIETLANLRGLCCLSHHSSTSVLACPGLQR---GQVRIEHFGLN---MIKLINAHDS--HIACFTLTLDGLLLATAS 235 (411)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d---g~i~i~~~~~~---~~~~~~~~~~--~i~~l~~sp~g~~l~s~s 235 (411)
....+..+..... ..+++ ++..|++.+..+ +.|.+++.... ....+..|.. .+..++|++++.++++..
T Consensus 278 ~~~~l~~~~~~~~-~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 278 KWVKLIDNFEGEY-DYVTN--EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp CCEEEECSSSSCE-EEEEE--ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred ceEEeeCCCCcEE-EEEec--cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 3555555544332 23444 444555544333 36777776653 2355555544 688899988888888888
Q ss_pred CCCe-EEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE-e---CCCcEEEEEccccc
Q 015198 236 TRGT-LIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA-S---DKGTVHIFSLRVRV 294 (411)
Q Consensus 236 ~dg~-~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s---~dg~I~vwd~~~~~ 294 (411)
.++. .|++||+.+|+.+..+.. +.+.+..+.++|++..|+.. + ..++|++||+.+++
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ECCEEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 8874 166778878887777776 56788999999999866533 2 34689999998876
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=1.7e-12 Score=118.44 Aligned_cols=246 Identities=9% Similarity=-0.027 Sum_probs=161.2
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEE
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~v 118 (411)
...+...+.+++|+++|++++++. ++.|.+|+.++.+...... .....+..+.+++++.++++...+. ...+.|.+
T Consensus 40 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~ 116 (333)
T 2dg1_A 40 ISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFA 116 (333)
T ss_dssp EESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTSCEEEEECTTS-SSCCEEEE
T ss_pred EeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCCcEEEEeCCCC-CCCceEEE
Confidence 445667789999999999887887 8999999988644322221 2345577888888887766654310 01148999
Q ss_pred EECCCCcEEEEEe---ecCceeEEEEcCCeEEEEE---------cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc
Q 015198 119 WDDHQSRCIGEFA---FRSDVRSVKLSRDRIVVVL---------EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST 186 (411)
Q Consensus 119 wd~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (411)
||..+++....+. ....+.++.++|++.+++. .+.|+.+|..+++....... .. ....+.+++++
T Consensus 117 ~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~--~~~~i~~~~dg 193 (333)
T 2dg1_A 117 ATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-IS--VANGIALSTDE 193 (333)
T ss_dssp ECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-ES--SEEEEEECTTS
T ss_pred EeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-CC--cccceEECCCC
Confidence 9988877654443 3457899999999987772 24577777655444332222 12 23456666777
Q ss_pred eEEEEecCCCCeEEEEEcC--CcceEEE-----ecc--ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 187 SVLACPGLQRGQVRIEHFG--LNMIKLI-----NAH--DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~--~~~~~~~-----~~~--~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
..|+++...++.|.+|+.. +.....+ ... ...+..++++++|+++++...++. |.+||. +++.+..+..
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~ 271 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILI 271 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEEC
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEc
Confidence 6565555567889988763 3333221 111 136788999999998888777888 999997 6777777764
Q ss_pred CCC----CcceEEEEeCCCCCEEEEEeCCC----cEEEEEcccc
Q 015198 258 GVD----RAEIYSIALSPNVQWLAVASDKG----TVHIFSLRVR 293 (411)
Q Consensus 258 ~~~----~~~v~~l~~spdg~~l~s~s~dg----~I~vwd~~~~ 293 (411)
... ...+.+++|+||++.|+.++.++ .-.||.++.+
T Consensus 272 ~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 272 PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 211 11588999999987777666553 3455555443
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.60 E-value=2.8e-13 Score=124.33 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=146.6
Q ss_pred CCeEEEEEcCCCCEEEEEe-C---Cc--EEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCC-C-------
Q 015198 45 IELISVSWNQDYGCFAAGT-S---CG--FRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS-Q------- 110 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-d---g~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-~------- 110 (411)
..+..++|+|||++|+... + +. |.+|++++.+..... .... +..+.|+|++..++....+. .
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~---~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKIL---EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEE---EESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEE---cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 4578899999999999877 3 34 666677664332222 2233 77888999886555443110 0
Q ss_pred --------------CCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE-E--c------C---eEEEEEcCCcee
Q 015198 111 --------------YPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV-L--E------H---KIYVYSFVDLKL 164 (411)
Q Consensus 111 --------------~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~--d------g---~i~iwd~~~~~~ 164 (411)
.....|.+||+.+++.+..+... .+..+.|+|++ +++ . + . .|+++| +++.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~ 210 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKE 210 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEE
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCce
Confidence 00267999999988874555444 88999999999 555 2 1 2 455555 5554
Q ss_pred eEEEeccCCCcceEEEccCCCceEEEEecCC-------CCeEEEEEcCCcceEEEeccccceeE-EEecCCCCEEEEEcC
Q 015198 165 LHQIETLANLRGLCCLSHHSSTSVLACPGLQ-------RGQVRIEHFGLNMIKLINAHDSHIAC-FTLTLDGLLLATAST 236 (411)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-------dg~i~i~~~~~~~~~~~~~~~~~i~~-l~~sp~g~~l~s~s~ 236 (411)
. .+..+ . ....+ ++++..|++.+.. ...|.+++ .++.......+...+.. +.|+ ++ ++++++.
T Consensus 211 ~-~l~~~-~--~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~ 281 (347)
T 2gop_A 211 E-KMFEK-V--SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFE 281 (347)
T ss_dssp E-EEEEE-E--SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEE
T ss_pred E-EeccC-c--ceeeE--CCCCCEEEEEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEec
Confidence 3 33333 2 33344 5566667665533 24677777 55444444556777886 9999 88 8999999
Q ss_pred CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcE-EEEEcc
Q 015198 237 RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTV-HIFSLR 291 (411)
Q Consensus 237 dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I-~vwd~~ 291 (411)
++. ++|| +.+++.. .+.. +...|.+++|+| .++++++.++.. .||.++
T Consensus 282 ~~~-~~l~-~~~g~~~-~~~~--~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 282 EGS-VNLY-IWDGEIK-PIAK--GRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp TTE-EEEE-EESSSEE-EEEC--SSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred CCc-EEEE-EcCCceE-EEec--CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 998 9999 8766654 3433 456899999999 677777777765 788876
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.60 E-value=7.7e-14 Score=129.01 Aligned_cols=235 Identities=12% Similarity=0.040 Sum_probs=153.9
Q ss_pred EEEEcCCCCEEEEEe-----------CCcEEEEecCCCcceEEeecCC----CCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 49 SVSWNQDYGCFAAGT-----------SCGFRIYNCEPFKETFRRDLKS----GGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-----------dg~i~iw~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
.++|+|||++|+++. ++.|.+||..+.+......+.. +......+.+++++.+++.+... .+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~---~~ 130 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS---PA 130 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES---SS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC---CC
Confidence 899999999999874 4569999998766555444321 11234457788888766554321 12
Q ss_pred CeEEEEECCCCcEEEE-EeecCceeEEEEcCCe--EEEE--EcCeEEEEEcCC-ceeeEEEe------ccCCCcceEEEc
Q 015198 114 TKVIIWDDHQSRCIGE-FAFRSDVRSVKLSRDR--IVVV--LEHKIYVYSFVD-LKLLHQIE------TLANLRGLCCLS 181 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~-~~~~~~i~~~~~~~~~--~~~~--~dg~i~iwd~~~-~~~~~~~~------~~~~~~~~~~~~ 181 (411)
+.|.+||+.+++.+.. +..... ..+.+.|++ .++. .||.+.+|++.. ++...... ....+ ..+.
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~---~~~~ 206 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP---IFIA 206 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC---BCSC
T ss_pred CeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc---eEEE
Confidence 8999999999988877 554332 234566654 3333 688899998864 55442221 11111 1111
Q ss_pred cCCCceEEEEecCCCCeEEEEEcCCcceEEEe---cc----------ccceeEEEecCCCCEEEEEcC-----------C
Q 015198 182 HHSSTSVLACPGLQRGQVRIEHFGLNMIKLIN---AH----------DSHIACFTLTLDGLLLATAST-----------R 237 (411)
Q Consensus 182 ~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~---~~----------~~~i~~l~~sp~g~~l~s~s~-----------d 237 (411)
+.+++..+++.. .++.|.+++........+. .. ......++|+|+++.++++.. .
T Consensus 207 ~~~~g~~~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 207 PALDKDKAHFVS-YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp CEECSSEEEEEB-TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred ecccCCEEEEEe-CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 222333444433 5788888776543322211 10 011223789999887776543 3
Q ss_pred CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc--ccCC
Q 015198 238 GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR--VVGE 297 (411)
Q Consensus 238 g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~--~~~~ 297 (411)
+. |.+||+.+++.+.++.. +. +.+++|+|||++|++++. +.|.|||..++ +...
T Consensus 286 ~~-v~viD~~t~~~v~~i~~--~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~ 341 (361)
T 2oiz_A 286 AE-IWVMDTKTKQRVARIPG--RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLR 341 (361)
T ss_dssp SE-EEEEETTTTEEEEEEEC--TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEE
T ss_pred ce-EEEEECCCCcEEEEEec--CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeE
Confidence 46 99999999999999987 33 899999999999998887 99999999998 6553
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=2.6e-13 Score=126.66 Aligned_cols=233 Identities=11% Similarity=-0.026 Sum_probs=147.0
Q ss_pred EEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEE-------------------EeccCCeEEEEec---
Q 015198 49 SVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVE-------------------MLFRCNILALVGA--- 105 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~s~--- 105 (411)
.+.|+|||++|+.+. ++.|.+|++++.+.......+.. .... ..++|++..++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 478999999999888 88899999987554333322122 1111 1233433332221
Q ss_pred --CCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcC-CeEEEE--Ec-------CeEEEEEcCCceeeEEEeccCC
Q 015198 106 --GDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSR-DRIVVV--LE-------HKIYVYSFVDLKLLHQIETLAN 173 (411)
Q Consensus 106 --~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~--~d-------g~i~iwd~~~~~~~~~~~~~~~ 173 (411)
..+ ..|.+||+.+++......+...+..+.|+| ++..++ .+ ..|++||+..++.. .+..+..
T Consensus 163 ~~~~~-----~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~ 236 (396)
T 3c5m_A 163 HTNPT-----CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAE 236 (396)
T ss_dssp HTCCC-----EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCT
T ss_pred cCCCc-----ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCC
Confidence 222 789999999988776666778899999999 777555 21 46899998665432 2222211
Q ss_pred CcceEEEccCCCceEEEEecCCC----CeEEEEEcCCcceEEEeccccceeEEEecC-CCCEEEEEc-------------
Q 015198 174 LRGLCCLSHHSSTSVLACPGLQR----GQVRIEHFGLNMIKLINAHDSHIACFTLTL-DGLLLATAS------------- 235 (411)
Q Consensus 174 ~~~~~~~~~~~~~~~l~~~g~~d----g~i~i~~~~~~~~~~~~~~~~~i~~l~~sp-~g~~l~s~s------------- 235 (411)
...+..+.+++++..|++.+..+ +.|++|+........+..... .. +.|+| +|++|++++
T Consensus 237 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 237 GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS-EE-EEEECSSSSEEEEEECCC----------
T ss_pred CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC-CC-CCccCCCCceEEEecCCcceeecccccc
Confidence 22345566777777666653222 448888876655444433222 23 88999 999888754
Q ss_pred ---CCCeEEEEEECCCCceEEEEeCCCCCc-----------ceEEEEeCCCCCEEEEEeC-CCcEEEEE--cccccc
Q 015198 236 ---TRGTLIRIFNTVDGTRLQEVRRGVDRA-----------EIYSIALSPNVQWLAVASD-KGTVHIFS--LRVRVV 295 (411)
Q Consensus 236 ---~dg~~I~vwd~~~~~~~~~~~~~~~~~-----------~v~~l~~spdg~~l~s~s~-dg~I~vwd--~~~~~~ 295 (411)
.+.. |++||+.+++.. .+.. +.. .+..++|+|||+.|+.++. ++...||. +.+++.
T Consensus 315 ~~~~~~~-i~~~d~~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~ 387 (396)
T 3c5m_A 315 NIENDPF-LYVLNTKAKSAQ-KLCK--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYK 387 (396)
T ss_dssp CCCCCCE-EEEEETTTTBCC-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC
T ss_pred ccCCCCc-EEEEecccCceE-EccC--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccccc
Confidence 2467 999999887754 3433 222 2566789999998887765 45555555 445443
No 183
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.60 E-value=7.7e-14 Score=141.52 Aligned_cols=192 Identities=10% Similarity=0.075 Sum_probs=136.0
Q ss_pred EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ecC-----ceeEEEEcCCeEEEE--Ec----------
Q 015198 90 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FRS-----DVRSVKLSRDRIVVV--LE---------- 151 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~-----~i~~~~~~~~~~~~~--~d---------- 151 (411)
...+.|++++.+++++ + +.|++||+.++++...+. +.. ....+.|+||++.++ .+
T Consensus 19 ~~~~~w~~dg~~~~~~--~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--E-----NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECSSSEEEEEE--T-----TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccEECCCCcEEEEc--C-----CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 3467899999988886 5 999999999999877766 321 234588999999887 22
Q ss_pred CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEe--ccccce----------
Q 015198 152 HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLIN--AHDSHI---------- 219 (411)
Q Consensus 152 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~--~~~~~i---------- 219 (411)
+.+++||+.+++... +..+.. ......++|+|+.||++ .++.|++|+........+. ++...+
T Consensus 92 ~~~~~~d~~~~~~~~-l~~~~~--~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EERIPN--NTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEEETTTTEECC-SSCCCT--TEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred eEEEEEECCCCcEEE-cccCCC--cceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 678899999987653 333333 45667777788888886 5789999887654444332 222212
Q ss_pred -------eEEEecCCCCEEEEEcCCC------------------------------------eEEEEEECCC---Cc--e
Q 015198 220 -------ACFTLTLDGLLLATASTRG------------------------------------TLIRIFNTVD---GT--R 251 (411)
Q Consensus 220 -------~~l~~sp~g~~l~s~s~dg------------------------------------~~I~vwd~~~---~~--~ 251 (411)
..+.|||||+.||.++.|. . |++||+.+ ++ .
T Consensus 167 ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~-l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVK-FFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEE-EEEEETTSCCSSSCCC
T ss_pred chhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeE-EEEEECCCCCCCCcce
Confidence 3489999999998875221 4 88899988 73 2
Q ss_pred EEEEeCC----CCCcceEEEEeCCCCCEEEEEeC----CCcEEEEEccccc
Q 015198 252 LQEVRRG----VDRAEIYSIALSPNVQWLAVASD----KGTVHIFSLRVRV 294 (411)
Q Consensus 252 ~~~~~~~----~~~~~v~~l~~spdg~~l~s~s~----dg~I~vwd~~~~~ 294 (411)
...+... .+...+..++|+|||++++.... +..|++||+.+++
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 3344321 15567999999999997765543 3369999999987
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=1.7e-12 Score=131.03 Aligned_cols=239 Identities=6% Similarity=-0.086 Sum_probs=152.1
Q ss_pred CCCCEEEEEe--CCc--EEEEecC--CCcceEEe---ec-CCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 54 QDYGCFAAGT--SCG--FRIYNCE--PFKETFRR---DL-KSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 54 ~~g~~la~g~--dg~--i~iw~~~--~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
|+|++++... .+. -.||..+ ........ .+ ..+...+..+.|+|++..++.+..+.......|++||+.+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 8899888655 222 2556554 22221111 11 1344567788999998777654332000113899999999
Q ss_pred CcEEEEEeecCceeEEEEcCCeEEEE---EcCe----------------EEEEEcCCceee--EEEeccCCCcceEEEcc
Q 015198 124 SRCIGEFAFRSDVRSVKLSRDRIVVV---LEHK----------------IYVYSFVDLKLL--HQIETLANLRGLCCLSH 182 (411)
Q Consensus 124 ~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~----------------i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~ 182 (411)
++.+........+..++|+||++.++ .++. |++|++.+++.. ..+...........+.+
T Consensus 161 g~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~ 240 (710)
T 2xdw_A 161 AKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAEL 240 (710)
T ss_dssp TEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEE
T ss_pred CCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEE
Confidence 98876544333477899999998777 3333 999999877532 22333333334566777
Q ss_pred CCCceEEEEecCC----CCeEEEEEcCC------c--ceEEEeccccceeEEEecCCCCEEEEEcC----CCeEEEEEEC
Q 015198 183 HSSTSVLACPGLQ----RGQVRIEHFGL------N--MIKLINAHDSHIACFTLTLDGLLLATAST----RGTLIRIFNT 246 (411)
Q Consensus 183 ~~~~~~l~~~g~~----dg~i~i~~~~~------~--~~~~~~~~~~~i~~l~~sp~g~~l~s~s~----dg~~I~vwd~ 246 (411)
++++++|++.... +..|++++... . ....+..+...+.. .|+|+|+.|+..+. ... |.+||+
T Consensus 241 SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~-l~~~d~ 318 (710)
T 2xdw_A 241 SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYR-LINIDF 318 (710)
T ss_dssp CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCE-EEEEET
T ss_pred cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCE-EEEEeC
Confidence 8888888765421 56788887764 2 46667777666655 48899987766554 236 999999
Q ss_pred CCCc--eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc--EEEEEccccc
Q 015198 247 VDGT--RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT--VHIFSLRVRV 294 (411)
Q Consensus 247 ~~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~--I~vwd~~~~~ 294 (411)
.++. ....+..+.....+..++|++++.++++...|+. |++|++.+++
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA 370 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC
Confidence 8774 2345554322236888999988888888888885 5566665554
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.56 E-value=2.4e-12 Score=114.23 Aligned_cols=213 Identities=10% Similarity=0.019 Sum_probs=158.2
Q ss_pred CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee-
Q 015198 55 DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF- 132 (411)
Q Consensus 55 ~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~- 132 (411)
.+++|++++ ++.|.+||.++++.+.+...+. ...+..+.+.+++.++++. + +.|..||. +++.+..+..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilvs~--~-----~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILFSY--S-----KGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEEEC--B-----SEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEEeC--C-----CCEEEECC-CCCEEEEEcCC
Confidence 357888888 9999999998878777765422 1345566778888888843 3 88999998 8999999884
Q ss_pred -cCceeEEEEcCCeEEEE-E---cCeEEEEEcCCceeeEEEeccCC---C-cceEEEccCCCceEEEEecCCCCeEEEEE
Q 015198 133 -RSDVRSVKLSRDRIVVV-L---EHKIYVYSFVDLKLLHQIETLAN---L-RGLCCLSHHSSTSVLACPGLQRGQVRIEH 203 (411)
Q Consensus 133 -~~~i~~~~~~~~~~~~~-~---dg~i~iwd~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~l~~~g~~dg~i~i~~ 203 (411)
...+.++.+.+++.+++ . ++.|..+|. +++.+..+..... . .....+.+.+++.++++ ...++.|..++
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~-~~~~~~v~~~d 152 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVP-LFATSEVREIA 152 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEE-ETTTTEEEEEC
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEE-ecCCCEEEEEC
Confidence 35788999999999888 2 456777774 7888877753211 0 01122334566777765 55789999999
Q ss_pred cCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC----CCcceEEEEeCCCCCEEEEE
Q 015198 204 FGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV----DRAEIYSIALSPNVQWLAVA 279 (411)
Q Consensus 204 ~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~----~~~~v~~l~~spdg~~l~s~ 279 (411)
..++.+..+... .....+.+.++|++++++..++. |..+|..+|+.+.++.... .-..+..++..++|.++++.
T Consensus 153 ~~G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 153 PNGQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TTSCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCCCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 888888887765 44567788899999999888888 9999999999999987421 11247888999999988876
Q ss_pred e
Q 015198 280 S 280 (411)
Q Consensus 280 s 280 (411)
.
T Consensus 231 ~ 231 (276)
T 3no2_A 231 W 231 (276)
T ss_dssp E
T ss_pred c
Confidence 3
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.56 E-value=8.8e-13 Score=116.42 Aligned_cols=236 Identities=8% Similarity=-0.066 Sum_probs=155.8
Q ss_pred CeEEEEEcCCCCEEE-EEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 46 ELISVSWNQDYGCFA-AGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 46 ~V~~l~~s~~g~~la-~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
...+++++++|++++ +.. ++.|.+|+..+..... ... .+......+.+++++.++++.. + +.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~~g~l~v~~~-~-----~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-LPF-NGLYQPQGLAVDGAGTVYVTDF-N-----NRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-CCC-CSCCSCCCEEECTTCCEEEEET-T-----TEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-Eee-CCcCCcceeEECCCCCEEEEcC-C-----CEEEEEeCCC
Confidence 678999999999776 434 8899999876533221 111 2223455677788777666655 5 8999999766
Q ss_pred CcEEEEEe--ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCe
Q 015198 124 SRCIGEFA--FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQ 198 (411)
Q Consensus 124 ~~~~~~~~--~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~ 198 (411)
+.. ..+. ....+..+++++++.+++ .++.|.+|+..+............ ....+..++++.++++ ...++.
T Consensus 97 ~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~p~~i~~~~~g~l~v~-~~~~~~ 172 (270)
T 1rwi_B 97 NNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLN--DPDGVAVDNSGNVYVT-DTDNNR 172 (270)
T ss_dssp SCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCC--SCCCEEECTTCCEEEE-EGGGTE
T ss_pred ceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCC--CceeEEEeCCCCEEEE-ECCCCE
Confidence 543 2332 235788999999987666 367899997655433221111112 2233444555555544 445678
Q ss_pred EEEEEcCCcceEEE-eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEE
Q 015198 199 VRIEHFGLNMIKLI-NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 199 i~i~~~~~~~~~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 277 (411)
|.+++..+...... ..+...+..++++++|.++++...++. |.+||....... .+... +...+.+++++++|++++
T Consensus 173 i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~-~~~~~-~~~~p~~i~~~~~g~l~v 249 (270)
T 1rwi_B 173 VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTST-VLPFT-GLNTPLAVAVDSDRTVYV 249 (270)
T ss_dssp EEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCE-ECCCC-SCSCEEEEEECTTCCEEE
T ss_pred EEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCcce-eeccC-CCCCceeEEECCCCCEEE
Confidence 88888776544332 223366789999999988887777888 999998655433 22211 234689999999999888
Q ss_pred EEeCCCcEEEEEccccccC
Q 015198 278 VASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 278 s~s~dg~I~vwd~~~~~~~ 296 (411)
+...++.|+++++...+..
T Consensus 250 ~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 250 ADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EEGGGTEEEEECCCGGGSC
T ss_pred EECCCCEEEEEcCCCcccc
Confidence 8889999999999887654
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=7.5e-12 Score=112.94 Aligned_cols=237 Identities=9% Similarity=0.020 Sum_probs=158.2
Q ss_pred CCCCCeEEEEEcCCCCEEEE-------Ee-CCcEEEEecCCCcceEEeec---CCCCEEEEEEeccCC-eEEEEecCCCC
Q 015198 42 VDEIELISVSWNQDYGCFAA-------GT-SCGFRIYNCEPFKETFRRDL---KSGGFRIVEMLFRCN-ILALVGAGDNS 109 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~-------g~-dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~l~s~~~d~ 109 (411)
+.-....+++|+++|.++++ +. ++.|.+|+..+.+.. .... ......+..+.++++ +.++++...
T Consensus 15 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-- 91 (314)
T 1pjx_A 15 EDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVADMR-- 91 (314)
T ss_dssp CCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEEETT--
T ss_pred ccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEEECC--
Confidence 33445689999999988887 45 899999997764432 2211 012245677888888 776666543
Q ss_pred CCCCCeEEEEECCCCcEEEE-Ee-----ecCceeEEEEcCCeEEEE-E--c---------------CeEEEEEcCCceee
Q 015198 110 QYPPTKVIIWDDHQSRCIGE-FA-----FRSDVRSVKLSRDRIVVV-L--E---------------HKIYVYSFVDLKLL 165 (411)
Q Consensus 110 ~~~d~~i~vwd~~~~~~~~~-~~-----~~~~i~~~~~~~~~~~~~-~--d---------------g~i~iwd~~~~~~~ 165 (411)
+.|.+||.. ++.... .. ....+.++++++++.+.+ . + +.|..||.. ++..
T Consensus 92 ----~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (314)
T 1pjx_A 92 ----LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI 165 (314)
T ss_dssp ----TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE
T ss_pred ----CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE
Confidence 579999987 765433 22 123588999999998777 2 2 467777765 5544
Q ss_pred EEEeccCCCcceEEEccC----CCceEEEEecCCCCeEEEEEcC--Cc-----ceEEEeccc-cceeEEEecCCCCEEEE
Q 015198 166 HQIETLANLRGLCCLSHH----SSTSVLACPGLQRGQVRIEHFG--LN-----MIKLINAHD-SHIACFTLTLDGLLLAT 233 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~l~~~g~~dg~i~i~~~~--~~-----~~~~~~~~~-~~i~~l~~sp~g~~l~s 233 (411)
........ ...+.++ +++..++++...++.|.+|+.. +. ....+..+. ..+..++++++|+++++
T Consensus 166 ~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~ 242 (314)
T 1pjx_A 166 QVDTAFQF---PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVA 242 (314)
T ss_dssp EEEEEESS---EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEE
T ss_pred EeccCCCC---cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEE
Confidence 33322221 2333444 6776665555567888887654 22 112222333 56788999999998888
Q ss_pred EcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEE-EeCCCcEEEEEcccc
Q 015198 234 ASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAV-ASDKGTVHIFSLRVR 293 (411)
Q Consensus 234 ~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s-~s~dg~I~vwd~~~~ 293 (411)
...++. |.+||..+++.+..+.. +...+.+++|+++|+.|++ ...++.|..|++...
T Consensus 243 ~~~~~~-i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 243 NWGSSH-IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTE-EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCE-EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 777888 99999887887777765 4467899999999995554 445678999998754
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.55 E-value=2.4e-13 Score=136.13 Aligned_cols=246 Identities=10% Similarity=-0.018 Sum_probs=151.1
Q ss_pred ccCCCCCCeE---------EEEEc--CCCCE-EEEEeC--CcEEEEecC--CCcceEEeecCC-----CCEEEEEEeccC
Q 015198 39 FSDVDEIELI---------SVSWN--QDYGC-FAAGTS--CGFRIYNCE--PFKETFRRDLKS-----GGFRIVEMLFRC 97 (411)
Q Consensus 39 ~~~~h~~~V~---------~l~~s--~~g~~-la~g~d--g~i~iw~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~ 97 (411)
....|...+. ...|+ |||++ |+.+.+ ..|.+++++ ....... +.. +...+..+.|+|
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~--l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRP--LTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEE--CSCCCCSTTCEEEEEEEEET
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEe--ccCCccCCCCccccCcEECC
Confidence 3445555555 56565 99998 887774 445555544 1022222 223 567788899999
Q ss_pred CeEEEEecCCCCC-----CCCCeEEEEECCC------CcEEEEE-eecCceeEEEEcCCeEEEE---Ec--------CeE
Q 015198 98 NILALVGAGDNSQ-----YPPTKVIIWDDHQ------SRCIGEF-AFRSDVRSVKLSRDRIVVV---LE--------HKI 154 (411)
Q Consensus 98 ~~~~l~s~~~d~~-----~~d~~i~vwd~~~------~~~~~~~-~~~~~i~~~~~~~~~~~~~---~d--------g~i 154 (411)
++..|+..+.+.. .....|++||+.+ ++..... .+...+..+.|+|||+.++ .+ ..|
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i 219 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEE
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEE
Confidence 9877766554200 0114899999988 6654444 4456788899999998877 23 379
Q ss_pred EEEEcC-Cc---eeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEE--EEcCCcceEEEeccccc---------e
Q 015198 155 YVYSFV-DL---KLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRI--EHFGLNMIKLINAHDSH---------I 219 (411)
Q Consensus 155 ~iwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i--~~~~~~~~~~~~~~~~~---------i 219 (411)
++||+. ++ +.......+.. ....+.+++++.++ +++..++...| ++........+..+... +
T Consensus 220 ~~~d~~~~g~~~~~~~l~~~~~~--~~~~~~~spdg~l~-~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~ 296 (662)
T 3azo_A 220 KTARVTEDGRFADTRTLLGGPEE--AIAQAEWAPDGSLI-VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGM 296 (662)
T ss_dssp EEEEECTTSCEEEEEEEEEETTB--CEEEEEECTTSCEE-EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTC
T ss_pred EEEEECCCCcccccEEeCCCCCc--eEcceEECCCCeEE-EEECCCCCeEEEEEECCCCceeecccccccccCccccccC
Confidence 999998 56 33333333333 44556667777744 45667784444 55434433333333222 4
Q ss_pred eEEEecCCCCEEEEEcCCCeEEEEE--ECCCCceEEEEeCCCCCcceEEE-EeCCCCCEEEEEeCCCc--EEEEEccccc
Q 015198 220 ACFTLTLDGLLLATASTRGTLIRIF--NTVDGTRLQEVRRGVDRAEIYSI-ALSPNVQWLAVASDKGT--VHIFSLRVRV 294 (411)
Q Consensus 220 ~~l~~sp~g~~l~s~s~dg~~I~vw--d~~~~~~~~~~~~~~~~~~v~~l-~~spdg~~l~s~s~dg~--I~vwd~~~~~ 294 (411)
..++|+|+++++++++. +. ++|| |+.+++ +..+.. +...+..+ +++.+.-++++++.+.. |.+||+.+++
T Consensus 297 ~~~~~~~~~~~~~~~~~-~~-~~l~~~d~~~~~-~~~l~~--~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK-GA-AVLGILDPESGE-LVDAAG--PWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp CSEEECTTSCEEEEEBS-SS-CEEEEEETTTTE-EEECCS--SCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred ceEeEeCCCEEEEEEEc-Cc-cEEEEEECCCCc-EEEecC--CCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 67899999999999998 88 8888 655554 556655 55567766 55443334445555544 5555665655
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=4.1e-12 Score=115.79 Aligned_cols=236 Identities=11% Similarity=-0.024 Sum_probs=159.6
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
.....+.+.. ++++++.. ++.|.+||..+.+.+.... .......+.+++++.++++...+ +.|.+||..+
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~---~~~~p~~i~~~~~g~lyv~~~~~-----~~v~~iD~~t 114 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT---GFTSPRYIHFLSDEKAYVTQIWD-----YRIFIINPKT 114 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE---CCSSEEEEEEEETTEEEEEEBSC-----SEEEEEETTT
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC---CCCCCcEEEEeCCCeEEEEECCC-----CeEEEEECCC
Confidence 3456777743 44444444 8999999999866544442 23345566776777777776455 9999999999
Q ss_pred CcEEEEEeecC------ceeEEEEcCCeEEEEE---cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 124 SRCIGEFAFRS------DVRSVKLSRDRIVVVL---EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 124 ~~~~~~~~~~~------~i~~~~~~~~~~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
++....+.... ....+++.....+++. ++.|.++|+.+++.+..+.....+ ..+..++++.+++.+..
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQP---TSLVMDKYNKMWTITDG 191 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCB---CCCEECTTSEEEEEBCC
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCc---cceEEcCCCCEEEEECC
Confidence 99888887544 6677888444444442 789999999999988888764433 23444666776655332
Q ss_pred C---------CCeEEEEEcCC-cceEEEecc-ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcc
Q 015198 195 Q---------RGQVRIEHFGL-NMIKLINAH-DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAE 263 (411)
Q Consensus 195 ~---------dg~i~i~~~~~-~~~~~~~~~-~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~ 263 (411)
. .+.|.+++... +....+... ......++|+|++++|+++.. . |.+||..+++.............
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecCCCCc
Confidence 2 26788877654 444455432 236789999999998888765 7 99999988875321111001346
Q ss_pred eEEEEeCC-CCCEEEEE----eCCCcEEEEEccccccC
Q 015198 264 IYSIALSP-NVQWLAVA----SDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 264 v~~l~~sp-dg~~l~s~----s~dg~I~vwd~~~~~~~ 296 (411)
...++++| +++++++. ..++.|.+||.+ ++..
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 88999999 55555555 567899999998 6644
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.54 E-value=4e-12 Score=113.96 Aligned_cols=193 Identities=8% Similarity=0.002 Sum_probs=131.8
Q ss_pred CCEEEEEEeccCCeE-EEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-E--cCeEEEEEcC
Q 015198 86 GGFRIVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-L--EHKIYVYSFV 160 (411)
Q Consensus 86 ~~~~~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~--dg~i~iwd~~ 160 (411)
+......+.|++++. +++++..+ +.|..||..++ ...+. +...+.++++++++.+++ . ++.|.+||..
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred CCccccCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 334456778888875 55665555 89999998877 55555 567789999999998777 3 5789999998
Q ss_pred CceeeEEEeccCCC--cceEEEccCCCceEEEEe---cC-------------CCCeEEEEEcCCcceEEEeccccceeEE
Q 015198 161 DLKLLHQIETLANL--RGLCCLSHHSSTSVLACP---GL-------------QRGQVRIEHFGLNMIKLINAHDSHIACF 222 (411)
Q Consensus 161 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~---g~-------------~dg~i~i~~~~~~~~~~~~~~~~~i~~l 222 (411)
+++........... .....+..++++.++++. |. ..+.|..++.. .....+..+......+
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi 177 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGL 177 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccE
Confidence 87755433221110 122345556677766642 21 12345555544 3445555666777899
Q ss_pred EecCCCCEEEEEcCCCeEEEEEECC-CCce---EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 223 TLTLDGLLLATASTRGTLIRIFNTV-DGTR---LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 223 ~~sp~g~~l~s~s~dg~~I~vwd~~-~~~~---~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
+|+|+|++|++.+.++. |++||+. +++. ...+ . .+...+..++++++|+++++. ++.|.+|+.+
T Consensus 178 ~~s~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~-~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 178 AFLPSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-T-VEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EECTTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-C-CSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred EECCCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-e-CCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 99999998877777888 9999987 5554 3344 2 245567789999999976665 7789999976
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=1.1e-12 Score=121.36 Aligned_cols=257 Identities=9% Similarity=-0.000 Sum_probs=160.7
Q ss_pred CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCC-----CCCCCeEEEEECCCCcEEEEEee------
Q 015198 64 SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNS-----QYPPTKVIIWDDHQSRCIGEFAF------ 132 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~-----~~~d~~i~vwd~~~~~~~~~~~~------ 132 (411)
|+.|.+||..+.+...... .+.. . .+.+++++..+..+.... .-.++.|.+||+.+++.+.++..
T Consensus 30 d~~v~v~D~~t~~~~~~i~--~g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~ 105 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVP--TAFN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ 105 (361)
T ss_dssp GCEEEEEETTTCCEEEEEE--CCEE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC
T ss_pred cCeEEEEECCCCeEEEEec--CCCC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc
Confidence 6789999988766544332 3433 3 888999886655543100 00127899999999999988873
Q ss_pred -cCceeEEEEcCCeEEEE---E--cCeEEEEEcCCceeeEE-EeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC
Q 015198 133 -RSDVRSVKLSRDRIVVV---L--EHKIYVYSFVDLKLLHQ-IETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG 205 (411)
Q Consensus 133 -~~~i~~~~~~~~~~~~~---~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~ 205 (411)
......++++||+++++ . ++.|.+||+.+++.+.. +..... ....+.+.+...+++ .+.||.+.++...
T Consensus 106 ~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~--~~v~~~p~~~~~~~~--~~~dg~~~~v~~~ 181 (361)
T 2oiz_A 106 GLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC--WSVIPQPNRPRSFMT--ICGDGGLLTINLG 181 (361)
T ss_dssp BCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE--EEEEECTTSSSEEEE--EETTSSEEEEEEC
T ss_pred cCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc--ceeEEcCCCCeeEEE--ECCCCcEEEEEEC
Confidence 24567899999998776 2 57899999999988776 443211 123344544333333 3357777775543
Q ss_pred --CcceEE------EeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce--EEEEeCCC--------CCcceEEE
Q 015198 206 --LNMIKL------INAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR--LQEVRRGV--------DRAEIYSI 267 (411)
Q Consensus 206 --~~~~~~------~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~--~~~~~~~~--------~~~~v~~l 267 (411)
++.... +..+..++ .+.+++++..++..+.++. |.++|+..... +..+.... .......+
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~ 259 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLV 259 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCE
T ss_pred CCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCe-EEEEEecCCCceecccccccCccccccccccCCeeEE
Confidence 332211 11222222 2334677877777888898 99999875542 22222100 00111237
Q ss_pred EeCCCCCEEEEEeC-----------CCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCccc
Q 015198 268 ALSPNVQWLAVASD-----------KGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLS 336 (411)
Q Consensus 268 ~~spdg~~l~s~s~-----------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (411)
+|+||++.++++.. .+.|.+||+.+++..
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v---------------------------------------- 299 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRV---------------------------------------- 299 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEE----------------------------------------
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEE----------------------------------------
Confidence 89999888877643 347999999988753
Q ss_pred ccccccCcccccccceEEEEeCCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 337 FMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.++.++. ...++|+++ +.|++++ ++.|.+|....
T Consensus 300 ----------------~~i~~~~--p~~ia~spdg~~l~v~n-~~~v~v~D~~t 334 (361)
T 2oiz_A 300 ----------------ARIPGRD--ALSMTIDQQRNLMLTLD-GGNVNVYDISQ 334 (361)
T ss_dssp ----------------EEEECTT--CCEEEEETTTTEEEEEC-SSCEEEEECSS
T ss_pred ----------------EEEecCC--eeEEEECCCCCEEEEeC-CCeEEEEECCC
Confidence 2455544 556789998 5555555 59999996554
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.54 E-value=1.3e-10 Score=103.82 Aligned_cols=233 Identities=7% Similarity=-0.046 Sum_probs=160.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 42 VDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
.....+.++++.++|+++++.. ++.|.+|+.+ .+ .....+......+..+.+.+++.++++...+ +.|..+|
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~v~~~d 89 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR-IKEFEVPTPDAKVMCLIVSSLGDIWFTENGA-----NKIGKLS 89 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEEC
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc-eEEEECCCCCCcceeEEECCCCCEEEEecCC-----CeEEEEC
Confidence 3456789999999999888776 8999999977 23 2333333334567778888888777776554 8899999
Q ss_pred CCCCcEEEEEe---ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 121 DHQSRCIGEFA---FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 121 ~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
.. ++.. .+. ....+.++++.+++.+.+ .++.|..+|.. ++.. .+...........+..++++.+.++ ..
T Consensus 90 ~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~-~~ 164 (300)
T 2qc5_A 90 KK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFT-EN 164 (300)
T ss_dssp TT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEE-ET
T ss_pred CC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEE-ec
Confidence 77 6543 333 246788999999887766 26789999987 5544 2322212224556666777775544 44
Q ss_pred CCCeEEEEEcCCcceEEEe--ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCC
Q 015198 195 QRGQVRIEHFGLNMIKLIN--AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPN 272 (411)
Q Consensus 195 ~dg~i~i~~~~~~~~~~~~--~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spd 272 (411)
.++.|..++..++... +. .+...+..++++++|+++++....+. |.+||. +++... +........+.+++++++
T Consensus 165 ~~~~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~ 240 (300)
T 2qc5_A 165 QNNSIGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISE-YDIPTPNARPHAITAGKN 240 (300)
T ss_dssp TTTEEEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEECST
T ss_pred CCCeEEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEE-EECCCCCCCceEEEECCC
Confidence 5677887776544333 32 33456889999999988777777788 999998 565443 222113456899999999
Q ss_pred CCEEEEEeCCCcEEEEEc
Q 015198 273 VQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 273 g~~l~s~s~dg~I~vwd~ 290 (411)
|+++++...++.|..|+.
T Consensus 241 g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 241 SEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TCEEEEETTTTEEEEECT
T ss_pred CCEEEeccCCCeEEEECC
Confidence 997766666788999987
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=1.4e-11 Score=120.06 Aligned_cols=228 Identities=11% Similarity=0.064 Sum_probs=155.4
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC--CCcEEEEEee
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH--QSRCIGEFAF 132 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~--~~~~~~~~~~ 132 (411)
+.++++.. ++.|.++|.++.+.+..... ......+.+++++.++..++.+ +.|.+||+. +++.+..+..
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~---g~~p~~v~~SpDGr~lyv~~~d-----g~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVIGRD-----GKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEEETT-----SEEEEEETTSSSCCEEEEEEC
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeC---CCCccceEECCCCCEEEEEcCC-----CeEEEEECCCCCCcEeEEEec
Confidence 34444555 89999999998665554443 2234477899998777666666 999999985 8888888886
Q ss_pred cCceeEEEEc----CCeEEEE----EcCeEEEEEcCCceeeEEEeccCC---------CcceEEEccCCCceEEEEecCC
Q 015198 133 RSDVRSVKLS----RDRIVVV----LEHKIYVYSFVDLKLLHQIETLAN---------LRGLCCLSHHSSTSVLACPGLQ 195 (411)
Q Consensus 133 ~~~i~~~~~~----~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~g~~ 195 (411)
......++|+ |||++++ .++.|.++|..+.+.+..+..... ...+..+..++++..+++.-..
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 6677899999 6987766 679999999999999888764211 1123344444444444444567
Q ss_pred CCeEEEEEcCCcc---eEEEeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeC-CC--CCcceEEEE
Q 015198 196 RGQVRIEHFGLNM---IKLINAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRR-GV--DRAEIYSIA 268 (411)
Q Consensus 196 dg~i~i~~~~~~~---~~~~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~-~~--~~~~v~~l~ 268 (411)
.|.|.+.+..... +..+ ........+.|+|+|++|+++. .++. |.++|+.+++.+..+.. +. |.+.-..+
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~-V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~- 395 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNK-LVVIDTKEGKLVAIEDTGGQTPHPGRGANF- 395 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSSBCCTTCEEE-
T ss_pred CCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCe-EEEEECCCCcEEEEEeccCcCCCCccceee-
Confidence 7888886655421 2222 2334566889999999887665 4666 99999999998877765 32 32222222
Q ss_pred eCCCCCEE-EEEe-CCCcEEEEEccccc
Q 015198 269 LSPNVQWL-AVAS-DKGTVHIFSLRVRV 294 (411)
Q Consensus 269 ~spdg~~l-~s~s-~dg~I~vwd~~~~~ 294 (411)
++|++..+ +++. .++.|.++|..+++
T Consensus 396 ~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 396 VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 57875544 4443 46889999998743
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.53 E-value=8.4e-13 Score=132.92 Aligned_cols=231 Identities=11% Similarity=-0.006 Sum_probs=148.5
Q ss_pred cCCCCEEEEEe-CC---cEEEEecC--CCcceEEeec----CCCCEEEEEEeccCCeEEEE-----ecCCCCCCCCCeEE
Q 015198 53 NQDYGCFAAGT-SC---GFRIYNCE--PFKETFRRDL----KSGGFRIVEMLFRCNILALV-----GAGDNSQYPPTKVI 117 (411)
Q Consensus 53 s~~g~~la~g~-dg---~i~iw~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~-----s~~~d~~~~d~~i~ 117 (411)
+|+|++++... ++ .-.||..+ .......... ..+...+..+.|+|++..++ +++++ ..|+
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~-----~~i~ 150 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADE-----AVLH 150 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSC-----CEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCce-----EEEE
Confidence 37899888766 43 35566654 2222111111 13455788899999998887 55555 8999
Q ss_pred EEECCCCcEE-EEEeecCceeEEEEcCCeEEEE---EcCe-------------EEEEEcCCcee--eEEEeccCCCcceE
Q 015198 118 IWDDHQSRCI-GEFAFRSDVRSVKLSRDRIVVV---LEHK-------------IYVYSFVDLKL--LHQIETLANLRGLC 178 (411)
Q Consensus 118 vwd~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~---~dg~-------------i~iwd~~~~~~--~~~~~~~~~~~~~~ 178 (411)
+||+.+++.+ ...........++|+||++.++ .+.. |++|++.+++. ...+..........
T Consensus 151 v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~ 230 (695)
T 2bkl_A 151 VIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL 230 (695)
T ss_dssp EEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE
T ss_pred EEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE
Confidence 9999999864 2111111226899999998777 3443 99999987763 22333333333556
Q ss_pred EEccCCCceEEEEecCCC-C--eEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEc---CCCeEEEEEECCCCce-
Q 015198 179 CLSHHSSTSVLACPGLQR-G--QVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAS---TRGTLIRIFNTVDGTR- 251 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~d-g--~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s---~dg~~I~vwd~~~~~~- 251 (411)
.+.+++++++|+++...+ + .|++++........+..+...+....+ ++|.+++.+. .++. |.+||+.+++.
T Consensus 231 ~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~-l~~~d~~~~~~~ 308 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQR-VFEVDPAKPARA 308 (695)
T ss_dssp EEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCE-EEEEBTTBCSGG
T ss_pred EEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCE-EEEEeCCCCCcc
Confidence 777788888887755333 3 455554444456667667666666666 5666444444 2577 99999987753
Q ss_pred -EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 252 -LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 252 -~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
...+..+.....+..++|+ ++.++++...|+..+||.++
T Consensus 309 ~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 309 SWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp GCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2344442224568889998 67788889999988888776
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=2e-13 Score=137.54 Aligned_cols=245 Identities=8% Similarity=-0.084 Sum_probs=156.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe------CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCC----
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT------SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQ---- 110 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~---- 110 (411)
.+|...+..++|||||++||.+. +..|++||+++++......+.. .....+.|++++..|+.++.+..
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG--GKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC--CTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc--ccccceEEecCCCEEEEEEecCCCCCc
Confidence 45666799999999999999544 3579999999865430111211 11146789999877766655411
Q ss_pred ----CCCCeEEEEECCCCcE--EEEEe---ecCceeEEEEcCCeEEEE---EcC----eEEEEEcCCceeeEEEeccCCC
Q 015198 111 ----YPPTKVIIWDDHQSRC--IGEFA---FRSDVRSVKLSRDRIVVV---LEH----KIYVYSFVDLKLLHQIETLANL 174 (411)
Q Consensus 111 ----~~d~~i~vwd~~~~~~--~~~~~---~~~~i~~~~~~~~~~~~~---~dg----~i~iwd~~~~~~~~~~~~~~~~ 174 (411)
.....|++|++.+++. ...+. +...+..+.|+|||++++ .++ .|++|+..+++. ..+..+...
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 0123499999988762 23333 345788999999998877 344 677777655543 344333332
Q ss_pred cceEEEccCCCceEEEEecC---CCCeEEEEEcCCcc---eEEEecc--ccceeEEEecCCCCEEEEEcCCCeEEEEEEC
Q 015198 175 RGLCCLSHHSSTSVLACPGL---QRGQVRIEHFGLNM---IKLINAH--DSHIACFTLTLDGLLLATASTRGTLIRIFNT 246 (411)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~g~---~dg~i~i~~~~~~~---~~~~~~~--~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~ 246 (411)
..... + +++.+ ++.+. .++.|.+|+..... ...+..+ ...+..++|+ ++.++++...|+. .+||.+
T Consensus 274 ~~~~~--~-~~g~l-~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~ 347 (695)
T 2bkl_A 274 KYEVH--A-WKDRF-YVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVA 347 (695)
T ss_dssp CEEEE--E-ETTEE-EEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEE
T ss_pred eEEEE--e-cCCcE-EEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEE
Confidence 22222 2 23343 33333 25778888775433 2444433 4567888888 7778888888988 777755
Q ss_pred C-CCceEEEEeCCCCCcceEEEEeCCCCCEEEEEe----CCCcEEEEEcccccc
Q 015198 247 V-DGTRLQEVRRGVDRAEIYSIALSPNVQWLAVAS----DKGTVHIFSLRVRVV 295 (411)
Q Consensus 247 ~-~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s----~dg~I~vwd~~~~~~ 295 (411)
. +++.+..+... ..+.+..++++|+++.|+... ..++|++||+.+++.
T Consensus 348 ~~~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 348 TLKGKPVRTVQLP-GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTCCEEEECCCS-SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred eCCCCeeEEecCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4 46656555532 256788889999998776333 346899999988763
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=2.9e-10 Score=110.74 Aligned_cols=236 Identities=15% Similarity=0.071 Sum_probs=158.5
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecC--CCcceEEeecCCCCEEEEEEecc----CCeEEEE-ecCCCCCCCCCeE
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCE--PFKETFRRDLKSGGFRIVEMLFR----CNILALV-GAGDNSQYPPTKV 116 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~-s~~~d~~~~d~~i 116 (411)
..+..+.|+|||+++++++ ++.|.+||+. +.+...... . ......+.++ |++.+++ +...+ +.|
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~--~-G~~P~~ia~s~~~~pDGk~l~v~n~~~-----~~v 268 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK--I-GSEARSIETSKMEGWEDKYAIAGAYWP-----PQY 268 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE--C-CSEEEEEEECCSTTCTTTEEEEEEEET-----TEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe--c-CCCCceeEEccccCCCCCEEEEEEccC-----CeE
Confidence 3567999999999999989 9999999995 544443332 2 2345677788 5775444 43333 999
Q ss_pred EEEECCCCcEEEEEeec------------CceeEEEEcCCeEEEE----EcCeEEEEEcCCceeeEEEeccCCCcceEEE
Q 015198 117 IIWDDHQSRCIGEFAFR------------SDVRSVKLSRDRIVVV----LEHKIYVYSFVDLKLLHQIETLANLRGLCCL 180 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 180 (411)
.++|..+.+.+..+... ..+..+..++++..++ .+|.|.++|..+.+.+........ .....+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~-~~~~d~ 347 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE-RFLHDG 347 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC-SSEEEE
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc-ccccCc
Confidence 99999999999887621 2567888888755444 579999999877543332222111 133455
Q ss_pred ccCCCceEEEEecCCCCeEEEEEcCC-cceEEEec-----cccceeEEEecCCCC-EEEEEc-CCCeEEEEEECCC----
Q 015198 181 SHHSSTSVLACPGLQRGQVRIEHFGL-NMIKLINA-----HDSHIACFTLTLDGL-LLATAS-TRGTLIRIFNTVD---- 248 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~dg~i~i~~~~~-~~~~~~~~-----~~~~i~~l~~sp~g~-~l~s~s-~dg~~I~vwd~~~---- 248 (411)
.+++++++++++...++.|.+++... +.+..+.. |.+.-..+ ++|++. .++++. .++. |.++|..+
T Consensus 348 ~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~-Vsvid~~~~~~~ 425 (567)
T 1qks_A 348 GLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDS-VALIGTDPEGHP 425 (567)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCT
T ss_pred eECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCe-EEEecCCCCCCc
Confidence 66777787776666778899866554 44444443 32212122 578754 444443 4578 99999987
Q ss_pred ---CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeC-------CCcEEEEEcccc
Q 015198 249 ---GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASD-------KGTVHIFSLRVR 293 (411)
Q Consensus 249 ---~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~-------dg~I~vwd~~~~ 293 (411)
.+.+.++... ...-..+..+|++++|.+... .+.|.|+|+.+.
T Consensus 426 ~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 426 DNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred cccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 6778888753 222344778999999988763 358999999987
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.45 E-value=1.2e-10 Score=107.86 Aligned_cols=234 Identities=9% Similarity=-0.033 Sum_probs=151.8
Q ss_pred EEEEcCCCCEEEEEe-----------CCcEEEEecCCCcceEEeecCCC-----CEEEEEEeccCCeEEEEecCCCCCCC
Q 015198 49 SVSWNQDYGCFAAGT-----------SCGFRIYNCEPFKETFRRDLKSG-----GFRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-----------dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
.++++|||++|+++. ++.|.+||..+.+......+... ......+.++|++..+..+... .
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---~ 146 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---A 146 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC---C
Confidence 899999999999874 46799999987665554443200 1223467889998777665431 1
Q ss_pred CCeEEEEECCCCcEEEE-EeecCceeEEEEcCCe--EEEE--EcCeEEEEEcCCceeeEEEe-----ccCCCcc-eEEEc
Q 015198 113 PTKVIIWDDHQSRCIGE-FAFRSDVRSVKLSRDR--IVVV--LEHKIYVYSFVDLKLLHQIE-----TLANLRG-LCCLS 181 (411)
Q Consensus 113 d~~i~vwd~~~~~~~~~-~~~~~~i~~~~~~~~~--~~~~--~dg~i~iwd~~~~~~~~~~~-----~~~~~~~-~~~~~ 181 (411)
++.|.++| .+++.+.. +..... +.+.+++ .++. .||.+.++|. +++...... ....++. ...+.
T Consensus 147 ~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 147 GPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred CCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 27899999 99999888 665443 3344443 2233 7899999999 877664332 1111110 01122
Q ss_pred cCCCceEEEEecCCCCeEEEEEcCCcc---eEEEec----------cccceeEEEecCCCCEEEEEcC----------CC
Q 015198 182 HHSSTSVLACPGLQRGQVRIEHFGLNM---IKLINA----------HDSHIACFTLTLDGLLLATAST----------RG 238 (411)
Q Consensus 182 ~~~~~~~l~~~g~~dg~i~i~~~~~~~---~~~~~~----------~~~~i~~l~~sp~g~~l~s~s~----------dg 238 (411)
.... .++ +.. ..+.+.+.+..... +..+.. .......+.++|+++.|+++.. .+
T Consensus 222 ~~~~-~~~-~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 222 NKSG-RIV-WPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred ecCC-EEE-EEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 2222 223 323 46677775543321 122211 1122344789999988777643 35
Q ss_pred eEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC-EEEEEe-CCCcEEEEEccccccCC
Q 015198 239 TLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ-WLAVAS-DKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 239 ~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~s-~dg~I~vwd~~~~~~~~ 297 (411)
. |.++|+.+++.+.++..+ ....+++|+|||+ +|+++. .++.|.|||+.+++...
T Consensus 299 ~-V~VID~~t~~vv~~i~~g---~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 299 E-VTSVTGLVGQTSSQISLG---HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred e-EEEEECCCCEEEEEEECC---CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 6 999999999999998753 3588999999999 777777 58999999999998764
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.44 E-value=6.5e-10 Score=99.15 Aligned_cols=235 Identities=8% Similarity=-0.047 Sum_probs=157.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC
Q 015198 43 DEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
+...+.++++.++|.++++.. ++.|..|+.+. ......+......+..+.+.+++.++++...+ +.|.+||.
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~ 127 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKG--IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD 127 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTS--CEEEEECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCC--cEEEEeCCCcCCCceeeEECCCCCEEEEecCC-----ceEEEECC
Confidence 456799999999999888777 78899998762 22222222234567778888888777776555 89999997
Q ss_pred CCCcEEEEEe--ecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 122 HQSRCIGEFA--FRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 122 ~~~~~~~~~~--~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
+++...... ....+..+++.+++.+.+ .++.|..||. +++... +...........+..++++.+.++ ...+
T Consensus 128 -~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~-~~~~ 203 (299)
T 2z2n_A 128 -DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFV-EIIG 203 (299)
T ss_dssp -TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEE-ETTT
T ss_pred -CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEE-ccCC
Confidence 665443222 345688999999987776 3578999998 665543 322222224556667777766554 3356
Q ss_pred CeEEEEEcCCcceEEE--eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC
Q 015198 197 GQVRIEHFGLNMIKLI--NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ 274 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~--~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 274 (411)
+.|.+++..+. ...+ ..+...+..++++++|+++++...++. |.+||. +++ +..+....+...+.++++ ++|+
T Consensus 204 ~~i~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~ 278 (299)
T 2z2n_A 204 NKIGRITTSGE-ITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGET 278 (299)
T ss_dssp TEEEEECTTCC-EEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSC
T ss_pred ceEEEECCCCc-EEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cCCC
Confidence 78888777444 3333 234567889999999997777667788 999998 554 334432224457899999 8888
Q ss_pred EEEEEeCCCcEEEEEccccc
Q 015198 275 WLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 275 ~l~s~s~dg~I~vwd~~~~~ 294 (411)
++++.. .+.|..++.++++
T Consensus 279 l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 279 IWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp EEEEET-TTEEEEEEEC---
T ss_pred EEEEec-CCcEEEEEcCccc
Confidence 766655 5668888877653
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=7.8e-11 Score=110.56 Aligned_cols=237 Identities=9% Similarity=-0.009 Sum_probs=153.5
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 44 EIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
-.....|+|+++++++++.. ++.|++|+.++........ ..... . +.+++++..++.+..+ ....|.+|+..
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~--~~~~~-~-ia~~~~g~~l~~~d~~---~~~~I~~~d~~ 202 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHP--GFKGG-K-PAVTKDKQRVYSIGWE---GTHTVYVYMKA 202 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEE--TCCBC-B-CEECTTSSEEEEEBSS---TTCEEEEEEGG
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeec--cCCCC-c-eeEecCCCcEEEEecC---CCceEEEEEcC
Confidence 34678999999999777777 7999999998644322222 22222 2 6677776554444432 00289999977
Q ss_pred CCcEEEEE----e-ecCceeEEEEcC-CeEEEE--EcCeEEEEEcCCceeeEE----EeccCCCcceE-EEccCCCceEE
Q 015198 123 QSRCIGEF----A-FRSDVRSVKLSR-DRIVVV--LEHKIYVYSFVDLKLLHQ----IETLANLRGLC-CLSHHSSTSVL 189 (411)
Q Consensus 123 ~~~~~~~~----~-~~~~i~~~~~~~-~~~~~~--~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~l 189 (411)
.+.....+ . ....+.+++++| ++.+++ .++.|+.||..++..... ...... .... .+.+++++..|
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~-~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLG-TNPGPYLIYYFVDSNF 281 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCC-CSSCCEEEEETTTTEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCC-CCccccEEEeCCCCEE
Confidence 66654444 2 345678899999 676666 567899999987653222 111111 1101 44455532334
Q ss_pred EEecCCCCeEEEEEcCCcceEEEeccc---------------cceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEE
Q 015198 190 ACPGLQRGQVRIEHFGLNMIKLINAHD---------------SHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQ 253 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~~~~~~~~~~~~---------------~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~ 253 (411)
.++...++.|+.++.++. +..+.++. .....++++++|+++++-. .++. |+.||+.+++..
T Consensus 282 yv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v~- 358 (409)
T 3hrp_A 282 YMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYVS- 358 (409)
T ss_dssp EEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEEE-
T ss_pred EEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEEE-
Confidence 444556788888887765 33343332 3467899999999777777 7788 999998777653
Q ss_pred EEeCC-C------------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 254 EVRRG-V------------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 254 ~~~~~-~------------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
++.+. . .-.....++++++|.++++-..++.|+.++++
T Consensus 359 ~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 359 TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 44331 0 02358899999998888888888889888763
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.42 E-value=1.1e-10 Score=105.23 Aligned_cols=195 Identities=7% Similarity=-0.014 Sum_probs=126.6
Q ss_pred EEEEeccCCeEEEEe-------cCCCCCCCCCeEEEEECCCCcEEEEEe-----ecCceeEEEEcCC-eEEEE--EcCeE
Q 015198 90 IVEMLFRCNILALVG-------AGDNSQYPPTKVIIWDDHQSRCIGEFA-----FRSDVRSVKLSRD-RIVVV--LEHKI 154 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s-------~~~d~~~~d~~i~vwd~~~~~~~~~~~-----~~~~i~~~~~~~~-~~~~~--~dg~i 154 (411)
...+.|++++.++++ +..+ +.|.+||..+++...... +...+.++.++++ +.+++ .++.|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l 94 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPA-----GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGL 94 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEEC-----CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCC-----CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCE
Confidence 345667777776666 4444 899999988887654332 3467899999999 87555 34589
Q ss_pred EEEEcCCceeeEE-EeccC--CCcceEEEccCCCceEEEEecCCC---------------CeEEEEEcCCcceEEEeccc
Q 015198 155 YVYSFVDLKLLHQ-IETLA--NLRGLCCLSHHSSTSVLACPGLQR---------------GQVRIEHFGLNMIKLINAHD 216 (411)
Q Consensus 155 ~iwd~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~~g~~d---------------g~i~i~~~~~~~~~~~~~~~ 216 (411)
.+||.. ++.... ..... .......+..++++.++++.. .+ +.|..++..++ ...+..+.
T Consensus 95 ~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~ 171 (314)
T 1pjx_A 95 LVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAP-AGEVAPADYTRSMQEKFGSIYCFTTDGQ-MIQVDTAF 171 (314)
T ss_dssp EEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEEC-BCBCTTSCCCBTTSSSCEEEEEECTTSC-EEEEEEEE
T ss_pred EEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEec-CcccccccccccccCCCCeEEEECCCCC-EEEeccCC
Confidence 999987 665432 21111 111244566666776665533 33 45555655533 33333344
Q ss_pred cceeEEEec----CCCCEEEEE-cCCCeEEEEEECC-CCce-----EEEEeCCCCC-cceEEEEeCCCCCEEEEEeCCCc
Q 015198 217 SHIACFTLT----LDGLLLATA-STRGTLIRIFNTV-DGTR-----LQEVRRGVDR-AEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 217 ~~i~~l~~s----p~g~~l~s~-s~dg~~I~vwd~~-~~~~-----~~~~~~~~~~-~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
.....++++ |+|+.|+.+ ..++. |.+||+. +++. ...+.. +. ..+..++++++|+++++...++.
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~-i~~~~~~~~g~~~~~~~~~~~~~--~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKK-LWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTE-EEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCe-EEEEECCCCCccccceEEEECCC--CCCCCCCceEECCCCCEEEEEcCCCE
Confidence 556789999 999765544 56788 9999986 4442 122222 22 56789999999998888778889
Q ss_pred EEEEEcccccc
Q 015198 285 VHIFSLRVRVV 295 (411)
Q Consensus 285 I~vwd~~~~~~ 295 (411)
|.+||.++++.
T Consensus 249 i~~~d~~~g~~ 259 (314)
T 1pjx_A 249 IEVFGPDGGQP 259 (314)
T ss_dssp EEEECTTCBSC
T ss_pred EEEEcCCCCcE
Confidence 99999876653
No 201
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.42 E-value=2.8e-10 Score=102.04 Aligned_cols=223 Identities=11% Similarity=0.041 Sum_probs=147.4
Q ss_pred CCCCCeEEEEEcCCCCEEE-EEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 42 VDEIELISVSWNQDYGCFA-AGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la-~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
.+..-..+..|++++..|+ +.. ++.|..|+.++... .... ....+..+.+++++.++++. + ..|.+|
T Consensus 10 ~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~---~~~~~~~i~~~~dG~l~v~~--~-----~~l~~~ 78 (297)
T 3g4e_A 10 ENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT---MDAPVSSVALRQSGGYVATI--G-----TKFCAL 78 (297)
T ss_dssp CCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE---CSSCEEEEEEBTTSSEEEEE--T-----TEEEEE
T ss_pred cCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe---CCCceEEEEECCCCCEEEEE--C-----CeEEEE
Confidence 3444567899999765554 544 89999999886443 2222 23356677888888766664 2 789999
Q ss_pred ECCCCcEEEEEee-----cCceeEEEEcCCeEEEEEc------------CeEEEEEcC-CceeeEEEeccCCCcceEEEc
Q 015198 120 DDHQSRCIGEFAF-----RSDVRSVKLSRDRIVVVLE------------HKIYVYSFV-DLKLLHQIETLANLRGLCCLS 181 (411)
Q Consensus 120 d~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~d------------g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 181 (411)
|..+++....... ...+..++++|+|.+.+.+ ....+|.+. .++...... ... ....+.
T Consensus 79 d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-~~~--~pngi~ 155 (297)
T 3g4e_A 79 NWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-QVD--ISNGLD 155 (297)
T ss_dssp ETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-EES--BEEEEE
T ss_pred ECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-ccc--cccceE
Confidence 9888765443332 2357889999999877721 223444443 233333222 212 234556
Q ss_pred cCCCceEEEEecCCCCeEEEEEcC---Ccc-----eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEE
Q 015198 182 HHSSTSVLACPGLQRGQVRIEHFG---LNM-----IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQ 253 (411)
Q Consensus 182 ~~~~~~~l~~~g~~dg~i~i~~~~---~~~-----~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~ 253 (411)
+++++..|+++.+.++.|.+++.+ +.. ...+..+......++++++|++.++....+. |.+||..+++.+.
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQ 234 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEE
Confidence 666776666666667888887653 221 1122233456789999999998887777888 9999998899998
Q ss_pred EEeCCCCCcceEEEEeC-CCCCEEEEEeC
Q 015198 254 EVRRGVDRAEIYSIALS-PNVQWLAVASD 281 (411)
Q Consensus 254 ~~~~~~~~~~v~~l~~s-pdg~~l~s~s~ 281 (411)
.+.. ....+++++|. ||++.|++++.
T Consensus 235 ~i~~--p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 235 TVKL--PVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEC--SSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEC--CCCCceEEEEeCCCCCEEEEEcC
Confidence 8886 44579999998 88887766554
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.42 E-value=4.2e-10 Score=100.86 Aligned_cols=198 Identities=11% Similarity=0.035 Sum_probs=131.0
Q ss_pred EEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEE
Q 015198 90 IVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQ 167 (411)
Q Consensus 90 ~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~ 167 (411)
.-...|++ ++.++++.... +.|..||..+++. ..+.....+.++++++++.+++ .++.|.+||..+++....
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPA-----KKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEEETTTTEEEEEETTT-----TEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEE
T ss_pred ccCCeEECCCCEEEEEECCC-----CEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEE
Confidence 34566776 45555555554 8999999887765 4566778899999999998777 788999999988765443
Q ss_pred EeccC--CCcceEEEccCCCceEEEEecC----------CCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEE-EE
Q 015198 168 IETLA--NLRGLCCLSHHSSTSVLACPGL----------QRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLA-TA 234 (411)
Q Consensus 168 ~~~~~--~~~~~~~~~~~~~~~~l~~~g~----------~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~-s~ 234 (411)
..... .......+..++++.+++.+.. ..+.|+..+..++ ...+..+....+.++|+|+++.|+ +.
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~-~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHH-VKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSC-EEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCC-EEEEeeccccccceEEcCCCCEEEEec
Confidence 33221 1123456667777776654321 1123333433333 333333445567899999998664 55
Q ss_pred cCCCeEEEEEEC--CCCceE--EEEeC-CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 235 STRGTLIRIFNT--VDGTRL--QEVRR-GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 235 s~dg~~I~vwd~--~~~~~~--~~~~~-~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
+.++. |.+||+ .++... ..+.. ......+..++++++|++.++....+.|.+||.++++.
T Consensus 168 ~~~~~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~ 232 (297)
T 3g4e_A 168 SLSYS-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR 232 (297)
T ss_dssp GGGTE-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE
T ss_pred CCCCc-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE
Confidence 56778 999987 456532 12221 11234678999999999888877788899999987764
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.40 E-value=1.8e-11 Score=124.18 Aligned_cols=243 Identities=11% Similarity=-0.011 Sum_probs=151.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe--CC----cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCC----
Q 015198 42 VDEIELISVSWNQDYGCFAAGT--SC----GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQY---- 111 (411)
Q Consensus 42 ~h~~~V~~l~~s~~g~~la~g~--dg----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~---- 111 (411)
+|...+..++|||||++||.+. +| .|++||+++++.. ...+ ....+..+.|+++ ..++.+..+...
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~-~~~~--~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL-ADEL--KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE-EEEE--EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC-CccC--CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 3445788999999999999876 33 5999999986542 2221 1222245778888 555444333110
Q ss_pred -----CCCeEEEEECCCCcE--EEEEee---cCceeEEEEcCCeEEEE---Ec-----CeEEEEEcCCc--eeeEEEecc
Q 015198 112 -----PPTKVIIWDDHQSRC--IGEFAF---RSDVRSVKLSRDRIVVV---LE-----HKIYVYSFVDL--KLLHQIETL 171 (411)
Q Consensus 112 -----~d~~i~vwd~~~~~~--~~~~~~---~~~i~~~~~~~~~~~~~---~d-----g~i~iwd~~~~--~~~~~~~~~ 171 (411)
....|++|++.+++. ...+.. ...+..+.|+|||++++ .+ ..|++||+.++ +....+..+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 024699999887752 233332 23588999999998776 33 38999999876 314455444
Q ss_pred CCCcceEEEccCCCceEEEEecCC---CCeEEEEEcCC--cceEE-EeccccceeEEEecCCCCEEEEEcCCCeEEEEEE
Q 015198 172 ANLRGLCCLSHHSSTSVLACPGLQ---RGQVRIEHFGL--NMIKL-INAHDSHIACFTLTLDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 172 ~~~~~~~~~~~~~~~~~l~~~g~~---dg~i~i~~~~~--~~~~~-~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd 245 (411)
..... ..+. +++..|++.... ++.|.+++... ..... +..+...+..++++ ++.++++...++. .+||.
T Consensus 316 ~~~~~-~~~~--~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~ 390 (741)
T 1yr2_A 316 LKAQW-DFVD--GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLA 390 (741)
T ss_dssp SSSCE-EEEE--EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEE
T ss_pred CCceE-EEEe--ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEE
Confidence 43222 2233 344555554432 44577777665 23333 34445566677887 6667888888887 77765
Q ss_pred CC-CCceEEEEeCCCCCcceEEEEeCCCCCEEEEEe----CCCcEEEEEccccc
Q 015198 246 TV-DGTRLQEVRRGVDRAEIYSIALSPNVQWLAVAS----DKGTVHIFSLRVRV 294 (411)
Q Consensus 246 ~~-~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s----~dg~I~vwd~~~~~ 294 (411)
+. +++....+... +...+..+.++|+++.|+... ..++|++||+.+++
T Consensus 391 ~~~~g~~~~~l~~~-~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 391 FDLDGKPAGAVSLP-GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EETTSCEEEECBCS-SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EeCCCCceeeccCC-CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 43 46666665532 356789999999988665332 34689999998876
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.39 E-value=7.7e-11 Score=119.47 Aligned_cols=234 Identities=9% Similarity=-0.044 Sum_probs=145.9
Q ss_pred cCCCCEEEEEe-CC---cEEEEecCCC-----cceEEee---c-CCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 53 NQDYGCFAAGT-SC---GFRIYNCEPF-----KETFRRD---L-KSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 53 s~~g~~la~g~-dg---~i~iw~~~~~-----~~~~~~~---~-~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
.|+|++++... ++ .-.||..+.. ....... + ..+...+..+.|+||+..++.+..+.......|++|
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 48999988766 33 3567765432 2111111 1 123346778899999877665433200011479999
Q ss_pred ECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcC--------------eEEEEEcCCcee--eEEEeccCCCcceEEE
Q 015198 120 DDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEH--------------KIYVYSFVDLKL--LHQIETLANLRGLCCL 180 (411)
Q Consensus 120 d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg--------------~i~iwd~~~~~~--~~~~~~~~~~~~~~~~ 180 (411)
|+.+++.+........+..++|+|| +.++ .++ .|++|++.+++. ...+.....+.....+
T Consensus 195 dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~ 273 (741)
T 1yr2_A 195 GVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGA 273 (741)
T ss_dssp ETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred ECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEE
Confidence 9999988665333333467899999 6665 222 499999977653 2233333333345677
Q ss_pred ccCCCceEEEEecCC----CCeEEEEEcCCc--c-eEEEeccccceeEEEecCCCCEEEEEcC----CCeEEEEEECCCC
Q 015198 181 SHHSSTSVLACPGLQ----RGQVRIEHFGLN--M-IKLINAHDSHIACFTLTLDGLLLATAST----RGTLIRIFNTVDG 249 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~----dg~i~i~~~~~~--~-~~~~~~~~~~i~~l~~sp~g~~l~s~s~----dg~~I~vwd~~~~ 249 (411)
.+++++++|++.... ...|++++.... . ...+..+...+.... +|+|+.|+..+. ++. |.+||+.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~-l~~~d~~~~ 351 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKK-IVRVDLSGS 351 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCE-EEEEECSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCE-EEEEeCCCC
Confidence 778888887765532 347888776554 4 566666665555553 488988877664 456 999999875
Q ss_pred -ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 250 -TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 250 -~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
.....+..+ +...+..+.|+ ++.++++...|+..+||.++
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 233444432 44567788887 66778888889988887765
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.37 E-value=9.7e-11 Score=107.44 Aligned_cols=234 Identities=10% Similarity=-0.026 Sum_probs=151.3
Q ss_pred EEEEcCCCCEEEEEe-----------CCcEEEEecCCCcceEEeecCCC-----CEEEEEEeccCCeEEEEecC--CCCC
Q 015198 49 SVSWNQDYGCFAAGT-----------SCGFRIYNCEPFKETFRRDLKSG-----GFRIVEMLFRCNILALVGAG--DNSQ 110 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-----------dg~i~iw~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~s~~--~d~~ 110 (411)
.++++|||++|+++. ++.|.+||..+.+......+..+ ......+.+++++..+..+. .+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~-- 159 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA-- 159 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS--
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC--
Confidence 499999999887764 56799999998776555544221 11334567888876554433 24
Q ss_pred CCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCe--EEEE--EcCeEEEEEcCC-ceeeEEEeccCC----Ccce-EEE
Q 015198 111 YPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDR--IVVV--LEHKIYVYSFVD-LKLLHQIETLAN----LRGL-CCL 180 (411)
Q Consensus 111 ~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~--~dg~i~iwd~~~-~~~~~~~~~~~~----~~~~-~~~ 180 (411)
+.|.++|+.+++.+.++...+. ..+.|.+ .++. .||.+.+.++.+ ++.......... ++.. ..+
T Consensus 160 ---~~VsVID~~t~~vv~tI~v~g~---~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 160 ---PAVGVVDLEGKAFKRMLDVPDC---YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp ---CEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred ---CeEEEEECCCCcEEEEEECCCc---ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence 8999999999999999875442 1122332 2222 688888888865 554322211111 1100 122
Q ss_pred ccCCCceEEEEecCCCCeEEEEEcCCcceE---EEe----------ccccceeEEEecCCCCEEEEEcC----------C
Q 015198 181 SHHSSTSVLACPGLQRGQVRIEHFGLNMIK---LIN----------AHDSHIACFTLTLDGLLLATAST----------R 237 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~---~~~----------~~~~~i~~l~~sp~g~~l~s~s~----------d 237 (411)
. .+++.+++.+ .+|.|++.+..+.... .+. ........++++++++.|+.... .
T Consensus 234 ~-~~dG~~~~vs--~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 234 S-QKAGRLVWPT--YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp E-TTTTEEEEEB--TTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred E-cCCCcEEEEe--CCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 2 2455555443 4789998766544322 221 01223445788999998877643 1
Q ss_pred CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC-EEEEE-eCCCcEEEEEccccccCC
Q 015198 238 GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ-WLAVA-SDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 238 g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~s~-s~dg~I~vwd~~~~~~~~ 297 (411)
+. |.++|+.+++.+..+..+ ..+++|++++|++ +|+++ ..++.|.|+|..+++...
T Consensus 311 ~~-V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 311 RF-VVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EE-EEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CE-EEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 45 999999999999998853 3788999999997 66665 458999999999998654
No 206
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=8.7e-11 Score=103.47 Aligned_cols=193 Identities=8% Similarity=-0.010 Sum_probs=125.9
Q ss_pred EEEEEeccCCeEEEE-ecCCCCCCCCCeEEEEECCCCcEEEEEe--ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCce
Q 015198 89 RIVEMLFRCNILALV-GAGDNSQYPPTKVIIWDDHQSRCIGEFA--FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLK 163 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~-s~~~d~~~~d~~i~vwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~ 163 (411)
....+.+++++.+++ +...+ +.|.+||..++... .+. ....+.++++++++.+++ .++.|++||.....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~-----~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY-----GRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS-----CEEEEECC-----E-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSC
T ss_pred CccceEECCCCCEEEEccCCC-----CcEEEecCCCcccc-eEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCce
Confidence 456677888877777 54555 89999996554432 222 335678899999987666 36899999986543
Q ss_pred eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEE-eccccceeEEEecCCCCEEEEEcCCCeEEE
Q 015198 164 LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLI-NAHDSHIACFTLTLDGLLLATASTRGTLIR 242 (411)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~ 242 (411)
. ..+.... ......+..++++.++++ ...++.|.+++......... ......+..++++++|+++++...++. |.
T Consensus 99 ~-~~~~~~~-~~~p~~i~~~~~g~l~v~-~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~ 174 (270)
T 1rwi_B 99 Q-TVLPFDG-LNYPEGLAVDTQGAVYVA-DRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VV 174 (270)
T ss_dssp C-EECCCCS-CSSEEEEEECTTCCEEEE-EGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EE
T ss_pred E-eeeecCC-cCCCcceEECCCCCEEEE-ECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EE
Confidence 3 2232111 123456666667665554 34577888875443322221 223346788999999998777777788 99
Q ss_pred EEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 243 IFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 243 vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
+||............ ....+..++++++|.++++...++.|.+|+....
T Consensus 175 ~~~~~~~~~~~~~~~--~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 175 KLEAESNNQVVLPFT--DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp EECTTTCCEEECCCS--SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred EEecCCCceEeeccc--CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 999876654432222 2256899999999987777777889999998654
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.33 E-value=3.5e-09 Score=96.24 Aligned_cols=218 Identities=8% Similarity=0.033 Sum_probs=144.2
Q ss_pred CCeEEEEEcCCCCEE-EEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 45 IELISVSWNQDYGCF-AAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 45 ~~V~~l~~s~~g~~l-a~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
.......|+|++..+ +++. ++.|..|+.++... ....+ ...+..+.+.+++.++++.. ..|.+||..
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~---~~~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRK-TVHAL---PFMGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEEEC---SSCEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEC---CCcceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 345788999985554 4555 88999999876432 22222 23567777888888777652 459999988
Q ss_pred CCcEEEEEee-----cCceeEEEEcCCeEEEE-E-c-------CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceE
Q 015198 123 QSRCIGEFAF-----RSDVRSVKLSRDRIVVV-L-E-------HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSV 188 (411)
Q Consensus 123 ~~~~~~~~~~-----~~~i~~~~~~~~~~~~~-~-d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (411)
+++....... ...+.++.++++|.+.+ . + +.|+.++ +++...... ... ....+.+++++..
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~--~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DIS--IPNSICFSPDGTT 192 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EES--SEEEEEECTTSCE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCc--ccCCeEEcCCCCE
Confidence 8876443332 13588999999998777 2 1 4566666 455433222 211 2335566667766
Q ss_pred EEEecCCCCeEEEEEcC---C-cc--eEEE---eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC
Q 015198 189 LACPGLQRGQVRIEHFG---L-NM--IKLI---NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV 259 (411)
Q Consensus 189 l~~~g~~dg~i~i~~~~---~-~~--~~~~---~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~ 259 (411)
++++...++.|.+++.. + .. ...+ .........++++++|.+.++...++. |.+||. +++.+..+..
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~-- 268 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEV-- 268 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEEC--
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEEC--
Confidence 66655567889887754 3 21 1122 223455678999999998777766788 999997 6787777775
Q ss_pred CCcceEEEEeC-CCCCEEEEEeCC
Q 015198 260 DRAEIYSIALS-PNVQWLAVASDK 282 (411)
Q Consensus 260 ~~~~v~~l~~s-pdg~~l~s~s~d 282 (411)
....+.+++|+ ++++.|++++..
T Consensus 269 ~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 269 PGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp SCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCCcEEEEEecCCCCEEEEEecC
Confidence 44579999998 888877655543
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.32 E-value=3.6e-09 Score=94.34 Aligned_cols=233 Identities=9% Similarity=-0.061 Sum_probs=154.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC
Q 015198 43 DEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
+...+.++++.++|.++++.. ++.|..|+.+ .+. ....+......+..+.+.+++.++++...+ +.|..+|.
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~ 132 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTA 132 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTT-----TEEEEECT
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCC-----CeEEEECC
Confidence 346789999999998877766 7889999877 332 333332234556778888887777776544 89999997
Q ss_pred CCCcEEEE-Ee-ecCceeEEEEcCCeEEEE-E--cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 122 HQSRCIGE-FA-FRSDVRSVKLSRDRIVVV-L--EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 122 ~~~~~~~~-~~-~~~~i~~~~~~~~~~~~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
. ++.... +. ....+..+++.+++.+.+ . ++.|..+|. +++... +...........+..++++.+.++ ....
T Consensus 133 ~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~-~~~~ 208 (300)
T 2qc5_A 133 D-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFV-EIMG 208 (300)
T ss_dssp T-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEE-ETTT
T ss_pred C-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEE-ccCC
Confidence 6 655422 12 345788999999887666 2 678999998 555443 332222224556666767766554 3346
Q ss_pred CeEEEEEcCCcceEE-EeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCE
Q 015198 197 GQVRIEHFGLNMIKL-INAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQW 275 (411)
Q Consensus 197 g~i~i~~~~~~~~~~-~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 275 (411)
+.|.+++..+..... +..+...+.+++++++|+++++...++. |..||. +++.. .+........+.+++++++|++
T Consensus 209 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l 285 (300)
T 2qc5_A 209 NKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSV 285 (300)
T ss_dssp TEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCE
T ss_pred CEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCCCCE
Confidence 678887765443332 2234566889999999997777766788 999997 55543 3432213456889999999986
Q ss_pred EEEEeCCCcEEEEEcc
Q 015198 276 LAVASDKGTVHIFSLR 291 (411)
Q Consensus 276 l~s~s~dg~I~vwd~~ 291 (411)
+++.. . .|..+|.+
T Consensus 286 ~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 286 WFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEECS-S-EEEEEEEC
T ss_pred EEEcc-C-ceEEeCCC
Confidence 65544 4 67776653
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.32 E-value=3.9e-09 Score=95.87 Aligned_cols=190 Identities=9% Similarity=-0.103 Sum_probs=122.1
Q ss_pred EEeccCC-eEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEe
Q 015198 92 EMLFRCN-ILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIE 169 (411)
Q Consensus 92 ~~~~~~~-~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~ 169 (411)
...|+++ +.++++...+ +.|..||..+++. ..+.....+.++.+++++.+++ .+..|++||..+++......
T Consensus 53 gp~~~~~~~~l~~~d~~~-----~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 53 GPTFDPASGTAWWFNILE-----RELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEETTTTEEEEEEGGG-----TEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEEC
T ss_pred CCeEeCCCCEEEEEECCC-----CEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEee
Confidence 3456664 4455554444 8999999877654 3455667899999999998777 66679999998877543322
Q ss_pred ccC--CCcceEEEccCCCceEEEEecC-----CCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEE-cCCCeEE
Q 015198 170 TLA--NLRGLCCLSHHSSTSVLACPGL-----QRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATA-STRGTLI 241 (411)
Q Consensus 170 ~~~--~~~~~~~~~~~~~~~~l~~~g~-----~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~-s~dg~~I 241 (411)
... .......+..++++.+++.+.. ..+.|..++ .+ .+..+..+......++|+|+|+.|+.+ +.++. |
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~-I 203 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNR-L 203 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCE-E
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE-E
Confidence 111 1123556677777776654321 123455544 43 333333344456789999999876554 45677 9
Q ss_pred EEEECC--CC-ce--EEEEe-CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEc
Q 015198 242 RIFNTV--DG-TR--LQEVR-RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 242 ~vwd~~--~~-~~--~~~~~-~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~ 290 (411)
.+||+. ++ +. ...+. .......+..++++++|.++++...++.|.+|+.
T Consensus 204 ~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 204 MRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 999986 55 32 11221 1113346788999999998777767788999987
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.31 E-value=7e-11 Score=118.77 Aligned_cols=242 Identities=10% Similarity=0.040 Sum_probs=150.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEe--C----CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCC----
Q 015198 41 DVDEIELISVSWNQDYGCFAAGT--S----CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQ---- 110 (411)
Q Consensus 41 ~~h~~~V~~l~~s~~g~~la~g~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~---- 110 (411)
.+|...+..++|||||++||.+. . ..|++||+++++.. ...+ .......+.|+ |+..|+.+..+..
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~-~~~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL-ETPL--KDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE-EEEE--EEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC-cccc--CCceeccEEEe-CCCEEEEEEecCccccc
Confidence 45667899999999999999654 2 46899999986532 2222 11112344566 5443333322210
Q ss_pred ----CCCCeEEEEECCCCcE--EEEEee----cCceeEEEEcCCeEEEE---E----cCeEEEEEcCCce-eeEEEeccC
Q 015198 111 ----YPPTKVIIWDDHQSRC--IGEFAF----RSDVRSVKLSRDRIVVV---L----EHKIYVYSFVDLK-LLHQIETLA 172 (411)
Q Consensus 111 ----~~d~~i~vwd~~~~~~--~~~~~~----~~~i~~~~~~~~~~~~~---~----dg~i~iwd~~~~~-~~~~~~~~~ 172 (411)
.....|++|++.++.. ...+.. ...+..+.++||+++++ . .+.|+++|+.+++ ....+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 1235699999887653 333332 23467899999999886 1 2589999997763 344554444
Q ss_pred CCcceEEEccCCCceEEEEecCCC---CeEEEEEcCCcc---eEEEeccccceeEEEecCCCCEEEEEcCCC---eEEEE
Q 015198 173 NLRGLCCLSHHSSTSVLACPGLQR---GQVRIEHFGLNM---IKLINAHDSHIACFTLTLDGLLLATASTRG---TLIRI 243 (411)
Q Consensus 173 ~~~~~~~~~~~~~~~~l~~~g~~d---g~i~i~~~~~~~---~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg---~~I~v 243 (411)
..... .+.+++ ..|++....+ +.|..++..... ...+..|...+. .|+++++.|+....++ . |++
T Consensus 281 ~~~~~-~~~~~g--~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~-l~~ 354 (693)
T 3iuj_A 281 DADVS-LVDNKG--STLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATAR-VEQ 354 (693)
T ss_dssp SSCEE-EEEEET--TEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEE-EEE
T ss_pred CceEE-EEeccC--CEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeE-EEE
Confidence 32222 244433 3333333333 567777765533 356666766654 8899999887665544 5 899
Q ss_pred EECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC----CcEEEEEccccc
Q 015198 244 FNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK----GTVHIFSLRVRV 294 (411)
Q Consensus 244 wd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d----g~I~vwd~~~~~ 294 (411)
||+. +.....+... ..+.+..+.+++++..|+....+ ++|+.||+.+++
T Consensus 355 ~d~~-g~~~~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 355 FDYE-GKRVREVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ECTT-SCEEEEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EECC-CCeeEEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 9986 4444555432 34567788888888877655544 789999998775
No 211
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.31 E-value=2.6e-09 Score=98.71 Aligned_cols=226 Identities=13% Similarity=0.080 Sum_probs=146.5
Q ss_pred CCCCEEEEEe--CCcEEEEecCCC--cceEEeecC-------CCCEEEEEEeccCCeEEEEecCCC-CCCCCCeEEEEEC
Q 015198 54 QDYGCFAAGT--SCGFRIYNCEPF--KETFRRDLK-------SGGFRIVEMLFRCNILALVGAGDN-SQYPPTKVIIWDD 121 (411)
Q Consensus 54 ~~g~~la~g~--dg~i~iw~~~~~--~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~s~~~d-~~~~d~~i~vwd~ 121 (411)
+++++|++.+ ++.|.|+|+.+. +..+...+. .+......+...|++ +++++..+ .....+.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 8899998877 899999998743 222322221 122344556667888 44433221 1112378999999
Q ss_pred CCCcEEEEEeec----CceeEEEEcCCeEEEE-E---------------------cCeEEEEEcCCceeeEEEeccCCCc
Q 015198 122 HQSRCIGEFAFR----SDVRSVKLSRDRIVVV-L---------------------EHKIYVYSFVDLKLLHQIETLANLR 175 (411)
Q Consensus 122 ~~~~~~~~~~~~----~~i~~~~~~~~~~~~~-~---------------------dg~i~iwd~~~~~~~~~~~~~~~~~ 175 (411)
++++.+..+... .--..+.|+|+++.++ . +.+|.+||+.+++.+.++.......
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999999988722 2234578899988776 3 5899999999998888887642211
Q ss_pred c--eEEEccCCCceEEEEecC-----CCCeEEEEEcCCcc---eEEE--ecc----------------ccceeEEEecCC
Q 015198 176 G--LCCLSHHSSTSVLACPGL-----QRGQVRIEHFGLNM---IKLI--NAH----------------DSHIACFTLTLD 227 (411)
Q Consensus 176 ~--~~~~~~~~~~~~l~~~g~-----~dg~i~i~~~~~~~---~~~~--~~~----------------~~~i~~l~~sp~ 227 (411)
. -+.+.+++++.++.+++. .+++|.+|..+... .+.+ ... ......|.+++|
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2 234566888887766554 56678764433221 1111 110 134678999999
Q ss_pred CCEEEEEcCCCeEEEEEECCC---CceEEEEeCCCC------------CcceEEEEeCCCCCEEEEEe
Q 015198 228 GLLLATASTRGTLIRIFNTVD---GTRLQEVRRGVD------------RAEIYSIALSPNVQWLAVAS 280 (411)
Q Consensus 228 g~~l~s~s~dg~~I~vwd~~~---~~~~~~~~~~~~------------~~~v~~l~~spdg~~l~s~s 280 (411)
|++|.++......|.+||+.. .+.+..+..+.. .+....++++|||++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999888776433399999853 355555554211 01357899999999999988
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.30 E-value=1e-08 Score=94.77 Aligned_cols=233 Identities=6% Similarity=-0.115 Sum_probs=141.1
Q ss_pred EcCCCCEEEEEe---CC---cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCC-C----CCCCCeEEEEE
Q 015198 52 WNQDYGCFAAGT---SC---GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDN-S----QYPPTKVIIWD 120 (411)
Q Consensus 52 ~s~~g~~la~g~---dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-~----~~~d~~i~vwd 120 (411)
..|+++++.+.. .+ .|.+||..+.+.+.. +..+.. . .+.++|++..+..+... . ...++.|.+||
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~--i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH--VNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEE--ecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 346777666544 11 789999988665433 323333 2 78889988665554310 0 00127899999
Q ss_pred CCCCcEEEEEeec--------CceeEEEEcCCeEEEE----E-cCeEEEEEcCCceeeEE-EeccCCCcceEEEccCCCc
Q 015198 121 DHQSRCIGEFAFR--------SDVRSVKLSRDRIVVV----L-EHKIYVYSFVDLKLLHQ-IETLANLRGLCCLSHHSST 186 (411)
Q Consensus 121 ~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~----~-dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 186 (411)
..+.+.+..+... .....+.++||++++. . ++.|.++| .+++.+.. +.... +..+.+.+..
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~----~~~~~~~~~~ 178 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT----CYHIHPGAPS 178 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----eEEEEeCCCc
Confidence 9999888877632 2355899999998877 2 47899999 99988877 64332 2334444444
Q ss_pred eEEEEecCCCCeEEEEEcCCcceEEEe-----ccccce-eEEEecCCCCEEEEEcCCCeEEEEEECCCCc--eEEEEeCC
Q 015198 187 SVLACPGLQRGQVRIEHFGLNMIKLIN-----AHDSHI-ACFTLTLDGLLLATASTRGTLIRIFNTVDGT--RLQEVRRG 258 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~~~~~~~~~-----~~~~~i-~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~--~~~~~~~~ 258 (411)
.+++ .+.||.+.+++..++...... ....++ ....+.+++..++..+..+. +.+.|+..+. .+..+...
T Consensus 179 ~~~~--~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~~~ 255 (373)
T 2mad_H 179 TFYL--LCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPIDAL 255 (373)
T ss_pred eEEE--EcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeeeeec
Confidence 4443 335777777555444432221 111221 23456666655554456778 9999987653 22222210
Q ss_pred --------CCCcceEEEEeCCCCCEEEEEeC----------CCcEEEEEccccccC
Q 015198 259 --------VDRAEIYSIALSPNVQWLAVASD----------KGTVHIFSLRVRVVG 296 (411)
Q Consensus 259 --------~~~~~v~~l~~spdg~~l~s~s~----------dg~I~vwd~~~~~~~ 296 (411)
........+.++||++.|+++.. .+.|.++|+.+++..
T Consensus 256 ~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv 311 (373)
T 2mad_H 256 SGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS 311 (373)
T ss_pred CCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEE
Confidence 01123445789999998877653 357999999887753
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.30 E-value=2.8e-10 Score=106.22 Aligned_cols=229 Identities=12% Similarity=0.015 Sum_probs=150.3
Q ss_pred CCCCEEEEEe--C----CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecC----------CCCCCCCCeEE
Q 015198 54 QDYGCFAAGT--S----CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAG----------DNSQYPPTKVI 117 (411)
Q Consensus 54 ~~g~~la~g~--d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~d~~~~d~~i~ 117 (411)
++++.+++.. + +.|.++|..+.+.+..... +... .+.+++++..+..+. .+ +.|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v--G~~P--gia~SpDgk~lyVan~~~~~~~~G~~~-----~~Vs 152 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG--GFLP--HPVAAEDGSFFAQASTVFERIARGKRT-----DYVE 152 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE--CSSC--EEEECTTSSCEEEEEEEEEETTEEEEE-----EEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC--CCCC--ceEECCCCCEEEEEeccccccccCCCC-----CEEE
Confidence 5777777766 3 6999999998776666554 2222 677888875444332 23 7899
Q ss_pred EEECCCCcEEEEEeec--------CceeEEEEcCCeEEEE--E---cCeEEEEEcCCceeeEEEeccCC-------Ccce
Q 015198 118 IWDDHQSRCIGEFAFR--------SDVRSVKLSRDRIVVV--L---EHKIYVYSFVDLKLLHQIETLAN-------LRGL 177 (411)
Q Consensus 118 vwd~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~--~---dg~i~iwd~~~~~~~~~~~~~~~-------~~~~ 177 (411)
++|..+++.+..+... .....+.++||++++. . ++.|.+.|+.+++.+..+..... ....
T Consensus 153 viD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~ 232 (426)
T 3c75_H 153 VFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVF 232 (426)
T ss_dssp EECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEE
T ss_pred EEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEE
Confidence 9999999999988743 3456789999998776 2 57899999999998888764221 0001
Q ss_pred EEEccCCCceEEEEec------------------------------------CCCCeEEEEEcCCcceEEE---ec----
Q 015198 178 CCLSHHSSTSVLACPG------------------------------------LQRGQVRIEHFGLNMIKLI---NA---- 214 (411)
Q Consensus 178 ~~~~~~~~~~~l~~~g------------------------------------~~dg~i~i~~~~~~~~~~~---~~---- 214 (411)
+. .++++.++++.. ...+.|.+.+.....+..+ ..
T Consensus 233 v~--~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~ 310 (426)
T 3c75_H 233 YM--NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEA 310 (426)
T ss_dssp EE--EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTT
T ss_pred EE--EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccc
Confidence 11 112222222111 1233444433322111111 00
Q ss_pred ------cccceeEEEecCCCCEEEEEcC----------CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC-EEE
Q 015198 215 ------HDSHIACFTLTLDGLLLATAST----------RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ-WLA 277 (411)
Q Consensus 215 ------~~~~i~~l~~sp~g~~l~s~s~----------dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~l~ 277 (411)
.......++++|+++.+++... .+. |.++|+.+.+.+.++..+ .....+.|+|||+ +|+
T Consensus 311 ~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~-VsVID~~T~kvv~~I~vg---~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 311 ERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF-VVVLNAETGERINKIELG---HEIDSINVSQDAEPLLY 386 (426)
T ss_dssp TGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-EEEEETTTCCEEEEEEEE---EEECEEEECCSSSCEEE
T ss_pred ccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-EEEEECCCCeEEEEEECC---CCcCeEEEccCCCEEEE
Confidence 0111223789999887776542 346 999999999999998752 3588999999999 888
Q ss_pred EEe-CCCcEEEEEccccccCC
Q 015198 278 VAS-DKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 278 s~s-~dg~I~vwd~~~~~~~~ 297 (411)
+.. .++.|.|+|+.+++...
T Consensus 387 v~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 387 ALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp EEETTTTEEEEEETTTCCEEE
T ss_pred EEcCCCCeEEEEECCCCCEEE
Confidence 887 58999999999998764
No 214
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.27 E-value=3.7e-09 Score=95.05 Aligned_cols=231 Identities=9% Similarity=-0.006 Sum_probs=148.4
Q ss_pred ccccCCCCCCeEEEEEcCCCCE-EEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 37 TAFSDVDEIELISVSWNQDYGC-FAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 37 ~~~~~~h~~~V~~l~~s~~g~~-la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
...+...........|+|+|+. ++++. ++.|..|+... + ..... .....+..+.+++++.++++...+ +
T Consensus 37 ~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-~-~~~~~--~~~~~~~gl~~d~dG~l~v~~~~~-----~ 107 (305)
T 3dr2_A 37 LLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-T-VDVLL--DATAFTNGNAVDAQQRLVHCEHGR-----R 107 (305)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-C-EEEEE--ESCSCEEEEEECTTSCEEEEETTT-----T
T ss_pred eEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-C-EEEEe--CCCCccceeeECCCCCEEEEECCC-----C
Confidence 3445556667789999999994 45555 88999998743 2 22221 233446677888888877776554 7
Q ss_pred eEEEEECCCCcEEEEEee-----cCceeEEEEcCCeEEEEEc--------------------CeEEEEEcCCceeeEEEe
Q 015198 115 KVIIWDDHQSRCIGEFAF-----RSDVRSVKLSRDRIVVVLE--------------------HKIYVYSFVDLKLLHQIE 169 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~-----~~~i~~~~~~~~~~~~~~d--------------------g~i~iwd~~~~~~~~~~~ 169 (411)
.|.+|+.. ++....... ...+.++.++++|.+.+.| +.|+.||..+++.....
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 89999975 654332221 2356789999999888732 56888887666654333
Q ss_pred ccCCCcceEEEccCCCceEEEEecCC-----CCeEEEEEcCCcceE---EE-eccccceeEEEecCCCCEEEEEcCCCeE
Q 015198 170 TLANLRGLCCLSHHSSTSVLACPGLQ-----RGQVRIEHFGLNMIK---LI-NAHDSHIACFTLTLDGLLLATASTRGTL 240 (411)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~g~~-----dg~i~i~~~~~~~~~---~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~ 240 (411)
... ....+.+++++..|+++... .+.|.+++.....+. .+ .........++++++|++.+ +. .+.
T Consensus 186 -~~~--~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv-~~-~~g- 259 (305)
T 3dr2_A 186 -DLD--HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWS-SS-GTG- 259 (305)
T ss_dssp -EES--SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEE-CC-SSE-
T ss_pred -cCC--CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEE-ec-CCc-
Confidence 222 23345566666666554433 267877665432221 11 11234456789999999544 44 446
Q ss_pred EEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEE
Q 015198 241 IRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFS 289 (411)
Q Consensus 241 I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd 289 (411)
|.+||. +++.+..+... . .+.+++|+++++.|+.++.++ ++.++
T Consensus 260 v~~~~~-~g~~~~~~~~~--~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 260 VCVFDS-DGQLLGHIPTP--G-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp EEEECT-TSCEEEEEECS--S-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred EEEECC-CCCEEEEEECC--C-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 999997 68888777752 2 588999999999888888765 44444
No 215
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.20 E-value=7e-09 Score=103.77 Aligned_cols=237 Identities=11% Similarity=0.010 Sum_probs=146.3
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC---CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC---NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~ 131 (411)
+..+++++ |+.|..+|.++++.+.......+......+...| ++.++++.+....-.++.|..||..+|+.+..+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 45777788 9999999999988877765420110000111111 4555555432000023899999999999998876
Q ss_pred ec--C------------------------------ceeEEEEcCCeEEEE---EcC-------------------eEEEE
Q 015198 132 FR--S------------------------------DVRSVKLSRDRIVVV---LEH-------------------KIYVY 157 (411)
Q Consensus 132 ~~--~------------------------------~i~~~~~~~~~~~~~---~dg-------------------~i~iw 157 (411)
.. . ....+.++++..++. .++ .|..+
T Consensus 201 ~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~Al 280 (689)
T 1yiq_A 201 TVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAV 280 (689)
T ss_dssp SSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEE
T ss_pred ccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 012467777544444 333 49999
Q ss_pred EcCCceeeEEEeccCCC---------cceEEEccCCCceEEEEecCCCCeEEEEEc-CCcceEEEeccc-----------
Q 015198 158 SFVDLKLLHQIETLANL---------RGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAHD----------- 216 (411)
Q Consensus 158 d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~----------- 216 (411)
|.++|+.+..+...... .....+..++...-+++.++.+|.+++++. +++.+.......
T Consensus 281 D~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~ 360 (689)
T 1yiq_A 281 NADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKT 360 (689)
T ss_dssp ETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTT
T ss_pred EccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccC
Confidence 99999999888653221 111122222221123345778999999665 444442221100
Q ss_pred ----------------------------cceeEEEecCCCCEEEEEcC--------------------------------
Q 015198 217 ----------------------------SHIACFTLTLDGLLLATAST-------------------------------- 236 (411)
Q Consensus 217 ----------------------------~~i~~l~~sp~g~~l~s~s~-------------------------------- 236 (411)
..-..++|+|+..++++...
T Consensus 361 ~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p 440 (689)
T 1yiq_A 361 GRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMP 440 (689)
T ss_dssp TEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCC
T ss_pred CCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccC
Confidence 00113688888887776522
Q ss_pred -------------CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 237 -------------RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 237 -------------dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+|. |+.||+.+|+.+..+..+ .++..-.+...+.+++.++.||.|+.||.++|+..
T Consensus 441 ~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 441 EGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYV---TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp SSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCCCCCccee-EEEEECCCCCeEeEccCC---CCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 377 999999999998888752 22333355567789999999999999999999864
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=4.2e-09 Score=96.42 Aligned_cols=241 Identities=7% Similarity=-0.019 Sum_probs=150.0
Q ss_pred CCeEEEEEcCCCCEEEEEe---CCcEEEEecCCCcceEEe-----ecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 45 IELISVSWNQDYGCFAAGT---SCGFRIYNCEPFKETFRR-----DLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~---dg~i~iw~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
..+..++++++|+++++.. ++.++||.++. ...... ....+-..+..+.+++++.+++.........+..|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~-g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQ-DGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEET-TEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECC-CCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6789999999999988864 34367777653 222211 01123456788889988876665322000001789
Q ss_pred EEEECCCCcEEEEEeec-------CceeEEEEcCC-eEEEE--E----cCeEEEEEcCCceeeEEEeccCC---------
Q 015198 117 IIWDDHQSRCIGEFAFR-------SDVRSVKLSRD-RIVVV--L----EHKIYVYSFVDLKLLHQIETLAN--------- 173 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~-------~~i~~~~~~~~-~~~~~--~----dg~i~iwd~~~~~~~~~~~~~~~--------- 173 (411)
.+||+.+++.+..+... ..+..++++++ +.+.+ . ++.|.+||+.+++..+.+..+..
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 99999999988777632 34689999974 44444 2 46899999988876655432110
Q ss_pred ------------------CcceEEEccCCCceEEEEecCCCCeEEEEEcC----Cc-----ce--EEEeccccceeEEEe
Q 015198 174 ------------------LRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG----LN-----MI--KLINAHDSHIACFTL 224 (411)
Q Consensus 174 ------------------~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~----~~-----~~--~~~~~~~~~i~~l~~ 224 (411)
......+++++++..|+++......+...+.. .. .. ....++......+++
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 01234456666776666544333344443221 00 00 012234445678999
Q ss_pred cCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEE
Q 015198 225 TLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIF 288 (411)
Q Consensus 225 sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vw 288 (411)
+++|.++++...++. |.+||..+++........ ....+.+++|.++++++++.+..+.+.+|
T Consensus 256 d~~G~l~va~~~~~~-V~~~d~~~G~~~~~~~~~-~~~~p~~va~~~~g~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 256 DKDHNIYVGDLAHSA-IGVITSADRAYKLLVTDE-KLSWTDSFNFGSDGYLYFDCNQLHHSAPL 317 (343)
T ss_dssp CTTCCEEEEEGGGTE-EEEEETTTTEEEEEEECG-GGSCEEEEEECTTSCEEEEECCGGGSGGG
T ss_pred CCCCCEEEEccCCCe-EEEEECCCCCEEEEEECC-ceecCCeeEECCCCcEEEEeCcccccccc
Confidence 999999999888898 999998567643333321 23468999999999888777655544433
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.19 E-value=3.5e-09 Score=97.15 Aligned_cols=230 Identities=11% Similarity=0.027 Sum_probs=143.1
Q ss_pred EEEcCCCCEEEEEe------CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecC----------CCCCCCC
Q 015198 50 VSWNQDYGCFAAGT------SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAG----------DNSQYPP 113 (411)
Q Consensus 50 l~~s~~g~~la~g~------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~d~~~~d 113 (411)
....|+++.+++.. ++.|.++|..+.+.+..... +... .+.++|++..+..+. .+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v--G~~P--~va~spDG~~lyVan~~~~r~~~G~~~----- 108 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG--GFLP--NPVVADDGSFIAHASTVFSRIARGERT----- 108 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE--CSSC--EEEECTTSSCEEEEEEEEEETTEEEEE-----
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC--CCCC--cEEECCCCCEEEEEcccccccccCCCC-----
Confidence 45578998888876 35899999988766555543 2222 277888876544332 23
Q ss_pred CeEEEEECCCCcEEEEEeec--------CceeEEEEcCCeEEEE---E--cCeEEEEEcCCceeeEEEeccCCCcceEEE
Q 015198 114 TKVIIWDDHQSRCIGEFAFR--------SDVRSVKLSRDRIVVV---L--EHKIYVYSFVDLKLLHQIETLANLRGLCCL 180 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~---~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 180 (411)
+.|.+||..+++.+.++... .....+.++|||+++. . ++.|.++|+.+++.+.++.... +..+
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----~~~~ 184 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----CYHI 184 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEE
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----ccee
Confidence 78999999999999988742 2566799999998766 2 5789999999999999886532 1222
Q ss_pred ccCCCceEEEEecCCCCeEEEEEcC--CcceEEEecc----cccee-EEEec-CCCCEEEEEcCCCeEEEEEECCCCc--
Q 015198 181 SHHSSTSVLACPGLQRGQVRIEHFG--LNMIKLINAH----DSHIA-CFTLT-LDGLLLATASTRGTLIRIFNTVDGT-- 250 (411)
Q Consensus 181 ~~~~~~~~l~~~g~~dg~i~i~~~~--~~~~~~~~~~----~~~i~-~l~~s-p~g~~l~s~s~dg~~I~vwd~~~~~-- 250 (411)
.+.+...+++. +.||.+.+.+.. ++.......+ ..++. ...|. ++|++++ .+.+|. |++.|+.++.
T Consensus 185 ~P~g~~~~~~~--~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~ 260 (386)
T 3sjl_D 185 FPTAPDTFFMH--CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAK 260 (386)
T ss_dssp EEEETTEEEEE--ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCE
T ss_pred ecCCCceeEEE--CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcce
Confidence 23332233332 245665553332 2222111111 12221 23553 6786555 555788 9999987654
Q ss_pred eEEEEe--------CCCCCcceEEEEeCCCCCEEEEEeC----------CCcEEEEEccccccC
Q 015198 251 RLQEVR--------RGVDRAEIYSIALSPNVQWLAVASD----------KGTVHIFSLRVRVVG 296 (411)
Q Consensus 251 ~~~~~~--------~~~~~~~v~~l~~spdg~~l~s~s~----------dg~I~vwd~~~~~~~ 296 (411)
.+..+. .+........++++++++.|+.... .+.|.+.|+.+++..
T Consensus 261 v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~ 324 (386)
T 3sjl_D 261 FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERL 324 (386)
T ss_dssp ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEE
T ss_pred eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEE
Confidence 222232 1101223345778999998887653 246999999988754
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.18 E-value=2.7e-08 Score=93.24 Aligned_cols=194 Identities=9% Similarity=0.010 Sum_probs=124.8
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcC--eEEEEEcCCce
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEH--KIYVYSFVDLK 163 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg--~i~iwd~~~~~ 163 (411)
....+++++++.++++...+ +.|++||..+++............ ++|++++..++ .++ .|++++...+.
T Consensus 132 ~P~~la~d~~g~lyv~d~~~-----~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDD-----PRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CEEEEEECSTTEEEEEETTT-----TEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred CceEEEEeCCCCEEEEecCC-----CcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 45677788888888877665 899999988777665555433344 99999987555 223 89999986654
Q ss_pred eeEEEe---c-cCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEe-----ccccce--eEEEecCC-CCEE
Q 015198 164 LLHQIE---T-LANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLIN-----AHDSHI--ACFTLTLD-GLLL 231 (411)
Q Consensus 164 ~~~~~~---~-~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~-----~~~~~i--~~l~~sp~-g~~l 231 (411)
....+. . ... ....++.+++...|++ ...++.|+.++........+. ++...- ..++|+|+ +.++
T Consensus 206 ~~~~~g~~~~~~~~--~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 206 APTRIGQLGSTFSG--KIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp CEEEEEECCTTSCS--CCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred eeEEeeeccchhcC--CcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 433331 1 222 2233444552233434 345788888887765544441 122222 38999995 6666
Q ss_pred EEEcCCCeEEEEEECCCCceEEEEeCCC-------------CCcceEEEEeCCCCCEEEEEe-CCCcEEEEEccccc
Q 015198 232 ATASTRGTLIRIFNTVDGTRLQEVRRGV-------------DRAEIYSIALSPNVQWLAVAS-DKGTVHIFSLRVRV 294 (411)
Q Consensus 232 ~s~s~dg~~I~vwd~~~~~~~~~~~~~~-------------~~~~v~~l~~spdg~~l~s~s-~dg~I~vwd~~~~~ 294 (411)
++-..++. |+.|+.. ++ +..+.+.. .-.....++++++|+++++-. .++.|+.|++.++.
T Consensus 283 v~d~~~~~-I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 283 MSDQNLSS-VYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp EEETTTTE-EEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE
T ss_pred EEeCCCCE-EEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE
Confidence 66666777 9999964 44 33333311 013478999999999777777 78899999987665
No 219
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.16 E-value=9.3e-10 Score=101.31 Aligned_cols=167 Identities=10% Similarity=0.063 Sum_probs=121.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCc-----------ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFK-----------ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
+++.+++++...++++|+...+.+|+++... ...... ... +..+.| ++..++.+ .+ +
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~---lp~-V~~l~f--d~~~L~v~-~~-----~ 106 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKE---IPD-VIFVCF--HGDQVLVS-TR-----N 106 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEE---CTT-EEEEEE--ETTEEEEE-ES-----S
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEee---CCC-eeEEEE--CCCEEEEE-cC-----C
Confidence 6999999999999999995577889976433 112222 223 777888 54555555 55 9
Q ss_pred eEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEe
Q 015198 115 KVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACP 192 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 192 (411)
.|++||+.+........ +...+.++.+.+....++ .||.|.+||+.+++... + .. .+.+++|+++| +++
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~---~~--~Vs~v~WSpkG--~~v- 177 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L---AQ--NVTSFDVTNSQ--LAV- 177 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E---EE--SEEEEEECSSE--EEE-
T ss_pred cEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c---cC--CceEEEEcCCc--eEE-
Confidence 99999988776555554 677888888877654444 79999999998877653 2 12 56778888888 333
Q ss_pred cCCCCeEEEEEcCCcc---eEEE------e---ccccceeEEEecCCCCEEEE
Q 015198 193 GLQRGQVRIEHFGLNM---IKLI------N---AHDSHIACFTLTLDGLLLAT 233 (411)
Q Consensus 193 g~~dg~i~i~~~~~~~---~~~~------~---~~~~~i~~l~~sp~g~~l~s 233 (411)
|..||.+++|...+.. ...+ . +|...|.+|.|.+++.+|++
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 5579999998877766 4445 2 37788999999999998886
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.16 E-value=2.7e-09 Score=107.24 Aligned_cols=196 Identities=8% Similarity=0.081 Sum_probs=126.0
Q ss_pred CCEEEEEEeccCCeEEEE-----ecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---Ec------
Q 015198 86 GGFRIVEMLFRCNILALV-----GAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LE------ 151 (411)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~-----s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~d------ 151 (411)
+...+..+.|+|++..++ +|++. ..|++||+.+++.+...........++|+ |++.++ .+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~-----~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDW-----REIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCE-----EEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCce-----EEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccc
Confidence 445677788999998776 34433 78999999999976542222224577899 887666 33
Q ss_pred -------CeEEEEEcCCcee--eEEEeccC-CCcceEEEccCCCceEEEEecC---CCCeEEEEEcCCc--ceEEEeccc
Q 015198 152 -------HKIYVYSFVDLKL--LHQIETLA-NLRGLCCLSHHSSTSVLACPGL---QRGQVRIEHFGLN--MIKLINAHD 216 (411)
Q Consensus 152 -------g~i~iwd~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~---~dg~i~i~~~~~~--~~~~~~~~~ 216 (411)
..|++|++.++.. ...+.... .+.....+.+++++++|+++.. ....|++++.... ....+..+.
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~ 280 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL 280 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC
Confidence 2499999977543 22333222 2334566777888887765432 2357888776543 566677676
Q ss_pred cceeEEEecCCCCEEE-EEcCC---CeEEEEEECCCCce--EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCC---cEEE
Q 015198 217 SHIACFTLTLDGLLLA-TASTR---GTLIRIFNTVDGTR--LQEVRRGVDRAEIYSIALSPNVQWLAVASDKG---TVHI 287 (411)
Q Consensus 217 ~~i~~l~~sp~g~~l~-s~s~d---g~~I~vwd~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg---~I~v 287 (411)
...... ++++|..|+ ....+ +. |.++|+.++.. ...+.. +...+. .|++++++|+....++ .|++
T Consensus 281 ~~~~~~-~~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~--~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 281 DADVSL-VDNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIP--ERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SSCEEE-EEEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEEC--CCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred CceEEE-EeccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEec--CCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 666555 566666554 44433 56 99999988754 345555 333444 8899999887666544 6889
Q ss_pred EEcccc
Q 015198 288 FSLRVR 293 (411)
Q Consensus 288 wd~~~~ 293 (411)
|+++.+
T Consensus 355 ~d~~g~ 360 (693)
T 3iuj_A 355 FDYEGK 360 (693)
T ss_dssp ECTTSC
T ss_pred EECCCC
Confidence 988744
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=1.2e-08 Score=101.96 Aligned_cols=236 Identities=9% Similarity=-0.010 Sum_probs=148.9
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecC-CCC--EEEE-EEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEE
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLK-SGG--FRIV-EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEF 130 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~-~~~--~~~~-~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~ 130 (411)
+..|++++ |+.+..+|..+++.+...... ... ..+. .... .++.++++......-.++.|+.+|..+|+.+..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 55777777 999999999998888777652 100 0111 0111 1344555443200001389999999999999888
Q ss_pred eecCc---------------------------------eeEEEEcCCeEEEE---EcC-------------------eEE
Q 015198 131 AFRSD---------------------------------VRSVKLSRDRIVVV---LEH-------------------KIY 155 (411)
Q Consensus 131 ~~~~~---------------------------------i~~~~~~~~~~~~~---~dg-------------------~i~ 155 (411)
..... ...+.+++++..+. .++ .|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~ 286 (677)
T 1kb0_A 207 FSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIV 286 (677)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred ccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEE
Confidence 73111 12467777654444 222 599
Q ss_pred EEEcCCceeeEEEeccCCC---------cceEEEccCCCceEEEEecCCCCeEEEEEc-CCcceEEEeccc---------
Q 015198 156 VYSFVDLKLLHQIETLANL---------RGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAHD--------- 216 (411)
Q Consensus 156 iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~--------- 216 (411)
.+|.++|+.+..+....+. ........+++..-+++.++.+|.+++++. +++.+..+....
T Consensus 287 AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~ 366 (677)
T 1kb0_A 287 ALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDK 366 (677)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECT
T ss_pred EEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCC
Confidence 9999999999888653221 111222222211123345778999999665 455554443211
Q ss_pred --cce------------------------eEEEecCCCCEEEEEcC----------------------------------
Q 015198 217 --SHI------------------------ACFTLTLDGLLLATAST---------------------------------- 236 (411)
Q Consensus 217 --~~i------------------------~~l~~sp~g~~l~s~s~---------------------------------- 236 (411)
.++ ..++|+|++.++++...
T Consensus 367 ~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 446 (677)
T 1kb0_A 367 HGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFF 446 (677)
T ss_dssp TSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEE
T ss_pred CCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccccccccc
Confidence 011 15688998888877543
Q ss_pred ---------CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 237 ---------RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 237 ---------dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
.+. |..||+.+++.+..+.. ..++....+..++.+++.++.||.+++||..+++..
T Consensus 447 ~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~---~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~l 511 (677)
T 1kb0_A 447 NAEPPKSKPFGR-LLAWDPVAQKAAWSVEH---VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKL 511 (677)
T ss_dssp CSSCCCSCCEEE-EEEEETTTTEEEEEEEE---SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccccCCCCCccE-EEEEeCCCCcEEeecCC---CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCcee
Confidence 167 99999999999888764 234445556677888899999999999999999865
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.13 E-value=3.4e-08 Score=91.46 Aligned_cols=221 Identities=10% Similarity=0.033 Sum_probs=133.1
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS 134 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~ 134 (411)
+..+++++ ++.|..+|.++++......+....... .... ++.+++.. .+ +.|..+|..+|+.+..+....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~--p~~~-~~~v~v~~-~~-----g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSR--PVVS-DGLVLIHT-SN-----GQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSC--CEEE-TTEEEEEC-TT-----SEEEEEETTTCCEEEEEECCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcC--CEEE-CCEEEEEc-CC-----CeEEEEECCCCcEEEEEeCCC
Confidence 44666677 899999999988877766553221111 1111 34444443 33 899999999999998887443
Q ss_pred ce------eEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcc-----e--EEEccC-CCceEEEEecCCCCe
Q 015198 135 DV------RSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRG-----L--CCLSHH-SSTSVLACPGLQRGQ 198 (411)
Q Consensus 135 ~i------~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~-----~--~~~~~~-~~~~~l~~~g~~dg~ 198 (411)
.+ ...... ++.+++ .++.|..+|..+++.+........... . ....+. .++ .+++ ++.++.
T Consensus 174 ~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~-~~~~g~ 250 (376)
T 3q7m_A 174 PSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFA-LAYNGN 250 (376)
T ss_dssp -----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT-EEEE-ECTTSC
T ss_pred CceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC-EEEE-EecCcE
Confidence 33 222333 344444 588999999999998877754321000 0 000000 122 3333 446777
Q ss_pred EEEEEc-CCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEE
Q 015198 199 VRIEHF-GLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 199 i~i~~~-~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~ 277 (411)
+..++. +++.+.... ......+.. ++..|+.++.++. |..+|..+|+.+...... ....+..... .+..|+
T Consensus 251 l~~~d~~tG~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~-~~~~~~~~~~--~~~~l~ 322 (376)
T 3q7m_A 251 LTALDLRSGQIMWKRE--LGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDL-LHRLLTSPVL--YNGNLV 322 (376)
T ss_dssp EEEEETTTCCEEEEEC--CCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTT-TTSCCCCCEE--ETTEEE
T ss_pred EEEEECCCCcEEeecc--CCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeeccc-CCCcccCCEE--ECCEEE
Confidence 777655 455444333 222334443 4567777888899 999999999988776521 1112222222 246788
Q ss_pred EEeCCCcEEEEEccccccC
Q 015198 278 VASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 278 s~s~dg~I~vwd~~~~~~~ 296 (411)
.++.+|.|+++|..+++..
T Consensus 323 v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 323 VGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp EECTTSEEEEEETTTCCEE
T ss_pred EEeCCCeEEEEECCCCcEE
Confidence 8999999999999998743
No 223
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.13 E-value=8.5e-10 Score=101.56 Aligned_cols=170 Identities=15% Similarity=0.129 Sum_probs=117.6
Q ss_pred EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc-----------EEEEEeecCceeEEEEcCCeEEEE--EcCeEEE
Q 015198 90 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR-----------CIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYV 156 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~i 156 (411)
+..++.++...++++++. ..+++|++...+ ......+.. |..++| ++.+++ .++.|++
T Consensus 40 ~nlLais~~~gll~a~~~------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v 110 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASG------SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYS 110 (388)
T ss_dssp CBCEEEETTTTEEEEEET------TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEE
T ss_pred ccEEEEcCCCCEEEEeCC------CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEE
Confidence 444556665555556555 467779854322 223445667 999999 555555 8999999
Q ss_pred EEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcC
Q 015198 157 YSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATAST 236 (411)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~ 236 (411)
||+.+.........+..+ +..+.+.+.. +++ +..||.|.+|+........ +...|++++|+|+| ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~--v~~i~~~~p~--~av-~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKP--VFQLKNVNNT--LVI-LNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSC--EEEEEECSSE--EEE-EETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEET
T ss_pred EEchhhhccCccceeecc--eeeEEecCCC--EEE-EECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEc
Confidence 999876655555555543 3455555443 443 3479999999987554432 45689999999999 678899
Q ss_pred CCeEEEEEECCCCce--EEEEeC-------CCCCcceEEEEeCCCCCEEEEE
Q 015198 237 RGTLIRIFNTVDGTR--LQEVRR-------GVDRAEIYSIALSPNVQWLAVA 279 (411)
Q Consensus 237 dg~~I~vwd~~~~~~--~~~~~~-------~~~~~~v~~l~~spdg~~l~s~ 279 (411)
||. |++|+...++. ..++.. ..|...|.+|.|.+++.+|++=
T Consensus 181 dg~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 181 DRS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TSC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CCc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999 99999877775 566621 0155789999999999988863
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.11 E-value=3.9e-09 Score=95.65 Aligned_cols=262 Identities=13% Similarity=0.030 Sum_probs=158.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
.+.++...++|. |.+++++ +..||. +.+........... ....... ++.+.++.. + +.|..+|.. ++
T Consensus 61 ~~~~~~~~~~g~-l~v~t~~-l~~~d~-~g~~~~~~~~~~~~--~~~~~~~-~~~l~v~t~-~-----~~l~~~d~~-g~ 127 (330)
T 3hxj_A 61 IECRPSIGKDGT-IYFGSDK-VYAINP-DGTEKWRFDTKKAI--VSDFTIF-EDILYVTSM-D-----GHLYAINTD-GT 127 (330)
T ss_dssp EEECCEETTTTE-ECCSSCE-EEEECC-CGGGGGGSCC-------CCEEEE-TTEEEEECT-T-----SEEEEECTT-SC
T ss_pred cccceEEecCCc-EEEecCc-EEEECC-CCcEEEEEECCCCc--ccCceEE-CCEEEEEec-C-----CEEEEEcCC-CC
Confidence 346666666664 5555644 777775 33333222221111 1111112 454544433 3 899999987 88
Q ss_pred EEEEEe-ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEE
Q 015198 126 CIGEFA-FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIE 202 (411)
Q Consensus 126 ~~~~~~-~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~ 202 (411)
...... ....+.++...+++.+.+ .++.|+.+|.. ++.+..+......+. .+..+.++.+.+ ++ +.|..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~--~~~~d~~g~l~v--~t--~~l~~~ 200 (330)
T 3hxj_A 128 EKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITS--AASIGKDGTIYF--GS--DKVYAI 200 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCS--CCEECTTCCEEE--ES--SSEEEE
T ss_pred EEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCcee--eeEEcCCCEEEE--Ee--CEEEEE
Confidence 777666 444566777887777666 46999999988 877777765443333 333444555544 33 566666
Q ss_pred EcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC
Q 015198 203 HFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK 282 (411)
Q Consensus 203 ~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d 282 (411)
+.+++...........+.++...++|.+ ..++.++. |..+| .+++.+..+.. ....+..+.+.+++. |..++.+
T Consensus 201 d~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~g-l~~~~-~~g~~~~~~~~--~~~~~~~~~~~~~g~-l~v~t~~ 274 (330)
T 3hxj_A 201 NPDGTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGH-LYAIN-PDGTEKWRFKT--GKRIESSPVIGNTDT-IYFGSYD 274 (330)
T ss_dssp CTTSCEEEEECCSSCCCSCCEECTTSCE-EEEETTTE-EEEEC-TTSCEEEEEEC--SSCCCSCCEECTTSC-EEEECTT
T ss_pred CCCCcEEEEEccCCcceeceEECCCCeE-EEEcCCCe-EEEEC-CCCCEeEEeeC--CCCccccceEcCCCe-EEEecCC
Confidence 6666666666655667888889888864 45666777 88888 46777766664 233344455665664 6677888
Q ss_pred CcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeCCCce
Q 015198 283 GTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTH 362 (411)
Q Consensus 283 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (411)
|.|..+|. +++.. ..+.++....
T Consensus 275 ggl~~~d~-~g~~~--------------------------------------------------------~~~~~~~~~~ 297 (330)
T 3hxj_A 275 GHLYAINP-DGTEK--------------------------------------------------------WNFETGSWII 297 (330)
T ss_dssp CEEEEECT-TSCEE--------------------------------------------------------EEEECSSCCC
T ss_pred CCEEEECC-CCcEE--------------------------------------------------------EEEEcCCccc
Confidence 88999884 44321 1233333333
Q ss_pred EEEEEccCCEEEEEEeCCcEEEEEEecC
Q 015198 363 FIAAFGSQNTVVIVSMDGSFYRCSFDPV 390 (411)
Q Consensus 363 ~~~~~~~~~~~~~~~~dg~~~~~~~~~~ 390 (411)
..+....++.|.+++.+|.+++.....+
T Consensus 298 ~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 298 ATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred cceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 3445567789999999999998876653
No 225
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.11 E-value=2.6e-08 Score=89.43 Aligned_cols=190 Identities=12% Similarity=0.001 Sum_probs=115.5
Q ss_pred EEEEEeccCCeE-EEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ecCceeEEEEcCCeEEEE-E--cCeEEEEEcCCce
Q 015198 89 RIVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FRSDVRSVKLSRDRIVVV-L--EHKIYVYSFVDLK 163 (411)
Q Consensus 89 ~~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~--dg~i~iwd~~~~~ 163 (411)
......|++++. ++++...+ +.|..|+. +++. ..+. ....+..+.+++++++++ . ++.|.+|+.. ++
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~-----~~i~~~~~-~g~~-~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVG-----RRVLGWRE-DGTV-DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ 117 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTT-----TEEEEEET-TSCE-EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CccCCeEeCCCCEEEEEECCC-----CEEEEEeC-CCCE-EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC
Confidence 344567777764 55555555 89999997 5553 3443 567789999999998777 2 4689999975 55
Q ss_pred eeEEEeccCC--CcceEEEccCCCceEEEEe---cCC-------------CCeEEEEEcCCcceEEEeccccceeEEEec
Q 015198 164 LLHQIETLAN--LRGLCCLSHHSSTSVLACP---GLQ-------------RGQVRIEHFGLNMIKLINAHDSHIACFTLT 225 (411)
Q Consensus 164 ~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~---g~~-------------dg~i~i~~~~~~~~~~~~~~~~~i~~l~~s 225 (411)
.......... ......+..++++.++++. |.. .+.|+.++.....+..+. .......++|+
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~s 196 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFS 196 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEEC
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEc
Confidence 3322211111 0112234555667666531 211 234555555333333333 44556789999
Q ss_pred CCCCEEEEEcCC------CeEEEEEECCCCce--EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 226 LDGLLLATASTR------GTLIRIFNTVDGTR--LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 226 p~g~~l~s~s~d------g~~I~vwd~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
|+++.|+.+... +. |++|++..+.. ...+... ....+..++++++|++. +++.+| |.+|+.+
T Consensus 197 pdg~~lyv~~~~~~~~~~~~-i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~lw-v~~~~g-v~~~~~~ 266 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVE-ITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWLW-SSSGTG-VCVFDSD 266 (305)
T ss_dssp TTSSEEEEEECCC---CCCE-EEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCEE-ECCSSE-EEEECTT
T ss_pred CCCCEEEEEecCCcCCCCCE-EEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCEE-EecCCc-EEEECCC
Confidence 999987777665 67 99999876541 1122211 23345678999999954 444555 9999873
No 226
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=4.1e-07 Score=84.05 Aligned_cols=221 Identities=10% Similarity=0.049 Sum_probs=135.8
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCC-------CEEE-EEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSG-------GFRI-VEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
+..+++++ ++.|..+|.++++......+... ...+ ...... ++.+++... + +.|..+|..+|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~~-~-----g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS-GGHVYIGSE-K-----AQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE-TTEEEEEET-T-----SEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEe-CCEEEEEcC-C-----CEEEEEECCCCCE
Confidence 55677777 89999999998887777665221 1122 222233 344444433 3 8999999999999
Q ss_pred EEEEeecCcee-EEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCc-----ceEEEccCCCceEEEEecCCCCe
Q 015198 127 IGEFAFRSDVR-SVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLR-----GLCCLSHHSSTSVLACPGLQRGQ 198 (411)
Q Consensus 127 ~~~~~~~~~i~-~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~g~~dg~ 198 (411)
+........+. ..... ++.+++ .++.|+.+|..+++.+..+....... ....+. ++ .+++ +..++.
T Consensus 126 ~W~~~~~~~~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~-~v~~-g~~~g~ 199 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVS-DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA---FG-AAVV-GGDNGR 199 (376)
T ss_dssp EEEEECSSCCCSCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE---TT-EEEE-CCTTTE
T ss_pred EEEEeCCCceEcCCEEE-CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE---CC-EEEE-EcCCCE
Confidence 88887443332 22333 444444 68999999999999888776543211 111111 22 3333 567888
Q ss_pred EEEEEc-CCcceEEEeccccc----eeE---EEecC--CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 199 VRIEHF-GLNMIKLINAHDSH----IAC---FTLTL--DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 199 i~i~~~-~~~~~~~~~~~~~~----i~~---l~~sp--~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
+..++. +++.+......... +.. +.-.| .+..++.++.++. +..+|..+|+.+...... ....+.
T Consensus 200 l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~~----~~~~~~ 274 (376)
T 3q7m_A 200 VSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKRELG----SVNDFI 274 (376)
T ss_dssp EEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECCC----CEEEEE
T ss_pred EEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccCC----CCCCce
Confidence 887665 45555444322100 000 00111 2456777888899 999999999988776532 234444
Q ss_pred eCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 269 LSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 269 ~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
. ++..|+.++.++.|..+|..+++..
T Consensus 275 ~--~~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 275 V--DGNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp E--ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred E--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 4 3567888889999999999998743
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.03 E-value=1.6e-08 Score=92.84 Aligned_cols=217 Identities=7% Similarity=-0.071 Sum_probs=132.3
Q ss_pred cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecC----------CCCCCCCCeEEEEECCCCcEEEEEeec--
Q 015198 66 GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAG----------DNSQYPPTKVIIWDDHQSRCIGEFAFR-- 133 (411)
Q Consensus 66 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~d~~~~d~~i~vwd~~~~~~~~~~~~~-- 133 (411)
.|.++|.++.+.+-...... .. .+.+++++..+..+. .+ +.|.+||+.+++.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~--~P--~i~~spDg~~lyVan~~~~r~~~G~~~-----~~VsviD~~T~~vv~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF--LS--LAVAGHSGSDFALASTSFARSAKGKRT-----DYVEVFDPVTFLPIADIELPDA 117 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT--TC--EEEECTTSSCEEEEEEEETTTTSSSEE-----EEEEEECTTTCCEEEEEEETTS
T ss_pred eEEEEECCCCeEEEEEeCCC--CC--ceEECCCCCEEEEEcccccccccCCCC-----CEEEEEECCCCCEEEEEECCCc
Confidence 78899999877666555422 22 577888765444332 23 89999999999999998743
Q ss_pred ------CceeEEEEcCCeEEEE--E---cCeEEE--EEcCCceeeEEEeccCCC-c----ceEEEccCCCceE-------
Q 015198 134 ------SDVRSVKLSRDRIVVV--L---EHKIYV--YSFVDLKLLHQIETLANL-R----GLCCLSHHSSTSV------- 188 (411)
Q Consensus 134 ------~~i~~~~~~~~~~~~~--~---dg~i~i--wd~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~------- 188 (411)
.....+.++||+++++ . +..|.+ +|+.+ +..+...... + ...-+...+++.+
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~ 194 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAA 194 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCS
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECcc
Confidence 3467899999998776 2 357888 88865 3334221100 0 0000111111111
Q ss_pred ------------------------------EEEecCCCCeEEEEEcCCcc---eEEEec-------c---ccceeEEEec
Q 015198 189 ------------------------------LACPGLQRGQVRIEHFGLNM---IKLINA-------H---DSHIACFTLT 225 (411)
Q Consensus 189 ------------------------------l~~~g~~dg~i~i~~~~~~~---~~~~~~-------~---~~~i~~l~~s 225 (411)
+++.. . +.+.+-+..... +..+.. + ......++++
T Consensus 195 ~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs-~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s 272 (368)
T 1mda_H 195 APAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV-A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKL 272 (368)
T ss_dssp SCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB-S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEE
T ss_pred ccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc-C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEc
Confidence 11211 1 344442222111 111100 0 0111227899
Q ss_pred CCCCEEEEEcC-C--------CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCE-EEEEe-CCCcEEEEEccccc
Q 015198 226 LDGLLLATAST-R--------GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQW-LAVAS-DKGTVHIFSLRVRV 294 (411)
Q Consensus 226 p~g~~l~s~s~-d--------g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s-~dg~I~vwd~~~~~ 294 (411)
|+++.++.+.. . +. +.++|+.+++.+..+..+ .....|+|+|||++ +++.. .++.|.|+|+.+++
T Consensus 273 ~dg~~lyV~~~~~~~~~~~~~~~-~~ViD~~t~~vv~~i~vg---~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k 348 (368)
T 1mda_H 273 KNTDGIMILTVEHSRSCLAAAEN-TSSVTASVGQTSGPISNG---HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348 (368)
T ss_dssp TTTTEEEEEEEECSSCTTSCEEE-EEEEESSSCCEEECCEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE
T ss_pred CCCCEEEEEeccccCcccccCCC-EEEEECCCCeEEEEEECC---CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc
Confidence 99998876543 2 35 679999999998888752 26889999999984 55666 58999999999998
Q ss_pred cCCCCC
Q 015198 295 VGEDSS 300 (411)
Q Consensus 295 ~~~~~~ 300 (411)
....+.
T Consensus 349 vv~~I~ 354 (368)
T 1mda_H 349 DQSSVE 354 (368)
T ss_dssp EEEECC
T ss_pred EEEEEE
Confidence 765443
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.96 E-value=5.2e-07 Score=90.05 Aligned_cols=225 Identities=8% Similarity=0.029 Sum_probs=132.9
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCE---------EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGF---------RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
+..|++++ ++.|.-+|..+++.+.+........ ....+... ++.+++. ..+ +.|..+|..+|+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~-~~~v~v~-~~d-----g~l~alD~~tG~ 149 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALW-KGKVYVG-AWD-----GRLIALDAATGK 149 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEE-TTEEEEE-CTT-----SEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEE-CCEEEEE-cCC-----CEEEEEECCCCC
Confidence 44566666 8899999999888887766532110 00111222 3344444 333 999999999999
Q ss_pred EEEEEeec------CceeE-EEEcCCeEEEE--E------cCeEEEEEcCCceeeEEEeccCCCc---------------
Q 015198 126 CIGEFAFR------SDVRS-VKLSRDRIVVV--L------EHKIYVYSFVDLKLLHQIETLANLR--------------- 175 (411)
Q Consensus 126 ~~~~~~~~------~~i~~-~~~~~~~~~~~--~------dg~i~iwd~~~~~~~~~~~~~~~~~--------------- 175 (411)
.+..+... ..+.+ ..+. ++.+++ . ++.|+.||..+|+.+..+.......
T Consensus 150 ~~W~~~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~ 228 (677)
T 1kb0_A 150 EVWHQNTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAART 228 (677)
T ss_dssp EEEEEETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred EEeeecCCcCcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccc
Confidence 99888743 12222 2222 445555 2 6899999999999998886533210
Q ss_pred ---------------ceEEEccCCCceEEEEecCCCC-------------------eEEEEEc-CCcceEEEec--cc--
Q 015198 176 ---------------GLCCLSHHSSTSVLACPGLQRG-------------------QVRIEHF-GLNMIKLINA--HD-- 216 (411)
Q Consensus 176 ---------------~~~~~~~~~~~~~l~~~g~~dg-------------------~i~i~~~-~~~~~~~~~~--~~-- 216 (411)
....++.++++..+++ +..++ .|..++. +++.+..++. |.
T Consensus 229 w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~w 307 (677)
T 1kb0_A 229 WDPSGKWWEAGGGGTMWDSMTFDAELNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNW 307 (677)
T ss_dssp SCGGGCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred ccccCceeEeCCCcccccceeEcCCCCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccc
Confidence 0011233344444443 32332 3555443 4555555543 21
Q ss_pred -----cceeEEEecCCC---CEEEEEcCCCeEEEEEECCCCceEEEEeCCCCC---------cce---------------
Q 015198 217 -----SHIACFTLTLDG---LLLATASTRGTLIRIFNTVDGTRLQEVRRGVDR---------AEI--------------- 264 (411)
Q Consensus 217 -----~~i~~l~~sp~g---~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~---------~~v--------------- 264 (411)
.....+....+| ..|+.++.+|. |+++|..+|+.+..+...... .++
T Consensus 308 d~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~ 386 (677)
T 1kb0_A 308 DYTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAV 386 (677)
T ss_dssp CCCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECS
T ss_pred ccccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEEC
Confidence 112223333477 68899999999 999999999998877632100 011
Q ss_pred ---------EEEEeCCCCCEEEEEeCCCcEEEEEc
Q 015198 265 ---------YSIALSPNVQWLAVASDKGTVHIFSL 290 (411)
Q Consensus 265 ---------~~l~~spdg~~l~s~s~dg~I~vwd~ 290 (411)
..++|+|++.++++...+-...++..
T Consensus 387 P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~ 421 (677)
T 1kb0_A 387 PGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDD 421 (677)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEEC
T ss_pred cCcccccCCCCceEcCCCCEEEEeChhcceeeecc
Confidence 14678898888888776654455544
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.93 E-value=8.6e-07 Score=88.65 Aligned_cols=227 Identities=11% Similarity=0.081 Sum_probs=131.6
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCE--------E-EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGF--------R-IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
+..|++++ ++.|.-+|..+++.+.+........ . ...+... ++.+++.. .| +.|..+|.++|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~v~v~~-~d-----g~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVW-KGKVYVGV-LD-----GRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEEC-TT-----SEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEE-CCEEEEEc-cC-----CEEEEEECCCCC
Confidence 45666666 8899999999988888765422110 0 0011112 33444443 34 999999999999
Q ss_pred EEEEEeec-C--ceeEEEEcC---CeEEEE-E-------cCeEEEEEcCCceeeEEEeccC-CCc---------------
Q 015198 126 CIGEFAFR-S--DVRSVKLSR---DRIVVV-L-------EHKIYVYSFVDLKLLHQIETLA-NLR--------------- 175 (411)
Q Consensus 126 ~~~~~~~~-~--~i~~~~~~~---~~~~~~-~-------dg~i~iwd~~~~~~~~~~~~~~-~~~--------------- 175 (411)
.+..+... . ....+...| ++.+++ . ++.|+.||.++|+.+..+.... .+.
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 99887743 1 111111122 555555 2 6899999999999998876311 000
Q ss_pred -------------ceEEEccCCCceEEEEecCCCC-------------------eEEEEE-cCCcceEEEec--cc----
Q 015198 176 -------------GLCCLSHHSSTSVLACPGLQRG-------------------QVRIEH-FGLNMIKLINA--HD---- 216 (411)
Q Consensus 176 -------------~~~~~~~~~~~~~l~~~g~~dg-------------------~i~i~~-~~~~~~~~~~~--~~---- 216 (411)
....++.+++..++++ +..++ .|..++ .+++.+-.++. |.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~ 301 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYI-GVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDY 301 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccc
Confidence 0002333444444444 44444 255555 45666666553 21
Q ss_pred ---cceeEEEecCCCC---EEEEEcCCCeEEEEEECCCCceEEEEeCCCCC--------------------------c--
Q 015198 217 ---SHIACFTLTLDGL---LLATASTRGTLIRIFNTVDGTRLQEVRRGVDR--------------------------A-- 262 (411)
Q Consensus 217 ---~~i~~l~~sp~g~---~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~--------------------------~-- 262 (411)
.+.....+..+|+ .|+.++.+|. ++++|..+|+.+......... .
T Consensus 302 ~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~ 380 (689)
T 1yiq_A 302 TATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL 380 (689)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE
T ss_pred cCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeE
Confidence 1122222223665 7889999999 999999999988554421100 0
Q ss_pred ---------ceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 263 ---------EIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 263 ---------~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
.-..++|+|+..+|++...+....++...
T Consensus 381 ~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~ 418 (689)
T 1yiq_A 381 VTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIP 418 (689)
T ss_dssp ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCS
T ss_pred eCCCcccccCCCcceECCCCCEEEEeccccceeeeecc
Confidence 01126888988888888776555555433
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.93 E-value=2.9e-06 Score=78.55 Aligned_cols=190 Identities=12% Similarity=0.068 Sum_probs=121.1
Q ss_pred eEEEEecCCCCCCCCCeEEEEECCCC----cEEEEEe--------ecCceeEEEEcCCeEEEE--Ec------CeEEEEE
Q 015198 99 ILALVGAGDNSQYPPTKVIIWDDHQS----RCIGEFA--------FRSDVRSVKLSRDRIVVV--LE------HKIYVYS 158 (411)
Q Consensus 99 ~~~l~s~~~d~~~~d~~i~vwd~~~~----~~~~~~~--------~~~~i~~~~~~~~~~~~~--~d------g~i~iwd 158 (411)
..+++++..+ +.|.++|+.+. +.++.+. ....-..+...|++.++. .+ +.|.++|
T Consensus 96 ~~l~v~~l~s-----~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 96 RFLIVPGLRS-----SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CEEEEEBTTT-----CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEEC
T ss_pred CEEEEccCCC-----CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEE
Confidence 3455666665 99999998765 6666663 112455678889994444 33 6899999
Q ss_pred cCCceeeEEEeccCCCc-ceEEEccCCCceEEEEec------------------CCCCeEEEEEcCCc-ceEEEecc--c
Q 015198 159 FVDLKLLHQIETLANLR-GLCCLSHHSSTSVLACPG------------------LQRGQVRIEHFGLN-MIKLINAH--D 216 (411)
Q Consensus 159 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g------------------~~dg~i~i~~~~~~-~~~~~~~~--~ 216 (411)
.++++.+..+.....+. ....+.++++++.++++. .....|.+|+.... .+..+... .
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 99999999886443321 122244455566666642 13678999888653 44455442 1
Q ss_pred cceeEEEe--cCCCCEEEEEcC-----CCeEEEEEECCCCce--EEEEeCCCC----------------CcceEEEEeCC
Q 015198 217 SHIACFTL--TLDGLLLATAST-----RGTLIRIFNTVDGTR--LQEVRRGVD----------------RAEIYSIALSP 271 (411)
Q Consensus 217 ~~i~~l~~--sp~g~~l~s~s~-----dg~~I~vwd~~~~~~--~~~~~~~~~----------------~~~v~~l~~sp 271 (411)
.....+.| +|+++++++++. ....|.+|....++. +..+..... ......|.+|+
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23345545 999998888775 442388776655432 122111000 13467899999
Q ss_pred CCCEEEEEeC-CCcEEEEEcccc
Q 015198 272 NVQWLAVASD-KGTVHIFSLRVR 293 (411)
Q Consensus 272 dg~~l~s~s~-dg~I~vwd~~~~ 293 (411)
||++|+++.. .+.|.+||+...
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSST
T ss_pred CCCEEEEEeCCCCEEEEEEecCC
Confidence 9999987765 678999999744
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.90 E-value=1.9e-07 Score=84.42 Aligned_cols=218 Identities=9% Similarity=-0.022 Sum_probs=143.3
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ec
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FR 133 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~ 133 (411)
+..|.+++ ++.+..+|.+ ......... ....+..+...+++.++++. .+ +.|..+|.. ++.+..+. ..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~~~~g~l~vgt-~~-----~~l~~~d~~-g~~~~~~~~~~ 176 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT--KKAIYATPIVSEDGTIYVGS-ND-----NYLYAINPD-GTEKWRFKTND 176 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTSCEEEEC-TT-----SEEEEECTT-SCEEEEEECSS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC--CCceeeeeEEcCCCEEEEEc-CC-----CEEEEECCC-CCEeEEEecCC
Confidence 44567777 8999999987 455444443 22223333445566555544 33 899999988 88877776 45
Q ss_pred CceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEE
Q 015198 134 SDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLI 212 (411)
Q Consensus 134 ~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~ 212 (411)
..+.++...+++.+.+ . +.|+.+| .+++.+..+......+ .++..++++.+.+. +.++.|..++.+++.+..+
T Consensus 177 ~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~~~--~~~~~~~~g~l~v~--t~~~gl~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYWTV--TRPAISEDGTIYVT--SLDGHLYAINPDGTEKWRF 250 (330)
T ss_dssp CCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSCCC--SCCEECTTSCEEEE--ETTTEEEEECTTSCEEEEE
T ss_pred CceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCcce--eceEECCCCeEEEE--cCCCeEEEECCCCCEeEEe
Confidence 5677788877887777 6 9999999 7777776665444333 33444555555543 3566777766667766666
Q ss_pred eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 213 NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 213 ~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
......+..+.+.+++. |..++.++. |..+|. +++.+..+.. ....+.++...++|+ |..++.+|.+++...+.
T Consensus 251 ~~~~~~~~~~~~~~~g~-l~v~t~~gg-l~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDT-IYFGSYDGH-LYAINP-DGTEKWNFET--GSWIIATPVIDENGT-IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTCE-EEEECT-TSCEEEEEEC--SSCCCSCCEECTTCC-EEEECTTSCEEEEEC--
T ss_pred eCCCCccccceEcCCCe-EEEecCCCC-EEEECC-CCcEEEEEEc--CCccccceEEcCCCE-EEEEcCCCeEEEEeccc
Confidence 65555555666766665 666777888 999995 7887777664 344567777777876 56688999999988766
Q ss_pred ccc
Q 015198 293 RVV 295 (411)
Q Consensus 293 ~~~ 295 (411)
.++
T Consensus 325 ~~~ 327 (330)
T 3hxj_A 325 HHH 327 (330)
T ss_dssp ---
T ss_pred ccc
Confidence 543
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=2.4e-06 Score=74.12 Aligned_cols=196 Identities=12% Similarity=0.045 Sum_probs=134.8
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC--ceeEEEEcCCeEEEE--EcCeEEEEEcCCcee
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS--DVRSVKLSRDRIVVV--LEHKIYVYSFVDLKL 164 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~--~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~ 164 (411)
....+.+++++.++++.+.. ..+.|.++|+.+++.+..+.... ....+.+..+..+++ .++.+.++|..+++.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLY---GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECSTTEEEEEECST---TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCCCeEEEECCCC---CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 34567788866666665431 12899999999999999887433 334567776666666 589999999999999
Q ss_pred eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEeccc--c---ceeEEEecCCCCEEEEEcCCC
Q 015198 165 LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAHD--S---HIACFTLTLDGLLLATASTRG 238 (411)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~~--~---~i~~l~~sp~g~~l~s~s~dg 238 (411)
+..+... .+ ....++++++ .++++. .++.|.+.+.. .+.+..+.... . .++.+.|. +|++.+....++
T Consensus 99 ~~~i~~g-~~-~g~glt~Dg~--~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~ 172 (266)
T 2iwa_A 99 IKNFTHQ-MK-DGWGLATDGK--ILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTD 172 (266)
T ss_dssp EEEEECC-SS-SCCEEEECSS--SEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred EEEEECC-CC-CeEEEEECCC--EEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCC
Confidence 9998654 12 2244666543 333333 46788885544 45555554322 1 35678887 776555555677
Q ss_pred eEEEEEECCCCceEEEEeCCC-----------CCcceEEEEeCCCCCEE-EEEeCCCcEEEEEccccc
Q 015198 239 TLIRIFNTVDGTRLQEVRRGV-----------DRAEIYSIALSPNVQWL-AVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 239 ~~I~vwd~~~~~~~~~~~~~~-----------~~~~v~~l~~spdg~~l-~s~s~dg~I~vwd~~~~~ 294 (411)
. |.+.|..+++.+..+.... .......|+|+|+++.| +++...+.|.+.++....
T Consensus 173 ~-V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 173 C-IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp E-EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred e-EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 7 9999999999998887420 01256899999998755 555577889999988764
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=6.4e-08 Score=92.65 Aligned_cols=233 Identities=9% Similarity=0.007 Sum_probs=149.0
Q ss_pred CCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEec-c-CCeEEEEecCCC-------------CCCCCCeE
Q 015198 54 QDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLF-R-CNILALVGAGDN-------------SQYPPTKV 116 (411)
Q Consensus 54 ~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~l~s~~~d-------------~~~~d~~i 116 (411)
+||++|.+.. ++.|.+.|+++.+......+... .....+.+ . |++.++..+++. +...++.+
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g-~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNA-KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSC-CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCC-CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 4899998877 67799999998765543444222 23444444 2 555444443211 01123689
Q ss_pred EEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--E-c--------------------------------------CeEE
Q 015198 117 IIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--L-E--------------------------------------HKIY 155 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~-d--------------------------------------g~i~ 155 (411)
.++|..+.+.+.++...+....++++|++++++ . + +.|.
T Consensus 178 tvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 999999999999988655677888999887776 1 1 1355
Q ss_pred EEEcCC--cee-eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc-------------ceEEEeccccce
Q 015198 156 VYSFVD--LKL-LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN-------------MIKLINAHDSHI 219 (411)
Q Consensus 156 iwd~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~-------------~~~~~~~~~~~i 219 (411)
+.|.++ ++. +..+..... ..++.++||++++++++..+..|.+++.... .+..+. -....
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~---PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP 333 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANN---PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGP 333 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESS---CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCE
T ss_pred EEeCcccCCceeEEEEecCCC---ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCc
Confidence 666655 333 444443322 2335556677888888888899999777643 122222 23446
Q ss_pred eEEEecCCCCEEEEEcCCCeEEEEEECCC----------CceEEEEeCCCCCcce---EEEEeCCCCCEEEEEeC---CC
Q 015198 220 ACFTLTLDGLLLATASTRGTLIRIFNTVD----------GTRLQEVRRGVDRAEI---YSIALSPNVQWLAVASD---KG 283 (411)
Q Consensus 220 ~~l~~sp~g~~l~s~s~dg~~I~vwd~~~----------~~~~~~~~~~~~~~~v---~~l~~spdg~~l~s~s~---dg 283 (411)
..++|+|+|....+.-.|+. |.+||+.+ .+.+.++..+...+.. ..+.++|||++|+++.. |+
T Consensus 334 ~h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr 412 (595)
T 1fwx_A 334 LHTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDR 412 (595)
T ss_dssp EEEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTS
T ss_pred ceEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccc
Confidence 78999999954556667888 99999977 5677777763221111 12356799999998764 33
Q ss_pred cE-----------EEEEcccc
Q 015198 284 TV-----------HIFSLRVR 293 (411)
Q Consensus 284 ~I-----------~vwd~~~~ 293 (411)
+ .++|+..+
T Consensus 413 -~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 413 -FLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp -SCCCCSSCCEEEEEEECSSS
T ss_pred -cccCCCCCCCcceEEEcCCC
Confidence 4 88999443
No 234
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.90 E-value=2.3e-05 Score=68.87 Aligned_cols=257 Identities=13% Similarity=0.156 Sum_probs=176.2
Q ss_pred CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCC
Q 015198 65 CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRD 144 (411)
Q Consensus 65 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~ 144 (411)
..|.|.|+.......++.. .....+. +|...+++--.. ..+.++|+++.+.++.+.....|.--.|-.+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi-~AdsAIM----nP~~~ViALrag------~~LQiFnletK~klks~~~~e~VvfWkWis~ 117 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI-SADSAIM----NPASKVIALKAG------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC-CCSEEEE----CSSSSEEEEEET------TEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred CEEEEEECCCCCCcccccc-ccceeee----CCCccEEEEecC------CeEEEechHHhhhhcceecCCccEEEEecCC
Confidence 4688889987666666554 3333222 444433333222 8999999999999999998888988888766
Q ss_pred eEEEE-EcCeEEEEEcCC-ceeeEEEeccC--CCcceEEEccCCCceEEEEecC------CCCeEEEEEcCCcceEEEec
Q 015198 145 RIVVV-LEHKIYVYSFVD-LKLLHQIETLA--NLRGLCCLSHHSSTSVLACPGL------QRGQVRIEHFGLNMIKLINA 214 (411)
Q Consensus 145 ~~~~~-~dg~i~iwd~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~------~dg~i~i~~~~~~~~~~~~~ 214 (411)
..+.. .+..|+-|++.. ..+.+.+..|. ....++.+..+++.++++..|- -.|.+.++....+..+.+++
T Consensus 118 ~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieG 197 (365)
T 2xzh_A 118 NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEG 197 (365)
T ss_dssp SEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECC
T ss_pred CeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeee
Confidence 55554 999999999964 35666665543 2356788888998888877663 34677889999999999999
Q ss_pred cccceeEEEecCC---CCEEEEEcC--C-CeEEEEEECCCC---c-----eEEEE--eCCCCCcceEEEEeCCCCCEEEE
Q 015198 215 HDSHIACFTLTLD---GLLLATAST--R-GTLIRIFNTVDG---T-----RLQEV--RRGVDRAEIYSIALSPNVQWLAV 278 (411)
Q Consensus 215 ~~~~i~~l~~sp~---g~~l~s~s~--d-g~~I~vwd~~~~---~-----~~~~~--~~~~~~~~v~~l~~spdg~~l~s 278 (411)
|.+....+.+.-+ .++++.+.. . +. ++|-++... . ....+ .......-.-++..++.-..++.
T Consensus 198 haa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-LhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyv 276 (365)
T 2xzh_A 198 HAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 276 (365)
T ss_dssp SEEEEEEECCTTCSSCEEEEEEEEEETTEEE-EEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEE
T ss_pred eeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEE
Confidence 9887766554322 124444333 2 45 999998432 1 11111 11111234557888888888999
Q ss_pred EeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEeC
Q 015198 279 ASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHIP 358 (411)
Q Consensus 279 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (411)
-+.-|.|++||++++.+.- .-++.
T Consensus 277 iTK~G~ihlyDleTgt~i~--------------------------------------------------------~nrIS 300 (365)
T 2xzh_A 277 ITKYGYIHLYDLETGTCIY--------------------------------------------------------MNRIS 300 (365)
T ss_dssp EETTSEEEEEETTTCCEEE--------------------------------------------------------EEECC
T ss_pred EeCCcEEEEEEcccCcEEE--------------------------------------------------------EeccC
Confidence 9999999999999998651 33444
Q ss_pred CCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 359 EVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 359 ~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
.+.+.+.+...+ +.+++....|.|+--.+++
T Consensus 301 ~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 301 GETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred CCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 456666666544 8999999999888877776
No 235
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.87 E-value=4.6e-07 Score=88.56 Aligned_cols=236 Identities=8% Similarity=-0.039 Sum_probs=139.7
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCE--EEE-EEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGF--RIV-EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~ 131 (411)
+..+++++ ++.+..+|..+++.+....+..+.. .+. ..... ++.++++......-.++.|..+|..+|+.+..+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 44677777 8999999999888877766522110 110 00011 4455555432000012899999999999998887
Q ss_pred ecCce---------------------------------------eEEEEcCC-eEEEE-E-c----------------Ce
Q 015198 132 FRSDV---------------------------------------RSVKLSRD-RIVVV-L-E----------------HK 153 (411)
Q Consensus 132 ~~~~i---------------------------------------~~~~~~~~-~~~~~-~-d----------------g~ 153 (411)
..... ..+++.++ +.+.+ . + +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32211 12455553 33333 2 1 26
Q ss_pred EEEEEcCCceeeEEEeccCCC-------cceEEEccCCCce--EEEEecCCCCeEEEEE-cCCcceEEEeccc-------
Q 015198 154 IYVYSFVDLKLLHQIETLANL-------RGLCCLSHHSSTS--VLACPGLQRGQVRIEH-FGLNMIKLINAHD------- 216 (411)
Q Consensus 154 i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~l~~~g~~dg~i~i~~-~~~~~~~~~~~~~------- 216 (411)
|..+|.++|+.+..++...+. ...+.+....+++ .+++.++.+|.+++.+ .+++.+..+....
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~ 353 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKK 353 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccccc
Confidence 999999999999888653211 1111122112342 2333466788888855 4555554443211
Q ss_pred ------cce--------------------------eEEEecCCCCEEEEEc-----------------------------
Q 015198 217 ------SHI--------------------------ACFTLTLDGLLLATAS----------------------------- 235 (411)
Q Consensus 217 ------~~i--------------------------~~l~~sp~g~~l~s~s----------------------------- 235 (411)
.++ ..++++|+..+|++..
T Consensus 354 ~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 433 (571)
T 2ad6_A 354 VDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYP 433 (571)
T ss_dssp ECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred ccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceecc
Confidence 111 2357788877776653
Q ss_pred --------CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 236 --------TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 236 --------~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
.++. |..||+.+++.+.++... ..+....+...+..++.++.||.|+.||.++++..
T Consensus 434 ~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 434 GPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEK---FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CTTSTTSCCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CccccCCCCCCe-EEEEECCCCCEEEEecCC---CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 3467 999999999998887642 12222222334567778999999999999999854
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.87 E-value=1.8e-06 Score=74.08 Aligned_cols=193 Identities=13% Similarity=0.127 Sum_probs=128.6
Q ss_pred CCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCce--eEEEEcCCeEEEE--EcCeEEEEEcCC
Q 015198 86 GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDV--RSVKLSRDRIVVV--LEHKIYVYSFVD 161 (411)
Q Consensus 86 ~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~--~dg~i~iwd~~~ 161 (411)
.......+.|+ ++.++.+.+.+ ....|+++|+++++.+..+...... ..+.+..+..+++ .++.+.+||..+
T Consensus 41 ~~~ftqGL~~~-~~~LyestG~~---g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 41 TKAFTEGFFYR-NGYFYESTGLN---GRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEET---TEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTT
T ss_pred CCcccceEEEE-CCEEEEECCCC---CCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECcc
Confidence 33444556677 45666665553 1138999999999999998865554 3466777766666 599999999999
Q ss_pred ceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-CcceEEEecc--c---cceeEEEecCCCCEEEEEc
Q 015198 162 LKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-LNMIKLINAH--D---SHIACFTLTLDGLLLATAS 235 (411)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~~~~~~~~~~--~---~~i~~l~~sp~g~~l~s~s 235 (411)
.+.+.++...... ..++++. ..|+.+. .++.|.+.+.. .+.+..+... . ..++.+.|. +|++.+...
T Consensus 117 ~~~~~ti~~~~eG---~glt~dg--~~L~~Sd-Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w 189 (262)
T 3nol_A 117 LRQVRSFNYDGEG---WGLTHND--QYLIMSD-GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW 189 (262)
T ss_dssp CCEEEEEECSSCC---CCEEECS--SCEEECC-SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred CcEEEEEECCCCc---eEEecCC--CEEEEEC-CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc
Confidence 9999999765432 3344443 4444433 35678875544 5556665442 2 234557776 777666665
Q ss_pred CCCeEEEEEECCCCceEEEEeCCC----------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 236 TRGTLIRIFNTVDGTRLQEVRRGV----------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 236 ~dg~~I~vwd~~~~~~~~~~~~~~----------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
.++. |.+.|.++|+.+..+.... .....+.|+|+|+++.|++.+..= =++|.++
T Consensus 190 ~~~~-I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W-p~~~ev~ 253 (262)
T 3nol_A 190 QTNK-IVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW-PKVFEIT 253 (262)
T ss_dssp TSSE-EEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC-SEEEEEE
T ss_pred cCCe-EEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC-CceEEEE
Confidence 6777 9999999999998887521 113568999999988777666432 3444443
No 237
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.85 E-value=8.2e-07 Score=88.54 Aligned_cols=236 Identities=11% Similarity=0.026 Sum_probs=142.7
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCC--EEEE-EEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGG--FRIV-EMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~ 131 (411)
+..+++++ ++.|..+|.++++.+......... ..+. .... .++.+++.......-.++.|..+|..+|+.+..+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV-VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE-ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 45677777 999999999998888776652110 0000 0001 14455554332100023899999999999998886
Q ss_pred ec--Cc------------------------------eeEEEEcCCeEEEE---EcC-------------------eEEEE
Q 015198 132 FR--SD------------------------------VRSVKLSRDRIVVV---LEH-------------------KIYVY 157 (411)
Q Consensus 132 ~~--~~------------------------------i~~~~~~~~~~~~~---~dg-------------------~i~iw 157 (411)
.. .+ ...++++++...+. .++ .|..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 00 12357776543333 333 49999
Q ss_pred EcCCceeeEEEeccCC---------CcceEEEccCCCceEEEEecCCCCeEEEEEc-CCcceEEEeccc-----------
Q 015198 158 SFVDLKLLHQIETLAN---------LRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAHD----------- 216 (411)
Q Consensus 158 d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~----------- 216 (411)
|.++|+.+..+..... +.....+..+++..-+++.++.+|.+++.+. +++.+.......
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~ 355 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLAT 355 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTT
T ss_pred cCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccccc
Confidence 9999999988875322 1122223333332223445778999999654 455543222111
Q ss_pred -cc------------------------eeEEEecCCCCEEEEE------------------------------------c
Q 015198 217 -SH------------------------IACFTLTLDGLLLATA------------------------------------S 235 (411)
Q Consensus 217 -~~------------------------i~~l~~sp~g~~l~s~------------------------------------s 235 (411)
.+ -..++++|+..+++.. .
T Consensus 356 g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~ 435 (668)
T 1kv9_A 356 GRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAV 435 (668)
T ss_dssp CCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGG
T ss_pred CCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCC
Confidence 00 0125777776665541 1
Q ss_pred CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 236 TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 236 ~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
.+|. |..||+.+|+.+...... .......+...+.++++++.|+.|+.||.++++..
T Consensus 436 ~~g~-l~A~D~~tG~~~W~~~~~---~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 436 VSGA-LLAWDPVKQKAAWKVPYP---THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CEEE-EEEEETTTTEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccce-EEEEeCCCCcEEEEccCC---CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 2377 999999999998777642 22333344456788899999999999999998854
No 238
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.84 E-value=6.5e-06 Score=72.07 Aligned_cols=218 Identities=7% Similarity=-0.093 Sum_probs=130.3
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEEC
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
..+..++|++++..|..+. .+.|..++.+....... +.........+.+++ ++.++++.... +.|.++++
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~--~~~~~~~p~~ia~d~~~~~lyv~d~~~-----~~I~~~~~ 108 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTI--IRQDLGSPEGIALDHLGRTIFWTDSQL-----DRIEVAKM 108 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEE--ECTTCCCEEEEEEETTTTEEEEEETTT-----TEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEE--EECCCCCccEEEEEecCCeEEEEECCC-----CEEEEEEc
Confidence 3567999999877777666 78899999876432211 212223456666776 34555555444 89999997
Q ss_pred CCCcEEEEEee-cCceeEEEEcCC-eEEEE-E----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 122 HQSRCIGEFAF-RSDVRSVKLSRD-RIVVV-L----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 122 ~~~~~~~~~~~-~~~i~~~~~~~~-~~~~~-~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
........... ......++++|+ +.+.+ . .+.|..+++.. +....+... .......++.++++..|.++..
T Consensus 109 ~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQD-NLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECT-TCSCEEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEEC-CCCCCcEEEEcCCCCEEEEEEC
Confidence 65433222222 246789999994 55444 2 36888888753 333333211 1123445555555445555555
Q ss_pred CCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC
Q 015198 195 QRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ 274 (411)
Q Consensus 195 ~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 274 (411)
..+.|.+.+..+.....+.........+++. ++.++++....+. |.++|..+++.+..+..+ .......+++.|++.
T Consensus 187 ~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~-v~~~d~~~g~~~~~i~~g-~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 187 GTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNS-VIAMDLAISKEMDTFHPH-KQTRLYGITIALSQC 263 (267)
T ss_dssp TTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTE-EEEEETTTTEEEEEECCS-SCCCCCCEEEECSCC
T ss_pred CCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCe-EEEEeCCCCCceEEEccc-cccccceeeecCccC
Confidence 6778888777665443332222333566654 3434444445577 999999999998888753 112467788888764
No 239
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.81 E-value=4.2e-06 Score=81.83 Aligned_cols=233 Identities=7% Similarity=-0.028 Sum_probs=135.8
Q ss_pred EEEEe-CCcEEEEecCCCcceEEeecCCCCE--EEEE-EeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC
Q 015198 59 FAAGT-SCGFRIYNCEPFKETFRRDLKSGGF--RIVE-MLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS 134 (411)
Q Consensus 59 la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~ 134 (411)
|++++ |+.+.-+|..+++.+....+..... .+.. ... .++.+++..+.+..-.++.|+.+|.++|+.+..+....
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~ 202 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATG 202 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCC
Confidence 77777 9999999999888877765422100 0100 001 14455555431000012899999999999998887332
Q ss_pred ce---------------------------------------eEEEEcCCe-EEEE--Ec----------------CeEEE
Q 015198 135 DV---------------------------------------RSVKLSRDR-IVVV--LE----------------HKIYV 156 (411)
Q Consensus 135 ~i---------------------------------------~~~~~~~~~-~~~~--~d----------------g~i~i 156 (411)
.. ..+++.++. .+++ .+ +.|..
T Consensus 203 ~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~A 282 (599)
T 1w6s_A 203 PDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFG 282 (599)
T ss_dssp CHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEE
T ss_pred CccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEE
Confidence 21 123444433 3333 22 48999
Q ss_pred EEcCCceeeEEEeccCCCc-------ceEEEccC-CCc--eEEEEecCCCCeEEEEE-cCCcceEEEeccc---------
Q 015198 157 YSFVDLKLLHQIETLANLR-------GLCCLSHH-SST--SVLACPGLQRGQVRIEH-FGLNMIKLINAHD--------- 216 (411)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~--~~l~~~g~~dg~i~i~~-~~~~~~~~~~~~~--------- 216 (411)
+|.++|+.+..++...+.. ..+.+... .++ ..+++.++.+|.+++.+ .+++.+.......
T Consensus 283 ld~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~ 362 (599)
T 1w6s_A 283 RDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVD 362 (599)
T ss_dssp EETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEEC
T ss_pred EeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccc
Confidence 9999999998887643321 11112111 233 13334466889988855 4555544433110
Q ss_pred ----cce--------------------------eEEEecCCCCEEEEE--------------------------------
Q 015198 217 ----SHI--------------------------ACFTLTLDGLLLATA-------------------------------- 234 (411)
Q Consensus 217 ----~~i--------------------------~~l~~sp~g~~l~s~-------------------------------- 234 (411)
.++ ..++++|+..++++.
T Consensus 363 ~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p 442 (599)
T 1w6s_A 363 LKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGP 442 (599)
T ss_dssp TTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECT
T ss_pred cCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCC
Confidence 111 235667766655442
Q ss_pred -c------CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccccC
Q 015198 235 -S------TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 235 -s------~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+ ..|. |..||+.+|+.+.+.... .+...-.+...+.+++.++.|+.|+.||.++|+..
T Consensus 443 ~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 443 KGDRQNYEGLGQ-IKAYNAITGDYKWEKMER---FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp TSBTTTTBCCEE-EEEECTTTCCEEEEEEES---SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCCcccCCCcCe-EEEEECCCCCEEeEecCC---CCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 1 3467 999999999988777532 11211112235667778999999999999999864
No 240
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.81 E-value=2.2e-07 Score=84.87 Aligned_cols=200 Identities=8% Similarity=0.027 Sum_probs=120.6
Q ss_pred EEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe--------ecCceeEEEEcCCeEEEEE--------c
Q 015198 88 FRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA--------FRSDVRSVKLSRDRIVVVL--------E 151 (411)
Q Consensus 88 ~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~~--------d 151 (411)
.....+.+++++.++++.... .++.++||.+.+++ +..+. +-..+..+++++++++.+. +
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~---~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQF---YQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGG---GCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSC
T ss_pred CCcceEEECCCCCEEEEeCCC---CCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCC
Confidence 456677788888777774321 01324555544554 22221 2357899999999877662 3
Q ss_pred CeEEEEEcCCceeeEEEeccCC----CcceEEEccCCCceEEEEecC---CCCeEEEEEcCC-cceEEEecc--------
Q 015198 152 HKIYVYSFVDLKLLHQIETLAN----LRGLCCLSHHSSTSVLACPGL---QRGQVRIEHFGL-NMIKLINAH-------- 215 (411)
Q Consensus 152 g~i~iwd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~g~---~dg~i~i~~~~~-~~~~~~~~~-------- 215 (411)
..|.+||+.+++.+..+..... ......+..++++..+.++.. .++.|.+++... +..+.+..|
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 6899999999998877764321 011223333433223333443 567888877653 322222221
Q ss_pred ---------------------ccceeEEEecCCCCEEEEEcCCCeEEEEEECC---CCc--------eEEEEeCCCCCcc
Q 015198 216 ---------------------DSHIACFTLTLDGLLLATASTRGTLIRIFNTV---DGT--------RLQEVRRGVDRAE 263 (411)
Q Consensus 216 ---------------------~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~---~~~--------~~~~~~~~~~~~~ 263 (411)
...+..|+|+|+|+.|+.+...+..|..++.. .+. .+..+ + +...
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g--~~g~ 249 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-S--EKPI 249 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-E--ECCS
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-c--cCCC
Confidence 02357899999999888887766326666532 111 01111 1 2224
Q ss_pred eEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 264 IYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 264 v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
...++++++|.++++...++.|.+||..+++
T Consensus 250 pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 250 CDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 5678999999999998889999999984443
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.80 E-value=8e-10 Score=102.24 Aligned_cols=170 Identities=12% Similarity=-0.017 Sum_probs=94.0
Q ss_pred CeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCC-CceEE
Q 015198 114 TKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHS-STSVL 189 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 189 (411)
+.|+.||..+|+.+..+.. ..+.+..+..++.+++ .|+.|+.||.++|+.+..+..+... ....++.- .+..+
T Consensus 19 g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~--~~~~sp~~~~~~~v 95 (369)
T 2hz6_A 19 GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE--LVQASPCRSSDGIL 95 (369)
T ss_dssp SEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH--HHTTCSCC-----C
T ss_pred CEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc--ccccCceEecCCEE
Confidence 9999999999999988887 5565555566664444 5999999999998887665432110 00111111 12233
Q ss_pred EEecCCCCeEEEEEcC-CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEE
Q 015198 190 ACPGLQRGQVRIEHFG-LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA 268 (411)
Q Consensus 190 ~~~g~~dg~i~i~~~~-~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~ 268 (411)
+ .|+.++.|+.++.. ++.+..+..+. ...++|++..|++++.++. |+.||.++|+.+..+... ......
T Consensus 96 ~-~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~----~~~~~~ 165 (369)
T 2hz6_A 96 Y-MGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYT-ITMYDTKTRELRWNATYF----DYAASL 165 (369)
T ss_dssp C-CCEEEEEEEEECCC--------------------------EEEEEEEEE-EECCCSSSSSCCCEEEEE----EECCBC
T ss_pred E-EEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCE-EEEEECCCCCEEEeEecc----cccCcc
Confidence 3 46678889887754 56655555443 2345678888999999999 999999999887665531 122233
Q ss_pred eCCCC---CEEEEEeCCCcEEEEEccccccC
Q 015198 269 LSPNV---QWLAVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 269 ~spdg---~~l~s~s~dg~I~vwd~~~~~~~ 296 (411)
+..+. ..+++++.||.|+.||.++|+..
T Consensus 166 ~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 166 PEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp CCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred ccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 44432 45777889999999999998754
No 242
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.80 E-value=7.2e-06 Score=71.78 Aligned_cols=229 Identities=9% Similarity=-0.025 Sum_probs=132.6
Q ss_pred CCEEEEEeCCcEEEEecCCCcceE---EeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe
Q 015198 56 YGCFAAGTSCGFRIYNCEPFKETF---RRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 56 g~~la~g~dg~i~iw~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~ 131 (411)
|.+|+.+..+.|+.++++...... ...+.........+.+++ ++.++++.... +.|..+++..+.....+.
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~-----~~I~~~~~~g~~~~~~~~ 75 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISE-----PSIGRASLHGGEPTTIIR 75 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEEC
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCC-----CEEEEEecCCCCcEEEEE
Confidence 346666665678888887533210 001111123456777776 45555555544 899999987665433333
Q ss_pred e-cCceeEEEEcCC-eEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC--CCeEEEEEc
Q 015198 132 F-RSDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ--RGQVRIEHF 204 (411)
Q Consensus 132 ~-~~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--dg~i~i~~~ 204 (411)
. ......++++++ +.+.+ ..+.|.++++.... ...+.... ......+..++++..|.++... .+.|...+.
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~~~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVLFDTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEET
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEEEECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEec
Confidence 2 256789999985 44444 46789999986432 22232111 1133455555533333333322 467777666
Q ss_pred CCcceEEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE-eC
Q 015198 205 GLNMIKLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA-SD 281 (411)
Q Consensus 205 ~~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~ 281 (411)
++.....+. ..-.....+++++++..|+.+. ..+. |.++|+........+.. ......++.. +..|+.+ ..
T Consensus 154 dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~-I~~~~~~g~~~~~~~~~---~~~P~gi~~d--~~~lyva~~~ 227 (267)
T 1npe_A 154 DGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR-AECLNPAQPGRRKVLEG---LQYPFAVTSY--GKNLYYTDWK 227 (267)
T ss_dssp TSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTEEEEEEEEEC---CCSEEEEEEE--TTEEEEEETT
T ss_pred CCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE-EEEEecCCCceEEEecC---CCCceEEEEe--CCEEEEEECC
Confidence 665544443 2334568899999877665554 4566 99999865444333333 1234566654 4445444 45
Q ss_pred CCcEEEEEccccccCC
Q 015198 282 KGTVHIFSLRVRVVGE 297 (411)
Q Consensus 282 dg~I~vwd~~~~~~~~ 297 (411)
.+.|.++|..+++...
T Consensus 228 ~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 228 TNSVIAMDLAISKEMD 243 (267)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCeEEEEeCCCCCceE
Confidence 6789999999887543
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.80 E-value=4.4e-06 Score=75.39 Aligned_cols=234 Identities=10% Similarity=-0.009 Sum_probs=139.7
Q ss_pred CeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCC------------------CCEEEEEEeccC-CeEEEEec
Q 015198 46 ELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKS------------------GGFRIVEMLFRC-NILALVGA 105 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~-~~~~l~s~ 105 (411)
...+++|.++|+++.++. ++.|..|+.+..... ...... .......+.+.+ ++.++++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 456788999999788887 899999987653221 111000 012356677776 66666654
Q ss_pred CCCCCCCCCeEEEEECCCCcEEEEEe------ecCceeEEEEcC-CeEEEEEc--------------------CeEEEEE
Q 015198 106 GDNSQYPPTKVIIWDDHQSRCIGEFA------FRSDVRSVKLSR-DRIVVVLE--------------------HKIYVYS 158 (411)
Q Consensus 106 ~~d~~~~d~~i~vwd~~~~~~~~~~~------~~~~i~~~~~~~-~~~~~~~d--------------------g~i~iwd 158 (411)
.. +.|..+|..+++. ..+. .......+++.+ ++.+.+.| +.|+.||
T Consensus 99 ~~------~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d 171 (322)
T 2fp8_A 99 CY------YHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYD 171 (322)
T ss_dssp TT------TEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEE
T ss_pred CC------CCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEe
Confidence 43 4588888665532 2222 113467899999 88776621 5688899
Q ss_pred cCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc---ceEEEeccccceeEEEecCCCCEEEEEc
Q 015198 159 FVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN---MIKLINAHDSHIACFTLTLDGLLLATAS 235 (411)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~---~~~~~~~~~~~i~~l~~sp~g~~l~s~s 235 (411)
..+++.......... ...+++++++..|.++-...+.|..++..+. ....+....+ ...++++++|++.++..
T Consensus 172 ~~~~~~~~~~~~~~~---p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 172 PSTKETTLLLKELHV---PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp TTTTEEEEEEEEESC---CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEeccCCcc---CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 877665433322222 2234455566555544445678888665542 2222222223 67899999998766654
Q ss_pred C----------CCeEEEEEECCCCceEEEEeCCCC--CcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 236 T----------RGTLIRIFNTVDGTRLQEVRRGVD--RAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 236 ~----------dg~~I~vwd~~~~~~~~~~~~~~~--~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
. .+. |..+|. .++.+..+..... ...+..+++ .+++++++....+.|.++++....
T Consensus 248 ~~~~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 248 EELDGNMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp EETTSSTTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC----
T ss_pred CcccccccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccccc
Confidence 4 456 888886 5887777764211 234666766 456655555567789999986544
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.80 E-value=3.7e-06 Score=72.21 Aligned_cols=176 Identities=10% Similarity=0.097 Sum_probs=120.3
Q ss_pred EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeE--EEEcCCeEEEE--EcCeEEEEEcCCceee
Q 015198 90 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRS--VKLSRDRIVVV--LEHKIYVYSFVDLKLL 165 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~--~dg~i~iwd~~~~~~~ 165 (411)
...+.|+.+ .++.+.+.+ +.|+++|+++++.+..+ ....... +.+..+..+++ .++.+.+||..+++.+
T Consensus 57 tqGL~~~~~-~Ly~stG~~-----g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFHQG-HFFESTGHQ-----GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEETT-EEEEEETTT-----TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEECC-EEEEEcCCC-----CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEE
Confidence 345566654 555555555 88999999999998888 6555543 77777777776 5999999999999999
Q ss_pred EEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc-CCcceEEEecc--cc---ceeEEEecCCCCEEEEEcCCCe
Q 015198 166 HQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAH--DS---HIACFTLTLDGLLLATASTRGT 239 (411)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~--~~---~i~~l~~sp~g~~l~s~s~dg~ 239 (411)
.++...... ..++++. ..|+.+. .++.|.+.+. +.+.+..+... .. .++.+.|. +|++.+....+..
T Consensus 130 ~ti~~~~eG---wGLt~Dg--~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 130 RTTRYSGEG---WGLCYWN--GKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp EEEECSSCC---CCEEEET--TEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred EEEeCCCce---eEEecCC--CEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 999765432 3334443 4454443 4778888554 44555555432 22 34567776 7766665556777
Q ss_pred EEEEEECCCCceEEEEeCC-----------CCCcceEEEEeCCCCCEEEEEe
Q 015198 240 LIRIFNTVDGTRLQEVRRG-----------VDRAEIYSIALSPNVQWLAVAS 280 (411)
Q Consensus 240 ~I~vwd~~~~~~~~~~~~~-----------~~~~~v~~l~~spdg~~l~s~s 280 (411)
|.+.|.++|+.+..+... ......+.|+|+|+++.|++.+
T Consensus 203 -I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 203 -VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp -EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred -EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 999999999999888642 0123568999999876665544
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.79 E-value=4.6e-09 Score=97.10 Aligned_cols=216 Identities=12% Similarity=0.033 Sum_probs=115.1
Q ss_pred CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeec
Q 015198 55 DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFR 133 (411)
Q Consensus 55 ~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~ 133 (411)
++..+++++ |+.|..||..+++....... . .+....+..++..++.++.| +.|+.||..+|+.+..+...
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~---~~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-D---PVLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-C---CSCCCC-----CCEEECTTT-----CCEEEC-----CCSEECSCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-C---CceecceEcCCCEEEEeCCC-----CEEEEEECCCCceeeeeecc
Confidence 467888888 99999999999888777654 1 12222233455556666666 99999999999877665521
Q ss_pred --Ccee-EEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc-CCc
Q 015198 134 --SDVR-SVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLN 207 (411)
Q Consensus 134 --~~i~-~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~ 207 (411)
..+. +..+..++.+++ .++.|+.||.++|+.+..+..+.. ..+++ ++..+++ ++.++.|+.|+. +++
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p--~~~~v~~-~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSP--STSLLYL-GRTEYTITMYDTKTRE 151 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEE-EEEEEEEECCCSSSSS
T ss_pred CccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccc--cCCEEEE-EecCCEEEEEECCCCC
Confidence 1111 111113444443 689999999999999877765431 22333 3444544 557889988775 455
Q ss_pred ceEEEeccccceeEEEecCCC---CEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcce-EEEEeCCCCCEE----EEE
Q 015198 208 MIKLINAHDSHIACFTLTLDG---LLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEI-YSIALSPNVQWL----AVA 279 (411)
Q Consensus 208 ~~~~~~~~~~~i~~l~~sp~g---~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v-~~l~~spdg~~l----~s~ 279 (411)
.+..+..+. ....++..+. ..+++++.+|. |+.||..+|+.+..+.. ..++ ....++++|... +.+
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~---~~pv~~~~~~~~dg~~~v~~~~~~ 225 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQNY---ASPVVAFYVWQREGLRKVMHINVA 225 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEEC---SSCEEEEEECTTSSCEEECCEEEE
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEecC---CCceEEEEEecCCceEeccceeec
Confidence 544443221 1233344432 45677888999 99999999999888774 2344 344566676532 122
Q ss_pred eCCCcEEEEEccccc
Q 015198 280 SDKGTVHIFSLRVRV 294 (411)
Q Consensus 280 s~dg~I~vwd~~~~~ 294 (411)
++.++.+|..+|+
T Consensus 226 --~~~l~~ld~~tG~ 238 (369)
T 2hz6_A 226 --VETLRYLTFMSGE 238 (369)
T ss_dssp --HHHHHHHHHHHHH
T ss_pred --ccceeeeehhcCC
Confidence 4457778877776
No 246
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.77 E-value=2.8e-05 Score=79.34 Aligned_cols=236 Identities=13% Similarity=0.143 Sum_probs=149.2
Q ss_pred eEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 47 LISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 47 V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
|.++...+++.+.+ |+ ++.+..|+..+........ ......+.++....++.+.++... +.|..||..+++
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~-~~~~~~i~~i~~d~~g~lwigt~~------~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIP-ILGTKQIQAILQQSPTRIWVATEG------AGLFLINPKTKE 246 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC-----CCCEEEEEEEETTEEEEEEBS------SCEEEEETTTTE
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecC-CCCCCeeEEEEEcCCCCEEEEECC------CCeEEEeCCCCe
Confidence 88888888886555 55 6678889876533211111 112345666776667666665433 458889977765
Q ss_pred EEEEEee---------cCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccC-----CCcceEEEccCCCceEEE
Q 015198 126 CIGEFAF---------RSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLA-----NLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 126 ~~~~~~~---------~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~ 190 (411)
... +.+ ...|.++...+++.+.+ .++.|.+||..+++......... ....+.++..+.++.+.+
T Consensus 247 ~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 325 (795)
T 4a2l_A 247 IKN-YLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWL 325 (795)
T ss_dssp EEE-ECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEE
T ss_pred EEE-eecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEE
Confidence 433 322 35699999998887776 55689999987765443221110 112466777777777665
Q ss_pred EecCCCCeEEEEEcCCcceEEEec-------cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC------
Q 015198 191 CPGLQRGQVRIEHFGLNMIKLINA-------HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR------ 257 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~~~~~~~~~-------~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~------ 257 (411)
. ..++-|..++........+.. ....|.++...++|. |..|+.++. |..||..+++.......
T Consensus 326 g--t~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~G-l~~~~~~~~~~~~~~~~~~~~~~ 401 (795)
T 4a2l_A 326 G--TYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGG-LNLYNPITQRFTSYTLQEDESAR 401 (795)
T ss_dssp E--ESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSC-EEEECTTTCCEEEECCC------
T ss_pred E--ECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCC-eEEEcCCCCcEEEEecCCCCccc
Confidence 3 355566666554444333321 235689999988887 455777777 99999877664322111
Q ss_pred CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccccc
Q 015198 258 GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRVV 295 (411)
Q Consensus 258 ~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~ 295 (411)
......|.++...++|+.|..|+.++-|.+||.++++.
T Consensus 402 ~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 402 GIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCE
T ss_pred CCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcE
Confidence 11235799999988888566777766799999887653
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.76 E-value=1.3e-05 Score=68.23 Aligned_cols=194 Identities=14% Similarity=0.155 Sum_probs=127.4
Q ss_pred CCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCce--eEEEEcCCeEEEE--EcCeEEEEEcC
Q 015198 85 SGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDV--RSVKLSRDRIVVV--LEHKIYVYSFV 160 (411)
Q Consensus 85 ~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i--~~~~~~~~~~~~~--~dg~i~iwd~~ 160 (411)
........+.|+++. ++.+.+.+ ....|+.+|+.+++.+..+...... ..+.+..+..+++ .++.+.+||..
T Consensus 18 d~~~ftqGL~~~~~~-LyestG~~---g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 18 DTTAFTEGLFYLRGH-LYESTGET---GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp CTTCCEEEEEEETTE-EEEEECCT---TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCccccccEEEECCE-EEEECCCC---CCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 344455567777754 44444442 1259999999999999998855444 3456666666666 69999999999
Q ss_pred CceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc-CCcceEEEeccc-----cceeEEEecCCCCEEEEE
Q 015198 161 DLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GLNMIKLINAHD-----SHIACFTLTLDGLLLATA 234 (411)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~~~~~~~~~~~-----~~i~~l~~sp~g~~l~s~ 234 (411)
+.+.+.++...... ..++++. ..|+.+- .++.|.+.+. +.+.+..+.... ..++.+.+. +|++++..
T Consensus 94 tl~~~~ti~~~~~G---wglt~dg--~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 94 TLTPRARFRYPGEG---WALTSDD--SHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp TTEEEEEEECSSCC---CEEEECS--SCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred cCcEEEEEeCCCCc---eEEeeCC--CEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 99999999765432 3444543 3344433 3677888554 445555554322 234556665 77766655
Q ss_pred cCCCeEEEEEECCCCceEEEEeCCC-----------CCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 235 STRGTLIRIFNTVDGTRLQEVRRGV-----------DRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 235 s~dg~~I~vwd~~~~~~~~~~~~~~-----------~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
..+.. |.+.|.++|+.+..+.... .....+.|+++|+++.|.+.+.-= =++|.++
T Consensus 167 w~s~~-I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~w-p~~~~v~ 232 (243)
T 3mbr_X 167 WLTSR-IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRW-PMLYEIR 232 (243)
T ss_dssp TTTTE-EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTC-SEEEEEE
T ss_pred CCCCe-EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCC-CcEEEEE
Confidence 56777 9999999999998887320 123568999999887766655432 3455544
No 248
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.71 E-value=0.00017 Score=66.00 Aligned_cols=258 Identities=14% Similarity=0.179 Sum_probs=176.4
Q ss_pred CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcC
Q 015198 64 SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSR 143 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~ 143 (411)
+..|.|.|+.......++.. .....+ |.+...-..+=. . ..+.++|+++.+.++.+.....|.--.|-.
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi-~AdsAI--MnP~~~iiALra--g------~~lQiFnle~K~klks~~~~e~VvfWkWis 115 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPI-SADSAI--MNPASKVIALKA--G------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (494)
T ss_dssp CCEEEEEETTSTTSCEEEEC-CCSEEE--ECSSSSCEEEEE--T------TEEEEEETTTTEEEEEEECSSCCCEEEEEE
T ss_pred CCeEEEEECCCCCcceeccc-ccceee--eCCCCcEEEEec--C------CeEEEEchHHhhhhcceecCCCceEEEecC
Confidence 44788899987666665554 222222 223333333333 1 899999999999999999878888888754
Q ss_pred C-eEEEEEcCeEEEEEcCC-ceeeEEEeccC--CCcceEEEccCCCceEEEEecC------CCCeEEEEEcCCcceEEEe
Q 015198 144 D-RIVVVLEHKIYVYSFVD-LKLLHQIETLA--NLRGLCCLSHHSSTSVLACPGL------QRGQVRIEHFGLNMIKLIN 213 (411)
Q Consensus 144 ~-~~~~~~dg~i~iwd~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~------~dg~i~i~~~~~~~~~~~~ 213 (411)
+ ..-++.+..|+-|++.. ..+.+.+..|. ....++.+..+++.++++..|- -.|.+.++....+..+.+.
T Consensus 116 ~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ie 195 (494)
T 1bpo_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (494)
T ss_dssp TTEEEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEEC
T ss_pred CCeEEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchhe
Confidence 4 44455999999999964 35666665543 2356788888999888876653 3577888999999999999
Q ss_pred ccccceeEEEecCCC---CEEEEEcCC---CeEEEEEECCCC--------ceEEEE--eCCCCCcceEEEEeCCCCCEEE
Q 015198 214 AHDSHIACFTLTLDG---LLLATASTR---GTLIRIFNTVDG--------TRLQEV--RRGVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 214 ~~~~~i~~l~~sp~g---~~l~s~s~d---g~~I~vwd~~~~--------~~~~~~--~~~~~~~~v~~l~~spdg~~l~ 277 (411)
+|.+....+.+.-+. .+++.+... +. ++|-++... +....+ .......-..++..++.-..++
T Consensus 196 Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k-Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CSEEEEEEEECTTCSSEEEEEEEEECSTTCCE-EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeEEEecCCCCCCceEEEEEEecCCCcE-EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 998887766654222 244444432 56 999998542 111111 1111123455788888888899
Q ss_pred EEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCCCCCCCCCCcccccccccCcccccccceEEEEe
Q 015198 278 VASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISPSTGANPGSSLSFMRGVLPKYFSSEWSFAQFHI 357 (411)
Q Consensus 278 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (411)
..+.-|.|++||+.++.+.- .-++
T Consensus 275 viTK~G~i~lyDleTgt~i~--------------------------------------------------------~nrI 298 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIY--------------------------------------------------------MNRI 298 (494)
T ss_dssp EEETTSEEEEEETTTCCEEE--------------------------------------------------------EEEC
T ss_pred EEecCceEEEEecccceeee--------------------------------------------------------eecc
Confidence 99999999999999998651 2334
Q ss_pred CCCceEEEEEccC-CEEEEEEeCCcEEEEEEec
Q 015198 358 PEVTHFIAAFGSQ-NTVVIVSMDGSFYRCSFDP 389 (411)
Q Consensus 358 ~~~~~~~~~~~~~-~~~~~~~~dg~~~~~~~~~ 389 (411)
..+.+.+.+.... +.++++...|.|+--.+++
T Consensus 299 s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 299 SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred cCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 4456666666554 8899999999888877776
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=2.1e-05 Score=68.25 Aligned_cols=194 Identities=11% Similarity=-0.024 Sum_probs=124.1
Q ss_pred CeEEEEEcCCCCEEEEEe---CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 46 ELISVSWNQDYGCFAAGT---SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
....+.|++++.++++.+ ++.|+++|..+++......+.. ......+.+..+..+.++. .+ +.+.++|..
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~-~~-----~~v~viD~~ 94 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLLNEKLYQVVW-LK-----NIGFIYDRR 94 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEET-TC-----SEEEEEETT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEeCCEEEEEEe-cC-----CEEEEEECC
Confidence 357999999875554443 5789999999977666655522 2233345555555555543 44 999999999
Q ss_pred CCcEEEEEeec-CceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCC--Cc-ceEEEccCCCceEEEEecCCCC
Q 015198 123 QSRCIGEFAFR-SDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLAN--LR-GLCCLSHHSSTSVLACPGLQRG 197 (411)
Q Consensus 123 ~~~~~~~~~~~-~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~g~~dg 197 (411)
+.+.+.++... ..-..++......++. .++.|.++|..+.+.+..+..... ++ ....+.+. ++.+.+. ...++
T Consensus 95 t~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn-~~~~~ 172 (266)
T 2iwa_A 95 TLSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWAN-IWQTD 172 (266)
T ss_dssp TTEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE-ETTSS
T ss_pred CCcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEe-cCCCC
Confidence 99999998754 3334444433333333 568999999999998888865432 11 12233333 4444443 33456
Q ss_pred eEEE-EEcCCcceEEEeccc-------------cceeEEEecCCCCEE-EEEcCCCeEEEEEECCCC
Q 015198 198 QVRI-EHFGLNMIKLINAHD-------------SHIACFTLTLDGLLL-ATASTRGTLIRIFNTVDG 249 (411)
Q Consensus 198 ~i~i-~~~~~~~~~~~~~~~-------------~~i~~l~~sp~g~~l-~s~s~dg~~I~vwd~~~~ 249 (411)
.|.+ +..+++.+..+.... ...+.|+|+|+++.| +++...+. |.+.++...
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~~ 238 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHLV 238 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEEC
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEecc
Confidence 7776 656677777775321 245899999998755 55556677 888887543
No 250
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.69 E-value=3e-06 Score=79.01 Aligned_cols=99 Identities=13% Similarity=0.055 Sum_probs=68.3
Q ss_pred CeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--E-----------cCeEEEEEcCCceeeEEEecc-CCC----c
Q 015198 114 TKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--L-----------EHKIYVYSFVDLKLLHQIETL-ANL----R 175 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~-----------dg~i~iwd~~~~~~~~~~~~~-~~~----~ 175 (411)
+.|.++|..+++.+..+.....- .+.++||++.+. . ++.|.++|..+++.+..+... ... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~ 177 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGT 177 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSC
T ss_pred CeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCC
Confidence 69999999999999999854444 899999998666 2 467999999999999888653 100 0
Q ss_pred ceEEEccCCCceEEEEecCC-CCeEEEEEc-CCcceEEEe
Q 015198 176 GLCCLSHHSSTSVLACPGLQ-RGQVRIEHF-GLNMIKLIN 213 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~-dg~i~i~~~-~~~~~~~~~ 213 (411)
....+.+++++++++++... ++.|.+.+. ..+.+..+.
T Consensus 178 ~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 178 YQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred CcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 11234455666677665433 577888554 445555554
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.62 E-value=1.5e-05 Score=77.78 Aligned_cols=193 Identities=9% Similarity=0.022 Sum_probs=109.0
Q ss_pred CCCEEEEEe-CCcEEEEec-CCCcceEEeecCCCCE---------EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 55 DYGCFAAGT-SCGFRIYNC-EPFKETFRRDLKSGGF---------RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 55 ~g~~la~g~-dg~i~iw~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
++..++... ++.|.-+|. ++++.+.+..+..... ....+... ++.+++.. .+ +.|..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~~-~d-----g~l~alD~~t 134 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG-AGQIVKKQ-AN-----GHLLALDAKT 134 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE-TTEEEEEC-TT-----SEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE-CCEEEEEe-CC-----CEEEEEECCC
Confidence 344444444 688999999 8888877765422110 00011122 34444443 33 9999999999
Q ss_pred CcEEEEEeecC-----cee-EEEEcCCeEEEE--E------cCeEEEEEcCCceeeEEEeccCCCcc-------------
Q 015198 124 SRCIGEFAFRS-----DVR-SVKLSRDRIVVV--L------EHKIYVYSFVDLKLLHQIETLANLRG------------- 176 (411)
Q Consensus 124 ~~~~~~~~~~~-----~i~-~~~~~~~~~~~~--~------dg~i~iwd~~~~~~~~~~~~~~~~~~------------- 176 (411)
|+.+..+.... .+. ...+. ++.+++ . ++.|+.+|.++|+.+..+........
T Consensus 135 G~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 213 (571)
T 2ad6_A 135 GKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPH 213 (571)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccc
Confidence 99998877322 222 11222 445554 2 68999999999999988765322100
Q ss_pred -----------------------eEEEccCCCceEEEE-ecC----------CC----CeEEE-EEcCCcceEEEecc--
Q 015198 177 -----------------------LCCLSHHSSTSVLAC-PGL----------QR----GQVRI-EHFGLNMIKLINAH-- 215 (411)
Q Consensus 177 -----------------------~~~~~~~~~~~~l~~-~g~----------~d----g~i~i-~~~~~~~~~~~~~~-- 215 (411)
...++.+++...+++ ++. .+ +.|.. +..+++.+-.++..
T Consensus 214 ~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~ 293 (571)
T 2ad6_A 214 YGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPH 293 (571)
T ss_dssp GCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCC
Confidence 001222332223333 221 01 23554 44456665555422
Q ss_pred c--------cceeEEEecCCCC---EEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 216 D--------SHIACFTLTLDGL---LLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 216 ~--------~~i~~l~~sp~g~---~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
. .++ -+....+|+ .++.++.+|. ++++|..+|+.+..+..
T Consensus 294 d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 294 DEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred cccccccCCCCE-EEecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecc
Confidence 1 122 122224674 6778889999 99999999999887764
No 252
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.61 E-value=0.00013 Score=74.29 Aligned_cols=236 Identities=10% Similarity=0.084 Sum_probs=150.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecC------CCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLK------SGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...|.++...++|.+.+...++.+.+|+..+... ...... -....+.++....++.+.++.. +-|.
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-------~Gl~ 285 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEI-KNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF-------NDLN 285 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEE-EEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES-------SCEE
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeE-EEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC-------Chhh
Confidence 4578888888877655544366788898765332 111110 1134577777777776666542 4588
Q ss_pred EEECCCCcEEEEEe--------ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccC-----CCcceEEEcc
Q 015198 118 IWDDHQSRCIGEFA--------FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLA-----NLRGLCCLSH 182 (411)
Q Consensus 118 vwd~~~~~~~~~~~--------~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~~~~~ 182 (411)
+||..+++...... ....|.++...++|.+.+ .++.|..|+..+.+.. .+.... ....+.++..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp EEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEE
T ss_pred eEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEE
Confidence 89977765433221 135799999999888777 4688999987654332 222110 1124667777
Q ss_pred CCCceEEEEecCCCCeEEEEEcCCcceEEEec---------cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEE
Q 015198 183 HSSTSVLACPGLQRGQVRIEHFGLNMIKLINA---------HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQ 253 (411)
Q Consensus 183 ~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~---------~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~ 253 (411)
+.++.+.+ |..++-|..++........+.. ....|.++...++|++|..|+.++. |.+||..+++..
T Consensus 365 d~~g~lWi--Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~G-l~~~d~~~~~~~- 440 (795)
T 4a2l_A 365 DKDKNLWI--GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGG-LSILHRNSGQVE- 440 (795)
T ss_dssp CTTSCEEE--EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTE-EEEEETTTCCEE-
T ss_pred CCCCCEEE--EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCc-eeEEeCCCCcEE-
Confidence 77776664 3356567776665544444321 2356889999889986677777788 999998877643
Q ss_pred EEeC---CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 254 EVRR---GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 254 ~~~~---~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.+.. ......|.++...++|++.+. +.+| |.+||.++++
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~~~ 482 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQRS 482 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTTTE
T ss_pred EeecCCCCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCCCe
Confidence 3331 012357999999888886554 4455 9999987654
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.61 E-value=8.1e-05 Score=66.49 Aligned_cols=227 Identities=8% Similarity=0.034 Sum_probs=132.8
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
.....++|+++|+++++.. ++.|..|+.+. +....... ......+.+.+++.++++.... ....|..+|..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~---~~~p~gia~~~dG~l~vad~~~---~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV---EGKVSGLAFTSNGDLVATGWNA---DSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC---SSEEEEEEECTTSCEEEEEECT---TSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC---CCCceeEEEcCCCcEEEEeccC---CcceEEEEcCCC
Confidence 5678999999999777765 88888888765 22222222 2356677788877666554221 003577778778
Q ss_pred CcEEEEEee--cCceeEEEEcCCeEEEE---EcCeEEEEEcCCcee-eEEEec-------cCCCcceEEEccCCCceEEE
Q 015198 124 SRCIGEFAF--RSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKL-LHQIET-------LANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 124 ~~~~~~~~~--~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~l~ 190 (411)
++....... ......++..+++..++ .++.|+.+|...++. +..... .........+++ ++..|+
T Consensus 105 g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~--dg~~ly 182 (306)
T 2p4o_A 105 GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLY 182 (306)
T ss_dssp SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEE
T ss_pred CeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCc--CCCEEE
Confidence 776443332 22234555556665554 368899999765432 111111 011112233433 444555
Q ss_pred EecCCCCeEEEEEcCC--cc--eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEE
Q 015198 191 CPGLQRGQVRIEHFGL--NM--IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYS 266 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~--~~--~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~ 266 (411)
++-...+.|..++... .. ...+.. ......++++++|+++++....+. |.++|. .++..............++
T Consensus 183 v~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~-~G~~~~~~~~~~~~~~p~~ 259 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNS-VVRIAP-DRSTTIIAQAEQGVIGSTA 259 (306)
T ss_dssp EEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCC-EEEECT-TCCEEEEECGGGTCTTEEE
T ss_pred EEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCe-EEEECC-CCCEEEEeecccccCCceE
Confidence 5555677888866553 11 122211 134567899999988777666778 999996 4665332111112246899
Q ss_pred EEeC---CCCCEEEEEeCCC
Q 015198 267 IALS---PNVQWLAVASDKG 283 (411)
Q Consensus 267 l~~s---pdg~~l~s~s~dg 283 (411)
++|. ||++.|++++..+
T Consensus 260 ~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECCSTTTTTEEEEEECTT
T ss_pred EEEecccCCCCEEEEECCCC
Confidence 9998 8888777766544
No 254
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.60 E-value=2.8e-05 Score=66.74 Aligned_cols=184 Identities=9% Similarity=0.014 Sum_probs=116.8
Q ss_pred CCCCC--eEEEEEcCCCCEEEEEe-CC--cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 42 VDEIE--LISVSWNQDYGCFAAGT-SC--GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 42 ~h~~~--V~~l~~s~~g~~la~g~-dg--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
.|... ...|.|+ ++.++.+.+ +| .|+++|+++++......+ ........+....+..+.++... +.+
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~------~~v 109 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKN------GLG 109 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSS------SEE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeC------CEE
Confidence 44443 4788998 665555554 55 899999999877666665 33333334455566666665433 999
Q ss_pred EEEECCCCcEEEEEeecCceeEEEEcCCeEEEE---EcCeEEEEEcCCceeeEEEeccCC--Ccc-eEEEccCCCceEEE
Q 015198 117 IIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV---LEHKIYVYSFVDLKLLHQIETLAN--LRG-LCCLSHHSSTSVLA 190 (411)
Q Consensus 117 ~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~ 190 (411)
.++|..+.+.+.++.....=..++. ++..++ .++.|.++|..+.+.+..+....+ ++. ...+.+. ++.+.+
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG~glt~--dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEGWGLTH--NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp EEEETTTCCEEEEEECSSCCCCEEE--CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred EEEECccCcEEEEEECCCCceEEec--CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 9999999999999996554345554 343333 356799999999999888865322 211 1123333 455554
Q ss_pred EecCCCCeEEE-EEcCCcceEEEecc------------ccceeEEEecCCCCEEEEEcCC
Q 015198 191 CPGLQRGQVRI-EHFGLNMIKLINAH------------DSHIACFTLTLDGLLLATASTR 237 (411)
Q Consensus 191 ~~g~~dg~i~i-~~~~~~~~~~~~~~------------~~~i~~l~~sp~g~~l~s~s~d 237 (411)
.. ..++.|.+ +..+++.+..+... ....+.|+|+|+++.|+..+..
T Consensus 187 n~-w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 187 NV-WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp EE-TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred EE-ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 43 34556655 55566666666532 1345889999998877766654
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.57 E-value=7.6e-05 Score=72.93 Aligned_cols=236 Identities=11% Similarity=0.059 Sum_probs=134.4
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCC-------EEEEEEeccCCe--EEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGG-------FRIVEMLFRCNI--LALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
+..+++++ ++.+.-+|.++++.+....+.... ..++. .-..++ .+++.......-.++.|..+|..+|+
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIV-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEE-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEe-CCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 44666777 899999999988887776652211 11111 000011 44443321000012899999999999
Q ss_pred EEEEEeecC-ce-----------------------------------------eEEEEcCC-eEEEE-E-----------
Q 015198 126 CIGEFAFRS-DV-----------------------------------------RSVKLSRD-RIVVV-L----------- 150 (411)
Q Consensus 126 ~~~~~~~~~-~i-----------------------------------------~~~~~~~~-~~~~~-~----------- 150 (411)
.+....... .+ ..++++++ +.+.+ .
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 988765321 00 12345544 33333 2
Q ss_pred ----------c----CeEEEEEcCCceeeEEEeccCCC-------cceEEEccC-CCce--EEEEecCCCCeEEEEEc-C
Q 015198 151 ----------E----HKIYVYSFVDLKLLHQIETLANL-------RGLCCLSHH-SSTS--VLACPGLQRGQVRIEHF-G 205 (411)
Q Consensus 151 ----------d----g~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~--~l~~~g~~dg~i~i~~~-~ 205 (411)
| +.|..+|.++|+.+..++...+. ...+.+... .+++ .+++.++.+|.+++.+. +
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 58999999999999888653221 111222211 2332 23345678999998654 4
Q ss_pred CcceEEEeccc-------------cc--------------------------------eeEEEecCCCCEEEEEc-----
Q 015198 206 LNMIKLINAHD-------------SH--------------------------------IACFTLTLDGLLLATAS----- 235 (411)
Q Consensus 206 ~~~~~~~~~~~-------------~~--------------------------------i~~l~~sp~g~~l~s~s----- 235 (411)
++.+..+.... .+ -..++++|+..++++..
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 55444433221 00 01345666655544432
Q ss_pred ----------------------------CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEE
Q 015198 236 ----------------------------TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHI 287 (411)
Q Consensus 236 ----------------------------~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~v 287 (411)
.+|. |..||+.+|+.+.+..... ++..-.....+.+++.++.||.++.
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagglvf~g~~dg~l~A 511 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGS-LRAMDPVSGKVVWEHKEHL---PLWAGVLATAGNLVFTGTGDGYFKA 511 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEE-EEEECTTTCCEEEEEEESS---CCCSCCEEETTTEEEEECTTSEEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcce-EEEEECCCCCEEEEecCCC---CCcccceEeCCCEEEEECCCCcEEE
Confidence 2577 9999999999987776421 2221111224667888999999999
Q ss_pred EEccccccC
Q 015198 288 FSLRVRVVG 296 (411)
Q Consensus 288 wd~~~~~~~ 296 (411)
||.++|+..
T Consensus 512 ~D~~tG~~l 520 (582)
T 1flg_A 512 FDAKSGKEL 520 (582)
T ss_dssp EETTTCCEE
T ss_pred EECCCCCEE
Confidence 999999864
No 256
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.54 E-value=7e-05 Score=74.60 Aligned_cols=191 Identities=14% Similarity=0.128 Sum_probs=111.2
Q ss_pred CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEE---------EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 56 YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFR---------IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 56 g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
+..|++++ ++.|.-+|..+++.+.+......... ...+... ++.+++. ..+ +.|..+|..+|+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~-~~d-----g~l~alD~~tG~ 138 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW-GDKVYVG-TLD-----GRLIALDAKTGK 138 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE-BTEEEEE-CTT-----SEEEEEETTTCC
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE-CCEEEEE-cCC-----CEEEEEECCCCC
Confidence 44566666 88999999998888777654221100 0001112 2334444 334 999999999999
Q ss_pred EEEEEeec-----CceeE-EEEcCCeEEEE--E------cCeEEEEEcCCceeeEEEeccC-CCcc--------------
Q 015198 126 CIGEFAFR-----SDVRS-VKLSRDRIVVV--L------EHKIYVYSFVDLKLLHQIETLA-NLRG-------------- 176 (411)
Q Consensus 126 ~~~~~~~~-----~~i~~-~~~~~~~~~~~--~------dg~i~iwd~~~~~~~~~~~~~~-~~~~-------------- 176 (411)
.+..+... ..+.+ ..+. ++.+++ . ++.|+.+|.++|+.+..+.... .+..
T Consensus 139 ~~W~~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 217 (668)
T 1kv9_A 139 AIWSQQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTW 217 (668)
T ss_dssp EEEEEECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTC
T ss_pred EeeeeccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccC
Confidence 99888732 11111 1122 455555 2 5899999999999998886421 1100
Q ss_pred --------------eEEEccCCCceEEEEecCCCC-------------------eEEEEE-cCCcceEEEec--cc----
Q 015198 177 --------------LCCLSHHSSTSVLACPGLQRG-------------------QVRIEH-FGLNMIKLINA--HD---- 216 (411)
Q Consensus 177 --------------~~~~~~~~~~~~l~~~g~~dg-------------------~i~i~~-~~~~~~~~~~~--~~---- 216 (411)
...++.+++...+++ +..++ .|..++ .+++.+-.++. |.
T Consensus 218 ~g~~~w~~~~gg~~w~~~a~d~~~~~vy~-~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~ 296 (668)
T 1kv9_A 218 QGDQYWKLGGGGTVWDSMAYDPELDLLYV-GTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDF 296 (668)
T ss_dssp CSSCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCC
T ss_pred CccceeeeCCCCccccceEEcCCCCEEEE-eCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccc
Confidence 001233333334443 33443 255544 45566655543 22
Q ss_pred ---cceeEEEecCCCC---EEEEEcCCCeEEEEEECCCCceEEEEe
Q 015198 217 ---SHIACFTLTLDGL---LLATASTRGTLIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 217 ---~~i~~l~~sp~g~---~l~s~s~dg~~I~vwd~~~~~~~~~~~ 256 (411)
.+.....+..+|+ .|+.++.+|. ++++|..+|+.+..+.
T Consensus 297 ~~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 297 TATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAEK 341 (668)
T ss_dssp CCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred cCCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEecccc
Confidence 2222223334665 6888999999 9999999999886554
No 257
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.52 E-value=3e-05 Score=74.37 Aligned_cols=184 Identities=10% Similarity=0.015 Sum_probs=120.8
Q ss_pred CCeEEEE-ecCCCCCCCCCeEEEEECCCCcEEEEEe--ecCceeEEEE-c-CCeEEEE-E--------------------
Q 015198 97 CNILALV-GAGDNSQYPPTKVIIWDDHQSRCIGEFA--FRSDVRSVKL-S-RDRIVVV-L-------------------- 150 (411)
Q Consensus 97 ~~~~~l~-s~~~d~~~~d~~i~vwd~~~~~~~~~~~--~~~~i~~~~~-~-~~~~~~~-~-------------------- 150 (411)
+++.++. ....+ ..|.+.|+.+.++...+. .......+++ . |++.++. .
T Consensus 99 ~DG~~lfVnd~~~-----~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 99 YDGRFLFMNDKAN-----TRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp EEEEEEEEEETTT-----TEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred cCCCEEEEEcCCC-----CEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc
Confidence 3555444 44444 889999999999988665 4566888887 4 7777766 2
Q ss_pred cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC--------------Ce------------------
Q 015198 151 EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR--------------GQ------------------ 198 (411)
Q Consensus 151 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d--------------g~------------------ 198 (411)
++.+.+.|..+.+...++....++ ..+.+++ ++.+++++.... ..
T Consensus 174 ~~~vtvID~~t~~v~~qI~Vgg~p-d~~~~sp--dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~ 250 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAWQVLVSGNL-DNCDADY--EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDY 250 (595)
T ss_dssp EEEEEEEETTTTEEEEEEEESSCC-CCEEECS--SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCS
T ss_pred CceEEEEECCCCeEEEEEEeCCCc-cceEECC--CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCe
Confidence 357999999999999888764443 3355555 455665554332 11
Q ss_pred -----EEEEEcCC---cc-eEEEeccccceeEEEecCCCCEEEEEcC-CCeEEEEEECCCCc------------eEEEEe
Q 015198 199 -----VRIEHFGL---NM-IKLINAHDSHIACFTLTLDGLLLATAST-RGTLIRIFNTVDGT------------RLQEVR 256 (411)
Q Consensus 199 -----i~i~~~~~---~~-~~~~~~~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~~~~------------~~~~~~ 256 (411)
|.+-+... +. +..+.. .....++.++|||+++++++. +.. |.++|+.+.+ ...++.
T Consensus 251 ~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~-VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 251 QELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT-VTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp EEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSB-EEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred eEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCe-EEEEECcccccccccccCcccceEEEcC
Confidence 33322221 12 223322 223467899999998777664 556 9999998653 334444
Q ss_pred CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 257 RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 257 ~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
. ......++|+|+|...++.-.|++|.+||+++.
T Consensus 329 v---G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a 362 (595)
T 1fwx_A 329 L---GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDA 362 (595)
T ss_dssp C---CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHH
T ss_pred C---CCCcceEEECCCCeEEEEEecCCcEEEEEhhHh
Confidence 2 236789999999944456667999999999883
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.49 E-value=4.2e-05 Score=65.66 Aligned_cols=179 Identities=8% Similarity=0.018 Sum_probs=114.3
Q ss_pred eEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 47 LISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 47 V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
...|.|+. +.++.+.+ +|.|+++|+++++..... + ........+....+..+.++... +.+.+||..+.+
T Consensus 57 tqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~------~~v~V~D~~Tl~ 127 (268)
T 3nok_A 57 TQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTE------GLLFTWSGMPPQ 127 (268)
T ss_dssp EEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSS------CEEEEEETTTTE
T ss_pred cceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccC------CEEEEEECCcCc
Confidence 46788873 33444444 888999999997776665 5 33333334556666666665433 999999999999
Q ss_pred EEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCcc---eEEEccCCCceEEEEecCCCCeEEE
Q 015198 126 CIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLRG---LCCLSHHSSTSVLACPGLQRGQVRI 201 (411)
Q Consensus 126 ~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~g~~dg~i~i 201 (411)
.+.++.....-..++......++. .++.|+++|..+.+.+..+.....+.. ...+.+. ++.+.+.. ..+..|.+
T Consensus 128 ~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv-w~s~~I~v 205 (268)
T 3nok_A 128 RERTTRYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI-WHSSDVLE 205 (268)
T ss_dssp EEEEEECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE-TTCSEEEE
T ss_pred EEEEEeCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE-CCCCeEEE
Confidence 999999655555666554433333 578899999999999888865432211 1223333 44544443 34455555
Q ss_pred -EEcCCcceEEEecc-------------ccceeEEEecCCCCEEEEEcC
Q 015198 202 -EHFGLNMIKLINAH-------------DSHIACFTLTLDGLLLATAST 236 (411)
Q Consensus 202 -~~~~~~~~~~~~~~-------------~~~i~~l~~sp~g~~l~s~s~ 236 (411)
+..+++.+..+... ..-.+.|+++|+++.|+..+.
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 55566666666432 135688999998765555443
No 259
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.49 E-value=0.00016 Score=61.41 Aligned_cols=183 Identities=10% Similarity=0.041 Sum_probs=115.2
Q ss_pred CCeEEEEEcCCCCEEEEEe-C--CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC
Q 015198 45 IELISVSWNQDYGCFAAGT-S--CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-d--g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
.-...|.|+. +.++.+.+ + ..|+.+|+++++......+.. ...-..+....+..+.++... +.+.++|.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~------~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRN------HEGFVYDL 92 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSS------SEEEEEET
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeC------CEEEEEEC
Confidence 3456899987 44444444 3 489999999977766666533 322333445556666665433 99999999
Q ss_pred CCCcEEEEEeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEeccCCCc---ceEEEccCCCceEEEEecCCCC
Q 015198 122 HQSRCIGEFAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIETLANLR---GLCCLSHHSSTSVLACPGLQRG 197 (411)
Q Consensus 122 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~g~~dg 197 (411)
.+.+.+.++.....-..++......++. .++.|.++|..+.+.+..+....+.. ....+.+. ++.+.+..-. +.
T Consensus 93 ~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~-s~ 170 (243)
T 3mbr_X 93 ATLTPRARFRYPGEGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL-TS 170 (243)
T ss_dssp TTTEEEEEEECSSCCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT-TT
T ss_pred CcCcEEEEEeCCCCceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC-CC
Confidence 9999999999655556666544333333 56789999999999988886543211 11233333 4455544333 34
Q ss_pred eEEE-EEcCCcceEEEecc-------------ccceeEEEecCCCCEEEEEcCC
Q 015198 198 QVRI-EHFGLNMIKLINAH-------------DSHIACFTLTLDGLLLATASTR 237 (411)
Q Consensus 198 ~i~i-~~~~~~~~~~~~~~-------------~~~i~~l~~sp~g~~l~s~s~d 237 (411)
.|.+ +..+++.+..+... ..-.+.|+++|+++.|+..+..
T Consensus 171 ~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 171 RIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp EEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 5544 65666666666422 1356889999988766665543
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.45 E-value=0.00037 Score=63.44 Aligned_cols=236 Identities=7% Similarity=-0.061 Sum_probs=136.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCC
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQS 124 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~ 124 (411)
...|.+..+ ..+|+.+....|+..+++....... + ........+.|++ ++.++++.... +.|..+++..+
T Consensus 35 ~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~~~--~-~~~~~~~~l~~d~~~~~ly~~D~~~-----~~I~r~~~~g~ 105 (349)
T 3v64_C 35 RRSCKALGP-EPVLLFANRIDIRQVLPHRSEYTLL--L-NNLENAIALDFHHRRELVFWSDVTL-----DRILRANLNGS 105 (349)
T ss_dssp SSCEEESSS-CCEEEEECBSCEEEECTTSCCEEEE--E-CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSC
T ss_pred CCccccccc-CceeEeecccceEEEeCCCCeeEEe--e-cCCCceEEEEEeccccEEEEEeccC-----CceEEEecCCC
Confidence 345666666 4466666666677777765332222 2 2233466777774 45555554444 89999998766
Q ss_pred cEEEEEe-ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC-Ce
Q 015198 125 RCIGEFA-FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR-GQ 198 (411)
Q Consensus 125 ~~~~~~~-~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d-g~ 198 (411)
.....+. .......+++.+ .+.+.+ ..+.|.+.++........+..... ....++.++.+..|..+-... +.
T Consensus 106 ~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~--~P~~iavdp~~g~ly~td~~~~~~ 183 (349)
T 3v64_C 106 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE--KPRAIALHPMEGTIYWTDWGNTPR 183 (349)
T ss_dssp SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCS--CEEEEEEETTTTEEEEEECSSSCE
T ss_pred CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCC--CcceEEEecCcCeEEEeccCCCCE
Confidence 5444333 234567888886 344433 457899999864432222222222 234455554434444444344 67
Q ss_pred EEEEEcCCcceEEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEE
Q 015198 199 VRIEHFGLNMIKLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWL 276 (411)
Q Consensus 199 i~i~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l 276 (411)
|...+.++.....+. ..-.....|+++|++..|..+. ..+. |..+|+........+.. .......|++ .++.++
T Consensus 184 I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~-I~~~~~dG~~~~~~~~~--~~~~P~giav-~~~~ly 259 (349)
T 3v64_C 184 IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSLY 259 (349)
T ss_dssp EEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEECS--SCSSEEEEEE-ETTEEE
T ss_pred EEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCE-EEEEeCCCCceEEEEeC--CCCCceEEEE-ECCEEE
Confidence 777777765544432 2234567899998776666554 4556 99999864433322332 2335677888 345555
Q ss_pred EEEeCCCcEEEEEccccccC
Q 015198 277 AVASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 277 ~s~s~dg~I~vwd~~~~~~~ 296 (411)
++-...+.|..++-.+|+..
T Consensus 260 ~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 260 WTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp EEETTTTEEEEEETTTCCSC
T ss_pred EecCCCCeEEEEEccCCCcc
Confidence 55556777888876666544
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00024 Score=65.72 Aligned_cols=234 Identities=7% Similarity=-0.072 Sum_probs=135.0
Q ss_pred EEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 48 ISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 48 ~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
.|.+..+ ..+|+.+....|+.++++........ ........+.|++ ++.++++.... +.|..+++..+..
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~---~~~~~~~gl~~d~~~~~ly~~D~~~-----~~I~r~~~~g~~~ 150 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLL---NNLENAIALDFHHRRELVFWSDVTL-----DRILRANLNGSNV 150 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEE---CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCCE
T ss_pred eECCccc-cceeEeecCccceeeccCCCcEEEEe---cCCCccEEEEEecCCCeEEEEeCCC-----CcEEEEecCCCCc
Confidence 3445444 44566666667888887754332222 2333466777774 45555554444 8999999876654
Q ss_pred EEEEe-ecCceeEEEEcCC-eEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC-CeEE
Q 015198 127 IGEFA-FRSDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR-GQVR 200 (411)
Q Consensus 127 ~~~~~-~~~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d-g~i~ 200 (411)
...+. .......+++.+. +.+.+ ..+.|.+.++........+..... ....++.++.+..|+.+-... +.|.
T Consensus 151 ~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~--~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 151 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLE--KPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCS--CEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred EEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCC--CCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 44333 2334567888763 33333 456888888764332222222212 334444554444454444334 6777
Q ss_pred EEEcCCcceEEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEE
Q 015198 201 IEHFGLNMIKLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAV 278 (411)
Q Consensus 201 i~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s 278 (411)
..+.++.....+. ..-.....|+++|++..|+.+. ..+. |..+|+........+.. .......|++ ..+.++++
T Consensus 229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~--~~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHV-IERANLDGSHRKAVISQ--GLPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTE-EEEECTTSCSCEEEECS--SCSSEEEEEE-ETTEEEEE
T ss_pred EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCE-EEEEeCCCCeeEEEEEC--CCCCceEEEE-ECCEEEEe
Confidence 7777776555543 2334568899998776665554 4566 99999864433323332 2335678888 34555566
Q ss_pred EeCCCcEEEEEccccccC
Q 015198 279 ASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 279 ~s~dg~I~vwd~~~~~~~ 296 (411)
-...+.|..++..+++..
T Consensus 305 d~~~~~V~~~~~~~G~~~ 322 (386)
T 3v65_B 305 DWHTKSINSANKFTGKNQ 322 (386)
T ss_dssp ETTTTEEEEEETTTCCSC
T ss_pred eCCCCeEEEEECCCCcce
Confidence 666778888886666544
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.43 E-value=7.9e-05 Score=67.06 Aligned_cols=180 Identities=10% Similarity=0.045 Sum_probs=104.0
Q ss_pred EEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee---------------------cCceeEEEEcC-CeEEE
Q 015198 91 VEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF---------------------RSDVRSVKLSR-DRIVV 148 (411)
Q Consensus 91 ~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~---------------------~~~i~~~~~~~-~~~~~ 148 (411)
..+.+++++.++..+..+ +.|..||..+++.. .+.. ......+++.+ ++.++
T Consensus 22 ~~i~~d~~g~~l~v~~~~-----~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~ 95 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQD-----GRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLY 95 (322)
T ss_dssp CCEECCTTCSSEEEECTT-----SEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEE
T ss_pred eEEEEcCCCCEEEEEcCC-----CeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEE
Confidence 345567776634444444 89999997765543 2321 13578899997 77666
Q ss_pred E--EcCeEEEEEcCCceeeEEEeccC---CCcceEEEccCC-CceEEEEecC----------------CCCeEEEEEcCC
Q 015198 149 V--LEHKIYVYSFVDLKLLHQIETLA---NLRGLCCLSHHS-STSVLACPGL----------------QRGQVRIEHFGL 206 (411)
Q Consensus 149 ~--~dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~l~~~g~----------------~dg~i~i~~~~~ 206 (411)
+ ..+.|..+|..+++. ..+.... .......+..++ ++.+.++... .++.|..++...
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 5 345688888765543 2222111 011234456666 6665554322 135666666554
Q ss_pred cceEEEeccccceeEEEecCCCCEEEEE-cCCCeEEEEEECCCCc--eEEEEeCCCCCcceEEEEeCCCCCEEEEEeC
Q 015198 207 NMIKLINAHDSHIACFTLTLDGLLLATA-STRGTLIRIFNTVDGT--RLQEVRRGVDRAEIYSIALSPNVQWLAVASD 281 (411)
Q Consensus 207 ~~~~~~~~~~~~i~~l~~sp~g~~l~s~-s~dg~~I~vwd~~~~~--~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~ 281 (411)
..+..+...-.....|+++|+|++|+.+ ...+. |.+|++.... ....+.. ..+ ...+++.++|+++++...
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~-I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQ-IVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTE-EEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEEEE
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCe-EEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEecC
Confidence 4443333223445679999999866555 55677 9999987521 1222222 223 788999999986666544
No 263
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.42 E-value=8e-05 Score=72.82 Aligned_cols=193 Identities=8% Similarity=-0.016 Sum_probs=108.3
Q ss_pred CCCEEEEEe-CCcEEEEec-CCCcceEEeecCCCCE---------EEEEEecc-CCeE----EEEecCCCCCCCCCeEEE
Q 015198 55 DYGCFAAGT-SCGFRIYNC-EPFKETFRRDLKSGGF---------RIVEMLFR-CNIL----ALVGAGDNSQYPPTKVII 118 (411)
Q Consensus 55 ~g~~la~g~-dg~i~iw~~-~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~----~l~s~~~d~~~~d~~i~v 118 (411)
++.+++.+. ++.|.-+|. ++++.+.+........ ....+... .++. +++. ..+ +.|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~-t~d-----g~l~A 135 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKT-QLD-----GNVAA 135 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEE-CTT-----SEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEE-cCC-----CEEEE
Confidence 343444444 688888999 8888877765522110 00112221 1222 3333 334 99999
Q ss_pred EECCCCcEEEEEeecC-----ceeE-EEEcCCeEEEE-E-------cCeEEEEEcCCceeeEEEeccCCCcc--------
Q 015198 119 WDDHQSRCIGEFAFRS-----DVRS-VKLSRDRIVVV-L-------EHKIYVYSFVDLKLLHQIETLANLRG-------- 176 (411)
Q Consensus 119 wd~~~~~~~~~~~~~~-----~i~~-~~~~~~~~~~~-~-------dg~i~iwd~~~~~~~~~~~~~~~~~~-------- 176 (411)
+|..+|+.+....... .+.+ ..+. ++.+++ . ++.|+.+|.++|+.+..+........
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~ 214 (599)
T 1w6s_A 136 LNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFN 214 (599)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTT
T ss_pred EECCCCCEEEeecCCCCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccc
Confidence 9999999998876322 2221 1222 455555 2 68999999999999988865422100
Q ss_pred ----------------------------eEEEccCCCceEEEEecCC---------------CCeEEE-EEcCCcceEEE
Q 015198 177 ----------------------------LCCLSHHSSTSVLACPGLQ---------------RGQVRI-EHFGLNMIKLI 212 (411)
Q Consensus 177 ----------------------------~~~~~~~~~~~~l~~~g~~---------------dg~i~i-~~~~~~~~~~~ 212 (411)
-..++.+++..++++..+. .+.|.. +..+++.+-.+
T Consensus 215 ~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~ 294 (599)
T 1w6s_A 215 IKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGY 294 (599)
T ss_dssp TTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEE
T ss_pred cccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEe
Confidence 0011222233333332211 124444 44455555555
Q ss_pred ecccc----------ceeEEEec-CCC---CEEEEEcCCCeEEEEEECCCCceEEEEe
Q 015198 213 NAHDS----------HIACFTLT-LDG---LLLATASTRGTLIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 213 ~~~~~----------~i~~l~~s-p~g---~~l~s~s~dg~~I~vwd~~~~~~~~~~~ 256 (411)
+.... ++. +... .+| ..++.++.+|. ++++|..+|+.+....
T Consensus 295 q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 295 QKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANK 350 (599)
T ss_dssp ESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred ecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeeccc
Confidence 43211 121 2222 567 46778899999 9999999999987765
No 264
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.42 E-value=0.00083 Score=60.18 Aligned_cols=227 Identities=6% Similarity=-0.114 Sum_probs=130.6
Q ss_pred EEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCC---CcEEE-EEe-
Q 015198 58 CFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQ---SRCIG-EFA- 131 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~---~~~~~-~~~- 131 (411)
+|+.+....|+..++++....... ........+.|++ ++.++++.... +.|..+++.. +.... .+.
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~---~~~~~p~g~~~d~~~~~ly~~D~~~-----~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEE---CSCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEECS
T ss_pred EEEEECCCeEEEEECCCcceEehh---cCCCceEEEEEEeCCCEEEEEECCC-----CcEEEEECCCCCCCcccEEEEeC
Confidence 566677777899998874432222 2233456777775 34555555444 8999999775 12222 222
Q ss_pred ecCceeEEEEcC-CeEE-EE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC-CeEEEEEcCC
Q 015198 132 FRSDVRSVKLSR-DRIV-VV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR-GQVRIEHFGL 206 (411)
Q Consensus 132 ~~~~i~~~~~~~-~~~~-~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d-g~i~i~~~~~ 206 (411)
.-.....+++++ .+.+ ++ ..+.|.++++........+..... ....++.++.+..|+.+.... +.|...+.++
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~--~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG 152 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 152 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC--CEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCC--CcceEEeCCCCCEEEEEccCCCCeEEEEcCCC
Confidence 224567888875 3443 33 467899999865433322332222 334455554334444443333 6777776777
Q ss_pred cceEEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeC-CCCCcceEEEEeCCCCCEEEEEeCCC
Q 015198 207 NMIKLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRR-GVDRAEIYSIALSPNVQWLAVASDKG 283 (411)
Q Consensus 207 ~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~dg 283 (411)
.....+. ..-.....|++++++..|+.+. ..+. |..+|+.. .....+.. .........|++. .+.++++-...+
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~-I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~ 229 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 229 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe-EEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCC
Confidence 6655543 2334567899998877666555 4556 99999864 33333322 1122346778875 355555666677
Q ss_pred cEEEEEccccccCC
Q 015198 284 TVHIFSLRVRVVGE 297 (411)
Q Consensus 284 ~I~vwd~~~~~~~~ 297 (411)
.|..++..+++..+
T Consensus 230 ~V~~~~~~~g~~~~ 243 (316)
T 1ijq_A 230 AIFSANRLTGSDVN 243 (316)
T ss_dssp EEEEEETTTCCCCE
T ss_pred eEEEEeCCCCcceE
Confidence 89999887776543
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.40 E-value=0.00074 Score=68.61 Aligned_cols=235 Identities=11% Similarity=0.052 Sum_probs=140.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeec-----CCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEE
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDL-----KSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIW 119 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vw 119 (411)
..|.++...++|.+.+ |+.+.+.+|+..+......... ......+.++....++.+.++... +-|.++
T Consensus 211 ~~i~~i~~d~~g~lwi-gt~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~------~Gl~~~ 283 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWI-GTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIATEL------NGIMIL 283 (781)
T ss_dssp SSEEEEEECTTCCEEE-EETTEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEESS------SCEEEE
T ss_pred CceeEEEEcCCCCEEE-EeCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEeCC------CCeEEE
Confidence 5688998888887554 4534788998765322111000 012345777777777777666543 567888
Q ss_pred ECCCCcEEEEEe---------------ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEec--------cCCC
Q 015198 120 DDHQSRCIGEFA---------------FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIET--------LANL 174 (411)
Q Consensus 120 d~~~~~~~~~~~---------------~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~--------~~~~ 174 (411)
|..+++...... ....|.++...+++.+.+ .++.|..++..+.... .+.. ....
T Consensus 284 ~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~~ 362 (781)
T 3v9f_A 284 DLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLSN 362 (781)
T ss_dssp ETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCSS
T ss_pred CCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcce-eeccCccccccCCCCC
Confidence 877665332111 235689999998887666 4788999997654332 2211 0111
Q ss_pred cceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEE----eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc
Q 015198 175 RGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLI----NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT 250 (411)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~----~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~ 250 (411)
..+.++..+.++.+.+. ..++-|..++........+ ......|.++...++|.+.+ |+.++. |..+|..+++
T Consensus 363 ~~v~~i~~d~~g~lWig--t~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~G-l~~~~~~~~~ 438 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIG--TDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGN-ISYYNTRLKK 438 (781)
T ss_dssp SCEEEEEECTTSCEEEE--EBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEE-EEEECSSSCE
T ss_pred cceEEEEEcCCCCEEEE--eCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCC-EEEEcCCCCc
Confidence 24667777777766543 3344566655544332222 12346788999888887554 666677 9999987765
Q ss_pred eEEEEeC-CCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 251 RLQEVRR-GVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 251 ~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.. .+.. ......|.++...++|.+. .|+..| |..||..+++
T Consensus 439 ~~-~~~~~~~~~~~v~~i~~d~~g~lw-igt~~G-l~~~~~~~~~ 480 (781)
T 3v9f_A 439 FQ-IIELEKNELLDVRVFYEDKNKKIW-IGTHAG-VFVIDLASKK 480 (781)
T ss_dssp EE-ECCSTTTCCCCEEEEEECTTSEEE-EEETTE-EEEEESSSSS
T ss_pred EE-EeccCCCCCCeEEEEEECCCCCEE-EEECCc-eEEEeCCCCe
Confidence 43 3321 1134579999988888754 455544 8999887654
No 266
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.39 E-value=1e-05 Score=74.06 Aligned_cols=208 Identities=9% Similarity=-0.090 Sum_probs=115.2
Q ss_pred EEEEcCCCCEEEEEe-----------CCcEEEEecCCCcceEEeecCCCC-----EEEEEEeccCCeEEEEecCCCCCCC
Q 015198 49 SVSWNQDYGCFAAGT-----------SCGFRIYNCEPFKETFRRDLKSGG-----FRIVEMLFRCNILALVGAGDNSQYP 112 (411)
Q Consensus 49 ~l~~s~~g~~la~g~-----------dg~i~iw~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~s~~~d~~~~ 112 (411)
.+.++||+++++++. ++.|.+||..+.+......+.+.. .....+.++|++..++.+... .
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~---~ 145 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---S 145 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS---S
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC---C
Confidence 799999999998875 578999999997776665542110 223456778887655544321 0
Q ss_pred CCeEEE--EECCCCcEEEEEeecCce--------eEEEEcCCeEE-----------------------------------
Q 015198 113 PTKVII--WDDHQSRCIGEFAFRSDV--------RSVKLSRDRIV----------------------------------- 147 (411)
Q Consensus 113 d~~i~v--wd~~~~~~~~~~~~~~~i--------~~~~~~~~~~~----------------------------------- 147 (411)
...|.+ +|+.+ +..+...+.+ .-+.+++++.+
T Consensus 146 ~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~ 222 (368)
T 1mda_H 146 SAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP 222 (368)
T ss_dssp SCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT
T ss_pred CCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccC
Confidence 167888 88766 3333311100 00111111111
Q ss_pred ---EE--EcCeEEEEEcCCc--eeeEEEecc----------CCCcceEEEccCCCceEEEEecC---------CCCeEEE
Q 015198 148 ---VV--LEHKIYVYSFVDL--KLLHQIETL----------ANLRGLCCLSHHSSTSVLACPGL---------QRGQVRI 201 (411)
Q Consensus 148 ---~~--~dg~i~iwd~~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~g~---------~dg~i~i 201 (411)
+. . +.|.+.|+.+. +.+..+... ......+.++++.+ .++++.. .++.. +
T Consensus 223 ~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~--~lyV~~~~~~~~~~~~~~~~~-V 298 (368)
T 1mda_H 223 GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD--GIMILTVEHSRSCLAAAENTS-S 298 (368)
T ss_dssp TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT--EEEEEEEECSSCTTSCEEEEE-E
T ss_pred CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC--EEEEEeccccCcccccCCCEE-E
Confidence 11 2 44555555332 111111110 00011244555443 3433221 23444 6
Q ss_pred EE-cCCcceEEEeccccceeEEEecCCCC-EEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCC
Q 015198 202 EH-FGLNMIKLINAHDSHIACFTLTLDGL-LLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP 271 (411)
Q Consensus 202 ~~-~~~~~~~~~~~~~~~i~~l~~sp~g~-~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp 271 (411)
++ ...+.+..+.... ....++|+|||+ ++++.. .++. |.++|+.+++.+.++..+. ....+++.+
T Consensus 299 iD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~-VsVID~~t~kvv~~I~vg~---~P~~i~~~~ 366 (368)
T 1mda_H 299 VTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEV-LDIYDAASDQDQSSVELDK---GPESLSVQN 366 (368)
T ss_dssp EESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTE-EEEEESSSCEEEEECCCCS---CCCEEECCC
T ss_pred EECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCe-EEEEECCCCcEEEEEECCC---CCCEEEeec
Confidence 44 4455566665443 578999999998 455555 5888 9999999999999887532 345666644
No 267
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00037 Score=70.82 Aligned_cols=237 Identities=11% Similarity=0.033 Sum_probs=143.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEee-------cCCCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 43 DEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRD-------LKSGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
....|.++...++|. |-+|+ ++.|..|+........... -.-....+.++....++.+.++... +
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~------~ 383 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDG------G 383 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBS------S
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCC------C
Confidence 345799999999886 44566 8889999876533211110 0012345777777776665555422 5
Q ss_pred eEEEEECCCCcEEEEE---e-ecCceeEEEEcCCeEEEE-E-cCeEEEEEcCCceeeEEEec-cCCCcceEEEccCCCce
Q 015198 115 KVIIWDDHQSRCIGEF---A-FRSDVRSVKLSRDRIVVV-L-EHKIYVYSFVDLKLLHQIET-LANLRGLCCLSHHSSTS 187 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~~-~-dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (411)
-|..||..+++..... . ....|.++...+++.+.+ . ++.|..+|..+++.. .+.. ......+.++..++++.
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~ 462 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK 462 (781)
T ss_dssp CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE
T ss_pred cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC
Confidence 6888886654332211 1 246789999888777666 4 578999998776543 2221 11123566777777777
Q ss_pred EEEEecCCCCeEEEEEcCCcceEEEec-c-----ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC--CC
Q 015198 188 VLACPGLQRGQVRIEHFGLNMIKLINA-H-----DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR--GV 259 (411)
Q Consensus 188 ~l~~~g~~dg~i~i~~~~~~~~~~~~~-~-----~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~--~~ 259 (411)
+.+.+ .. -|..++........+.. . ...|.++...++|.+.+ |+..+. |..||..+++. ..+.. ..
T Consensus 463 lwigt--~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~G-l~~~~~~~~~~-~~~~~~~~l 536 (781)
T 3v9f_A 463 IWIGT--HA-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGG-VGIYTPDMQLV-RKFNQYEGF 536 (781)
T ss_dssp EEEEE--TT-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSC-EEEECTTCCEE-EEECTTTTC
T ss_pred EEEEE--CC-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCC-EEEEeCCCCeE-EEccCCCCC
Confidence 66543 34 45555554433333322 1 35788999999998555 454445 88899766543 34432 11
Q ss_pred CCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 260 DRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 260 ~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
....|.++...++|.+.+ ++.+|-|..||..+++
T Consensus 537 ~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 537 CSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFD 570 (781)
T ss_dssp SCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCC
T ss_pred CCCeeEEEEECCCCCEEE-EECCCceEEECCCCCc
Confidence 234789999999888554 4456744888776554
No 268
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=0.0014 Score=60.87 Aligned_cols=229 Identities=7% Similarity=-0.107 Sum_probs=133.1
Q ss_pred CEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCC----cEEEEEe
Q 015198 57 GCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQS----RCIGEFA 131 (411)
Q Consensus 57 ~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~----~~~~~~~ 131 (411)
.+|+.+....|+..+++........ .....+..+.|++ ++.++.+.... +.|+.+++... .....+.
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~---~~~~~~~~l~~d~~~~~lywsD~~~-----~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEE---CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC------CCCEEEEC
T ss_pred ceeEEeccceeEEEccCCcceeEec---cccCcceEEeeeeccCceEEEecCC-----CeEEEEEcccCCCCCcceEEEe
Confidence 4666667788888888764433222 3344566777775 44555554444 88999987652 2222233
Q ss_pred -ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec-CCCCeEEEEEcC
Q 015198 132 -FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFG 205 (411)
Q Consensus 132 -~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~ 205 (411)
.......+++.+ .+.+.+ ..+.|.+.++........+..... ....++.++.+..|+.+- ...+.|...+.+
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~--~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSC--CEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCC--CcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 345667888886 344333 467899999865444333332222 234455554333444433 234677777777
Q ss_pred CcceEEEe-ccccceeEEEecCCCCEEEEEcC-CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCC
Q 015198 206 LNMIKLIN-AHDSHIACFTLTLDGLLLATAST-RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKG 283 (411)
Q Consensus 206 ~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg 283 (411)
+.....+. ..-.....|++++++..|+.+.. .+. |..+|+........+...........|++. .+.++++-...+
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~-I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~ 311 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 311 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSC
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE-EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCC
Confidence 76555543 23356789999988777766654 456 999998644333233321122345677773 344555666677
Q ss_pred cEEEEEccccccCC
Q 015198 284 TVHIFSLRVRVVGE 297 (411)
Q Consensus 284 ~I~vwd~~~~~~~~ 297 (411)
.|..++..+|+...
T Consensus 312 ~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 312 AIFSANRLTGSDVN 325 (400)
T ss_dssp SEEEEESSSCCCCE
T ss_pred eEEEEEcCCCCceE
Confidence 89999977776553
No 269
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.29 E-value=0.00059 Score=66.65 Aligned_cols=107 Identities=6% Similarity=0.026 Sum_probs=62.9
Q ss_pred CEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEE-------EEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEE
Q 015198 57 GCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRI-------VEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIG 128 (411)
Q Consensus 57 ~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~ 128 (411)
..+++++ ++.|.-+|.++++.+.+.......... ..+... ++.+++.. .+ +.|..+|.++|+.+.
T Consensus 69 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~-~~~v~~~t-~d-----g~l~AlD~~TG~~~W 141 (582)
T 1flg_A 69 GVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY-GDKVFFGT-LD-----ASVVALNKNTGKVVW 141 (582)
T ss_dssp TEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE-TTEEEEEE-TT-----TEEEEEESSSCCEEE
T ss_pred CEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE-CCEEEEEe-CC-----CEEEEEECCCCCEEe
Confidence 3454555 456888899888888777653221000 011122 33444433 23 899999999999998
Q ss_pred EEeecC-----cee-EEEEcCC---e--EEEE-E-------cCeEEEEEcCCceeeEEEec
Q 015198 129 EFAFRS-----DVR-SVKLSRD---R--IVVV-L-------EHKIYVYSFVDLKLLHQIET 170 (411)
Q Consensus 129 ~~~~~~-----~i~-~~~~~~~---~--~~~~-~-------dg~i~iwd~~~~~~~~~~~~ 170 (411)
...... .+. ...+..+ + .+++ . ++.|+.+|..+|+.+.....
T Consensus 142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~ 202 (582)
T 1flg_A 142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPF 202 (582)
T ss_dssp EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEES
T ss_pred eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCC
Confidence 876321 121 1112222 2 3444 2 68999999999998876643
No 270
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.26 E-value=0.00057 Score=60.91 Aligned_cols=189 Identities=9% Similarity=-0.033 Sum_probs=109.4
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEEEc-----CeEEEEEcCCce
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLE-----HKIYVYSFVDLK 163 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~d-----g~i~iwd~~~~~ 163 (411)
....+.+++++.++++.... +.|..||... +....+........+++.+++.+++.+ ..|..+|..+++
T Consensus 33 ~pegia~~~~g~lyv~d~~~-----~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEV-----GEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTT-----TEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CcceEEECCCCCEEEEeCCC-----CeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 34566777777766665554 8999999654 444455556678899999998876622 247777877776
Q ss_pred eeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCcc--eEEEec---------cccceeEEEecCCCCEEE
Q 015198 164 LLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNM--IKLINA---------HDSHIACFTLTLDGLLLA 232 (411)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~--~~~~~~---------~~~~i~~l~~sp~g~~l~ 232 (411)
........... ..-.....+++..++ +...++.|+..+..... +..... .-...+.+ +++++.|+
T Consensus 107 ~~~~~~~~~~~-~~~g~~~~~~~~~~v-~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~ly 182 (306)
T 2p4o_A 107 VETLLTLPDAI-FLNGITPLSDTQYLT-ADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLY 182 (306)
T ss_dssp EEEEEECTTCS-CEEEEEESSSSEEEE-EETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEE
T ss_pred EEEEEeCCCcc-ccCcccccCCCcEEE-EECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEE
Confidence 54333321111 111112123333333 33346777775554321 111110 11123445 78887665
Q ss_pred EEc-CCCeEEEEEECCC-Cce--EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcc
Q 015198 233 TAS-TRGTLIRIFNTVD-GTR--LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 233 s~s-~dg~~I~vwd~~~-~~~--~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~ 291 (411)
.+. ..+. |..||+.. ++. ...+... .....++++++|+++++....+.|.+++.+
T Consensus 183 v~d~~~~~-I~~~~~~~~g~~~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 183 VSNTEKML-LLRIPVDSTDKPGEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp EEETTTTE-EEEEEBCTTSCBCCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred EEeCCCCE-EEEEEeCCCCCCCccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 554 4566 99999864 331 1222211 235668999999887776677889999864
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.26 E-value=0.00093 Score=57.49 Aligned_cols=197 Identities=7% Similarity=0.002 Sum_probs=114.4
Q ss_pred ccCCCCCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeE
Q 015198 39 FSDVDEIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 39 ~~~~h~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i 116 (411)
.+.+-...+..++|+|++..|++.. ++.|...|.. .+......+ .+....-.+.+.+++.++++...+ +.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~E~~-----~~l 93 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-DFVKDLETIEYIGDNQFVISDERD-----YAI 93 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-SSCSSEEEEEECSTTEEEEEETTT-----TEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-CCCCChHHeEEeCCCEEEEEECCC-----CcE
Confidence 3455566899999999877666544 6667777766 343333334 333345556666777776665555 889
Q ss_pred EEEECCCCcE---EEEEe-------ecCceeEEEEcCCe--EEEE-Ec-C-eEEEEEc-CCceeeEEEec-------cCC
Q 015198 117 IIWDDHQSRC---IGEFA-------FRSDVRSVKLSRDR--IVVV-LE-H-KIYVYSF-VDLKLLHQIET-------LAN 173 (411)
Q Consensus 117 ~vwd~~~~~~---~~~~~-------~~~~i~~~~~~~~~--~~~~-~d-g-~i~iwd~-~~~~~~~~~~~-------~~~ 173 (411)
.++++..... +.... .+.....++|+|++ .+++ .. . .|+.|+- ...+.+..+.. ...
T Consensus 94 ~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 94 YVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 9998665442 23332 13345899999976 3333 22 2 4555551 11122222211 111
Q ss_pred CcceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEeccc---------cceeEEEecCCCCEEEEEcCCCeEEEEE
Q 015198 174 LRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHD---------SHIACFTLTLDGLLLATASTRGTLIRIF 244 (411)
Q Consensus 174 ~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~---------~~i~~l~~sp~g~~l~s~s~dg~~I~vw 244 (411)
....+++.+. ...+.+.......+.+.+.+++.+..+.-.. ..-..|+|.++|+++++ ++.+. +++|
T Consensus 174 d~S~l~~dp~--tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~-~y~f 249 (255)
T 3qqz_A 174 DVSGAEFNQQ--KNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNR-FYRF 249 (255)
T ss_dssp CCCEEEEETT--TTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTE-EEEE
T ss_pred CceeEEEcCC--CCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCce-EEEE
Confidence 2234444443 3333333456677777888888666654332 25578999999985554 66666 8877
Q ss_pred EC
Q 015198 245 NT 246 (411)
Q Consensus 245 d~ 246 (411)
.-
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 272
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.23 E-value=0.0014 Score=58.76 Aligned_cols=227 Identities=9% Similarity=-0.081 Sum_probs=130.6
Q ss_pred EEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEE-EEe-ecC
Q 015198 58 CFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIG-EFA-FRS 134 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~-~~~-~~~ 134 (411)
+|+.+....|+..+++.........+ ..-.....+.|++ ++.++.+.... +.|..+++..+.... .+. .-.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~-----~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEE-EEEEEEEEEEEEGGGTEEEEEETTT-----TEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEccCeEEEEECCCCceEEEEEe-cCCCccEEEEEEeCCCEEEEEECCC-----CcEEEEEccCCCceEEEEcCCCC
Confidence 56666677888899886432222212 2334566777776 34555554444 899999977663211 222 234
Q ss_pred ceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec-CCCCeEEEEEcCCcce
Q 015198 135 DVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLNMI 209 (411)
Q Consensus 135 ~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~~~~ 209 (411)
....+++.+ .+.+.. ..+.|.++++........+..... ....++.++.+..|+.+- ...+.|...+.++...
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~--~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELD--QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS--SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCC--CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 566788875 444433 457899999764332222222222 234444554434444443 2356777777776555
Q ss_pred EEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEE
Q 015198 210 KLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHI 287 (411)
Q Consensus 210 ~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~v 287 (411)
..+. ..-...+.|++++++..|+.+. ..+. |..+|+.... ...+... .......+++.. +.++.+-...+.|..
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~-I~~~d~dG~~-~~~~~~~-~~~~P~glav~~-~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTN-RQAVVKG-SLPHPFALTLFE-DILYWTDWSTHSILA 233 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCS-CEEEECS-CCSCEEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCE-EEEEcCCCCc-eEEEecC-CCCCceEEEEeC-CEEEEEecCCCeEEE
Confidence 4443 2234567899999777666555 4566 9999986433 3333321 233566777753 345556556778999
Q ss_pred EEccccccC
Q 015198 288 FSLRVRVVG 296 (411)
Q Consensus 288 wd~~~~~~~ 296 (411)
++..+++..
T Consensus 234 ~~~~~G~~~ 242 (318)
T 3sov_A 234 CNKYTGEGL 242 (318)
T ss_dssp EETTTCCSC
T ss_pred EECCCCCce
Confidence 998877654
No 273
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.23 E-value=0.00094 Score=62.68 Aligned_cols=240 Identities=8% Similarity=-0.044 Sum_probs=135.2
Q ss_pred CCeEEEEEcCC--CCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC
Q 015198 45 IELISVSWNQD--YGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 45 ~~V~~l~~s~~--g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
.....|+|+|+ +..|.++. .+.|+.++..+... ... . ........+.+++++.++++..... .....+...+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v-~~~-~-~~~~~P~giavd~dG~lyVad~~~~-~~~~gv~~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYV-DIK-T-TNIGQCADVNFTLNGDMVVVDDQSS-DTNTGIYLFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEE-EEE-C-CCCSCEEEEEECTTCCEEEEECCSC-TTSEEEEEECG
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEE-EEe-e-cCCCCccEEEECCCCCEEEEcCCCC-cccceEEEEEC
Confidence 34578999995 45566666 68888888865332 222 2 3334466777787776555543210 00022333332
Q ss_pred CCCcE-EEEEeecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 122 HQSRC-IGEFAFRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 122 ~~~~~-~~~~~~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
..+.. ...+..-.....+++++ ++.+.+ .++.|+.+|..++.....+...........+++++++..|.++-...
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 22211 11222334456788998 777666 46789999988776633332221111223456666666555555566
Q ss_pred CeEEEEEcCC--cc---eEEEecc---------------ccceeEEEe---------cCCCCEEEEEcCCCeEEEEEECC
Q 015198 197 GQVRIEHFGL--NM---IKLINAH---------------DSHIACFTL---------TLDGLLLATASTRGTLIRIFNTV 247 (411)
Q Consensus 197 g~i~i~~~~~--~~---~~~~~~~---------------~~~i~~l~~---------sp~g~~l~s~s~dg~~I~vwd~~ 247 (411)
+.|+..+.+. .. ...+.+. -.....+++ .++|.++++-...+. |+.++.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~~- 372 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLTP- 372 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEECT-
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEECC-
Confidence 7787755442 11 1222221 112456888 777877777666777 999984
Q ss_pred CCceEEEEeCCCC----------------CcceEEEEeC-CCCCEEEEEeCCCcEEEEEcc
Q 015198 248 DGTRLQEVRRGVD----------------RAEIYSIALS-PNVQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 248 ~~~~~~~~~~~~~----------------~~~v~~l~~s-pdg~~l~s~s~dg~I~vwd~~ 291 (411)
+|.. .++.+... -.....|+++ ++|.++++=...+.|+.++++
T Consensus 373 ~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 6644 34432101 1236789999 666666665566778887764
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.00077 Score=63.23 Aligned_cols=239 Identities=8% Similarity=0.023 Sum_probs=131.8
Q ss_pred CCeEEEEEcC-CCCEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeE-EEEecCCCCCCCCCeEEEEEC
Q 015198 45 IELISVSWNQ-DYGCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 45 ~~V~~l~~s~-~g~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~ 121 (411)
.....|+++| ++..|.++. .+.|+.++.+..... .. . ........+.+++++. ++++..... .....+.+.+
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~-~-~~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~- 211 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TV-Y-SGLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILT- 211 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EE-E-CCCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEE-
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EE-e-cCCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEe-
Confidence 3457899998 466676666 678888888753322 22 1 2334466777777765 444433210 0002344444
Q ss_pred CCCcEE--EEEeecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC
Q 015198 122 HQSRCI--GEFAFRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ 195 (411)
Q Consensus 122 ~~~~~~--~~~~~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 195 (411)
..+... ..+........++++| ++.+++ .++.|+.++..++.......... ......+++++++.+|.++-..
T Consensus 212 ~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 212 RESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEETT
T ss_pred CCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEECC
Confidence 333222 3333344567788999 676665 46889999988765433332221 1234456666777755555556
Q ss_pred CCeEEEEEcCCc--c---eEEEecc------c---------ccee-EEEec--------CCCCEEEEEcCCCeEEEEEEC
Q 015198 196 RGQVRIEHFGLN--M---IKLINAH------D---------SHIA-CFTLT--------LDGLLLATASTRGTLIRIFNT 246 (411)
Q Consensus 196 dg~i~i~~~~~~--~---~~~~~~~------~---------~~i~-~l~~s--------p~g~~l~s~s~dg~~I~vwd~ 246 (411)
.+.|..++.++. . ...+.+. . .... .++.. ++|.++++=...+. |+.++
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~- 368 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT- 368 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-
Confidence 778887555432 1 2222221 0 0112 44443 34666665556677 99998
Q ss_pred CCCceEEEEeCC----CC--C---------cceEEEEeCCC-CCEEEEEeCCCcEEEEEcc
Q 015198 247 VDGTRLQEVRRG----VD--R---------AEIYSIALSPN-VQWLAVASDKGTVHIFSLR 291 (411)
Q Consensus 247 ~~~~~~~~~~~~----~~--~---------~~v~~l~~spd-g~~l~s~s~dg~I~vwd~~ 291 (411)
.+|+.......+ .. . .....|+++++ +.++++-...+.|+.++++
T Consensus 369 ~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 369 PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 466544333210 00 1 14789999995 5555555556678887764
No 275
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.17 E-value=0.0037 Score=56.23 Aligned_cols=233 Identities=12% Similarity=0.096 Sum_probs=122.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEee-c--CCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRD-L--KSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
...+.+|.|.+++..+++|..+.| |......+..... + ......+..+.+.++..+++ +. . +.|..-
T Consensus 35 ~~~~~~v~~~~~~~~~~~G~~g~i--~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~-g~-~-----g~i~~S- 104 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVGVNATL--METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIV-GE-P-----PIMLHT- 104 (327)
T ss_dssp SSCEEEEEESSSSCEEEEETTTEE--EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEE-EE-T-----TEEEEE-
T ss_pred CCcEEEEEECCCCcEEEEcCCCeE--EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEE-EC-C-----CeEEEE-
Confidence 457999999988888887767754 3333333333322 1 11244567777777544443 32 2 655442
Q ss_pred CCCCcEEEEEe----ecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 121 DHQSRCIGEFA----FRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 121 ~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
...|+.-.... +...+..+.+.+++.+++ .++.|+.- ...++.-...... ....+..+.+.+++.++++ +
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~-~~~~~~~~~~~~~~~~~~~-g- 180 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQE-AIGVMRNLNRSPSGEYVAV-S- 180 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECS-CCCCEEEEEECTTSCEEEE-E-
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecC-CCcceEEEEEcCCCcEEEE-E-
Confidence 23343322222 234567777766555555 34544321 1223322222221 1123455666666667654 4
Q ss_pred CCCeEEE-EEcCCcceEEE-eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCC--CCCcceEEEEeC
Q 015198 195 QRGQVRI-EHFGLNMIKLI-NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRG--VDRAEIYSIALS 270 (411)
Q Consensus 195 ~dg~i~i-~~~~~~~~~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~--~~~~~v~~l~~s 270 (411)
.+|.+.. ++..+..-..+ ......+..+.+.+++++++. +.+|. +++.+...|+.-..+... .....+..+.+.
T Consensus 181 ~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~ 258 (327)
T 2xbg_A 181 SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLAYR 258 (327)
T ss_dssp TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEEES
T ss_pred CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCce-EEEecCCCCCeeEeccCCcccCCcceEEEEec
Confidence 4566665 44323332222 234567888999999886654 45787 777743324432222221 022358899999
Q ss_pred CCCCEEEEEeCCCcEEEEEccccc
Q 015198 271 PNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 271 pdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
+++.+++++ .+|.| ++..+.|+
T Consensus 259 ~~~~~~~~g-~~g~i-~~S~DgG~ 280 (327)
T 2xbg_A 259 TPNEVWLAG-GAGAL-LCSQDGGQ 280 (327)
T ss_dssp SSSCEEEEE-STTCE-EEESSTTS
T ss_pred CCCEEEEEe-CCCeE-EEeCCCCc
Confidence 888766655 46666 34444443
No 276
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.15 E-value=0.0034 Score=55.28 Aligned_cols=229 Identities=15% Similarity=0.170 Sum_probs=144.9
Q ss_pred EEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEecc-CCeEEEEecCCCCCCCCCeEEEEECCC-CcE
Q 015198 49 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFR-CNILALVGAGDNSQYPPTKVIIWDDHQ-SRC 126 (411)
Q Consensus 49 ~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~d~~~~d~~i~vwd~~~-~~~ 126 (411)
+.-.+|..+.+|.=....++|+|+++..++....+ ...++-+.|- ++...+++. ..|..|++.. ..+
T Consensus 71 sAIMnP~~~ViALrag~~LQiFnletK~klks~~~---~e~VvfWkWis~~~L~lVT~--------taVyHWs~~~~s~P 139 (365)
T 2xzh_A 71 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQP 139 (365)
T ss_dssp EEEECSSSSEEEEEETTEEEEEETTTTEEEEEEEC---SSCEEEEEECSSSEEEEEES--------SEEEEEESSTTCCC
T ss_pred eeeeCCCccEEEEecCCeEEEechHHhhhhcceec---CCccEEEEecCCCeEEEEcC--------CcEEEEcccCCCCC
Confidence 34458888888877788999999998666655554 2355666664 566777774 8999999864 456
Q ss_pred EEEEe-e----cCceeEEEEcCCeEEEE----------EcCeEEEEEcCCceeeEEEeccCCCcceEEEccC--CC-ceE
Q 015198 127 IGEFA-F----RSDVRSVKLSRDRIVVV----------LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHH--SS-TSV 188 (411)
Q Consensus 127 ~~~~~-~----~~~i~~~~~~~~~~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~ 188 (411)
++.+. | ...|.....+++.++++ ..|.+.+|..+. +.-+.+++|... ...+... +. ..+
T Consensus 140 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~--F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 140 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAAS--FAQFKMEGNAEESTL 216 (365)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEE--EEEECCTTCSSCEEE
T ss_pred ceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeee--eEEEecCCCCCCceE
Confidence 66666 2 46777888899988877 257889999765 444566666532 2222222 11 123
Q ss_pred EEEe--cCCCCeEEEEEcCCc----c------eEEEec---cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEE
Q 015198 189 LACP--GLQRGQVRIEHFGLN----M------IKLINA---HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQ 253 (411)
Q Consensus 189 l~~~--g~~dg~i~i~~~~~~----~------~~~~~~---~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~ 253 (411)
++++ +...+.+.|-..... . +..+-. ..+---++..++.-..+..-+.-|. |++||+.++.++.
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~ 295 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIY 295 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEE
Confidence 3322 112256777443211 1 111111 1222346777777778888889999 9999999999998
Q ss_pred EEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 254 EVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 254 ~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.-+- ....|..-+-+.+..=++.....|.|.--.++..+
T Consensus 296 ~nrI--S~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 296 MNRI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEC--CSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred Eecc--CCCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 7766 44466555554444446666688877766666544
No 277
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.10 E-value=0.0011 Score=59.49 Aligned_cols=173 Identities=12% Similarity=0.161 Sum_probs=109.4
Q ss_pred CeEEEEECCCCcEEEEEeecCceeEEEEcCCeE-------E-EE---E--cCeEEEEEc--CCceeeEEEec-------c
Q 015198 114 TKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRI-------V-VV---L--EHKIYVYSF--VDLKLLHQIET-------L 171 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~-------~-~~---~--dg~i~iwd~--~~~~~~~~~~~-------~ 171 (411)
+-+.+||+ +|+.++.+.. +.++.+.+-|+-. + ++ . +++|.+|++ .+++ +..+.. .
T Consensus 50 ~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 50 SGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATA 126 (355)
T ss_dssp TEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECC
T ss_pred CCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCC
Confidence 89999998 9998888764 5677776666321 2 22 3 578999977 3333 444411 1
Q ss_pred CCCcceEEEccCC-CceEEEEecCCCCeEEEEEcC--------CcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEE
Q 015198 172 ANLRGLCCLSHHS-STSVLACPGLQRGQVRIEHFG--------LNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIR 242 (411)
Q Consensus 172 ~~~~~~~~~~~~~-~~~~l~~~g~~dg~i~i~~~~--------~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~ 242 (411)
.....-+|+..++ .+.+.++....+|.+..|... .+.++.+.. .+.+..+...+....|+.+-++.. |.
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~G-Iw 204 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEA-IW 204 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTE-EE
T ss_pred CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccce-EE
Confidence 0222335553233 333333445578888776552 244566554 356778888988889999999988 88
Q ss_pred EEECC-----CCceEEEEeCCCCCcceEEEEe--CCCCC-EEEEEe-CCCcEEEEEcc
Q 015198 243 IFNTV-----DGTRLQEVRRGVDRAEIYSIAL--SPNVQ-WLAVAS-DKGTVHIFSLR 291 (411)
Q Consensus 243 vwd~~-----~~~~~~~~~~~~~~~~v~~l~~--spdg~-~l~s~s-~dg~I~vwd~~ 291 (411)
.++.+ +++.+..+....-...+..|++ .++++ +|++++ .++++.|||.+
T Consensus 205 ~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 205 KFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88865 3445544433223346888888 45666 565555 67789999996
No 278
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0045 Score=62.44 Aligned_cols=228 Identities=7% Similarity=-0.104 Sum_probs=126.9
Q ss_pred EEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCC----cEEEEEe-
Q 015198 58 CFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQS----RCIGEFA- 131 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~----~~~~~~~- 131 (411)
+|+.+....|+..+++........ .....+..+.++. ++.++++.... +.|+.+++... .....+.
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~---~~~~~~~gl~~d~~~~~lY~sD~~~-----~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLI---PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEE---CSCSSEEEEEEETTTTEEEEEETTT-----TEEEEEEC--------CEEEECS
T ss_pred ccccccccceeEeeccCCcceeee---cCCCceEEEeecccCCeeEEeeccc-----eeEEEEeccCCCCCcceeEEEec
Confidence 555656667788777754332222 2333455666665 44455554444 88998887653 2222233
Q ss_pred ecCceeEEEEcCCe--EEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC-CCCeEEEEEcCC
Q 015198 132 FRSDVRSVKLSRDR--IVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL-QRGQVRIEHFGL 206 (411)
Q Consensus 132 ~~~~i~~~~~~~~~--~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~dg~i~i~~~~~ 206 (411)
.......|++.+.+ .+++ ..+.|.+.++........+..... ....++.++.+..|+.+-. ..+.|...+.++
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~--~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTC--CEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC--CcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 33556778888654 3333 467899999865443333332222 2344555544334444332 236787777777
Q ss_pred cceEEEec-cccceeEEEecCCCCEEEEEcC-CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc
Q 015198 207 NMIKLINA-HDSHIACFTLTLDGLLLATAST-RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 207 ~~~~~~~~-~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
.....+.. .-.....|++++.+..|+.+.. .+. |..+++........+.....-.....|++.. ++++++-...+.
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~-I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~ 624 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA 624 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc-EEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCE
Confidence 66655543 3356789999987776666654 456 9999985544433333211222445677643 234444445677
Q ss_pred EEEEEccccccCC
Q 015198 285 VHIFSLRVRVVGE 297 (411)
Q Consensus 285 I~vwd~~~~~~~~ 297 (411)
|...+..+|+...
T Consensus 625 I~~~dk~tG~~~~ 637 (791)
T 3m0c_C 625 IFSANRLTGSDVN 637 (791)
T ss_dssp EEEEETTTCCCCE
T ss_pred EEEEeCCCCcceE
Confidence 8888877776543
No 279
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.08 E-value=0.0024 Score=58.99 Aligned_cols=203 Identities=9% Similarity=-0.082 Sum_probs=113.5
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
..+..++|++.+..|.... .+.|..++.+................-+.+.+.....++ +.... +.|.+.++.
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~-~d~~~-----~~I~~~~~d 189 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW-TDSGT-----SRIEVANLD 189 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEE-EETTT-----TEEEECBTT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEE-EcCCC-----CeEEEEeCC
Confidence 4577899998766666555 788888888754322111110111122233333333444 43333 788888876
Q ss_pred CCcEEEEEe-ecCceeEEEEcCCe-EEEE---Ec-CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 123 QSRCIGEFA-FRSDVRSVKLSRDR-IVVV---LE-HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 123 ~~~~~~~~~-~~~~i~~~~~~~~~-~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
.......+. .-.....++++|.+ .+.+ .. +.|+.+++.............. ....+++++++..|..+-...
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~--~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF--WPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS--CEEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC--CeeeEEEeCCCCEEEEEECCC
Confidence 544333333 23567889999754 3333 23 6788888754332222222221 234455554444455555567
Q ss_pred CeEEEEEcCCcceEEEe-ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 197 GQVRIEHFGLNMIKLIN-AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
+.|...+.++.....+. ........|++ ..+.++++-...+. |..+|..+|+.+..+..
T Consensus 268 ~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~-V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 268 HVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS-INSANKFTGKNQEIIRN 327 (386)
T ss_dssp TEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE-EEEEETTTCCSCEEEEC
T ss_pred CEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCe-EEEEECCCCcceEEEcc
Confidence 78888777765544443 23344567777 34555566666677 88888777777666654
No 280
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.07 E-value=0.00036 Score=69.37 Aligned_cols=238 Identities=11% Similarity=0.007 Sum_probs=121.6
Q ss_pred EEEEcC-CCCEEEEEe-CC-----------cEEEEecCCCcceEEeecC-CCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 49 SVSWNQ-DYGCFAAGT-SC-----------GFRIYNCEPFKETFRRDLK-SGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 49 ~l~~s~-~g~~la~g~-dg-----------~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
++++.+ ++++++.|+ +. .+.+||..+........+. ..........+..++.+++.|+.+ +.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~----~~ 265 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND----AK 265 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS----TT
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC----CC
Confidence 566777 888888887 32 4778888765432211111 111122233444566666665532 16
Q ss_pred eEEEEECCCCcEEEEEe--ecCceeEEEEcCCeEEEEE----c-----CeEEEEEcCCceeeEEE----eccCCCcceEE
Q 015198 115 KVIIWDDHQSRCIGEFA--FRSDVRSVKLSRDRIVVVL----E-----HKIYVYSFVDLKLLHQI----ETLANLRGLCC 179 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~----d-----g~i~iwd~~~~~~~~~~----~~~~~~~~~~~ 179 (411)
.+.+||..+++....-. ....-.++...+++++++. + ..+.+||..+.+-...- .........
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~-- 343 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQ-- 343 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTT--
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccc--
Confidence 89999988775443222 1222234556667766662 2 46899999876533210 000000000
Q ss_pred EccCCCceEEEEecCCCCe---------EEEEEcCCcc-eEEEeccc---------cceeEEEec-CCCCEEEEEcCCC-
Q 015198 180 LSHHSSTSVLACPGLQRGQ---------VRIEHFGLNM-IKLINAHD---------SHIACFTLT-LDGLLLATASTRG- 238 (411)
Q Consensus 180 ~~~~~~~~~l~~~g~~dg~---------i~i~~~~~~~-~~~~~~~~---------~~i~~l~~s-p~g~~l~s~s~dg- 238 (411)
.....++..+++ |..+|. +..|+..... ......+. ..-.++.|. .++++++.|+.++
T Consensus 344 ~~~~~~~~iyv~-Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 344 GLYRSDNHAWLF-GWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp GGGTTTCSCCEE-ECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred ceeecCCceEEE-ECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 111122233333 333443 4445444322 11111111 122344443 4778888887542
Q ss_pred ----------eEEEEEECCCCceEEEEeCCCCCcc-eEEEEeCCCCCEEEEEeCC-----------CcEEEEEccccc
Q 015198 239 ----------TLIRIFNTVDGTRLQEVRRGVDRAE-IYSIALSPNVQWLAVASDK-----------GTVHIFSLRVRV 294 (411)
Q Consensus 239 ----------~~I~vwd~~~~~~~~~~~~~~~~~~-v~~l~~spdg~~l~s~s~d-----------g~I~vwd~~~~~ 294 (411)
. |.+||..+.+-............ -.+++..|++++++.|+.+ ..+.+||..+++
T Consensus 423 ~~~~~~~~~~~-v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 423 QDSDATTNAHI-ITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSBCCCCEEE-EECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCcCCcceE-EEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 5 88888877665433201112222 2344566899999998854 457888887654
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.06 E-value=0.0042 Score=56.42 Aligned_cols=203 Identities=9% Similarity=-0.068 Sum_probs=112.8
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
..+..++|++.+..|.... .+.|..++.+................-+++.+.....++ +.... +.|.+.++.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~-~d~~~-----~~I~~~~~d 146 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYW-TDSGT-----SRIEVANLD 146 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEE-EETTT-----TEEEEEETT
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEE-EcCCC-----CeEEEEcCC
Confidence 3468899998776666655 788888888764322211110111222333333334444 43333 789999976
Q ss_pred CCcEEEEEe-ecCceeEEEEcCC-eEEEE---Ec-CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 123 QSRCIGEFA-FRSDVRSVKLSRD-RIVVV---LE-HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 123 ~~~~~~~~~-~~~~i~~~~~~~~-~~~~~---~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
.......+. .-.....++++|. +.+.. .. +.|..+++... ....+.. ........+++++++..|..+-...
T Consensus 147 G~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~-~~~~~PnGla~d~~~~~lY~aD~~~ 224 (349)
T 3v64_C 147 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIAD-THLFWPNGLTIDYAGRRMYWVDAKH 224 (349)
T ss_dssp SCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEESCC-SSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC-CcEEEEE-CCCCCcceEEEeCCCCEEEEEECCC
Confidence 544333332 2356788999984 44444 23 77888887543 2222211 1112334555554444455555566
Q ss_pred CeEEEEEcCCcceEEEe-ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 197 GQVRIEHFGLNMIKLIN-AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~~-~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
+.|...+.++.....+. ........+++ .++.++++-...+. |..+|..+|+.+..+..
T Consensus 225 ~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~-V~~~~~~~G~~~~~i~~ 284 (349)
T 3v64_C 225 HVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKS-INSANKFTGKNQEIIRN 284 (349)
T ss_dssp TEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTE-EEEEETTTCCSCEEEEC
T ss_pred CEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCe-EEEEEccCCCccEEecc
Confidence 78888777775544432 33344567777 34555555555666 88888667766655553
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.04 E-value=0.00021 Score=72.20 Aligned_cols=245 Identities=11% Similarity=0.002 Sum_probs=125.5
Q ss_pred CCCCC-CeEEEEEc-CCCCEEEEEe--CC----cEEEEecCCC-cceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCC
Q 015198 41 DVDEI-ELISVSWN-QDYGCFAAGT--SC----GFRIYNCEPF-KETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQY 111 (411)
Q Consensus 41 ~~h~~-~V~~l~~s-~~g~~la~g~--dg----~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~ 111 (411)
.+|.- .+...+|| |||++||.+. +| .|+++|++++ +. +...+ ......+.|++++..|+....+...
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~---~~~~~~~~WspDg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKV---SGTNGEIVWGPDHTSLFYVTKDETL 244 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCE---EEECSCCEECSSTTEEEEEEECTTC
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCccc---cCceeeEEEecCCCEEEEEEECCCC
Confidence 34554 78899999 9999999766 33 3899999886 42 11111 1112356788886433332222111
Q ss_pred CCCeEEEEECCCCcE--EEEEe--ecCceeEEEEcCCeEEEE------EcCeEEEEEcCCce-ee--EEEec-cCCCcce
Q 015198 112 PPTKVIIWDDHQSRC--IGEFA--FRSDVRSVKLSRDRIVVV------LEHKIYVYSFVDLK-LL--HQIET-LANLRGL 177 (411)
Q Consensus 112 ~d~~i~vwd~~~~~~--~~~~~--~~~~i~~~~~~~~~~~~~------~dg~i~iwd~~~~~-~~--~~~~~-~~~~~~~ 177 (411)
....|.++++.+++. ...+. .......+.|+||+++++ ....|+++|+.+++ .. ..+.. .... .
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~--~ 322 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV--R 322 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC--C
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc--e
Confidence 114788889887642 23333 234456789999998877 24578999987652 12 22321 2221 1
Q ss_pred EEEccCCCceEEEEecCCC--C--eEEEEEcCC-cceEE-Eecccc--ceeEEEecCCCCEEEEEcCCCe-EEEEEEC--
Q 015198 178 CCLSHHSSTSVLACPGLQR--G--QVRIEHFGL-NMIKL-INAHDS--HIACFTLTLDGLLLATASTRGT-LIRIFNT-- 246 (411)
Q Consensus 178 ~~~~~~~~~~~l~~~g~~d--g--~i~i~~~~~-~~~~~-~~~~~~--~i~~l~~sp~g~~l~s~s~dg~-~I~vwd~-- 246 (411)
....+.. +..|++....+ + .|...+... ..... +..+.. .+..+.+. .+.++++...++. .|+++|+
T Consensus 323 ~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~ 400 (751)
T 2xe4_A 323 YDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADS 400 (751)
T ss_dssp EEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCT
T ss_pred EEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEeccc
Confidence 2222122 33343333333 3 444455442 23233 333433 34555554 2345556666664 2556675
Q ss_pred -----CCCceEEEEeCCCCCcceEEEEe----CCCCC-EEEEEeCC---CcEEEEEccccc
Q 015198 247 -----VDGTRLQEVRRGVDRAEIYSIAL----SPNVQ-WLAVASDK---GTVHIFSLRVRV 294 (411)
Q Consensus 247 -----~~~~~~~~~~~~~~~~~v~~l~~----spdg~-~l~s~s~d---g~I~vwd~~~~~ 294 (411)
..++....+... ....+..+.+ ++++. ++++.+.. ..++.+|+.+++
T Consensus 401 ~~~~~~~g~~~~~l~l~-~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 401 QDGVFKAGTGLREVVME-EPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTSCCCTTTCCEECCCC-CSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred ccccccCCccceEECCC-CceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 344413344321 1122344433 44655 44443333 357777777664
No 283
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.02 E-value=0.00089 Score=66.56 Aligned_cols=233 Identities=9% Similarity=-0.038 Sum_probs=119.0
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecC-CCCCCCCCeEEEEE
Q 015198 44 EIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAG-DNSQYPPTKVIIWD 120 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~d~~~~d~~i~vwd 120 (411)
.....++++..+++++++|+ +..+.+||..+........+...... ......+++.+++.|+ .+.......+.+||
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 33445678889999999998 56899999876443222222111111 2233334555555555 33111235799999
Q ss_pred CCCCcEEEEE----e-e-----------cCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEeccCC-------Cc
Q 015198 121 DHQSRCIGEF----A-F-----------RSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETLAN-------LR 175 (411)
Q Consensus 121 ~~~~~~~~~~----~-~-----------~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~-------~~ 175 (411)
..+++....- . . ...+..+.. .++..+. ....+..||..+.+.......... +.
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg-~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~ 399 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGW-KKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 399 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEEC-GGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEEC-CCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCC
Confidence 8887643320 0 0 011111111 1122222 245688899877654433322111 11
Q ss_pred ceEEEcc-CCCceEEEEecCCCC-----------eEEEEEcCCcceEEEe---ccccc-eeEEEecCCCCEEEEEcCC--
Q 015198 176 GLCCLSH-HSSTSVLACPGLQRG-----------QVRIEHFGLNMIKLIN---AHDSH-IACFTLTLDGLLLATASTR-- 237 (411)
Q Consensus 176 ~~~~~~~-~~~~~~l~~~g~~dg-----------~i~i~~~~~~~~~~~~---~~~~~-i~~l~~sp~g~~l~s~s~d-- 237 (411)
...++.+ ..+++++++.| .++ .|.+++.....-..+. .+... -.+++..|+|++++.|+.+
T Consensus 400 ~~~av~~~~~~~~i~v~GG-~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~ 478 (656)
T 1k3i_A 400 CGNAVMYDAVKGKILTFGG-SPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRG 478 (656)
T ss_dssp TCEEEEEETTTTEEEEECC-BSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBC
T ss_pred CCceEeccCCCCeEEEEeC-CCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccC
Confidence 1222221 22456666644 321 4445554443333332 12222 2345667899999998854
Q ss_pred ---------CeEEEEEECCCCceEEEEeC-CCCCcceEEEEeCCCCCEEEEEeC
Q 015198 238 ---------GTLIRIFNTVDGTRLQEVRR-GVDRAEIYSIALSPNVQWLAVASD 281 (411)
Q Consensus 238 ---------g~~I~vwd~~~~~~~~~~~~-~~~~~~v~~l~~spdg~~l~s~s~ 281 (411)
.. +.+||..+.+-.. +.. ...........+.+||++++.|+.
T Consensus 479 ~~~~~~~~~~~-v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 479 IPFEDSTPVFT-PEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CTTCCCSBCCC-CEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCcCCCCcccc-eEEEcCCCCceee-cCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45 8999987765332 211 111222334556799999999885
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=0.0033 Score=59.42 Aligned_cols=251 Identities=7% Similarity=-0.011 Sum_probs=132.9
Q ss_pred CeEEEEEcC-CCCEEEEEe--CCcEEEEecCCCcceEEeecCC-CCEEEEEEec-------cCCeE-EEEecCCCCC-CC
Q 015198 46 ELISVSWNQ-DYGCFAAGT--SCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLF-------RCNIL-ALVGAGDNSQ-YP 112 (411)
Q Consensus 46 ~V~~l~~s~-~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~-~l~s~~~d~~-~~ 112 (411)
....|+|.| ++..|.++. .+.|++.|.+............ .-.....+.| ++++. ++++...+.. ..
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 567999999 455555555 4667777877533222221101 1224666777 77665 4444332100 00
Q ss_pred CCeEEEEECCC-CcEE-----EEEeecCceeEEEEcC-CeEEEE---EcCeEEEEEcC-------Ccee-----------
Q 015198 113 PTKVIIWDDHQ-SRCI-----GEFAFRSDVRSVKLSR-DRIVVV---LEHKIYVYSFV-------DLKL----------- 164 (411)
Q Consensus 113 d~~i~vwd~~~-~~~~-----~~~~~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~-------~~~~----------- 164 (411)
...|.+.+... ++.. ..+..-.....++++| ++.+++ .++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred CceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 12366665333 2221 2232223445778899 455444 57889999987 5543
Q ss_pred eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc--ce---EEEecc---c------------ccee-EEE
Q 015198 165 LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN--MI---KLINAH---D------------SHIA-CFT 223 (411)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~--~~---~~~~~~---~------------~~i~-~l~ 223 (411)
...+...........+++++++..|.++-.....|+..+.++. .+ ..+.+. . .... .++
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 2222111111233456666677654444456677777444332 11 233221 0 1123 344
Q ss_pred ec-------CCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCC-------------CC---------cceEEEEeCCC-C
Q 015198 224 LT-------LDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGV-------------DR---------AEIYSIALSPN-V 273 (411)
Q Consensus 224 ~s-------p~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~-------------~~---------~~v~~l~~spd-g 273 (411)
.. ++|.++++=..... |+.++ .+|. +.++.+.. .. .....|+++++ |
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~r-Ir~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFC-VRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTE-EEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EccccccccCCCeEEEEECCCCE-EEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 44 45666666666777 99998 5664 44443210 01 24678999997 6
Q ss_pred CEEEEEeCCCcEEEEEccccccCCCC
Q 015198 274 QWLAVASDKGTVHIFSLRVRVVGEDS 299 (411)
Q Consensus 274 ~~l~s~s~dg~I~vwd~~~~~~~~~~ 299 (411)
.++++=.....|+.++++........
T Consensus 457 ~lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 457 MFYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp EEEEEETTTTEEEEEEECCCC-----
T ss_pred EEEEEeCCCCEEEEEECCCCcccccC
Confidence 66666666778999999877655433
No 285
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.99 E-value=0.01 Score=55.00 Aligned_cols=204 Identities=7% Similarity=-0.086 Sum_probs=115.4
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCc----ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 44 EIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFK----ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+..|+|++.+..|.... .+.|+.++++... .............-+++.+.....+++- ... +.|.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d-~~~-----~~I~ 184 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVL-----GTVS 184 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEE-TTT-----TEEE
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEE-CCC-----CeEE
Confidence 45678999998777666665 7888888876421 1111110112222333444344444443 333 8999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCC-eEEEEE----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRD-RIVVVL----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
+.++........+. .......|+++|. +.+... .+.|...++........+..... ....++.++++..|..
T Consensus 185 ~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~--~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 185 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ--WPNGITLDLLSGRLYW 262 (400)
T ss_dssp EECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCS--CEEEEEEETTTTEEEE
T ss_pred EEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCC--ceEEEEEEeCCCEEEE
Confidence 99977655444444 3445789999984 444442 36788888754333222222212 3344555544445555
Q ss_pred ecCCCCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 192 PGLQRGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
+-...+.|...+.++.....+... -.....+++. .+.++++-...+. |..+|..+|+.+..+..
T Consensus 263 aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 329 (400)
T 3p5b_L 263 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAE 329 (400)
T ss_dssp EETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCS-EEEEESSSCCCCEEEEC
T ss_pred EECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCe-EEEEEcCCCCceEEEec
Confidence 555667888877777655554321 2334566663 3445555556677 88899878877766664
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.99 E-value=0.0096 Score=58.57 Aligned_cols=227 Identities=7% Similarity=-0.082 Sum_probs=134.1
Q ss_pred CEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee-cC
Q 015198 57 GCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF-RS 134 (411)
Q Consensus 57 ~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~-~~ 134 (411)
.+|+.+..+.|+..++++........+ .+-.....+.|++ ++.++++.... +.|..+++........+.. ..
T Consensus 7 ~~Ll~s~~~~I~~i~l~~~~~~~~~~~-~~~~~~~~l~~d~~~~~lywtD~~~-----~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 7 AFLLFSRRADIRRISLETNNNNVAIPL-TGVKEASALDFDVTDNRIYWTDISL-----KTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CEEEEEETTEEEEEESSCTTCEEECCC-CSCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCS
T ss_pred cEEEEEeCCcEEEEECCCCCcceEEEc-CCCCceEEEEEECCCCEEEEEECCC-----CeEEEEECCCCCcEEEEeCCCC
Confidence 466666788899999986443332222 2233466777775 45555555444 8999999765544333432 24
Q ss_pred ceeEEEEcCC-eE-EEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec-CCCCeEEEEEcCCcce
Q 015198 135 DVRSVKLSRD-RI-VVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLNMI 209 (411)
Q Consensus 135 ~i~~~~~~~~-~~-~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~~~~ 209 (411)
....+++.+. +. +++ ..+.|.+.++........+..... ....++.+|....|..+- +..+.|...+.++...
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~--~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~ 158 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD--SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER 158 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCC--CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCC--CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce
Confidence 5677888754 33 333 457899999864332222222222 334555555333444432 2355677666777666
Q ss_pred EEEeccccceeEEEecCCCCEEEEEcC-CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEE
Q 015198 210 KLINAHDSHIACFTLTLDGLLLATAST-RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIF 288 (411)
Q Consensus 210 ~~~~~~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vw 288 (411)
..+...-.....|++++++..|+.+.. .+. |..+|+..... ..+.. .......|++.. +.++++-...+.|...
T Consensus 159 ~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~-I~~~d~dG~~~-~v~~~--~l~~P~glav~~-~~ly~tD~~~~~I~~~ 233 (628)
T 4a0p_A 159 TTLVPNVGRANGLTIDYAKRRLYWTDLDTNL-IESSNMLGLNR-EVIAD--DLPHPFGLTQYQ-DYIYWTDWSRRSIERA 233 (628)
T ss_dssp EEEECSCSSEEEEEEETTTTEEEEEETTTTE-EEEEETTSCSC-EEEEE--CCSCEEEEEEET-TEEEEEETTTTEEEEE
T ss_pred EEEECCCCCcceEEEccccCEEEEEECCCCE-EEEEcCCCCce-EEeec--cCCCceEEEEEC-CEEEEecCCCCEEEEE
Confidence 555545566789999998777666654 456 99999865444 33333 222456777765 4444455557778888
Q ss_pred EccccccC
Q 015198 289 SLRVRVVG 296 (411)
Q Consensus 289 d~~~~~~~ 296 (411)
|..+++..
T Consensus 234 dk~tg~~~ 241 (628)
T 4a0p_A 234 NKTSGQNR 241 (628)
T ss_dssp ETTTCCSC
T ss_pred ECCCCCce
Confidence 87776543
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.97 E-value=0.01 Score=54.35 Aligned_cols=231 Identities=16% Similarity=0.163 Sum_probs=146.6
Q ss_pred EEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEec-cCCeEEEEecCCCCCCCCCeEEEEECCC-CcE
Q 015198 49 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLF-RCNILALVGAGDNSQYPPTKVIIWDDHQ-SRC 126 (411)
Q Consensus 49 ~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~s~~~d~~~~d~~i~vwd~~~-~~~ 126 (411)
+.-.+|..+.+|.=....+.|+|+++..+.....+ .. .++-+.| +++...+++. ..|+.|++.. ..+
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~-~e--~VvfWkWis~~~l~lVT~--------taVyHWsi~~~s~P 138 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM-TD--DVTFWKWISLNTVALVTD--------NAVYHWSMEGESQP 138 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEEC-SS--CCCEEEEEETTEEEEECS--------SEEEEEESSSSCCC
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceec-CC--CceEEEecCCCeEEEEcC--------CeeEEecccCCCCc
Confidence 44567888888877789999999998666555554 22 3555555 4566777774 8999999864 356
Q ss_pred EEEEe-e----cCceeEEEEcCCeEEEE----------EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCce-EEE
Q 015198 127 IGEFA-F----RSDVRSVKLSRDRIVVV----------LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTS-VLA 190 (411)
Q Consensus 127 ~~~~~-~----~~~i~~~~~~~~~~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ 190 (411)
++.+. | ...|.....+++.++++ ..|.+.+|..+. +.-+.+++|........+.-++... +++
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEE
Confidence 66666 3 46777888899988887 257889999765 4445666665422222222222212 232
Q ss_pred Eec--CCCCeEEEEEcCCc----c---eEEEe------ccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEE
Q 015198 191 CPG--LQRGQVRIEHFGLN----M---IKLIN------AHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEV 255 (411)
Q Consensus 191 ~~g--~~dg~i~i~~~~~~----~---~~~~~------~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~ 255 (411)
++. ...+.+.|-..... . .+... ...+--.++..++.-..+..-+.-|. |++||+.++.++..-
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~-i~lyDleTgt~i~~n 296 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMN 296 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCce-EEEEecccceeeeee
Confidence 221 12367777443221 0 11111 11223346778888888888899999 999999999999877
Q ss_pred eCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 256 RRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 256 ~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
+- ....|..-+-.....=++.....|.|.--.++..+
T Consensus 297 rI--s~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 297 RI--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EC--CSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred cc--cCCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 65 44566655555555556666788877777666654
No 288
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.93 E-value=0.0079 Score=51.66 Aligned_cols=199 Identities=10% Similarity=0.109 Sum_probs=118.5
Q ss_pred ecCCCCEEEEEEeccCC-eEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee--cCceeEEEEcCCeEEEE---EcCeEE
Q 015198 82 DLKSGGFRIVEMLFRCN-ILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF--RSDVRSVKLSRDRIVVV---LEHKIY 155 (411)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~---~dg~i~ 155 (411)
.+.+-...+..+.++++ +.+++....+ +.|...|.. ++.++.+.. ......+++.+++.+++ .++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~-----~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKP-----AAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETT-----EEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCC-----CeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE
Confidence 34344456777888864 3444444444 899999987 888888874 36788999999988866 467899
Q ss_pred EEEcCCce---eeEEEecc----CCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC----cceEEEe-------cccc
Q 015198 156 VYSFVDLK---LLHQIETL----ANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL----NMIKLIN-------AHDS 217 (411)
Q Consensus 156 iwd~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~----~~~~~~~-------~~~~ 217 (411)
++++.... .+...... ......-.+++++++..|.++. ......|+..++ ..+..+. .+..
T Consensus 95 ~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~-E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 95 VISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFK-EKNPIEVYKVNGLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEE-ESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSS
T ss_pred EEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEE-CcCCceEEEEcccccCCceeeecchhhccccccC
Confidence 99885543 22333211 1112334555555553443333 222334433322 1222221 1234
Q ss_pred ceeEEEecCCCCE-EEEEcCCCeEEEEEECCCCceEEEEeCCCC-------CcceEEEEeCCCCCEEEEEeCCCcEEEEE
Q 015198 218 HIACFTLTLDGLL-LATASTRGTLIRIFNTVDGTRLQEVRRGVD-------RAEIYSIALSPNVQWLAVASDKGTVHIFS 289 (411)
Q Consensus 218 ~i~~l~~sp~g~~-l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~-------~~~v~~l~~spdg~~l~s~s~dg~I~vwd 289 (411)
.+..++++|.... ++....... +.++|. .|+.+..+.-... -...-.|+|.++|++ +..++-+.+++|.
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~-L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~l-yIvsE~n~~y~f~ 250 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRA-LQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNI-YIVSEPNRFYRFT 250 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTE-EEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCE-EEEETTTEEEEEE
T ss_pred CceeEEEcCCCCeEEEEECCCCe-EEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCE-EEEcCCceEEEEE
Confidence 5789999987654 455555555 999996 5766665553211 125689999999984 4457777666664
Q ss_pred c
Q 015198 290 L 290 (411)
Q Consensus 290 ~ 290 (411)
-
T Consensus 251 ~ 251 (255)
T 3qqz_A 251 P 251 (255)
T ss_dssp C
T ss_pred e
Confidence 3
No 289
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.90 E-value=0.012 Score=52.58 Aligned_cols=204 Identities=8% Similarity=-0.103 Sum_probs=113.6
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCC---cceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEE
Q 015198 44 EIELISVSWNQDYGCFAAGT--SCGFRIYNCEPF---KETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+..++|++++..|.... .+.|..++.+.. ...... +...-.....+++++ ++.++++.... +.|.
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~-~~~~~~~p~glavd~~~~~ly~~d~~~-----~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV-ISRDIQAPDGLAVDWIHSNIYWTDSVL-----GTVS 102 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE-ECSSCSCCCEEEEETTTTEEEEEETTT-----TEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE-EeCCCCCcCEEEEeecCCeEEEEECCC-----CEEE
Confidence 34578999999877666665 788888888751 111111 111111122333332 33344443333 8999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCC-eEEEE-E---cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRD-RIVVV-L---EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~-~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
+.++........+. .......++++|. +.++. . .+.|..+++. ++....+... .......++.++++..|..
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~-~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTE-NIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECS-SCSCEEEEEEETTTTEEEE
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEEC-CCCCceEEEEeccCCEEEE
Confidence 99976544333333 3356789999984 44444 2 2678888874 3333333211 1123445555544445555
Q ss_pred ecCCCCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 192 PGLQRGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
+-...+.|...+.++.....+... -.....+++. .+.++++-...+. |..+|..+|+.+..+..
T Consensus 181 ~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~-V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 181 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA-IFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCCCEEEEC
T ss_pred EECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe-EEEEeCCCCcceEEEec
Confidence 555677888877777655554321 2345677774 3555555556677 88888777776655543
No 290
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.78 E-value=0.0015 Score=68.44 Aligned_cols=221 Identities=12% Similarity=0.147 Sum_probs=144.2
Q ss_pred CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecCceeEEEEcC
Q 015198 64 SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSR 143 (411)
Q Consensus 64 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~ 143 (411)
...|.|.|+.......++.. ..-+..-+|...+++--.. .++.|+|+++.+.++.+.....|.--.|-.
T Consensus 47 ~~~vvIidl~~~~~~~rrpi-----~AdsAIMnP~~~iiALrag------~~lQiFnl~~k~klks~~~~e~VvfWkWis 115 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPI-----SADSAIMNPASKVIALKAG------KTLQIFNIEMKSKMKAHTMTDDVTFWKWIS 115 (1630)
T ss_pred CceEEEEECCCCCCcccccc-----cchhhccCCCcceEEEecC------CeEEEeehHHhhhhcccccCCCceEEEecC
Confidence 44788888887555443332 2222233454444444332 899999999999999998888888888865
Q ss_pred CeEEE-EEcCeEEEEEcCC-ceeeEEEeccC--CCcceEEEccCCCceEEEEecC------CCCeEEEEEcCCcceEEEe
Q 015198 144 DRIVV-VLEHKIYVYSFVD-LKLLHQIETLA--NLRGLCCLSHHSSTSVLACPGL------QRGQVRIEHFGLNMIKLIN 213 (411)
Q Consensus 144 ~~~~~-~~dg~i~iwd~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~------~dg~i~i~~~~~~~~~~~~ 213 (411)
+..+. +.+..|+.|++.. ..+.+.+..|. ....++.+..+++.++++..|- -.|.+.++....+..+.+.
T Consensus 116 ~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie 195 (1630)
T 1xi4_A 116 LNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE 195 (1630)
T ss_pred CCeeEEEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhh
Confidence 55444 4999999999963 24444443331 2346778888888888876652 4578888888888888889
Q ss_pred ccccceeEEEec--CC-CCEEEEEcC---CCeEEEEEECCCC---ceEE-----E--EeCCCCCcceEEEEeCCCCCEEE
Q 015198 214 AHDSHIACFTLT--LD-GLLLATAST---RGTLIRIFNTVDG---TRLQ-----E--VRRGVDRAEIYSIALSPNVQWLA 277 (411)
Q Consensus 214 ~~~~~i~~l~~s--p~-g~~l~s~s~---dg~~I~vwd~~~~---~~~~-----~--~~~~~~~~~v~~l~~spdg~~l~ 277 (411)
+|.+....+.+. +. ..+++.+.. .+. ++|-++... .... . +.......-..++..++.-..+.
T Consensus 196 gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~k-Lhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 196 GHAASFAQFKMEGNAEESTLFCFAVRGQAGGK-LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred HhHhhhheeccCCCCCCceEEEEEEecCCCce-EEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 998877665553 11 224433322 256 999988542 1110 0 11100122344677788777888
Q ss_pred EEeCCCcEEEEEccccccC
Q 015198 278 VASDKGTVHIFSLRVRVVG 296 (411)
Q Consensus 278 s~s~dg~I~vwd~~~~~~~ 296 (411)
..+.-|.|++||+.++.+.
T Consensus 275 ~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred EEecCceEEEEecccchhh
Confidence 8999999999999999875
No 291
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.69 E-value=0.00099 Score=67.32 Aligned_cols=198 Identities=9% Similarity=0.007 Sum_probs=106.3
Q ss_pred EEEEEecc-CCeEEEEecCCCCCCCCCeEEEEECCCC-cEEEEEeecCceeEEEEcCCeEEEE---Ec-----CeEEEEE
Q 015198 89 RIVEMLFR-CNILALVGAGDNSQYPPTKVIIWDDHQS-RCIGEFAFRSDVRSVKLSRDRIVVV---LE-----HKIYVYS 158 (411)
Q Consensus 89 ~~~~~~~~-~~~~~l~s~~~d~~~~d~~i~vwd~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~---~d-----g~i~iwd 158 (411)
.+..+.|+ |++..++-..+........|+++|+.++ +.+.. ........+.|+||++.++ .+ ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 66778899 9987665322110001147999999998 63211 0112245788999986665 33 3688899
Q ss_pred cCCcee--eEEEeccCCCcceEEEccCCCceEEEEecCC--CCeEEEEEcCCc--ce--EEE-eccccceeEEEecCCCC
Q 015198 159 FVDLKL--LHQIETLANLRGLCCLSHHSSTSVLACPGLQ--RGQVRIEHFGLN--MI--KLI-NAHDSHIACFTLTLDGL 229 (411)
Q Consensus 159 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--dg~i~i~~~~~~--~~--~~~-~~~~~~i~~l~~sp~g~ 229 (411)
+.+++. ...+..... .....+.+++++++|++.... ...|++.+.... .. ..+ .........+.|+..+.
T Consensus 254 lgt~~~~~~lv~~~~~~-~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNP-LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp TTSCGGGCEEEEECCCT-TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred CCCCchhcEEEEecCCC-ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 877642 223332222 234566777788877765432 334555555432 22 333 33344555666554444
Q ss_pred EEEEEcCC----CeEEEEEECCCCceEEE-EeCCCCCcceEEEEeCCCCCEEEEEeCCCc--EEEEEc
Q 015198 230 LLATASTR----GTLIRIFNTVDGTRLQE-VRRGVDRAEIYSIALSPNVQWLAVASDKGT--VHIFSL 290 (411)
Q Consensus 230 ~l~s~s~d----g~~I~vwd~~~~~~~~~-~~~~~~~~~v~~l~~spdg~~l~s~s~dg~--I~vwd~ 290 (411)
+++....+ .. |..+|+.++..... +..+.....+..+.+. .+.++++...++. |+++++
T Consensus 333 l~~~t~~~~a~~~~-L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 333 LVILTNEGGAVNHK-LLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEECTTTCTTCE-EEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEeCCCCCCCcE-EEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 44554443 25 77778765322222 2221122245666665 3345566677775 455554
No 292
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.69 E-value=0.026 Score=50.37 Aligned_cols=200 Identities=12% Similarity=-0.016 Sum_probs=113.0
Q ss_pred CeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcc---eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEE
Q 015198 46 ELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKE---TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWD 120 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd 120 (411)
.+..++|.+.+..|.... .+.|..++.+.... .....+ ....-+++.+.....+ ++.... +.|.+++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l--~~p~glavd~~~g~ly-~~d~~~-----~~I~~~~ 107 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGL--LSPDGLACDWLGEKLY-WTDSET-----NRIEVSN 107 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECC--SCCCEEEEETTTTEEE-EEETTT-----TEEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCC--CCccEEEEEcCCCeEE-EEECCC-----CEEEEEE
Confidence 467899998766666555 78888888875421 111111 1222233333333344 443333 8899999
Q ss_pred CCCCcEEEEEe-ecCceeEEEEcCC-eEEEE-E---cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecC
Q 015198 121 DHQSRCIGEFA-FRSDVRSVKLSRD-RIVVV-L---EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 121 ~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~-~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
+........+. .......++++|. +.+.. . .+.|+.+++.. +....+... .-.....+++++++..|..+-.
T Consensus 108 ~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~-~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 108 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINS-EIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS-CSCEEEECS-SCSCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC-CCeEEEEEC-CCCCccEEEEeccCCEEEEEEC
Confidence 76543332232 3456788999985 44443 2 36788888753 333333211 1123345555554445555555
Q ss_pred CCCeEEEEEcCCcceEEEec-cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 195 QRGQVRIEHFGLNMIKLINA-HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 195 ~dg~i~i~~~~~~~~~~~~~-~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
..+.|...+.++.....+.. .......+++. .+.++.+-...+. |..+|..+|+....+..
T Consensus 186 ~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~-V~~~~~~~G~~~~~i~~ 247 (318)
T 3sov_A 186 KLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHS-ILACNKYTGEGLREIHS 247 (318)
T ss_dssp TTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTE-EEEEETTTCCSCEEEEC
T ss_pred CCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCe-EEEEECCCCCceEEEeC
Confidence 67788887777755554432 33445667775 3345555555667 99999878877666654
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.0069 Score=56.69 Aligned_cols=152 Identities=7% Similarity=0.005 Sum_probs=93.0
Q ss_pred ceeEEEEcCC--eEEEEE--cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCC----eEEEEEcCC
Q 015198 135 DVRSVKLSRD--RIVVVL--EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRG----QVRIEHFGL 206 (411)
Q Consensus 135 ~i~~~~~~~~--~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg----~i~i~~~~~ 206 (411)
....++++|+ +.+.+. .+.|+.+|+..++...... .. .....+++++++..|+++...++ .+.+....+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~--~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GL--SKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CC--SCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CC--CCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 4568899973 554442 2789999987766544333 22 24566777777775555443222 233333333
Q ss_pred cce--EEEeccccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE-eCC
Q 015198 207 NMI--KLINAHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA-SDK 282 (411)
Q Consensus 207 ~~~--~~~~~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~d 282 (411)
... ..+.. ......++++| +|.++++-..++. |+.++...+......... .......|+|+|+|++|+.+ ...
T Consensus 215 ~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~-V~~~~~~~~~~~~~~~~~-~~~~P~gia~~pdG~~lyv~d~~~ 291 (430)
T 3tc9_A 215 GFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQ-VFRYDFTTQETTPLFTIQ-DSGWEFHIQFHPSGNYAYIVVVNQ 291 (430)
T ss_dssp TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTE-EEEEETTTTEEEEEEECS-SSSCCEEEEECTTSSEEEEEETTT
T ss_pred ceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCE-EEEEECCCCcEEEEEEcC-CCCcceeEEEcCCCCEEEEEECCC
Confidence 322 23322 33456788999 7777777667788 999998766543233321 22357899999999955544 456
Q ss_pred CcEEEEEccc
Q 015198 283 GTVHIFSLRV 292 (411)
Q Consensus 283 g~I~vwd~~~ 292 (411)
+.|..++.+.
T Consensus 292 ~~I~~~~~d~ 301 (430)
T 3tc9_A 292 HYILRSDYDW 301 (430)
T ss_dssp TEEEEEEEET
T ss_pred CEEEEEeCCc
Confidence 7899988764
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.68 E-value=0.047 Score=55.09 Aligned_cols=204 Identities=7% Similarity=-0.095 Sum_probs=111.5
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCc----ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 44 EIELISVSWNQDYGCFAAGT--SCGFRIYNCEPFK----ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
...+..|+|.+....|+... .+.|+.++++... .............-+++.|....++++- ... +.|.
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD-~~~-----~~I~ 496 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTD-SVL-----GTVS 496 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEE-TTT-----TEEE
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEe-cCC-----CeEE
Confidence 45577899998666666555 6778888876421 1111110112223344444444444444 333 8999
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCC-eEEEEE----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEE
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRD-RIVVVL----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLAC 191 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~-~~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 191 (411)
+.++........+. .......|+++|. +.+.+. .+.|...++........+..... ....++.++....|++
T Consensus 497 v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~--~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 497 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ--WPNGITLDLLSGRLYW 574 (791)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCS--CEEEEEEETTTTEEEE
T ss_pred EEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCC--CceEEEEecCCCeEEE
Confidence 99976554433333 3456789999986 444442 26788888864433333332222 3344454433334444
Q ss_pred ecCCCCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 192 PGLQRGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 192 ~g~~dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
+-...+.|...+.++.....+... -.....|++.. +.++++-...+. |...|..+|+.+..+..
T Consensus 575 aD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~-I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEA-IFSANRLTGSDVNLLAE 641 (791)
T ss_dssp EETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTE-EEEEETTTCCCCEEEEC
T ss_pred EeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCE-EEEEeCCCCcceEEeec
Confidence 444567788877777665555321 12334566632 234444445566 88888888876666643
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.60 E-value=0.012 Score=52.24 Aligned_cols=150 Identities=4% Similarity=0.033 Sum_probs=99.1
Q ss_pred EEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEeecC---------ceeEEEE---cCCeEEEE-E-------
Q 015198 92 EMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRS---------DVRSVKL---SRDRIVVV-L------- 150 (411)
Q Consensus 92 ~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~~~---------~i~~~~~---~~~~~~~~-~------- 150 (411)
+..|++ ++.++++.-.. +.|..||...+..... .... .+..+.+ .|++++++ .
T Consensus 17 ~~~wd~~~g~~~vs~l~~-----g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYK-----GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp CEEEETTTTEEEEEETTT-----TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred CccCcCCCCEEEEEeccC-----CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 455654 56667776555 9999999876654433 3221 4578999 68887776 2
Q ss_pred --------cCeEEEEEcC---CceeeEEEecc--C---------CCcceEEEccCCCceEEEEecCCC-CeEEEEEcCCc
Q 015198 151 --------EHKIYVYSFV---DLKLLHQIETL--A---------NLRGLCCLSHHSSTSVLACPGLQR-GQVRIEHFGLN 207 (411)
Q Consensus 151 --------dg~i~iwd~~---~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~l~~~g~~d-g~i~i~~~~~~ 207 (411)
+..|..||+. +++.+...... . .......+..+++|...+. ++.. +.|...+.+++
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt-~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVA-FALGMPAIARVSADGK 169 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEE-EEESSCEEEEECTTSC
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEe-CCCCCCeEEEEeCCCC
Confidence 4779999998 88887766532 1 1123556777777766553 4445 56666666665
Q ss_pred ceEEEecc------ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC
Q 015198 208 MIKLINAH------DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG 249 (411)
Q Consensus 208 ~~~~~~~~------~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~ 249 (411)
.+..+... ....+.|+++|+|.+|++....+. |..+|+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~-L~~fD~~~p 216 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRA-LTAFDVSKP 216 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSS-EEEEECSSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCe-EEEEcCCCC
Confidence 44433211 223679999999998888877898 999998743
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.53 E-value=0.00032 Score=70.10 Aligned_cols=229 Identities=7% Similarity=-0.104 Sum_probs=116.7
Q ss_pred EEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCC----CcEEEEEe-
Q 015198 58 CFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQ----SRCIGEFA- 131 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~----~~~~~~~~- 131 (411)
+|+....+.|+..++++...... + ........+.|++ ++.++++.... +.|+.+++.. ......+.
T Consensus 379 ~ll~~~~~~I~~id~~~~~~~~~--~-~~~~~p~gla~d~~~~~Ly~sD~~~-----~~I~~~~~~g~~~~~~~~~~i~~ 450 (699)
T 1n7d_A 379 YLFFTNRHEVRKMTLDRSEYTSL--I-PNLRNVVALDTEVASNRIYWSDLSQ-----RMICSTQLDRAHGVSSYDTVISR 450 (699)
T ss_dssp CBCCCCTTC-CEECTTSCCEECC--S-CCCTTCCCCEEETTTTEEEECCTTT-----TSBEEEESCCCCC-CCCCCBCCS
T ss_pred eEEecCccceEEEeCCCCcceee--e-ccCcceEEEccccccCeEEEEecCC-----CeEEEEecCCCCCCcceEEEEeC
Confidence 34444456677777765332111 1 1112234555664 34555554444 7888888765 12111111
Q ss_pred ecCceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC-CCeEEEEEcCC
Q 015198 132 FRSDVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ-RGQVRIEHFGL 206 (411)
Q Consensus 132 ~~~~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-dg~i~i~~~~~ 206 (411)
.......|++.+ .+.+++ ..+.|.++++........+..... ....++.++.+..|+.+... .+.|...+..+
T Consensus 451 ~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~--~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 451 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSC--CCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCC--CcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 112345677764 333333 467899999765433322222212 22233444433344443322 25676655555
Q ss_pred cceEEEe-ccccceeEEEecCCCCEEE-EEcCCCeEEEEEECCCCceEEEEeCC-CCCcceEEEEeCCCCCEEEEEeCCC
Q 015198 207 NMIKLIN-AHDSHIACFTLTLDGLLLA-TASTRGTLIRIFNTVDGTRLQEVRRG-VDRAEIYSIALSPNVQWLAVASDKG 283 (411)
Q Consensus 207 ~~~~~~~-~~~~~i~~l~~sp~g~~l~-s~s~dg~~I~vwd~~~~~~~~~~~~~-~~~~~v~~l~~spdg~~l~s~s~dg 283 (411)
.....+. ..-...+.|+|+|++..|+ +-...+. |.++|+.. .....+... ........|++..+ .++++....+
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~-I~~~d~dG-~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS-ISSIDVNG-GNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTE-EEEECSSS-SCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCe-EEEEccCC-CceEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 4444332 2233456899998765554 4445566 99999864 333334321 11123445566443 4455555667
Q ss_pred cEEEEEccccccCCCC
Q 015198 284 TVHIFSLRVRVVGEDS 299 (411)
Q Consensus 284 ~I~vwd~~~~~~~~~~ 299 (411)
.|..++..+++....+
T Consensus 606 ~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 606 AIFSANRLTGSDVNLL 621 (699)
T ss_dssp CEEEEETTTEEEEECC
T ss_pred eEEEEEccCCCceEEe
Confidence 8999998887765433
No 297
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.50 E-value=0.09 Score=51.67 Aligned_cols=201 Identities=8% Similarity=-0.082 Sum_probs=116.7
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECC
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDH 122 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~ 122 (411)
..+..|+|++.+..|..+. ++.|..++++................-+++.|.....+++- ... +.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD-~~~-----~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWAD-TGT-----NRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEE-TTT-----TEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEE-CCC-----CEEEEEecC
Confidence 4578999999877777666 78888888875332222211112223344444444444443 333 899999976
Q ss_pred CCcEEEEE-eecCceeEEEEcC-CeEEEEE----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 123 QSRCIGEF-AFRSDVRSVKLSR-DRIVVVL----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 123 ~~~~~~~~-~~~~~i~~~~~~~-~~~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
.......+ ..-.....++++| .+.+... .+.|...++..... ..+.... .....++.++++..|..+-...
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~--~~P~GlalD~~~~~LY~aD~~~ 187 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNV--GRANGLTIDYAKRRLYWTDLDT 187 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSC--SSEEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCC--CCcceEEEccccCEEEEEECCC
Confidence 54432223 2334568999997 4555442 45788888754433 2332222 2344555555444555555567
Q ss_pred CeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEe
Q 015198 197 GQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 197 g~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~ 256 (411)
+.|...+.++.....+...-.....+++.. +.++++-...+. |...|..+|+....+.
T Consensus 188 ~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~~ly~tD~~~~~-I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 188 NLIESSNMLGLNREVIADDLPHPFGLTQYQ-DYIYWTDWSRRS-IERANKTSGQNRTIIQ 245 (628)
T ss_dssp TEEEEEETTSCSCEEEEECCSCEEEEEEET-TEEEEEETTTTE-EEEEETTTCCSCEEEE
T ss_pred CEEEEEcCCCCceEEeeccCCCceEEEEEC-CEEEEecCCCCE-EEEEECCCCCceEEEe
Confidence 788887777655455544444456777764 444455445677 9999987776555544
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.40 E-value=0.0079 Score=56.35 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=88.3
Q ss_pred ceeEEEEcCC---eEEEEE--cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC---Ce-EEEEEcC
Q 015198 135 DVRSVKLSRD---RIVVVL--EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR---GQ-VRIEHFG 205 (411)
Q Consensus 135 ~i~~~~~~~~---~~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d---g~-i~i~~~~ 205 (411)
....++++|+ +.+.+. .+.|+.+|+.+++...... ... ....+++++++.+++ +.... .. +......
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~--~P~giavd~dG~lyV-ad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIG--QCADVNFTLNGDMVV-VDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCS--CEEEEEECTTCCEEE-EECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCC--CccEEEECCCCCEEE-EcCCCCcccceEEEEECC
Confidence 3568899984 666553 3789999987776654433 222 345566666666433 33211 11 2222222
Q ss_pred Ccce--EEEeccccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCceEEEE-eCCCCCcceEEEEeCCCCCEEEEE-e
Q 015198 206 LNMI--KLINAHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGTRLQEV-RRGVDRAEIYSIALSPNVQWLAVA-S 280 (411)
Q Consensus 206 ~~~~--~~~~~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~~~~~~-~~~~~~~~v~~l~~spdg~~l~s~-s 280 (411)
.... ..+. .-.....++++| +|.++++-..++. |+.+|..++.....+ ... .......|+|+|+|++|+.+ .
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~-~~~~~~~ia~dpdG~~LYvad~ 292 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMD-TKGSNFHIVWHPTGDWAYIIYN 292 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECS-CCSSCEEEEECTTSSEEEEEET
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccC-CCCCcccEEEeCCCCEEEEEeC
Confidence 2111 1222 233456788999 7776666666777 999998878763333 221 22234579999999965554 4
Q ss_pred CCCcEEEEEccc
Q 015198 281 DKGTVHIFSLRV 292 (411)
Q Consensus 281 ~dg~I~vwd~~~ 292 (411)
..+.|+.++++.
T Consensus 293 ~~~~I~~~~~d~ 304 (433)
T 4hw6_A 293 GKHCIYRVDYNR 304 (433)
T ss_dssp TTTEEEEEEBCT
T ss_pred CCCEEEEEeCCC
Confidence 567798888763
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.37 E-value=0.00076 Score=67.39 Aligned_cols=201 Identities=9% Similarity=-0.093 Sum_probs=108.7
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCcEEEEecCC----CcceEEeecCCCCEEEEEEecc-CCeEEEEecCCCCCCCCCeEE
Q 015198 45 IELISVSWNQDYGCFAAGT--SCGFRIYNCEP----FKETFRRDLKSGGFRIVEMLFR-CNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~--dg~i~iw~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~d~~~~d~~i~ 117 (411)
..+..|+|.+.+..|+... .+.|+.++++. ...... +.........+++. ..+.++++.... +.|.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~--i~~~~~~P~glavD~~~g~LY~tD~~~-----~~I~ 478 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSNIYWTDSVL-----GTVS 478 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCB--CCSCC--CCCEECCCSSSBCEECCTTT-----SCEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEE--EeCCCCCcceEEEEeeCCcEEEEeccC-----CeEE
Confidence 4567889998877777766 78899888874 111111 11111122334444 233444443333 8899
Q ss_pred EEECCCCcEEEEEe-ecCceeEEEEcCCe-EEEEE----cCeEEEEEcCCceeeEEEe-ccCCCcceEEEccCCCceEEE
Q 015198 118 IWDDHQSRCIGEFA-FRSDVRSVKLSRDR-IVVVL----EHKIYVYSFVDLKLLHQIE-TLANLRGLCCLSHHSSTSVLA 190 (411)
Q Consensus 118 vwd~~~~~~~~~~~-~~~~i~~~~~~~~~-~~~~~----dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~ 190 (411)
++++........+. .......++++|.+ .+++. .+.|+.+++.. .....+. ........+++.+.. ..|+
T Consensus 479 v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG-~~~~~l~~~~l~~PnGlavd~~~--~~LY 555 (699)
T 1n7d_A 479 VADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLS--GRLY 555 (699)
T ss_dssp EEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS-CCCCEESCSSCSSCCCEEECTTT--CCEE
T ss_pred EEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC-CCeeEEEeCCCCCccEEEEeccC--CEEE
Confidence 99976554333333 23456788898854 33332 26777777643 2222221 111111234444433 3344
Q ss_pred EecCCCCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 191 CPGLQRGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 191 ~~g~~dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
++-...+.|...+..+.....+... ......|++..+ .++++....+. |..+|..+|+.+..+..
T Consensus 556 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~-V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEA-IFSANRLTGSDVNLLAE 623 (699)
T ss_dssp EEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTC-EEEEETTTEEEEECCCT
T ss_pred EEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCe-EEEEEccCCCceEEeec
Confidence 4445667888877766554444321 123345555443 34455555677 99999888887766654
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.34 E-value=0.089 Score=51.63 Aligned_cols=228 Identities=9% Similarity=-0.072 Sum_probs=120.1
Q ss_pred CEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcE-EEEEee-c
Q 015198 57 GCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRC-IGEFAF-R 133 (411)
Q Consensus 57 ~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~-~~~~~~-~ 133 (411)
.+|+-+....|+..+++.......... ..-.....+.+++ ++.++++-... +.|..+++..... ...+.. -
T Consensus 10 ~~~~~~~~~~I~~i~~~~~~~~~~~~~-~~~~~~~~ld~~~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~~v~~~~~ 83 (619)
T 3s94_A 10 PLLLYANRRDLRLVDATNGKENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSE-----EAIKRTEFNKTESVQNVVVSGL 83 (619)
T ss_dssp CCEEEECSSBEEEECCC---------C-BCCSCEEEEEEETTTTEEEEEETTT-----TEEEEEEC-----CEEEECSSC
T ss_pred ceEEEeccccEEEEeCCCCcceEEEEE-cCCCceEEEEEEeCCCEEEEEECCC-----CeEEEEEccCCCceEEEEeCCC
Confidence 355666678888888875321121111 2333456666665 44555554443 8899999765532 222222 2
Q ss_pred CceeEEEEcCC-eEEEE---EcCeEEEEEcCCceeeEEEe-ccCCCcceEEEccCCCceEEEEec-CCCCeEEEEEcCCc
Q 015198 134 SDVRSVKLSRD-RIVVV---LEHKIYVYSFVDLKLLHQIE-TLANLRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLN 207 (411)
Q Consensus 134 ~~i~~~~~~~~-~~~~~---~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~~ 207 (411)
.....+++++. +.+.+ ..+.|.+.++.... ...+. ........+++.+ .+..|..+- ...+.|.....++.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~Iavdp--~~g~ly~tD~g~~~~I~r~~~dG~ 160 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDP--SSGFMYWTDWGEVPKIERAGMDGS 160 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCCEEEET--TTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCC-EEEEEeCCCCCCceEEEec--CCCeEEEeccCCCCEEEEEECCCC
Confidence 56788999874 44444 46889999986533 33332 2222223344444 323343332 22456666666665
Q ss_pred ceEEEe-ccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcE
Q 015198 208 MIKLIN-AHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTV 285 (411)
Q Consensus 208 ~~~~~~-~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I 285 (411)
....+. ..-.....|++++++..|+.+. ..+. |..+|+.... ...+... .......|++..+ .++++-...+.|
T Consensus 161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~-I~~~~~dG~~-~~~~~~~-~~~~P~gi~~~~~-~ly~td~~~~~V 236 (619)
T 3s94_A 161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF-IHKSNLDGTN-RQAVVKG-SLPHPFALTLFED-ILYWTDWSTHSI 236 (619)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC-EEEESSSCCE-EC----------CCCEEESSS-EEEEECTTTCSE
T ss_pred ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe-EEEecCCCCc-cEEEEeC-CCCCceEEEEeCC-EEEEecCCCCEE
Confidence 554443 2344568899998766666554 4556 9999985433 3223211 1112346677655 444444456789
Q ss_pred EEEEccccccCC
Q 015198 286 HIFSLRVRVVGE 297 (411)
Q Consensus 286 ~vwd~~~~~~~~ 297 (411)
...|..+++...
T Consensus 237 ~~~d~~tg~~~~ 248 (619)
T 3s94_A 237 LACNKYTGEGLR 248 (619)
T ss_dssp EEEESSSCCCCE
T ss_pred EEEECCCCcccE
Confidence 999988876543
No 301
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.29 E-value=0.18 Score=50.72 Aligned_cols=232 Identities=14% Similarity=0.122 Sum_probs=129.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
...|.++.-..+|. |-.|+...+..||-..... +...-......+.++....++.+.++.. .-+..||..+
T Consensus 21 ~n~V~~I~qD~~G~-lWigT~~GL~ryDG~~~~~-~~~~~~~~~~~i~~i~~d~~g~lWigT~-------~Gl~~yd~~~ 91 (758)
T 3ott_A 21 ASVVSCFLQDSEGL-IWIGSNKGLFSYDGYSTQQ-HFTYGENNNTRIYCGVIIDNTYLYMGTD-------NGILVYNYRA 91 (758)
T ss_dssp CCCEEEEEECTTSC-EEEEESSCEEEECSSCEEE-CSCTTSTTSSCEEEEEEETTTEEEEEET-------TEEEEEETTT
T ss_pred cceEEEEEECCCCC-EEEEECCCccccCCCceEE-EEccCCCCCceEEEEEEcCCCcEEEEeC-------CCeEEEeCCC
Confidence 46799999888885 4556644566677432111 1100011234466666666665555542 4578999776
Q ss_pred CcEEEEEe-ecCceeEEEEcCCeEEEEEcCeEEEEEcCCceeeEEEec---cCCCcceEEEccCCCceEEEEecCCCCeE
Q 015198 124 SRCIGEFA-FRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIET---LANLRGLCCLSHHSSTSVLACPGLQRGQV 199 (411)
Q Consensus 124 ~~~~~~~~-~~~~i~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~g~~dg~i 199 (411)
.+...... ....|.++.......+++..+.+..||..+++.. .+.. ......+.++..+.++.+.+.+ .+| +
T Consensus 92 ~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt--~~G-l 167 (758)
T 3ott_A 92 DRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGT--YNG-L 167 (758)
T ss_dssp TEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEE--TTE-E
T ss_pred CEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEe--CCC-H
Confidence 64322111 2335677765544444556668999998765543 3311 1111245666677677666543 344 4
Q ss_pred EEEEcCCcceEEEecc------ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCC
Q 015198 200 RIEHFGLNMIKLINAH------DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNV 273 (411)
Q Consensus 200 ~i~~~~~~~~~~~~~~------~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg 273 (411)
..++........+... ...|.++...+++..|..|+. +. +..+|..+++.. .+... ....|.++....+|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G-l~~~~~~~~~~~-~~~~l-~~~~i~~i~~d~~g 243 (758)
T 3ott_A 168 CRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY-LFQYFPSTGQIK-QTEAF-HNNSIKSLALDGNG 243 (758)
T ss_dssp EEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE-EEEEETTTTEEE-EEEEE-EEEEEEEEEECTTC
T ss_pred hhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CC-CeEEcCCCCeEE-eccCC-CCCeEEEEEEcCCC
Confidence 4444443333332211 224788888777776555664 56 889998776543 22210 23368888888888
Q ss_pred CEEEEEeCCCcEEEEEccccc
Q 015198 274 QWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 274 ~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.+.+ |+.+| +.+++..+++
T Consensus 244 ~lWi-gT~~G-l~~~~~~~~~ 262 (758)
T 3ott_A 244 DLLA-GTDNG-LYVYHNDTTP 262 (758)
T ss_dssp CEEE-EETTE-EEEECCTTSC
T ss_pred CEEE-EeCCc-eeEEecCCCc
Confidence 7554 45555 8888876543
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.26 E-value=0.035 Score=49.72 Aligned_cols=190 Identities=8% Similarity=-0.060 Sum_probs=104.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEEC--
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD-- 121 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~-- 121 (411)
.+.+..+.+.+++..++++.++. ||...................+..+.+.+++.+++.+... +..+-+|-
T Consensus 121 ~~~~~~i~~~~~~~~~~~~~~g~--v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G-----~~~~S~d~gG 193 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMITNVGA--IYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRG-----SFYSTWEPGQ 193 (327)
T ss_dssp SSCEEEEEEEETTEEEEEETTCC--EEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTS-----SEEEEECTTC
T ss_pred CCCeEEEEEECCCCEEEEeCCcc--EEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCC-----cEEEEeCCCC
Confidence 34578888887787777766664 3333333333433222334456777888877777766542 44444442
Q ss_pred CCCcEEEEEeecCceeEEEEcCCeEEEE--EcCeEEEEEcCCceeeEEEecc--CCCcceEEEccCCCceEEEEecCCCC
Q 015198 122 HQSRCIGEFAFRSDVRSVKLSRDRIVVV--LEHKIYVYSFVDLKLLHQIETL--ANLRGLCCLSHHSSTSVLACPGLQRG 197 (411)
Q Consensus 122 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~g~~dg 197 (411)
.+.+.+ .......+..+.+.+++.+++ .+|.+++.+...++.-..+... ........+.+.+++.++++ | .+|
T Consensus 194 ~tW~~~-~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~-g-~~g 270 (327)
T 2xbg_A 194 TAWEPH-NRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLA-G-GAG 270 (327)
T ss_dssp SSCEEE-ECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEE-E-STT
T ss_pred CceeEC-CCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEE-e-CCC
Confidence 222222 112456788888988887666 5677777643324332222211 11123455556556666654 4 467
Q ss_pred eEEEEEcCCcceEEEec---cccceeEEEecCCCCEEEEEcCCCeEEEEEE
Q 015198 198 QVRIEHFGLNMIKLINA---HDSHIACFTLTLDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 198 ~i~i~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd 245 (411)
.|..-...++.-..+.. ....+..+.|.+++. +++++.+|. |.-++
T Consensus 271 ~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~-i~~~~ 319 (327)
T 2xbg_A 271 ALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGI-LLRYV 319 (327)
T ss_dssp CEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTE-EEEEC
T ss_pred eEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCce-EEEEc
Confidence 77543222333333321 245678898875554 666677888 77665
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.25 E-value=0.02 Score=50.76 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=100.2
Q ss_pred ceeEEEEcC-CeEEEE---EcCeEEEEEcCCceeeEE-Eec----cCCCcceEEEcc---CCCceEEEEec---------
Q 015198 135 DVRSVKLSR-DRIVVV---LEHKIYVYSFVDLKLLHQ-IET----LANLRGLCCLSH---HSSTSVLACPG--------- 193 (411)
Q Consensus 135 ~i~~~~~~~-~~~~~~---~dg~i~iwd~~~~~~~~~-~~~----~~~~~~~~~~~~---~~~~~~l~~~g--------- 193 (411)
--.++.|++ ++.+.+ ..+.|..||...+..... +.. .........+.+ ++++.++++.-
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 345678876 455555 579999999875544333 111 111223467777 67777776522
Q ss_pred ---CCCCeEEEEEcC----CcceEEEe--ccc-----------cceeEEEecCCCCEEEEEcCC-CeEEEEEECCCCceE
Q 015198 194 ---LQRGQVRIEHFG----LNMIKLIN--AHD-----------SHIACFTLTLDGLLLATASTR-GTLIRIFNTVDGTRL 252 (411)
Q Consensus 194 ---~~dg~i~i~~~~----~~~~~~~~--~~~-----------~~i~~l~~sp~g~~l~s~s~d-g~~I~vwd~~~~~~~ 252 (411)
+.+..|..++.. ++.+.... ... .....++..++|+..++++.. +. |...+. .|+.+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~-I~rV~p-dG~~~ 171 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA-IARVSA-DGKTV 171 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE-EEEECT-TSCCE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe-EEEEeC-CCCEE
Confidence 014556666665 55555443 111 247899999999999988888 88 888875 44443
Q ss_pred EEEeCC----CCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccc
Q 015198 253 QEVRRG----VDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRV 292 (411)
Q Consensus 253 ~~~~~~----~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~ 292 (411)
..+... ......+.|+++|+|+.|++....|.|..+|+.+
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 333211 0122467999999999998887799999999884
No 304
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.20 E-value=0.31 Score=51.40 Aligned_cols=234 Identities=12% Similarity=0.045 Sum_probs=120.7
Q ss_pred CCCeEEEEEcCC------CCEEEEEe--CCcEEEEecCCCcceEEeecCCC-CEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 44 EIELISVSWNQD------YGCFAAGT--SCGFRIYNCEPFKETFRRDLKSG-GFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 44 ~~~V~~l~~s~~------g~~la~g~--dg~i~iw~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
...|.|+++.|. ++++++|. |++++|+++.+.+......+... ....+.+.......++..+-.| |
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d-----G 627 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD-----G 627 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT-----S
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC-----C
Confidence 457999999864 36899998 89999999998776665555221 1112222222344555555554 7
Q ss_pred eEEEEE--CCCCcEEEEE--e-ecCceeEEEEcCCe--EEEE-EcCeEEEEEcCCceeeEEEeccCCCc-ceEEEccC--
Q 015198 115 KVIIWD--DHQSRCIGEF--A-FRSDVRSVKLSRDR--IVVV-LEHKIYVYSFVDLKLLHQIETLANLR-GLCCLSHH-- 183 (411)
Q Consensus 115 ~i~vwd--~~~~~~~~~~--~-~~~~i~~~~~~~~~--~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~-- 183 (411)
.+.-+. ..+|+....- . ...++.-..+...+ ..++ .+....+|.-+ ++.... ......+ ..+.|...
T Consensus 628 ~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~ 705 (1158)
T 3ei3_A 628 ALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGY 705 (1158)
T ss_dssp EEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSS
T ss_pred eEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccC
Confidence 775444 4455544332 1 23344333333222 2222 45555555432 222211 1111111 33344332
Q ss_pred CCceEEEEecCCCCeEEEEEcC---CcceEEEeccccceeEEEecCCCCEEEEEcC------------------------
Q 015198 184 SSTSVLACPGLQRGQVRIEHFG---LNMIKLINAHDSHIACFTLTLDGLLLATAST------------------------ 236 (411)
Q Consensus 184 ~~~~~l~~~g~~dg~i~i~~~~---~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~------------------------ 236 (411)
+++ ++++ .++.++|-... .-.++.+. -...+..++++|+.+.++.+..
T Consensus 706 ~~g-~v~~---~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 780 (1158)
T 3ei3_A 706 PDS-LALA---NNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALS 780 (1158)
T ss_dssp TTE-EEEE---CSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSE
T ss_pred CCc-EEEE---cCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhh
Confidence 333 3333 24557773332 11222222 2345667777776664433221
Q ss_pred -------------------------CCeEEEEEECCCCceEEEEeCCCCCcceEEEE---eCCC-CCEEEEEe-------
Q 015198 237 -------------------------RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIA---LSPN-VQWLAVAS------- 280 (411)
Q Consensus 237 -------------------------dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~---~spd-g~~l~s~s------- 280 (411)
-+. |++.|-.+.+.+..+.-... ..+.+++ |..+ ..+|++|+
T Consensus 781 ~~~~~~~~~~~~~~~~~~~~g~~~~~s~-i~lidp~t~~~i~~~~l~~n-E~~~sv~~v~~~~~~~~~lvVGTa~~~~~e 858 (1158)
T 3ei3_A 781 SSVSSSKLFSSSTAPHETSFGEEVEVHN-LLIIDQHTFEVLHAHQFLQN-EYALSLVSCKLGKDPNTYFIVGTAMVYPEE 858 (1158)
T ss_dssp EEECCCCCC----------CCCEEEEEE-EEEEETTTCCEEEEEECCTT-EEEEEEEEECCTTCCCCEEEEEEEECCTTC
T ss_pred hcccccccccccccCchhhcCCceeeEE-EEEEeCCCCeEEEEEeCCCC-cceEEEEEEEEccCCCEEEEEEeeecCCCC
Confidence 123 78888888887777665322 3344443 4333 46888877
Q ss_pred ---CCCcEEEEEcc
Q 015198 281 ---DKGTVHIFSLR 291 (411)
Q Consensus 281 ---~dg~I~vwd~~ 291 (411)
..|.|++|++.
T Consensus 859 ~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 859 AEPKQGRIVVFQYS 872 (1158)
T ss_dssp SSCCCEEEEEEEEE
T ss_pred CCCCceEEEEEEEE
Confidence 34679999887
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.09 E-value=0.036 Score=52.39 Aligned_cols=153 Identities=11% Similarity=0.102 Sum_probs=88.3
Q ss_pred eeEEEEcCC--eEEEE-E--cCeEEEEEcCCceeeEEEeccC-CCcceEEEcc-------CCCceEEEEecCCCC----e
Q 015198 136 VRSVKLSRD--RIVVV-L--EHKIYVYSFVDLKLLHQIETLA-NLRGLCCLSH-------HSSTSVLACPGLQRG----Q 198 (411)
Q Consensus 136 i~~~~~~~~--~~~~~-~--dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~l~~~g~~dg----~ 198 (411)
...|+|+|. +.+++ . .+.|++.|+.+++....+.... .......+++ ++++..|+++...++ .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 457899983 43433 3 3578889988776665554322 1123455666 666665555443331 2
Q ss_pred --EEEEEcCC--cce-----EEEeccccceeEEEecC-CCCEEEEEcCCCeEEEEEECC-------CCce----------
Q 015198 199 --VRIEHFGL--NMI-----KLINAHDSHIACFTLTL-DGLLLATASTRGTLIRIFNTV-------DGTR---------- 251 (411)
Q Consensus 199 --i~i~~~~~--~~~-----~~~~~~~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~-------~~~~---------- 251 (411)
|.+.+... ... ..+... .....++++| ++.++++-..++. |..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeeccccccccc
Confidence 33332222 211 233222 2345778899 4556666667788 9999987 5543
Q ss_pred -EEE-EeCCCCCcceEEEEeCCCCCEEEEE-eCCCcEEEEEcc
Q 015198 252 -LQE-VRRGVDRAEIYSIALSPNVQWLAVA-SDKGTVHIFSLR 291 (411)
Q Consensus 252 -~~~-~~~~~~~~~v~~l~~spdg~~l~s~-s~dg~I~vwd~~ 291 (411)
... +... .......|+|+|+|++|+.+ +....|+.++.+
T Consensus 299 ~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 299 TFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 222 2221 23456899999999965554 455678886654
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.99 E-value=0.19 Score=45.37 Aligned_cols=227 Identities=10% Similarity=0.041 Sum_probs=113.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeec---CCCCEEEEEEeccCC----eEEEEecCCCCCCCCCeE
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDL---KSGGFRIVEMLFRCN----ILALVGAGDNSQYPPTKV 116 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~l~s~~~d~~~~d~~i 116 (411)
-..-..++|.|+|+++++-..+.|.+++ +. .......+ .........+.++++ +.++++.........+.|
T Consensus 30 l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g-~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIAERPGRIRLFR-EG-RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp CSCEEEEEECTTSCEEEEETTTEEEEEE-TT-EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCCceEEEEcCCCeEEEEeCCCeEEEEE-CC-CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 3456799999999866554489998888 32 22111111 123445677888887 444444321100001467
Q ss_pred EEEECCCCcE-----EE-EEee----cCceeEEEEcCCeEEEEEc----------------CeEEEEEcCCc--------
Q 015198 117 IIWDDHQSRC-----IG-EFAF----RSDVRSVKLSRDRIVVVLE----------------HKIYVYSFVDL-------- 162 (411)
Q Consensus 117 ~vwd~~~~~~-----~~-~~~~----~~~i~~~~~~~~~~~~~~d----------------g~i~iwd~~~~-------- 162 (411)
..++...+.. +. .+.. ......+.|.|||.+.+.+ +.|.-++....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 7777654321 11 1221 1234689999999776632 35555554320
Q ss_pred ----eeeEEE-eccCCCcceEEEccCC-CceEEEEecCCCC-------eEEEEEcCC-----------------cceEEE
Q 015198 163 ----KLLHQI-ETLANLRGLCCLSHHS-STSVLACPGLQRG-------QVRIEHFGL-----------------NMIKLI 212 (411)
Q Consensus 163 ----~~~~~~-~~~~~~~~~~~~~~~~-~~~~l~~~g~~dg-------~i~i~~~~~-----------------~~~~~~ 212 (411)
.....+ .++.+ ...+++++ ++.++++-...+. .|.+-.... .++..+
T Consensus 188 ~~~~~~~~i~a~G~rn---p~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 188 GRRGARPEVYSLGHRN---PQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TCTTSCTTEEEECCSE---ECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCccEEEEcCCC---cccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec
Confidence 011111 11221 22344454 3444433222222 122211111 111222
Q ss_pred eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce------EEEEeCCCCCcceEEEEeCCCCCEEEEEe
Q 015198 213 NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR------LQEVRRGVDRAEIYSIALSPNVQWLAVAS 280 (411)
Q Consensus 213 ~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~------~~~~~~~~~~~~v~~l~~spdg~~l~s~s 280 (411)
.+......++| .+|.++++.-..+. |...++..... ...+.. ....+..+++.|||.++++..
T Consensus 265 -~~~~ap~G~~~-~~G~l~v~~~~~~~-v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 -PQGFPPGNLAF-FRGDLYVAGLRGQA-LLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TTCCCEEEEEE-ETTEEEEEETTTTE-EEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCCcceEE-ECCEEEEEECCCCE-EEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEe
Confidence 12233456777 56766666656666 88777654331 122222 234789999999998766654
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.92 E-value=0.068 Score=48.99 Aligned_cols=139 Identities=14% Similarity=0.166 Sum_probs=88.4
Q ss_pred EEEEEcCeEEEEEcCCceeeEEEeccC--CCcceEEEccCCCceEEEEecCCCCeEEEEEcC-C---c---------ceE
Q 015198 146 IVVVLEHKIYVYSFVDLKLLHQIETLA--NLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG-L---N---------MIK 210 (411)
Q Consensus 146 ~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~-~---~---------~~~ 210 (411)
.+++.++.||.-++......+.+.... ....+..+..+++|.+||..| +..|.|-... + . ..+
T Consensus 35 i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ 112 (452)
T 3pbp_A 35 IVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDVSIQDAFQIF 112 (452)
T ss_dssp EEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCHHHHHTTEEE
T ss_pred EEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--CCeEEEEEecCccccCccccccccccee
Confidence 334488999998887555555665542 111345566777788999876 4466662222 1 0 112
Q ss_pred EEec------cccceeEEEecCCC---CEEEEEcCCCeEEEEEECCCCc--eEEEEeC-------CCCCcceEEEEeCCC
Q 015198 211 LINA------HDSHIACFTLTLDG---LLLATASTRGTLIRIFNTVDGT--RLQEVRR-------GVDRAEIYSIALSPN 272 (411)
Q Consensus 211 ~~~~------~~~~i~~l~~sp~g---~~l~s~s~dg~~I~vwd~~~~~--~~~~~~~-------~~~~~~v~~l~~spd 272 (411)
.+.- ...+|..+.|+|-+ ..|++-..|+. |++||+.... +. .+.. ......|.+++|..+
T Consensus 113 ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~ 190 (452)
T 3pbp_A 113 HYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKD 190 (452)
T ss_dssp EEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTT
T ss_pred EEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCC
Confidence 2322 25679999999954 58999999999 9999997532 22 3321 112257889999998
Q ss_pred CCEEEEEe--CCCcEEEE
Q 015198 273 VQWLAVAS--DKGTVHIF 288 (411)
Q Consensus 273 g~~l~s~s--~dg~I~vw 288 (411)
+-.|...+ ..|.|+-.
T Consensus 191 ~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 191 GLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SSCEEEEECTTSCEEEEE
T ss_pred CcEEEEEecCCCCCEEEE
Confidence 88777755 77766543
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.91 E-value=0.37 Score=47.25 Aligned_cols=224 Identities=7% Similarity=-0.046 Sum_probs=123.0
Q ss_pred EEEEEeCCcEEEEecCCCcce-EEeecCCCCEEEEEEeccC-CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe-ecC
Q 015198 58 CFAAGTSCGFRIYNCEPFKET-FRRDLKSGGFRIVEMLFRC-NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-FRS 134 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-~~~ 134 (411)
+|+.+..+.|+..+++..... ....+ ..-.....+.|++ ++.++++.... +.|+.+++........+. .-.
T Consensus 319 ~Ll~~~~~~i~~i~l~~~~~~~~~~~~-~~l~~~~~ld~d~~~~~ly~sD~~~-----~~I~r~~~~g~~~~~v~~~~~~ 392 (619)
T 3s94_A 319 LLLLARRTDLRRISLDTPDFTDIVLQL-EDIRHAIAIDYDPVEGYIYWTDDEV-----RAIRRSFIDGSGSQFVVTAQIA 392 (619)
T ss_dssp EEEEEESSCEEEEESSSTTCCCEECCC-SCCSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCS
T ss_pred EEEEEcccceEEEecCCCccceeEEec-cccCccEEEEEEcCCCeEEEEeCCC-----CeEEEEEcCCCccEEEEECCCC
Confidence 566666677887777754321 11212 2223466777876 45555554444 889999976544333333 234
Q ss_pred ceeEEEEcC-CeE-EEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec-CCCCeEEEEEcCCcce
Q 015198 135 DVRSVKLSR-DRI-VVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG-LQRGQVRIEHFGLNMI 209 (411)
Q Consensus 135 ~i~~~~~~~-~~~-~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~dg~i~i~~~~~~~~ 209 (411)
....+++.. .+. +++ ..+.|.+.++... ....+... .-.....++.++....|..+- +....|.....++...
T Consensus 393 ~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~-~~~~l~~~-~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~ 470 (619)
T 3s94_A 393 HPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT-MRKILISE-DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR 470 (619)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECT-TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CcCceEEecccCcEEEEeCCCCcEEEEeCCCC-eEEEEEEC-CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc
Confidence 667888875 333 333 4578999987643 33333221 112344555555433344432 2235666656666554
Q ss_pred EEEe-ccccceeEEEecCCCCEEEEEcC-CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE-eCCCcEE
Q 015198 210 KLIN-AHDSHIACFTLTLDGLLLATAST-RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA-SDKGTVH 286 (411)
Q Consensus 210 ~~~~-~~~~~i~~l~~sp~g~~l~s~s~-dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~dg~I~ 286 (411)
..+. ..-...+.|++++++..|+.+.. .+. |..+++.... ...+... .-.....|+...+ +|+.+ ...+.|.
T Consensus 471 ~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~-I~~~~~dG~~-~~~~~~~-~l~~P~glav~~~--~ly~tD~~~~~I~ 545 (619)
T 3s94_A 471 VVLVNTSLGWPNGLALDYDEGKIYWGDAKTDK-IEVMNTDGTG-RRVLVED-KIPHIFGFTLLGD--YVYWTDWQRRSIE 545 (619)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTE-EEEEESSSCC-CEEEEEC-CCCSSCCEEEETT--EEEEECTTSSCEE
T ss_pred EEEEeCCCCCCeeeEEcccCCEEEEEECCCCE-EEEEecCCCc-eEEEecc-CCCCcEEEEEECC--EEEEeecCCCeEE
Confidence 4443 23456788999987776766654 456 9999985433 3333211 1112345565433 44444 3456688
Q ss_pred EEEccccc
Q 015198 287 IFSLRVRV 294 (411)
Q Consensus 287 vwd~~~~~ 294 (411)
..+..+++
T Consensus 546 ~~~k~~g~ 553 (619)
T 3s94_A 546 RVHKRSAE 553 (619)
T ss_dssp EEESSSCC
T ss_pred EEEcCCCc
Confidence 77777763
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.83 E-value=0.26 Score=44.45 Aligned_cols=183 Identities=14% Similarity=0.131 Sum_probs=97.8
Q ss_pred EeccCCeEEEEecCC-CCC------CCCCeEEEEECCCC-cEEEEEeec--------CceeEEEEcC--Ce--EEEE---
Q 015198 93 MLFRCNILALVGAGD-NSQ------YPPTKVIIWDDHQS-RCIGEFAFR--------SDVRSVKLSR--DR--IVVV--- 149 (411)
Q Consensus 93 ~~~~~~~~~l~s~~~-d~~------~~d~~i~vwd~~~~-~~~~~~~~~--------~~i~~~~~~~--~~--~~~~--- 149 (411)
+...+++.++++++. .|. ..+|.|.++|..+. .....+... -....+.+.+ ++ .+++
T Consensus 55 i~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh 134 (355)
T 3sre_A 55 LEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNH 134 (355)
T ss_dssp EEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEEC
T ss_pred eEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEEC
Confidence 334567777776531 100 03499999998742 122333321 2556677654 33 2333
Q ss_pred --EcCeEEEEEcCCc-e---eeEEEeccCCCcceEEEccCCCceEEEEecC----------------CCCeEEEEEcCCc
Q 015198 150 --LEHKIYVYSFVDL-K---LLHQIETLANLRGLCCLSHHSSTSVLACPGL----------------QRGQVRIEHFGLN 207 (411)
Q Consensus 150 --~dg~i~iwd~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~----------------~dg~i~i~~~~~~ 207 (411)
.+..|.+|++... + .+..+... .....-.+..++++.+.+.... ..|.|+-++. .
T Consensus 135 ~~~~s~ielf~~d~~~~~~~~~~~~~g~-~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~ 211 (355)
T 3sre_A 135 PGSSSTVEVFKFQEEEKSLLHLKTIRHK-LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N 211 (355)
T ss_dssp STTCCEEEEEEEETTTTEEEEEEEECCT-TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T
T ss_pred CCCCCeEEEEEEECCCCEEEEEeccccC-CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C
Confidence 2567788777432 2 22333322 1123344555556665543210 1133333332 2
Q ss_pred ceEEEeccccceeEEEecCCCCEEEEEc-CCCeEEEEEECCC-Cce--EEEEeCCCCCcceEEEEeCC-CCCEEEEEeCC
Q 015198 208 MIKLINAHDSHIACFTLTLDGLLLATAS-TRGTLIRIFNTVD-GTR--LQEVRRGVDRAEIYSIALSP-NVQWLAVASDK 282 (411)
Q Consensus 208 ~~~~~~~~~~~i~~l~~sp~g~~l~s~s-~dg~~I~vwd~~~-~~~--~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~d 282 (411)
.+..+...-..-+.++|+||++.|+.+. ..+. |+.|++.. ++. ...+. .....-.+++.+ +|++.+++..+
T Consensus 212 ~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~-I~~~~~~~~g~l~~~~~~~---~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 212 DVRVVAEGFDFANGINISPDGKYVYIAELLAHK-IHVYEKHANWTLTPLRVLS---FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSCEEEEEEEE---CSSEEEEEEECTTTCCEEEEEESC
T ss_pred eEEEeecCCcccCcceECCCCCEEEEEeCCCCe-EEEEEECCCCcEecCEEEe---CCCCCceEEEeCCCCcEEEEecCC
Confidence 3333333344568899999998777665 4566 99999863 332 22332 345678889998 58877766544
No 310
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.81 E-value=0.031 Score=50.07 Aligned_cols=109 Identities=11% Similarity=0.105 Sum_probs=67.6
Q ss_pred CEEEEEe-CCcEEEEecCCCcceEEeecCCCCEEEEEEe---ccCCeEEEEec-CCCCCCCCCeEEEEECCCCcEEEEEe
Q 015198 57 GCFAAGT-SCGFRIYNCEPFKETFRRDLKSGGFRIVEML---FRCNILALVGA-GDNSQYPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 57 ~~la~g~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~s~-~~d~~~~d~~i~vwd~~~~~~~~~~~ 131 (411)
.++++++ ||.|.-+|.++++..+..... .....+... ...++..++.. ..| |.|..++..+|.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~d-----G~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGD-----GNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTT-----TEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCC-----CEEEEEECCCCcEEeeec
Confidence 3566777 999998898887777776542 111122111 11133344433 455 999999998886665555
Q ss_pred ecCceeE--EEE------------cCCeEEEE--EcCeEEEEEcCCceeeEEEecc
Q 015198 132 FRSDVRS--VKL------------SRDRIVVV--LEHKIYVYSFVDLKLLHQIETL 171 (411)
Q Consensus 132 ~~~~i~~--~~~------------~~~~~~~~--~dg~i~iwd~~~~~~~~~~~~~ 171 (411)
....+.. +.. +.++.+++ .++.++..|+.+|+.+..+...
T Consensus 85 ~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 85 IRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 2221110 121 25666666 8999999999999999988643
No 311
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.74 E-value=0.063 Score=56.70 Aligned_cols=230 Identities=14% Similarity=0.140 Sum_probs=131.7
Q ss_pred EEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEecc-CCeEEEEecCCCCCCCCCeEEEEECCC-CcEE
Q 015198 50 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFR-CNILALVGAGDNSQYPPTKVIIWDDHQ-SRCI 127 (411)
Q Consensus 50 l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~d~~~~d~~i~vwd~~~-~~~~ 127 (411)
.-.+|..+.+|.=...++.|+|+++..+.....+ ...++-+.|- ++...+++. ..|..|++.. ..++
T Consensus 71 AIMnP~~~iiALrag~~lQiFnl~~k~klks~~~---~e~VvfWkWis~~~l~lVT~--------~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 71 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTM---TDDVTFWKWISLNTVALVTD--------NAVYHWSMEGESQPV 139 (1630)
T ss_pred hccCCCcceEEEecCCeEEEeehHHhhhhccccc---CCCceEEEecCCCeeEEEcC--------CeEEEeccCCCCccH
Confidence 3456777777766688999999998665544443 3346666664 566677774 7899999864 2344
Q ss_pred EEEe-e----cCceeEEEEcCCeEEEE----------EcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc-eEEEE
Q 015198 128 GEFA-F----RSDVRSVKLSRDRIVVV----------LEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST-SVLAC 191 (411)
Q Consensus 128 ~~~~-~----~~~i~~~~~~~~~~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 191 (411)
+.+. | ...|..-..+++.++++ ..|.+.+|..+. +.-+.+.+|........+.-.+.. .++++
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-~~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-ccchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 4443 2 56677778888888877 257888998754 333445555443222222211111 12222
Q ss_pred ec--CCCCeEEEEEcCCc----c------eEEEec---cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEe
Q 015198 192 PG--LQRGQVRIEHFGLN----M------IKLINA---HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 192 ~g--~~dg~i~i~~~~~~----~------~~~~~~---~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~ 256 (411)
+. ...+.+.|-..... . +..+.. ...-..++..++.-..+..-+.-|. |.+||+.+|.++..-+
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~-~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce-EEEEecccchhhhhcc
Confidence 11 12256666333211 1 111111 1222335677777777888888999 9999999998876544
Q ss_pred CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 257 RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 257 ~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
- ....|...+-.....=++.....|.|.--.++..+
T Consensus 298 i--s~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 298 I--SGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred c--cCCceEEeccCCCCCceEEEcCCceEEEEEEccch
Confidence 3 33344444434332334444566666655555544
No 312
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.58 E-value=0.27 Score=45.13 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=68.2
Q ss_pred CCCeEEEEEcC-CcceEEEecc----ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc------------eEEEEeC
Q 015198 195 QRGQVRIEHFG-LNMIKLINAH----DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT------------RLQEVRR 257 (411)
Q Consensus 195 ~dg~i~i~~~~-~~~~~~~~~~----~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~------------~~~~~~~ 257 (411)
.++.||.-... ....+.+... -..|..+..+|+|++||..+.. . |.|-.+..+. ..+.+.-
T Consensus 39 ~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~-V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 39 QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-E-IFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-E-EEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-e-EEEEEecCccccCcccccccccceeEEEc
Confidence 35778874433 4445555543 2368889999999999998755 5 8898887331 1223332
Q ss_pred CC----CCcceEEEEeCCC---CCEEEEEeCCCcEEEEEcccc
Q 015198 258 GV----DRAEIYSIALSPN---VQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 258 ~~----~~~~v~~l~~spd---g~~l~s~s~dg~I~vwd~~~~ 293 (411)
+. ...+|..+.|+|- +..|++-..|+.|++||+...
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 11 2457999999994 458999999999999999983
No 313
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.50 E-value=0.27 Score=43.99 Aligned_cols=150 Identities=20% Similarity=0.288 Sum_probs=90.4
Q ss_pred eEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCC----CC---EEEEEcC---CCeEEEEEECC--CCceEEE
Q 015198 187 SVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLD----GL---LLATAST---RGTLIRIFNTV--DGTRLQE 254 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~----g~---~l~s~s~---dg~~I~vwd~~--~~~~~~~ 254 (411)
..++.+ ...+-+.+++.+++.++.+.. +.++.+.+-|+ |+ ++++... ++. |.+|++. +++ +..
T Consensus 41 s~ii~t-~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~-l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 41 SKLITT-NKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNT-IEIYAIDGKNGT-LQS 115 (355)
T ss_dssp CEEEEE-ETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCE-EEEEEECTTTCC-EEE
T ss_pred cEEEEE-cCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCe-EEEEEECCCCCc-eee
Confidence 344433 356789999999999888764 55666666553 22 2333333 466 9999773 443 444
Q ss_pred EeCC-----CCCcceEEEEe--CCC-CC-EEEEEeCCCcEEEEEccccccCCCCCCCCCCCCcccccccCCCCCccccCC
Q 015198 255 VRRG-----VDRAEIYSIAL--SPN-VQ-WLAVASDKGTVHIFSLRVRVVGEDSSSSLSTPSQSTELLNHSSSFDTLISP 325 (411)
Q Consensus 255 ~~~~-----~~~~~v~~l~~--spd-g~-~l~s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (411)
+... .....+..+++ +|. ++ ++++...+|.+..|++.......
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~---------------------------- 167 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY---------------------------- 167 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC----------------------------
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc----------------------------
Confidence 4221 11145677887 774 44 67888889999999996543221
Q ss_pred CCCCCCCCcccccccccCcccccccceEEEEeCCCceEEEEEcc-CCEEEEEEeCCcEEEEEEecCC
Q 015198 326 STGANPGSSLSFMRGVLPKYFSSEWSFAQFHIPEVTHFIAAFGS-QNTVVIVSMDGSFYRCSFDPVH 391 (411)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dg~~~~~~~~~~~ 391 (411)
-..+.+.+|+++..... |+..+ .++|+++-++--|+.|..+++.
T Consensus 168 ---------------------~~~~lVR~f~lgsq~Eg-cvvDd~~g~Lyv~eEd~GIw~~da~p~~ 212 (355)
T 3amr_A 168 ---------------------ISGKKVRAFKMNSQTEG-MAADDEYGRLYIAEEDEAIWKFSAEPDG 212 (355)
T ss_dssp ---------------------EEEEEEEEEECSSCEEE-EEEETTTTEEEEEETTTEEEEEECSTTS
T ss_pred ---------------------ccceEEEEecCCCCcce-EEEcCCCCeEEEecccceEEEEeCCcCC
Confidence 00122457888875554 45554 4888888888544444443544
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.48 E-value=1.1 Score=47.24 Aligned_cols=167 Identities=9% Similarity=0.044 Sum_probs=99.4
Q ss_pred CCCeEEEEECCCCcEEEE--EeecCceeEEEEcCCeEEEE-EcCeEEEEEcCCceeeEEEec-cCCCcceEEEccCCCce
Q 015198 112 PPTKVIIWDDHQSRCIGE--FAFRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKLLHQIET-LANLRGLCCLSHHSSTS 187 (411)
Q Consensus 112 ~d~~i~vwd~~~~~~~~~--~~~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 187 (411)
..|.|.++++..++.... ...++.+++++--.. ++++ ...+|++|++...+.++ ... ....+....+...+ .
T Consensus 862 ~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g-~Lla~ig~~l~vy~l~~~~~L~-~~~~~~~~i~~~~l~~~~--~ 937 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNG-KLLASINSTVRLYEWTTEKELR-TECNHYNNIMALYLKTKG--D 937 (1158)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEESSCEEEEEEETT-EEEEEETTEEEEEEECTTSCEE-EEEEECCCSCEEEEEEET--T
T ss_pred CceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCC-EEEEEcCCEEEEEECCCCceEE-EEeeccccEEEEEEeccC--C
Confidence 458999999875543322 236889999986554 5555 89999999997665444 211 11112233343322 3
Q ss_pred EEEEecCCCCeEEE--EEcCCcceEEEec--cccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC-------ce---EE
Q 015198 188 VLACPGLQRGQVRI--EHFGLNMIKLINA--HDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG-------TR---LQ 253 (411)
Q Consensus 188 ~l~~~g~~dg~i~i--~~~~~~~~~~~~~--~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~-------~~---~~ 253 (411)
++++ |..-..|.+ |......+..+.. +...++++.|-.++ .++.+..+|+ |.++..... +. ..
T Consensus 938 ~I~v-gD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~gN-l~vl~~~~~~~~~~~~~~L~~~~ 1014 (1158)
T 3ei3_A 938 FILV-GDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAFN-LFVCQKDSAATTDEERQHLQEVG 1014 (1158)
T ss_dssp EEEE-EESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTSE-EEEEEECTTCCSTTGGGBEEEEE
T ss_pred EEEE-EEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCCc-EEEEecCCCCCCccccceeeeEE
Confidence 4544 444445555 6555555555543 45667888876554 6777899999 998876431 22 22
Q ss_pred EEeCCCCCcceEEEE---eCCC---------CCEEEEEeCCCcEEEE
Q 015198 254 EVRRGVDRAEIYSIA---LSPN---------VQWLAVASDKGTVHIF 288 (411)
Q Consensus 254 ~~~~~~~~~~v~~l~---~spd---------g~~l~s~s~dg~I~vw 288 (411)
.|.. ...|+++. +.+. ...++.++.+|.|.+.
T Consensus 1015 ~fhl---G~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l 1058 (1158)
T 3ei3_A 1015 LFHL---GEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLV 1058 (1158)
T ss_dssp EEEC---SSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEE
T ss_pred EEeC---CCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEE
Confidence 3332 23566665 3332 2347788899988866
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.40 E-value=0.52 Score=42.49 Aligned_cols=202 Identities=8% Similarity=0.078 Sum_probs=104.7
Q ss_pred CeEEEEEcCCCCEEEEE-------------eCCcEEEEecCCC-cceEEeecCC-----CCEEEEEEeccC----CeEEE
Q 015198 46 ELISVSWNQDYGCFAAG-------------TSCGFRIYNCEPF-KETFRRDLKS-----GGFRIVEMLFRC----NILAL 102 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g-------------~dg~i~iw~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~----~~~~l 102 (411)
..-.+.+.|+|..++++ .+|.|.++|.++. .......+.+ .......+.+.. ...++
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34566678888776665 3788999998732 1222222212 122333333322 22344
Q ss_pred EecCCCCCCCCCeEEEEECCCC-cEE---EEEee--cCceeEEEEcCCeEEEE-Ec-------------------CeEEE
Q 015198 103 VGAGDNSQYPPTKVIIWDDHQS-RCI---GEFAF--RSDVRSVKLSRDRIVVV-LE-------------------HKIYV 156 (411)
Q Consensus 103 ~s~~~d~~~~d~~i~vwd~~~~-~~~---~~~~~--~~~i~~~~~~~~~~~~~-~d-------------------g~i~i 156 (411)
+..... ....|.+|++..+ ... ..+.+ -...+.+.+.++|.+.+ .+ +.|+.
T Consensus 131 Vvnh~~---~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 131 VVNHPG---SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEECST---TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEECCC---CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEE
Confidence 442221 1277888775543 222 22222 24578899999988765 21 34555
Q ss_pred EEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC--cc--eEEEeccccceeEEEecC-CCCEE
Q 015198 157 YSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL--NM--IKLINAHDSHIACFTLTL-DGLLL 231 (411)
Q Consensus 157 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~~--~~~~~~~~~~i~~l~~sp-~g~~l 231 (411)
+|. ++.......- . ....++++++++.|.++-+..+.|..++... .. .+.+ ...+..-.+++.+ +|++.
T Consensus 208 ~d~--~~~~~~~~~l-~--~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 208 YSP--NDVRVVAEGF-D--FANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp ECT--TCCEEEEEEE-S--SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEE
T ss_pred EEC--CeEEEeecCC-c--ccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEE
Confidence 554 3322222221 1 2334555666666666555678888866542 21 2233 2245667889999 59877
Q ss_pred EEEcCCCeEEEEEECC--CCceEEEEe
Q 015198 232 ATASTRGTLIRIFNTV--DGTRLQEVR 256 (411)
Q Consensus 232 ~s~s~dg~~I~vwd~~--~~~~~~~~~ 256 (411)
+++..++..|..|+.. .+..+..+.
T Consensus 282 va~~~~g~~v~~~~P~~~~~s~v~rI~ 308 (355)
T 3sre_A 282 VGCHPNGMRIFFYDAENPPGSEVLRIQ 308 (355)
T ss_dssp EEEESCHHHHHSCCTTSCCCEEEEEEE
T ss_pred EEecCCceEEEEECCCCCCCCEEEEEE
Confidence 7665443214444433 244444444
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.36 E-value=0.55 Score=42.40 Aligned_cols=229 Identities=11% Similarity=0.013 Sum_probs=116.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeec---CCCCEEEEEEeccCC----eEEEEecCC--CCCCCCC
Q 015198 44 EIELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDL---KSGGFRIVEMLFRCN----ILALVGAGD--NSQYPPT 114 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~l~s~~~--d~~~~d~ 114 (411)
-.....++|.|+|+++++-.++.|++++.+. . .....+ .........+.++|+ +.++++... .......
T Consensus 28 l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G-~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVTERPGRLVLISPSG-K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEEETTTEEEEECSSC-E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCC-c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3457899999999865554489998887432 2 111111 123345677888876 555554321 0000003
Q ss_pred eEEEEECCCC--c-----EE-EEEe--ecCceeEEEEcCCeEEEEEc----------------CeEEEEEcCCcee----
Q 015198 115 KVIIWDDHQS--R-----CI-GEFA--FRSDVRSVKLSRDRIVVVLE----------------HKIYVYSFVDLKL---- 164 (411)
Q Consensus 115 ~i~vwd~~~~--~-----~~-~~~~--~~~~i~~~~~~~~~~~~~~d----------------g~i~iwd~~~~~~---- 164 (411)
.|..|+...+ . .+ ..+. .......+.|.||+.+.+.. +.|.-++.. ++.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCC
Confidence 5666765543 1 11 1122 11234679999999877621 355555543 220
Q ss_pred ----eEEE-eccCCCcceEEEccCC-CceEEEEecCCCC--eEEEEEcCC-----------------cceEEEeccccce
Q 015198 165 ----LHQI-ETLANLRGLCCLSHHS-STSVLACPGLQRG--QVRIEHFGL-----------------NMIKLINAHDSHI 219 (411)
Q Consensus 165 ----~~~~-~~~~~~~~~~~~~~~~-~~~~l~~~g~~dg--~i~i~~~~~-----------------~~~~~~~~~~~~i 219 (411)
...+ .++.+ ...+++++ ++.++++-...+. .|.+-.... .++..+.......
T Consensus 185 pf~~~~i~a~G~rn---p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap 261 (354)
T 3a9g_A 185 PFPNSPIWSYGHRN---PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAP 261 (354)
T ss_dssp SSTTCCEEEECCSC---CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCE
T ss_pred CCCCCcEEEEccCC---cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCC
Confidence 1111 22222 22344555 3444433222222 122211100 1112221122346
Q ss_pred eEEEec-------CCCCEEEEEcCCCeEEEEEECCCC-ceE--EEEeCCCCCcceEEEEeCCCCCEEEEEe
Q 015198 220 ACFTLT-------LDGLLLATASTRGTLIRIFNTVDG-TRL--QEVRRGVDRAEIYSIALSPNVQWLAVAS 280 (411)
Q Consensus 220 ~~l~~s-------p~g~~l~s~s~dg~~I~vwd~~~~-~~~--~~~~~~~~~~~v~~l~~spdg~~l~s~s 280 (411)
..++|. .+|.++++.-..+. |...++... +.. ..+... ....+..+++.|||.++++..
T Consensus 262 ~G~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 262 SGASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSCEEEEEC
T ss_pred cceEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCcEEEEEe
Confidence 678883 56777776666677 888888753 332 233221 235789999999998666654
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.20 E-value=1.2 Score=44.72 Aligned_cols=234 Identities=12% Similarity=0.026 Sum_probs=128.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcc-eE-EeecC-----CCCEEEEEEeccCCeEEEEecCCCCCCCCCeEE
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKE-TF-RRDLK-----SGGFRIVEMLFRCNILALVGAGDNSQYPPTKVI 117 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~-~~-~~~~~-----~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~ 117 (411)
..|.++.-..+|.+.+ |+.+.+..++..+... .+ ..... -....+.++....++.+.++. . +-|.
T Consensus 324 ~~v~~i~~D~~g~lWi-Gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt-~------~GL~ 395 (758)
T 3ott_A 324 NQFYSLFRDSKGFYWF-GGANGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQLWIAT-D------GSIN 395 (758)
T ss_dssp CBEEEEEECTTCCEEE-EETTEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSCEEEEE-T------TEEE
T ss_pred ceEEEEEEcCCCCEEE-eeCCcceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCCEEEEe-C------CcHh
Confidence 4688888877776554 4544566666443211 11 11100 112346677767666555543 2 6788
Q ss_pred EEECCCCcEEEEEe-------ecCceeEEEEcCCeEEEE-E-cCeEEEEEcCCc-----eee---EEEeccC--CCcceE
Q 015198 118 IWDDHQSRCIGEFA-------FRSDVRSVKLSRDRIVVV-L-EHKIYVYSFVDL-----KLL---HQIETLA--NLRGLC 178 (411)
Q Consensus 118 vwd~~~~~~~~~~~-------~~~~i~~~~~~~~~~~~~-~-dg~i~iwd~~~~-----~~~---~~~~~~~--~~~~~~ 178 (411)
.+|..+++...-.. ....|.++...+++.+.+ . .+.|.++|..+. +.. ..+.... ....+.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 475 (758)
T 3ott_A 396 RYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFIN 475 (758)
T ss_dssp EEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEE
T ss_pred hcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEccccccccCCcceecccccccccccccceee
Confidence 99987775543221 124578888888877666 4 567889986421 111 1221111 112366
Q ss_pred EEccCCCceEEEEecCCCCeEEEEEcCCcceEEEecc----ccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEE
Q 015198 179 CLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAH----DSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQE 254 (411)
Q Consensus 179 ~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~----~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~ 254 (411)
++..+.++.+.+..|...|..+ ++........+... ...+.++....+|.+.+. +. +. +..||..+++.. .
T Consensus 476 ~i~~d~~g~lWi~~~t~~Gl~~-~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWig-t~-~G-l~~~~~~~~~~~-~ 550 (758)
T 3ott_A 476 QIIPDNEGNVWVLLYNNKGIDK-INPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVG-FH-GG-VMRINPKDESQQ-S 550 (758)
T ss_dssp EEEECTTSCEEEEETTCSSEEE-EETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEE-ET-TE-EEEECC--CCCC-B
T ss_pred eEEEcCCCCEEEEccCCCCcEE-EeCCCCceEEecCCCcCCCcccceEEECCCCCEEEE-ec-Cc-eEEEecCCCceE-E
Confidence 7777877776653354556444 44444444444211 345778888888876554 44 45 888987665432 1
Q ss_pred Ee-CCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEccccc
Q 015198 255 VR-RGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 255 ~~-~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
+. .+.....|.++... +|+ |..++..| |..||..+.+
T Consensus 551 ~~~~gl~~~~i~~i~~~-~g~-lWi~t~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 551 ISFGSFSNNEILSMTCV-KNS-IWVSTTNG-LWIIDRKTMD 588 (758)
T ss_dssp CCCCC---CCEEEEEEE-TTE-EEEEESSC-EEEEETTTCC
T ss_pred ecccCCCccceEEEEEC-CCC-EEEECCCC-eEEEcCCCce
Confidence 11 11122457787764 554 55566677 8888877654
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.13 E-value=0.61 Score=40.67 Aligned_cols=229 Identities=11% Similarity=0.034 Sum_probs=107.0
Q ss_pred CCCEEEEEe-C------CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc--
Q 015198 55 DYGCFAAGT-S------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR-- 125 (411)
Q Consensus 55 ~g~~la~g~-d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~-- 125 (411)
++.+++.|+ . ..+.+||..+........+...... ..+....+..++++|... ......+.+||+.+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~l~v~GG~~~-~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRY-VASVSLHDRIYVIGGYDG-RSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCS-SCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhcc-ccEEEECCEEEEEcCCCC-CccCceEEEEECCCCCCC
Confidence 344555555 2 3577888776442222112111111 112222344455544321 1123579999988776
Q ss_pred -EEEEEe--ecCceeEEEEcCCeEEEE--E-----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC
Q 015198 126 -CIGEFA--FRSDVRSVKLSRDRIVVV--L-----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ 195 (411)
Q Consensus 126 -~~~~~~--~~~~i~~~~~~~~~~~~~--~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 195 (411)
-...-. ....-.++....+..+++ . ...+.+||+.+.+-...-..........+... ++.++++ |+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCL-GGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEE-CCB
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEE-CCC
Confidence 333222 111122233333444444 1 24689999877654332222221112222222 3455555 433
Q ss_pred C-----CeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCceEEEEeCC-CCC
Q 015198 196 R-----GQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTRLQEVRRG-VDR 261 (411)
Q Consensus 196 d-----g~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~~~~~~~~-~~~ 261 (411)
+ ..+.+++.....-..+... ......+.+ ++++++.|+.+ .. +.+||+.+.+-.. +... ...
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~~r 244 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSS-VEAYNIRTDSWTT-VTSMTTPR 244 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-ECCCSSCC
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccce-EEEEeCCCCcEEE-CCCCCCcc
Confidence 3 3455566554433333211 111122222 66777777764 45 8999998775432 2211 011
Q ss_pred cceEEEEeCCCCCEEEEEeCC-----CcEEEEEccccc
Q 015198 262 AEIYSIALSPNVQWLAVASDK-----GTVHIFSLRVRV 294 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s~d-----g~I~vwd~~~~~ 294 (411)
.....+.+ ++++++.|+.+ ..|.+||+++.+
T Consensus 245 ~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 245 CYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp BSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred cceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 12222332 66777777765 357888887654
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.07 E-value=0.66 Score=40.50 Aligned_cols=228 Identities=14% Similarity=0.106 Sum_probs=104.8
Q ss_pred CCEEEEEe-C----CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEE
Q 015198 56 YGCFAAGT-S----CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEF 130 (411)
Q Consensus 56 g~~la~g~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~ 130 (411)
+.+++.|+ + ..+.+||..+........+...... ..+....+..++++|... ......+.+||..+++-...-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEEEECCEEEEEeCcCC-CccccceEEECCCCCceeeCC
Confidence 34555565 3 4577888776443222222111111 111222444455544322 112257889998877643332
Q ss_pred e--ecCceeEEEEcCCeEEEE--Ec-----CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC-----
Q 015198 131 A--FRSDVRSVKLSRDRIVVV--LE-----HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR----- 196 (411)
Q Consensus 131 ~--~~~~i~~~~~~~~~~~~~--~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d----- 196 (411)
. ....-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... ++.++++ |+.+
T Consensus 94 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~~~~~ 170 (302)
T 2xn4_A 94 NMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAV-GGYDVASRQ 170 (302)
T ss_dssp CCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCEETTTTE
T ss_pred CCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEE-eCCCCCCCc
Confidence 2 111122333334444444 22 3688899877654322111111111112222 3345555 4332
Q ss_pred --CeEEEEEcCCcceEEEec---cccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCceEEEEeCCC-CCcceE
Q 015198 197 --GQVRIEHFGLNMIKLINA---HDSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTRLQEVRRGV-DRAEIY 265 (411)
Q Consensus 197 --g~i~i~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~~~~~~~~~-~~~~v~ 265 (411)
..+.+++.....-..+.. .......+.+ ++++++.|+.+ .. +.+||+.+.+-. .+.... ......
T Consensus 171 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~-~~~~~~~~r~~~~ 246 (302)
T 2xn4_A 171 CLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKS-VEVYDPTTNAWR-QVADMNMCRRNAG 246 (302)
T ss_dssp ECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCC-EEEEETTTTEEE-EECCCSSCCBSCE
T ss_pred cccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccce-EEEEeCCCCCEe-eCCCCCCccccCe
Confidence 235555555433333221 1111122222 66777777754 35 899999876543 222110 111112
Q ss_pred EEEeCCCCCEEEEEeCCC-----cEEEEEccccc
Q 015198 266 SIALSPNVQWLAVASDKG-----TVHIFSLRVRV 294 (411)
Q Consensus 266 ~l~~spdg~~l~s~s~dg-----~I~vwd~~~~~ 294 (411)
.+. .++++++.|+.++ .+.+||+.+.+
T Consensus 247 ~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 247 VCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 222 2667777777553 48999988764
No 320
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.86 E-value=0.95 Score=40.60 Aligned_cols=229 Identities=7% Similarity=-0.016 Sum_probs=118.4
Q ss_pred cCCCCCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec----CCCCEEEEEEeccCC----eEEEEe--cCCC
Q 015198 40 SDVDEIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL----KSGGFRIVEMLFRCN----ILALVG--AGDN 108 (411)
Q Consensus 40 ~~~h~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~~~l~s--~~~d 108 (411)
....-..-+.|+|.|||.++++-. .|.|++++.+.........+ ..+......++++|+ +.+.++ ...+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 344456678999999999888887 89998887654332211111 234556778888874 444443 1222
Q ss_pred CCCCCCeEEEEECCCC----------cEEE-EEe--ecCceeEEEEcCCeEEEEE----------------cCeEEEEEc
Q 015198 109 SQYPPTKVIIWDDHQS----------RCIG-EFA--FRSDVRSVKLSRDRIVVVL----------------EHKIYVYSF 159 (411)
Q Consensus 109 ~~~~d~~i~vwd~~~~----------~~~~-~~~--~~~~i~~~~~~~~~~~~~~----------------dg~i~iwd~ 159 (411)
+.|.-|.+..+ +.+. .+. ..+.-..|.|.||+.+.+. .|.|.-++.
T Consensus 107 -----~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~ 181 (347)
T 3das_A 107 -----NRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTP 181 (347)
T ss_dssp -----EEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECT
T ss_pred -----CEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeC
Confidence 56666665431 1111 122 1234567999999877662 144444444
Q ss_pred CCce--------eeEEE-eccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc-CC------------------cceEE
Q 015198 160 VDLK--------LLHQI-ETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF-GL------------------NMIKL 211 (411)
Q Consensus 160 ~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~-~~------------------~~~~~ 211 (411)
. ++ ....+ .++.+ ...+++++++.+.+.--..++.-.|... .+ .++..
T Consensus 182 d-G~ip~~nPf~~~~i~a~G~RN---p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~ 257 (347)
T 3das_A 182 D-GEPAPGNPFPGSPVYSYGHRN---VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQ 257 (347)
T ss_dssp T-SSBCTTCSSTTCCEEEBCCSB---CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEE
T ss_pred C-CCccCCCCCCCCeEEeeCCCC---cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEe
Confidence 3 22 01122 12322 3344555556555443233332333111 11 11222
Q ss_pred EeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce---EEEEeCCCCCcceEEEEeCCCCCEEEEEe
Q 015198 212 INAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR---LQEVRRGVDRAEIYSIALSPNVQWLAVAS 280 (411)
Q Consensus 212 ~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~---~~~~~~~~~~~~v~~l~~spdg~~l~s~s 280 (411)
+..+......++|. +|.++...-..+. |....+..... ...+... ....+..|+..|||.++++..
T Consensus 258 ~~~~~~ap~G~~~~-~g~~~~~~l~~~~-l~~v~~~~~~~~~~~e~~l~~-~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 258 WSTDEASPSGIAYA-EGSVWMAGLRGER-LWRIPLKGTAAAADPQAFLEG-EYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp ECTTTCCEEEEEEE-TTEEEEEESTTCS-EEEEEEETTEESSCCEEESTT-TSSCEEEEEEEETTEEEEEEC
T ss_pred cCCCCCCCcceEEE-cCceeeccccCCE-EEEEEecCCceecceEEeecC-CCCCccEEEECCCCcEEEEEc
Confidence 22222344566775 4555655555556 66666654321 1122221 335788899999987665543
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.54 E-value=1.1 Score=39.18 Aligned_cols=231 Identities=12% Similarity=0.018 Sum_probs=104.3
Q ss_pred CCCCEEEEEe-----CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCC---CCCCCCCeEEEEECCCCc
Q 015198 54 QDYGCFAAGT-----SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGD---NSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 54 ~~g~~la~g~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---d~~~~d~~i~vwd~~~~~ 125 (411)
-++.+++.|+ -..+.+||..+........+...... ..+....+..++++|.. +.......+.+||+.+++
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 3456666665 24578888775443222112111111 11222244455554431 101112468889987775
Q ss_pred EEEEEe--ecCceeEEEEcCCeEEEE--E-----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 126 CIGEFA--FRSDVRSVKLSRDRIVVV--L-----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 126 ~~~~~~--~~~~i~~~~~~~~~~~~~--~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
-...-. ....-.++....+..+++ . -..+.+||+.+.+-...-..........+... ++.++++ |+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~ 178 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV-GGFD 178 (308)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE-CCBC
T ss_pred EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE-eCCC
Confidence 433211 111112233333444444 1 24688899877643322111111111122222 3345555 4333
Q ss_pred -----CeEEEEEcCCcceEEEec---cccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCceEEEEeCC-CCCc
Q 015198 197 -----GQVRIEHFGLNMIKLINA---HDSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTRLQEVRRG-VDRA 262 (411)
Q Consensus 197 -----g~i~i~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~~~~~~~~-~~~~ 262 (411)
..+.+++.....-..+.. .......+.+ ++++++.|+.+ .. +.+||+.+.+-.. +... ....
T Consensus 179 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~-~~~~p~~r~ 254 (308)
T 1zgk_A 179 GTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNS-VERYDVETETWTF-VAPMKHRRS 254 (308)
T ss_dssp SSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCC-EEEEETTTTEEEE-CCCCSSCCB
T ss_pred CCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccce-EEEEeCCCCcEEE-CCCCCCCcc
Confidence 345555554433222211 1111222223 66777777654 45 8999988765332 2111 0111
Q ss_pred ceEEEEeCCCCCEEEEEeCC-----CcEEEEEccccc
Q 015198 263 EIYSIALSPNVQWLAVASDK-----GTVHIFSLRVRV 294 (411)
Q Consensus 263 ~v~~l~~spdg~~l~s~s~d-----g~I~vwd~~~~~ 294 (411)
....+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 255 ~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 255 ALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred ceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1222222 56777777654 357888887654
No 322
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.46 E-value=1.2 Score=39.08 Aligned_cols=125 Identities=7% Similarity=-0.068 Sum_probs=70.6
Q ss_pred CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEec---CCCCeEEEEEcCCcceEEEeccccceeEEEecCCC
Q 015198 152 HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPG---LQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDG 228 (411)
Q Consensus 152 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g 228 (411)
..|+..++...+.. .+... ....+++. +..|+++. .....|+.-+.++.....+..+.. .++++++
T Consensus 88 ~~Iy~i~~dg~~~~-~l~~~----~~~~~s~~--g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGST-VLDPD----PCIYASLI--GNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCCE-EEECS----CEEEEEEE--TTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEET
T ss_pred CeEEEEeCCCCcce-EeecC----CccEEEEe--CCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEEC
Confidence 46777777655432 23221 12244443 44566543 234455555666666666665543 4567888
Q ss_pred CEEEEEcC-CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCC--cEEEEEccccc
Q 015198 229 LLLATAST-RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKG--TVHIFSLRVRV 294 (411)
Q Consensus 229 ~~l~s~s~-dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg--~I~vwd~~~~~ 294 (411)
+.|+-.+. ... |.+.++..+.....+.. ... ..+.|++.+|+-....+ .|..-+++...
T Consensus 157 ~~iy~t~~g~~~-Iy~~~l~g~~~~~l~~~-----~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~ 218 (302)
T 3s25_A 157 RYFYYNNPKNGQ-LYRYDTASQSEALFYDC-----NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN 218 (302)
T ss_dssp TEEEEECTTTCC-EEEEETTTTEEEEEECS-----CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC
T ss_pred CEEEEEeCCCce-EEEEECCCCCEEEEeCC-----Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC
Confidence 88876655 566 88888866554433332 122 23569999888665443 45555555544
No 323
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.45 E-value=1.2 Score=38.90 Aligned_cols=227 Identities=9% Similarity=0.042 Sum_probs=106.4
Q ss_pred CEEEEEe---CCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEe--
Q 015198 57 GCFAAGT---SCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA-- 131 (411)
Q Consensus 57 ~~la~g~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~-- 131 (411)
.+++.|+ ...+.+||..+........+...... ..+....+..++++|.. ......+.+||+.+++-...-.
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRD-AACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBS-CEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccce-eEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCC
Confidence 3555666 35678888776443222222111111 11122244444454432 2223688999988876543322
Q ss_pred ecCceeEEEEcCCeEEEE--Ec------CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC--------
Q 015198 132 FRSDVRSVKLSRDRIVVV--LE------HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ-------- 195 (411)
Q Consensus 132 ~~~~i~~~~~~~~~~~~~--~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-------- 195 (411)
....-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... ++.++++.|..
T Consensus 90 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 90 TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEE
T ss_pred ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccc
Confidence 111112233334444444 22 4588999887654322111111111122222 33455553321
Q ss_pred CCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCceEEEEeC-CCCCcceEE
Q 015198 196 RGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTRLQEVRR-GVDRAEIYS 266 (411)
Q Consensus 196 dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~~~~~~~-~~~~~~v~~ 266 (411)
-..+.+++.....-..+... ...-..+.+ ++++++.|+.+ .. +.+||+.+.+-. .+.. .........
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~W~-~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDN-VEYYDIKLNEWK-MVSPMPWKGVTVKC 243 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCC-EEEEETTTTEEE-ECCCCSCCBSCCEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCce-EEEeeCCCCcEE-ECCCCCCCccceeE
Confidence 23355566555443333221 111122222 66777777653 35 889998876532 2211 101112233
Q ss_pred EEeCCCCCEEEEEeCC-----CcEEEEEccccc
Q 015198 267 IALSPNVQWLAVASDK-----GTVHIFSLRVRV 294 (411)
Q Consensus 267 l~~spdg~~l~s~s~d-----g~I~vwd~~~~~ 294 (411)
+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 244 ~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 244 AAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 333 66777888754 458888887754
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.44 E-value=0.28 Score=43.83 Aligned_cols=112 Identities=13% Similarity=0.133 Sum_probs=64.6
Q ss_pred eEEEE--EcCeEEEEEcCCceeeEEEeccCCCcceEEEc-c--CCCceEEEEecCCCCeEEEEEcCCc-ceEEEec----
Q 015198 145 RIVVV--LEHKIYVYSFVDLKLLHQIETLANLRGLCCLS-H--HSSTSVLACPGLQRGQVRIEHFGLN-MIKLINA---- 214 (411)
Q Consensus 145 ~~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~l~~~g~~dg~i~i~~~~~~-~~~~~~~---- 214 (411)
+.+++ .||.|+-+|..+|+.+..+.... ....+... + ..++..++.....||.|+.++.... ....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN-FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG-SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc-cCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 44444 79999999999999999987651 01112111 1 1122333332246888887664432 2222221
Q ss_pred cccceeE---EEe-c----CCCCEEEEEcCCCeEEEEEECCCCceEEEEeCC
Q 015198 215 HDSHIAC---FTL-T----LDGLLLATASTRGTLIRIFNTVDGTRLQEVRRG 258 (411)
Q Consensus 215 ~~~~i~~---l~~-s----p~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~ 258 (411)
...++.. ..+ . ..+..+++|+.++. +...|+.+|+.+.++...
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~-l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTI-MYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEE-EEEEETTTCCEEEEESTT
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCE-EEEEECCCCcEEEEEecC
Confidence 1111111 001 0 13457889999999 999999999999998753
No 325
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.30 E-value=1.6 Score=39.30 Aligned_cols=66 Identities=11% Similarity=0.090 Sum_probs=42.8
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcE--EEEEe----ecCceeEEEEcCC----eEE-EE-E-c----
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRC--IGEFA----FRSDVRSVKLSRD----RIV-VV-L-E---- 151 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~--~~~~~----~~~~i~~~~~~~~----~~~-~~-~-d---- 151 (411)
....+.+.+++.++++... +.|.+++ .++. +..+. .......|+++|+ +.+ ++ . .
T Consensus 32 ~P~~ia~~pdG~l~V~e~~------g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERP------GRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CEEEEEECTTSCEEEEETT------TEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CceEEEEcCCCeEEEEeCC------CeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3567888899887777443 8999998 4432 11111 1356789999998 444 33 2 2
Q ss_pred -CeEEEEEcCCc
Q 015198 152 -HKIYVYSFVDL 162 (411)
Q Consensus 152 -g~i~iwd~~~~ 162 (411)
+.|..|+...+
T Consensus 104 ~~~v~r~~~~~~ 115 (352)
T 2ism_A 104 RNQVVRLRHLGE 115 (352)
T ss_dssp EEEEEEEEECSS
T ss_pred ccEEEEEEeCCC
Confidence 67888887643
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.02 E-value=1.9 Score=38.76 Aligned_cols=239 Identities=7% Similarity=0.008 Sum_probs=118.5
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCcEEEEecCCCcce-EE-e--ecCCCCEEEEEEeccCC----eEEEEecCCCCCC--CC
Q 015198 45 IELISVSWNQDYG-CFAAGTSCGFRIYNCEPFKET-FR-R--DLKSGGFRIVEMLFRCN----ILALVGAGDNSQY--PP 113 (411)
Q Consensus 45 ~~V~~l~~s~~g~-~la~g~dg~i~iw~~~~~~~~-~~-~--~~~~~~~~~~~~~~~~~----~~~l~s~~~d~~~--~d 113 (411)
.....|+|.|+|+ ++++-..|.|++++.+..... +. . ...........+.++|+ +.++++....... ..
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 3468999999999 555444899988875421110 00 0 01122344577888873 5544442210000 01
Q ss_pred CeEEEEECCCC--c--EEEE-Ee-ec------CceeEEEEcCCeEEEEE--c--------------CeEEEEEcCCc---
Q 015198 114 TKVIIWDDHQS--R--CIGE-FA-FR------SDVRSVKLSRDRIVVVL--E--------------HKIYVYSFVDL--- 162 (411)
Q Consensus 114 ~~i~vwd~~~~--~--~~~~-~~-~~------~~i~~~~~~~~~~~~~~--d--------------g~i~iwd~~~~--- 162 (411)
..|..+++..+ + .... +. .. .....|.|.||+.+.+. | +.|.-++....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 35666665433 1 1111 11 11 22457999999977762 2 45666665421
Q ss_pred ---------eeeEEEe-ccCCCcceEEEccCC-CceEEEEecCCCCeEEEEEcC-C------------------------
Q 015198 163 ---------KLLHQIE-TLANLRGLCCLSHHS-STSVLACPGLQRGQVRIEHFG-L------------------------ 206 (411)
Q Consensus 163 ---------~~~~~~~-~~~~~~~~~~~~~~~-~~~~l~~~g~~dg~i~i~~~~-~------------------------ 206 (411)
.....+. ++. ....+++++ .+.+.++--..++.=.|.... +
T Consensus 178 ~npf~~~~~~~~~i~a~G~r---np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR---NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS---EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCcCCCCCCccEEEEcCc---CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 0111221 222 344555555 444444322222111221110 0
Q ss_pred -------cceEEEeccccceeEEEecC-------CCCEEEEEcCCCeEEEEEECCCCceEEE--EeCCCCCcceEEEEeC
Q 015198 207 -------NMIKLINAHDSHIACFTLTL-------DGLLLATASTRGTLIRIFNTVDGTRLQE--VRRGVDRAEIYSIALS 270 (411)
Q Consensus 207 -------~~~~~~~~~~~~i~~l~~sp-------~g~~l~s~s~dg~~I~vwd~~~~~~~~~--~~~~~~~~~v~~l~~s 270 (411)
.++..+. +......++|.. +|.++++.-..+. |...++..++.... +... ....+..+++.
T Consensus 255 ~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~ 331 (353)
T 2g8s_A 255 EIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKD-VIVMSVNGDKVTEDGRILTD-RGQRIRDVRTG 331 (353)
T ss_dssp SSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTE-EEEEEEETTEEEEEEEESGG-GCCCEEEEEEC
T ss_pred CCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCE-EEEEEeCCCeEeeeEEcccC-CCCceeEEEEC
Confidence 0111122 223456677753 4667776666677 88888876544322 2111 12478999999
Q ss_pred CCCCEEEEEe-CCCcEEEEEcc
Q 015198 271 PNVQWLAVAS-DKGTVHIFSLR 291 (411)
Q Consensus 271 pdg~~l~s~s-~dg~I~vwd~~ 291 (411)
|||.++++.. .+| +||.+.
T Consensus 332 pdG~lyv~td~~~g--~I~ri~ 351 (353)
T 2g8s_A 332 PDGYLYVLTDESSG--ELLKVS 351 (353)
T ss_dssp TTSCEEEEECSTTE--EEEEEE
T ss_pred CCCcEEEEEeCCCC--EEEEEe
Confidence 9998665433 344 556553
No 327
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.69 E-value=2.1 Score=37.60 Aligned_cols=158 Identities=8% Similarity=-0.062 Sum_probs=83.6
Q ss_pred CeEEEEECCCCcEEEEEeecCceeEEEEcCCeEEEE--E---c--CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCc
Q 015198 114 TKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVV--L---E--HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSST 186 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~---d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (411)
..|+..++..++....... .. ..+++++..+. . + ..|+..++.. .....+..+.. ..+++++
T Consensus 88 ~~Iy~i~~dg~~~~~l~~~--~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s~~~~lt~~~~------~~~~~~g 156 (302)
T 3s25_A 88 NSLCRIKRNGHGSTVLDPD--PC--IYASLIGNYIYYLHYDTQTATSLYRIRIDG-EEKKKIKNHYL------FTCNTSD 156 (302)
T ss_dssp EEEEEEETTSCCCEEEECS--CE--EEEEEETTEEEEEEESSSSCEEEEEEETTS-CCCEEEESSCC------CCSEEET
T ss_pred CeEEEEeCCCCcceEeecC--Cc--cEEEEeCCEEEEEeecCCCCceEEEEECCC-CCeEEEeCCCc------eEeeEEC
Confidence 6788888776653332222 22 24455555554 3 2 3466666553 33334433321 2234455
Q ss_pred eEEEEecCCCCeEEEEEcCCcceEEEeccccceeEEEecCCCCEEEEEcCC--CeEEEEEECCCCceEEEEeCCCCCcce
Q 015198 187 SVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFTLTLDGLLLATASTR--GTLIRIFNTVDGTRLQEVRRGVDRAEI 264 (411)
Q Consensus 187 ~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~~i~~l~~sp~g~~l~s~s~d--g~~I~vwd~~~~~~~~~~~~~~~~~~v 264 (411)
..|+.+......|..-...+...+.+.. +... ..+.|++.+|+-.... .. |..-++.... ...+.. . .+
T Consensus 157 ~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~~~~-I~~~~ldG~~-~~~Lt~--~--~~ 227 (302)
T 3s25_A 157 RYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNRDNA-IVHVNINNPN-PVVLTE--A--NI 227 (302)
T ss_dssp TEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGGTTE-EEEECSSSCC-CEECSC--S--CE
T ss_pred CEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCCCcE-EEEEECCCCC-eEEEeC--C--Cc
Confidence 5677765445677776666655444432 2222 3356999888766543 35 7777775544 334432 1 23
Q ss_pred EEEEeCCCCCEEEEEeC--CCcEEEEEcccc
Q 015198 265 YSIALSPNVQWLAVASD--KGTVHIFSLRVR 293 (411)
Q Consensus 265 ~~l~~spdg~~l~s~s~--dg~I~vwd~~~~ 293 (411)
..|+|++.+|+-+.. .+.|..-+++..
T Consensus 228 --~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 228 --EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp --EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred --ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 347788888876643 344555555443
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.94 E-value=2.3 Score=35.25 Aligned_cols=148 Identities=12% Similarity=0.016 Sum_probs=86.5
Q ss_pred CceeEEEEcCCeEEEE-EcCeEEEEEcCCcee------eEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcC-
Q 015198 134 SDVRSVKLSRDRIVVV-LEHKIYVYSFVDLKL------LHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFG- 205 (411)
Q Consensus 134 ~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~- 205 (411)
..+..++|+|++.+.+ .+|.++-.+..+.+. -..+-. ..-....++.+++++.+.++ .||.|+-++..
T Consensus 41 ~~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~-~Gw~~F~a~~fD~~G~LYav---~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGN-GGWNQFQFLFFDPNGYLYAV---SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEEC-SCGGGCSEEEECTTSCEEEE---ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEecc-cccccceEEEECCCCCEEEe---CCCEEEEeCCCc
Confidence 3677999999998777 888887777644211 122211 11112356667777766654 46888664431
Q ss_pred -Ccc------eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCc------eEEEEe-CCCCCcceEEEEeCC
Q 015198 206 -LNM------IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGT------RLQEVR-RGVDRAEIYSIALSP 271 (411)
Q Consensus 206 -~~~------~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~------~~~~~~-~~~~~~~v~~l~~sp 271 (411)
... ...-..--..+..|.|.|+|.+.++. |+. ++-+...++. ....+. . .-.....+.|.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~-lyr~~~P~~~~~~wl~~~~~~g~~--g~~~yr~l~f~~ 191 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ-FYKALPPVSNQDNWLARATKIGQG--GWDTFKFLFFSS 191 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE-EEEECCCSSTTCCHHHHCEEEESS--SGGGEEEEEECT
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc-EEecCCCCCCCcccccccceeccC--CcceEEEEEECC
Confidence 110 11112223567999999999877776 777 6544333221 112222 2 233455677999
Q ss_pred CCCEEEEEeCCCcEEEEEccccc
Q 015198 272 NVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 272 dg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
++.+.++. ++ ++|.....+
T Consensus 192 ~G~l~~v~--~g--~~Y~~~~p~ 210 (236)
T 1tl2_A 192 VGTLFGVQ--GG--KFYEDYPPS 210 (236)
T ss_dssp TSCEEEEE--TT--EEEEESCCC
T ss_pred CCcEEEEe--CC--eEEecCCcc
Confidence 99877766 77 666665543
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.65 E-value=4.6 Score=37.69 Aligned_cols=100 Identities=8% Similarity=0.053 Sum_probs=55.9
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEEEee---------cCceeEEEEcC----CeEEEE-E----
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAF---------RSDVRSVKLSR----DRIVVV-L---- 150 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~~---------~~~i~~~~~~~----~~~~~~-~---- 150 (411)
....+.|.+++.++++.... +.|++++..+++....... ...+..|+|+| ++.+.+ .
T Consensus 28 ~P~~~a~~pdG~l~V~e~~g-----g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERAT-----GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp SEEEEEECTTSCEEEEETTT-----CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CceEEEEcCCCcEEEEEcCC-----CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 34578888998888876543 5788888655554322221 34566899998 455444 2
Q ss_pred ----------cCeEEEEEcCCc--e-----eeE-EEeccCCCcceEEEccCCCceEEEEecC
Q 015198 151 ----------EHKIYVYSFVDL--K-----LLH-QIETLANLRGLCCLSHHSSTSVLACPGL 194 (411)
Q Consensus 151 ----------dg~i~iwd~~~~--~-----~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 194 (411)
...|.-|++... + .+. .+.. ........+.+.+++.+.++.|.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~-~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS-SKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC-CSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC-CCCCCCCeEeECCCCeEEEEECC
Confidence 135666655321 1 111 1211 11123456667777777776664
No 330
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.59 E-value=1.7 Score=41.35 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=66.1
Q ss_pred eEEEEEcCCCCEEEEEe--CCcEEEEecCCCcc-----------eEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCC
Q 015198 47 LISVSWNQDYGCFAAGT--SCGFRIYNCEPFKE-----------TFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPP 113 (411)
Q Consensus 47 V~~l~~s~~g~~la~g~--dg~i~iw~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d 113 (411)
...+..+|||+++++++ +.++.++++++... ....+. .-........|.+++....+.--|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~GlGPlHt~Fd~~G~aYTtlfid----- 398 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELGLGPLHTTFDGRGNAYTTLFID----- 398 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCCSCEEEEEECSSSEEEEEETTT-----
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCCCcccEEEECCCCceEeeeeec-----
Confidence 45688899999999888 99999999985322 122222 234567788899999888887766
Q ss_pred CeEEEEECCCC----------cEEEEEeecCceeEEEE------cCCeEEEE
Q 015198 114 TKVIIWDDHQS----------RCIGEFAFRSDVRSVKL------SRDRIVVV 149 (411)
Q Consensus 114 ~~i~vwd~~~~----------~~~~~~~~~~~i~~~~~------~~~~~~~~ 149 (411)
..|.-|++... ..+..+...-.+-.+.. .++|++++
T Consensus 399 SqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv 450 (638)
T 3sbq_A 399 SQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLV 450 (638)
T ss_dssp TEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEE
T ss_pred ceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEE
Confidence 99999997542 45555552222333332 46777776
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.28 E-value=0.72 Score=38.29 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=42.9
Q ss_pred cceeEEEecCCCCEEEEEcCCCeEEEEEECCCCce------EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEE
Q 015198 217 SHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTR------LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFS 289 (411)
Q Consensus 217 ~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~------~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd 289 (411)
..+..++|+|+|.+.++ .+|. ++-.+..++.. -..+-.. .-..-..+.|.|+|.+.++ .||.|+-++
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~-Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDK-IYKGTPPTHDNDNWMGRAKKIGNG-GWNQFQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTE-EEEESCCCSTTCCHHHHCEEEECS-CGGGCSEEEECTTSCEEEE--ETTEEEEES
T ss_pred ccceeEEECCCccEEEE--eCCe-EEEECCCCCCcccccccccEeccc-ccccceEEEECCCCCEEEe--CCCEEEEeC
Confidence 47789999999997766 6777 77766644211 1122110 1112467899999998777 568666554
No 332
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.24 E-value=3.8 Score=35.46 Aligned_cols=188 Identities=9% Similarity=0.012 Sum_probs=89.1
Q ss_pred CCCEEEEEe-C-----CcEEEEecCCCc---ceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 55 DYGCFAAGT-S-----CGFRIYNCEPFK---ETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 55 ~g~~la~g~-d-----g~i~iw~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
++++++.|+ + ..+.+||..+.. ......+....... .+....+..++++ +.+.......+.+||+.+++
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~-~~~~~~~~lyv~G-G~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLA-GATTLGDMIYVSG-GFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSC-EEEEETTEEEEEC-CBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccce-eEEEECCEEEEEc-ccCCCcccceEEEEcCCCCe
Confidence 566777776 4 357888887655 32222221111111 1112234444444 43211123579999988876
Q ss_pred EEEEEe--ecCceeEEEEcCCeEEEE--E-----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 126 CIGEFA--FRSDVRSVKLSRDRIVVV--L-----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 126 ~~~~~~--~~~~i~~~~~~~~~~~~~--~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
-...-. ....-.++....+..+++ . -..+.+||+.+.+-...-..........+... ++.++++ |+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~-GG~~ 216 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVV-GGFD 216 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCBC
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEE-eCCC
Confidence 544322 121222233333444444 1 25688999877654332111111111122222 2345555 4333
Q ss_pred -----CeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCc
Q 015198 197 -----GQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGT 250 (411)
Q Consensus 197 -----g~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~ 250 (411)
..+.+++.....-..+... ......+.+ ++++++.|+.+ .. |.+||+.+.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSS-IECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEE-EEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCccccc-EEEEcCCCCe
Confidence 3566666655443333211 111122222 66777777765 34 7888987764
No 333
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.24 E-value=3.8 Score=35.55 Aligned_cols=189 Identities=12% Similarity=0.057 Sum_probs=88.5
Q ss_pred CCCEEEEEe-C----CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEE
Q 015198 55 DYGCFAAGT-S----CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGE 129 (411)
Q Consensus 55 ~g~~la~g~-d----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~ 129 (411)
++.+++.|+ + ..+.+||..+........+....... .+....+..++++|..........+.+||..+++-...
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSL-AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSC-EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccce-eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 566777776 4 56778887765433322221111111 11122344455544321112236789999888764433
Q ss_pred Ee--ecCceeEEEEcCCeEEEE--E---------cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC
Q 015198 130 FA--FRSDVRSVKLSRDRIVVV--L---------EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR 196 (411)
Q Consensus 130 ~~--~~~~i~~~~~~~~~~~~~--~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d 196 (411)
-. ....-.++....+..+++ . -..+.+||+.+.+-...-.............. ++.++++ |+.+
T Consensus 134 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~-GG~~ 210 (306)
T 3ii7_A 134 PSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAV-GGQN 210 (306)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCEE
T ss_pred CCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEE-eCCC
Confidence 22 111222333334444444 1 34588999877643322111111111122222 3345555 4333
Q ss_pred -----CeEEEEEcCCcceEEEe---ccccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCc
Q 015198 197 -----GQVRIEHFGLNMIKLIN---AHDSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGT 250 (411)
Q Consensus 197 -----g~i~i~~~~~~~~~~~~---~~~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~ 250 (411)
..+.+++.....-..+. .......++.+ ++++++.|+.+ .. +.+||+.+.+
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-~~~yd~~~~~ 274 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGH-ILEYNTETDK 274 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCE-EEEEETTTTE
T ss_pred CCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeee-EEEEcCCCCe
Confidence 24555555543322221 11122222333 66777888754 45 8889987764
No 334
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.21 E-value=4.5 Score=36.28 Aligned_cols=191 Identities=9% Similarity=0.019 Sum_probs=99.6
Q ss_pred EEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc-EEEEEe----ecCceeEEEEcCC----eEEEE--E----c--
Q 015198 89 RIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR-CIGEFA----FRSDVRSVKLSRD----RIVVV--L----E-- 151 (411)
Q Consensus 89 ~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~-~~~~~~----~~~~i~~~~~~~~----~~~~~--~----d-- 151 (411)
....+.+.+++.++++... +.|++++ .+++ .+..+. .......|+++|+ +.+.+ . +
T Consensus 30 ~P~~ia~~pdG~l~V~e~~------g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERP------GRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CEEEEEEEETTEEEEEETT------TEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCeEEEEcCCCeEEEEeCC------CEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 3567778888887777543 8899887 4554 222211 1356789999997 54444 2 2
Q ss_pred --CeEEEEEcCCc--e-----ee-EEEeccCCCcceEEEccCCCceEEEEecCC------------CCeEEEEEcCCc--
Q 015198 152 --HKIYVYSFVDL--K-----LL-HQIETLANLRGLCCLSHHSSTSVLACPGLQ------------RGQVRIEHFGLN-- 207 (411)
Q Consensus 152 --g~i~iwd~~~~--~-----~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~------------dg~i~i~~~~~~-- 207 (411)
+.|..|+.... . .+ ..+.... ......+.+.+++.+.++.|.. .|.|.-.+.+++
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~-~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAY-IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCS-SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCC-CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 57778877543 1 11 1122111 0112234555566666655531 234443333333
Q ss_pred ------ceEE-EeccccceeEEEecC-CCCEEEEEcCC---CeEEEEEECCCCc------------------eEEEEeCC
Q 015198 208 ------MIKL-INAHDSHIACFTLTL-DGLLLATASTR---GTLIRIFNTVDGT------------------RLQEVRRG 258 (411)
Q Consensus 208 ------~~~~-~~~~~~~i~~l~~sp-~g~~l~s~s~d---g~~I~vwd~~~~~------------------~~~~~~~~ 258 (411)
.... ..++.. ...++|+| +|+++++-... .. |.+.. .+. .+..+..
T Consensus 182 ~~npf~~~~i~a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~de-i~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~- 256 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGHRN-PQGIDWHRASGVMVATEHGPVGHDE-VNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGS- 256 (354)
T ss_dssp TTSSSTTCCEEEECCSC-CCEEEECTTTCCEEEEECCSSSCCE-EEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTT-
T ss_pred CCCCCCCCcEEEEccCC-cceEEEeCCCCCEEEEecCCCCCcE-EEEec--CCCcCCCCcccCCCCCCCCcCCEeecCC-
Confidence 1112 233433 46799999 67755543221 12 33322 221 1222211
Q ss_pred CCCcceEEEEeC-------CCCCEEEEEeCCCcEEEEEcccc
Q 015198 259 VDRAEIYSIALS-------PNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 259 ~~~~~v~~l~~s-------pdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
.......++|. .+|.++++.-..+.|...+++..
T Consensus 257 -~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 257 -ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp -CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGG
T ss_pred -CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCC
Confidence 12356788884 46766666666677887777653
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=92.67 E-value=5.2 Score=35.59 Aligned_cols=53 Identities=17% Similarity=0.110 Sum_probs=27.9
Q ss_pred EEEEECCCCceE--EEEeCCCCCcceEEEEeCCCCCEEEEEeCCC------cEEEEEccccccCC
Q 015198 241 IRIFNTVDGTRL--QEVRRGVDRAEIYSIALSPNVQWLAVASDKG------TVHIFSLRVRVVGE 297 (411)
Q Consensus 241 I~vwd~~~~~~~--~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg------~I~vwd~~~~~~~~ 297 (411)
+.+||+.+.+-. ..+.. ....-..+. .++++++.|+.++ .|.++++++++..+
T Consensus 287 ~~~yd~~~~~W~~~~~~p~--~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~ 347 (357)
T 2uvk_A 287 TDIHLWHNGKWDKSGELSQ--GRAYGVSLP--WNNSLLIIGGETAGGKAVTDSVLITVKDNKVTV 347 (357)
T ss_dssp CEEEECC---CEEEEECSS--CCBSSEEEE--ETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEE
T ss_pred EEEEecCCCceeeCCCCCC--CcccceeEE--eCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEe
Confidence 788998776432 22222 112222222 4678888888653 46667888877554
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.86 E-value=11 Score=37.39 Aligned_cols=198 Identities=12% Similarity=0.013 Sum_probs=90.9
Q ss_pred CCCCEEEEEe-C----CcEEEEecCCCcceEEe-e-----cCCCCEEEEEEecc-CCeEEEEecCCCCCCCCCeEEEEEC
Q 015198 54 QDYGCFAAGT-S----CGFRIYNCEPFKETFRR-D-----LKSGGFRIVEMLFR-CNILALVGAGDNSQYPPTKVIIWDD 121 (411)
Q Consensus 54 ~~g~~la~g~-d----g~i~iw~~~~~~~~~~~-~-----~~~~~~~~~~~~~~-~~~~~l~s~~~d~~~~d~~i~vwd~ 121 (411)
-++.+++.|+ + ..+.+||..+....... . +............. .+..++++|.......-..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 5677777777 3 35778887765433222 1 11111112222222 4444455443321112256889998
Q ss_pred CCCcEEEEEe--ecCceeEEEEcCCeEEEEE-----cCeEEEEEcCCceeeEEEe---ccCCCcceEEEccCCC-ceEEE
Q 015198 122 HQSRCIGEFA--FRSDVRSVKLSRDRIVVVL-----EHKIYVYSFVDLKLLHQIE---TLANLRGLCCLSHHSS-TSVLA 190 (411)
Q Consensus 122 ~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~-----dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~l~ 190 (411)
.+++-...-. ....-.++....++.+++. ++.+.+||+.+.+-...-. .........++..+.+ +.+++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 8765433211 1122223333224444442 1279999998765332211 1111111222232322 45555
Q ss_pred EecCC-C-----CeEEEEEcCCcc------eEEEecc--cc-ceeEEEecCCCCEEEEEcC--------CCeEEEEEECC
Q 015198 191 CPGLQ-R-----GQVRIEHFGLNM------IKLINAH--DS-HIACFTLTLDGLLLATAST--------RGTLIRIFNTV 247 (411)
Q Consensus 191 ~~g~~-d-----g~i~i~~~~~~~------~~~~~~~--~~-~i~~l~~sp~g~~l~s~s~--------dg~~I~vwd~~ 247 (411)
+.|.. + ..+.+++..... -..+... .. .-.+++...++++++.|+. ... |.+||+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~-v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNS-IISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTS-EEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCe-EEEEECC
Confidence 54421 2 346666655443 2222211 11 1112233333777777774 345 8999998
Q ss_pred CCceE
Q 015198 248 DGTRL 252 (411)
Q Consensus 248 ~~~~~ 252 (411)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 77543
No 337
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.68 E-value=6.3 Score=34.35 Aligned_cols=227 Identities=15% Similarity=0.104 Sum_probs=102.3
Q ss_pred EEEEeCCcEEEEecCCCcceEEeecCC-CCEEEEEEeccCCeEEEEecC-----CCCCCCCCeEEEEECCCCcEEEEEee
Q 015198 59 FAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAG-----DNSQYPPTKVIIWDDHQSRCIGEFAF 132 (411)
Q Consensus 59 la~g~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~-----~d~~~~d~~i~vwd~~~~~~~~~~~~ 132 (411)
++.|+ ..+.+||..+.+... ..+.. ......++....+..++++|. .........+.+||..+++-...-..
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET-TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC-CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 33444 678889988755432 22211 112223333445556666652 11000113478889887764322111
Q ss_pred c--CceeEEEEcCCeEEEE--Ec--------CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC----
Q 015198 133 R--SDVRSVKLSRDRIVVV--LE--------HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR---- 196 (411)
Q Consensus 133 ~--~~i~~~~~~~~~~~~~--~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d---- 196 (411)
. ..-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... ++.++++.|..+
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRKC 163 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSCB
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCcc
Confidence 1 1111233334444444 21 3588899877643221111111112222222 234555544212
Q ss_pred -CeEEEEEcCCcceEEEec---cccceeEEEecCCCCEEEEEcCCCe----EEEEEECCCCceEEEEeCC-CCCcceEEE
Q 015198 197 -GQVRIEHFGLNMIKLINA---HDSHIACFTLTLDGLLLATASTRGT----LIRIFNTVDGTRLQEVRRG-VDRAEIYSI 267 (411)
Q Consensus 197 -g~i~i~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~l~s~s~dg~----~I~vwd~~~~~~~~~~~~~-~~~~~v~~l 267 (411)
..+.+++.....-..+.. ......++.+ ++++++.|+.++. .+.+||+.+.+-.. +... ........+
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~ 240 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP-FEAFPQERSSLSLV 240 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE-CCCCCCcccceeEE
Confidence 245555554433222221 1111122222 6677777775431 28899987765332 2211 011122223
Q ss_pred EeCCCCCEEEEEeCCC--------------cEEEEEccccc
Q 015198 268 ALSPNVQWLAVASDKG--------------TVHIFSLRVRV 294 (411)
Q Consensus 268 ~~spdg~~l~s~s~dg--------------~I~vwd~~~~~ 294 (411)
.+ ++++++.|+.++ .|.+||+++.+
T Consensus 241 ~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 241 SL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 32 567777777532 37788887654
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.56 E-value=12 Score=35.67 Aligned_cols=97 Identities=10% Similarity=0.029 Sum_probs=63.0
Q ss_pred EccCCCceEEEEecCCCCeEEEEEcCC-------cc-------eEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEE
Q 015198 180 LSHHSSTSVLACPGLQRGQVRIEHFGL-------NM-------IKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFN 245 (411)
Q Consensus 180 ~~~~~~~~~l~~~g~~dg~i~i~~~~~-------~~-------~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd 245 (411)
+..+|+|++++++|-.+.++.+.+... +. ....+. .-.....+|.++|....+---|.. |.-|+
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~-GlGPlHt~Fd~~G~aYTtlfidSq-vvkWn 405 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL-GLGPLHTTFDGRGNAYTTLFIDSQ-VVKWN 405 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC-CSCEEEEEECSSSEEEEEETTTTE-EEEEE
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC-CCcccEEEECCCCceEeeeeecce-EEEEe
Confidence 345667889999898899999976653 11 112222 233457889999966666778998 99999
Q ss_pred CCCC----------ceEEEEeCCCCCcceEEEEe------CCCCCEEEEEeC
Q 015198 246 TVDG----------TRLQEVRRGVDRAEIYSIAL------SPNVQWLAVASD 281 (411)
Q Consensus 246 ~~~~----------~~~~~~~~~~~~~~v~~l~~------spdg~~l~s~s~ 281 (411)
+... ..+..+..+ - .+-.+.- .+||+||++...
T Consensus 406 i~~a~~~~~g~~~~~v~~k~dv~--Y-qpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 406 MEEAVRAYKGEKVNYIKQKLDVH--Y-QPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp HHHHHHHHTTCCCCCEEEEEECS--S-CEEEEEETTTTSTTCCSCEEEEEES
T ss_pred ccHHHHHhcCccCCeeeeccccc--c-CCcccccCCCccCCCCccEEEEecc
Confidence 8653 455566653 2 2233333 478888887653
No 339
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=90.12 E-value=12 Score=34.85 Aligned_cols=106 Identities=9% Similarity=0.031 Sum_probs=58.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CcEEEEecCCCcceEEeecC------CCCEEEEEEeccC----CeEEEEecCC-----
Q 015198 44 EIELISVSWNQDYGCFAAGTS-CGFRIYNCEPFKETFRRDLK------SGGFRIVEMLFRC----NILALVGAGD----- 107 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~d-g~i~iw~~~~~~~~~~~~~~------~~~~~~~~~~~~~----~~~~l~s~~~----- 107 (411)
-...+.|+|.|+|+++++-.. +.|++++...........+. ........++++| ++.+.++...
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345689999999997777665 46887775433322222221 1345567888887 5555554321
Q ss_pred -CCC-CCCCeEEEEECCCC--c-----EEEE-Ee--ecCceeEEEEcCCeEEEE
Q 015198 108 -NSQ-YPPTKVIIWDDHQS--R-----CIGE-FA--FRSDVRSVKLSRDRIVVV 149 (411)
Q Consensus 108 -d~~-~~d~~i~vwd~~~~--~-----~~~~-~~--~~~~i~~~~~~~~~~~~~ 149 (411)
+.. .....|.-+++..+ + .+.. +. ..+....|.|.|||.+.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv 159 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYY 159 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEE
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEE
Confidence 000 00135555554322 1 1111 21 124578899999987776
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.97 E-value=16 Score=32.36 Aligned_cols=22 Identities=9% Similarity=-0.040 Sum_probs=13.6
Q ss_pred CCeEEEEecCCCCCCCCCeEEEEECCC
Q 015198 97 CNILALVGAGDNSQYPPTKVIIWDDHQ 123 (411)
Q Consensus 97 ~~~~~l~s~~~d~~~~d~~i~vwd~~~ 123 (411)
.+..++++|... ..+.++|+.+
T Consensus 19 ~~~iyv~GG~~~-----~~~~~~d~~~ 40 (357)
T 2uvk_A 19 NDTVYIGLGSAG-----TAWYKLDTQA 40 (357)
T ss_dssp TTEEEEECGGGT-----TCEEEEETTS
T ss_pred CCEEEEEeCcCC-----CeEEEEcccc
Confidence 444555555443 6788889764
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.88 E-value=15 Score=31.95 Aligned_cols=227 Identities=12% Similarity=0.060 Sum_probs=101.3
Q ss_pred EEEEEeCCcEEEEecCCCcceEEeecCC-CCEEEEEEeccCCeEEEEecCC-CCC----CCCCeEEEEECCCCcEEEEEe
Q 015198 58 CFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGD-NSQ----YPPTKVIIWDDHQSRCIGEFA 131 (411)
Q Consensus 58 ~la~g~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~-d~~----~~d~~i~vwd~~~~~~~~~~~ 131 (411)
+++.|+ ..+..||..+.+... ..+.. ......++....+..++++|.. +.. .....+.+||..+++-...-.
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344444 337888887654332 22211 1122233344455566666521 100 011237888987765433211
Q ss_pred --ecCceeEEEEcCCeEEEE--Ec-------CeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC-----
Q 015198 132 --FRSDVRSVKLSRDRIVVV--LE-------HKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ----- 195 (411)
Q Consensus 132 --~~~~i~~~~~~~~~~~~~--~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~----- 195 (411)
....-.++....+..+++ .+ ..+.+||+.+.+-...-..........+... ++.++++.|..
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISH--NGMIYCLGGKTDDKKC 173 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEE--TTEEEEECCEESSSCB
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEE--CCEEEEEcCCCCCCCc
Confidence 111122333334444444 22 3588888877643322111111111112222 34455554421
Q ss_pred CCeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCceEEEEeCC-CCCcceEE
Q 015198 196 RGQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTRLQEVRRG-VDRAEIYS 266 (411)
Q Consensus 196 dg~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~~~~~~~~-~~~~~v~~ 266 (411)
-..+.+++.....-..+... ......+. -++++++.|+.+ .. +.+||+.+.+-.. +... ........
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~-~~~yd~~~~~W~~-~~~~p~~r~~~~~ 249 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSAS-VEAFDLKTNKWEV-MTEFPQERSSISL 249 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEE-EEEEETTTCCEEE-CCCCSSCCBSCEE
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccce-EEEEECCCCeEEE-CCCCCCcccceEE
Confidence 12456666555433333211 11112222 266777777643 24 7889988765332 2111 01111122
Q ss_pred EEeCCCCCEEEEEeCC--------------CcEEEEEccccc
Q 015198 267 IALSPNVQWLAVASDK--------------GTVHIFSLRVRV 294 (411)
Q Consensus 267 l~~spdg~~l~s~s~d--------------g~I~vwd~~~~~ 294 (411)
+. .++++++.|+.+ ..+.+||+.+.+
T Consensus 250 ~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 250 VS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 22 256677776643 357888887654
No 342
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=86.53 E-value=15 Score=31.60 Aligned_cols=188 Identities=13% Similarity=0.075 Sum_probs=86.7
Q ss_pred CCCEEEEEe-C-----CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEE
Q 015198 55 DYGCFAAGT-S-----CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIG 128 (411)
Q Consensus 55 ~g~~la~g~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~ 128 (411)
++.+++.|+ + ..+.+||..+........+...... ..+....+..++++|... ......+.+||+.+++-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRST-LGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccc-eEEEEECCEEEEEcCCCC-CccCceEEEEeCCCCeEee
Confidence 566777776 4 3477788776443322222111111 111222445555554322 1111468889988776443
Q ss_pred EEe--ecCceeEEEEcCCeEEEE--E-------cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCC-
Q 015198 129 EFA--FRSDVRSVKLSRDRIVVV--L-------EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQR- 196 (411)
Q Consensus 129 ~~~--~~~~i~~~~~~~~~~~~~--~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~d- 196 (411)
.-. ....-.++....+..+++ . -..+.+||+.+.+-...-..........+... ++.++++ |+.+
T Consensus 139 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~~~ 215 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAV-GGHDG 215 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE-CCBSS
T ss_pred cCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEE-CCCCC
Confidence 322 111222333334444444 1 24588999877644322111111111122222 3355555 4333
Q ss_pred ----CeEEEEEcCCcceEEEecc---ccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCc
Q 015198 197 ----GQVRIEHFGLNMIKLINAH---DSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGT 250 (411)
Q Consensus 197 ----g~i~i~~~~~~~~~~~~~~---~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~ 250 (411)
..+.+++.....-..+... ......+. -++++++.|+.+ .. +.+||+.+.+
T Consensus 216 ~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~-v~~yd~~~~~ 278 (302)
T 2xn4_A 216 PLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLAS-VEYYNPTTDK 278 (302)
T ss_dssp SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCC-EEEEETTTTE
T ss_pred CcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCccccc-EEEEcCCCCe
Confidence 2466666555443333221 11111222 266777777754 34 7888887664
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.47 E-value=37 Score=33.54 Aligned_cols=178 Identities=7% Similarity=0.006 Sum_probs=86.1
Q ss_pred CeEEEEECCCCcEEEEE-e-------ecCceeEEEEc--CCeEEEE--E------cCeEEEEEcCCceeeEEEeccCCCc
Q 015198 114 TKVIIWDDHQSRCIGEF-A-------FRSDVRSVKLS--RDRIVVV--L------EHKIYVYSFVDLKLLHQIETLANLR 175 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~~-~-------~~~~i~~~~~~--~~~~~~~--~------dg~i~iwd~~~~~~~~~~~~~~~~~ 175 (411)
..+.+||..+++....- . ....-.++... .+..+++ . -+.+.+||+.+.+-...-.......
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~ 491 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRF 491 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCB
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcc
Confidence 56888998877654433 1 11112233333 3444444 1 1358889987754322111111111
Q ss_pred ceEEEccCCCceEEEEecCCCC-eEEEEEcCCcceEEEec------cccceeEEEecCC-CCEEEEEcC--C-----CeE
Q 015198 176 GLCCLSHHSSTSVLACPGLQRG-QVRIEHFGLNMIKLINA------HDSHIACFTLTLD-GLLLATAST--R-----GTL 240 (411)
Q Consensus 176 ~~~~~~~~~~~~~l~~~g~~dg-~i~i~~~~~~~~~~~~~------~~~~i~~l~~sp~-g~~l~s~s~--d-----g~~ 240 (411)
...+.... ++.++++.|.... .+.+++.....-..+.. ......++.+..+ +++++.|+. + ..
T Consensus 492 ~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~- 569 (695)
T 2zwa_A 492 RHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDK- 569 (695)
T ss_dssp SCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCE-
T ss_pred cceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCc-
Confidence 11222211 4456666442222 46666665544333321 1222233555555 667777765 2 35
Q ss_pred EEEEECCCCce-----EEEEeCC--CCCcceEEEEeCCCCCEEEEEeC--------CCcEEEEEccccc
Q 015198 241 IRIFNTVDGTR-----LQEVRRG--VDRAEIYSIALSPNVQWLAVASD--------KGTVHIFSLRVRV 294 (411)
Q Consensus 241 I~vwd~~~~~~-----~~~~~~~--~~~~~v~~l~~spdg~~l~s~s~--------dg~I~vwd~~~~~ 294 (411)
+.+||+.+.+- -..+... ........+.+ .++++++.|+. ...|.+||+.+.+
T Consensus 570 v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 570 AIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 88999988761 1222110 01112222222 33677777774 3458999988764
No 344
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=83.32 E-value=26 Score=31.67 Aligned_cols=164 Identities=8% Similarity=0.066 Sum_probs=88.7
Q ss_pred CeEEEEECCCC--cEEEEEee-------cCceeEEEEc---CC----eEEE-E---EcCeEEEEEcCCceeeEEEeccCC
Q 015198 114 TKVIIWDDHQS--RCIGEFAF-------RSDVRSVKLS---RD----RIVV-V---LEHKIYVYSFVDLKLLHQIETLAN 173 (411)
Q Consensus 114 ~~i~vwd~~~~--~~~~~~~~-------~~~i~~~~~~---~~----~~~~-~---~dg~i~iwd~~~~~~~~~~~~~~~ 173 (411)
-.|.+||+.++ +.++.+.. ...+..+.+. ++ +.++ + ....|.++|+.+++.-+.+.....
T Consensus 123 pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 123 PAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp CEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGS
T ss_pred ceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCc
Confidence 58999999999 99999874 3457788877 22 2222 2 367899999998876655521111
Q ss_pred C----------------cceEEEccCCC----ceEEEEecCCCCeEE-EE---EcCC---cceEEEeccc---cceeEEE
Q 015198 174 L----------------RGLCCLSHHSS----TSVLACPGLQRGQVR-IE---HFGL---NMIKLINAHD---SHIACFT 223 (411)
Q Consensus 174 ~----------------~~~~~~~~~~~----~~~l~~~g~~dg~i~-i~---~~~~---~~~~~~~~~~---~~i~~l~ 223 (411)
+ ..+..++.+++ ++.|.+..-....++ |- ..+. ..++.+ +.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 1 12223333333 344444322221222 21 0111 112222 222 2333566
Q ss_pred ec-CCCCEEEEEcCCCeEEEEEECCC-C---ceEEEEeCCCCCcceEEEEeCCCCCEEEEE
Q 015198 224 LT-LDGLLLATASTRGTLIRIFNTVD-G---TRLQEVRRGVDRAEIYSIALSPNVQWLAVA 279 (411)
Q Consensus 224 ~s-p~g~~l~s~s~dg~~I~vwd~~~-~---~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 279 (411)
+. .+|.++++--.... |..|+..+ . +....+.....-..+..+.+..+|.+.+..
T Consensus 282 ~D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 75 67877777777777 99999765 1 222333321122356777777777655544
No 345
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=82.34 E-value=23 Score=30.48 Aligned_cols=189 Identities=11% Similarity=0.011 Sum_probs=84.2
Q ss_pred CCCEEEEEe-C---------CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCC
Q 015198 55 DYGCFAAGT-S---------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQS 124 (411)
Q Consensus 55 ~g~~la~g~-d---------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~ 124 (411)
++++++.|+ + ..+.+||..+........+....... .+....+..++++ +.+.......+.+||+.++
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRI-GVGVIDGHIYAVG-GSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTC-EEEEETTEEEEEC-CEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCcccc-EEEEECCEEEEEc-CCCCCcccccEEEECCCCC
Confidence 566666665 2 45778887654322222121111111 1111234444444 3221111256889998877
Q ss_pred cEEEEEe--ecCceeEEEEcCCeEEEE--E-----cCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCC
Q 015198 125 RCIGEFA--FRSDVRSVKLSRDRIVVV--L-----EHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQ 195 (411)
Q Consensus 125 ~~~~~~~--~~~~i~~~~~~~~~~~~~--~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 195 (411)
+-...-. ....-.++....+..+++ . -..+.+||+.+.+-...-..........+... ++.++++ |+.
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~-GG~ 224 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAA-GGY 224 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE-CCB
T ss_pred eEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEE-eCC
Confidence 5433222 111112233334444444 1 25688999877643321111111111122222 3345555 433
Q ss_pred C-----CeEEEEEcCCcceEEEec---cccceeEEEecCCCCEEEEEcCC-----CeEEEEEECCCCce
Q 015198 196 R-----GQVRIEHFGLNMIKLINA---HDSHIACFTLTLDGLLLATASTR-----GTLIRIFNTVDGTR 251 (411)
Q Consensus 196 d-----g~i~i~~~~~~~~~~~~~---~~~~i~~l~~sp~g~~l~s~s~d-----g~~I~vwd~~~~~~ 251 (411)
+ ..+.+++.....-..+.. .......+.+ ++++++.|+.+ .. +.+||+.+.+-
T Consensus 225 ~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~-v~~yd~~~~~W 290 (308)
T 1zgk_A 225 DGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDS-VECYDPDTDTW 290 (308)
T ss_dssp CSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCE-EEEEETTTTEE
T ss_pred CCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccce-EEEEcCCCCEE
Confidence 3 346666655443332221 1111122222 66777777654 34 78888877643
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=81.36 E-value=29 Score=30.86 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=39.1
Q ss_pred EEEEeccCCeE-EEEecCCCCCCCCCeEEEEECCCCcEEEEEe--------ecCceeEEEEcCC----eEEEE---E---
Q 015198 90 IVEMLFRCNIL-ALVGAGDNSQYPPTKVIIWDDHQSRCIGEFA--------FRSDVRSVKLSRD----RIVVV---L--- 150 (411)
Q Consensus 90 ~~~~~~~~~~~-~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~~--------~~~~i~~~~~~~~----~~~~~---~--- 150 (411)
...+.|.+++. ++++.. . +.|++++. .++....+. .......|+++|+ +.+.+ .
T Consensus 20 P~~i~~~pdG~~l~V~e~-~-----G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLR-G-----GELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp EEEEEECSTTCCEEEEET-T-----TEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred cEEEEEcCCCCEEEEEeC-C-----ceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 46778888887 777654 3 89999984 333211111 1345688999995 44444 1
Q ss_pred ----cCeEEEEEcCC
Q 015198 151 ----EHKIYVYSFVD 161 (411)
Q Consensus 151 ----dg~i~iwd~~~ 161 (411)
...|..|++..
T Consensus 93 ~g~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSD 107 (353)
T ss_dssp SSCEEEEEEEEEECT
T ss_pred CCCceeEEEEEEECC
Confidence 23566676643
No 347
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.19 E-value=29 Score=30.85 Aligned_cols=67 Identities=15% Similarity=0.073 Sum_probs=42.8
Q ss_pred EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcEEEE--Ee-----ecCceeEEEEcCC----eEEEE-----EcCe
Q 015198 90 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGE--FA-----FRSDVRSVKLSRD----RIVVV-----LEHK 153 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~--~~-----~~~~i~~~~~~~~----~~~~~-----~dg~ 153 (411)
...+.|.+++.++++.... |.|++++...++.... +. .......|+++|+ +.+.+ .++.
T Consensus 34 P~~ia~~pdG~llVter~~-----G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDE-----ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp EEEEEECTTSCEEEEETTT-----CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred ceEEEEcCCCcEEEEEecC-----CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 4577788888888876544 8999998665654221 11 2456789999985 44433 2456
Q ss_pred EEEEEcCC
Q 015198 154 IYVYSFVD 161 (411)
Q Consensus 154 i~iwd~~~ 161 (411)
|.-|.+..
T Consensus 109 v~R~~~~~ 116 (347)
T 3das_A 109 IVRMLYDE 116 (347)
T ss_dssp EEEEEBCT
T ss_pred EEEEEeCC
Confidence 66666543
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=77.91 E-value=11 Score=36.39 Aligned_cols=58 Identities=16% Similarity=0.127 Sum_probs=41.9
Q ss_pred eEEEecCCCCEEEEEcCC------------CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE
Q 015198 220 ACFTLTLDGLLLATASTR------------GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA 279 (411)
Q Consensus 220 ~~l~~sp~g~~l~s~s~d------------g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 279 (411)
-.|+|+|.|.+++.-..+ .. +.+.+..+++...-+... ..+.++.++|+||++.|++.
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~-~~~~~~~~g~~~rf~~~P-~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccce-EEEEeCCCCeEEEEEeCC-CCccCcCeeECCCCCEEEEE
Confidence 568999999976654332 23 666777778776655553 56799999999999877654
No 349
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=75.91 E-value=38 Score=29.19 Aligned_cols=110 Identities=15% Similarity=0.070 Sum_probs=50.9
Q ss_pred cCCCCEEEEEe-C----C-------cEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCC--CCCCCCCeEEE
Q 015198 53 NQDYGCFAAGT-S----C-------GFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGD--NSQYPPTKVII 118 (411)
Q Consensus 53 s~~g~~la~g~-d----g-------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~--d~~~~d~~i~v 118 (411)
..++++++.|+ . + .+.+||..+........+. .......+....+..++++|.. +.......+.+
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLP-SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBS-SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCC-cchhceeEEEECCEEEEEeCCcCCCCCcccceEEE
Confidence 35677777766 1 1 1566776654322211121 1111112222344455555421 10112367899
Q ss_pred EECCCCcEEEEEe--ecCceeEEEEcCCeEEEE--E------cCeEEEEEcCCce
Q 015198 119 WDDHQSRCIGEFA--FRSDVRSVKLSRDRIVVV--L------EHKIYVYSFVDLK 163 (411)
Q Consensus 119 wd~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~--~------dg~i~iwd~~~~~ 163 (411)
||..+++-...-. ....-.++....+..+++ . -..+.+||+.+.+
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 9988775432211 111222333344444444 2 2468999987764
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=74.64 E-value=21 Score=34.21 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=42.5
Q ss_pred ceeEEEecCCCCEEEEEcC------------CCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEE
Q 015198 218 HIACFTLTLDGLLLATAST------------RGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVA 279 (411)
Q Consensus 218 ~i~~l~~sp~g~~l~s~s~------------dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 279 (411)
....|.|+++|.+.+.... ... |..++..+++....+... ....++.++|+||++.|+++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~-v~~~dp~tGel~~fl~~P-~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQ-MLCADPATGEIRRFMVGP-IGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCE-EEEECTTTCCEEEEEECC-TTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCce-EEEEeCCCCeEEEEEeCC-CCccccCCEECCCCCEEEEE
Confidence 3457899999987773322 125 777787788876555432 34579999999999988765
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=74.20 E-value=41 Score=28.77 Aligned_cols=220 Identities=11% Similarity=-0.014 Sum_probs=108.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCc
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSR 125 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~ 125 (411)
.|..++......+++ . ||.|..|-.....++-.. . .....+..+.-.....+++. | +.|..|-.....
T Consensus 25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg~p-~-~~~~~i~~ia~G~~hs~~l~---~-----G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLTMP-A-ATQSGVDAIAAGNYHSLALK---D-----GEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTSCC-G-GGGSCCCEEEECSSEEEEEE---T-----TEEEEEECCTTS
T ss_pred CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCCCC-c-cCCCCEEEEEeCCCEEEEEE---C-----CEEEEeeCCCCC
Confidence 566666654433333 3 888888876543322111 0 11123444444444444442 4 888888754321
Q ss_pred EEEE-EeecCceeEEEEcCCeEEEEEcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc
Q 015198 126 CIGE-FAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF 204 (411)
Q Consensus 126 ~~~~-~~~~~~i~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~ 204 (411)
.+.. ......|..++.......++.+|.|+.|-......+-. .. .....+..++.... ..++.+ +|.|+.|-.
T Consensus 93 qlg~P~~~~~~v~~ia~G~~hs~al~~G~v~~wG~n~~gqlg~-~~-~~~~~i~~i~~G~~-~~~~l~---~G~v~~wG~ 166 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAWASYALKDGKVIAWGDDSDGQTTV-PA-EAQSGVTALDGGVY-TALAVK---NGGVIAWGD 166 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETTEEEEEETTEEEEEECCTTSTTSC-CG-GGGSSEEEEEECSS-EEEEEE---TTEEEEEEC
T ss_pred CCCCCcccCCCeEEEECcCCEEEEEeCCeEEEecCCCCCcCCC-Cc-cCCCCeEEEEcccC-EEEEEE---CCEEEEecC
Confidence 1110 11245688888877776666699999997644221110 00 01112344444333 233332 688888765
Q ss_pred CCc-ceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCC
Q 015198 205 GLN-MIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKG 283 (411)
Q Consensus 205 ~~~-~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg 283 (411)
... .+..-..-...|..|+...+.. ++. .||. |+.|-......+. +... ....|..++-..+ ..++.. ||
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~-v~~wG~n~~gqlg-~p~~-~~~~v~~i~~G~~-h~~al~--~g 237 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGK-VIAWGDNRYKQTT-VPTE-ALSGVSAIASGEW-YSLALK--NG 237 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTE-EEEEECCTTSTTC-CCGG-GGSSCCEEEECSS-CEEEEE--TT
T ss_pred CCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCe-EEEEECCCCCCCC-CCcc-cCCCceEEEcCCC-EEEEEE--CC
Confidence 431 1110011134566666544332 333 5888 9999654322111 1100 1235666765443 333333 99
Q ss_pred cEEEEEccc
Q 015198 284 TVHIFSLRV 292 (411)
Q Consensus 284 ~I~vwd~~~ 292 (411)
.|+.|=...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999986554
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=71.61 E-value=65 Score=29.94 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=34.2
Q ss_pred cceeEEEecCCCC-EEEEEcCCCeEEEEEECCCC---ceEEEEeCC-------CCCcceEEEEeCCC
Q 015198 217 SHIACFTLTLDGL-LLATASTRGTLIRIFNTVDG---TRLQEVRRG-------VDRAEIYSIALSPN 272 (411)
Q Consensus 217 ~~i~~l~~sp~g~-~l~s~s~dg~~I~vwd~~~~---~~~~~~~~~-------~~~~~v~~l~~spd 272 (411)
..-+.|+|.|+|. .|+++...|. |++++.... ..+..+... ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~-i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGY-VKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTE-EEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCce-EEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3456899999996 4445567898 999975322 122222210 01346789999996
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=70.64 E-value=68 Score=29.79 Aligned_cols=103 Identities=13% Similarity=0.085 Sum_probs=55.8
Q ss_pred eEEEccCCCce--EEEEecCCCCeEEEEEcCCcc----eEEEe---------ccccceeEEEecCC----CCEEEEEcC-
Q 015198 177 LCCLSHHSSTS--VLACPGLQRGQVRIEHFGLNM----IKLIN---------AHDSHIACFTLTLD----GLLLATAST- 236 (411)
Q Consensus 177 ~~~~~~~~~~~--~l~~~g~~dg~i~i~~~~~~~----~~~~~---------~~~~~i~~l~~sp~----g~~l~s~s~- 236 (411)
...+++.+++. ++++ ...|.|++.+.++.. +..+. ........|+|+|+ +.+.++-+.
T Consensus 16 P~~~a~~pdG~~rl~V~--er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFIL--EKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp EEEEECCSSSSCCEEEE--ETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred ceEEEECCCCCeEEEEE--eCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 34556666653 6654 367889887544321 12111 11456788999996 444443221
Q ss_pred -C----------CeEEEEEECCC----------CceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCC
Q 015198 237 -R----------GTLIRIFNTVD----------GTRLQEVRRGVDRAEIYSIALSPNVQWLAVASDK 282 (411)
Q Consensus 237 -d----------g~~I~vwd~~~----------~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~d 282 (411)
+ .. |.-|.+.. .+.+..+...........|+|.|||.+.++.+..
T Consensus 94 ~~~~~~~~~~~~~~-v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILR-VVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEE-EEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceE-EEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 13 44465532 1233344321122356889999999877766653
No 354
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.97 E-value=45 Score=32.91 Aligned_cols=73 Identities=15% Similarity=0.112 Sum_probs=45.1
Q ss_pred ceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCCCcceEEEEeCC---C-------CCEEEEEe--CCCcE
Q 015198 218 HIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSP---N-------VQWLAVAS--DKGTV 285 (411)
Q Consensus 218 ~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~sp---d-------g~~l~s~s--~dg~I 285 (411)
.|.++.+ +..+|++-+.|.. +|+|++++++++.+..-......... ...| . +.++++=. ..|..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~-LRiWsL~t~~lv~t~DL~~~~~~~~s-~L~~~~~~~~~Lrl~~~~lv~y~P~~~G~F 298 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCH-LKIWDLTSFTLIQDYDMVSQSDSDPS-HFRKVEAVGEYLSLYNNTLVTLLPLENGLF 298 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCE-EEEEETTTTEEEEEEETTTTSCCCSS-CCCCCCSCCCCEEESSSEEEEEETTTTCEE
T ss_pred eEEEecc--CCcEEEEEEcCCe-EEEEEcCCCceEEeeccccCcccccc-ccCcccCcchhHhheeeEEEEEecCCCCeE
Confidence 4555544 4679999999999 99999999998887765211100000 0111 1 24554333 56789
Q ss_pred EEEEccccc
Q 015198 286 HIFSLRVRV 294 (411)
Q Consensus 286 ~vwd~~~~~ 294 (411)
++|++....
T Consensus 299 k~~~l~~~~ 307 (729)
T 3f7f_A 299 QMGTLLVDS 307 (729)
T ss_dssp EEEEEEC--
T ss_pred EEEEEEEcC
Confidence 999996544
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=57.97 E-value=48 Score=34.17 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=32.3
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec
Q 015198 44 EIELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL 83 (411)
Q Consensus 44 ~~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~ 83 (411)
...|.+++..++..++++-+ |+.+|||++.+++.+....+
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 34678888888989998888 99999999998776665554
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=55.80 E-value=17 Score=37.49 Aligned_cols=75 Identities=9% Similarity=0.153 Sum_probs=47.6
Q ss_pred ceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeCCCC---CcceEEEEeCC-CCCEEEEE---eCCCcEEEEEc
Q 015198 218 HIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRRGVD---RAEIYSIALSP-NVQWLAVA---SDKGTVHIFSL 290 (411)
Q Consensus 218 ~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~~~~---~~~v~~l~~sp-dg~~l~s~---s~dg~I~vwd~ 290 (411)
.+.+++..++..++++-+.|+. +|+|++.+++++.+..-... ..........+ ++.+|++- ..+|..++|.+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~ 315 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKL 315 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEE
Confidence 4566777788889999999999 99999999999887643111 01111122223 23343332 24577888887
Q ss_pred ccc
Q 015198 291 RVR 293 (411)
Q Consensus 291 ~~~ 293 (411)
...
T Consensus 316 ~~~ 318 (950)
T 4gq2_M 316 NAN 318 (950)
T ss_dssp EEC
T ss_pred ecC
Confidence 543
No 357
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=52.66 E-value=91 Score=30.51 Aligned_cols=70 Identities=20% Similarity=0.307 Sum_probs=43.5
Q ss_pred ceeEEEe----cCCCC--EEEEEcCCCeEEEEEECCCCc-------eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc
Q 015198 218 HIACFTL----TLDGL--LLATASTRGTLIRIFNTVDGT-------RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 218 ~i~~l~~----sp~g~--~l~s~s~dg~~I~vwd~~~~~-------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
..+.|+. .++|+ .++.|+.+|..+++.-...+. .+.++.......+|..|.++++.++|++++.++.
T Consensus 413 ~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V 492 (667)
T 4gz8_A 413 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 492 (667)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEE
Confidence 3455554 24453 577899999844555433221 2333333335568999999999999999998874
Q ss_pred EEE
Q 015198 285 VHI 287 (411)
Q Consensus 285 I~v 287 (411)
++|
T Consensus 493 ~kV 495 (667)
T 4gz8_A 493 AQL 495 (667)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.94 E-value=21 Score=37.59 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=29.0
Q ss_pred ceEEEEeCCCCCEEEEEeCCCcEEEEEccccccCC
Q 015198 263 EIYSIALSPNVQWLAVASDKGTVHIFSLRVRVVGE 297 (411)
Q Consensus 263 ~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~~~~~ 297 (411)
.+.+++..++..+|++-+.|++++||++.++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 44556667788999999999999999999997654
No 359
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=50.92 E-value=1.2e+02 Score=25.98 Aligned_cols=108 Identities=10% Similarity=0.129 Sum_probs=51.4
Q ss_pred CCCEEEEEe-C-------CcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCCCcE
Q 015198 55 DYGCFAAGT-S-------CGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRC 126 (411)
Q Consensus 55 ~g~~la~g~-d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~~~~ 126 (411)
++++++.|+ + ..+.+||..+........+.. ...-..+....+..++++|..+.......+.+||+.+++-
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPI-KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSS-CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCC-cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 566777776 4 236777776544332222211 1111122223444555554322111125699999888754
Q ss_pred EEEEe--ecCceeEEEEcCCeEEEE--E-----cCeEEEEEcCCce
Q 015198 127 IGEFA--FRSDVRSVKLSRDRIVVV--L-----EHKIYVYSFVDLK 163 (411)
Q Consensus 127 ~~~~~--~~~~i~~~~~~~~~~~~~--~-----dg~i~iwd~~~~~ 163 (411)
...-. ....-.++....+..+++ . -..+.+||+.+.+
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 43322 111222333444444444 1 2457788987654
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=47.41 E-value=18 Score=38.18 Aligned_cols=39 Identities=8% Similarity=0.086 Sum_probs=32.4
Q ss_pred ceeEEEecCCCCEEEEEcCCCeEEEEEECCCCceEEEEeC
Q 015198 218 HIACFTLTLDGLLLATASTRGTLIRIFNTVDGTRLQEVRR 257 (411)
Q Consensus 218 ~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~~~~~~~~~ 257 (411)
.+.+++..++..++++-+.|+. +|||++.+++++.+..-
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEeech
Confidence 3445566678889999999999 99999999999888653
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=40.80 E-value=2e+02 Score=25.79 Aligned_cols=83 Identities=6% Similarity=-0.008 Sum_probs=52.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEe---C-------------CcEEEEecCCC--cceEEeecCC----CCEEEEEEecc---C
Q 015198 43 DEIELISVSWNQDYGCFAAGT---S-------------CGFRIYNCEPF--KETFRRDLKS----GGFRIVEMLFR---C 97 (411)
Q Consensus 43 h~~~V~~l~~s~~g~~la~g~---d-------------g~i~iw~~~~~--~~~~~~~~~~----~~~~~~~~~~~---~ 97 (411)
+--.|..+...+++++-+.-+ + -.|.+||+.+. +.+....|.. .......+... +
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 445688888888887665432 2 13678999987 6655555521 12234444433 1
Q ss_pred -----CeEEEEecCCCCCCCCCeEEEEECCCCcEEEEE
Q 015198 98 -----NILALVGAGDNSQYPPTKVIIWDDHQSRCIGEF 130 (411)
Q Consensus 98 -----~~~~l~s~~~d~~~~d~~i~vwd~~~~~~~~~~ 130 (411)
++.+.++-... ..|.|+|+.+++.-+..
T Consensus 165 ~~~c~~~~aYItD~~~-----~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 165 KGDCSETFVYITNFLR-----GALFIYDHKKQDSWNVT 197 (381)
T ss_dssp TTTSCSEEEEEEETTT-----TEEEEEETTTTEEEEEE
T ss_pred CCCCCccEEEEEcCCC-----CcEEEEECCCCcEEEEc
Confidence 46666665555 89999999998776554
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=39.22 E-value=98 Score=30.56 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=28.1
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCcEEEEecCCCcceEEeec
Q 015198 45 IELISVSWNQDYGCFAAGT-SCGFRIYNCEPFKETFRRDL 83 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~-dg~i~iw~~~~~~~~~~~~~ 83 (411)
..|.++.+. ..++++-+ |..+|+|++.++..+....+
T Consensus 222 ~~Is~~~~~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456666553 66888877 99999999999776666665
No 363
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=37.95 E-value=1.5e+02 Score=24.76 Aligned_cols=32 Identities=22% Similarity=0.223 Sum_probs=23.4
Q ss_pred cceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 262 AEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 262 ~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
..|.++....++.+|+.++..|.++...+..-
T Consensus 84 e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~ 115 (256)
T 1zvt_A 84 ATVDHMLMESDDQKLLMASDAGYGFVCTFNDL 115 (256)
T ss_dssp CCEEEEECCCTTCEEEEEBTTSEEEEEEGGGG
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHh
Confidence 35666644345677888999999999988664
No 364
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=36.92 E-value=74 Score=29.86 Aligned_cols=70 Identities=20% Similarity=0.307 Sum_probs=42.7
Q ss_pred ceeEEEecC----CCC--EEEEEcCCCeEEEEEECCCCc-------eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc
Q 015198 218 HIACFTLTL----DGL--LLATASTRGTLIRIFNTVDGT-------RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT 284 (411)
Q Consensus 218 ~i~~l~~sp----~g~--~l~s~s~dg~~I~vwd~~~~~-------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~ 284 (411)
..++|+... ++. .+..|..+|...++.-...+. .+.++.......+|..|.++++..+|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 345665542 243 567788899844554433221 2333433213468999999999999999998875
Q ss_pred EEE
Q 015198 285 VHI 287 (411)
Q Consensus 285 I~v 287 (411)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 365
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=33.77 E-value=2.6e+02 Score=25.03 Aligned_cols=232 Identities=9% Similarity=0.062 Sum_probs=110.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCcEEEEecCCCcce---------EEeecC-CCCEEEEEEeccCCeEEEEecCCCCCCCCC
Q 015198 45 IELISVSWNQDYGCFAAGTSCGFRIYNCEPFKET---------FRRDLK-SGGFRIVEMLFRCNILALVGAGDNSQYPPT 114 (411)
Q Consensus 45 ~~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~ 114 (411)
..|..|+.-... .++...++.|..|-.....++ ....+. .....+..+....+..++++.. + +
T Consensus 16 ~~v~~ia~G~~h-s~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~-g-----g 88 (406)
T 4d9s_A 16 RKVLIISAGASH-SVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQS-G-----M 88 (406)
T ss_dssp CCEEEEEECSSE-EEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETT-T-----T
T ss_pred cceEEEecCCCe-EEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECC-C-----C
Confidence 456666654332 233334888888865432211 001110 1122455555444444444322 1 5
Q ss_pred eEEEEECCC------C---cEEEEEe----ecCceeEEEEcCCeEEEE-EcCeEEEEEcCCc-ee---------e-EEEe
Q 015198 115 KVIIWDDHQ------S---RCIGEFA----FRSDVRSVKLSRDRIVVV-LEHKIYVYSFVDL-KL---------L-HQIE 169 (411)
Q Consensus 115 ~i~vwd~~~------~---~~~~~~~----~~~~i~~~~~~~~~~~~~-~dg~i~iwd~~~~-~~---------~-~~~~ 169 (411)
.|..|-... + ....... ....|..++......+++ .+|.|+.|-.... ++ . ..+.
T Consensus 89 ~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 89 EVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp EEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred EEEEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 899996322 1 1111111 133688888877777666 7999999975321 11 0 1111
Q ss_pred ccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCC--c--------ce--EEEec-cccceeEEEecCCCCEEEEEcC
Q 015198 170 TLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGL--N--------MI--KLINA-HDSHIACFTLTLDGLLLATAST 236 (411)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~--~--------~~--~~~~~-~~~~i~~l~~sp~g~~l~s~s~ 236 (411)
. .....+..++.... ..++.+ .+|.|+.|-... + .. ..+.. ....|..++.. ....+.-..
T Consensus 169 ~-~~~~~i~~va~G~~-hs~alt--~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~ 242 (406)
T 4d9s_A 169 A-FEGIRIKMVAAGAE-HTAAVT--EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSY 242 (406)
T ss_dssp G-GTTCCEEEEEECSS-EEEEEE--TTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEET
T ss_pred c-cCCCcEEEEecCCC-eEEEEe--CCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcC
Confidence 1 11123444444333 233333 688898876432 1 00 01111 12345555443 234444567
Q ss_pred CCeEEEEEECCCC-c---------e-EEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEEEcccc
Q 015198 237 RGTLIRIFNTVDG-T---------R-LQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIFSLRVR 293 (411)
Q Consensus 237 dg~~I~vwd~~~~-~---------~-~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vwd~~~~ 293 (411)
+|. |+.|-.... + . ...+.. .....|..|+-. ..+.+.-..||.|+.|=....
T Consensus 243 ~G~-v~~wG~n~~GqlG~g~~~~~~~p~~v~~-~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~ 306 (406)
T 4d9s_A 243 SGA-LYTYGWSKYGQLGHGDLEDHLIPHKLEA-LSNSFISQISGG--WRHTMALTSDGKLYGWGWNKF 306 (406)
T ss_dssp TCC-EEEEECCTTSTTCSSSCCCEEEEEECGG-GTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTT
T ss_pred CCC-EEEeeCCCCCCCCCCCCcCccccEEecc-cCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCC
Confidence 888 888864321 1 1 111111 112246666543 344555678999999976553
No 366
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=32.08 E-value=1e+02 Score=19.74 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=20.5
Q ss_pred CCEEEEEEeCCcEEEEEEecCCCCcEEEe
Q 015198 370 QNTVVIVSMDGSFYRCSFDPVHGGEMLQQ 398 (411)
Q Consensus 370 ~~~~~~~~~dg~~~~~~~~~~~~~~~~~~ 398 (411)
++.+.+.- +|.+.||.+++..+ +..+.
T Consensus 29 ~nhFgv~e-~g~iKIykyde~tN-eI~Lk 55 (72)
T 3kvp_A 29 HNHFGVME-DGYIKIYEYNESRN-EVKLK 55 (72)
T ss_dssp TTEEEEEE-TTEEEEEEEETTTT-EEEEE
T ss_pred CCEEEEEe-CCEEEEEEeCCCCC-eEEEE
Confidence 36666666 99999999999775 66553
No 367
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=30.78 E-value=2.4e+02 Score=23.76 Aligned_cols=181 Identities=10% Similarity=-0.033 Sum_probs=91.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCcEEEEecCCCcceEEeecCCCCEEEEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC-C
Q 015198 46 ELISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ-S 124 (411)
Q Consensus 46 ~V~~l~~s~~g~~la~g~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~-~ 124 (411)
.|..++......+++ .||.|..|-.....++-.- . .-...+..+.-..+..++++ + +.|..|-... +
T Consensus 64 ~i~~ia~G~~hs~~l--~~G~v~~wG~n~~Gqlg~P-~-~~~~~v~~ia~G~~hs~al~---~-----G~v~~wG~n~~g 131 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--KDGEVIAWGGNEDGQTTVP-A-EARSGVDAIAAGAWASYALK---D-----GKVIAWGDDSDG 131 (282)
T ss_dssp CCCEEEECSSEEEEE--ETTEEEEEECCTTSTTCCC-G-GGSSSEEEEEEETTEEEEEE---T-----TEEEEEECCTTS
T ss_pred CEEEEEeCCCEEEEE--ECCEEEEeeCCCCCCCCCC-c-ccCCCeEEEECcCCEEEEEe---C-----CeEEEecCCCCC
Confidence 455555544333333 3777777765543321110 0 01124555555555555555 3 8999997544 2
Q ss_pred cEEEEEeecCceeEEEEcCCeEEEEEcCeEEEEEcCCceeeEEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEc
Q 015198 125 RCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHF 204 (411)
Q Consensus 125 ~~~~~~~~~~~i~~~~~~~~~~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~ 204 (411)
+.-........|..++......+++.||.|+.|-......+. +... ....+..++.... ..++. .+|.|+.|-.
T Consensus 132 qlg~~~~~~~~i~~i~~G~~~~~~l~~G~v~~wG~n~~gqlg-~p~~-~~~~v~~i~~G~~-hs~al---~~G~v~~wG~ 205 (282)
T 3qhy_B 132 QTTVPAEAQSGVTALDGGVYTALAVKNGGVIAWGDNYFGQTT-VPAE-AQSGVDDVAGGIF-HSLAL---KDGKVIAWGD 205 (282)
T ss_dssp TTSCCGGGGSSEEEEEECSSEEEEEETTEEEEEECCTTSTTS-CCGG-GGSSEEEEEECSS-EEEEE---ETTEEEEEEC
T ss_pred cCCCCccCCCCeEEEEcccCEEEEEECCEEEEecCCCCCCCC-Ccee-cCCCeEEEEecCC-EEEEE---ECCeEEEEEC
Confidence 211111134567888877777766689999999764422111 0000 0113444444333 23332 4788888765
Q ss_pred CCc-ceEEEeccccceeEEEecCCCCEEEEEcCCCeEEEEEECCC
Q 015198 205 GLN-MIKLINAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVD 248 (411)
Q Consensus 205 ~~~-~~~~~~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~ 248 (411)
+.. .+-.-......|..|+...... ++.. ||. |+.|-...
T Consensus 206 n~~gqlg~p~~~~~~v~~i~~G~~h~-~al~--~g~-v~~wG~n~ 246 (282)
T 3qhy_B 206 NRYKQTTVPTEALSGVSAIASGEWYS-LALK--NGK-VIAWGSSR 246 (282)
T ss_dssp CTTSTTCCCGGGGSSCCEEEECSSCE-EEEE--TTE-EEEESTTC
T ss_pred CCCCCCCCCcccCCCceEEEcCCCEE-EEEE--CCE-EEEecCCC
Confidence 431 1110011123566776554443 3333 888 99996544
No 368
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=30.06 E-value=1.2e+02 Score=28.68 Aligned_cols=69 Identities=14% Similarity=0.192 Sum_probs=42.1
Q ss_pred ceeEEEecCCC--CEEEEEcCCCeEEEEEECCCC----ceEEEEeCCCCCcceE-EEEeCCCCCEEEEEeCCCcEEE
Q 015198 218 HIACFTLTLDG--LLLATASTRGTLIRIFNTVDG----TRLQEVRRGVDRAEIY-SIALSPNVQWLAVASDKGTVHI 287 (411)
Q Consensus 218 ~i~~l~~sp~g--~~l~s~s~dg~~I~vwd~~~~----~~~~~~~~~~~~~~v~-~l~~spdg~~l~s~s~dg~I~v 287 (411)
.+++|+....+ ..++.|..+|. |.-..+... ..+.++.......+|. .|.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~-l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGK-LKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSE-EEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCe-EEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 45566655433 35778899998 443334322 1233444322245785 8999999999999988764443
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=29.98 E-value=4.1e+02 Score=26.14 Aligned_cols=177 Identities=13% Similarity=0.085 Sum_probs=88.4
Q ss_pred CeEEEEECCCCcEEEE-Eee--cC------ceeEEEEcC-CeEEEEE------------cCeEEEEEcCCc--eeeEEEe
Q 015198 114 TKVIIWDDHQSRCIGE-FAF--RS------DVRSVKLSR-DRIVVVL------------EHKIYVYSFVDL--KLLHQIE 169 (411)
Q Consensus 114 ~~i~vwd~~~~~~~~~-~~~--~~------~i~~~~~~~-~~~~~~~------------dg~i~iwd~~~~--~~~~~~~ 169 (411)
..++++|+.+++.+.. +.. +. ....++|.. ++.++.. ...|+.|.+.+. +-...+.
T Consensus 156 ~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~ 235 (711)
T 4hvt_A 156 MFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFE 235 (711)
T ss_dssp EEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEE
T ss_pred eEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEec
Confidence 7899999999987631 110 00 112336653 4444431 256899988654 2333455
Q ss_pred ccCCCcceE-EEccCCCce---EEEEec-C-CCCeEEEEEcCC--cceEEEeccccceeEEEecCCCCEEEEE-------
Q 015198 170 TLANLRGLC-CLSHHSSTS---VLACPG-L-QRGQVRIEHFGL--NMIKLINAHDSHIACFTLTLDGLLLATA------- 234 (411)
Q Consensus 170 ~~~~~~~~~-~~~~~~~~~---~l~~~g-~-~dg~i~i~~~~~--~~~~~~~~~~~~i~~l~~sp~g~~l~s~------- 234 (411)
.......+. ....++... .++..+ + ....+++.+... .....+...... .+..+.++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 313 (711)
T 4hvt_A 236 VPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSDA--TLQGSFKEYVFWLLRSDWKFK 313 (711)
T ss_dssp CCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTTC--EEEEEETTEEEEECSSCEEET
T ss_pred cCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCcc--eEeeeECCEEEEEECcccccc
Confidence 444433222 223344332 233322 1 223444433331 222222222211 12334466555532
Q ss_pred ---cCCCeEEEEEECCCC-------ceEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCc--EEEEEccccc
Q 015198 235 ---STRGTLIRIFNTVDG-------TRLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGT--VHIFSLRVRV 294 (411)
Q Consensus 235 ---s~dg~~I~vwd~~~~-------~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~--I~vwd~~~~~ 294 (411)
...+. |.+.|+.++ .....+..+.....+..+.|..+ .++++...++. |.++++.+++
T Consensus 314 ~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~ 383 (711)
T 4hvt_A 314 SHNIKAGS-LVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQ 383 (711)
T ss_dssp TEEECTTC-EEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTE
T ss_pred cccCCCCe-EEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCc
Confidence 13566 888888763 22333333224557888999876 56777777774 6677766553
No 370
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=29.82 E-value=3.7e+02 Score=25.62 Aligned_cols=75 Identities=12% Similarity=0.013 Sum_probs=42.4
Q ss_pred eEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEEecccc---ceeEEEecCCCCEEEEEcC--------------CCe
Q 015198 177 LCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDS---HIACFTLTLDGLLLATAST--------------RGT 239 (411)
Q Consensus 177 ~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~~~~~~---~i~~l~~sp~g~~l~s~s~--------------dg~ 239 (411)
.+.+.-.+++.++...| ..+...+..++.+..+....+ .-..+...|+|+.|+.+.. +..
T Consensus 209 l~~~~g~~nG~l~~g~G---~~i~elD~~Gkvv~~~~lp~g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vdD~ 285 (571)
T 3elq_A 209 LMGIRETPRGTFTAVQG---QHWYEFDMMGQVLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTIRDH 285 (571)
T ss_dssp CEEEEECTTSCEEEEEB---TEEEEECTTCCEEEEEECCTTEECBCSCEEECTTSCEEEEEEETTEECTTSCEECCCSCE
T ss_pred EEEEEecCCCCEEEecC---cEEEEECCCCcEEEEEECCCCccccccceEEcCCCcEEEEEecccccCCCCcccceeccE
Confidence 44555555665554322 345556777777666543221 1234566789998875531 334
Q ss_pred EEEEEECCCCceEEEEe
Q 015198 240 LIRIFNTVDGTRLQEVR 256 (411)
Q Consensus 240 ~I~vwd~~~~~~~~~~~ 256 (411)
|...| .+|+.+.++.
T Consensus 286 -I~EVD-~tGeVv~eW~ 300 (571)
T 3elq_A 286 -ILEVD-KSGRVVDVWD 300 (571)
T ss_dssp -EEEEC-TTSCEEEEEE
T ss_pred -EEEEC-CCCCEEEEEE
Confidence 66667 6777666553
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=26.27 E-value=2.9e+02 Score=23.25 Aligned_cols=73 Identities=22% Similarity=0.246 Sum_probs=45.7
Q ss_pred ccceeEEEecC-CCCEEEEEcCCCeEEEEEECCCCc------eEEEEeCCCCCcceEEEEeCCCCCEEEEEeCCCcEEEE
Q 015198 216 DSHIACFTLTL-DGLLLATASTRGTLIRIFNTVDGT------RLQEVRRGVDRAEIYSIALSPNVQWLAVASDKGTVHIF 288 (411)
Q Consensus 216 ~~~i~~l~~sp-~g~~l~s~s~dg~~I~vwd~~~~~------~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~dg~I~vw 288 (411)
...|..+.... +..+++..+.+|. |+-..+..-. ....+. ....+..+........|+..+..|.++.+
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~-iKr~~l~~~~~~~~G~~~i~lk---egD~l~~~~~~~~~~~ill~T~~G~~~r~ 142 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGY-VKKIPLAEFEYKAQGMPIIKLT---EGDEVVSIASSVDETHILLFTKKGRVARF 142 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSE-EEEEEGGGTTTCSTTEECSCCC---TTCCEEEEEECCSSCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCE-EEEEEHHHhhhhcCCeEEEecC---CCCEEEEEEEeCCCCEEEEEECCCEEEEE
Confidence 34454443321 4568889999999 9888764421 111222 22355555555566688889999988888
Q ss_pred Eccc
Q 015198 289 SLRV 292 (411)
Q Consensus 289 d~~~ 292 (411)
++..
T Consensus 143 ~~~e 146 (276)
T 3no0_A 143 SVRE 146 (276)
T ss_dssp EGGG
T ss_pred Ehhh
Confidence 7655
No 372
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=25.80 E-value=4.4e+02 Score=25.15 Aligned_cols=154 Identities=13% Similarity=0.096 Sum_probs=85.4
Q ss_pred eEEEEECCCCcEEEEEeec---Cce---------------eEEEE-cCCeEEE-E-----EcCeEEEEEcCCceeeEEEe
Q 015198 115 KVIIWDDHQSRCIGEFAFR---SDV---------------RSVKL-SRDRIVV-V-----LEHKIYVYSFVDLKLLHQIE 169 (411)
Q Consensus 115 ~i~vwd~~~~~~~~~~~~~---~~i---------------~~~~~-~~~~~~~-~-----~dg~i~iwd~~~~~~~~~~~ 169 (411)
.|.++|=.+|+.+..+... ..+ .++++ .-+...+ + ....|..||.+.+++...+.
T Consensus 230 yL~vfdG~TG~~l~~~~~~p~rg~~~~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~ 309 (591)
T 2zux_A 230 YLTVFQGSTGKELVTANFEPARGNVSDWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWT 309 (591)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCCGGGGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEE
T ss_pred EEEEEeCCCCCEEecccCCCCCCcccccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEE
Confidence 5899998899998887632 212 23332 2221122 2 12458889988877654442
Q ss_pred ccCCC-----------cceEEEccCCCceEEEEecCCCCeEEEEEcCCcceEEE-eccccceeEEEecCC--CCEEEEEc
Q 015198 170 TLANL-----------RGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLI-NAHDSHIACFTLTLD--GLLLATAS 235 (411)
Q Consensus 170 ~~~~~-----------~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~~~~~~-~~~~~~i~~l~~sp~--g~~l~s~s 235 (411)
..... ........+.|++-=++.|+. +.+.+++.+... .+|...+....|.|+ |..++.+.
T Consensus 310 ~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD~dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~ 384 (591)
T 2zux_A 310 LDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVDHDGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVH 384 (591)
T ss_dssp EETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EECTTSCEEEECSCCCCSCEEEECCCTTSSSCEEEEEC
T ss_pred ecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EECCCCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEe
Confidence 22110 122233334443322222321 122333333222 378888888889887 44666665
Q ss_pred CC----CeEEEEEECCCCceEEEEeCCCCCcceEEEEeCCCCC
Q 015198 236 TR----GTLIRIFNTVDGTRLQEVRRGVDRAEIYSIALSPNVQ 274 (411)
Q Consensus 236 ~d----g~~I~vwd~~~~~~~~~~~~~~~~~~v~~l~~spdg~ 274 (411)
++ .. ..+.|..+|+.+.......+.+......|.|+..
T Consensus 385 E~~~~~~G-~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~p 426 (591)
T 2zux_A 385 EDKNAKYG-LSFRDAATGKILWGVYAGKDVGRGMAADIDPRYP 426 (591)
T ss_dssp CCTTSSCS-EEEEETTTCCEEEEECCSSCCCCEEEECCCTTSS
T ss_pred cCCCCCCc-cEEEECCCCcEEEEcCCCCCCCceeEEecCCCCC
Confidence 54 14 6678999999998887544555666666777643
No 373
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=25.14 E-value=4.9e+02 Score=25.39 Aligned_cols=70 Identities=19% Similarity=0.312 Sum_probs=44.7
Q ss_pred ceeEEEec----CCCC---EEEEEcCCCeEEEEEECCCCc-eEEEEeCCCCCcceEEEEeCCCC--CEEEEEeCCCcEEE
Q 015198 218 HIACFTLT----LDGL---LLATASTRGTLIRIFNTVDGT-RLQEVRRGVDRAEIYSIALSPNV--QWLAVASDKGTVHI 287 (411)
Q Consensus 218 ~i~~l~~s----p~g~---~l~s~s~dg~~I~vwd~~~~~-~~~~~~~~~~~~~v~~l~~spdg--~~l~s~s~dg~I~v 287 (411)
..+.|+.. .+++ .++.|..+|..+++....... .+.++..-....+|..|.++++. .+|++++.++.++|
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 35666653 3443 678899999844555554432 22333332234588899999988 89999988875554
No 374
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=22.16 E-value=4.2e+02 Score=23.65 Aligned_cols=188 Identities=6% Similarity=0.000 Sum_probs=93.0
Q ss_pred EEEEeccCCeEEEEecCCCCCCCCCeEEEEECCC-Cc------------EEEEEeecCceeEEEEcCCeEEEE-EcCeEE
Q 015198 90 IVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQ-SR------------CIGEFAFRSDVRSVKLSRDRIVVV-LEHKIY 155 (411)
Q Consensus 90 ~~~~~~~~~~~~l~s~~~d~~~~d~~i~vwd~~~-~~------------~~~~~~~~~~i~~~~~~~~~~~~~-~dg~i~ 155 (411)
+..+.......++++. +|.|..|-... ++ ....+.....|..++......+++ .||.|+
T Consensus 77 v~~va~G~~h~~~l~~-------~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G~~hs~al~~~G~v~ 149 (423)
T 3mvd_K 77 AVDISAGGMHNLVLTK-------SGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVF 149 (423)
T ss_dssp EEEEEECSSEEEEEET-------TSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEECSSEEEEEETTSCEE
T ss_pred ceEEeeCCCeEEEEeC-------CCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcCcCeEEEEeCCCeEE
Confidence 4555544444444442 38898886432 11 111122345778888877777777 799999
Q ss_pred EEEc--C-Cceee--------EEEeccCCCcceEEEccCCCceEEEEecCCCCeEEEEEcCCc-----------------
Q 015198 156 VYSF--V-DLKLL--------HQIETLANLRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLN----------------- 207 (411)
Q Consensus 156 iwd~--~-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~dg~i~i~~~~~~----------------- 207 (411)
.|-. . .+++- ..... .....+..++.... ..++.+ .+|.|+.|-.+..
T Consensus 150 ~wG~~~n~~GqlG~~~~~~~~~p~~~-~~~~~i~~va~G~~-hs~alt--~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 225 (423)
T 3mvd_K 150 AWGSFRDSHGNMGLTIDGNKRTPIDL-MEGTVCCSIASGAD-HLVILT--TAGKVFTVGCAEQGQLGRLSERSISGEGRR 225 (423)
T ss_dssp EEECEECSSSEEESBTTBCEEEEEES-STTCCEEEEEECSS-EEEEEE--TTSCEEEEECCTTSTTSSCCTTTTTSCSTT
T ss_pred EEeCCCCCCCCcCcCCCCCCceeeEe-cCCCcEEEEecCCC-eEEEEe--cCCeEEEeeCCcCCccCCCccccccccccc
Confidence 9985 2 22211 11111 11123444444333 333433 6888888854320
Q ss_pred ------ceEEE-eccccceeEEEecCCCCEEEEEcCCCeEEEEEECCCC----------c-eEEEEeCCCCCcceEEEEe
Q 015198 208 ------MIKLI-NAHDSHIACFTLTLDGLLLATASTRGTLIRIFNTVDG----------T-RLQEVRRGVDRAEIYSIAL 269 (411)
Q Consensus 208 ------~~~~~-~~~~~~i~~l~~sp~g~~l~s~s~dg~~I~vwd~~~~----------~-~~~~~~~~~~~~~v~~l~~ 269 (411)
....+ ......|..++.... ..++.-..++. |+.|-.... . ....... ....|..|+-
T Consensus 226 ~~~~~~~p~~v~~~~~~~v~~i~~g~~-~~~~~~~~~g~-v~~wG~n~~gqlg~~~~~~~~~~~p~~~--~~~~v~~ia~ 301 (423)
T 3mvd_K 226 GKRDLLRPTQLIITRAKPFEAIWATNY-CTFMRESQTQV-IWATGLNNFKQLAHETKGKEFALTPIKT--ELKDIRHIAG 301 (423)
T ss_dssp TTTTTSSCEEECCTTCCCEEEEEEETT-EEEEEETTTCC-EEEEEECTTCTTSSCCTTCSEEEEEEEE--CCCSEEEEEE
T ss_pred ccccccCCeEEeecCCccEEEEEECCc-EEEEEECCCCe-EEEEeCCCCCcCCCCCCCCceeeeeEEc--CCCCeEEEEc
Confidence 00111 111233444443322 22333357888 888854321 1 1111111 1235666654
Q ss_pred CCCCCEEEEEeCCCcEEEEEccccc
Q 015198 270 SPNVQWLAVASDKGTVHIFSLRVRV 294 (411)
Q Consensus 270 spdg~~l~s~s~dg~I~vwd~~~~~ 294 (411)
.. .+.+.-..||.|+.|=.....
T Consensus 302 G~--~ht~alt~~G~v~~wG~n~~G 324 (423)
T 3mvd_K 302 GQ--HHTVILTTDLKCSVVGRPEYG 324 (423)
T ss_dssp CS--SEEEEEETTCCEEEEECCGGG
T ss_pred cc--CeEEEEeCCCcEEEEECCCCC
Confidence 33 445566789999999765543
Done!