Query 015201
Match_columns 411
No_of_seqs 184 out of 1370
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:27:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4exq_A UPD, URO-D, uroporphyri 100.0 2.1E-78 7.3E-83 602.9 30.3 349 48-396 4-361 (368)
2 1r3s_A URO-D, uroporphyrinogen 100.0 3.6E-73 1.2E-77 566.4 33.4 347 48-395 9-362 (367)
3 3cyv_A URO-D, UPD, uroporphyri 100.0 1.2E-71 4.2E-76 553.0 32.5 344 52-396 3-351 (354)
4 1j93_A UROD, uroporphyrinogen 100.0 1.1E-70 3.6E-75 546.1 35.2 342 53-395 10-353 (353)
5 2eja_A URO-D, UPD, uroporphyri 100.0 1.1E-70 3.9E-75 542.7 34.1 335 53-395 2-337 (338)
6 2inf_A URO-D, UPD, uroporphyri 100.0 5E-70 1.7E-74 542.3 34.4 339 52-395 11-351 (359)
7 4ay7_A Methylcobalamin\: coenz 100.0 9.5E-67 3.3E-71 516.6 33.3 328 47-394 7-347 (348)
8 2nq5_A 5-methyltetrahydroptero 99.7 4.7E-17 1.6E-21 174.4 13.1 205 172-396 524-744 (755)
9 1u1j_A 5-methyltetrahydroptero 99.7 1.2E-16 4.1E-21 171.7 14.6 204 172-395 539-759 (765)
10 1ypx_A Putative vitamin-B12 in 99.7 4.9E-16 1.7E-20 154.3 12.8 211 172-398 116-369 (375)
11 3rpd_A Methionine synthase (B1 99.5 8.6E-14 3E-18 136.9 16.6 198 174-394 127-350 (357)
12 1t7l_A 5-methyltetrahydroptero 99.3 8.2E-12 2.8E-16 132.3 14.6 201 173-394 544-761 (766)
13 1u1j_A 5-methyltetrahydroptero 99.2 6.7E-11 2.3E-15 127.2 15.9 184 171-375 136-331 (765)
14 2nq5_A 5-methyltetrahydroptero 99.2 9.1E-11 3.1E-15 125.8 15.5 178 171-374 136-321 (755)
15 3ppg_A 5-methyltetrahydroptero 99.1 3.7E-10 1.3E-14 120.2 12.0 200 174-394 572-786 (789)
16 3ppg_A 5-methyltetrahydroptero 97.2 0.0023 7.8E-08 68.3 12.8 172 189-378 186-368 (789)
17 1t7l_A 5-methyltetrahydroptero 95.9 0.18 6.3E-06 53.6 16.3 133 227-374 203-343 (766)
18 4djd_D C/Fe-SP, corrinoid/iron 95.8 0.11 3.7E-06 49.8 12.9 151 223-391 68-235 (323)
19 1tx2_A DHPS, dihydropteroate s 95.3 0.66 2.3E-05 43.8 16.2 150 235-393 63-226 (297)
20 1aj0_A DHPS, dihydropteroate s 94.5 3.1 0.00011 38.9 19.4 151 235-393 38-207 (282)
21 2yci_X 5-methyltetrahydrofolat 94.2 1.1 3.8E-05 41.7 14.5 147 235-393 34-192 (271)
22 2vp8_A Dihydropteroate synthas 93.7 3 0.0001 39.6 16.8 145 235-386 65-233 (318)
23 2qjg_A Putative aldolase MJ040 93.7 2.5 8.4E-05 38.9 16.1 139 240-393 104-260 (273)
24 2ftp_A Hydroxymethylglutaryl-C 93.5 0.28 9.4E-06 46.5 9.3 146 234-393 29-200 (302)
25 4hb7_A Dihydropteroate synthas 92.7 6.2 0.00021 36.5 17.4 152 235-396 30-198 (270)
26 1eye_A DHPS 1, dihydropteroate 92.5 6.8 0.00023 36.5 19.3 153 235-395 29-204 (280)
27 3glc_A Aldolase LSRF; TIM barr 92.4 1 3.5E-05 42.5 11.3 138 241-392 131-279 (295)
28 1w8s_A FBP aldolase, fructose- 92.3 1.3 4.3E-05 41.0 11.7 139 240-392 97-253 (263)
29 1ydo_A HMG-COA lyase; TIM-barr 91.8 0.35 1.2E-05 46.0 7.3 146 234-393 27-198 (307)
30 3ewb_X 2-isopropylmalate synth 91.5 2.2 7.5E-05 40.1 12.6 141 234-393 26-191 (293)
31 2vc6_A MOSA, dihydrodipicolina 91.4 7.6 0.00026 36.2 16.2 122 173-340 56-189 (292)
32 1ur4_A Galactanase; hydrolase, 91.3 2.3 8E-05 41.8 13.0 166 228-395 134-345 (399)
33 3bg3_A Pyruvate carboxylase, m 90.8 5.8 0.0002 42.0 16.1 87 235-330 261-359 (718)
34 1vli_A Spore coat polysacchari 90.8 0.63 2.2E-05 45.5 8.1 144 238-393 47-216 (385)
35 2ekc_A AQ_1548, tryptophan syn 90.6 1.4 4.8E-05 40.6 10.1 109 275-396 4-149 (262)
36 3rmj_A 2-isopropylmalate synth 90.6 2.7 9.2E-05 40.9 12.5 141 234-393 33-198 (370)
37 2ztj_A Homocitrate synthase; ( 90.5 2.3 7.7E-05 41.6 12.0 141 234-393 24-185 (382)
38 1ydn_A Hydroxymethylglutaryl-C 90.5 1.1 3.9E-05 41.9 9.5 146 234-393 25-196 (295)
39 1to3_A Putative aldolase YIHT; 90.3 3.1 0.0001 39.3 12.3 139 241-393 114-289 (304)
40 3f4w_A Putative hexulose 6 pho 90.1 0.76 2.6E-05 40.6 7.6 126 240-392 69-209 (211)
41 1fob_A Beta-1,4-galactanase; B 89.9 14 0.00046 35.2 16.8 126 228-374 105-251 (334)
42 3tr9_A Dihydropteroate synthas 89.9 11 0.00037 35.6 15.7 153 235-395 49-229 (314)
43 3o63_A Probable thiamine-phosp 89.7 2.7 9.3E-05 38.3 11.1 98 238-352 46-150 (243)
44 3qze_A DHDPS, dihydrodipicolin 89.7 14 0.00047 34.9 18.2 123 172-340 78-211 (314)
45 2wqp_A Polysialic acid capsule 89.6 1.2 4.2E-05 42.9 9.0 144 238-393 38-205 (349)
46 3si9_A DHDPS, dihydrodipicolin 89.6 13 0.00044 35.1 16.2 124 171-340 76-211 (315)
47 1thf_D HISF protein; thermophI 89.5 7.4 0.00025 35.0 14.0 135 239-387 34-191 (253)
48 3nvt_A 3-deoxy-D-arabino-heptu 89.5 1.9 6.5E-05 42.2 10.4 150 235-395 156-312 (385)
49 3na8_A Putative dihydrodipicol 89.2 15 0.00051 34.7 17.0 156 172-391 79-246 (315)
50 3eeg_A 2-isopropylmalate synth 88.9 0.56 1.9E-05 44.9 6.1 141 234-393 27-192 (325)
51 2cw6_A Hydroxymethylglutaryl-C 88.9 2.2 7.4E-05 40.1 10.1 143 234-393 26-197 (298)
52 3flu_A DHDPS, dihydrodipicolin 88.8 15 0.00052 34.2 17.9 123 172-340 62-195 (297)
53 3iix_A Biotin synthetase, puta 88.4 7.7 0.00026 36.7 13.9 62 243-315 95-158 (348)
54 2r8w_A AGR_C_1641P; APC7498, d 88.1 18 0.00063 34.3 17.1 156 172-391 89-259 (332)
55 3tak_A DHDPS, dihydrodipicolin 88.1 17 0.00057 33.8 17.1 121 173-339 57-188 (291)
56 1r30_A Biotin synthase; SAM ra 87.8 17 0.00057 34.9 16.0 120 244-394 111-236 (369)
57 3nl6_A Thiamine biosynthetic b 87.7 4.3 0.00015 41.5 12.1 96 238-353 28-124 (540)
58 3ble_A Citramalate synthase fr 87.7 2.6 8.9E-05 40.4 10.0 71 235-314 169-243 (337)
59 3gka_A N-ethylmaleimide reduct 87.5 4.8 0.00017 38.9 11.8 106 232-338 158-296 (361)
60 4ab4_A Xenobiotic reductase B; 87.1 5.2 0.00018 38.7 11.8 106 232-338 150-288 (362)
61 3vnd_A TSA, tryptophan synthas 87.0 2.2 7.5E-05 39.5 8.6 110 274-395 4-149 (267)
62 3l23_A Sugar phosphate isomera 86.9 19 0.00065 33.3 19.4 156 234-395 107-301 (303)
63 2ftp_A Hydroxymethylglutaryl-C 86.8 2.1 7.3E-05 40.3 8.6 71 236-315 160-234 (302)
64 3g8r_A Probable spore coat pol 86.6 9.6 0.00033 36.6 13.1 147 236-394 22-193 (350)
65 2cw6_A Hydroxymethylglutaryl-C 86.5 3.3 0.00011 38.8 9.8 71 236-315 157-231 (298)
66 3ovp_A Ribulose-phosphate 3-ep 86.3 4.8 0.00016 36.2 10.4 127 239-394 78-221 (228)
67 1f6y_A 5-methyltetrahydrofolat 86.0 21 0.0007 32.8 15.0 148 234-393 24-187 (262)
68 3ble_A Citramalate synthase fr 86.0 1.3 4.4E-05 42.5 6.7 144 234-393 40-210 (337)
69 2vef_A Dihydropteroate synthas 85.9 10 0.00035 35.9 12.8 145 235-387 33-218 (314)
70 2p0o_A Hypothetical protein DU 85.8 10 0.00035 36.7 12.9 142 237-395 19-172 (372)
71 3ivs_A Homocitrate synthase, m 85.6 4.9 0.00017 39.7 10.8 140 235-393 61-221 (423)
72 2h9a_B CO dehydrogenase/acetyl 85.5 4.5 0.00016 38.3 10.1 138 235-389 74-230 (310)
73 3eb2_A Putative dihydrodipicol 85.5 14 0.00047 34.6 13.5 125 171-341 58-193 (300)
74 1nsj_A PRAI, phosphoribosyl an 85.4 6.7 0.00023 34.7 10.7 139 239-392 13-204 (205)
75 3ctl_A D-allulose-6-phosphate 85.4 5.2 0.00018 36.1 10.1 127 239-392 71-219 (231)
76 2dqw_A Dihydropteroate synthas 85.3 4.5 0.00015 38.0 9.9 143 235-386 52-213 (294)
77 3cpr_A Dihydrodipicolinate syn 85.2 24 0.00083 32.9 15.7 108 173-326 72-187 (304)
78 1nvm_A HOA, 4-hydroxy-2-oxoval 85.1 10 0.00035 36.2 12.7 145 234-394 29-191 (345)
79 2yxg_A DHDPS, dihydrodipicolin 85.0 24 0.00083 32.6 15.4 120 173-340 56-187 (289)
80 1o5k_A DHDPS, dihydrodipicolin 84.7 16 0.00054 34.3 13.6 94 237-340 96-204 (306)
81 1ydo_A HMG-COA lyase; TIM-barr 84.7 2.4 8.3E-05 40.1 7.9 71 236-315 158-232 (307)
82 1ka9_F Imidazole glycerol phos 84.7 14 0.00048 33.1 12.9 139 238-390 34-195 (252)
83 2nx9_A Oxaloacetate decarboxyl 84.5 5 0.00017 40.2 10.4 70 235-314 158-231 (464)
84 1h1y_A D-ribulose-5-phosphate 84.4 10 0.00035 33.7 11.7 127 239-392 78-223 (228)
85 3vnd_A TSA, tryptophan synthas 84.3 11 0.00037 34.8 12.0 147 237-394 34-205 (267)
86 3e96_A Dihydrodipicolinate syn 84.3 7.7 0.00026 36.6 11.3 73 236-315 34-112 (316)
87 3rmj_A 2-isopropylmalate synth 84.3 5.3 0.00018 38.8 10.3 83 235-326 157-254 (370)
88 1ydn_A Hydroxymethylglutaryl-C 84.3 3.2 0.00011 38.8 8.5 68 239-315 159-230 (295)
89 3inp_A D-ribulose-phosphate 3- 84.1 6.9 0.00024 35.7 10.4 125 239-392 100-245 (246)
90 1rqb_A Transcarboxylase 5S sub 83.9 4.4 0.00015 41.4 9.8 71 235-314 175-250 (539)
91 2bdq_A Copper homeostasis prot 83.8 4.3 0.00015 36.5 8.6 63 239-313 80-150 (224)
92 2ehh_A DHDPS, dihydrodipicolin 83.7 23 0.00079 32.9 14.2 123 173-341 56-190 (294)
93 1f6k_A N-acetylneuraminate lya 83.6 12 0.0004 34.9 12.1 73 236-315 25-105 (293)
94 2vc7_A Aryldialkylphosphatase; 83.4 13 0.00046 34.2 12.6 98 272-373 150-258 (314)
95 2vc6_A MOSA, dihydrodipicolina 83.3 9.4 0.00032 35.6 11.3 74 235-315 21-101 (292)
96 3flu_A DHDPS, dihydrodipicolin 83.3 10 0.00034 35.5 11.5 73 236-315 29-108 (297)
97 3nav_A Tryptophan synthase alp 83.2 8.1 0.00028 35.8 10.6 147 237-395 36-208 (271)
98 3ewb_X 2-isopropylmalate synth 83.1 6.6 0.00023 36.7 10.1 71 235-314 150-227 (293)
99 3tak_A DHDPS, dihydrodipicolin 83.1 10 0.00035 35.3 11.4 73 236-315 23-102 (291)
100 1twd_A Copper homeostasis prot 83.0 3.4 0.00012 37.9 7.7 90 239-341 77-182 (256)
101 1hjs_A Beta-1,4-galactanase; 4 82.9 32 0.0011 32.5 16.2 126 228-374 104-250 (332)
102 3qfe_A Putative dihydrodipicol 82.8 19 0.00065 33.9 13.4 73 236-315 33-112 (318)
103 3m5v_A DHDPS, dihydrodipicolin 82.8 7.7 0.00026 36.4 10.5 74 236-315 29-109 (301)
104 3nav_A Tryptophan synthase alp 82.8 3 0.0001 38.7 7.4 110 275-396 7-152 (271)
105 3e96_A Dihydrodipicolinate syn 82.8 32 0.0011 32.3 15.6 111 171-328 66-180 (316)
106 3fok_A Uncharacterized protein 82.7 22 0.00074 33.4 13.2 141 241-394 134-299 (307)
107 3gr7_A NADPH dehydrogenase; fl 82.6 33 0.0011 32.6 15.1 109 230-339 139-287 (340)
108 3tn4_A Phosphotriesterase; lac 82.5 5.4 0.00018 38.6 9.5 98 273-372 193-301 (360)
109 2rfg_A Dihydrodipicolinate syn 82.2 13 0.00043 34.8 11.7 122 173-340 56-188 (297)
110 1x7f_A Outer surface protein; 82.2 14 0.00047 36.0 12.1 142 237-395 43-198 (385)
111 2r8w_A AGR_C_1641P; APC7498, d 81.8 17 0.00058 34.5 12.6 73 236-315 56-135 (332)
112 2nuw_A 2-keto-3-deoxygluconate 81.8 12 0.00041 34.8 11.3 94 235-339 78-179 (288)
113 2ojp_A DHDPS, dihydrodipicolin 81.8 27 0.00094 32.3 13.9 121 173-339 57-188 (292)
114 3daq_A DHDPS, dihydrodipicolin 81.7 33 0.0011 31.8 15.2 122 173-340 58-191 (292)
115 3d0c_A Dihydrodipicolinate syn 81.7 35 0.0012 32.0 15.0 122 172-340 67-197 (314)
116 3na8_A Putative dihydrodipicol 81.5 16 0.00054 34.5 12.2 73 236-315 46-125 (315)
117 2wkj_A N-acetylneuraminate lya 81.4 12 0.00042 35.0 11.4 73 236-315 33-112 (303)
118 1nvm_A HOA, 4-hydroxy-2-oxoval 81.4 7.5 0.00026 37.2 10.0 71 235-314 149-224 (345)
119 2v9d_A YAGE; dihydrodipicolini 81.1 9.1 0.00031 36.7 10.5 138 236-391 53-209 (343)
120 2isw_A Putative fructose-1,6-b 81.0 12 0.00041 35.5 11.0 75 236-317 30-106 (323)
121 2yxg_A DHDPS, dihydrodipicolin 81.0 12 0.0004 34.9 11.0 73 236-315 22-101 (289)
122 3eeg_A 2-isopropylmalate synth 80.9 5.3 0.00018 38.0 8.6 71 235-314 151-228 (325)
123 3si9_A DHDPS, dihydrodipicolin 80.4 10 0.00035 35.8 10.4 73 236-315 44-123 (315)
124 2y5s_A DHPS, dihydropteroate s 80.4 38 0.0013 31.6 15.0 150 235-394 46-217 (294)
125 3qze_A DHDPS, dihydrodipicolin 80.2 13 0.00046 34.9 11.2 73 236-315 45-124 (314)
126 1zco_A 2-dehydro-3-deoxyphosph 80.1 8.1 0.00028 35.5 9.4 150 235-396 37-194 (262)
127 1qop_A Tryptophan synthase alp 80.0 5.5 0.00019 36.6 8.3 108 275-395 4-148 (268)
128 1xky_A Dihydrodipicolinate syn 79.9 11 0.00037 35.3 10.4 86 236-328 34-130 (301)
129 3l21_A DHDPS, dihydrodipicolin 79.9 10 0.00034 35.6 10.2 86 236-328 37-133 (304)
130 2ekc_A AQ_1548, tryptophan syn 79.9 35 0.0012 31.0 15.0 77 237-315 33-128 (262)
131 3s5o_A 4-hydroxy-2-oxoglutarat 79.6 40 0.0014 31.5 16.6 123 172-340 69-205 (307)
132 3dz1_A Dihydrodipicolinate syn 79.3 14 0.00048 34.8 11.0 72 236-315 30-108 (313)
133 3l5l_A Xenobiotic reductase A; 78.9 21 0.00071 34.3 12.3 108 230-338 153-304 (363)
134 3fkr_A L-2-keto-3-deoxyarabona 78.8 28 0.00094 32.7 12.9 73 236-315 30-109 (309)
135 1xky_A Dihydrodipicolinate syn 78.6 41 0.0014 31.3 14.0 95 237-341 96-201 (301)
136 3daq_A DHDPS, dihydrodipicolin 78.6 19 0.00067 33.4 11.7 73 236-315 24-103 (292)
137 3h5d_A DHDPS, dihydrodipicolin 78.5 35 0.0012 32.0 13.5 124 171-341 61-196 (311)
138 2wkj_A N-acetylneuraminate lya 78.3 44 0.0015 31.1 15.6 124 173-341 67-200 (303)
139 1tv8_A MOAA, molybdenum cofact 78.1 22 0.00075 33.4 12.2 59 245-315 63-125 (340)
140 2ehh_A DHDPS, dihydrodipicolin 78.1 13 0.00045 34.6 10.4 137 236-390 22-177 (294)
141 1vzw_A Phosphoribosyl isomeras 78.1 6.1 0.00021 35.4 7.8 132 239-388 36-187 (244)
142 2hmc_A AGR_L_411P, dihydrodipi 78.1 20 0.00067 34.3 11.7 70 236-315 48-124 (344)
143 1q7z_A 5-methyltetrahydrofolat 77.8 41 0.0014 34.4 14.7 147 234-395 339-500 (566)
144 1o5k_A DHDPS, dihydrodipicolin 77.6 13 0.00044 34.9 10.1 138 236-391 34-190 (306)
145 2v9d_A YAGE; dihydrodipicolini 77.5 28 0.00095 33.2 12.6 123 172-340 86-223 (343)
146 2rfg_A Dihydrodipicolinate syn 77.3 12 0.0004 35.0 9.8 74 235-315 21-101 (297)
147 1f6k_A N-acetylneuraminate lya 77.2 46 0.0016 30.8 15.5 122 173-340 60-191 (293)
148 2tps_A Protein (thiamin phosph 77.0 29 0.00099 30.3 12.0 82 238-330 34-116 (227)
149 1pii_A N-(5'phosphoribosyl)ant 77.0 7.6 0.00026 38.7 8.6 140 239-393 266-452 (452)
150 3qfe_A Putative dihydrodipicol 76.9 45 0.0015 31.3 13.8 123 172-340 66-204 (318)
151 3kws_A Putative sugar isomeras 76.9 42 0.0014 30.2 16.0 162 222-393 95-283 (287)
152 3iwp_A Copper homeostasis prot 76.8 9.3 0.00032 35.6 8.6 92 238-341 114-221 (287)
153 3pm6_A Putative fructose-bisph 76.7 24 0.00082 33.1 11.5 142 236-390 39-218 (306)
154 3cpr_A Dihydrodipicolinate syn 76.7 10 0.00034 35.7 9.1 72 236-314 38-116 (304)
155 3iv3_A Tagatose 1,6-diphosphat 76.7 19 0.00063 34.4 10.9 119 241-369 116-280 (332)
156 3ovg_A Amidohydrolase; structu 76.6 15 0.0005 35.5 10.4 95 275-373 171-276 (363)
157 2r14_A Morphinone reductase; H 76.5 29 0.001 33.5 12.7 102 233-338 164-308 (377)
158 3h5d_A DHDPS, dihydrodipicolin 75.8 10 0.00036 35.7 8.9 72 236-314 29-108 (311)
159 1vyr_A Pentaerythritol tetrani 75.6 31 0.0011 33.1 12.5 104 235-338 161-303 (364)
160 3obe_A Sugar phosphate isomera 75.5 50 0.0017 30.4 19.1 155 235-395 114-303 (305)
161 3a5f_A Dihydrodipicolinate syn 75.4 10 0.00034 35.3 8.7 86 236-328 23-119 (291)
162 1qop_A Tryptophan synthase alp 75.4 18 0.0006 33.2 10.3 79 237-315 33-128 (268)
163 3l5a_A NADH/flavin oxidoreduct 75.4 32 0.0011 33.8 12.7 85 232-316 167-285 (419)
164 3eb2_A Putative dihydrodipicol 75.2 18 0.00061 33.8 10.4 136 236-391 26-181 (300)
165 1yad_A Regulatory protein TENI 75.2 23 0.0008 31.0 10.8 123 241-395 81-217 (221)
166 1vs1_A 3-deoxy-7-phosphoheptul 75.1 38 0.0013 31.3 12.4 125 235-370 52-180 (276)
167 2ojp_A DHDPS, dihydrodipicolin 74.6 13 0.00045 34.5 9.3 73 236-315 23-102 (292)
168 1rvg_A Fructose-1,6-bisphospha 74.4 47 0.0016 31.2 12.8 73 236-317 29-103 (305)
169 1rqb_A Transcarboxylase 5S sub 74.2 21 0.00072 36.3 11.2 144 235-393 47-216 (539)
170 2nx9_A Oxaloacetate decarboxyl 73.7 24 0.00082 35.2 11.3 143 236-393 31-199 (464)
171 2y1h_A Putative deoxyribonucle 73.4 34 0.0012 30.8 11.7 95 269-374 122-219 (272)
172 3n9r_A Fructose-bisphosphate a 73.0 36 0.0012 32.0 11.7 138 236-386 29-199 (307)
173 3b4u_A Dihydrodipicolinate syn 72.5 18 0.00061 33.7 9.6 73 236-315 25-104 (294)
174 3ivs_A Homocitrate synthase, m 72.3 19 0.00064 35.5 10.0 67 238-314 183-253 (423)
175 3ajx_A 3-hexulose-6-phosphate 72.2 20 0.00067 31.0 9.4 122 240-388 69-204 (207)
176 3d0c_A Dihydrodipicolinate syn 72.0 62 0.0021 30.2 13.4 73 236-315 34-112 (314)
177 2r91_A 2-keto-3-deoxy-(6-phosp 72.0 32 0.0011 31.8 11.2 96 235-340 77-180 (286)
178 1z41_A YQJM, probable NADH-dep 71.2 43 0.0015 31.6 12.2 82 233-315 142-248 (338)
179 3apt_A Methylenetetrahydrofola 71.1 68 0.0023 30.0 13.6 137 240-394 34-199 (310)
180 3hgj_A Chromate reductase; TIM 71.1 44 0.0015 31.8 12.3 86 230-316 147-259 (349)
181 1rpx_A Protein (ribulose-phosp 70.9 21 0.00071 31.6 9.4 121 239-388 82-225 (230)
182 3u0h_A Xylose isomerase domain 70.7 57 0.002 29.0 14.9 158 234-393 83-275 (281)
183 4dpp_A DHDPS 2, dihydrodipicol 70.6 15 0.00052 35.4 8.8 85 237-328 82-177 (360)
184 3m5v_A DHDPS, dihydrodipicolin 70.1 40 0.0014 31.4 11.5 123 172-340 62-196 (301)
185 1icp_A OPR1, 12-oxophytodienoa 70.0 54 0.0019 31.5 12.8 102 233-338 165-310 (376)
186 3kru_A NADH:flavin oxidoreduct 69.8 62 0.0021 30.7 12.9 84 230-315 138-248 (343)
187 1lt8_A Betaine-homocysteine me 69.6 73 0.0025 31.1 13.6 153 218-392 48-233 (406)
188 3hbl_A Pyruvate carboxylase; T 69.6 17 0.00059 40.6 10.1 85 235-329 692-788 (1150)
189 1gvf_A Tagatose-bisphosphate a 69.4 31 0.0011 32.1 10.3 73 236-317 30-105 (286)
190 3a24_A Alpha-galactosidase; gl 69.3 13 0.00044 38.7 8.4 77 233-318 307-396 (641)
191 2qf7_A Pyruvate carboxylase pr 69.2 17 0.0006 40.6 10.1 85 235-329 709-805 (1165)
192 2gou_A Oxidoreductase, FMN-bin 69.1 43 0.0015 32.1 11.7 101 233-338 159-302 (365)
193 1wa3_A 2-keto-3-deoxy-6-phosph 69.0 17 0.00057 31.5 8.2 120 241-393 76-203 (205)
194 1dos_A Aldolase class II; lyas 68.9 74 0.0025 30.5 13.1 48 343-394 195-253 (358)
195 1w3i_A EDA, 2-keto-3-deoxy glu 68.6 32 0.0011 31.8 10.5 97 235-341 78-182 (293)
196 3s5o_A 4-hydroxy-2-oxoglutarat 68.4 8.7 0.0003 36.1 6.5 73 236-315 36-115 (307)
197 1bf6_A Phosphotriesterase homo 68.2 49 0.0017 29.7 11.6 98 273-374 138-245 (291)
198 1jcn_A Inosine monophosphate d 68.1 30 0.001 34.8 10.8 67 238-315 257-323 (514)
199 3l21_A DHDPS, dihydrodipicolin 68.1 30 0.001 32.3 10.1 110 172-327 70-187 (304)
200 3gtx_A Organophosphorus hydrol 67.7 32 0.0011 32.7 10.4 97 275-374 175-283 (339)
201 1h5y_A HISF; histidine biosynt 67.3 17 0.00058 32.2 8.0 85 237-330 35-125 (253)
202 3q94_A Fructose-bisphosphate a 67.2 62 0.0021 30.1 11.9 145 236-390 33-205 (288)
203 2czd_A Orotidine 5'-phosphate 66.6 25 0.00084 30.7 8.8 125 235-390 65-205 (208)
204 1tqj_A Ribulose-phosphate 3-ep 66.6 3.6 0.00012 37.1 3.2 69 239-315 21-91 (230)
205 2bmb_A Folic acid synthesis pr 66.2 1.2E+02 0.004 30.8 15.3 155 235-394 249-459 (545)
206 2gzx_A Putative TATD related D 65.6 51 0.0018 29.1 11.0 97 269-374 105-207 (265)
207 3noy_A 4-hydroxy-3-methylbut-2 65.5 89 0.0031 29.9 12.7 139 236-393 47-203 (366)
208 1w3i_A EDA, 2-keto-3-deoxy glu 64.8 27 0.00094 32.3 9.2 69 236-314 21-96 (293)
209 3txv_A Probable tagatose 6-pho 64.7 81 0.0028 31.2 12.7 123 241-389 38-206 (450)
210 3a5f_A Dihydrodipicolinate syn 64.6 17 0.00057 33.8 7.6 122 173-340 57-189 (291)
211 2d73_A Alpha-glucosidase SUSB; 64.3 10 0.00035 40.0 6.5 125 233-377 369-514 (738)
212 4fo4_A Inosine 5'-monophosphat 64.1 19 0.00066 34.7 8.1 67 238-315 110-176 (366)
213 2r91_A 2-keto-3-deoxy-(6-phosp 63.9 28 0.00095 32.2 9.0 71 235-315 19-96 (286)
214 3rcm_A TATD family hydrolase; 63.8 29 0.00098 32.1 9.0 94 270-374 111-212 (287)
215 3zwt_A Dihydroorotate dehydrog 63.5 24 0.00083 34.0 8.7 91 220-316 195-327 (367)
216 3iwp_A Copper homeostasis prot 63.2 95 0.0033 28.7 15.9 85 230-328 42-148 (287)
217 2nuw_A 2-keto-3-deoxygluconate 63.2 29 0.00098 32.1 8.9 71 235-315 20-97 (288)
218 3bw2_A 2-nitropropane dioxygen 62.8 59 0.002 31.0 11.4 60 238-315 112-171 (369)
219 3gnh_A L-lysine, L-arginine ca 62.6 21 0.00071 33.9 8.2 65 239-314 171-245 (403)
220 1tqx_A D-ribulose-5-phosphate 62.6 54 0.0019 29.2 10.3 103 275-392 100-223 (227)
221 3r2g_A Inosine 5'-monophosphat 62.5 24 0.00083 33.9 8.4 68 237-315 101-168 (361)
222 3k2g_A Resiniferatoxin-binding 62.1 38 0.0013 32.5 9.8 97 275-373 192-306 (364)
223 3fkr_A L-2-keto-3-deoxyarabona 61.9 55 0.0019 30.6 10.7 79 173-296 64-145 (309)
224 3mcm_A 2-amino-4-hydroxy-6-hyd 61.4 60 0.0021 32.1 11.2 147 236-386 213-382 (442)
225 3dx5_A Uncharacterized protein 61.3 90 0.0031 27.8 13.2 158 235-402 84-282 (286)
226 3q94_A Fructose-bisphosphate a 61.1 5.3 0.00018 37.4 3.3 122 218-363 156-284 (288)
227 2w6r_A Imidazole glycerol phos 60.4 75 0.0026 28.4 11.2 78 238-327 33-119 (266)
228 3fa4_A 2,3-dimethylmalate lyas 60.1 22 0.00074 33.4 7.4 67 235-317 170-240 (302)
229 3cu2_A Ribulose-5-phosphate 3- 60.1 81 0.0028 28.2 11.1 122 239-388 83-234 (237)
230 3l0g_A Nicotinate-nucleotide p 60.0 24 0.00082 33.1 7.6 60 239-316 218-279 (300)
231 1xwy_A DNAse TATD, deoxyribonu 60.0 38 0.0013 30.2 9.1 94 271-374 110-210 (264)
232 1qo2_A Molecule: N-((5-phospho 59.7 34 0.0012 30.4 8.6 133 238-390 33-187 (241)
233 3ngf_A AP endonuclease, family 59.5 69 0.0024 28.5 10.8 98 235-334 93-209 (269)
234 3aty_A Tcoye, prostaglandin F2 58.7 61 0.0021 31.3 10.6 101 234-338 173-316 (379)
235 3tqv_A Nicotinate-nucleotide p 58.5 32 0.0011 32.0 8.1 59 240-316 210-270 (287)
236 2v82_A 2-dehydro-3-deoxy-6-pho 58.5 40 0.0014 29.2 8.7 121 240-393 72-203 (212)
237 1ujp_A Tryptophan synthase alp 58.2 19 0.00063 33.2 6.5 64 321-396 83-146 (271)
238 2hsa_B 12-oxophytodienoate red 57.9 47 0.0016 32.4 9.7 84 232-315 168-285 (402)
239 1q7z_A 5-methyltetrahydrofolat 57.8 1.7E+02 0.0057 29.8 17.6 146 231-395 122-292 (566)
240 1vr6_A Phospho-2-dehydro-3-deo 57.6 80 0.0027 30.1 11.1 124 235-369 120-247 (350)
241 1xi3_A Thiamine phosphate pyro 57.6 90 0.0031 26.6 13.0 77 238-328 29-106 (215)
242 3usb_A Inosine-5'-monophosphat 57.4 42 0.0014 33.8 9.6 67 238-315 258-324 (511)
243 3pnz_A Phosphotriesterase fami 57.4 56 0.0019 30.8 10.0 98 273-374 168-275 (330)
244 3tjl_A NADPH dehydrogenase; OL 57.3 56 0.0019 31.9 10.1 104 237-340 170-324 (407)
245 2ffi_A 2-pyrone-4,6-dicarboxyl 57.2 37 0.0013 30.6 8.5 123 243-375 100-240 (288)
246 2tps_A Protein (thiamin phosph 57.1 81 0.0028 27.3 10.6 90 291-393 118-223 (227)
247 2fli_A Ribulose-phosphate 3-ep 56.6 75 0.0026 27.4 10.2 120 240-389 76-217 (220)
248 2v82_A 2-dehydro-3-deoxy-6-pho 56.6 89 0.003 26.9 10.6 79 238-331 22-103 (212)
249 1fa2_A Beta-amylase; TIM barre 56.0 1.7 5.8E-05 43.4 -1.1 104 239-358 38-162 (498)
250 1wdp_A Beta-amylase; (beta/alp 56.0 1.8 6.1E-05 43.2 -0.9 105 239-359 37-162 (495)
251 2hmc_A AGR_L_411P, dihydrodipi 55.8 78 0.0027 30.1 10.7 83 235-327 105-199 (344)
252 2xfr_A Beta-amylase; hydrolase 55.2 1.9 6.4E-05 43.4 -0.9 105 238-358 34-159 (535)
253 2y88_A Phosphoribosyl isomeras 55.1 14 0.00049 32.8 5.2 134 239-388 35-190 (244)
254 3t7v_A Methylornithine synthas 55.1 1.3E+02 0.0045 28.1 12.3 65 243-315 102-168 (350)
255 1q6o_A Humps, 3-keto-L-gulonat 54.8 40 0.0014 29.5 8.0 122 243-392 75-213 (216)
256 4i6k_A Amidohydrolase family p 54.4 31 0.0011 31.6 7.5 124 242-375 112-252 (294)
257 1zzm_A Putative deoxyribonucle 54.2 67 0.0023 28.4 9.6 93 271-374 112-210 (259)
258 3eoo_A Methylisocitrate lyase; 53.9 42 0.0014 31.4 8.2 67 234-317 170-240 (298)
259 1k77_A EC1530, hypothetical pr 53.3 1E+02 0.0036 26.9 10.8 98 235-334 85-202 (260)
260 2ob3_A Parathion hydrolase; me 53.0 47 0.0016 31.1 8.7 100 273-374 148-270 (330)
261 1j6o_A TATD-related deoxyribon 52.4 1.1E+02 0.0036 27.4 10.8 97 269-374 116-217 (268)
262 3vni_A Xylose isomerase domain 52.2 1.1E+02 0.0036 27.5 10.8 140 222-369 79-245 (294)
263 2ztj_A Homocitrate synthase; ( 52.1 60 0.0021 31.3 9.4 71 235-314 145-219 (382)
264 2yyu_A Orotidine 5'-phosphate 51.9 96 0.0033 27.7 10.2 79 307-391 154-236 (246)
265 3lye_A Oxaloacetate acetyl hyd 51.9 48 0.0016 31.1 8.3 67 235-317 178-248 (307)
266 3b0p_A TRNA-dihydrouridine syn 51.9 41 0.0014 32.0 8.1 129 171-316 71-225 (350)
267 3khj_A Inosine-5-monophosphate 51.5 74 0.0025 30.4 9.8 66 238-315 107-172 (361)
268 1rd5_A Tryptophan synthase alp 51.2 38 0.0013 30.5 7.5 40 276-316 6-52 (262)
269 3kdn_A Rubisco, ribulose bisph 50.6 1.9E+02 0.0066 28.4 13.8 38 356-394 377-416 (444)
270 3a5v_A Alpha-galactosidase; be 50.5 22 0.00075 34.6 6.0 68 244-318 40-131 (397)
271 3chv_A Prokaryotic domain of u 50.5 1E+02 0.0034 28.5 10.2 140 237-391 36-198 (284)
272 3tha_A Tryptophan synthase alp 49.6 67 0.0023 29.2 8.7 150 235-395 28-199 (252)
273 3tdn_A FLR symmetric alpha-bet 49.4 36 0.0012 30.4 6.9 82 238-331 38-128 (247)
274 3civ_A Endo-beta-1,4-mannanase 49.1 1.8E+02 0.006 27.5 14.8 129 225-363 142-294 (343)
275 4avf_A Inosine-5'-monophosphat 49.0 44 0.0015 33.5 8.1 67 238-315 231-297 (490)
276 3k13_A 5-methyltetrahydrofolat 49.0 1.7E+02 0.0057 27.2 17.5 132 235-375 37-185 (300)
277 3no5_A Uncharacterized protein 49.0 1.5E+02 0.005 27.2 11.0 144 237-394 32-197 (275)
278 1eix_A Orotidine 5'-monophosph 48.1 65 0.0022 28.8 8.4 90 239-341 83-194 (245)
279 3jr2_A Hexulose-6-phosphate sy 48.1 1.1E+02 0.0038 26.5 9.8 88 240-341 75-178 (218)
280 3irs_A Uncharacterized protein 47.6 39 0.0013 30.9 7.0 96 296-396 46-153 (291)
281 3nur_A Amidohydrolase; TIM bar 47.4 35 0.0012 32.6 6.8 70 321-395 118-187 (357)
282 4fxs_A Inosine-5'-monophosphat 47.4 42 0.0014 33.7 7.6 66 239-315 234-299 (496)
283 2ze3_A DFA0005; organic waste 46.9 76 0.0026 29.2 8.7 65 235-317 168-233 (275)
284 3c8f_A Pyruvate formate-lyase 46.8 1.4E+02 0.0047 25.6 13.6 114 248-394 69-191 (245)
285 3ih1_A Methylisocitrate lyase; 46.7 80 0.0027 29.5 8.9 66 235-317 175-244 (305)
286 2vun_A Enamidase; nicotinate d 46.3 1.8E+02 0.0063 26.9 15.0 117 241-372 151-277 (386)
287 3ixl_A Amdase, arylmalonate de 46.3 45 0.0015 29.9 7.0 127 233-373 51-189 (240)
288 1uas_A Alpha-galactosidase; TI 46.2 29 0.00098 33.2 6.0 67 245-318 41-132 (362)
289 1gvf_A Tagatose-bisphosphate a 46.2 28 0.00095 32.4 5.6 115 219-363 153-280 (286)
290 2qgq_A Protein TM_1862; alpha- 45.9 1.8E+02 0.0061 26.6 14.4 72 240-316 41-120 (304)
291 2c6q_A GMP reductase 2; TIM ba 45.8 1E+02 0.0036 29.2 9.9 66 239-315 121-188 (351)
292 4af0_A Inosine-5'-monophosphat 45.7 1.2E+02 0.0041 30.8 10.5 90 237-340 282-395 (556)
293 3ayv_A Putative uncharacterize 45.3 90 0.0031 27.3 8.9 73 235-309 76-154 (254)
294 1vrd_A Inosine-5'-monophosphat 45.2 69 0.0023 31.9 8.9 67 238-315 239-305 (494)
295 1v5x_A PRA isomerase, phosphor 45.0 17 0.00057 32.0 3.7 116 246-394 73-200 (203)
296 3bdk_A D-mannonate dehydratase 44.9 2.2E+02 0.0075 27.4 12.4 71 262-334 189-284 (386)
297 1h5y_A HISF; histidine biosynt 44.3 1.4E+02 0.0047 26.0 10.0 138 172-328 65-244 (253)
298 4aaj_A N-(5'-phosphoribosyl)an 44.1 30 0.001 30.9 5.4 80 303-393 140-226 (228)
299 1i60_A IOLI protein; beta barr 44.0 1.6E+02 0.0054 25.8 10.5 158 234-393 83-271 (278)
300 3qc0_A Sugar isomerase; TIM ba 43.9 1.7E+02 0.0056 25.7 13.9 157 235-393 83-274 (275)
301 1f76_A Dihydroorotate dehydrog 43.8 96 0.0033 29.0 9.2 73 238-316 228-318 (336)
302 1m5w_A Pyridoxal phosphate bio 43.4 37 0.0013 30.7 5.7 112 243-386 82-203 (243)
303 1u83_A Phosphosulfolactate syn 42.9 1.9E+02 0.0065 26.5 10.5 100 249-362 66-186 (276)
304 3bg3_A Pyruvate carboxylase, m 42.9 3.2E+02 0.011 28.7 14.1 141 235-393 125-302 (718)
305 3ffs_A Inosine-5-monophosphate 42.4 66 0.0023 31.3 7.9 66 238-315 146-211 (400)
306 1ps9_A 2,4-dienoyl-COA reducta 42.4 91 0.0031 32.2 9.6 87 224-315 134-247 (671)
307 3q58_A N-acetylmannosamine-6-p 42.3 1.8E+02 0.0061 25.6 11.5 123 240-390 93-227 (229)
308 1qpo_A Quinolinate acid phosph 42.2 78 0.0027 29.2 8.1 62 240-316 206-269 (284)
309 1dbt_A Orotidine 5'-phosphate 42.2 89 0.0031 27.7 8.3 75 306-391 152-235 (239)
310 2dvt_A Thermophilic reversible 42.1 54 0.0018 30.1 7.1 71 321-395 84-159 (327)
311 1yix_A Deoxyribonuclease YCFH; 42.0 1.8E+02 0.006 25.5 12.7 96 270-374 108-208 (265)
312 3dz1_A Dihydrodipicolinate syn 41.9 87 0.003 29.2 8.5 53 236-296 90-142 (313)
313 2p10_A MLL9387 protein; putati 41.5 60 0.0021 30.0 7.0 68 242-313 42-125 (286)
314 2xio_A Putative deoxyribonucle 41.4 1.9E+02 0.0064 26.4 10.7 92 270-374 124-222 (301)
315 2isw_A Putative fructose-1,6-b 41.4 17 0.00057 34.5 3.3 122 218-363 150-303 (323)
316 1eep_A Inosine 5'-monophosphat 41.2 73 0.0025 30.8 8.1 64 241-315 158-221 (404)
317 1f75_A Undecaprenyl pyrophosph 41.0 2E+02 0.0067 26.0 10.3 64 235-302 51-119 (249)
318 3gnn_A Nicotinate-nucleotide p 40.9 78 0.0027 29.5 7.8 58 241-316 222-281 (298)
319 3tva_A Xylose isomerase domain 40.9 1.9E+02 0.0066 25.6 11.3 98 234-334 101-209 (290)
320 3b8i_A PA4872 oxaloacetate dec 40.3 85 0.0029 29.0 8.0 66 235-317 168-235 (287)
321 2xn2_A Alpha-galactosidase; hy 40.1 51 0.0017 34.8 7.2 50 240-296 355-417 (732)
322 1xg4_A Probable methylisocitra 39.6 1.1E+02 0.0036 28.5 8.5 66 235-317 167-236 (295)
323 3paj_A Nicotinate-nucleotide p 39.4 54 0.0018 30.9 6.5 59 240-316 243-303 (320)
324 3rhg_A Putative phophotriester 39.1 1.7E+02 0.0059 27.8 10.3 99 275-374 181-297 (365)
325 4inf_A Metal-dependent hydrola 38.9 53 0.0018 31.5 6.6 69 322-395 137-205 (373)
326 2pcq_A Putative dihydrodipicol 38.7 2E+02 0.0067 26.2 10.3 94 235-340 75-179 (283)
327 4a3u_A NCR, NADH\:flavin oxido 37.7 2.7E+02 0.0091 26.3 12.5 85 231-315 148-260 (358)
328 3gg7_A Uncharacterized metallo 37.6 59 0.002 29.4 6.4 111 270-393 101-222 (254)
329 2r8c_A Putative amidohydrolase 37.6 64 0.0022 30.8 7.1 76 239-325 179-264 (426)
330 2gjl_A Hypothetical protein PA 37.6 1.5E+02 0.0051 27.5 9.5 58 239-315 87-144 (328)
331 1vhc_A Putative KHG/KDPG aldol 37.4 2.1E+02 0.0073 25.1 10.1 83 239-341 80-169 (224)
332 1rvg_A Fructose-1,6-bisphospha 36.8 13 0.00044 35.0 1.7 61 218-297 150-211 (305)
333 1tqj_A Ribulose-phosphate 3-ep 36.4 1.7E+02 0.0057 25.7 9.2 121 239-388 76-219 (230)
334 4e38_A Keto-hydroxyglutarate-a 36.3 50 0.0017 29.6 5.5 82 239-340 97-185 (232)
335 3ngf_A AP endonuclease, family 36.2 1.1E+02 0.0039 27.0 8.2 92 302-395 29-145 (269)
336 2d2r_A Undecaprenyl pyrophosph 36.1 2.4E+02 0.0082 25.3 10.8 68 235-306 46-119 (245)
337 1s2w_A Phosphoenolpyruvate pho 35.9 1.1E+02 0.0036 28.5 7.9 68 235-316 170-238 (295)
338 3tml_A 2-dehydro-3-deoxyphosph 35.9 2.6E+02 0.009 25.7 11.7 137 245-395 45-197 (288)
339 3n9r_A Fructose-bisphosphate a 35.7 27 0.00092 32.8 3.7 115 218-362 152-302 (307)
340 1o4u_A Type II quinolic acid p 35.7 66 0.0023 29.8 6.4 63 239-316 204-268 (285)
341 3tqv_A Nicotinate-nucleotide p 34.9 81 0.0028 29.2 6.8 11 189-199 92-102 (287)
342 3b0p_A TRNA-dihydrouridine syn 34.6 2.4E+02 0.008 26.6 10.4 72 236-316 71-164 (350)
343 2hbv_A 2-amino-3-carboxymucona 34.2 1E+02 0.0035 28.5 7.7 68 322-395 105-172 (334)
344 2y7e_A 3-keto-5-aminohexanoate 33.7 1.9E+02 0.0066 26.5 9.2 140 237-391 36-200 (282)
345 1olt_A Oxygen-independent copr 33.7 3.3E+02 0.011 26.5 11.7 123 248-394 104-233 (457)
346 3qas_B Undecaprenyl pyrophosph 33.6 2E+02 0.0067 26.1 9.1 64 235-302 48-116 (253)
347 2hk0_A D-psicose 3-epimerase; 33.4 2.7E+02 0.0091 25.0 11.9 98 235-334 107-227 (309)
348 3iyg_B T-complex protein 1 sub 33.4 1.7E+02 0.006 29.2 9.7 48 263-313 247-299 (513)
349 3dxi_A Putative aldolase; TIM 33.3 1.1E+02 0.0037 28.8 7.6 59 246-314 154-216 (320)
350 2p10_A MLL9387 protein; putati 32.9 1.6E+02 0.0055 27.2 8.4 79 238-316 173-259 (286)
351 1lt8_A Betaine-homocysteine me 32.8 3.5E+02 0.012 26.2 19.8 143 231-394 135-318 (406)
352 4do7_A Amidohydrolase 2; enzym 32.6 1.4E+02 0.0049 27.1 8.4 103 270-375 119-248 (303)
353 3usb_A Inosine-5'-monophosphat 32.6 3.2E+02 0.011 27.2 11.5 143 239-398 197-363 (511)
354 3kws_A Putative sugar isomeras 32.5 2.6E+02 0.009 24.7 10.8 96 301-396 43-161 (287)
355 2z6i_A Trans-2-enoyl-ACP reduc 32.5 90 0.0031 29.2 7.0 82 239-339 79-172 (332)
356 2yx0_A Radical SAM enzyme; pre 32.3 33 0.0011 32.2 3.9 39 275-315 159-200 (342)
357 1zlp_A PSR132, petal death pro 32.0 1.7E+02 0.0057 27.5 8.6 66 235-317 189-258 (318)
358 3hbl_A Pyruvate carboxylase; T 31.8 5.7E+02 0.019 28.4 14.2 142 234-393 554-733 (1150)
359 2b7n_A Probable nicotinate-nuc 31.3 1.5E+02 0.0051 27.0 8.1 57 245-316 199-257 (273)
360 3b4u_A Dihydrodipicolinate syn 31.2 1.4E+02 0.0048 27.4 8.0 95 237-339 87-195 (294)
361 1yad_A Regulatory protein TENI 31.1 2.5E+02 0.0086 24.0 13.1 73 241-329 35-109 (221)
362 1luc_B Bacterial luciferase; m 30.9 23 0.00078 33.2 2.4 44 343-390 272-315 (324)
363 3hg3_A Alpha-galactosidase A; 30.9 1.3E+02 0.0046 29.2 8.0 85 244-335 50-170 (404)
364 1nfp_A LUXF gene product; flav 30.8 31 0.0011 30.3 3.2 28 343-370 170-198 (228)
365 3lab_A Putative KDPG (2-keto-3 30.8 45 0.0015 29.6 4.2 81 240-340 77-170 (217)
366 3ctl_A D-allulose-6-phosphate 30.5 2.8E+02 0.0096 24.4 9.6 68 239-315 17-86 (231)
367 3sgv_B Undecaprenyl pyrophosph 30.3 2.4E+02 0.0083 25.5 9.1 64 235-302 48-116 (253)
368 1mxs_A KDPG aldolase; 2-keto-3 30.2 1.8E+02 0.006 25.7 8.1 81 238-336 41-125 (225)
369 1gox_A (S)-2-hydroxy-acid oxid 30.2 3.1E+02 0.011 26.0 10.5 62 277-339 215-290 (370)
370 3q58_A N-acetylmannosamine-6-p 29.9 2.9E+02 0.0097 24.3 12.3 61 236-316 37-108 (229)
371 1wzu_A Quinolinate synthetase 29.8 2.7E+02 0.0093 25.8 9.5 92 248-351 70-182 (300)
372 2qiw_A PEP phosphonomutase; st 29.6 2.1E+02 0.007 25.9 8.6 66 235-318 168-238 (255)
373 3igs_A N-acetylmannosamine-6-p 29.6 2.9E+02 0.0099 24.3 13.0 60 237-316 38-108 (232)
374 2gwg_A 4-oxalomesaconate hydra 29.4 1.4E+02 0.0048 27.7 7.8 74 321-395 96-173 (350)
375 3lrk_A Alpha-galactosidase 1; 29.3 1E+02 0.0034 30.8 6.8 66 246-318 63-151 (479)
376 1ka9_F Imidazole glycerol phos 29.2 2.9E+02 0.0098 24.1 9.9 98 218-328 106-242 (252)
377 3paj_A Nicotinate-nucleotide p 29.1 95 0.0033 29.2 6.3 43 338-389 252-295 (320)
378 2vg3_A Undecaprenyl pyrophosph 29.1 3.4E+02 0.012 24.9 11.6 64 235-302 86-154 (284)
379 2hjp_A Phosphonopyruvate hydro 29.0 1.5E+02 0.0052 27.3 7.7 68 235-317 166-236 (290)
380 2q02_A Putative cytoplasmic pr 28.8 1.4E+02 0.0047 26.2 7.4 93 301-396 24-135 (272)
381 1ep3_A Dihydroorotate dehydrog 28.5 2E+02 0.0067 26.2 8.6 88 221-316 147-270 (311)
382 1gte_A Dihydropyrimidine dehyd 28.1 2.2E+02 0.0075 31.1 10.0 91 219-316 684-816 (1025)
383 3can_A Pyruvate-formate lyase- 27.8 2.5E+02 0.0086 23.0 10.2 97 276-395 22-125 (182)
384 3gk0_A PNP synthase, pyridoxin 27.7 1.1E+02 0.0039 28.0 6.3 113 242-386 109-231 (278)
385 2wm1_A 2-amino-3-carboxymucona 27.7 66 0.0023 29.8 5.1 70 321-395 100-169 (336)
386 1vcv_A Probable deoxyribose-ph 27.3 2.9E+02 0.0098 24.4 8.9 86 302-394 73-182 (226)
387 1szn_A Alpha-galactosidase; (b 27.2 99 0.0034 30.1 6.4 69 243-318 42-134 (417)
388 3fst_A 5,10-methylenetetrahydr 27.1 3.8E+02 0.013 24.8 15.5 138 240-395 44-203 (304)
389 2jbm_A Nicotinate-nucleotide p 27.1 1.7E+02 0.0057 27.1 7.7 62 241-317 210-273 (299)
390 1wbh_A KHG/KDPG aldolase; lyas 27.1 2.5E+02 0.0086 24.4 8.6 80 239-336 32-115 (214)
391 2hbv_A 2-amino-3-carboxymucona 27.0 1.4E+02 0.0046 27.6 7.2 48 240-297 132-180 (334)
392 3gm8_A Glycoside hydrolase fam 26.9 2.4E+02 0.0083 30.0 9.8 47 347-394 368-416 (801)
393 2qr6_A IMP dehydrogenase/GMP r 26.9 2.5E+02 0.0086 26.7 9.3 87 222-317 140-240 (393)
394 3nqb_A Adenine deaminase 2; PS 26.8 1.6E+02 0.0055 30.1 8.2 86 274-372 203-293 (608)
395 2q02_A Putative cytoplasmic pr 26.5 1.2E+02 0.004 26.7 6.4 57 236-297 86-142 (272)
396 1yxy_A Putative N-acetylmannos 26.3 3.1E+02 0.011 23.6 9.6 59 238-316 39-108 (234)
397 2xz9_A Phosphoenolpyruvate-pro 26.2 56 0.0019 30.8 4.2 85 270-360 231-322 (324)
398 3ls9_A Triazine hydrolase; atr 26.2 1.5E+02 0.0053 28.2 7.7 57 339-395 173-233 (456)
399 2jwk_A Protein TOLR; periplasm 26.2 1.6E+02 0.0056 20.3 6.5 46 346-395 28-73 (74)
400 1luc_A Bacterial luciferase; m 26.0 31 0.001 32.7 2.4 29 343-371 300-328 (355)
401 3cny_A Inositol catabolism pro 26.0 3.4E+02 0.012 23.9 9.8 100 233-334 88-214 (301)
402 3guw_A Uncharacterized protein 26.0 1.8E+02 0.0061 26.2 7.5 106 272-392 109-227 (261)
403 2qul_A D-tagatose 3-epimerase; 26.0 3.4E+02 0.011 23.8 15.7 132 235-370 88-247 (290)
404 3igs_A N-acetylmannosamine-6-p 25.8 1.4E+02 0.0047 26.5 6.6 124 241-392 94-229 (232)
405 3l0g_A Nicotinate-nucleotide p 25.7 1.4E+02 0.0047 27.8 6.7 10 189-198 101-110 (300)
406 3inp_A D-ribulose-phosphate 3- 25.6 3.6E+02 0.012 24.0 14.9 65 239-315 44-115 (246)
407 1tvl_A Protein YTNJ; beta-alph 25.5 48 0.0016 32.8 3.8 40 342-388 364-403 (454)
408 1ass_A Thermosome; chaperonin, 25.3 1.4E+02 0.0046 24.9 6.1 57 272-331 58-116 (159)
409 1fvp_A Flavoprotein 390, FP390 25.2 35 0.0012 29.8 2.5 28 343-370 173-201 (231)
410 3cqj_A L-ribulose-5-phosphate 25.1 3.6E+02 0.012 23.9 15.0 153 235-393 108-285 (295)
411 1h1y_A D-ribulose-5-phosphate 25.0 1.3E+02 0.0044 26.3 6.2 69 239-315 23-93 (228)
412 3ipw_A Hydrolase TATD family p 25.0 2.5E+02 0.0085 26.3 8.6 90 272-374 153-250 (325)
413 4i6k_A Amidohydrolase family p 25.0 2.3E+02 0.0079 25.5 8.3 87 302-396 59-152 (294)
414 3pfg_A N-methyltransferase; N, 25.0 2.5E+02 0.0086 24.4 8.4 96 274-369 36-150 (263)
415 1geq_A Tryptophan synthase alp 25.0 3.4E+02 0.012 23.6 12.5 78 235-316 19-115 (248)
416 3ks6_A Glycerophosphoryl diest 24.9 47 0.0016 29.8 3.3 39 277-317 195-233 (250)
417 2i7g_A Monooxygenase, AGR_C_41 24.8 46 0.0016 31.8 3.4 47 342-388 306-353 (376)
418 1tv5_A Dhodehase, dihydroorota 24.5 1.5E+02 0.0051 29.2 7.1 75 236-316 312-402 (443)
419 3feq_A Putative amidohydrolase 24.4 61 0.0021 30.7 4.3 64 239-313 176-249 (423)
420 1gml_A T-complex protein 1 sub 24.2 1.5E+02 0.0052 25.0 6.3 66 263-331 52-122 (178)
421 1jub_A Dihydroorotate dehydrog 24.0 4.1E+02 0.014 24.1 12.3 70 238-316 109-192 (311)
422 3be7_A Zn-dependent arginine c 24.0 1.2E+02 0.0042 28.5 6.4 61 243-314 174-244 (408)
423 3mz2_A Glycerophosphoryl diest 23.8 84 0.0029 29.0 4.9 41 275-317 217-267 (292)
424 1qwg_A PSL synthase;, (2R)-pho 23.3 4.1E+02 0.014 23.9 9.3 118 223-362 25-162 (251)
425 3qja_A IGPS, indole-3-glycerol 23.2 2.5E+02 0.0084 25.5 7.9 64 239-315 76-141 (272)
426 4f0r_A 5-methylthioadenosine/S 23.0 1.7E+02 0.0058 27.8 7.3 51 345-395 163-214 (447)
427 2d69_A Ribulose bisphosphate c 23.0 5.4E+02 0.018 25.1 14.6 165 169-392 203-395 (430)
428 2yw3_A 4-hydroxy-2-oxoglutarat 22.9 3.5E+02 0.012 23.2 8.7 82 239-340 74-162 (207)
429 3i65_A Dihydroorotate dehydrog 22.4 1.1E+02 0.0036 30.0 5.5 74 237-316 285-374 (415)
430 3qja_A IGPS, indole-3-glycerol 22.4 3.9E+02 0.013 24.1 9.2 121 243-389 130-261 (272)
431 1wa3_A 2-keto-3-deoxy-6-phosph 22.4 2.6E+02 0.0089 23.5 7.7 77 238-329 25-104 (205)
432 3lm3_A Uncharacterized protein 22.3 75 0.0026 29.8 4.1 65 321-388 95-162 (449)
433 3hn3_A Beta-G1, beta-glucuroni 22.2 1.8E+02 0.0063 29.6 7.6 47 348-394 404-454 (613)
434 3ivz_A Nitrilase; alpha-beta s 22.1 2.4E+02 0.0081 24.9 7.6 47 239-285 25-79 (262)
435 1tz9_A Mannonate dehydratase; 21.9 4.8E+02 0.016 24.2 11.3 69 263-333 188-279 (367)
436 1z41_A YQJM, probable NADH-dep 21.8 4.8E+02 0.016 24.1 10.6 58 234-293 38-101 (338)
437 3gnn_A Nicotinate-nucleotide p 21.8 1.6E+02 0.0054 27.4 6.3 55 320-389 218-273 (298)
438 1x1o_A Nicotinate-nucleotide p 21.8 2.4E+02 0.0082 25.9 7.6 58 241-316 209-268 (286)
439 2qf7_A Pyruvate carboxylase pr 21.7 6.3E+02 0.022 28.0 12.2 132 237-389 647-806 (1165)
440 3sz8_A 2-dehydro-3-deoxyphosph 21.7 4.7E+02 0.016 24.0 12.0 112 269-393 77-193 (285)
441 2agk_A 1-(5-phosphoribosyl)-5- 21.7 1.8E+02 0.0061 26.2 6.6 80 238-335 41-133 (260)
442 3i4e_A Isocitrate lyase; struc 21.6 3.3E+02 0.011 26.7 8.8 67 236-315 272-351 (439)
443 1vhc_A Putative KHG/KDPG aldol 21.2 4.1E+02 0.014 23.2 10.1 80 239-336 33-116 (224)
444 3ceu_A Thiamine phosphate pyro 21.1 1.3E+02 0.0043 26.0 5.3 84 239-339 17-117 (210)
445 2qw5_A Xylose isomerase-like T 21.0 4.7E+02 0.016 23.7 11.9 134 234-372 108-284 (335)
446 4af0_A Inosine-5'-monophosphat 20.8 5.5E+02 0.019 26.0 10.4 53 301-363 285-345 (556)
447 3ajx_A 3-hexulose-6-phosphate 20.8 2E+02 0.0068 24.3 6.6 65 238-315 16-83 (207)
448 3qfw_A Ribulose-1,5-bisphospha 20.8 4.2E+02 0.014 25.4 9.2 40 355-395 328-369 (378)
449 3fs2_A 2-dehydro-3-deoxyphosph 20.8 5E+02 0.017 24.0 12.0 122 260-395 85-215 (298)
450 2qiw_A PEP phosphonomutase; st 20.6 3.8E+02 0.013 24.0 8.6 84 239-328 97-200 (255)
451 1gp6_A Leucoanthocyanidin diox 20.5 1.1E+02 0.0038 29.0 5.1 45 345-393 58-102 (356)
452 2aam_A Hypothetical protein TM 20.4 3.1E+02 0.011 25.5 8.1 74 238-315 125-210 (309)
453 1mzh_A Deoxyribose-phosphate a 20.3 4.2E+02 0.015 22.9 9.5 90 242-339 77-185 (225)
454 3eol_A Isocitrate lyase; seatt 20.3 2.5E+02 0.0085 27.6 7.6 69 235-316 266-347 (433)
455 2p9b_A Possible prolidase; pro 20.2 3.3E+02 0.011 26.0 8.7 69 242-314 192-265 (458)
456 2h9a_A Carbon monoxide dehydro 20.1 3.9E+02 0.013 26.2 9.1 119 248-390 127-251 (445)
457 3bo9_A Putative nitroalkan dio 20.1 3.6E+02 0.012 24.9 8.6 84 237-339 91-186 (326)
458 2pcq_A Putative dihydrodipicol 20.1 71 0.0024 29.3 3.5 68 236-315 20-94 (283)
No 1
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=100.00 E-value=2.1e-78 Score=602.90 Aligned_cols=349 Identities=35% Similarity=0.674 Sum_probs=327.8
Q ss_pred CCCCCCcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCc
Q 015201 48 SSSSSSSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDI 127 (411)
Q Consensus 48 ~~~~~~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~ 127 (411)
++++++++||+++|++||++||+|||+|+|||||+|+|++++++.++|.|+|.|||.++|++++++++|++|++++++|+
T Consensus 4 ~~~~~~~~~r~l~al~ge~~dr~Pvw~mrqaGr~lpey~~~r~~~~~f~~~~~~pe~~ae~tl~~~~~~~~Da~i~fsDi 83 (368)
T 4exq_A 4 SMAQTLINDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLERFPLDAAILFSDI 83 (368)
T ss_dssp CSSSCBSCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHHSSHHHHHHSHHHHHHHHHHHHHHSCCSCEECCCCT
T ss_pred ccCCcccchHHHHHHcCCCCCCCCEEeeHhhhhccHHHHHHHhcCCCHHHHHcCHHHHHHHHHHHHHHhCCCEEEecccc
Confidence 34567899999999999999999999999999999999999887767999999999999999999999999999999999
Q ss_pred ccccccCCCeeeecCCCCCccCCCCCChhhhhcCCCCCccc-hHHHHHHHHHHHHHhCC-----ceeEEEecccHHHHHH
Q 015201 128 LTPLPAFGVPFDIEEVRGPVIQSPIRSEEGLKALHHIDLEK-LQFVGDSLKILRKEVGE-----HAAVLGFVGAPWTIAT 201 (411)
Q Consensus 128 ~~~~ea~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~-~~~~~eaik~l~~~~~~-----~~~v~~~~~gPft~a~ 201 (411)
+++++|||+++.|.++.+|++.+||++.+|+++|+.+|+++ ++.++++++++++++++ ++|++|+++||||+++
T Consensus 84 ~~~~ea~G~~v~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~l~~v~eai~~l~~~l~~~~~~~~vpligf~gaP~Tla~ 163 (368)
T 4exq_A 84 LTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLAC 163 (368)
T ss_dssp THHHHHTTTCEEC----CCEESSCCCSHHHHHTCCCCCHHHHSHHHHHHHHHHHHHTBCTTSCBSSCEEEEEECHHHHHH
T ss_pred chhHHHcCCeEEeCCCCCCCCCCCCCCHHHHHhccCCChhHHHHHHHHHHHHHHHHhCCcCcccceeEEEeCCcHHHHHH
Confidence 99999999999999988999888999999999999999866 99999999999999998 8999999999999999
Q ss_pred HHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHH
Q 015201 202 YIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSL 281 (411)
Q Consensus 202 ~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~ 281 (411)
+|++|+++++|++++++|+++||.+|++|+++++.+++|+++|+++|+|+|+++|+|+++|||++|+||++||+|++++.
T Consensus 164 ~l~~g~~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~ 243 (368)
T 4exq_A 164 YMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQ 243 (368)
T ss_dssp HHHHTBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHT
T ss_pred HHHcCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHH
Confidence 99988778889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCC--CCCEEEEecCCcccHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHH
Q 015201 282 VRTKCP--ETPIVLYINGNGGFLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVK 359 (411)
Q Consensus 282 i~~~~~--g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~ 359 (411)
+++.++ ++|+++|+||....++.+.++|+|++++|+.+|+.++++++|++++++||+||..|+||+|+|+++|+++|+
T Consensus 244 l~~~~~g~~~pvi~f~~g~~~~l~~l~~~g~d~i~~d~~~dl~~ak~~~g~~~~l~Gnldp~~L~gt~e~I~~~v~~~l~ 323 (368)
T 4exq_A 244 LKREHDGARVPAIAFTKGGGLWLEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVLD 323 (368)
T ss_dssp SCCEETTEECCEEEEETTCGGGHHHHHTSSCSEEECCTTSCHHHHHHHHTTSSEEEEEECGGGGGSCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCcEEEEcCCcHHHHHHHHHhCCCEEeeCCCCCHHHHHHHhCCCEEEEECCCHHHhCCCHHHHHHHHHHHHH
Confidence 997543 378888888876688999999999999999999999999999999999999999889999999999999999
Q ss_pred HhCC-CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCCC
Q 015201 360 CAGS-RGHILNLGHGVLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 360 ~~~~-~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
.+++ +||||++||+++++||+||++||++++|+||++
T Consensus 324 ~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~~~~ 361 (368)
T 4exq_A 324 SYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHSRA 361 (368)
T ss_dssp HHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHhCHH
Confidence 9985 899999999999999999999999999999865
No 2
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=100.00 E-value=3.6e-73 Score=566.43 Aligned_cols=347 Identities=30% Similarity=0.571 Sum_probs=325.3
Q ss_pred CCCCCCcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCc
Q 015201 48 SSSSSSSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDI 127 (411)
Q Consensus 48 ~~~~~~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~ 127 (411)
..+.+++|||+++|++||++||+|||+++|+|+|+|+|++++.+. ++.+++.||+.+++++++++++|++|++++++|+
T Consensus 9 ~~Mt~~~~er~~~a~~ge~~dr~Pvw~mrqagr~lpey~~~~~~~-~~~e~~~~pe~~~e~~l~~~~~~~~D~~~~~~di 87 (367)
T 1r3s_A 9 QGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQ-DFFSTCRSPEACCELTLQPLRRFPLDAAIIFSGI 87 (367)
T ss_dssp --CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTS-CHHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCT
T ss_pred hhcCcchhHHHHHHHcCCCCCCCceehhhhcCcccHHHHHHhcCC-CHHHHhCCHHHHHHHHHHHHHHhCCCEEEecccc
Confidence 334446799999999999999999999999999999999998888 7999999999999999999999999999999999
Q ss_pred ccccccCCCeeeecCCCCCccCCCCCChhhhhcCCCC-Cccc-hHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHc
Q 015201 128 LTPLPAFGVPFDIEEVRGPVIQSPIRSEEGLKALHHI-DLEK-LQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVE 205 (411)
Q Consensus 128 ~~~~ea~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~-d~~~-~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~g 205 (411)
.+++++||+++.+.++.+|++.+||++.+|+++|+.+ |+++ ++.++++++++++++++++|++++++||||++++|+.
T Consensus 88 ~~~~~a~G~~~~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~~l~~v~eai~~l~~~~~~~~plig~~~~P~tla~~l~e 167 (367)
T 1r3s_A 88 LVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVE 167 (367)
T ss_dssp THHHHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHH
T ss_pred cccHHHcCCeEEeCCCCCCCcCCCCCCHHHHHhccCCCCchhhhhHHHHHHHHHHHHcCCCccEEEEcCcHHHHHHHHHc
Confidence 9999999999999988889888899999999999877 7765 8999999999999999899999999999999999995
Q ss_pred CCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHH-h
Q 015201 206 GGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVR-T 284 (411)
Q Consensus 206 g~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~-~ 284 (411)
|+++++|++++++|+++||.+|++++++++.+++|+++++++|+|+|+++|+|++++||++|+||++||+|++++.++ +
T Consensus 168 gg~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~ 247 (367)
T 1r3s_A 168 GGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKAR 247 (367)
T ss_dssp SSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhh
Confidence 545778999999999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred hCC----CCCEEEEecCCcccHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHH
Q 015201 285 KCP----ETPIVLYINGNGGFLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKC 360 (411)
Q Consensus 285 ~~~----g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~ 360 (411)
+.+ ++|+++|+||+...++++.++|+|++++|+.+|+.++++++|++++++||+||.+|+||+|+|+++|+++|+.
T Consensus 248 ~~~~g~~~~p~i~~~~G~~~~l~~l~~~g~d~i~~d~~~dl~~a~~~~g~~~~l~Gnldp~~L~gt~e~i~~~v~~~l~~ 327 (367)
T 1r3s_A 248 LREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 327 (367)
T ss_dssp HHHTTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHH
T ss_pred hccccCCCCCeEEEcCCcHHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCCCeEEEeCCChHHhcCCHHHHHHHHHHHHHH
Confidence 622 4799999999955899999999999999999999999999999999999999977789999999999999999
Q ss_pred hCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 361 AGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 361 ~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
++++|||+++||+++++||+||+++|++++++|++
T Consensus 328 ~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~~~ 362 (367)
T 1r3s_A 328 FGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSR 362 (367)
T ss_dssp HCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHHHH
T ss_pred hCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 77689999999999999999999999999999975
No 3
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=100.00 E-value=1.2e-71 Score=552.96 Aligned_cols=344 Identities=35% Similarity=0.682 Sum_probs=322.0
Q ss_pred CCcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCccccc
Q 015201 52 SSSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDILTPL 131 (411)
Q Consensus 52 ~~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~~~~~ 131 (411)
+++|||+++|++||++||+|||+++|+|+|+|+|++++++++++.+++.||+.+++++++++++|++|++++++|+.+++
T Consensus 3 ~~~~er~~~a~~g~~~dr~Pv~~mrqagr~~pey~~~~~~~~~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di~~~~ 82 (354)
T 3cyv_A 3 ELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVP 82 (354)
T ss_dssp CCCCCHHHHHHTTCCCSSCCBCCTTCSSTTSHHHHHHHHHHSSHHHHTTCHHHHHHHHHTGGGTSCCSCEECCCCTTHHH
T ss_pred CCchHHHHHHHcCCCCCCCCeeehhhhccccHHHHHHHhccCCHHHHHcCHHHHHHHHHHHHHHhCCCEEeecccccccH
Confidence 57899999999999999999999999999999999888877569999999999999999999999999999999999999
Q ss_pred ccCCCeeeecCCCCCccCCCCCChhhhhcCCCCCccc-hHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCc
Q 015201 132 PAFGVPFDIEEVRGPVIQSPIRSEEGLKALHHIDLEK-LQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTR 210 (411)
Q Consensus 132 ea~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~-~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~ 210 (411)
++||+++.+.++.+|++.+||++.+|+++|+.+++++ ++.++++++.+++++++++|++++++||||++++|++|++++
T Consensus 83 ~a~G~~~~~~~~~gp~~~~pi~~~~d~~~l~~~~~~~~~~~v~eai~~l~~~~~~~~plig~~~~P~tla~~l~~g~~~~ 162 (354)
T 3cyv_A 83 DAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSK 162 (354)
T ss_dssp HTTTSCEEECSSSCEEESSCCCSHHHHHTCCCCCTTTTTHHHHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSCCS
T ss_pred HHcCCeEEeCCCCCCccCCCCCCHHHHHhcCCCChhhhHHHHHHHHHHHHHHhCCCeeEEEeCCcHHHHHHHHhCCCCCc
Confidence 9999999999888898888999999999998767755 899999999999999888999999999999999999876778
Q ss_pred cHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC--CC
Q 015201 211 TYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKC--PE 288 (411)
Q Consensus 211 ~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~--~g 288 (411)
+|++++++|+++||.+|++++++++.+++++++++++|+|+|+++|+|++++||++|+||++||+|++++.+++++ ++
T Consensus 163 ~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~ 242 (354)
T 3cyv_A 163 AFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRR 242 (354)
T ss_dssp SCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEE
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCC
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999763 24
Q ss_pred CCEEEEecCCcc-cHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC-CCe
Q 015201 289 TPIVLYINGNGG-FLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS-RGH 366 (411)
Q Consensus 289 ~~~~~H~CG~~~-~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~-~gf 366 (411)
+| ++|.||+.. .++++.++|+|++++|+.+|+.++++++|++++++||+||..|.||+|+|+++|+++|+.+++ +||
T Consensus 243 ~~-ii~~~~g~~~~l~~l~~~g~d~i~~d~~~dl~~~~~~~g~~~~l~Gn~dp~~l~~t~e~i~~~v~~~l~~~g~~~g~ 321 (354)
T 3cyv_A 243 VP-VTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGH 321 (354)
T ss_dssp CC-EEEECTTTTTTHHHHHTTSCSEEECCTTSCHHHHHHHHTTTSEEECCBCGGGGGSCHHHHHHHHHHHHTTTTTSSCE
T ss_pred CC-EEEECCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHhCCCeEEEecCChHHhCCCHHHHHHHHHHHHHHhCCCCCe
Confidence 77 455566655 789999999999999999999999999999999999999987889999999999999999775 799
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHhcCCC
Q 015201 367 ILNLGHGVLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 367 Ils~gc~i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
|+++||+++++||+||+++|++++++|++.
T Consensus 322 I~~~g~gi~~~~p~env~a~v~~v~~~~~~ 351 (354)
T 3cyv_A 322 VFNLGHGIHQDVPPEHAGVFVEAVHRLSEQ 351 (354)
T ss_dssp EBCBSSCCCTTSCHHHHHHHHHHHHHHHGG
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999999999853
No 4
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=100.00 E-value=1.1e-70 Score=546.05 Aligned_cols=342 Identities=53% Similarity=0.973 Sum_probs=321.9
Q ss_pred CcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCcccccc
Q 015201 53 SSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDILTPLP 132 (411)
Q Consensus 53 ~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~~~~~e 132 (411)
++|||+++|++||++||+|||+++|+|+|+|+|++++.+.+++.+++.||+.+++++++++++|++|++++++|+.++++
T Consensus 10 t~~er~~~a~~g~~~dr~Pv~~mrqagr~lpey~~~~~~~~~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di~~~~~ 89 (353)
T 1j93_A 10 ATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPLS 89 (353)
T ss_dssp -CCCHHHHHHHTCCCSSCCBCCSCCCTTTTTHHHHHHHSSCSTTTTTTCHHHHHHHHHHHHHHHCCSEEECCCCTTTHHH
T ss_pred ChhHHHHHHHCCCCCCcCCeeehHhhccchHHHHHHHhccccHHHHhcCHHHHHHHHHHHHHHhCCCEEEecCCcccCHH
Confidence 57999999999999999999999999999999999998876699999999999999999999999999999999999999
Q ss_pred cCCCeeeecCCCCCccCCCCCChhhhhcCCCCCccc-hHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCcc
Q 015201 133 AFGVPFDIEEVRGPVIQSPIRSEEGLKALHHIDLEK-LQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRT 211 (411)
Q Consensus 133 a~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~-~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~ 211 (411)
+||+++.+.++.+|++.+||++.+|+++|+.+++++ ++.++++++.+++++++++|++++++||||++++|++|+++++
T Consensus 90 a~G~~~~~~~~~gp~~~~pi~~~~d~~~l~~~~~~~~~~~v~e~~~~l~~~~~~~~~~~g~~~~P~tla~~l~~g~~~~~ 169 (353)
T 1j93_A 90 GMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKN 169 (353)
T ss_dssp HTTCCEEEETTTEEEESSCCCSHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHSBCCSS
T ss_pred HcCCeEEecCCCCCeeCCCCCCHHHHHhcCCCChhhhHHHHHHHHHHHHHHhCCCceEEEecChHHHHHHHHHcCCCccc
Confidence 999999999888898888999999999998447655 8999999999999998889999999999999999998766788
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCE
Q 015201 212 YTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPI 291 (411)
Q Consensus 212 ~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~ 291 (411)
|++++++||++||.+|++++++++.+++++++++++|+|+|+++|+|++++||++|+||++||++++++.++++++++|+
T Consensus 170 ~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ 249 (353)
T 1j93_A 170 FTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPL 249 (353)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCE
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987556775
Q ss_pred EEEecCCcc-cHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeC
Q 015201 292 VLYINGNGG-FLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNL 370 (411)
Q Consensus 292 ~~H~CG~~~-~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~ 370 (411)
+|.||+.. .++++.++|+|++++|+.+|+.++++++|++++++||+||..|.||+|+|+++++++++.++++|||+++
T Consensus 250 -ih~c~g~~~~l~~l~~~g~d~~~~d~~~d~~~~~~~~g~~~~l~Gnldp~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~ 328 (353)
T 1j93_A 250 -ILYASGSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHILNL 328 (353)
T ss_dssp -EEECSSCTTTGGGGGGGCCSEEECCTTSCHHHHHHHTCSSSEEECCBCGGGGGSCHHHHHHHHHHHHHHHCSSSEEBCB
T ss_pred -EEECCChHHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCCCeEEEecCCHHHHcCCHHHHHHHHHHHHHHhCCCCEEEeC
Confidence 59998877 6899999999999999999999999999999999999999767899999999999999998778999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 371 GHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 371 gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
||++++++|+||+++|++++++||+
T Consensus 329 g~gi~~~~~~enl~a~ve~v~~~~~ 353 (353)
T 1j93_A 329 GHGIKVGTPEENFAHFFEIAKGLRY 353 (353)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999974
No 5
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.1e-70 Score=542.71 Aligned_cols=335 Identities=30% Similarity=0.598 Sum_probs=314.3
Q ss_pred CcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCcccccc
Q 015201 53 SSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDILTPLP 132 (411)
Q Consensus 53 ~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~~~~~e 132 (411)
|+|||+++|++||++||+|||+++|+|+|+|+|++++.+++++.+++.||+.+++++++++++||+|++++++|+.++++
T Consensus 2 t~~er~~~a~~g~~~dr~Pv~~mrqagr~lpe~~~~~~~~~~~~~~~~~pe~~~e~~~~~~~~~~~D~~~~~~di~~~~~ 81 (338)
T 2eja_A 2 PKNDLLLRSLRGEPIGRFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPLKILGVDAIIIFSDILVPLE 81 (338)
T ss_dssp CCCCHHHHHHTTCCCSSCCBCCTTCSSTTSHHHHHHHTTSSSHHHHHHCHHHHHHHHHHHHHHHCCSCEECSCCTTGGGG
T ss_pred CchHHHHHHHcCCCCCCCCcchhhhhccccHHHHHHHhccccHHHHhCCHHHHHHHHHHHHHHhCCCEEEeccCcceeHH
Confidence 57999999999999999999999999999999999998886799999999999999999999999999999999999999
Q ss_pred cCCCeeeecCCCCCccCCCCCChhhhhcCCCCCccchHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccH
Q 015201 133 AFGVPFDIEEVRGPVIQSPIRSEEGLKALHHIDLEKLQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTY 212 (411)
Q Consensus 133 a~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~ 212 (411)
+||+++.+.++.+|.+ ++.+|+++|+.++++.++.++++++.+++++ +++|++++++||||++++|++|+++++|
T Consensus 82 a~G~~~~~~~~~gP~i----~~~~d~~~l~~~~~~~l~~v~eai~~l~~~~-~~~plig~~~~P~tla~~l~egg~~~~~ 156 (338)
T 2eja_A 82 PLGVKVEFVEGEGPKL----SWSGKVSDLKKYDPSQNAYVYEIIKRVKEAQ-DEVPVIGFAGAPFTLLSYLIEGGASKDF 156 (338)
T ss_dssp GGTCEEEEETTTEEEE----ECCSCGGGSCCCCGGGGHHHHHHHHHHHHHC-CSSCEEEEEECHHHHHHHHHHTSCCSSC
T ss_pred HcCCeEEeCCCCCCCC----CCHHHHHhcCCCChhhhHHHHHHHHHHHHHh-cCccEEEecchHHHHHHHHHcCCCCccH
Confidence 9999999998777754 7789999998777733999999999999998 6799999999999999999965556789
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEE
Q 015201 213 TTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIV 292 (411)
Q Consensus 213 e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~ 292 (411)
++++++|+++||.+|++++++++.+++|+++++++|+|+|+++|+|+++|||++|+||++||+|++++.++++ +|+|++
T Consensus 157 ~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i 235 (338)
T 2eja_A 157 KSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVI 235 (338)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEE
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987 468999
Q ss_pred EEecCCcccHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC-CCeEEeCC
Q 015201 293 LYINGNGGFLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS-RGHILNLG 371 (411)
Q Consensus 293 ~H~CG~~~~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~-~gfIls~g 371 (411)
+|+||+...++++.++|+|++++|+.+|+.++++++ +++++||+||.+|+||+|+|+++|+++|+.+++ +|||+++|
T Consensus 236 ~~~~g~~~~l~~l~~~g~d~~~~d~~~dl~~~~~~~--~~~l~Gn~dp~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~g 313 (338)
T 2eja_A 236 YFFRGSSSFIDLAVDYRADALSVDWSVDIPELFKIY--DKGFQGNLEPAVLYASEEVIEEKTLGLLRRIPVKTRYVFNLG 313 (338)
T ss_dssp EEESSHHHHHHHHTTSCCSEEECCTTSCHHHHHHHC--CSEEECCBCGGGGGSCHHHHHHHHHHHHTTCCCSSSEEBCBS
T ss_pred EEcCCcHHHHHHHHHcCCCEEEeCCCCCHHHHHHhC--CeEEEECCCHHHhcCCHHHHHHHHHHHHHHhCCCCCeEEeCC
Confidence 999999447899999999999999999999999999 689999999977789999999999999999776 79999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 372 HGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 372 c~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
|+++++||+||+++|++++++||.
T Consensus 314 ~gi~~~~p~en~~a~v~~v~~~~~ 337 (338)
T 2eja_A 314 HGLAPDMELEKVKYLVDLVKSFPL 337 (338)
T ss_dssp SCCCTTSCHHHHHHHHHHHHTCCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999985
No 6
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=5e-70 Score=542.32 Aligned_cols=339 Identities=32% Similarity=0.613 Sum_probs=318.9
Q ss_pred CCcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeeccCccccc
Q 015201 52 SSSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFSDILTPL 131 (411)
Q Consensus 52 ~~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~d~~~~~ 131 (411)
-+++||+++|++||++||+|||+++|+|+|+|+|++++.+. ++.+++.||+.+++++++++++|++|++++++|+.+++
T Consensus 11 ~t~~er~~~al~g~~~dr~Pvw~mrqagr~lpey~~~~~~~-~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di~~~~ 89 (359)
T 2inf_A 11 ETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKY-GLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPL 89 (359)
T ss_dssp -CCCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSCEECCCCTTTTG
T ss_pred CChHHHHHHHHcCCCCCcCCEeehhhhCcccHHHHHHHcCC-CHHHHhCCHHHHHHHHHHHHHHhCCCEEEecccccccH
Confidence 37899999999999999999999999999999999988887 69999999999999999999999999999999999999
Q ss_pred ccCCCeeeecCCCCCccCCCCCChhhhhcCCCCCccc-hHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCc
Q 015201 132 PAFGVPFDIEEVRGPVIQSPIRSEEGLKALHHIDLEK-LQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTR 210 (411)
Q Consensus 132 ea~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~-~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~ 210 (411)
++||+++.+.++.+|++.+||++.+|+++|+.+++++ ++.++++++.+++++ +++|++++++||||++++|++|++++
T Consensus 90 ~a~G~~~~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~l~~~~ea~~~l~~~~-~~~~l~g~~~~P~tla~~l~~gg~s~ 168 (359)
T 2inf_A 90 PSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQ-LNVPLIGFSGAPFTLASYMTEGGPSK 168 (359)
T ss_dssp GGGTCCEECCSSSCCEESSCCCSHHHHHTCCCCCHHHHSHHHHHHHHHHHHHT-CSSCEEEEEECHHHHHHHHHHCSCCS
T ss_pred HHcCCEEEecCCCCCCcCCCCCCHHHHHhcCCCCccchHHHHHHHHHHHHHHh-CCcceEEEcCcHHHHHHHHHcCCCcc
Confidence 9999999999888998888999999999998767755 899999999999999 67899999999999999999654567
Q ss_pred cHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 015201 211 TYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETP 290 (411)
Q Consensus 211 ~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~ 290 (411)
+|++++++||++||.+|++++++++.+++++++++++|+|+|+++|+|++++||++|+||++||++++++.+++. ++|
T Consensus 169 ~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~--g~~ 246 (359)
T 2inf_A 169 NYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVP 246 (359)
T ss_dssp SCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSC
T ss_pred cHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc--CCc
Confidence 899999999999999999999999999999999999999999999999999999999999999999999999987 689
Q ss_pred EEEEecCCcccHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCC-CeEEe
Q 015201 291 IVLYINGNGGFLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSR-GHILN 369 (411)
Q Consensus 291 ~~~H~CG~~~~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~-gfIls 369 (411)
+++|+||+...++++.++|+|++++|+.+|+.+++++ |++++++||+||..|.||+|+|+++|+++++...++ |||++
T Consensus 247 ~i~~~~G~~~~l~~l~~~g~d~~~~d~~~d~~~~~~~-g~~~~l~Gnldp~~l~~t~e~I~~~v~~~l~~~~~~~g~Il~ 325 (359)
T 2inf_A 247 LIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFN 325 (359)
T ss_dssp EEEECTTCGGGHHHHHTSSCSEEECCTTSCHHHHHHT-TCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEEBC
T ss_pred EEEEcCCcHHHHHHHHHhCCCEEEeCCCCCHHHHHHc-CCCEEEEecCChHHhcCCHHHHHHHHHHHHHhCCCCCCeEEe
Confidence 9999999955889999999999999999999999999 999999999999767899999999999999994345 99999
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 370 LGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 370 ~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+||++++++|+||+++|++++++|++
T Consensus 326 ~gcgi~~~~~~enl~a~ve~v~~~~~ 351 (359)
T 2inf_A 326 LGHGVFPDVSPEVLKKLTAFVHEYSQ 351 (359)
T ss_dssp BSSCCCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999974
No 7
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=100.00 E-value=9.5e-67 Score=516.61 Aligned_cols=328 Identities=22% Similarity=0.332 Sum_probs=290.1
Q ss_pred cCCCCC-CcHHHHHHHHcCCCCCCcccccchhhhhhHHHHHHHHccCCChhHhhcCHHHHHHhhhhhHHHhCCCEEeecc
Q 015201 47 SSSSSS-SSDPLLVKAAKGHPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVQISLQPWEAFHPDGVIIFS 125 (411)
Q Consensus 47 ~~~~~~-~~rERv~~al~gk~~DRvPv~~~~~a~~~~~~y~~~~~~~~~~~e~~~d~e~~ae~~~~~~~~f~~D~~~~~~ 125 (411)
|+.++. |+|||+++|++||++||+|||+|+|+| +++|++++ +. ++.+++.|||.++|++++++++||+|++++++
T Consensus 7 m~~M~~MT~kER~l~al~ge~~DR~Pvw~mrqag--~~e~~~~~-~~-~f~e~~~~pe~~ae~tl~~~~~~~~Da~iifs 82 (348)
T 4ay7_A 7 MTDMSEFTLKTRLLAALKGEPVDKVPVCSVTQTG--IVELMDVV-GA-PWPEAHTNPELMAKLALANHELSGLEAVRLPY 82 (348)
T ss_dssp -----CCCHHHHHHHHHHTCCCSSCCBCCSSCCC--CHHHHHHH-TC-CTTHHHHCHHHHHHHHHHHHHTTCCSSEEECS
T ss_pred ccccccCCHHHHHHHHHcCCCCCCCCEEechhhh--HHHHHHHh-CC-CHHHHhCCHHHHHHHHHHHHHHhCCCEEEecC
Confidence 445554 689999999999999999999999987 57787765 33 69999999999999999999999999999999
Q ss_pred CcccccccCCCeeeecC-CCCCcc-CCCCCChhhhhcCCCCC-c--cc-hHHHHHHHHHHHHHhCCceeEEEecccHHHH
Q 015201 126 DILTPLPAFGVPFDIEE-VRGPVI-QSPIRSEEGLKALHHID-L--EK-LQFVGDSLKILRKEVGEHAAVLGFVGAPWTI 199 (411)
Q Consensus 126 d~~~~~ea~G~~~~~~~-~~~p~~-~~pi~~~eD~~~l~~~d-~--~~-~~~~~eaik~l~~~~~~~~~v~~~~~gPft~ 199 (411)
|+++++++||+++.|.+ +.+|.+ .+++.+ |++.+..++ + +. ++.++++++++++++++++|++|+++||||+
T Consensus 83 Dil~~~ea~G~~v~~~~~~~~P~v~~~~~~~--~~~~~~~~~~~~~~~~l~~v~eai~~l~~~l~~~~pligf~g~P~Tl 160 (348)
T 4ay7_A 83 CLTVLVEAMGCEINMGTKNRQPSVTGHPYPK--DLEGAAVPADLLQRGRIPVVLEAIKIIREKVGPDVPIVGGMEGPVTV 160 (348)
T ss_dssp CSCHHHHHTTCEEECCBTTBCCEEEECSCSS--CCTTCCCCTTGGGSTTHHHHHHHHHHHHHHHCTTSCEEEEEECHHHH
T ss_pred ccccchHHcCCeEEecCCCCCCccccCCCcc--hHHHhhCCccccchhhHHHHHHHHHHHHHHhCCCeeEEEeccchHHH
Confidence 99999999999999954 556754 556543 444444432 2 22 8999999999999999999999999999999
Q ss_pred HHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHH
Q 015201 200 ATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIRE 277 (411)
Q Consensus 200 a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~ 277 (411)
+++++| .++++++++++||.+|++|+++++.+++|+++|+++|+|+|+++|+|++ +|||++|++|++||+|+
T Consensus 161 a~~l~~------~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~ 234 (348)
T 4ay7_A 161 ASDLVS------VKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQK 234 (348)
T ss_dssp HHHHHC------HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHH
T ss_pred HHhccc------chHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHH
Confidence 999998 4788999999999999999999999999999999999999999999997 89999999999999999
Q ss_pred HHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCCcEEEcCCCC-CHHHHHHHhCCCeeEEccCCcC-cc-CCCHHHHHHH
Q 015201 278 IVSLVRTKCPETPIVLYINGNGG-FLERMKGTGVDVIGLDWTV-DMADGRKRLGNDISVQGNVDPA-CL-FSPLPALTDE 353 (411)
Q Consensus 278 i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~d~l~~d~~~-di~~~~~~~g~~~~l~G~vd~~-~L-~gt~eeV~~e 353 (411)
+++.+++ . .++|+||+.. .++++.++|+|++++|+.+ ++.++|+.+|++++++||+||. .| .||+|+|+++
T Consensus 235 i~~~~~~----~-~iih~~g~~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g~~~~l~Gnldp~~~l~~g~~e~i~~~ 309 (348)
T 4ay7_A 235 FASSVNS----V-TVLHICGNVNPILSDMADCGFEGLSVEEKIGSAKKGKEVIGTRARLVGNVSSPFTLLPGPVDKIKAE 309 (348)
T ss_dssp HHHHSSS----E-EEEECCSCCHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHTTSSEEEEEECCCCCCTTCCHHHHHHH
T ss_pred HHhhccC----C-cEEEecCCcHHHHHHHHHhccccccccchhhHHHHHHHHhCCCEEEEcCCCChHhhcCCCHHHHHHH
Confidence 9999963 3 5789999988 6899999999999999876 6899999999999999999986 34 5999999999
Q ss_pred HHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 354 IQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 354 v~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
|+++++ ++|||+++||+++++||+||++||++++|+|.
T Consensus 310 v~~~l~---~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~ 347 (348)
T 4ay7_A 310 AKEALE---GGIDVLAPGCGIAPMTPLENVKALVAARDEFY 347 (348)
T ss_dssp HHHHHH---TTCSEEEESSSCCTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHh---CCCCEEeCCCccCCCCCHHHHHHHHHHHHHhc
Confidence 999997 35899999999999999999999999999995
No 8
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=99.70 E-value=4.7e-17 Score=174.41 Aligned_cols=205 Identities=15% Similarity=0.080 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++.+++..+ .|+.+++.||+|++.++++. ++...+++++.+++.+.+.++.+.++|++.
T Consensus 524 ~ve~~~~l~~~t~--~pvK~~l~GP~Tl~~~~~~r---------------~~~~~~el~~~lA~a~~~ei~~L~~aG~~~ 586 (755)
T 2nq5_A 524 TVEETVYAQSLTD--RPVKGMLTGPITITNWSFER---------------TDIPRDQLFNQIGLAIKDEIKLLENAGIAI 586 (755)
T ss_dssp SHHHHHHHHHTCS--SCBEEEEECHHHHHHHSBCC---------------SSSCHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcC--CCeEEEecCHHHHHHHHhcc---------------CcccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 4567777777654 36789999999999887641 122567899999999999999999999999
Q ss_pred EEEecCCCC--C----CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEEEcCCCC-CHH
Q 015201 252 IQIFDSWGG--Q----LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVIGLDWTV-DMA 322 (411)
Q Consensus 252 i~i~D~~~~--~----iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l~~d~~~-di~ 322 (411)
|++.|+..+ + ++++.|.+++.+.++++++.++. +..+.+|+| |+.. .++.+.++++|+++++... |+.
T Consensus 587 IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~---~~~i~~HiC~G~~~~i~~~L~~~~aD~islE~~rsd~e 663 (755)
T 2nq5_A 587 IQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKD---ETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGD 663 (755)
T ss_dssp EEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCT---TSEEEEEECCSCCSTTHHHHHHHCCSEEEC--------
T ss_pred EEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEeccCCcHHHHHHHHhCCCCEEEEecCCCCHH
Confidence 999997542 3 67889999999999999988753 456899999 9887 6799999999999998533 565
Q ss_pred HHHHHh--C-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHH---HHHHHHHHHHhcCC
Q 015201 323 DGRKRL--G-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEE---AVAHFFEVGKSMKY 395 (411)
Q Consensus 323 ~~~~~~--g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~E---ni~a~~~a~~~yg~ 395 (411)
.++... + ++.++.|++|+... ..|+|+|++.++++++..+..+++++|+|++..-++.+ ++++|+++++++..
T Consensus 664 ~L~~~~~~~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~a~~~v~~e~l~lsPdCGl~t~t~~e~~~kL~~mveaA~~vr~ 743 (755)
T 2nq5_A 664 IIESFETAVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEVRQ 743 (755)
T ss_dssp -----------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCeEEEeeccCccCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 555532 1 45789999999875 59999999999999998776789999999999888884 99999999998864
Q ss_pred C
Q 015201 396 D 396 (411)
Q Consensus 396 ~ 396 (411)
.
T Consensus 744 ~ 744 (755)
T 2nq5_A 744 K 744 (755)
T ss_dssp C
T ss_pred H
Confidence 3
No 9
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=99.69 E-value=1.2e-16 Score=171.74 Aligned_cols=204 Identities=14% Similarity=0.072 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++.+++..+ .|+.+++.||+|++.++++. ++...+++++.+++.+.+.++.+.++|++.
T Consensus 539 ~ve~~~~l~~~~~--~pvK~~l~GP~Tl~~~~~~r---------------~~~~~~~l~~~lA~a~~~ev~~L~~aG~~~ 601 (765)
T 1u1j_A 539 TVFWSAMAQSMTS--RPMKGMLTGPVTILNWSFVR---------------NDQPRHETCYQIALAIKDEVEDLEKGGIGV 601 (765)
T ss_dssp STHHHHHHTTSCS--SCBEEEEECHHHHHHTSEEC---------------TTSCHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhc--CCeEEEecCHHHHHHHHhcc---------------CcCcHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3456666766553 36789999999999877641 122568899999999999999999999999
Q ss_pred EEEecCCCC--C----CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEEEcCCCC-CHH
Q 015201 252 IQIFDSWGG--Q----LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVIGLDWTV-DMA 322 (411)
Q Consensus 252 i~i~D~~~~--~----iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l~~d~~~-di~ 322 (411)
|++.|+... + ++++.|.+++.+.++++++.++. +..+.+|+| |+.. .++.+.++++|+++++... |+.
T Consensus 602 IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~---~~~i~~HiC~G~~~~i~~~l~~~~~D~islE~~rs~~e 678 (765)
T 1u1j_A 602 IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD---STQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEK 678 (765)
T ss_dssp EEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCS---SSEEEEECSCSCCTTTHHHHHTTCCSEEECCBSSSCTT
T ss_pred EEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEeccCCcHHHHHHHHhCCCCEEEEeCCCCCHH
Confidence 999997543 3 67899999999999999988753 456899999 9887 6799999999999998533 666
Q ss_pred HHHHHh---C-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHH---HHHHHHHHHHhcC
Q 015201 323 DGRKRL---G-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEE---AVAHFFEVGKSMK 394 (411)
Q Consensus 323 ~~~~~~---g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~E---ni~a~~~a~~~yg 394 (411)
.++... + ++.++.|+||+... ..|+|+|.+.++++++..+..+++++|+|++..-++.+ ++++|+++++++.
T Consensus 679 ~L~~~~~~~~~~~~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~e~l~lsPdCGl~t~t~~e~~~kL~~mveaA~~vr 758 (765)
T 1u1j_A 679 LLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLIR 758 (765)
T ss_dssp GGGGGTTTTCCCSEECCBSSCTTSSSCCTHHHHHHHHHHHHHSSCSTTBCBBCSSCSSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCeEEEeecCCccCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 665542 2 56888999999875 59999999999999998877889999999999888884 9999999999886
Q ss_pred C
Q 015201 395 Y 395 (411)
Q Consensus 395 ~ 395 (411)
.
T Consensus 759 ~ 759 (765)
T 1u1j_A 759 S 759 (765)
T ss_dssp H
T ss_pred H
Confidence 4
No 10
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=99.65 E-value=4.9e-16 Score=154.35 Aligned_cols=211 Identities=14% Similarity=0.069 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHhCCcee-EEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 172 VGDSLKILRKEVGEHAA-VLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~-v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
..+.++.+++..++ .| +.+++.||++++..+... ++ .| ++.++++++.+++.+.+.++.+.++|++
T Consensus 116 ~~~~~~~l~~~~~~-~~~vK~~l~gP~tl~~~~~~~------~~----~Y--~~~~~~l~~~la~a~~~ei~~l~~aG~~ 182 (375)
T 1ypx_A 116 FIEDFIFLKEAVGD-NHVAKQTIPSPAMLHYRGDIE------YQ----PY--LDDAEKFANDLATAYQKAIQAFYDAGCR 182 (375)
T ss_dssp HHHHHHHHHHHHCS-SSEECEEEECTHHHHHHEEEC------SH----HH--HHCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhcC-CCceEEecCCHHHHHHHHhcc------hh----hc--cChHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 56777888887754 34 588899999999887641 12 23 2445889999999999999999999999
Q ss_pred EEEEecCCC-CCC-------------CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-----------CCcc-cHhH
Q 015201 251 CIQIFDSWG-GQL-------------PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-----------GNGG-FLER 304 (411)
Q Consensus 251 ~i~i~D~~~-~~i-------------Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-----------G~~~-~l~~ 304 (411)
.|++.|+.. .++ +++.|.+++.+.++++++.+.+ +..+.+|+| |+.. .++.
T Consensus 183 ~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~---~~~i~~HiC~gn~~s~~~~~g~~~~i~~~ 259 (375)
T 1ypx_A 183 YLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPA---DMVITMHICRGNFRSTWIAEGGYGPVAET 259 (375)
T ss_dssp EEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCT---TCEEEEEECCC----------CCSGGGHH
T ss_pred EEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEEeccccCCccccccchHHHHHH
Confidence 999999743 244 6789999999999999887753 357899999 4555 6799
Q ss_pred Hh-cCCCcEEEcCCC---C-CHHHHHHHhC-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC--
Q 015201 305 MK-GTGVDVIGLDWT---V-DMADGRKRLG-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVL-- 375 (411)
Q Consensus 305 ~~-e~g~d~l~~d~~---~-di~~~~~~~g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~-- 375 (411)
+. ++++|+++++.. . +++.+++.-. ++.++.|.||+... ..|+|+|++.++++++..+...++++|+|++.
T Consensus 260 l~~~~~~d~i~lE~~~~r~g~~e~L~~~~~~~~~v~lGvvd~~~~~~e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~s~ 339 (375)
T 1ypx_A 260 LFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFAST 339 (375)
T ss_dssp HHTTCCCSEEEEECCSCC---CCTTCCCCCTTCEEEEEEECSSSCC-CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC--
T ss_pred HHhhCCCCEEEEEecCCCCCcHHHHHHhhhcCCeEEEeeecCcCCCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccc
Confidence 98 999999998732 2 3444443221 56888999999875 59999999999999999876789999999998
Q ss_pred ----CCCc---HHHHHHHHHHHHhcCCCCC
Q 015201 376 ----VGTP---EEAVAHFFEVGKSMKYDNS 398 (411)
Q Consensus 376 ----~~tp---~Eni~a~~~a~~~yg~~~~ 398 (411)
.-++ .+++++|++++++....+.
T Consensus 340 ~~g~~~t~~~a~~kL~~~v~~A~~~~~~~~ 369 (375)
T 1ypx_A 340 EEGNILTEEEQWDKLRYVVRLANDIWGELE 369 (375)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHSCC--
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHhchh
Confidence 7777 8899999999999875443
No 11
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=99.55 E-value=8.6e-14 Score=136.94 Aligned_cols=198 Identities=11% Similarity=0.127 Sum_probs=153.6
Q ss_pred HHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 015201 174 DSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQ 253 (411)
Q Consensus 174 eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~ 253 (411)
+.++.+++..+ .|+.+++.||.+++..... ..|.+. .++++.+++.+.+.++.+.++|++.|+
T Consensus 127 ~~~~~~~~~t~--~~vK~~lpgP~t~~~~~~~------------~~y~~~---~e~~~dlA~a~~~ei~~l~~aG~~~IQ 189 (357)
T 3rpd_A 127 EDAKFLRKQTT--QPIKWALPGPMTMIDTLYD------------DHYKSR---EKLAWEFAKILNEEAKELEAAGVDIIQ 189 (357)
T ss_dssp HHHHHHHHHCS--SCBEEEEECHHHHHTSSEE------------SSSCCH---HHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhhcc--CCceEEeCCHHHHHHHhhh------------ccCCCH---HHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 44566666553 4788999999998754332 113333 477888889999999999999999999
Q ss_pred EecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-C------------------Ccc-cHhHHhcCCCcEE
Q 015201 254 IFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-G------------------NGG-FLERMKGTGVDVI 313 (411)
Q Consensus 254 i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G------------------~~~-~l~~~~e~g~d~l 313 (411)
+.|+.-+. .++.|.++..+.++++++.++ ..+.+|+| | ... .++.+.++++|++
T Consensus 190 iDeP~l~~-~~~~~~~~~v~~~n~~~~~~~-----~~~~iHiC~G~~~~~n~d~~~t~~~~~g~y~~i~~~l~~~~~D~i 263 (357)
T 3rpd_A 190 FDEPAFNV-FFDEVNDWGIACLERAIEGLK-----CETAVHICYGYGIKANTDWKKTLGSEWRQYEEVFPKLQKSNIDII 263 (357)
T ss_dssp EECGGGGT-CHHHHHHTHHHHHHHHHTTCC-----SEEEEEECSCCSSHHHHHHHTTSCSCCCGGGGTHHHHHHSSCCEE
T ss_pred ecCccccc-cHHHHHHHHHHHHHHHHhCCC-----CceEEEEecCCccCCccccccccccccCcHHHHHHHHHhCCCCEE
Confidence 99975442 467888888888888887664 24678999 3 334 5788999999999
Q ss_pred EcCCCCCH--HHHHHHhCCCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCc---HHHHHHHH
Q 015201 314 GLDWTVDM--ADGRKRLGNDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTP---EEAVAHFF 387 (411)
Q Consensus 314 ~~d~~~di--~~~~~~~g~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp---~Eni~a~~ 387 (411)
+++...+- .++.+.+.++.++.|.||.... ..++|+|.+.++++++..+....+++|+|++.+-++ .+++++|+
T Consensus 264 ~lE~~~~r~~~e~l~~~~~k~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~~~l~lsPdCGl~~~~~~~a~~kL~~mv 343 (357)
T 3rpd_A 264 SLECHNSHVPMELLELIRGKKVMVGAIDVATDTIETAEEVADTLRKALKFVDADKLYPCTNCGMTPLSHQVTRGKLNALS 343 (357)
T ss_dssp EECCTTCCCCGGGGGGGTTSEEEEECSCTTCSSCCCHHHHHHHHHHHHTTSCGGGEEEECSSCCTTSCHHHHHHHHHHHH
T ss_pred EEEecCCCCChHHHHhcCCCEEEeccccCcCCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHHH
Confidence 99754321 2556667788899999999864 589999999999999988778999999999987666 57999999
Q ss_pred HHHHhcC
Q 015201 388 EVGKSMK 394 (411)
Q Consensus 388 ~a~~~yg 394 (411)
++++...
T Consensus 344 ~aa~~~r 350 (357)
T 3rpd_A 344 AGAEIVR 350 (357)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 12
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=99.34 E-value=8.2e-12 Score=132.26 Aligned_cols=201 Identities=16% Similarity=0.181 Sum_probs=145.6
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
++.++.+++ +++ .|+.+.+.||+|++...... +....+++++.++....+.++.+.++|++.|
T Consensus 544 lde~~~Aks-l~~-~pvK~~LtGPvTlL~ls~~r---------------~d~~r~ell~dLA~ayreeI~~L~~AGa~~I 606 (766)
T 1t7l_A 544 LKEITYAQS-LTE-KPVKGMLTGPVTIMSWSYYR---------------EDIPEREIAYQIALAINEEVKDLEEAGIKIV 606 (766)
T ss_dssp HHHHHHHHH-TCS-SCBEEEEECHHHHHHTSEEC---------------SSSCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHH-hcC-CCeEEEEeCHHHHHHHhhcc---------------CCCCHHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 455666655 444 45788899999998764420 1113467888999999999999999999999
Q ss_pred EEecCCCC-CCCH-----HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEEEcCCCC---CH
Q 015201 253 QIFDSWGG-QLPP-----HMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVIGLDWTV---DM 321 (411)
Q Consensus 253 ~i~D~~~~-~iSp-----~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l~~d~~~---di 321 (411)
++.|+.-. .+++ +.+.+++.+.+++. +.+.. +..+.+|+| |+.. .++.+.++++|++++|..- ++
T Consensus 607 QIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a-~gv~~---~~~I~lH~C~G~~~di~~~L~~l~VD~IsLE~~Rs~~el 682 (766)
T 1t7l_A 607 QIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARP---ETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEI 682 (766)
T ss_dssp EEECTHHHHTSCSSGGGHHHHHHHHHHHHHHH-TCCCT---TSEEEEECCCSCCTTTHHHHTTSCCSEEEEECTTTTTGG
T ss_pred EEcCCcccccCCCcchhHHHHHHHHHHHHHHh-hcCCC---CceEEEEEecCchHHHHHHHHcCCCCEEEEecCCCchhH
Confidence 99997432 3333 34555555555444 43321 456889999 8776 6899999999999997432 23
Q ss_pred HHHHHHh-C-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcH---HHHHHHHHHHHhcC
Q 015201 322 ADGRKRL-G-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPE---EAVAHFFEVGKSMK 394 (411)
Q Consensus 322 ~~~~~~~-g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~---Eni~a~~~a~~~yg 394 (411)
.+..+.+ + ++....|.||.... ..++|++.+.++++.+..+...++++|+|++..-++. ++++.|++++++..
T Consensus 683 L~~l~~~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~~a~~~Vg~erL~VsPdCGL~~~p~~e~~~kLk~mvaaAkevr 761 (766)
T 1t7l_A 683 ISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEMR 761 (766)
T ss_dssp GHHHHTSTTCCSEEEEECSCTTSCSCCCHHHHHHHHHHHTTTSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCeEEEEEECCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3333323 1 35788999999765 5999999999999988776567999999999876655 78999999988765
No 13
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=99.25 E-value=6.7e-11 Score=127.17 Aligned_cols=184 Identities=14% Similarity=0.105 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCH-H-HHHHHHHHHHHHHHHHHHHHHHhC
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAP-H-VLRTLLSHLTQAIADYIIYQVESG 248 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~P-e-~v~~ll~~~~d~~~~~~~~~~e~G 248 (411)
..++.++.+++. | +++...+.||+|++ +++ + ...+.+ + ..+++++.+++...++++.+.++|
T Consensus 136 ~~l~~~~~ak~~-g--~~~K~~l~GP~Tll--~l~----k-------~~~~~~~~~~~~~ll~~L~~~y~~~l~~L~~aG 199 (765)
T 1u1j_A 136 KAVNEYKEAKAL-G--VDTVPVLVGPVSYL--LLS----K-------AAKGVDKSFELLSLLPKILPIYKEVITELKAAG 199 (765)
T ss_dssp HHHHHHHHHHHT-T--CCCEEEEECHHHHH--HTC----E-------ECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHhc-C--CCceEEECCHHHHH--Hhh----h-------cccccCccCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 466777777654 3 55677889999999 333 0 001112 2 246788888888899999999999
Q ss_pred CCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc--cHhHHhcCC-CcEEEcCCCC---C
Q 015201 249 AHCIQIFDSWG-GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG--FLERMKGTG-VDVIGLDWTV---D 320 (411)
Q Consensus 249 ~d~i~i~D~~~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~--~l~~~~e~g-~d~l~~d~~~---d 320 (411)
++.|++.|+.. ..++++. .+.+.+.++.+.+.+ ++.++.+|+| |+.. .++.+.++| +|++++|... +
T Consensus 200 ~~~VQiDEP~L~~~l~~~~-~~~~~~a~~~l~~~~----~~~~i~lhtc~G~~~~~~~~~l~~l~~vd~l~lD~v~~~~~ 274 (765)
T 1u1j_A 200 ATWIQLDEPVLVMDLEGQK-LQAFTGAYAELESTL----SGLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKT 274 (765)
T ss_dssp CCEEEEECGGGGSCCCHHH-HHHHHHHHHHSTTTT----CSSEEEEECCSSCCCHHHHHHHTTCTTCCEEEEESSSCTTH
T ss_pred CCEEEEcCCccccCCCHHH-HHHHHHHHHHHHhhc----CCCeEEEEeCCCCcchHHHHHHHcCCCCcEEEEEecCCccc
Confidence 99999999754 4677754 666666665554332 1457899999 8876 479999999 9999997532 4
Q ss_pred HHHHHHHhC-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 321 MADGRKRLG-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 321 i~~~~~~~g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
+..+++.++ ++..+.|.||...+ ..+++++.+.++++.+..+....+++|+|++.
T Consensus 275 l~~l~~~l~~~k~L~lGvVdgrni~~~d~e~v~~~l~~~~~~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 275 LDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHCCSSCEEEEESSCGG
T ss_pred HHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHHhcCCCcEEEcCCCCcc
Confidence 777777676 56888999999765 69999999999999988765679999999986
No 14
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=99.23 E-value=9.1e-11 Score=125.82 Aligned_cols=178 Identities=13% Similarity=0.054 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
..++.++..++.+| +++.+.+.||+|++....+ ++ .++++++.+++...++++.+.++|++
T Consensus 136 ~~l~~~~eA~~~~g--~~vK~vl~GP~Tla~l~k~----------------~~-~~~dll~~L~~~y~~~l~~L~~~Ga~ 196 (755)
T 2nq5_A 136 RLLDLYLEAREVVG--DKAKPVITGPITYVALSTG----------------VE-DFTAAVKSLLPLYKQVFTELVKAGAS 196 (755)
T ss_dssp HHHHHHHHHHHHHG--GGEEEEEECHHHHHHTCBS----------------CS-CHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhcC--CCcEEEEccHHHHHHHhcC----------------Cc-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 34455555555554 5678889999999974211 12 24588888999999999999999999
Q ss_pred EEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-cCCcccHhHHhcCCCcEEEcCCCCC----HHHH
Q 015201 251 CIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-NGNGGFLERMKGTGVDVIGLDWTVD----MADG 324 (411)
Q Consensus 251 ~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-CG~~~~l~~~~e~g~d~l~~d~~~d----i~~~ 324 (411)
.|++.||... -++++ +++.+.+.++++...+. +.++++|+ ||+...++.+.++|+|++++|.... +..+
T Consensus 197 ~VQiDEP~L~~dl~~~-~~~~~~~ay~~l~~~~~----~~~v~lhtyfG~~~~~~~l~~l~vd~l~lD~v~~~~~~l~~l 271 (755)
T 2nq5_A 197 YIQVDEPIFVTDEGKD-YLQAAKAVYAYFAKEVP----DAKFIFQTYFEGLIDSQVLSQLPVDAFGLDFVYGLEENLEAI 271 (755)
T ss_dssp EEEEECGGGGSSGGGG-GHHHHHHHHHHHHHHST----TCEEEEECCSSCCTTHHHHTTSSCSEEEEESSSSHHHHHHHH
T ss_pred EEEEeCCcccCCCCHH-HHHHHHHHHHHHHhccc----CCcEEEEEeCCChHHHHHHHhCCCCEEEEEecCCChhhHHHH
Confidence 9999998653 45655 89999999998875441 24677787 7886677999999999999985332 3356
Q ss_pred HHHhC-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 325 RKRLG-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 325 ~~~~g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
++.++ ++...+|.||...+ ..+++++.+.++++++. ....+++|+|++
T Consensus 272 ~~~~~~~k~L~~GvVdgrniw~~d~e~v~~~l~~~~~~--~~~l~vsPsCsL 321 (755)
T 2nq5_A 272 KTGAFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQ--SAALTIQPSCSL 321 (755)
T ss_dssp HTTTTTTSEEEEEEECTTSCBCCCHHHHHHHHHHHHHT--SSEEEEEESSCG
T ss_pred HHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHhh--cCCEEEcCCCCc
Confidence 66565 67889999999765 69999999999999986 446999999996
No 15
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=99.09 E-value=3.7e-10 Score=120.16 Aligned_cols=200 Identities=15% Similarity=0.121 Sum_probs=129.9
Q ss_pred HHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 015201 174 DSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQ 253 (411)
Q Consensus 174 eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~ 253 (411)
+..+.+++..+ .|+-+++.||.+++.+... +. +.+ -.++++-++..+.+.++.+.++|++.|+
T Consensus 572 ~~~~~~qs~t~--~pvK~~L~gP~ti~~~s~~----r~--------~~~---~ee~~~dlA~A~r~Ei~~L~~AG~r~IQ 634 (789)
T 3ppg_A 572 KESVYAQSITS--KPMKGMLTGPVTILRWSFP----RD--------DVS---GKIQALQLGLALRDEVNDLEGAGITVIQ 634 (789)
T ss_dssp HHHHHHHHTCS--SCBEEEEECHHHHHHTSBC----CS--------SSC---HHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhhcc--CCCceeccchHhHhhhhcc----cc--------CCC---HHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 44455555443 2678888999998865432 10 111 2577888889999999999999999999
Q ss_pred EecCCCC--C-----CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcccHhHHhcCCCcEEEcCC--CCCHHH
Q 015201 254 IFDSWGG--Q-----LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGGFLERMKGTGVDVIGLDW--TVDMAD 323 (411)
Q Consensus 254 i~D~~~~--~-----iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~~l~~~~e~g~d~l~~d~--~~di~~ 323 (411)
+-|+.-. + .+++.|.++....+++.++.+.. +..+.+|+| |+... +.+.++++|+++++. ..+.+.
T Consensus 635 iDEPal~e~l~~r~g~d~~~~l~~av~a~n~a~~g~p~---d~~I~tHiC~Gnf~~-~~I~~l~aD~islE~~~Rs~~e~ 710 (789)
T 3ppg_A 635 VDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVEN---STQIHSHFCYSDLDP-NHIKALDADVVSIEFSKKDDPNY 710 (789)
T ss_dssp EECTTTGGGSCSSSSHHHHHHHHHHHHHHHHHHSSSCT---TSEEEEECC---CCH-HHHHHHCCSEEEEC---------
T ss_pred EcccchhhcccccccCCHHHHHHHHHHHHHHHHhcCCC---CcEEEEeccCCCCCh-hHHHhCCCCEEEEecCCCcchHH
Confidence 9987432 1 23445555555555555544432 345788999 87655 888899999999983 122222
Q ss_pred HHHHh-CCCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCc---HHHHHHHHHHHHhcC
Q 015201 324 GRKRL-GNDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTP---EEAVAHFFEVGKSMK 394 (411)
Q Consensus 324 ~~~~~-g~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp---~Eni~a~~~a~~~yg 394 (411)
++..- .++.+..|.||.... ..++|+|.+.+++.++..+....+++|+||+..-.+ .+++++|+++++...
T Consensus 711 L~~~~~~~k~V~lGVvds~sp~vEs~EeV~~rI~~a~~~v~~erL~lsPdCGl~t~~~~~a~akL~~mveaAk~lR 786 (789)
T 3ppg_A 711 IQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEFR 786 (789)
T ss_dssp CGGGGGCCSEEEEC-------CCCCHHHHHHHHHHHTTTSCGGGEEECCSCC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEeeeecCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 21111 246788899999865 589999999999999988778999999999976655 578889999988754
No 16
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=97.22 E-value=0.0023 Score=68.34 Aligned_cols=172 Identities=13% Similarity=0.128 Sum_probs=117.6
Q ss_pred EEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCC-CCCHHHH
Q 015201 189 VLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGG-QLPPHMW 267 (411)
Q Consensus 189 v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f 267 (411)
+-..+.||+|.+..--. .+ .. -.-+| ..+++.+.....+.++.+.++|++.|++-+|.-. -++++ +
T Consensus 186 ~kpVl~GPvT~L~L~k~---~~--~~----~~~~~---~~lL~~Ll~~Y~~~l~~L~~~G~~wVQiDEP~Lv~dl~~~-~ 252 (789)
T 3ppg_A 186 TRPVILGPVSYLYLGKA---DK--DS----LDLEP---ISLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEA-V 252 (789)
T ss_dssp CEEEEECHHHHHHTCEE---CG--GG----TTCCG---GGGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHH-H
T ss_pred CCceeecHHHHHHHhcc---cc--cc----ccCCH---HHHHHHHHHHHHHHHHHHHHcCCCEEEeeCCeeecCCCHH-H
Confidence 34456799998754210 00 00 01233 2356777777778888888999999999998643 35554 4
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCE-EEEecCCcc-cHhHHhcCCCcEEEcCCCC---CHHHHHHHhCC-CeeEEccCCcC
Q 015201 268 EQWSEPYIREIVSLVRTKCPETPI-VLYINGNGG-FLERMKGTGVDVIGLDWTV---DMADGRKRLGN-DISVQGNVDPA 341 (411)
Q Consensus 268 ~ef~~Py~k~i~~~i~~~~~g~~~-~~H~CG~~~-~l~~~~e~g~d~l~~d~~~---di~~~~~~~g~-~~~l~G~vd~~ 341 (411)
.+-+..-|.+|.+ . +...+ +..-+|+.. .++.+.+++++++++|..- ++..+.+.++. +....|-||-.
T Consensus 253 ~~~~~~aY~~L~~----~-~~~kill~TYFg~~~~~l~~l~~lpV~gl~lDlv~~~~~l~~v~~~~~~~k~L~aGvVdGR 327 (789)
T 3ppg_A 253 QSKFKEAYDALVG----A-DVPELILTTYFGDVRPNLKAIENLPVAGFHFDFVRVPEQLDEVASILKDGQTLSAGVVDGR 327 (789)
T ss_dssp HTHHHHHHHHHCS----T-TSCEEEEECCSSCCGGGHHHHTTCCCSEEEEETTTCGGGHHHHHHTCCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhh----C-CCCCEEEECCCCCHHHHHHHHHcCCCcEEEEEccCCcchHHHHHhhcCCCCeEEEEEecCC
Confidence 5555455554443 2 12233 335689886 7899999999999998633 57777776754 56778999987
Q ss_pred cc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC---CCCC
Q 015201 342 CL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGV---LVGT 378 (411)
Q Consensus 342 ~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i---~~~t 378 (411)
.. ..+.+++.+-++++.+..+....+++|+|++ |.+.
T Consensus 328 NiWr~dl~~~l~~l~~l~~~lg~~~l~vspScSLlHvP~~l 368 (789)
T 3ppg_A 328 NIWKTDFAKASAVVQKAIEKVGKDKVVVATSSSLLHTPVDL 368 (789)
T ss_dssp CCBCCCHHHHHHHHHHHHHHHCGGGEEEEESSCGGGSCSCG
T ss_pred ccccCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCCCccc
Confidence 54 6889999999999998876578999999996 5554
No 17
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=95.89 E-value=0.18 Score=53.56 Aligned_cols=133 Identities=14% Similarity=0.124 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcccHhH
Q 015201 227 RTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGGFLER 304 (411)
Q Consensus 227 ~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~~l~~ 304 (411)
..+++.+.....+.++.+.++|+..|++.+|.-. -+++ .+.+-+...|.++ . +.++++.+- |+...++.
T Consensus 203 ~~~l~~l~~~y~~~l~~l~~~g~~~vq~dep~l~~d~~~-~~~~~~~~~y~~l----~----~~~~~~~tyf~~~~~~~~ 273 (766)
T 1t7l_A 203 EKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEK-AHWDLILNVYREL----S----EFPLTVFTYYDSVSDYEA 273 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGGSCCBH-HHHHHHHHHHHTT----T----TSCEEEECCSSCCSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEecCCeeecCCCH-HHHHHHHHHHHHh----c----CCcEEEECCcCCHHHHHH
Confidence 3778888888888889999999999999998654 3444 4666666666666 1 345666554 55557899
Q ss_pred HhcCCCcEEEcCCCC---CHHHHHH-HhC-CCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 305 MKGTGVDVIGLDWTV---DMADGRK-RLG-NDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 305 ~~e~g~d~l~~d~~~---di~~~~~-~~g-~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+.+++++++++|..- ++..+.+ .++ +++...|-||-... ..+.++..+.++++.+ .+++|+|++
T Consensus 274 ~~~l~v~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~Gvvdgrniw~~d~~~~~~~~~~~~~------~~~~~s~sl 343 (766)
T 1t7l_A 274 CVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGA------SAISNSCPL 343 (766)
T ss_dssp HHTSSCSEEEEECSSCSHHHHHHHHHCCCTTSEEEEEEECSSCCBCCCHHHHHHHHHHHTC------SEEEESSCG
T ss_pred HHcCCCcEEEEEecCCHHHHHHHHhccCCCCceEEEEEecCcchhhcCHHHHHHHHHHhhe------EEEECCcCC
Confidence 999999999987532 3555655 354 66777788998755 5677766555543322 999999995
No 18
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=95.81 E-value=0.11 Score=49.78 Aligned_cols=151 Identities=15% Similarity=0.144 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 223 PHVLRTLLSHLTQAIADYIIYQV-ESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 223 Pe~v~~ll~~~~d~~~~~~~~~~-e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
|+.+++.++...+...++++.++ +.|||.|-+.-.+ +.-+|++.+.+. ++.+.+.. ++|+.+--||
T Consensus 68 ~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~--------V~~v~~~~-~vPlsIDg~~ 138 (323)
T 4djd_D 68 PDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVAT--------VKEVLQAV-GVPLVVVGCG 138 (323)
T ss_dssp CHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHH--------HHHHHHHC-CSCEEEECCS
T ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHH--------HHHHHhhC-CceEEEECCC
Confidence 55555555554455778888898 8999999986322 237899886664 33443333 7899999999
Q ss_pred Ccc-c---HhHHhcCCCc---EE-EcCCC--CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC-C-CC
Q 015201 298 NGG-F---LERMKGTGVD---VI-GLDWT--VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG-S-RG 365 (411)
Q Consensus 298 ~~~-~---l~~~~e~g~d---~l-~~d~~--~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~-~-~g 365 (411)
+.+ . ++.-.+.|.+ .+ ++... -.+..+.+++|-.+++|...| .+ +.++..+.+...| + ..
T Consensus 139 ~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d-------~~-~~~~l~~~a~~~GI~~e~ 210 (323)
T 4djd_D 139 DVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIARSPLD-------IN-ICKQLNILINEMNLPLDH 210 (323)
T ss_dssp CHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSC-------HH-HHHHHHHHHHTTTCCGGG
T ss_pred CCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEEccch-------HH-HHHHHHHHHHHcCCCHHH
Confidence 975 2 4555555643 33 34322 246677788998788876332 22 3333333444444 4 68
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHH
Q 015201 366 HILNLGHGVLVGTPEEAVAHFFEVGK 391 (411)
Q Consensus 366 fIls~gc~i~~~tp~Eni~a~~~a~~ 391 (411)
+|+-||.+ |.+...|.-...++..+
T Consensus 211 IIlDPg~g-~fgk~~e~~l~~l~~ir 235 (323)
T 4djd_D 211 IVIDPSIG-GLGYGIEYSFSIMERIR 235 (323)
T ss_dssp EEEECCCC-CTTTTHHHHHHHHHHHH
T ss_pred EEEeCCCc-cccCCHHHHHHHHHHHH
Confidence 99999987 33444444444444444
No 19
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.28 E-value=0.66 Score=43.82 Aligned_cols=150 Identities=17% Similarity=0.154 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~ 310 (411)
+..++.++.+++.|||.|-++-.+ +..+|++.=-+-+.|..+.+.+.+ ++|+.+.+. +...++.-.+.|.
T Consensus 63 ~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-----~vpiSIDT~-~~~V~~aAl~aGa 136 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-----KLPISIDTY-KAEVAKQAIEAGA 136 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-----CSCEEEECS-CHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-----CceEEEeCC-CHHHHHHHHHcCC
Confidence 455667788999999999888533 247888776666788877776543 578777654 2224566566699
Q ss_pred cEEE-cCC---CCCHHHHHHHhCCCeeEEccC-CcCccCCCHHHHHHHHHHHHHHhC----C-CCeEEeCCCCCCCCCcH
Q 015201 311 DVIG-LDW---TVDMADGRKRLGNDISVQGNV-DPACLFSPLPALTDEIQRVVKCAG----S-RGHILNLGHGVLVGTPE 380 (411)
Q Consensus 311 d~l~-~d~---~~di~~~~~~~g~~~~l~G~v-d~~~L~gt~eeV~~ev~~~i~~~~----~-~gfIls~gc~i~~~tp~ 380 (411)
++++ +.. ...+.++.+++|-.+++|-.- .|.+ ....+++.+..++.++.+. + ...|+-||.+. ..+..
T Consensus 137 ~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y-~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gf-gk~~~ 214 (297)
T 1tx2_A 137 HIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNY-RNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGF-AKTPE 214 (297)
T ss_dssp CEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCC-SSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHH
T ss_pred CEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCc-chHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCc-CCCHH
Confidence 9995 322 234666677788777776531 1221 1235667777777766543 2 47999999887 34445
Q ss_pred HHHHHHHHHHHhc
Q 015201 381 EAVAHFFEVGKSM 393 (411)
Q Consensus 381 Eni~a~~~a~~~y 393 (411)
.|+ .+++..+++
T Consensus 215 ~n~-~ll~~l~~l 226 (297)
T 1tx2_A 215 QNL-EAMRNLEQL 226 (297)
T ss_dssp HHH-HHHHTGGGG
T ss_pred HHH-HHHHHHHHH
Confidence 555 444444443
No 20
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.51 E-value=3.1 Score=38.86 Aligned_cols=151 Identities=11% Similarity=0.121 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~ 310 (411)
+..++.++.+++.|||.|-++-.. +..+|++.=.+-+.|..+.+.+.. ++|+.+++-. ..-++.-.+.|+
T Consensus 38 ~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-----~~piSIDT~~-~~va~aAl~aGa 111 (282)
T 1aj0_A 38 IDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-----EVWISVDTSK-PEVIRESAKVGA 111 (282)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-----CCEEEEECCC-HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-----CCeEEEeCCC-HHHHHHHHHcCC
Confidence 455667788999999999888632 237888776666778777776543 5676665422 224566666799
Q ss_pred cEEE-cC--CCCCHHHHHHHhCCCeeEEccC-CcCcc-----CCC-HHHHHHHHHHHHHHh---C-C-CCeEEeCCCCCC
Q 015201 311 DVIG-LD--WTVDMADGRKRLGNDISVQGNV-DPACL-----FSP-LPALTDEIQRVVKCA---G-S-RGHILNLGHGVL 375 (411)
Q Consensus 311 d~l~-~d--~~~di~~~~~~~g~~~~l~G~v-d~~~L-----~gt-~eeV~~ev~~~i~~~---~-~-~gfIls~gc~i~ 375 (411)
++++ +. ....+..+.+++|-.+++|-.- .|... +.+ .+|+.+..++.++.+ | + ..+|+-||.+.
T Consensus 112 ~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf- 190 (282)
T 1aj0_A 112 HIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF- 190 (282)
T ss_dssp CEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-
T ss_pred CEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-
Confidence 9995 33 2346777778888878886431 12221 112 255666666666554 2 2 47999999887
Q ss_pred CCCcHHHHHHHHHHHHhc
Q 015201 376 VGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 376 ~~tp~Eni~a~~~a~~~y 393 (411)
..+..+|+. +++..+++
T Consensus 191 ~k~~~~n~~-ll~~l~~~ 207 (282)
T 1aj0_A 191 GKNLSHNYS-LLARLAEF 207 (282)
T ss_dssp SCCHHHHHH-HHHTGGGG
T ss_pred ccCHHHHHH-HHHHHHHH
Confidence 334455544 44444443
No 21
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.16 E-value=1.1 Score=41.69 Aligned_cols=147 Identities=16% Similarity=0.063 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcC--CCcE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGT--GVDV 312 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~--g~d~ 312 (411)
+..++.++.+++.|||.|-+.-.+ +++.=.+-+.|..+.+.+.. ++|+.+-++ +...++.-.+. |.++
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s----~~~eE~~rv~~vi~~l~~~~-----~~pisIDT~-~~~v~~aal~a~~Ga~i 103 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGP----TADDPVRVMEWLVKTIQEVV-----DLPCCLDST-NPDAIEAGLKVHRGHAM 103 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS----CSSCHHHHHHHHHHHHHHHC-----CCCEEEECS-CHHHHHHHHHHCCSCCE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCc----CchhHHHHHHHHHHHHHHhC-----CCeEEEeCC-CHHHHHHHHHhCCCCCE
Confidence 456677788999999999876544 22222345556666555432 577665443 22245665665 9999
Q ss_pred EE-cCCCCC----HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC----C-CCeEEeCCCCCCCCCcHHH
Q 015201 313 IG-LDWTVD----MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG----S-RGHILNLGHGVLVGTPEEA 382 (411)
Q Consensus 313 l~-~d~~~d----i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~----~-~gfIls~gc~i~~~tp~En 382 (411)
++ +....| +..+.+++|-.+++|- .|..-.-.|.+++.+..++.++.+. + ..+|+-||.+....+...|
T Consensus 104 INdvs~~~d~~~~~~~~~a~~~~~vv~m~-~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~ 182 (271)
T 2yci_X 104 INSTSADQWKMDIFFPMAKKYEAAIIGLT-MNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHA 182 (271)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCEEEEES-CBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHH
T ss_pred EEECCCCccccHHHHHHHHHcCCCEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHH
Confidence 96 543323 5556677887677664 2322222467888888888777653 2 4699999988643344444
Q ss_pred HHHHHHHHHhc
Q 015201 383 VAHFFEVGKSM 393 (411)
Q Consensus 383 i~a~~~a~~~y 393 (411)
+. +++..+++
T Consensus 183 ~~-~l~~l~~~ 192 (271)
T 2yci_X 183 VE-VLETIRQI 192 (271)
T ss_dssp HH-HHHHHHHH
T ss_pred HH-HHHHHHHH
Confidence 33 44444444
No 22
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=93.70 E-value=3 Score=39.63 Aligned_cols=145 Identities=14% Similarity=0.121 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG---GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~---~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~ 310 (411)
+..++.++.+++.|||.|-++-.+. ..+|++.=.+-+.|..+.+.+.+ +++|+. ++-... .++.-.+.|+
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~----~~vpIS--IDT~~~~VaeaAl~aGa 138 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAY----PDQLIS--VDTWRAQVAKAACAAGA 138 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHS----TTCEEE--EECSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhC----CCCeEE--EeCCCHHHHHHHHHhCC
Confidence 4456677889999999998874221 46887776677888877776543 255543 333333 4666667799
Q ss_pred cEEE-cC--CCCCHHHHHHHhCCCeeEEcc--CCcCccCCC------HHHHHHH----HHHHHHHh---C-C-CCeEEeC
Q 015201 311 DVIG-LD--WTVDMADGRKRLGNDISVQGN--VDPACLFSP------LPALTDE----IQRVVKCA---G-S-RGHILNL 370 (411)
Q Consensus 311 d~l~-~d--~~~di~~~~~~~g~~~~l~G~--vd~~~L~gt------~eeV~~e----v~~~i~~~---~-~-~gfIls~ 370 (411)
+++| +. ....+.++.+++|-.+++|-. ..|..+... +++|.++ .++.++.+ | + ..+|+-|
T Consensus 139 ~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDP 218 (318)
T 2vp8_A 139 DLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDP 218 (318)
T ss_dssp CEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEET
T ss_pred CEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 9995 32 233677777888877888652 313332211 1344433 34444433 2 2 4799999
Q ss_pred CCCCCCCCcHHHHHHH
Q 015201 371 GHGVLVGTPEEAVAHF 386 (411)
Q Consensus 371 gc~i~~~tp~Eni~a~ 386 (411)
|.+... +..+|+..+
T Consensus 219 G~GF~K-t~~~nl~ll 233 (318)
T 2vp8_A 219 AHDFGK-NTFHGLLLL 233 (318)
T ss_dssp TTTCCT-TSHHHHHHH
T ss_pred CCCccc-CHHHHHHHH
Confidence 998754 556666554
No 23
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=93.67 E-value=2.5 Score=38.89 Aligned_cols=139 Identities=11% Similarity=0.082 Sum_probs=88.0
Q ss_pred HHHHHHHhCCCEE--EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe--------cCCc-ccH----hH
Q 015201 240 YIIYQVESGAHCI--QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI--------NGNG-GFL----ER 304 (411)
Q Consensus 240 ~~~~~~e~G~d~i--~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~--------CG~~-~~l----~~ 304 (411)
.++..+++|++.| .+.+... +. +-.....+++.+.+++. |.++++.. +|.. ..+ ..
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~~---~~----~~~~~~~~~v~~~~~~~--g~~viv~~~~~G~~l~~~~~~~~~~~~a~~ 174 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGSD---ED----WEAYRDLGMIAETCEYW--GMPLIAMMYPRGKHIQNERDPELVAHAARL 174 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETST---TH----HHHHHHHHHHHHHHHHH--TCCEEEEEEECSTTCSCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEecCCC---CH----HHHHHHHHHHHHHHHHc--CCCEEEEeCCCCcccCCCCCHhHHHHHHHH
Confidence 3456678999998 4433321 22 22335678888888877 67877654 1111 122 44
Q ss_pred HhcCCCcEEEcCCCCCHHHHH---HHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHH
Q 015201 305 MKGTGVDVIGLDWTVDMADGR---KRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEE 381 (411)
Q Consensus 305 ~~e~g~d~l~~d~~~di~~~~---~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~E 381 (411)
..+.|+|.+.+.+..|+..++ +..+-.+...||+.+ .+.|++.+.++++++.+. .|+.++++- +...-|.+
T Consensus 175 a~~~Gad~i~~~~~~~~~~l~~i~~~~~ipvva~GGi~~----~~~~~~~~~~~~~~~~Ga-~gv~vg~~i-~~~~~~~~ 248 (273)
T 2qjg_A 175 GAELGADIVKTSYTGDIDSFRDVVKGCPAPVVVAGGPKT----NTDEEFLQMIKDAMEAGA-AGVAVGRNI-FQHDDVVG 248 (273)
T ss_dssp HHHTTCSEEEECCCSSHHHHHHHHHHCSSCEEEECCSCC----SSHHHHHHHHHHHHHHTC-SEEECCHHH-HTSSSHHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHHHcCC-cEEEeeHHh-hCCCCHHH
Confidence 557899998777656665544 444556777898886 368888888888887544 355554431 12234677
Q ss_pred HHHHHHHHHHhc
Q 015201 382 AVAHFFEVGKSM 393 (411)
Q Consensus 382 ni~a~~~a~~~y 393 (411)
.++++.+.+++.
T Consensus 249 ~~~~l~~~~~~~ 260 (273)
T 2qjg_A 249 ITRAVCKIVHEN 260 (273)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHhcC
Confidence 888888887763
No 24
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.54 E-value=0.28 Score=46.51 Aligned_cols=146 Identities=13% Similarity=0.057 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEE
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVI 313 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l 313 (411)
++..+++++++.++|++.|-++- +.+|+....+. -..+++..+.+. ++.++..|. .+...++...+.|++.+
T Consensus 29 ~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~~~~~--d~~~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~aG~~~v 100 (302)
T 2ftp_A 29 VADKIRLVDDLSAAGLDYIEVGS----FVSPKWVPQMA--GSAEVFAGIRQR-PGVTYAALA-PNLKGFEAALESGVKEV 100 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEE----CSCTTTCGGGT--THHHHHHHSCCC-TTSEEEEEC-CSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHcCcCEEEECC----CcCcccccccc--CHHHHHHHhhhc-CCCEEEEEe-CCHHHHHHHHhCCcCEE
Confidence 45566788888999999986642 23332111110 011233444433 367788887 34346888889999998
Q ss_pred Ec-CCCCCH--------------------HHHHHHhCCCeeEEccCCcC----c-cCCCHHHHHHHHHHHHHHhCCCCeE
Q 015201 314 GL-DWTVDM--------------------ADGRKRLGNDISVQGNVDPA----C-LFSPLPALTDEIQRVVKCAGSRGHI 367 (411)
Q Consensus 314 ~~-d~~~di--------------------~~~~~~~g~~~~l~G~vd~~----~-L~gt~eeV~~ev~~~i~~~~~~gfI 367 (411)
.+ +...|. .+..+..|. .+.|++-.. . -.-++|++.+.++++.+.+ ...+.
T Consensus 101 ~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~--~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G-~d~i~ 177 (302)
T 2ftp_A 101 AVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQV--RVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG-CYEVS 177 (302)
T ss_dssp EEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT-CSEEE
T ss_pred EEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC-CCEEE
Confidence 75 332221 122233453 344433221 1 1357888888887777653 34566
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 368 LNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 368 ls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
++..+++ ..|+.+..+++.+++.
T Consensus 178 l~DT~G~---~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 178 LGDTIGV---GTAGATRRLIEAVASE 200 (302)
T ss_dssp EEESSSC---CCHHHHHHHHHHHTTT
T ss_pred EeCCCCC---cCHHHHHHHHHHHHHh
Confidence 6655555 3466677777777653
No 25
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=92.71 E-value=6.2 Score=36.52 Aligned_cols=152 Identities=14% Similarity=0.101 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecC----CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDS----WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~----~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g 309 (411)
+..++.++.+++.|||.|-++.- -+..+|++.=.+-+.|.++.+. +. +++ +-++-... ..+.-.+.|
T Consensus 30 ~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~----~~--~v~--iSIDT~~~~Va~~al~aG 101 (270)
T 4hb7_A 30 ETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIV----GF--DVK--ISVDTFRSEVAEACLKLG 101 (270)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHT----TS--SSE--EEEECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhh----cC--CCe--EEEECCCHHHHHHHHHhc
Confidence 44566778889999999988752 2347998876666778777663 22 554 33444443 357777899
Q ss_pred CcEEE-cC---CCCCHHHHHHHhCCCeeEEccC-CcCccCCCHHHHHHHHHHHHHHh---C-C-CCeEEeCCCCCCCCCc
Q 015201 310 VDVIG-LD---WTVDMADGRKRLGNDISVQGNV-DPACLFSPLPALTDEIQRVVKCA---G-S-RGHILNLGHGVLVGTP 379 (411)
Q Consensus 310 ~d~l~-~d---~~~di~~~~~~~g~~~~l~G~v-d~~~L~gt~eeV~~ev~~~i~~~---~-~-~gfIls~gc~i~~~tp 379 (411)
++++| +. ...++.++...++-.+++|=.- +|.. ..-.+||.++..+.++.+ | + ...|+-||-++. .+.
T Consensus 102 a~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~-~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFg-Kt~ 179 (270)
T 4hb7_A 102 VDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRD-EPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFA-KTR 179 (270)
T ss_dssp CCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCS-SCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS-CCH
T ss_pred cceeccccccccchhHHHHHHHcCCCeEEeccccCCcc-ccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcc-ccc
Confidence 99997 42 2235777778888778887321 1221 122456666665555443 2 3 579999998875 567
Q ss_pred HHHHHHH--HHHHHhcCCC
Q 015201 380 EEAVAHF--FEVGKSMKYD 396 (411)
Q Consensus 380 ~Eni~a~--~~a~~~yg~~ 396 (411)
.+|+.-+ ++..+.+|.+
T Consensus 180 ~~N~~ll~~l~~~~~lg~P 198 (270)
T 4hb7_A 180 NEEAEVMARLDELVATEYP 198 (270)
T ss_dssp HHHHHHHTCHHHHHTTCSC
T ss_pred ccHHHHHhhHHHHhcCCCC
Confidence 7888766 3455666643
No 26
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=92.48 E-value=6.8 Score=36.46 Aligned_cols=153 Identities=10% Similarity=0.051 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~ 310 (411)
+..++.++.+++.|||.|-++-.+ +..+|++.=-+-+.|..+.+.+ . ++|+.+++- +...++.-.+.|+
T Consensus 29 ~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~----~--~~piSIDT~-~~~va~aAl~aGa 101 (280)
T 1eye_A 29 DDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAA----Q--GITVSIDTM-RADVARAALQNGA 101 (280)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHH----T--TCCEEEECS-CHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhc----C--CCEEEEeCC-CHHHHHHHHHcCC
Confidence 445567788999999999887532 1256666555556677766654 2 467766542 1124566667799
Q ss_pred cEEE-cCC---CCCHHHHHHHhCCCeeEEccC-CcCccC------CC-HHHHHHHHHHHHHHh---C-C-CCeEEeCCCC
Q 015201 311 DVIG-LDW---TVDMADGRKRLGNDISVQGNV-DPACLF------SP-LPALTDEIQRVVKCA---G-S-RGHILNLGHG 373 (411)
Q Consensus 311 d~l~-~d~---~~di~~~~~~~g~~~~l~G~v-d~~~L~------gt-~eeV~~ev~~~i~~~---~-~-~gfIls~gc~ 373 (411)
++++ +.. ...+..+.+++|-.+++|-.- .|.... .+ .++|.++.++.++.+ | + ..+|+-||-+
T Consensus 102 ~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~G 181 (280)
T 1eye_A 102 QMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLG 181 (280)
T ss_dssp CEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred CEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCC
Confidence 9995 321 335777778888888886431 122221 11 344555555555543 2 2 4799999988
Q ss_pred CCCCCcHHHHHHHH--HHHHhcCC
Q 015201 374 VLVGTPEEAVAHFF--EVGKSMKY 395 (411)
Q Consensus 374 i~~~tp~Eni~a~~--~a~~~yg~ 395 (411)
+.. +..+|+..+. +..++.|.
T Consensus 182 f~k-~~~~n~~ll~~l~~~~~~g~ 204 (280)
T 1eye_A 182 FAK-TAQHNWAILHALPELVATGI 204 (280)
T ss_dssp SSC-CHHHHHHHHHTHHHHHTTSS
T ss_pred ccc-CHHHHHHHHHHHHHhhcCCC
Confidence 653 5556665543 33444443
No 27
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=92.40 E-value=1 Score=42.49 Aligned_cols=138 Identities=11% Similarity=0.039 Sum_probs=89.9
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC------CcccH----hHHhcCCC
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING------NGGFL----ERMKGTGV 310 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG------~~~~l----~~~~e~g~ 310 (411)
++..++.|||.|.+.-.+++ + . +.....-..++.+.++++ |.|+++-.+- +...+ ..-.++|+
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs---~-~-~~~~l~~i~~v~~~a~~~--GlpvIie~~~G~~~~~d~e~i~~aariA~elGA 203 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGS---E-Y-EHQSIKNIIQLVDAGMKV--GMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGA 203 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTS---T-T-HHHHHHHHHHHHHHHHTT--TCCEEEEECC----CCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEEEECCC---C-c-HHHHHHHHHHHHHHHHHc--CCEEEEECCCCCccCCCHHHHHHHHHHHHHhCC
Confidence 44556899999987666552 2 2 233555678899999987 6888875532 11112 22337899
Q ss_pred cEEEcCCC-CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHH
Q 015201 311 DVIGLDWT-VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEV 389 (411)
Q Consensus 311 d~l~~d~~-~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a 389 (411)
|.+-..+. -++.++.+..+-.+.+.||+.. +.++..+.+++.++.+ ..|.+++..= +..+-|.+-++++.+.
T Consensus 204 D~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~-----~~~~~l~~v~~ai~aG-A~Gv~vGRnI-~q~~dp~~~~~al~~i 276 (295)
T 3glc_A 204 QIIKTYYVEKGFERIVAGCPVPIVIAGGKKL-----PEREALEMCWQAIDQG-ASGVDMGRNI-FQSDHPVAMMKAVQAV 276 (295)
T ss_dssp SEEEEECCTTTHHHHHHTCSSCEEEECCSCC-----CHHHHHHHHHHHHHTT-CSEEEESHHH-HTSSSHHHHHHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHhCCCcEEEEECCCC-----CHHHHHHHHHHHHHhC-CeEEEeHHHH-hcCcCHHHHHHHHHHH
Confidence 99865443 3677777765545677787664 5788999999999863 3466665431 2334566677777777
Q ss_pred HHh
Q 015201 390 GKS 392 (411)
Q Consensus 390 ~~~ 392 (411)
+++
T Consensus 277 vh~ 279 (295)
T 3glc_A 277 VHH 279 (295)
T ss_dssp HHH
T ss_pred HhC
Confidence 765
No 28
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=92.27 E-value=1.3 Score=41.03 Aligned_cols=139 Identities=12% Similarity=0.026 Sum_probs=91.0
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC----------cccH----hHH
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN----------GGFL----ERM 305 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~----------~~~l----~~~ 305 (411)
.++..++.|++.|.+...+++ ..+ +....-.+++.+.++++ ++|+++. |.- ...+ ...
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig~----~~~-~~~~~~~~~v~~~~~~~--~~~vIi~-~~~~G~~~~~~~s~~~i~~a~~~a 168 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPGS----GFE-WKMFEELARIKRDAVKF--DLPLVVE-SFPRGGKVVNETAPEIVAYAARIA 168 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTTS----TTH-HHHHHHHHHHHHHHHHH--TCCEEEE-ECCCSTTCCCTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEEEecCC----cCH-HHHHHHHHHHHHHHHHc--CCeEEEE-eeCCCCccccCCCHHHHHHHHHHH
Confidence 345667889999998776663 222 44667788888888887 6887765 422 1222 234
Q ss_pred hcCCCcEEEcCCCC---CHHHHHHHhCC-CeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHH
Q 015201 306 KGTGVDVIGLDWTV---DMADGRKRLGN-DISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEE 381 (411)
Q Consensus 306 ~e~g~d~l~~d~~~---di~~~~~~~g~-~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~E 381 (411)
.+.|+|.+-..+.. ++.++++..+. .+...||+.. +|.++..+.++..++.+.. |...+.. -+...-|.+
T Consensus 169 ~~~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~asGGi~~----~~~~~~l~~i~~~~~aGA~-Gvsvgra-I~~~~dp~~ 242 (263)
T 1w8s_A 169 LELGADAMKIKYTGDPKTFSWAVKVAGKVPVLMSGGPKT----KTEEDFLKQVEGVLEAGAL-GIAVGRN-VWQRRDALK 242 (263)
T ss_dssp HHHTCSEEEEECCSSHHHHHHHHHHTTTSCEEEECCSCC----SSHHHHHHHHHHHHHTTCC-EEEESHH-HHTSTTHHH
T ss_pred HHcCCCEEEEcCCCCHHHHHHHHHhCCCCeEEEEeCCCC----CCHHHHHHHHHHHHHcCCe-EEEEehh-hcCCcCHHH
Confidence 56899998655432 35566666666 6888999864 5799999999999986544 5544433 123334666
Q ss_pred HHHHHHHHHHh
Q 015201 382 AVAHFFEVGKS 392 (411)
Q Consensus 382 ni~a~~~a~~~ 392 (411)
.++++.+.+++
T Consensus 243 ~~~~l~~~v~~ 253 (263)
T 1w8s_A 243 FARALAELVYG 253 (263)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 77777776654
No 29
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.79 E-value=0.35 Score=46.00 Aligned_cols=146 Identities=10% Similarity=0.059 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEE
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVI 313 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l 313 (411)
++..+++++++.++|++.|-++- +.||+....+.-+ .+++..+.+. ++..+..+. -+...++...+.|++.+
T Consensus 27 ~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~p~~~d~--~~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~~g~~~v 98 (307)
T 1ydo_A 27 TEDKITWINQLSRTGLSYIEITS----FVHPKWIPALRDA--IDVAKGIDRE-KGVTYAALV-PNQRGLENALEGGINEA 98 (307)
T ss_dssp HHHHHHHHHHHHTTTCSEEEEEE----CSCTTTCGGGTTH--HHHHHHSCCC-TTCEEEEEC-CSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECC----CcCcccccccCCH--HHHHHHhhhc-CCCeEEEEe-CCHHhHHHHHhCCcCEE
Confidence 45567788889999999986642 3333211111000 1234444433 355555444 33335788888999998
Q ss_pred EcC-CC----------CCHH----------HHHHHhCCCeeEEccCCcCc-----cCCCHHHHHHHHHHHHHHhCCCCeE
Q 015201 314 GLD-WT----------VDMA----------DGRKRLGNDISVQGNVDPAC-----LFSPLPALTDEIQRVVKCAGSRGHI 367 (411)
Q Consensus 314 ~~d-~~----------~di~----------~~~~~~g~~~~l~G~vd~~~-----L~gt~eeV~~ev~~~i~~~~~~gfI 367 (411)
.+- .. .+.+ +..+..|. .+.|++.... -.-+++.+.+.++++.+.+ ...+.
T Consensus 99 ~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G-a~~i~ 175 (307)
T 1ydo_A 99 CVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANL--TTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG-ISELS 175 (307)
T ss_dssp EEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT-CSCEE
T ss_pred EEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--EEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC-CCEEE
Confidence 642 11 1211 12233453 3444433321 1257888888888877764 33555
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 368 LNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 368 ls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
|.- ++. -..|+.+..+++++++.
T Consensus 176 l~D--T~G-~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 176 LGD--TIG-AANPAQVETVLEALLAR 198 (307)
T ss_dssp EEC--SSC-CCCHHHHHHHHHHHHTT
T ss_pred EcC--CCC-CcCHHHHHHHHHHHHHh
Confidence 543 332 24577788888888764
No 30
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=91.52 E-value=2.2 Score=40.06 Aligned_cols=141 Identities=13% Similarity=0.082 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc----HhHHhcCC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF----LERMKGTG 309 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~----l~~~~e~g 309 (411)
++..+++++.+.++|++.|-++-+ ..+|+.|+. .+++.+.. ++..+..+.-+.... ++.+.+.|
T Consensus 26 ~~~K~~i~~~L~~~Gv~~IE~g~p---~~~~~d~e~-----v~~i~~~~----~~~~i~~l~~~~~~di~~a~~~~~~ag 93 (293)
T 3ewb_X 26 VKEKIQIALQLEKLGIDVIEAGFP---ISSPGDFEC-----VKAIAKAI----KHCSVTGLARCVEGDIDRAEEALKDAV 93 (293)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECG---GGCHHHHHH-----HHHHHHHC----CSSEEEEEEESSHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC---CCCccHHHH-----HHHHHHhc----CCCEEEEEecCCHHHHHHHHHHHhhcC
Confidence 455667888899999999866432 247776654 33444333 255555555443222 34455578
Q ss_pred CcEEEcC-C----------CCCHHHH----------HHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEE
Q 015201 310 VDVIGLD-W----------TVDMADG----------RKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHIL 368 (411)
Q Consensus 310 ~d~l~~d-~----------~~di~~~----------~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIl 368 (411)
++.+++- . ..+.++. .+..|.++.+ +--|. -.-+++.+.+.++++.+.+ -..+
T Consensus 94 ~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~-~~~d~--~~~~~~~~~~~~~~~~~~G---~~~i 167 (293)
T 3ewb_X 94 SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQF-SPEDA--TRSDRAFLIEAVQTAIDAG---ATVI 167 (293)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEE-EEETG--GGSCHHHHHHHHHHHHHTT---CCEE
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEE-EeccC--CCCCHHHHHHHHHHHHHcC---CCEE
Confidence 8887531 1 2233222 2223443332 11111 1357888888877776653 2345
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 369 NLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+...++.. ..|+.+..+++++++.
T Consensus 168 ~l~DT~G~-~~P~~v~~lv~~l~~~ 191 (293)
T 3ewb_X 168 NIPDTVGY-TNPTEFGQLFQDLRRE 191 (293)
T ss_dssp EEECSSSC-CCHHHHHHHHHHHHHH
T ss_pred EecCCCCC-CCHHHHHHHHHHHHHh
Confidence 54444443 4466688888877764
No 31
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=91.36 E-value=7.6 Score=36.21 Aligned_cols=122 Identities=18% Similarity=0.190 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 56 ~~v~~~~~~~~~gr~pviaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gadav 99 (292)
T 2vc6_A 56 EQVVEITIKTANGRVPVIAGAGSN-----------S-------------------------TAEAIAFVRHAQNAGADGV 99 (292)
T ss_dssp HHHHHHHHHHHTTSSCBEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCc-----------c-------------------------HHHHHHHHHHHHHcCCCEE
Confidence 344555666677788988766441 0 1233567777888999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhc-CCCcEEEc-CCCCC---
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKG-TGVDVIGL-DWTVD--- 320 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e-~g~d~l~~-d~~~d--- 320 (411)
.+.-++-.-.|+ +-+.-|++.+.+.. ++|++++.. |.. . .+..+.+ .+ ++..+ +...|
T Consensus 100 lv~~P~y~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nIvgiK~s~gd~~~ 169 (292)
T 2vc6_A 100 LIVSPYYNKPTQ----EGIYQHFKAIDAAS-----TIPIIVYNIPGRSAIEIHVETLARIFEDCP-NVKGVXDATGNLLR 169 (292)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECSCCTHH
T ss_pred EEcCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCccccCcCCCHHHHHHHHhhCC-CEEEEecCCCCHHH
Confidence 887775443455 44566778887765 578888774 432 2 2444554 53 55555 33335
Q ss_pred HHHHHHHhCCCeeEEccCCc
Q 015201 321 MADGRKRLGNDISVQGNVDP 340 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~ 340 (411)
+.++++..+++..++.|-|.
T Consensus 170 ~~~~~~~~~~~f~v~~G~d~ 189 (292)
T 2vc6_A 170 PSLERMACGEDFNLLTGEDG 189 (292)
T ss_dssp HHHHHHHSCTTSEEEESCGG
T ss_pred HHHHHHHcCCCEEEEECchH
Confidence 44555556656666555554
No 32
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=91.30 E-value=2.3 Score=41.75 Aligned_cols=166 Identities=13% Similarity=0.130 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCC--CEEEEec-CCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc----
Q 015201 228 TLLSHLTQAIADYIIYQVESGA--HCIQIFD-SWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---- 300 (411)
Q Consensus 228 ~ll~~~~d~~~~~~~~~~e~G~--d~i~i~D-~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---- 300 (411)
++.+.+.++..+.++.+.+.|+ +.+++.. ...++.+...|++ ..-+++..++.+|+..|+.++++|.|....
T Consensus 134 ~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~-la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~~~~ 212 (399)
T 1ur4_A 134 DKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAK-MSQLFNAGSQAVRETDSNILVALHFTNPETSGRY 212 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHH-HHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHH-HHHHHHHHHHHHHHhCCCCeEEEEeCCCcchHHH
Confidence 4444555666666677777775 5565654 3334554444443 346778888899998888889999985432
Q ss_pred --cHhHHhcCC--CcEEEcCCCC----C-------HHHHHHHhCCCeeEE--ccCCcC---------------cc--CCC
Q 015201 301 --FLERMKGTG--VDVIGLDWTV----D-------MADGRKRLGNDISVQ--GNVDPA---------------CL--FSP 346 (411)
Q Consensus 301 --~l~~~~e~g--~d~l~~d~~~----d-------i~~~~~~~g~~~~l~--G~vd~~---------------~L--~gt 346 (411)
+++.+...| +|+|++.... . +..+.++||+.+.|. |--... .. --|
T Consensus 213 ~~~~d~l~~~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s 292 (399)
T 1ur4_A 213 AWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVT 292 (399)
T ss_dssp HHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSS
T ss_pred HHHHHHHHHcCCCcCeEeEecCccchhhHHHHHHHHHHHHHHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCC
Confidence 246556544 7788654221 2 566777888776663 322110 00 136
Q ss_pred HHHHHHHHHHHHHHhCC-----CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 347 LPALTDEIQRVVKCAGS-----RGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 347 ~eeV~~ev~~~i~~~~~-----~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
++.=.+..+++++.+.. .|+..=--+-+|.+ +.+|...=.+++.++|.
T Consensus 293 ~~gQa~~l~~l~~~v~~~~~~g~GvfyWep~w~~~~-~~~~~~~n~~~~~~~g~ 345 (399)
T 1ur4_A 293 VQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVG-PAHRLEKNKALWETYGS 345 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSS-CGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHhccCceEEEEEEccceeccc-ccccccccccccccCCC
Confidence 77777777777765432 24433322334533 34777777777777774
No 33
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=90.80 E-value=5.8 Score=42.00 Aligned_cols=87 Identities=22% Similarity=0.240 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-hH--HhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-ER--MKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~~--~~e~g~ 310 (411)
++.++.++.+.++|++.|.+.|..|. +.|..+.++ ++.+++..|++++-+|.+-+... + .. -.+.|+
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G~-~~P~~v~~l--------V~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa 331 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAGL-LKPTACTML--------VSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGA 331 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTSC-CCHHHHHHH--------HHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCCC-cCHHHHHHH--------HHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCC
Confidence 45556677788899999988887665 778776653 45555554467899999877652 3 33 336899
Q ss_pred cEEEc-----C---CCCCHHHHHHHhCC
Q 015201 311 DVIGL-----D---WTVDMADGRKRLGN 330 (411)
Q Consensus 311 d~l~~-----d---~~~di~~~~~~~g~ 330 (411)
+.+.. . ...++.++...+..
T Consensus 332 ~~VD~ti~GlGertGN~~lE~vv~~L~~ 359 (718)
T 3bg3_A 332 DVVDVAADSMSGMTSQPSMGALVACTRG 359 (718)
T ss_dssp SEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CEEEecCcccccccCchhHHHHHHHHHh
Confidence 99853 2 23577777766653
No 34
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=90.79 E-value=0.63 Score=45.47 Aligned_cols=144 Identities=9% Similarity=0.070 Sum_probs=86.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCC-CCCCH----------------HHHH--HHHHHHHHHHHHHHHhhCCCCCEEEEecC-
Q 015201 238 ADYIIYQVESGAHCIQIFDSWG-GQLPP----------------HMWE--QWSEPYIREIVSLVRTKCPETPIVLYING- 297 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~-~~iSp----------------~~f~--ef~~Py~k~i~~~i~~~~~g~~~~~H~CG- 297 (411)
.+.+++..++|||.+-+.--.. +++|| ++|+ ++-+..++.|.++.++. |++ +.+--
T Consensus 47 ~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~--Gi~--~~stpf 122 (385)
T 1vli_A 47 FALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK--QVI--FLSTVC 122 (385)
T ss_dssp HHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT--TCE--EECBCC
T ss_pred HHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc--CCc--EEEccC
Confidence 3445566789999986542111 23333 3333 46778899999999998 554 22222
Q ss_pred CcccHhHHhcCCCcEEEcC--CCCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCC
Q 015201 298 NGGFLERMKGTGVDVIGLD--WTVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHG 373 (411)
Q Consensus 298 ~~~~l~~~~e~g~d~l~~d--~~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~ 373 (411)
+...++.+.++|++++-+. +.+|+.-+++. .|+.+.+.-|+ .|.+|+...+.-+... |...+||.= |.
T Consensus 123 D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGm------aTl~Ei~~Ave~i~~~-Gn~~iiLlh-c~ 194 (385)
T 1vli_A 123 DEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAG------AEISDVHEAWRTIRAE-GNNQIAIMH-CV 194 (385)
T ss_dssp SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT------CCHHHHHHHHHHHHTT-TCCCEEEEE-EC
T ss_pred CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC------CCHHHHHHHHHHHHHC-CCCcEEEEe-cc
Confidence 2235888989999999764 34566666554 34444443222 4899998877765543 445777753 33
Q ss_pred CCCCCcHH--HHHHHHHHHHhc
Q 015201 374 VLVGTPEE--AVAHFFEVGKSM 393 (411)
Q Consensus 374 i~~~tp~E--ni~a~~~a~~~y 393 (411)
-...+|++ |+.++-..-+.|
T Consensus 195 s~YPtp~~~~nL~aI~~Lk~~f 216 (385)
T 1vli_A 195 AKYPAPPEYSNLSVIPMLAAAF 216 (385)
T ss_dssp SSSSCCGGGCCTTHHHHHHHHS
T ss_pred CCCCCChhhcCHHHHHHHHHHc
Confidence 23334444 566666555556
No 35
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=90.61 E-value=1.4 Score=40.64 Aligned_cols=109 Identities=17% Similarity=0.202 Sum_probs=63.0
Q ss_pred HHHHHHHHHhhCCCCCEEEE-ecCCcc------cHhHHhcCCCcEEEcCCCC-C--------------------------
Q 015201 275 IREIVSLVRTKCPETPIVLY-INGNGG------FLERMKGTGVDVIGLDWTV-D-------------------------- 320 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H-~CG~~~------~l~~~~e~g~d~l~~d~~~-d-------------------------- 320 (411)
+++.++.+++.+ ...++-| ..|+.. .+..+.+.|+|++-++... |
T Consensus 4 ~~~~f~~~~~~~-~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~ 82 (262)
T 2ekc_A 4 ISDKFTELKEKR-EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVL 82 (262)
T ss_dssp HHHHHHHHHHHT-BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhcC-CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHH
Confidence 445566665542 2223434 477753 2356678899998653211 1
Q ss_pred --HHHHHHHh-CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCCC
Q 015201 321 --MADGRKRL-GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 321 --i~~~~~~~-g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
+.++++.+ .-.+.+||..+|..-.|. .+.++++.+.+. .|+|+ ++.|+|.+..+++.++++|..
T Consensus 83 ~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~----~~f~~~~~~aG~-dgvii-------~dl~~ee~~~~~~~~~~~gl~ 149 (262)
T 2ekc_A 83 ELSETLRKEFPDIPFLLMTYYNPIFRIGL----EKFCRLSREKGI-DGFIV-------PDLPPEEAEELKAVMKKYVLS 149 (262)
T ss_dssp HHHHHHHHHCTTSCEEEECCHHHHHHHCH----HHHHHHHHHTTC-CEEEC-------TTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhcCCCCEEEEecCcHHHHhhH----HHHHHHHHHcCC-CEEEE-------CCCCHHHHHHHHHHHHHcCCc
Confidence 45566665 445666665555222343 344455555433 36666 356678899999999999854
No 36
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=90.60 E-value=2.7 Score=40.87 Aligned_cols=141 Identities=12% Similarity=0.047 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH----hHHhcCC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL----ERMKGTG 309 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l----~~~~e~g 309 (411)
++--+++++.+.++|++.|-++-+ ..||+.|+.+ +++.+.+ ++..+..+.-++...+ +.+.+.|
T Consensus 33 ~~~Kl~ia~~L~~~Gv~~IE~g~p---~~~~~d~e~v-----~~i~~~~----~~~~i~~l~r~~~~di~~a~~al~~ag 100 (370)
T 3rmj_A 33 KEEKIRVARQLEKLGVDIIEAGFA---AASPGDFEAV-----NAIAKTI----TKSTVCSLSRAIERDIRQAGEAVAPAP 100 (370)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEG---GGCHHHHHHH-----HHHHTTC----SSSEEEEEEESSHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC---CCCHHHHHHH-----HHHHHhC----CCCeEEEEecCCHHHHHHHHHHHhhCC
Confidence 345567788888999998865432 3567766542 3444332 2444555553444333 3445589
Q ss_pred CcEEEcC-C----------CCCHHHHHH----------HhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEE
Q 015201 310 VDVIGLD-W----------TVDMADGRK----------RLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHIL 368 (411)
Q Consensus 310 ~d~l~~d-~----------~~di~~~~~----------~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIl 368 (411)
++.+++- . ..+.++..+ .+|..+.+ +.-| .-.-+++.+.+.++.+.+.+. .++
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~-~~ed--~~r~~~~~~~~~~~~~~~~Ga---~~i 174 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEF-SCED--ALRSEIDFLAEICGAVIEAGA---TTI 174 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEE-EEET--GGGSCHHHHHHHHHHHHHHTC---CEE
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEE-ecCC--CCccCHHHHHHHHHHHHHcCC---CEE
Confidence 9888641 1 223333222 23433322 2111 123678888888877777643 345
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 369 NLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+...++...+ |+.+..+++++++.
T Consensus 175 ~l~DT~G~~~-P~~~~~lv~~l~~~ 198 (370)
T 3rmj_A 175 NIPDTVGYSI-PYKTEEFFRELIAK 198 (370)
T ss_dssp EEECSSSCCC-HHHHHHHHHHHHHH
T ss_pred EecCccCCcC-HHHHHHHHHHHHHh
Confidence 5444444334 55678888777764
No 37
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=90.49 E-value=2.3 Score=41.59 Aligned_cols=141 Identities=15% Similarity=0.017 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEE
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVI 313 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l 313 (411)
++-.+++++.+.++|++.|-++ ..-.+|.+++. ++.+.+.+...++..+.-++...++...+.|++.+
T Consensus 24 ~~~k~~ia~~L~~~Gv~~IE~g---~p~~~~~~~~~---------~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v 91 (382)
T 2ztj_A 24 TQDKVEIAKALDEFGIEYIEVT---TPVASPQSRKD---------AEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGI 91 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEC---CTTSCHHHHHH---------HHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCcCEEEEc---CCcCCHHHHHH---------HHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEE
Confidence 3455677888889999988653 23467777632 34444443334444444444345777888999988
Q ss_pred Ec-CC---------CCCHHH----------HHHHhCCCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCCCCeEEeCCC
Q 015201 314 GL-DW---------TVDMAD----------GRKRLGNDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGSRGHILNLGH 372 (411)
Q Consensus 314 ~~-d~---------~~di~~----------~~~~~g~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~~gfIls~gc 372 (411)
++ .. .++..+ ..+..|..+.+.. +... ..-+++.+.+.++++.+. .. .+.|. .
T Consensus 92 ~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~--~~ed~~~~~~~~~~~~~~~~~~~-a~-~i~l~--D 165 (382)
T 2ztj_A 92 DLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRF--SAEDTFRSEEQDLLAVYEAVAPY-VD-RVGLA--D 165 (382)
T ss_dssp EEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEE--EETTTTTSCHHHHHHHHHHHGGG-CS-EEEEE--E
T ss_pred EEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEE--EEEeCCCCCHHHHHHHHHHHHHh-cC-EEEec--C
Confidence 64 11 112222 2233452222322 2222 246788888888877776 33 34442 2
Q ss_pred CCCCCCcHHHHHHHHHHHHhc
Q 015201 373 GVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 373 ~i~~~tp~Eni~a~~~a~~~y 393 (411)
++. ...|+.+..+++++++.
T Consensus 166 T~G-~~~P~~~~~lv~~l~~~ 185 (382)
T 2ztj_A 166 TVG-VATPRQVYALVREVRRV 185 (382)
T ss_dssp TTS-CCCHHHHHHHHHHHHHH
T ss_pred CCC-CCCHHHHHHHHHHHHHh
Confidence 232 23466678888877764
No 38
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=90.47 E-value=1.1 Score=41.94 Aligned_cols=146 Identities=14% Similarity=0.100 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEE
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVI 313 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l 313 (411)
++..+++++++.++|++.|-+.-+..+-.-|.+ + ...++++.+.+. ++.++..|. .+...++...+.|++.+
T Consensus 25 ~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~-----~~~e~~~~i~~~-~~~~v~~l~-~n~~~i~~a~~~G~~~V 96 (295)
T 1ydn_A 25 TADKIALINRLSDCGYARIEATSFVSPKWVPQL-A-----DSREVMAGIRRA-DGVRYSVLV-PNMKGYEAAAAAHADEI 96 (295)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGG-T-----THHHHHHHSCCC-SSSEEEEEC-SSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCcCEEEEccCcCccccccc-c-----CHHHHHHHHHhC-CCCEEEEEe-CCHHHHHHHHHCCCCEE
Confidence 455667788888999999876533222111211 0 112334444443 367777786 34335788889999998
Q ss_pred EcCC-----------CCCHHH----------HHHHhCCCeeEEccCCcCc-----cCCCHHHHHHHHHHHHHHhCCCCeE
Q 015201 314 GLDW-----------TVDMAD----------GRKRLGNDISVQGNVDPAC-----LFSPLPALTDEIQRVVKCAGSRGHI 367 (411)
Q Consensus 314 ~~d~-----------~~di~~----------~~~~~g~~~~l~G~vd~~~-----L~gt~eeV~~ev~~~i~~~~~~gfI 367 (411)
.+.. ..+..+ ..+..| +.+.|.+.... -.-+++++.+.++++.+.+. ..+.
T Consensus 97 ~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G--~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~-d~i~ 173 (295)
T 1ydn_A 97 AVFISASEGFSKANINCTIAESIERLSPVIGAAINDG--LAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGC-HEVS 173 (295)
T ss_dssp EEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTT--CEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTC-SEEE
T ss_pred EEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcC--CeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCC-CEEE
Confidence 7642 122222 223345 34444443321 23588999888888777643 3566
Q ss_pred EeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 368 LNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 368 ls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
++..+++ ..|+.+..+++.+++.
T Consensus 174 l~Dt~G~---~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 174 LGDTIGR---GTPDTVAAMLDAVLAI 196 (295)
T ss_dssp EEETTSC---CCHHHHHHHHHHHHTT
T ss_pred ecCCCCC---cCHHHHHHHHHHHHHh
Confidence 6654554 3566778888877764
No 39
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.30 E-value=3.1 Score=39.31 Aligned_cols=139 Identities=11% Similarity=0.154 Sum_probs=82.3
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec--CCc--------c----cHhHHh
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN--GNG--------G----FLERMK 306 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C--G~~--------~----~l~~~~ 306 (411)
++..++.|+|++.+.--++.--+. +-.....+++.+.++++ |.|+++.+- |.. . ......
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~----~~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~ 187 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDA----QQRLNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELG 187 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCH----HHHHHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEEEEcCCCccH----HHHHHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHHHH
Confidence 456678899998743322221112 33445788999999987 788766542 221 1 133455
Q ss_pred cCCCcEEEcCCC----CCHH---HHHHH----hCCC-eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCC---
Q 015201 307 GTGVDVIGLDWT----VDMA---DGRKR----LGND-ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLG--- 371 (411)
Q Consensus 307 e~g~d~l~~d~~----~di~---~~~~~----~g~~-~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~g--- 371 (411)
++|+|.+-+... -+.. ++.+. .+-. +.+.||+ +++++.+.++..++. +..|++++..
T Consensus 188 ~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-------~~~~~~~~~~~a~~a-Ga~Gv~vGRaI~q 259 (304)
T 1to3_A 188 DSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGV-------DEKLFPRAVRVAMEA-GASGFLAGRAVWS 259 (304)
T ss_dssp TSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTS-------CTTTHHHHHHHHHHT-TCCEEEESHHHHG
T ss_pred HcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCC-------CHHHHHHHHHHHHHc-CCeEEEEehHHhC
Confidence 689999976542 2333 34444 3444 6667777 466777888888875 4457776543
Q ss_pred CCCCCCCcHHHH--------HHHHHHHHhc
Q 015201 372 HGVLVGTPEEAV--------AHFFEVGKSM 393 (411)
Q Consensus 372 c~i~~~tp~Eni--------~a~~~a~~~y 393 (411)
..+...-|.+-+ +++.+.+++.
T Consensus 260 ~~~~~~dp~~~~~~~~~~~~~~l~~iv~~~ 289 (304)
T 1to3_A 260 SVIGLPDTELMLRDVSAPKLQRLGEIVDEM 289 (304)
T ss_dssp GGTTCSCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHhhchHHHHHHHHHHhcC
Confidence 112113333444 8888877774
No 40
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.06 E-value=0.76 Score=40.56 Aligned_cols=126 Identities=11% Similarity=0.113 Sum_probs=74.1
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEcC
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGLD 316 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~d 316 (411)
+++.+.++|+|++.+.+.. .. ...+++++.++++ |.++++-..+-.+ .+..+.+.|+|.+.++
T Consensus 69 ~~~~~~~~Gad~v~v~~~~----~~--------~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVT----DV--------LTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEETTS----CH--------HHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeCCC----Ch--------hHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 3778889999999886532 11 2346677788887 5665543222222 3677888899988653
Q ss_pred CC--------CC---HHHHHHHhC-CCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHH
Q 015201 317 WT--------VD---MADGRKRLG-NDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVA 384 (411)
Q Consensus 317 ~~--------~d---i~~~~~~~g-~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~ 384 (411)
.. .+ +.++++.++ -.+...|||++. .++++++. |-.++++++.= +...-|.+.++
T Consensus 135 ~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~-----------~~~~~~~~-Gad~vvvGsai-~~~~d~~~~~~ 201 (211)
T 3f4w_A 135 TGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQ-----------TVKDYALL-GPDVVIVGSAI-THAADPAGEAR 201 (211)
T ss_dssp CCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTT-----------THHHHHTT-CCSEEEECHHH-HTCSSHHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHH-----------HHHHHHHc-CCCEEEECHHH-cCCCCHHHHHH
Confidence 21 13 344556553 345667888652 23334433 33466666531 12234677788
Q ss_pred HHHHHHHh
Q 015201 385 HFFEVGKS 392 (411)
Q Consensus 385 a~~~a~~~ 392 (411)
.+.+..++
T Consensus 202 ~l~~~~~~ 209 (211)
T 3f4w_A 202 KISQVLLQ 209 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88777665
No 41
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=89.90 E-value=14 Score=35.16 Aligned_cols=126 Identities=16% Similarity=0.131 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCEEEEec-CCCCCCCHH----HHHHHHHHHHHHHHHHHHhhC--CCCCEEEEecC-
Q 015201 228 TLLSHLTQAIADYIIYQVESG--AHCIQIFD-SWGGQLPPH----MWEQWSEPYIREIVSLVRTKC--PETPIVLYING- 297 (411)
Q Consensus 228 ~ll~~~~d~~~~~~~~~~e~G--~d~i~i~D-~~~~~iSp~----~f~ef~~Py~k~i~~~i~~~~--~g~~~~~H~CG- 297 (411)
++.+.+.++....++.+.+.| ++.++++. ...+++-|. .+ +-...++++.++.+|+.. |+.++++|.+.
T Consensus 105 ~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~-~~l~~~~~~a~~avr~~~~~p~~~v~~h~~~~ 183 (334)
T 1fob_A 105 TLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSY-SNIGALLHSGAWGVKDSNLATTPKIMIHLDDG 183 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCH-HHHHHHHHHHHHHHHTSCCSSCCEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhH-HHHHHHHHHHHHHHHHhccCCCCeEEEEcCCc
Confidence 455555566666666777766 67777664 334444221 22 355678888899999987 77788999983
Q ss_pred -Ccc----cHhHHhcCC------CcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCe
Q 015201 298 -NGG----FLERMKGTG------VDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGH 366 (411)
Q Consensus 298 -~~~----~l~~~~e~g------~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gf 366 (411)
+.. .++.+...| +|++++....- + .+ .++++.+.+..+++-+..++.=+
T Consensus 184 ~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~-------w----------~~---~~~~~~l~~~l~~~~~rygKpv~ 243 (334)
T 1fob_A 184 WSWDQQNYFYETVLATGELLSTDFDYFGVSYYPF-------Y----------SA---SATLASLKTSLANLQSTYDKPVV 243 (334)
T ss_dssp TCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSS-------S----------CT---TCCHHHHHHHHHHHHHHHCCCEE
T ss_pred CchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC-------c----------CC---CCCHHHHHHHHHHHHHHHCCCEE
Confidence 221 235555555 57776654320 0 00 15788888888888888876678
Q ss_pred EEeCCCCC
Q 015201 367 ILNLGHGV 374 (411)
Q Consensus 367 Ils~gc~i 374 (411)
|.-+||..
T Consensus 244 itEtG~~~ 251 (334)
T 1fob_A 244 VVETNWPV 251 (334)
T ss_dssp EEECCCCS
T ss_pred EEEccccc
Confidence 88888754
No 42
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=89.88 E-value=11 Score=35.65 Aligned_cols=153 Identities=15% Similarity=0.061 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CC----CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHH
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GG----QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERM 305 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~----~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~ 305 (411)
+..++.++.+++.|||.|-++-.+ +. .+|++.=.+-+.|..+.+.+.. ++|+. ++-... .++.-
T Consensus 49 ~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-----~vpIS--IDT~~~~Va~aA 121 (314)
T 3tr9_A 49 NSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-----PQLIS--VDTSRPRVMREA 121 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-----CSEEE--EECSCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-----CCeEE--EeCCCHHHHHHH
Confidence 455667888999999999887422 22 5777665566777666665432 55644 443333 45666
Q ss_pred hcCCCcEEE-cCC--CCCHHHHHHHhCCCeeEEccC-CcCccC-C----CHHHHHHHHHHHHHHhC----C-CCeEEeCC
Q 015201 306 KGTGVDVIG-LDW--TVDMADGRKRLGNDISVQGNV-DPACLF-S----PLPALTDEIQRVVKCAG----S-RGHILNLG 371 (411)
Q Consensus 306 ~e~g~d~l~-~d~--~~di~~~~~~~g~~~~l~G~v-d~~~L~-g----t~eeV~~ev~~~i~~~~----~-~gfIls~g 371 (411)
.+.|++++| +.. ..++..+.+++|-.+++|-.- +|.... . -.+|+.+..++.++.+. + ...||-||
T Consensus 122 l~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG 201 (314)
T 3tr9_A 122 VNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPG 201 (314)
T ss_dssp HHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC
Confidence 667999985 422 235777777888777776321 233221 1 13566676666666543 2 47999998
Q ss_pred CC---CCCCCcHHHHHHHH--HHHHhcCC
Q 015201 372 HG---VLVGTPEEAVAHFF--EVGKSMKY 395 (411)
Q Consensus 372 c~---i~~~tp~Eni~a~~--~a~~~yg~ 395 (411)
-+ +. .+..+|+..+- +..+++|.
T Consensus 202 ~G~~~F~-Kt~~~n~~lL~~l~~l~~lg~ 229 (314)
T 3tr9_A 202 FGQGNYG-KNVSENFYLLNKLPEFVAMGL 229 (314)
T ss_dssp CCSGGGC-CCHHHHHHHHHTTHHHHTTSS
T ss_pred CCchhhc-CCHHHHHHHHHHHHHHhcCCC
Confidence 77 53 44455666543 23445553
No 43
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.72 E-value=2.7 Score=38.34 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=65.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCC------CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWG------GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVD 311 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~------~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d 311 (411)
.+.++..++.|++.|++-+... +-++.+.+.+. .+++.+..+++ ++++++|. .++...+.|+|
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~----a~~l~~l~~~~--~~~liInd-----~~~lA~~~gAd 114 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAA----CEILADAAHRY--GALFAVND-----RADIARAAGAD 114 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHH----HHHHHHHHHHT--TCEEEEES-----CHHHHHHHTCS
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHH----HHHHHHHHHhh--CCEEEEeC-----HHHHHHHhCCC
Confidence 3455567889999999877542 23677766654 45666667766 67888762 45667778999
Q ss_pred EEEcCC-CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHH
Q 015201 312 VIGLDW-TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTD 352 (411)
Q Consensus 312 ~l~~d~-~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ 352 (411)
++++.. ..+..++++.++....+...+ .|++|+.+
T Consensus 115 GVHLg~~dl~~~~~r~~~~~~~~iG~S~------ht~~Ea~~ 150 (243)
T 3o63_A 115 VLHLGQRDLPVNVARQILAPDTLIGRST------HDPDQVAA 150 (243)
T ss_dssp EEEECTTSSCHHHHHHHSCTTCEEEEEE------CSHHHHHH
T ss_pred EEEecCCcCCHHHHHHhhCCCCEEEEeC------CCHHHHHH
Confidence 999854 457888888877544333211 56666544
No 44
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=89.68 E-value=14 Score=34.89 Aligned_cols=123 Identities=20% Similarity=0.220 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. -++-.++.++...++|+|+
T Consensus 78 r~~v~~~~v~~~~grvpViaGvg~~------------------------------------st~eai~la~~A~~~Gada 121 (314)
T 3qze_A 78 HIQVIRRVVDQVKGRIPVIAGTGAN------------------------------------STREAVALTEAAKSGGADA 121 (314)
T ss_dssp HHHHHHHHHHHHTTSSCEEEECCCS------------------------------------SHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEeCCCc------------------------------------CHHHHHHHHHHHHHcCCCE
Confidence 3455555666677788888765432 0233456777788899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHH
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMAD 323 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~ 323 (411)
+.+.-++-.-.|+ +=+.-|++++.+.. ++|++++.+ |.. . .+..+.+.+ +++.+ +...|+..
T Consensus 122 vlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~~ 191 (314)
T 3qze_A 122 CLLVTPYYNKPTQ----EGMYQHFRHIAEAV-----AIPQILYNVPGRTSCDMLPETVERLSKVP-NIIGIKEATGDLQR 191 (314)
T ss_dssp EEEECCCSSCCCH----HHHHHHHHHHHHHS-----CSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECSCCHHH
T ss_pred EEEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHhcCC-CEEEEEcCCCCHHH
Confidence 9887775544454 44667888888877 478988876 332 2 244555554 56655 34446655
Q ss_pred H---HHHhCCCeeEEccCCc
Q 015201 324 G---RKRLGNDISVQGNVDP 340 (411)
Q Consensus 324 ~---~~~~g~~~~l~G~vd~ 340 (411)
. .+..+++..+..|-|.
T Consensus 192 ~~~~~~~~~~~f~v~~G~d~ 211 (314)
T 3qze_A 192 AKEVIERVGKDFLVYSGDDA 211 (314)
T ss_dssp HHHHHHHSCTTSEEEESCGG
T ss_pred HHHHHHHcCCCeEEEecChH
Confidence 4 4445666666655554
No 45
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=89.61 E-value=1.2 Score=42.91 Aligned_cols=144 Identities=10% Similarity=0.097 Sum_probs=86.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCC-CCCCH---------------HHHHH--HHHHHHHHHHHHHHhhCCCCCEEEEecCCc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWG-GQLPP---------------HMWEQ--WSEPYIREIVSLVRTKCPETPIVLYINGNG 299 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~-~~iSp---------------~~f~e--f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~ 299 (411)
.+.+++..++|||++-+.---. +++|| ++|++ +-+..++.|.++.++. |++ ++-..=+.
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~-~~st~~d~ 114 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMI-FISTLFSR 114 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCE-EEEEECSH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCe-EEEeeCCH
Confidence 3445566789999986542100 12222 45554 4677788999999987 664 32233333
Q ss_pred ccHhHHhcCCCcEEEcCC--CCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 300 GFLERMKGTGVDVIGLDW--TVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 300 ~~l~~~~e~g~d~l~~d~--~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
..++.+.++|++++-+.. .+|+.-+++. .|+.+.+.-|+ .|.+|+...+.-+... |. .+||.= |.-.
T Consensus 115 ~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGm------at~~Ei~~Ave~i~~~-G~-~iiLlh-c~s~ 185 (349)
T 2wqp_A 115 AAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGM------NSIESIKKSVEIIREA-GV-PYALLH-CTNI 185 (349)
T ss_dssp HHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTT------CCHHHHHHHHHHHHHH-TC-CEEEEE-CCCC
T ss_pred HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCC------CCHHHHHHHHHHHHHc-CC-CEEEEe-ccCC
Confidence 467888889999997643 4566666554 34444443222 4899998888776664 33 788863 4333
Q ss_pred CCCcHH--HHHHHHHHHHhc
Q 015201 376 VGTPEE--AVAHFFEVGKSM 393 (411)
Q Consensus 376 ~~tp~E--ni~a~~~a~~~y 393 (411)
..+|++ |+.++-..-+.|
T Consensus 186 Yp~~~~~~nL~ai~~lk~~f 205 (349)
T 2wqp_A 186 YPTPYEDVRLGGMNDLSEAF 205 (349)
T ss_dssp SSCCGGGCCTHHHHHHHHHC
T ss_pred CCCChhhcCHHHHHHHHHHC
Confidence 334443 566666655666
No 46
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=89.57 E-value=13 Score=35.10 Aligned_cols=124 Identities=15% Similarity=0.188 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
+..+.++...+..++++|+++.+++. -++-.++.++...++|+|
T Consensus 76 Er~~v~~~~v~~~~grvpViaGvg~~------------------------------------st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 76 EHKRIIELCVEQVAKRVPVVAGAGSN------------------------------------STSEAVELAKHAEKAGAD 119 (315)
T ss_dssp HHHHHHHHHHHHHTTSSCBEEECCCS------------------------------------SHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhCCCCcEEEeCCCC------------------------------------CHHHHHHHHHHHHhcCCC
Confidence 34455566667777788888766431 023345677778889999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhc-CCCcEEEc-CCCCCH
Q 015201 251 CIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKG-TGVDVIGL-DWTVDM 321 (411)
Q Consensus 251 ~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e-~g~d~l~~-d~~~di 321 (411)
++.+.-++-.-.|+ +=+.-|++.+.+.. ++|++++.. |.. . .+..+.+ .+ +++.+ +..-|+
T Consensus 120 avlv~~P~y~~~~~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nIvgiKdssgd~ 189 (315)
T 3si9_A 120 AVLVVTPYYNRPNQ----RGLYTHFSSIAKAI-----SIPIIIYNIPSRSVIDMAVETMRDLCRDFK-NIIGVKDATGKI 189 (315)
T ss_dssp EEEEECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECSCCT
T ss_pred EEEECCCCCCCCCH----HHHHHHHHHHHHcC-----CCCEEEEeCchhhCCCCCHHHHHHHHhhCC-CEEEEEeCCCCH
Confidence 99887776544454 44667888888876 478888875 332 2 2445555 54 66655 333344
Q ss_pred ---HHHHHHhCCCeeEEccCCc
Q 015201 322 ---ADGRKRLGNDISVQGNVDP 340 (411)
Q Consensus 322 ---~~~~~~~g~~~~l~G~vd~ 340 (411)
.++.+..+++..+..|-|.
T Consensus 190 ~~~~~l~~~~~~~f~v~~G~d~ 211 (315)
T 3si9_A 190 ERASEQREKCGKDFVQLSGDDC 211 (315)
T ss_dssp HHHHHHHHHHCSSSEEEESCGG
T ss_pred HHHHHHHHHcCCCeEEEecCHH
Confidence 4455556666666555554
No 47
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=89.49 E-value=7.4 Score=35.00 Aligned_cols=135 Identities=17% Similarity=0.178 Sum_probs=74.9
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~ 315 (411)
+.++.+.++|+|.+.+.|..+.+- -.++..++++.+++.. ++|+++| |.+. .++.+.+.|+|.+.+
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~--------~~~~~~~~i~~i~~~~-~ipvi~~--ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASVE--------KRKTMLELVEKVAEQI-DIPFTVG--GGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSSS--------HHHHHHHHHHHHHTTC-CSCEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEECCchhhc--------CCcccHHHHHHHHHhC-CCCEEEe--CCCCCHHHHHHHHHcCCCEEEE
Confidence 445677889999999887654432 1234445555666554 6787765 3332 477788899999987
Q ss_pred CCC----C-CHHHHHHHhCCC-eeEEccCCcC------c--cCCCH----HHHHHHHHHHHHHhCCCCeEEeCCC--CCC
Q 015201 316 DWT----V-DMADGRKRLGND-ISVQGNVDPA------C--LFSPL----PALTDEIQRVVKCAGSRGHILNLGH--GVL 375 (411)
Q Consensus 316 d~~----~-di~~~~~~~g~~-~~l~G~vd~~------~--L~gt~----eeV~~ev~~~i~~~~~~gfIls~gc--~i~ 375 (411)
... . .+.++.+.+|.+ +.+. +|+. . ..|-. ....+.++++.+ .+-+.+++++-. +..
T Consensus 103 g~~~l~~p~~~~~~~~~~g~~~i~~~--~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~-~G~~~i~~~~~~~~g~~ 179 (253)
T 1thf_D 103 NTAAVENPSLITQIAQTFGSQAVVVA--IDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK-RGAGEILLTSIDRDGTK 179 (253)
T ss_dssp SHHHHHCTHHHHHHHHHHCGGGEEEE--EEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH-TTCSEEEEEETTTTTSC
T ss_pred ChHHHhChHHHHHHHHHcCCCcEEEE--EEEEccCCcEEEEECCCccccCCCHHHHHHHHHH-CCCCEEEEEeccCCCCC
Confidence 431 1 266777888743 3332 4442 1 12211 123344455444 333456664322 222
Q ss_pred CCCcHHHHHHHH
Q 015201 376 VGTPEEAVAHFF 387 (411)
Q Consensus 376 ~~tp~Eni~a~~ 387 (411)
.+.+++.++.+.
T Consensus 180 ~g~~~~~~~~l~ 191 (253)
T 1thf_D 180 SGYDTEMIRFVR 191 (253)
T ss_dssp SCCCHHHHHHHG
T ss_pred CCCCHHHHHHHH
Confidence 345566666554
No 48
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=89.49 E-value=1.9 Score=42.19 Aligned_cols=150 Identities=11% Similarity=0.062 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+...++++++.++|++.+.+ ..+-.--||..|+.+....++.+.+..++. |+|++- .-=+...++.+.++ +|++-
T Consensus 156 e~a~~~a~~~k~aGa~~vk~-q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~t-e~~d~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 156 EQVAAVAESIKAKGLKLIRG-GAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVIS-EIVTPADIEVALDY-VDVIQ 230 (385)
T ss_dssp HHHHHHHHHHHHTTCCEEEC-BSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEE-ECCSGGGHHHHTTT-CSEEE
T ss_pred HHHHHHHHHHHHcCCCeEEc-ccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEE-ecCCHHHHHHHHhh-CCEEE
Confidence 34456667777899998743 332222234444444556667777777777 676542 21222357888888 99987
Q ss_pred cCC--CCCHHHHHH--HhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeC-CCCCCCCCcH--HHHHHHH
Q 015201 315 LDW--TVDMADGRK--RLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNL-GHGVLVGTPE--EAVAHFF 387 (411)
Q Consensus 315 ~d~--~~di~~~~~--~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~-gc~i~~~tp~--Eni~a~~ 387 (411)
+.. ..+..-+++ .+|..+.+.-| +.+|.+|+...+..+... |...++|.- |.+.-|..+. =|+.++-
T Consensus 231 Igs~~~~n~~LL~~~a~~gkPVilk~G-----~~~t~~e~~~Ave~i~~~-Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~ 304 (385)
T 3nvt_A 231 IGARNMQNFELLKAAGRVDKPILLKRG-----LSATIEEFIGAAEYIMSQ-GNGKIILCERGIRTYEKATRNTLDISAVP 304 (385)
T ss_dssp ECGGGTTCHHHHHHHHTSSSCEEEECC-----TTCCHHHHHHHHHHHHTT-TCCCEEEEECCBCCSCCSSSSBCCTTHHH
T ss_pred ECcccccCHHHHHHHHccCCcEEEecC-----CCCCHHHHHHHHHHHHHc-CCCeEEEEECCCCCCCCCCccccCHHHHH
Confidence 643 234433333 34443333322 247999998888876654 444566643 2221111122 2556555
Q ss_pred HHHHhcCC
Q 015201 388 EVGKSMKY 395 (411)
Q Consensus 388 ~a~~~yg~ 395 (411)
..-+.++.
T Consensus 305 ~lk~~~~l 312 (385)
T 3nvt_A 305 ILKKETHL 312 (385)
T ss_dssp HHHHHBSS
T ss_pred HHHHhcCC
Confidence 54444553
No 49
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=89.25 E-value=15 Score=34.67 Aligned_cols=156 Identities=14% Similarity=0.147 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. + ++-.++.++...++|+|+
T Consensus 79 r~~v~~~~v~~~~grvpViaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gada 122 (315)
T 3na8_A 79 WDEVVDFTLKTVAHRVPTIVSVSDL-----------T-------------------------TAKTVRRAQFAESLGAEA 122 (315)
T ss_dssp HHHHHHHHHHHHTTSSCBEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEecCCC-----------C-------------------------HHHHHHHHHHHHhcCCCE
Confidence 3455555667777788888766432 0 133456777788899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHH-hcCCCcEEEc-CCCCCHH
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERM-KGTGVDVIGL-DWTVDMA 322 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~-~e~g~d~l~~-d~~~di~ 322 (411)
+.+.-++-.-.|+ +-+.-|++++.+.. ++|++++.+ |.. . .+..+ .+.+ ++..+ +...|+.
T Consensus 123 vlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~L~a~~p-nIvgiKdssgd~~ 192 (315)
T 3na8_A 123 VMVLPISYWKLNE----AEVFQHYRAVGEAI-----GVPVMLYNNPGTSGIDMSVELILRIVREVD-NVTMVKESTGDIQ 192 (315)
T ss_dssp EEECCCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHST-TEEEEEECSSCHH
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhC-----CCcEEEEeCcchhCcCCCHHHHHHHHhcCC-CEEEEECCCCCHH
Confidence 9887665444455 44667888888776 478888875 322 2 24455 5554 56655 3344655
Q ss_pred HH---HHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHH
Q 015201 323 DG---RKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGK 391 (411)
Q Consensus 323 ~~---~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~ 391 (411)
.. .+..+++..+..|.|... ...+.. |..|+|-+++|-. |+-+.+++++++
T Consensus 193 ~~~~~~~~~~~~f~v~~G~D~~~------------l~~l~~-G~~G~is~~an~~-----P~~~~~l~~a~~ 246 (315)
T 3na8_A 193 RMHKLRLLGEGRVPFYNGCNPLA------------LEAFVA-GAKGWCSAAPNLI-----PTLNGQLYQAVL 246 (315)
T ss_dssp HHHHHHHHTTTCSCEEECCGGGH------------HHHHHH-TCSEEEESGGGTC-----HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCchHHH------------HHHHHC-CCCEEEechhhhC-----HHHHHHHHHHHh
Confidence 54 444555555554444421 122222 3346665555432 455666666554
No 50
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.93 E-value=0.56 Score=44.92 Aligned_cols=141 Identities=11% Similarity=-0.013 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHh----HHhcCC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLE----RMKGTG 309 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~----~~~e~g 309 (411)
++-.+++++.+.++|++.|-++- ...||+.|+. .+++.+.+ ++..+....-++...++ .+.+.|
T Consensus 27 ~~~Kl~ia~~L~~~Gv~~IE~g~---p~~~~~d~e~-----v~~i~~~~----~~~~i~~l~r~~~~~i~~a~~al~~ag 94 (325)
T 3eeg_A 27 TEEKIIVAKALDELGVDVIEAGF---PVSSPGDFNS-----VVEITKAV----TRPTICALTRAKEADINIAGEALRFAK 94 (325)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEEC---TTSCHHHHHH-----HHHHHHHC----CSSEEEEECCSCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeC---CCCCHhHHHH-----HHHHHHhC----CCCEEEEeecCCHHHHHHHHHhhcccC
Confidence 34456778888899999886642 2368877643 24444443 25555445445543344 444559
Q ss_pred CcEEEcC-CC----------C----------CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEE
Q 015201 310 VDVIGLD-WT----------V----------DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHIL 368 (411)
Q Consensus 310 ~d~l~~d-~~----------~----------di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIl 368 (411)
++.+++- .. . +..+..+..|..++ .|.-|. -.-+++.+.+.++++.+.+ -.++
T Consensus 95 ~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~-f~~~d~--~~~~~~~~~~~~~~~~~~G---~~~i 168 (325)
T 3eeg_A 95 RSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE-FFCEDA--GRADQAFLARMVEAVIEAG---ADVV 168 (325)
T ss_dssp SEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE-EEEETG--GGSCHHHHHHHHHHHHHHT---CSEE
T ss_pred CCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE-EEcccc--ccchHHHHHHHHHHHHhcC---CCEE
Confidence 8887541 10 1 11222334564433 332221 2368888888888877764 3466
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 369 NLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+...++... .|+.+..+++++++.
T Consensus 169 ~l~DT~G~~-~P~~v~~lv~~l~~~ 192 (325)
T 3eeg_A 169 NIPDTTGYM-LPWQYGERIKYLMDN 192 (325)
T ss_dssp ECCBSSSCC-CHHHHHHHHHHHHHH
T ss_pred EecCccCCc-CHHHHHHHHHHHHHh
Confidence 666555544 456688888887764
No 51
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=88.93 E-value=2.2 Score=40.13 Aligned_cols=143 Identities=12% Similarity=0.048 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHH---HHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMW---EQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGV 310 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f---~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~ 310 (411)
++..+++++.+.++|++.|-++- +.+|+.. .+. .+++..+++. ++.++..+.+ +...++...+.|+
T Consensus 26 ~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~p~~~d~-----~~~~~~~~~~-~~~~~~~l~~-~~~~i~~a~~ag~ 94 (298)
T 2cw6_A 26 TPVKIKLIDMLSEAGLSVIETTS----FVSPKWVPQMGDH-----TEVLKGIQKF-PGINYPVLTP-NLKGFEAAVAAGA 94 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEECCEE----CCCTTTCGGGTTH-----HHHHHHSCCC-TTCBCCEECC-SHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCcCEEEECC----CcCcccccccCCH-----HHHHHHHhhC-CCCEEEEEcC-CHHhHHHHHHCCC
Confidence 45556778888899999875432 2333211 111 1234444432 3555444442 3235788889999
Q ss_pred cEEEcCCCC-CH--------------------HHHHHHhCCCeeEEccCCcC----c-cCCCHHHHHHHHHHHHHHhCCC
Q 015201 311 DVIGLDWTV-DM--------------------ADGRKRLGNDISVQGNVDPA----C-LFSPLPALTDEIQRVVKCAGSR 364 (411)
Q Consensus 311 d~l~~d~~~-di--------------------~~~~~~~g~~~~l~G~vd~~----~-L~gt~eeV~~ev~~~i~~~~~~ 364 (411)
+.+++-... |. .+..+..|. .+.+++-.. . -.-+++++.+.++++.+.+ ..
T Consensus 95 ~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~--~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G-a~ 171 (298)
T 2cw6_A 95 KEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI--SVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG-CY 171 (298)
T ss_dssp SEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTC--EEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTT-CS
T ss_pred CEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC-CC
Confidence 998752211 11 122233453 344443321 1 1247888887777776653 33
Q ss_pred CeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 365 GHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 365 gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.+.|. .++. ...|+.+..+++.+++.
T Consensus 172 ~i~l~--DT~G-~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 172 EISLG--DTIG-VGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp EEEEE--ETTS-CCCHHHHHHHHHHHHHH
T ss_pred EEEec--CCCC-CcCHHHHHHHHHHHHHh
Confidence 44444 2232 24566788888777764
No 52
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.82 E-value=15 Score=34.24 Aligned_cols=123 Identities=13% Similarity=0.139 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|++..+++. + ++-.++.++...++|+|+
T Consensus 62 r~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gada 105 (297)
T 3flu_A 62 HTAVIEAVVKHVAKRVPVIAGTGAN-----------N-------------------------TVEAIALSQAAEKAGADY 105 (297)
T ss_dssp HHHHHHHHHHHHTTSSCEEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEeCCCc-----------C-------------------------HHHHHHHHHHHHHcCCCE
Confidence 3455555667777789988766442 0 233456677788899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHH
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMAD 323 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~ 323 (411)
+.+.-++-.-.|. +=+.-|++.+.+.. +.|++++.+ |.. . .+..+.+.+ ++..+ +...|+..
T Consensus 106 vlv~~P~y~~~~~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiKdssgd~~~ 175 (297)
T 3flu_A 106 TLSVVPYYNKPSQ----EGIYQHFKTIAEAT-----SIPMIIYNVPGRTVVSMTNDTILRLAEIP-NIVGVKEASGNIGS 175 (297)
T ss_dssp EEEECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSSCCCHHHHHHHTTST-TEEEEEECSCCHHH
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEECCchhccCCCHHHHHHHHcCC-CEEEEEeCCCCHHH
Confidence 9887765443454 34566888888876 478888875 322 2 234455543 55555 33446554
Q ss_pred H---HHHhCCCeeEEccCCc
Q 015201 324 G---RKRLGNDISVQGNVDP 340 (411)
Q Consensus 324 ~---~~~~g~~~~l~G~vd~ 340 (411)
. .+..+++..+..|-|.
T Consensus 176 ~~~~~~~~~~~f~v~~G~d~ 195 (297)
T 3flu_A 176 NIELINRAPEGFVVLSGDDH 195 (297)
T ss_dssp HHHHHHHSCTTCEEEECCGG
T ss_pred HHHHHHhcCCCeEEEECcHH
Confidence 4 4555666666655554
No 53
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=88.41 E-value=7.7 Score=36.69 Aligned_cols=62 Identities=23% Similarity=0.235 Sum_probs=38.5
Q ss_pred HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 243 YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
.+.+.|+..|.+.......++ .+++.++++.+++. +..+.+ +.|... .++.+++.|++.+++
T Consensus 95 ~~~~~g~~~i~~~gGe~p~~~--------~~~~~~li~~i~~~--~~~i~~-s~g~l~~e~l~~L~~ag~~~v~i 158 (348)
T 3iix_A 95 LAVQFGAKTIVLQSGEDPYXM--------PDVISDIVKEIKKM--GVAVTL-SLGEWPREYYEKWKEAGADRYLL 158 (348)
T ss_dssp HHHHTTCSEEEEEESCCGGGT--------THHHHHHHHHHHTT--SCEEEE-ECCCCCHHHHHHHHHHTCCEEEC
T ss_pred HHHHCCCCEEEEEeCCCCCcc--------HHHHHHHHHHHHhc--CceEEE-ecCCCCHHHHHHHHHhCCCEEee
Confidence 345678998877543212233 25667778888876 443332 334443 578899999998865
No 54
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=88.09 E-value=18 Score=34.31 Aligned_cols=156 Identities=10% Similarity=0.036 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. + ++-.++.++...++|+|+
T Consensus 89 r~~vi~~~ve~~~grvpViaGvg~~-----------s-------------------------t~eai~la~~A~~~Gada 132 (332)
T 2r8w_A 89 RRRAIEAAATILRGRRTLMAGIGAL-----------R-------------------------TDEAVALAKDAEAAGADA 132 (332)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEECCS-----------S-------------------------HHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEecCCC-----------C-------------------------HHHHHHHHHHHHhcCCCE
Confidence 3455555667777789988766441 0 133446677778899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHhcCCCcEEEc-CCCCC---
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMKGTGVDVIGL-DWTVD--- 320 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~e~g~d~l~~-d~~~d--- 320 (411)
+.+.-++-.-.|+ +=+.-|++.+.+.. ++|++++.. |. .. .+..+.+.+ +++.+ +..-|
T Consensus 133 vlv~~P~Y~~~s~----~~l~~~f~~VA~a~-----~lPiilYn~P~~tg~~l~~e~~~~La~~p-nIvgiKdssgd~~~ 202 (332)
T 2r8w_A 133 LLLAPVSYTPLTQ----EEAYHHFAAVAGAT-----ALPLAIYNNPTTTRFTFSDELLVRLAYIP-NIRAIKMPLPADAD 202 (332)
T ss_dssp EEECCCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEECCHHHHCCCCCHHHHHHHHTST-TEEEEEECCCTTCC
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHcCC-CEEEEEeCCCCchh
Confidence 9887665443455 45667888888765 478888874 43 22 244555543 56655 44456
Q ss_pred -HHHHHHHh---CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHH
Q 015201 321 -MADGRKRL---GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGK 391 (411)
Q Consensus 321 -i~~~~~~~---g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~ 391 (411)
+..+.+.. +++..+. .|..+-+ ...+. .|..|+|-+.+|- -|+-+.+++++++
T Consensus 203 ~~~~~~~l~~~~~~~f~v~--------~G~D~~~----l~~l~-~G~~G~is~~anv-----~P~~~~~l~~a~~ 259 (332)
T 2r8w_A 203 YAGELARLRPKLSDDFAIG--------YSGDWGC----TDATL-AGGDTWYSVVAGL-----LPVPALQLMRAAQ 259 (332)
T ss_dssp HHHHHHHHTTTSCTTCEEE--------ECCHHHH----HHHHH-TTCSEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEE--------eCchHHH----HHHHH-CCCCEEEeCHHHh-----CHHHHHHHHHHHH
Confidence 77766543 2223222 2443322 22222 2345777666553 2455666666554
No 55
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=88.06 E-value=17 Score=33.81 Aligned_cols=121 Identities=18% Similarity=0.256 Sum_probs=72.9
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|+++.+++. + ++-.++.++...++|+|++
T Consensus 57 ~~v~~~~~~~~~gr~pviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 100 (291)
T 3tak_A 57 TQVIKEIIRVANKRIPIIAGTGAN-----------S-------------------------TREAIELTKAAKDLGADAA 100 (291)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCS-----------S-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 455555667777789988766441 0 2333466777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|+ +=+.-|++++.+.. +.|++++.+ |.. . .+..+.+.+ ++..+ +...|+...
T Consensus 101 lv~~P~y~~~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~ssgd~~~~ 170 (291)
T 3tak_A 101 LLVTPYYNKPTQ----EGLYQHYKAIAEAV-----ELPLILYNVPGRTGVDLSNDTAVRLAEIP-NIVGIKDATGDVPRG 170 (291)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHHHHTTST-TEEEEEECSCCHHHH
T ss_pred EEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEecccccCCCCCHHHHHHHHcCC-CEEEEEeCCCCHHHH
Confidence 887765443454 34567888888876 478888875 332 2 234455543 55555 334466554
Q ss_pred ---HHHhCCCeeEEccCC
Q 015201 325 ---RKRLGNDISVQGNVD 339 (411)
Q Consensus 325 ---~~~~g~~~~l~G~vd 339 (411)
.+..+++..+..|-|
T Consensus 171 ~~~~~~~~~~f~v~~G~d 188 (291)
T 3tak_A 171 KALIDALNGKMAVYSGDD 188 (291)
T ss_dssp HHHHHHHTTSSEEEECCH
T ss_pred HHHHHHcCCCeEEEECcH
Confidence 444555554444333
No 56
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=87.78 E-value=17 Score=34.86 Aligned_cols=120 Identities=14% Similarity=0.195 Sum_probs=72.8
Q ss_pred HHHhCCCEEEEecCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcCCCC
Q 015201 244 QVESGAHCIQIFDSWG--GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLDWTV 319 (411)
Q Consensus 244 ~~e~G~d~i~i~D~~~--~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d~~~ 319 (411)
..+.|++.|++...+. ..++ .+++.++++.+++. +..+.+ +.|... .++.+++.|++.++++-..
T Consensus 111 ~~~~g~~~i~~~gg~~~p~~~~--------~~~l~~ll~~ik~~--g~~i~~-t~G~l~~e~l~~L~~aGvd~v~i~les 179 (369)
T 1r30_A 111 AKAAGSTRFCMGAAWKNPHERD--------MPYLEQMVQGVKAM--GLEACM-TLGTLSESQAQRLANAGLDYYNHNLDT 179 (369)
T ss_dssp HHHTTCSEEEEEECCSSCCTTT--------HHHHHHHHHHHHHT--TSEEEE-ECSSCCHHHHHHHHHHCCCEEECCCBS
T ss_pred HHHcCCcEEEEEeCCCCCCcCC--------HHHHHHHHHHHHHc--CCeEEE-ecCCCCHHHHHHHHHCCCCEEeecCcC
Confidence 3457889888766542 2222 46677788888876 444433 556654 4788999999999875443
Q ss_pred CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC--CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 320 DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS--RGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 320 di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~--~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
+ .+..+++.+ .++.+++.+.++.+.+.+-. -++|++. +-..|.+..+++.+++.+
T Consensus 180 ~-~e~~~~i~~-------------~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl------~et~ed~~~~l~~l~~l~ 236 (369)
T 1r30_A 180 S-PEFYGNIIT-------------TRTYQERLDTLEKVRDAGIKVCSGGIVGL------GETVKDRAGLLLQLANLP 236 (369)
T ss_dssp C-HHHHHHHCC-------------SSCHHHHHHHHHHHHHHHCEEECCEEECS------SCCHHHHHHHHHHHHSSS
T ss_pred C-HHHHHHhCC-------------CCCHHHHHHHHHHHHHcCCeeeeeeEeeC------CCCHHHHHHHHHHHHhhc
Confidence 4 333333331 13677777777666555322 2333322 234677778888787776
No 57
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=87.75 E-value=4.3 Score=41.52 Aligned_cols=96 Identities=15% Similarity=0.166 Sum_probs=64.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW 317 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~ 317 (411)
.+.++..++.|++.|++-+... +.+.+ ....+++.+..+++ ++++++|. .++...+.|.|++|+..
T Consensus 28 ~~~ve~al~~Gv~~vQlR~K~~---~~~~~----~~~a~~l~~l~~~~--~v~liIND-----~~dlA~~~gAdGVHLgq 93 (540)
T 3nl6_A 28 YGQVEAGLQNGVTLVQIREKDA---DTKFF----IEEALQIKELCHAH--NVPLIIND-----RIDVAMAIGADGIHVGQ 93 (540)
T ss_dssp HHHHHHHHHTTCSEEEECCSSS---CTTHH----HHHHHHHHHHHHHT--TCCEEECS-----CSHHHHHTTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEEecCCC---CHHHH----HHHHHHHHHHHHhc--CCEEEEeC-----cHHHHHHcCCCEEEECh
Confidence 3445677789999999877543 33333 33455666666766 68888863 56777889999999954
Q ss_pred -CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHH
Q 015201 318 -TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDE 353 (411)
Q Consensus 318 -~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~e 353 (411)
.+++.++++.+|.+..+...+ .|++|+++.
T Consensus 94 ~dl~~~~ar~~lg~~~iiG~S~------ht~eea~~A 124 (540)
T 3nl6_A 94 DDMPIPMIRKLVGPDMVIGWSV------GFPEEVDEL 124 (540)
T ss_dssp TSSCHHHHHHHHCTTSEEEEEE------CSHHHHHHH
T ss_pred hhcCHHHHHHHhCCCCEEEEEC------CCHHHHHHH
Confidence 467899999887654443222 367776544
No 58
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.74 E-value=2.6 Score=40.38 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-h--HHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-E--RMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~--~~~e~g~ 310 (411)
+++.+.++.+.++|+|.|.+.|..|. +.|+...++ ++.+++..|++++-+|.+.+... + . .-.+.|+
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~~v~~l--------v~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa 239 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLGV-LSPEETFQG--------VDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGV 239 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTCC-CCHHHHHHH--------HHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCC-cCHHHHHHH--------HHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCC
Confidence 34455666778899999999887654 788877665 34444444467899999877652 2 2 2336799
Q ss_pred cEEE
Q 015201 311 DVIG 314 (411)
Q Consensus 311 d~l~ 314 (411)
+.+.
T Consensus 240 ~~vd 243 (337)
T 3ble_A 240 KGLH 243 (337)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9985
No 59
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=87.47 E-value=4.8 Score=38.92 Aligned_cols=106 Identities=10% Similarity=0.059 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH----------HHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 232 HLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM----------WEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 232 ~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~----------f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++.- .-+..++++.+++..|.-|+.+-+.+
T Consensus 158 ~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR-~rf~~evv~aVr~~vg~~~v~vRls~ 236 (361)
T 3gka_A 158 GVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENR-ARLLLEVVDAAIDVWSAARVGVHLAP 236 (361)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH-SHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhc-HHHHHHHHHHHHHHcCCCeEEEeccc
Confidence 3334444556677889999998875432 1344420 1111 22344555555554322267776654
Q ss_pred Cc------------c---cHhHHhcCCCcEEEcCCC----CCHHHHHHHhCCCeeEEccC
Q 015201 298 NG------------G---FLERMKGTGVDVIGLDWT----VDMADGRKRLGNDISVQGNV 338 (411)
Q Consensus 298 ~~------------~---~l~~~~e~g~d~l~~d~~----~di~~~~~~~g~~~~l~G~v 338 (411)
.. . +...+.+.|+|.+++... .-...+|+.++..++..|++
T Consensus 237 ~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi 296 (361)
T 3gka_A 237 RGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNENF 296 (361)
T ss_dssp TCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESSC
T ss_pred ccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCCC
Confidence 31 1 135566789999987432 23677888887666666765
No 60
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=87.13 E-value=5.2 Score=38.72 Aligned_cols=106 Identities=10% Similarity=0.049 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH----------HHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 232 HLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM----------WEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 232 ~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~----------f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++. =..+..++++.+++..|..|+.+-+.+
T Consensus 150 ~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslen-R~rf~~eiv~aVr~~vg~~~v~vRls~ 228 (362)
T 4ab4_A 150 DIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLEN-RARLLLEVTDAAIEVWGAQRVGVHLAP 228 (362)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhh-HHHHHHHHHHHHHHhcCCCceEEEeec
Confidence 3334444556677889999998875432 1344420 111 123444555555554322267766654
Q ss_pred Cc------------c---cHhHHhcCCCcEEEcCCC----CCHHHHHHHhCCCeeEEccC
Q 015201 298 NG------------G---FLERMKGTGVDVIGLDWT----VDMADGRKRLGNDISVQGNV 338 (411)
Q Consensus 298 ~~------------~---~l~~~~e~g~d~l~~d~~----~di~~~~~~~g~~~~l~G~v 338 (411)
.. . +...+.+.|+|.+++... .-...+|+.++..++..|++
T Consensus 229 ~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi 288 (362)
T 4ab4_A 229 RADAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNERF 288 (362)
T ss_dssp TCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESSC
T ss_pred cccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCCC
Confidence 31 1 135566789999987432 23677888887666666765
No 61
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.96 E-value=2.2 Score=39.54 Aligned_cols=110 Identities=11% Similarity=0.128 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhhCCCCCEEEEecCCcc------cHhHHhcCCCcEEEcC-----CCCC----------------------
Q 015201 274 YIREIVSLVRTKCPETPIVLYINGNGG------FLERMKGTGVDVIGLD-----WTVD---------------------- 320 (411)
Q Consensus 274 y~k~i~~~i~~~~~g~~~~~H~CG~~~------~l~~~~e~g~d~l~~d-----~~~d---------------------- 320 (411)
.+++.++.+++.+....+-+-.+|+.. .+..+.+.|+|++.++ +..|
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 355667777766422223455678862 2455677899999764 2222
Q ss_pred --HHHHHHH-hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 321 --MADGRKR-LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 --i~~~~~~-~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++++. ..-.+.+||-.||..-.| +.+.++++.+.+.+ |+|+ ++.|+|....+.+.++++|-
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g----~e~f~~~~~~aGvd-gvii-------~Dlp~ee~~~~~~~~~~~gl 149 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANG----IDEFYTKAQAAGVD-SVLI-------ADVPVEESAPFSKAAKAHGI 149 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHC----HHHHHHHHHHHTCC-EEEE-------TTSCGGGCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhh----HHHHHHHHHHcCCC-EEEe-------CCCCHhhHHHHHHHHHHcCC
Confidence 1223443 233477787777732234 24455555554333 5555 24445556666666666664
No 62
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=86.94 E-value=19 Score=33.26 Aligned_cols=156 Identities=10% Similarity=0.005 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCC--EEEEecC------C-------
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETP--IVLYING------N------- 298 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~--~~~H~CG------~------- 298 (411)
.+.+.+.++...+.|++.|.+.- ...--+++.| +.+...++++.+.++++ |+. +.+|.+. +
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~~~~-~~~~~~l~~l~~~a~~~--Gv~~~l~~En~~~e~~~~~t~~~~~~ 182 (303)
T 3l23_A 107 MEYWKATAADHAKLGCKYLIQPM-MPTITTHDEA-KLVCDIFNQASDVIKAE--GIATGFGYHNHNMEFNRVATKEQQEK 182 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECS-CCCCCSHHHH-HHHHHHHHHHHHHHHHT--TCTTCEEEECCSGGGSEECCTTTC--
T ss_pred HHHHHHHHHHHHHcCCCEEEECC-CCCCCCHHHH-HHHHHHHHHHHHHHHHC--CCcceEEEccCcceeecccccccccc
Confidence 34445566677788999987642 1122466666 55689999999999988 789 9999876 2
Q ss_pred ------------cc-cHhHHh-cCCCcE--EEcC------CCCCHHHHHHHhCCCeeEEccCCcCccCC-CHHHHHHHHH
Q 015201 299 ------------GG-FLERMK-GTGVDV--IGLD------WTVDMADGRKRLGNDISVQGNVDPACLFS-PLPALTDEIQ 355 (411)
Q Consensus 299 ------------~~-~l~~~~-e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~G~vd~~~L~g-t~eeV~~ev~ 355 (411)
.. .++.+. +.+-+. +.+| ...|+.+..+++++++..+=-=| ....| +-+-=-..+.
T Consensus 183 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~D~~h~~~~g~d~~~~i~~~~~ri~~vH~kD-~~~~G~~G~id~~~i~ 261 (303)
T 3l23_A 183 VKGNPFAAFMKVGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKD-RAVFGQSGMMNFEMIF 261 (303)
T ss_dssp --------CCCCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHCTTTEEEEEECC-SSSTTSSSCCCHHHHH
T ss_pred cccccccccccCchHHHHHHHHhCCchhEEEEEehHHHHHcCCCHHHHHHHhcCcEEEEEecC-CcCCCCCCccCHHHHH
Confidence 11 355554 355442 3444 24589899899998765431112 22235 3322234455
Q ss_pred HHHHHhCCCCeEEeCCCCCC-CCCcHHHHHHHHHHHHhcCC
Q 015201 356 RVVKCAGSRGHILNLGHGVL-VGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 356 ~~i~~~~~~gfIls~gc~i~-~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++..+-.|+|+-... .| .+.|.+.++.-++..+++|.
T Consensus 262 ~~L~~~gy~G~ivE~~~-~~~~~~p~~~~~~s~~~l~~~~~ 301 (303)
T 3l23_A 262 KQMYANGIKDYFVELEQ-MPDGRTQFAGVKDCADYLIKAPF 301 (303)
T ss_dssp HHHHHHTCCCEEECCCC-CTTSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCCCEEEEEecC-CccCCCHHHHHHHHHHHHHHcCC
Confidence 56666654577754432 22 24588999999999998874
No 63
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=86.80 E-value=2.1 Score=40.28 Aligned_cols=71 Identities=13% Similarity=0.044 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc----cHhHHhcCCCc
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG----FLERMKGTGVD 311 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~----~l~~~~e~g~d 311 (411)
+..++++.+.++|+|.|.+.|..|. ..|+...+. ++.+++..|++|+.+|.+.+.. ..-.-.+.|++
T Consensus 160 ~~~~~~~~~~~~G~d~i~l~DT~G~-~~P~~~~~l--------v~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 160 QVAWVARELQQMGCYEVSLGDTIGV-GTAGATRRL--------IEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESSSC-CCHHHHHHH--------HHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC-cCHHHHHHH--------HHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 3445555677889999999976664 788776654 4555555445789999976654 23334468999
Q ss_pred EEEc
Q 015201 312 VIGL 315 (411)
Q Consensus 312 ~l~~ 315 (411)
.++.
T Consensus 231 ~vd~ 234 (302)
T 2ftp_A 231 VFDS 234 (302)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 64
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=86.63 E-value=9.6 Score=36.61 Aligned_cols=147 Identities=9% Similarity=0.082 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhCCC-----EEEEe----cCCC-------CCCC-HHHHHH--HHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 236 AIADYIIYQVESGAH-----CIQIF----DSWG-------GQLP-PHMWEQ--WSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d-----~i~i~----D~~~-------~~iS-p~~f~e--f~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
...+.+++..++|+| .|-+- |... +..+ -+.|++ +-+..+++|.++.++. |++ ++=..
T Consensus 22 ~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~--Gi~-~~st~ 98 (350)
T 3g8r_A 22 HGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKAN--GFK-AICTP 98 (350)
T ss_dssp HHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHT--TCE-EEEEE
T ss_pred HHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCc-EEecc
Confidence 334555666778887 65432 1110 1111 134443 6788899999999998 664 22232
Q ss_pred CCcccHhHHhcCCCcEEEcCC--CCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCC
Q 015201 297 GNGGFLERMKGTGVDVIGLDW--TVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGH 372 (411)
Q Consensus 297 G~~~~l~~~~e~g~d~l~~d~--~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc 372 (411)
=+...++.+.++|++++-+.. .+|+.-+++. .|+.+.+.-|+ .|.+|+...+.-+... +. .+||- =|
T Consensus 99 fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGm------stl~Ei~~Ave~i~~~-g~-~viLl-hC 169 (350)
T 3g8r_A 99 FDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAG------ARREDIDKVVSFMLHR-GK-DLTIM-HC 169 (350)
T ss_dssp CSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTT------CCHHHHHHHHHHHHTT-TC-CEEEE-EC
T ss_pred CCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCC------CCHHHHHHHHHHHHHc-CC-CEEEE-ec
Confidence 333468889999999997643 4566666553 34444443222 5899998888776654 33 57773 13
Q ss_pred CCCCCCcHH--HHHHHHHHHHhcC
Q 015201 373 GVLVGTPEE--AVAHFFEVGKSMK 394 (411)
Q Consensus 373 ~i~~~tp~E--ni~a~~~a~~~yg 394 (411)
.-...+|++ |+.++-..-+.|+
T Consensus 170 ~s~YPt~~~~~nL~aI~~Lk~~fp 193 (350)
T 3g8r_A 170 VAEYPTPDDHLHLARIKTLRQQYA 193 (350)
T ss_dssp CCCSSCCGGGCCTTHHHHHHHHCT
T ss_pred CCCCCCCcccCCHHHHHHHHHHCC
Confidence 323334554 6677666666673
No 65
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=86.47 E-value=3.3 Score=38.85 Aligned_cols=71 Identities=18% Similarity=0.177 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-h--HHhcCCCc
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-E--RMKGTGVD 311 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~--~~~e~g~d 311 (411)
++.+.++.+.++|++.|.+.|..| .++|+.+.+++. .+++..|++++-+|.+-+... + . .-.+.|++
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~~~~lv~--------~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~ 227 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIG-VGTPGIMKDMLS--------AVMQEVPLAALAVHCHDTYGQALANTLMALQMGVS 227 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTS-CCCHHHHHHHHH--------HHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCEEEecCCCC-CcCHHHHHHHHH--------HHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 344555677788999999998765 589988877543 333333356788999877652 2 2 23467998
Q ss_pred EEEc
Q 015201 312 VIGL 315 (411)
Q Consensus 312 ~l~~ 315 (411)
.+..
T Consensus 228 ~vd~ 231 (298)
T 2cw6_A 228 VVDS 231 (298)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8754
No 66
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=86.31 E-value=4.8 Score=36.24 Aligned_cols=127 Identities=13% Similarity=0.157 Sum_probs=73.5
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEE---
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVI--- 313 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l--- 313 (411)
+|++.+.++|+|.+.++..... ...+.++.++++ |....+=....+. .++.+.+. +|.+
T Consensus 78 ~~i~~~~~aGad~itvH~Ea~~-------------~~~~~i~~i~~~--G~k~gval~p~t~~e~l~~~l~~-~D~Vl~m 141 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHLEATE-------------NPGALIKDIREN--GMKVGLAIKPGTSVEYLAPWANQ-IDMALVM 141 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCS-------------CHHHHHHHHHHT--TCEEEEEECTTSCGGGTGGGGGG-CSEEEEE
T ss_pred HHHHHHHHcCCCEEEEccCCch-------------hHHHHHHHHHHc--CCCEEEEEcCCCCHHHHHHHhcc-CCeEEEe
Confidence 4667778899999988743221 135668888887 4555554544443 45444442 4444
Q ss_pred EcCCC--------CC---HHHHHHHhCC-CeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHH
Q 015201 314 GLDWT--------VD---MADGRKRLGN-DISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEE 381 (411)
Q Consensus 314 ~~d~~--------~d---i~~~~~~~g~-~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~E 381 (411)
+++.. .. +.++++..++ .+.+-|||++ +.++++++.+. ..+|.++.- +...-|.+
T Consensus 142 sv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~-----------~t~~~~~~aGA-d~~VvGsaI-f~a~dp~~ 208 (228)
T 3ovp_A 142 TVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP-----------DTVHKCAEAGA-NMIVSGSAI-MRSEDPRS 208 (228)
T ss_dssp SSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCST-----------TTHHHHHHHTC-CEEEESHHH-HTCSCHHH
T ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCH-----------HHHHHHHHcCC-CEEEEeHHH-hCCCCHHH
Confidence 22211 12 5566666543 4778899987 33344455443 366666531 11233678
Q ss_pred HHHHHHHHHHhcC
Q 015201 382 AVAHFFEVGKSMK 394 (411)
Q Consensus 382 ni~a~~~a~~~yg 394 (411)
+++.+.+.++++-
T Consensus 209 ~~~~l~~~~~~~~ 221 (228)
T 3ovp_A 209 VINLLRNVCSEAA 221 (228)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877763
No 67
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=86.02 E-value=21 Score=32.76 Aligned_cols=148 Identities=9% Similarity=0.002 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcC--CC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGT--GV 310 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~--g~ 310 (411)
.+..++.++.+++.|||.|-++-.. ..++++.- ++|++..+++.. ++|+.+ +.... .++.-.+. |.
T Consensus 24 ~~~a~~~a~~~v~~GAdiIDIg~g~-~~v~~~ee-------~~rvv~~i~~~~-~~pisI--DT~~~~v~~aAl~a~~Ga 92 (262)
T 1f6y_A 24 PAPVQEWARRQEEGGARALDLNVGP-AVQDKVSA-------MEWLVEVTQEVS-NLTLCL--DSTNIKAIEAGLKKCKNR 92 (262)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEBCC-----CHHHH-------HHHHHHHHHTTC-CSEEEE--ECSCHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCcEEEECCCC-CCCChHHH-------HHHHHHHHHHhC-CCeEEE--eCCCHHHHHHHHhhCCCC
Confidence 3566777889999999999776522 23454332 234444554432 566554 33333 45555555 99
Q ss_pred cEEE-cCCCC----CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHh---C-C-CCeEEeCCCC-CCCC--
Q 015201 311 DVIG-LDWTV----DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCA---G-S-RGHILNLGHG-VLVG-- 377 (411)
Q Consensus 311 d~l~-~d~~~----di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~---~-~-~gfIls~gc~-i~~~-- 377 (411)
++++ +.... .+..+.+++|-.+++|-. +..-.-.|.++..+..++.++.+ | + ..+|+-||.+ +..+
T Consensus 93 ~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~-~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~~~ 171 (262)
T 1f6y_A 93 AMINSTNAEREKVEKLFPLAVEHGAALIGLTM-NKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPANVAQD 171 (262)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCEEEEESC-CSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTTCTT
T ss_pred CEEEECCCCcccHHHHHHHHHHhCCcEEEEcC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCCChH
Confidence 9986 43221 345566778877777642 21111124455544445554433 3 3 5799999985 3222
Q ss_pred CcHHHHHHHHHHHHhc
Q 015201 378 TPEEAVAHFFEVGKSM 393 (411)
Q Consensus 378 tp~Eni~a~~~a~~~y 393 (411)
...+.++++-+..+.+
T Consensus 172 ~~~~~l~~l~~l~~~~ 187 (262)
T 1f6y_A 172 HAPEVLKTLQQIKMLA 187 (262)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 2345555554433325
No 68
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=86.00 E-value=1.3 Score=42.54 Aligned_cols=144 Identities=11% Similarity=0.058 Sum_probs=72.8
Q ss_pred HHHHHHHHH-HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHh--hCCCCCEEEEecCCcccHhHHhcCCC
Q 015201 234 TQAIADYII-YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRT--KCPETPIVLYINGNGGFLERMKGTGV 310 (411)
Q Consensus 234 ~d~~~~~~~-~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~--~~~g~~~~~H~CG~~~~l~~~~e~g~ 310 (411)
++..+++++ .+.++|++.|-++ ....||+.|+ +.+++.+.... ..++..+..+.-+ ...++...+.|+
T Consensus 40 ~~~k~~i~~~~L~~~Gv~~IE~g---~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~i~~l~~~-~~~i~~a~~~g~ 110 (337)
T 3ble_A 40 TSEKLNIAKFLLQKLNVDRVEIA---SARVSKGELE-----TVQKIMEWAATEQLTERIEILGFVDG-NKTVDWIKDSGA 110 (337)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEE---ETTSCTTHHH-----HHHHHHHHHHHTTCGGGEEEEEESST-THHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEe---CCCCChhHHH-----HHHHHHhhhhhhccCCCCeEEEEccc-hhhHHHHHHCCC
Confidence 455567777 8888999988553 2233675543 23333332110 1113333333222 225788888999
Q ss_pred cEEEcCC-----------CCCH----------HHHHHHhCCCeeEEccCCcCcc---CCCHHHHHHHHHHHHHHhCCCCe
Q 015201 311 DVIGLDW-----------TVDM----------ADGRKRLGNDISVQGNVDPACL---FSPLPALTDEIQRVVKCAGSRGH 366 (411)
Q Consensus 311 d~l~~d~-----------~~di----------~~~~~~~g~~~~l~G~vd~~~L---~gt~eeV~~ev~~~i~~~~~~gf 366 (411)
+.+.+-. ..+. .+..+..|.+ +.+++.. .. .-+++.+.+.++++.+.+ -.
T Consensus 111 ~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~G---a~ 184 (337)
T 3ble_A 111 KVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLED-WSNGFRNSPDYVKSLVEHLSKEH---IE 184 (337)
T ss_dssp CEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEET-HHHHHHHCHHHHHHHHHHHHTSC---CS
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEE-CCCCCcCCHHHHHHHHHHHHHcC---CC
Confidence 9986421 1121 1122334543 3333221 11 136777777766655543 23
Q ss_pred EEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 367 ILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 367 Ils~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.++...++.. ..|+.+..+++++++.
T Consensus 185 ~i~l~DT~G~-~~P~~v~~lv~~l~~~ 210 (337)
T 3ble_A 185 RIFLPDTLGV-LSPEETFQGVDSLIQK 210 (337)
T ss_dssp EEEEECTTCC-CCHHHHHHHHHHHHHH
T ss_pred EEEEecCCCC-cCHHHHHHHHHHHHHh
Confidence 3444334433 3466688888877764
No 69
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=85.92 E-value=10 Score=35.89 Aligned_cols=145 Identities=16% Similarity=0.141 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g 309 (411)
+..++.++.+++.|||.|-++-.+ +..+|++.=.+-+.|..+.|.+.. ++|+. ++-... .++.-.+.|
T Consensus 33 ~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-----~vpiS--IDT~~~~Va~aAl~aG 105 (314)
T 2vef_A 33 EQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-----DVLIS--IDTWKSQVAEAALAAG 105 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-----CCEEE--EECSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-----CceEE--EeCCCHHHHHHHHHcC
Confidence 445677888999999999887632 225777666666777776665432 55543 343333 467777789
Q ss_pred CcEEE-cCC---CCCHHHHHHHhCCCeeEEcc----CCcC--cc------CC---C-----------HHH-HHHHHHHHH
Q 015201 310 VDVIG-LDW---TVDMADGRKRLGNDISVQGN----VDPA--CL------FS---P-----------LPA-LTDEIQRVV 358 (411)
Q Consensus 310 ~d~l~-~d~---~~di~~~~~~~g~~~~l~G~----vd~~--~L------~g---t-----------~ee-V~~ev~~~i 358 (411)
++++| +.. ..++.++.+++|-.+++|-. .+.. .+ .| | .++ |.+..++.+
T Consensus 106 a~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i 185 (314)
T 2vef_A 106 ADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERAL 185 (314)
T ss_dssp CCEEEETTTTCSCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCChHHHHHHHHcCCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99996 422 24788888888877888732 1111 00 00 1 344 344455544
Q ss_pred HHh---C-C-CCeEEeCCCCCCCCCcHHHHHHHH
Q 015201 359 KCA---G-S-RGHILNLGHGVLVGTPEEAVAHFF 387 (411)
Q Consensus 359 ~~~---~-~-~gfIls~gc~i~~~tp~Eni~a~~ 387 (411)
+.+ | + ...||-||-++... ..+|+..+-
T Consensus 186 ~~a~~~GI~~~~IilDPGiGF~kt-~~~nl~ll~ 218 (314)
T 2vef_A 186 ARAAEAGIAPENILLDPGIGFGLT-KKENLLLLR 218 (314)
T ss_dssp HHHHHHTCCGGGEEEECCTTSSCC-HHHHHHHHH
T ss_pred HHHHHcCCChhhEEEeCCCCcccc-hHHHHHHHH
Confidence 433 3 3 57999999876543 446655553
No 70
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=85.79 E-value=10 Score=36.69 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc--------ccHhHHhcC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG--------GFLERMKGT 308 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~--------~~l~~~~e~ 308 (411)
..+|++.+.++|...|+. ++.+|+.-.+-....++++++.+++. |..+++-+-... ..+..+.++
T Consensus 19 ~~~yi~~a~~~Gf~~IFT-----SL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DIsp~~l~~Lg~s~~dl~~~~~l 91 (372)
T 2p0o_A 19 TIIYIKKMKALGFDGIFT-----SLHIPEDDTSLYRQRLTDLGAIAKAE--KMKIMVDISGEALKRAGFSFDELEPLIEL 91 (372)
T ss_dssp HHHHHHHHHHTTCCEEEE-----EECCC-----CHHHHHHHHHHHHHHH--TCEEEEEECHHHHHTTTCBTTBCHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEc-----cCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 447888899999999853 46777777778889999999999998 666676665431 246788999
Q ss_pred CCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC-C---CCCcHHHHH
Q 015201 309 GVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGV-L---VGTPEEAVA 384 (411)
Q Consensus 309 g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i-~---~~tp~Eni~ 384 (411)
|++++=+|...+..+..+.--+ +.+.=|..+ + |+++ +.++++...+..-+.+. |+. | .|-+.+-+.
T Consensus 92 Gi~glRLD~Gf~~~eia~ls~n-lkIeLNASt--i--~~~~----l~~l~~~~~n~~~l~a~-HNFYPr~~TGLs~~~f~ 161 (372)
T 2p0o_A 92 GVTGLRMDYGITIEQMAHASHK-IDIGLNAST--I--TLEE----VAELKAHQADFSRLEAW-HNYYPRPETGIGTTFFN 161 (372)
T ss_dssp TCCEEEECSSCCHHHHHHHHTT-SEEEEETTT--C--CHHH----HHHHHHTTCCGGGEEEE-CCCCCSTTCSBCHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHhcC-CEEEEECcc--C--CHHH----HHHHHHcCCChHHeEEe-eccCCCCCCCCCHHHHH
Confidence 9999999999999988886443 433322222 1 3443 45556655553334433 555 3 356889999
Q ss_pred HHHHHHHhcCC
Q 015201 385 HFFEVGKSMKY 395 (411)
Q Consensus 385 a~~~a~~~yg~ 395 (411)
..-+..|+||-
T Consensus 162 ~~n~~~k~~Gi 172 (372)
T 2p0o_A 162 EKNRWLKELGL 172 (372)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHCCC
Confidence 99999999983
No 71
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.65 E-value=4.9 Score=39.74 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+--+++++.+.++|++.|-++-+ -.||++|+- ++.+.+.+....+..+.-.+..-++...+.|++.++
T Consensus 61 eeKl~Ia~~L~~~Gv~~IEvG~P---~asp~d~~~---------~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~~V~ 128 (423)
T 3ivs_A 61 EKKIQIAKALDNFGVDYIELTSP---VASEQSRQD---------CEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVD 128 (423)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCT---TSCHHHHHH---------HHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeec---ccCHHHHHH---------HHHHHhcCCCCEEEEeeccChhhHHHHHHcCCCEEE
Confidence 44456778888999999876432 357877643 233333321222333433443346778889999886
Q ss_pred cC----C-------CCCHH----------HHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCC
Q 015201 315 LD----W-------TVDMA----------DGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHG 373 (411)
Q Consensus 315 ~d----~-------~~di~----------~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~ 373 (411)
+- + ..+.. +..+..|.++.+ ... .....+++.+.+-++.+.+.+ ... ++...+
T Consensus 129 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~--~~e-da~r~d~~~~~~v~~~~~~~G-a~~--i~l~DT 202 (423)
T 3ivs_A 129 VVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRF--SSE-DSFRSDLVDLLSLYKAVDKIG-VNR--VGIADT 202 (423)
T ss_dssp EEEEC-------------CHHHHHHHHHHHHHHTTTCEEEE--EEE-SGGGSCHHHHHHHHHHHHHHC-CSE--EEEEET
T ss_pred EEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEE--EEc-cCcCCCHHHHHHHHHHHHHhC-CCc--cccCCc
Confidence 41 1 12221 112224543322 211 113468888877777777653 323 443333
Q ss_pred CCCCCcHHHHHHHHHHHHhc
Q 015201 374 VLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 374 i~~~tp~Eni~a~~~a~~~y 393 (411)
+.. ..|+.+..+++.+++.
T Consensus 203 vG~-~~P~~v~~lv~~l~~~ 221 (423)
T 3ivs_A 203 VGC-ATPRQVYDLIRTLRGV 221 (423)
T ss_dssp TSC-CCHHHHHHHHHHHHHH
T ss_pred cCc-CCHHHHHHHHHHHHhh
Confidence 433 3456688888887764
No 72
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=85.54 E-value=4.5 Score=38.25 Aligned_cols=138 Identities=9% Similarity=0.022 Sum_probs=82.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc----cHhHHh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG----FLERMK 306 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~----~l~~~~ 306 (411)
+...++++.+++.|||.|-+.-.+. .-+|++.=.+ +++.+.+.. ++|+.+--||+.. .++.-.
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~--------vV~~v~~~~-~vplsI~DT~~~~~~~~V~eaal 144 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAE--------VCKAVADAI-DVPLMIIGCGVEEKDAEIFPVIG 144 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHH--------HHHHHHHHC-SSCEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHH--------HHHHHHHhC-CceEEEECCCCCCCCHHHHHHHH
Confidence 4566778888999999998876322 2588876555 344444433 6787665677754 256666
Q ss_pred cCCCc---EEE-cCCC--CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC-C-CCeEEeCCCCCCC-C
Q 015201 307 GTGVD---VIG-LDWT--VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG-S-RGHILNLGHGVLV-G 377 (411)
Q Consensus 307 e~g~d---~l~-~d~~--~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~-~-~gfIls~gc~i~~-~ 377 (411)
+.|.+ .++ +... ..+..+..++|-.+++|..- +.+...+.+.++. ..| + ...|+-||.+... +
T Consensus 145 ~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~-------dv~~l~~~~~~a~-~~Gi~~e~IilDPg~g~~g~~ 216 (310)
T 2h9a_B 145 EALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPL-------DINLSKQLNIMIM-EMNLAPNRIIMDPLIGALGYG 216 (310)
T ss_dssp HHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSS-------CHHHHHHHHHHHH-TTTCCGGGEEEECCCCCTTTT
T ss_pred HhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChh-------HHHHHHHHHHHHH-HCCCChhhEEEeCCCccccCc
Confidence 77877 664 4322 23555567788777776532 2344444444444 333 4 6799999987422 1
Q ss_pred --CcHHHHHHHHHH
Q 015201 378 --TPEEAVAHFFEV 389 (411)
Q Consensus 378 --tp~Eni~a~~~a 389 (411)
-..+|+..+..+
T Consensus 217 ~e~~~~~l~~ir~~ 230 (310)
T 2h9a_B 217 IEYSYSIIERMRLG 230 (310)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHh
Confidence 123445555543
No 73
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.46 E-value=14 Score=34.59 Aligned_cols=125 Identities=17% Similarity=0.140 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
+..+.++...+..++++|++..+++. + ++-.++.++...++|+|
T Consensus 58 Er~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gad 101 (300)
T 3eb2_A 58 QREAVVRATIEAAQRRVPVVAGVAST-----------S-------------------------VADAVAQAKLYEKLGAD 101 (300)
T ss_dssp HHHHHHHHHHHHHTTSSCBEEEEEES-----------S-------------------------HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCCCCcEEEeCCCC-----------C-------------------------HHHHHHHHHHHHHcCCC
Confidence 33455556667777888888766431 0 13335667777889999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-cc------cHhHHhcCCCcEEEc-CCCCCHH
Q 015201 251 CIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-GG------FLERMKGTGVDVIGL-DWTVDMA 322 (411)
Q Consensus 251 ~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~~------~l~~~~e~g~d~l~~-d~~~di~ 322 (411)
++.+.-++-.-.|++ =+.-|++.+.+.. ++|++++.+-. +. .+..+.+.+ +++.+ +...|+.
T Consensus 102 avlv~~P~y~~~~~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~ 171 (300)
T 3eb2_A 102 GILAILEAYFPLKDA----QIESYFRAIADAV-----EIPVVIYTNPQFQRSDLTLDVIARLAEHP-RIRYIKDASTNTG 171 (300)
T ss_dssp EEEEEECCSSCCCHH----HHHHHHHHHHHHC-----SSCEEEEECTTTCSSCCCHHHHHHHHTST-TEEEEEECSSBHH
T ss_pred EEEEcCCCCCCCCHH----HHHHHHHHHHHHC-----CCCEEEEECccccCCCCCHHHHHHHHcCC-CEEEEEcCCCCHH
Confidence 998877755444553 3556888888876 47887777532 21 134445543 55555 3334554
Q ss_pred H---HHHHhCCCeeEEccCCcC
Q 015201 323 D---GRKRLGNDISVQGNVDPA 341 (411)
Q Consensus 323 ~---~~~~~g~~~~l~G~vd~~ 341 (411)
. +.+..+++..+..|-|..
T Consensus 172 ~~~~~~~~~~~~f~v~~G~d~~ 193 (300)
T 3eb2_A 172 RLLSIINRCGDALQVFSASAHI 193 (300)
T ss_dssp HHHHHHHHHGGGSEEEECTTSC
T ss_pred HHHHHHHHcCCCeEEEeCcHHH
Confidence 4 444455555555555543
No 74
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=85.44 E-value=6.7 Score=34.71 Aligned_cols=139 Identities=14% Similarity=0.188 Sum_probs=75.9
Q ss_pred HHHHHHHHhCCCEEEEe-c-CCCCCCCHHHHHHHHH--------------HHHHHHHHHHHhhCCCCCEEEEecCCcc--
Q 015201 239 DYIIYQVESGAHCIQIF-D-SWGGQLPPHMWEQWSE--------------PYIREIVSLVRTKCPETPIVLYINGNGG-- 300 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~-D-~~~~~iSp~~f~ef~~--------------Py~k~i~~~i~~~~~g~~~~~H~CG~~~-- 300 (411)
+-+++..++|+|.+-+- . .+--.++|+.-++... +-..++.+.+.+. +. -+++.+|+..
T Consensus 13 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~--~l-d~vQLHG~e~~~ 89 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYV--QL-NAVQLHGEEPIE 89 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHH--TC-SEEEECSCCCHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhh--CC-CEEEECCCCCHH
Confidence 34556778999987432 2 2333899999888753 2234555556555 22 2566677653
Q ss_pred cHhHHhcCCCcEE---EcCCCCCHHHHHHH----------------------------h---CCCeeEEccCCcCccCCC
Q 015201 301 FLERMKGTGVDVI---GLDWTVDMADGRKR----------------------------L---GNDISVQGNVDPACLFSP 346 (411)
Q Consensus 301 ~l~~~~e~g~d~l---~~d~~~di~~~~~~----------------------------~---g~~~~l~G~vd~~~L~gt 346 (411)
.+..++. ++.+| ++....|+..+.+. + .....+.||+ |
T Consensus 90 ~~~~l~~-~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~~~~~p~~LAGGL-------~ 161 (205)
T 1nsj_A 90 LCRKIAE-RILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGL-------N 161 (205)
T ss_dssp HHHHHHT-TSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGGGGSSCEEEESSC-------C
T ss_pred HHHHHhc-CCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhhcCCCcEEEECCC-------C
Confidence 2343321 22222 23222222221111 0 1123333333 5
Q ss_pred HHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC-CcHHHHHHHHHHHHh
Q 015201 347 LPALTDEIQRVVKCAGSRGHILNLGHGVLVG-TPEEAVAHFFEVGKS 392 (411)
Q Consensus 347 ~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~-tp~Eni~a~~~a~~~ 392 (411)
||.|.+.++ ..++-|.-+++|=...+| -+++.|++|+++++.
T Consensus 162 peNV~~ai~----~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r~ 204 (205)
T 1nsj_A 162 PENVRSAID----VVRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKG 204 (205)
T ss_dssp TTTHHHHHH----HHCCSEEEESGGGEEETTEECHHHHHHHHHHHHT
T ss_pred HHHHHHHHH----hcCCCEEEECCceecCCCCcCHHHHHHHHHHHhh
Confidence 555554443 346678888888776445 588999999999885
No 75
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=85.35 E-value=5.2 Score=36.11 Aligned_cols=127 Identities=17% Similarity=0.152 Sum_probs=72.6
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEE---
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVI--- 313 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l--- 313 (411)
+|++.+.++|||.+.+.-... -+...++++.++++ |....+-.+..+. .++.+.+ ++|.+
T Consensus 71 ~~i~~~~~aGAd~itvh~Ea~------------~~~~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~~l~-~~D~Vlvm 135 (231)
T 3ctl_A 71 DYIAQLARAGADFITLHPETI------------NGQAFRLIDEIRRH--DMKVGLILNPETPVEAMKYYIH-KADKITVM 135 (231)
T ss_dssp GTHHHHHHHTCSEEEECGGGC------------TTTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGG-GCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECcccC------------CccHHHHHHHHHHc--CCeEEEEEECCCcHHHHHHHHh-cCCEEEEe
Confidence 366788899999998752210 12345788899987 5555555544433 3544444 46665
Q ss_pred EcCCC-----C------CHHHHHHHhC-----CCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEe-CCCCCCC
Q 015201 314 GLDWT-----V------DMADGRKRLG-----NDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILN-LGHGVLV 376 (411)
Q Consensus 314 ~~d~~-----~------di~~~~~~~g-----~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls-~gc~i~~ 376 (411)
+++.. . .+.++++... -.+.+-|||++. | ++++++.+ ...+|.+ ++--=.+
T Consensus 136 sV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~----~-------~~~~~~aG-Ad~~V~G~saif~~~ 203 (231)
T 3ctl_A 136 TVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQA----T-------YEKLMAAG-ADVFIVGTSGLFNHA 203 (231)
T ss_dssp SSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTT----T-------HHHHHHHT-CCEEEECTTTTGGGC
T ss_pred eeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHH----H-------HHHHHHcC-CCEEEEccHHHhCCC
Confidence 23221 1 1355665542 246667999873 3 23344443 3477777 4421122
Q ss_pred CCcHHHHHHHHHHHHh
Q 015201 377 GTPEEAVAHFFEVGKS 392 (411)
Q Consensus 377 ~tp~Eni~a~~~a~~~ 392 (411)
+.|.++++.+.+..++
T Consensus 204 d~~~~~~~~l~~~~~~ 219 (231)
T 3ctl_A 204 ENIDEAWRIMTAQILA 219 (231)
T ss_dssp SSHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHHHHHHH
Confidence 3367889988877665
No 76
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=85.29 E-value=4.5 Score=37.97 Aligned_cols=143 Identities=16% Similarity=0.168 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g 309 (411)
+..++.++.+++.|||.|-++-.+ +..+|++.=.+-+.|..+.+.+ . ++|+.+ +-... .++.-.+.|
T Consensus 52 ~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~----~--~vpiSI--DT~~~~Va~aAl~aG 123 (294)
T 2dqw_A 52 ERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLS----L--GVPVSV--DTRKPEVAEEALKLG 123 (294)
T ss_dssp -CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHT----T--CSCEEE--ECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHh----C--CCeEEE--ECCCHHHHHHHHHhC
Confidence 345567788999999999887532 2367777666667777666643 2 466543 33332 456666679
Q ss_pred CcEEE-cCC--CCCHHHHHHHhCCCeeEEccC--CcCcc-----CCCH-HHHHHHHHHHHHHhCC---CCeEEeCCCCCC
Q 015201 310 VDVIG-LDW--TVDMADGRKRLGNDISVQGNV--DPACL-----FSPL-PALTDEIQRVVKCAGS---RGHILNLGHGVL 375 (411)
Q Consensus 310 ~d~l~-~d~--~~di~~~~~~~g~~~~l~G~v--d~~~L-----~gt~-eeV~~ev~~~i~~~~~---~gfIls~gc~i~ 375 (411)
++++| +.. ..++.++.+++|-.+++|-.= .|..+ +.+. +++.+..++.++.+.. ...|+-||-++.
T Consensus 124 a~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~IilDPG~Gf~ 203 (294)
T 2dqw_A 124 AHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQVVLDPGFGFG 203 (294)
T ss_dssp CSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCSCEEEECCTTSS
T ss_pred CCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCCcEEEcCCCCcc
Confidence 99986 322 224666677788777776531 12222 2222 6777777777776532 378999998763
Q ss_pred CCCcHHHHHHH
Q 015201 376 VGTPEEAVAHF 386 (411)
Q Consensus 376 ~~tp~Eni~a~ 386 (411)
.+..+|+..+
T Consensus 204 -kt~~~n~~ll 213 (294)
T 2dqw_A 204 -KLLEHNLALL 213 (294)
T ss_dssp -CCHHHHHHHH
T ss_pred -cCHHHHHHHH
Confidence 3445665543
No 77
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=85.24 E-value=24 Score=32.92 Aligned_cols=108 Identities=20% Similarity=0.273 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 72 ~~v~~~~~~~~~grvpviaGvg~~-----------s-------------------------t~~ai~la~~A~~~Gadav 115 (304)
T 3cpr_A 72 LELLKAVREEVGDRAKLIAGVGTN-----------N-------------------------TRTSVELAEAAASAGADGL 115 (304)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCS-----------C-------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEecCCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 344555566677789988776441 0 2334566777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|+ +=+.-|++.+.+.. ++|++++.. |.. . .+..+.+.+ +++.+ +..-|+...
T Consensus 116 lv~~P~y~~~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~~~ 185 (304)
T 3cpr_A 116 LVVTPYYSKPSQ----EGLLAHFGAIAAAT-----EVPICLYDIPGRSGIPIESDTMRRLSELP-TILAVXDAKGDLVAA 185 (304)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSSCCCHHHHHHHTTST-TEEEEEECSCCHHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHcCC-CEEEEecCCCCHHHH
Confidence 887765433453 55677888888765 478877764 432 2 234455543 56555 444466555
Q ss_pred HH
Q 015201 325 RK 326 (411)
Q Consensus 325 ~~ 326 (411)
.+
T Consensus 186 ~~ 187 (304)
T 3cpr_A 186 TS 187 (304)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 78
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.11 E-value=10 Score=36.23 Aligned_cols=145 Identities=11% Similarity=0.089 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecC--CC------CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE-ecC--CcccH
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDS--WG------GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY-ING--NGGFL 302 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~--~~------~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H-~CG--~~~~l 302 (411)
++..+++++++.++|+|.|-++-. |. ++-..+.|+ .++++. +..++.++... .-| ....+
T Consensus 29 ~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e-----~l~~i~----~~~~~~~i~~l~~p~~~~~~~i 99 (345)
T 1nvm_A 29 LDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLE-----YIEAVA----GEISHAQIATLLLPGIGSVHDL 99 (345)
T ss_dssp HHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHH-----HHHHHH----TTCSSSEEEEEECBTTBCHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHH-----HHHHHH----hhCCCCEEEEEecCCcccHHHH
Confidence 355667788888899999877411 21 221222222 233333 33346666655 222 22357
Q ss_pred hHHhcCCCcEEEcC-CCC------CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 303 ERMKGTGVDVIGLD-WTV------DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 303 ~~~~e~g~d~l~~d-~~~------di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
+...+.|++.+.+- ... +..+..+..|- .+.+.+... ..-++|.+.+-++++.+.+ -++++...++.
T Consensus 100 ~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~--~v~~~~~~a-~~~~~e~~~~ia~~~~~~G---a~~i~l~DT~G 173 (345)
T 1nvm_A 100 KNAYQAGARVVRVATHCTEADVSKQHIEYARNLGM--DTVGFLMMS-HMIPAEKLAEQGKLMESYG---ATCIYMADSGG 173 (345)
T ss_dssp HHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTC--EEEEEEEST-TSSCHHHHHHHHHHHHHHT---CSEEEEECTTC
T ss_pred HHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCC--EEEEEEEeC-CCCCHHHHHHHHHHHHHCC---CCEEEECCCcC
Confidence 88888999998642 111 22333344563 344443111 2357788877777776653 45666554444
Q ss_pred CCCcHHHHHHHHHHHHhcC
Q 015201 376 VGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 376 ~~tp~Eni~a~~~a~~~yg 394 (411)
..+ |+.+..+++++++.-
T Consensus 174 ~~~-P~~v~~lv~~l~~~~ 191 (345)
T 1nvm_A 174 AMS-MNDIRDRMRAFKAVL 191 (345)
T ss_dssp CCC-HHHHHHHHHHHHHHS
T ss_pred ccC-HHHHHHHHHHHHHhc
Confidence 334 778999999988764
No 79
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=84.97 E-value=24 Score=32.65 Aligned_cols=120 Identities=12% Similarity=0.165 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 56 ~~v~~~~~~~~~gr~pviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 99 (289)
T 2yxg_A 56 KKVIEKVVDVVNGRVQVIAGAGSN-----------C-------------------------TEEAIELSVFAEDVGADAV 99 (289)
T ss_dssp HHHHHHHHHHHTTSSEEEEECCCS-----------S-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 344555666677789998776441 0 1333566777888999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHh-cCCCcEEEc-CCCCCHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMK-GTGVDVIGL-DWTVDMAD 323 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~-e~g~d~l~~-d~~~di~~ 323 (411)
.+.-++-.-.|. +-+.-|++++.+.. ++|++++.. |. .. .+..+. +.+ ++..+ +..-|+..
T Consensus 100 lv~~P~y~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nivgiK~s~gd~~~ 169 (289)
T 2yxg_A 100 LSITPYYNKPTQ----EGLRKHFGKVAESI-----NLPIVLYNVPSRTAVNLEPKTVKLLAEEYS-NISAVKEANPNLSQ 169 (289)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECCSCTHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHHhCC-CEEEEEeCCCCHHH
Confidence 887765443454 45666778888765 478888774 32 22 244455 543 55555 33345444
Q ss_pred H---HHHhCCCeeEEccCCc
Q 015201 324 G---RKRLGNDISVQGNVDP 340 (411)
Q Consensus 324 ~---~~~~g~~~~l~G~vd~ 340 (411)
. .+.. +..+..|-|.
T Consensus 170 ~~~~~~~~--~f~v~~G~d~ 187 (289)
T 2yxg_A 170 VSELIHDA--KITVLSGNDE 187 (289)
T ss_dssp HHHHHHHT--CSEEEESCGG
T ss_pred HHHHHHhC--CeEEEECcHH
Confidence 3 4433 3444444443
No 80
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=84.73 E-value=16 Score=34.31 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHh-cC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMK-GT 308 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~-e~ 308 (411)
.++.++...++|+|++.+.-++-.-.|+ +=+.-|++++.+.. ++|++++.. |. .. .+..+. +.
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~ 166 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVTPYYNKPTQ----EGLYQHYKYISERT-----DLGIVVYNVPGRTGVNVLPETAARIAADL 166 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSCCCH----HHHHHHHHHHHTTC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCccccCcCCCHHHHHHHHHhC
Confidence 4567777888999999887765443454 44566777777654 578888774 42 22 244455 54
Q ss_pred CCcEEEc-CCCCCHHHHH---HHhCC---CeeEEccCCc
Q 015201 309 GVDVIGL-DWTVDMADGR---KRLGN---DISVQGNVDP 340 (411)
Q Consensus 309 g~d~l~~-d~~~di~~~~---~~~g~---~~~l~G~vd~ 340 (411)
+ ++..+ +..-|+.... +..++ +..+..|-|.
T Consensus 167 p-nIvgiKdssgd~~~~~~~~~~~~~~~~~f~v~~G~d~ 204 (306)
T 1o5k_A 167 K-NVVGIXEANPDIDQIDRTVSLTKQARSDFMVWSGNDD 204 (306)
T ss_dssp T-TEEEEEECCCCHHHHHHHHHHHHHHCTTCEEEESSGG
T ss_pred C-CEEEEeCCCCCHHHHHHHHHhcCCCCCcEEEEECcHH
Confidence 3 56555 3444655543 33443 4555555554
No 81
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=84.73 E-value=2.4 Score=40.05 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-h--HHhcCCCc
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-E--RMKGTGVD 311 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~--~~~e~g~d 311 (411)
++.+.++.+.++|+|.|.+.|..| .+.|+.+.++ ++.+++..|++++-+|.+.+... + . .-.+.|++
T Consensus 158 ~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~v~~l--------v~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~ 228 (307)
T 1ydo_A 158 QVIRLSEALFEFGISELSLGDTIG-AANPAQVETV--------LEALLARFPANQIALHFHDTRGTALANMVTALQMGIT 228 (307)
T ss_dssp HHHHHHHHHHHHTCSCEEEECSSC-CCCHHHHHHH--------HHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCC-CcCHHHHHHH--------HHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 444555667788999999988766 4788887664 44555544457889998766542 2 2 23357999
Q ss_pred EEEc
Q 015201 312 VIGL 315 (411)
Q Consensus 312 ~l~~ 315 (411)
.+..
T Consensus 229 ~vd~ 232 (307)
T 1ydo_A 229 VFDG 232 (307)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8853
No 82
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=84.69 E-value=14 Score=33.06 Aligned_cols=139 Identities=13% Similarity=0.114 Sum_probs=77.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIG 314 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~ 314 (411)
.+.++.+.++|+|.+.+.|..+.... .+..-+++..+++.. ++|+++ .|.+. .++.+.+.|+|.+.
T Consensus 34 ~~~a~~~~~~Gad~i~v~d~~~~~~~--------~~~~~~~i~~i~~~~-~iPvi~--~Ggi~~~~~~~~~~~~Gad~V~ 102 (252)
T 1ka9_F 34 VEAARAYDEAGADELVFLDISATHEE--------RAILLDVVARVAERV-FIPLTV--GGGVRSLEDARKLLLSGADKVS 102 (252)
T ss_dssp HHHHHHHHHHTCSCEEEEECCSSTTC--------HHHHHHHHHHHHTTC-CSCEEE--ESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEEcCCccccC--------ccccHHHHHHHHHhC-CCCEEE--ECCcCCHHHHHHHHHcCCCEEE
Confidence 35667778899999999886654322 122334455565553 678654 34443 46778888999998
Q ss_pred cCC-----CCCHHHHHHHhCCC-eeEEccCCcC------c--cCC-C---HHHHHHHHHHHHHHhCCCCeEEeC-C-CCC
Q 015201 315 LDW-----TVDMADGRKRLGND-ISVQGNVDPA------C--LFS-P---LPALTDEIQRVVKCAGSRGHILNL-G-HGV 374 (411)
Q Consensus 315 ~d~-----~~di~~~~~~~g~~-~~l~G~vd~~------~--L~g-t---~eeV~~ev~~~i~~~~~~gfIls~-g-c~i 374 (411)
+.. ...+.++.+.++.+ +.+. +|.. . ..| . .....+.++++.+. +-+++++.. + .+.
T Consensus 103 lg~~~l~~p~~~~~~~~~~~~~~i~~~--~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~ 179 (252)
T 1ka9_F 103 VNSAAVRRPELIRELADHFGAQAVVLA--IDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL-GAGEILLTSMDRDGT 179 (252)
T ss_dssp ECHHHHHCTHHHHHHHHHHCGGGEEEE--EEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH-TCCEEEEEETTTTTT
T ss_pred EChHHHhCcHHHHHHHHHcCCCcEEEE--EEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc-CCCEEEEecccCCCC
Confidence 743 11267778888743 3332 3331 1 122 1 12334445555443 445666653 2 123
Q ss_pred CCCCcHHHHHHHHHHH
Q 015201 375 LVGTPEEAVAHFFEVG 390 (411)
Q Consensus 375 ~~~tp~Eni~a~~~a~ 390 (411)
..+.+.+.++.+.+.+
T Consensus 180 ~~g~~~~~i~~l~~~~ 195 (252)
T 1ka9_F 180 KEGYDLRLTRMVAEAV 195 (252)
T ss_dssp CSCCCHHHHHHHHHHC
T ss_pred cCCCCHHHHHHHHHHc
Confidence 3455677777766543
No 83
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=84.49 E-value=5 Score=40.23 Aligned_cols=70 Identities=24% Similarity=0.263 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-hH--HhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-ER--MKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~~--~~e~g~ 310 (411)
++.++.++.+.++|+|.|.+.|..|. +.|....+. ++.+++.. ++++-+|.+.+... + .. -.+.|+
T Consensus 158 e~~~~~a~~l~~~Gad~I~l~DT~G~-~~P~~v~~l--------v~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa 227 (464)
T 2nx9_A 158 QTWVDVAQQLAELGVDSIALKDMAGI-LTPYAAEEL--------VSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGV 227 (464)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTSC-CCHHHHHHH--------HHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCCC-cCHHHHHHH--------HHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCC
Confidence 34555666777899999999887766 678776654 44444443 57899999877652 3 33 346899
Q ss_pred cEEE
Q 015201 311 DVIG 314 (411)
Q Consensus 311 d~l~ 314 (411)
+.+.
T Consensus 228 ~~VD 231 (464)
T 2nx9_A 228 DRVD 231 (464)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9984
No 84
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=84.41 E-value=10 Score=33.75 Aligned_cols=127 Identities=13% Similarity=0.149 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcC--CCcEEE
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGT--GVDVIG 314 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~--g~d~l~ 314 (411)
++++.+.++|+|++++++..... . +.+.++.+++. |..+++.....+. .+..+.+. ++|.+-
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~~-~-----------~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl 143 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSRD-N-----------WQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVL 143 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCTT-T-----------HHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEE
T ss_pred HHHHHHHHcCCCEEEECCCCccc-H-----------HHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEE
Confidence 45667778899999888654320 0 03456667766 5666655533332 45566665 778774
Q ss_pred cC--------CCC------CHHHHHHHh-CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCc
Q 015201 315 LD--------WTV------DMADGRKRL-GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTP 379 (411)
Q Consensus 315 ~d--------~~~------di~~~~~~~-g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp 379 (411)
+. ... .+.++++.. +-.+.+.|||++. +..++ ++. +--++|.++.--=.++ |
T Consensus 144 ~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~----ni~~~-------~~a-GaD~vvvGsai~~~~d-~ 210 (228)
T 1h1y_A 144 VMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS----TIDVA-------ASA-GANCIVAGSSIFGAAE-P 210 (228)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTT----THHHH-------HHH-TCCEEEESHHHHTSSC-H
T ss_pred EEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHH----HHHHH-------HHc-CCCEEEECHHHHCCCC-H
Confidence 31 111 145556655 3346778999883 33333 222 3346777655211223 6
Q ss_pred HHHHHHHHHHHHh
Q 015201 380 EEAVAHFFEVGKS 392 (411)
Q Consensus 380 ~Eni~a~~~a~~~ 392 (411)
.++++.+.+..++
T Consensus 211 ~~~~~~l~~~~~~ 223 (228)
T 1h1y_A 211 GEVISALRKSVEG 223 (228)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888776664
No 85
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.32 E-value=11 Score=34.79 Aligned_cols=147 Identities=18% Similarity=0.226 Sum_probs=74.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHH---------HHHHHHHHHHHHhhCCCCCEEEEecCCc------c
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWS---------EPYIREIVSLVRTKCPETPIVLYINGNG------G 300 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~---------~Py~k~i~~~i~~~~~g~~~~~H~CG~~------~ 300 (411)
..+.++.+.++|+|.|-+.-++.. +..-....+-. ..-.-++++.+++...++|+++-.--|. .
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 567778889999999987755442 33322222222 1122344555665423678766533221 2
Q ss_pred -cHhHHhcCCCcEEEc-CCC----CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeC-CCC
Q 015201 301 -FLERMKGTGVDVIGL-DWT----VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNL-GHG 373 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~-d~~----~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~-gc~ 373 (411)
+++.+++.|+|++-+ |-. .++.+..+++|=+..+ -+.| .|++ +..+++.+.. .|||... -.+
T Consensus 114 ~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~--liaP----~t~~---eri~~i~~~~--~gfvY~vS~~G 182 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIF--IAPP----NADA---DTLKMVSEQG--EGYTYLLSRAG 182 (267)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEC--EECT----TCCH---HHHHHHHHHC--CSCEEESCCCC
T ss_pred HHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEE--EECC----CCCH---HHHHHHHHhC--CCcEEEEecCC
Confidence 467788899999754 322 2344444455522111 1122 2333 2344444443 3676662 222
Q ss_pred CCCC-C-cHHHHHHHHHHHHhcC
Q 015201 374 VLVG-T-PEEAVAHFFEVGKSMK 394 (411)
Q Consensus 374 i~~~-t-p~Eni~a~~~a~~~yg 394 (411)
+... . -++.+..+++.+|++.
T Consensus 183 vTG~~~~~~~~~~~~v~~vr~~~ 205 (267)
T 3vnd_A 183 VTGTESKAGEPIENILTQLAEFN 205 (267)
T ss_dssp CC--------CHHHHHHHHHTTT
T ss_pred CCCCccCCcHHHHHHHHHHHHhc
Confidence 2211 1 2355778888888875
No 86
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=84.31 E-value=7.7 Score=36.65 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cH---hHHhcCC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FL---ERMKGTG 309 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l---~~~~e~g 309 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+.. .+|++.++..++. -+ ....+.|
T Consensus 34 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~----~~v~~~~g---rvpViaGvg~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 34 HYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVR----RTVEYVHG---RALVVAGIGYATSTAIELGNAAKAAG 106 (316)
T ss_dssp HHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHH----HHHHHhCC---CCcEEEEeCcCHHHHHHHHHHHHhcC
Confidence 3445566778899999987776664 799998877653 33444432 5789988854332 23 4455679
Q ss_pred CcEEEc
Q 015201 310 VDVIGL 315 (411)
Q Consensus 310 ~d~l~~ 315 (411)
+|++.+
T Consensus 107 adavlv 112 (316)
T 3e96_A 107 ADAVMI 112 (316)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998753
No 87
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=84.29 E-value=5.3 Score=38.78 Aligned_cols=83 Identities=17% Similarity=0.133 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC---CCEEEEecCCccc-H-hHH--hc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPE---TPIVLYINGNGGF-L-ERM--KG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g---~~~~~H~CG~~~~-l-~~~--~e 307 (411)
+++.+.++++.++|++.|.+.|..|. ..|..+.+++ +.+++..|+ .++-+|.+.+... + ..+ .+
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~~~~~lv--------~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~ 227 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVGY-SIPYKTEEFF--------RELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALK 227 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSSC-CCHHHHHHHH--------HHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCccCC-cCHHHHHHHH--------HHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHH
Confidence 45556667778889999988887765 7788776653 344443333 6788999887652 3 333 36
Q ss_pred CCCcEEEc-----CC---CCCHHHHHH
Q 015201 308 TGVDVIGL-----DW---TVDMADGRK 326 (411)
Q Consensus 308 ~g~d~l~~-----d~---~~di~~~~~ 326 (411)
.|++.+.. .. ..++.++.-
T Consensus 228 aGa~~vd~tv~GlGeraGN~~lE~vv~ 254 (370)
T 3rmj_A 228 GGARQVECTVNGLGERAGNASVEEIVM 254 (370)
T ss_dssp TTCCEEEEBGGGCSSTTCBCBHHHHHH
T ss_pred hCCCEEEEeccccCcccccccHHHHHH
Confidence 79999853 22 346666543
No 88
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.26 E-value=3.2 Score=38.78 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=44.8
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H---hHHhcCCCcEEE
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L---ERMKGTGVDVIG 314 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l---~~~~e~g~d~l~ 314 (411)
++++.+.++|+|.|.+.|..| .++|+.+.++ ++.+++..+++|+.+|..-+... + -.-.+.|++.++
T Consensus 159 ~~~~~~~~~G~d~i~l~Dt~G-~~~P~~~~~l--------v~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 159 SVTEQLFSLGCHEVSLGDTIG-RGTPDTVAAM--------LDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp HHHHHHHHHTCSEEEEEETTS-CCCHHHHHHH--------HHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHhcCCCEEEecCCCC-CcCHHHHHHH--------HHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEE
Confidence 444566678999999998655 4789886654 44555544346789998655432 2 223457888876
Q ss_pred c
Q 015201 315 L 315 (411)
Q Consensus 315 ~ 315 (411)
.
T Consensus 230 ~ 230 (295)
T 1ydn_A 230 A 230 (295)
T ss_dssp E
T ss_pred e
Confidence 5
No 89
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=84.10 E-value=6.9 Score=35.69 Aligned_cols=125 Identities=14% Similarity=0.186 Sum_probs=71.4
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEE---
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVI--- 313 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l--- 313 (411)
+|++.+.++|+|.+.+...... ...+.++.++++ |....+=....+. .++.+.+ .+|.+
T Consensus 100 ~~i~~~~~aGAd~itvH~Ea~~-------------~~~~~i~~ir~~--G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvM 163 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPEASE-------------HIDRSLQLIKSF--GIQAGLALNPATGIDCLKYVES-NIDRVLIM 163 (246)
T ss_dssp HHHHHHHHHTCSEEEECGGGCS-------------CHHHHHHHHHTT--TSEEEEEECTTCCSGGGTTTGG-GCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEccccch-------------hHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHh-cCCEEEEe
Confidence 4667788999999988643321 245778888887 5555555655543 4555554 35554
Q ss_pred EcCCC--------C---CHHHHHHHhC-----CCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC
Q 015201 314 GLDWT--------V---DMADGRKRLG-----NDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVG 377 (411)
Q Consensus 314 ~~d~~--------~---di~~~~~~~g-----~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~ 377 (411)
+++.. . .+.++++..+ -.+.+-|||++. | ++++++.+ ...+|.++.- +..+
T Consensus 164 sV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~----t-------i~~~~~aG-AD~~V~GSaI-f~a~ 230 (246)
T 3inp_A 164 SVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY----N-------IAEIAVCG-VNAFVAGSAI-FNSD 230 (246)
T ss_dssp CSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTT----T-------HHHHHTTT-CCEEEESHHH-HTSS
T ss_pred eecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHH----H-------HHHHHHcC-CCEEEEehHH-hCCC
Confidence 23211 1 1445555442 236778999874 2 33444433 3466666431 1223
Q ss_pred CcHHHHHHHHHHHHh
Q 015201 378 TPEEAVAHFFEVGKS 392 (411)
Q Consensus 378 tp~Eni~a~~~a~~~ 392 (411)
-|.++++.+.+...+
T Consensus 231 dp~~~i~~l~~~i~~ 245 (246)
T 3inp_A 231 SYKQTIDKMRDELNK 245 (246)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhh
Confidence 356788888777654
No 90
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=83.88 E-value=4.4 Score=41.36 Aligned_cols=71 Identities=20% Similarity=0.183 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCccc-H---hHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGGF-L---ERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~~-l---~~~~e~g 309 (411)
++.++.++++.++|+|.|.+.|..|. +.|..+.+++ +.+++..| ++++-+|.+.+... + -.-.+.|
T Consensus 175 e~~~~~a~~l~~~Gad~I~L~DT~G~-~~P~~v~~lv--------~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAG 245 (539)
T 1rqb_A 175 EGYVKLAGQLLDMGADSIALKDMAAL-LKPQPAYDII--------KAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAG 245 (539)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCC-CCHHHHHHHH--------HHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCCC-cCHHHHHHHH--------HHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhC
Confidence 34555666777889999988887665 7787776654 33333323 57899999877652 3 2334689
Q ss_pred CcEEE
Q 015201 310 VDVIG 314 (411)
Q Consensus 310 ~d~l~ 314 (411)
++.+.
T Consensus 246 a~~VD 250 (539)
T 1rqb_A 246 VDVVD 250 (539)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 99984
No 91
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=83.77 E-value=4.3 Score=36.47 Aligned_cols=63 Identities=13% Similarity=0.202 Sum_probs=40.2
Q ss_pred HHHHHHHHhCCCEEEEecCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe----c--CCcc-cHhHHhcCCC
Q 015201 239 DYIIYQVESGAHCIQIFDSW-GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI----N--GNGG-FLERMKGTGV 310 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~-~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~----C--G~~~-~l~~~~e~g~ 310 (411)
+-++.+.++|+|+|.++--. .+-+. .+..+++++.++ +.++.+|- | -+.. -++.++++|+
T Consensus 80 ~Di~~~~~~GadGvV~G~Lt~dg~iD--------~~~~~~Li~~a~----~~~vTFHRAFD~~~~~d~~~ale~L~~lGv 147 (224)
T 2bdq_A 80 EDILRAVELESDALVLGILTSNNHID--------TEAIEQLLPATQ----GLPLVFHMAFDVIPKSDQKKSIDQLVALGF 147 (224)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSSBC--------HHHHHHHHHHHT----TCCEEECGGGGGSCTTTHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEeeECCCCCcC--------HHHHHHHHHHhC----CCeEEEECchhccCCcCHHHHHHHHHHcCC
Confidence 34556778999999765321 12344 355677777775 56888886 3 2222 3677888887
Q ss_pred cEE
Q 015201 311 DVI 313 (411)
Q Consensus 311 d~l 313 (411)
+.+
T Consensus 148 ~rI 150 (224)
T 2bdq_A 148 TRI 150 (224)
T ss_dssp CEE
T ss_pred CEE
Confidence 775
No 92
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=83.66 E-value=23 Score=32.89 Aligned_cols=123 Identities=16% Similarity=0.168 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 56 ~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gadav 99 (294)
T 2ehh_A 56 EKVIEFAVKRAAGRIKVIAGTGGN-----------A-------------------------THEAVHLTAHAKEVGADGA 99 (294)
T ss_dssp HHHHHHHHHHHTTSSEEEEECCCS-----------C-------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 345555666677789988776441 0 1333566777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHh-cCCCcEEEc-CCCCCHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMK-GTGVDVIGL-DWTVDMAD 323 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~-e~g~d~l~~-d~~~di~~ 323 (411)
.+.-++-.-.|+ +-+.-|++.+.+.. ++|++++.. |. .. .+..+. +.+ +++.+ +...|+..
T Consensus 100 lv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nivgiKds~gd~~~ 169 (294)
T 2ehh_A 100 LVVVPYYNKPTQ----RGLYEHFKTVAQEV-----DIPIIIYNIPSRTCVEISVDTMFKLASECE-NIVASKESTPNMDR 169 (294)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECCSCHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCCcccCcCCCHHHHHHHHhhCC-CEEEEEeCCCCHHH
Confidence 877665433454 44566777887765 478877774 42 22 244455 543 55554 33345544
Q ss_pred ---HHHHhCCCeeEEccCCcC
Q 015201 324 ---GRKRLGNDISVQGNVDPA 341 (411)
Q Consensus 324 ---~~~~~g~~~~l~G~vd~~ 341 (411)
+.+..+++..++.|-|..
T Consensus 170 ~~~~~~~~~~~f~v~~G~d~~ 190 (294)
T 2ehh_A 170 ISEIVKRLGESFSVLSGDDSL 190 (294)
T ss_dssp HHHHHHHHCTTSEEEESSGGG
T ss_pred HHHHHHhcCCCeEEEECcHHH
Confidence 444456566666555543
No 93
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=83.57 E-value=12 Score=34.89 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=50.3
Q ss_pred HHHHHHHHHHH-hCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhc
Q 015201 236 AIADYIIYQVE-SGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKG 307 (411)
Q Consensus 236 ~~~~~~~~~~e-~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e 307 (411)
.+.++++.+++ .|+|++.+....|. .+|.++.++++. ...+.+.. .+|++.+..++.. -+ ....+
T Consensus 25 ~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~ 97 (293)
T 1f6k_A 25 GLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFR----IAKDEAKD---QIALIAQVGSVNLKEAVELGKYATE 97 (293)
T ss_dssp HHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHh
Confidence 34456667888 99999988877774 799998877653 33344432 5788888877543 23 44556
Q ss_pred CCCcEEEc
Q 015201 308 TGVDVIGL 315 (411)
Q Consensus 308 ~g~d~l~~ 315 (411)
.|+|++.+
T Consensus 98 ~Gadavlv 105 (293)
T 1f6k_A 98 LGYDCLSA 105 (293)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999743
No 94
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=83.45 E-value=13 Score=34.23 Aligned_cols=98 Identities=23% Similarity=0.232 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEec--CCcc--cHhHHhcCCCc----EE-EcCCCCCHHHHHHHh--CCCeeEEccCCc
Q 015201 272 EPYIREIVSLVRTKCPETPIVLYIN--GNGG--FLERMKGTGVD----VI-GLDWTVDMADGRKRL--GNDISVQGNVDP 340 (411)
Q Consensus 272 ~Py~k~i~~~i~~~~~g~~~~~H~C--G~~~--~l~~~~e~g~d----~l-~~d~~~di~~~~~~~--g~~~~l~G~vd~ 340 (411)
...+++.++..++. |.|+++|+. |... .++.+.+.|+. ++ |+....+...+++.. |-.+.+-| ...
T Consensus 150 ~~~~~~~~~lA~~~--~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~-~~~ 226 (314)
T 2vc7_A 150 EKVIRAAAIANKET--KVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDR-YGL 226 (314)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECC-TTC
T ss_pred HHHHHHHHHHHHHH--CCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeC-CCc
Confidence 34556667777776 789999984 3432 46777777764 22 443334566666543 54344432 111
Q ss_pred CccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCC
Q 015201 341 ACLFSPLPALTDEIQRVVKCAGSRGHILNLGHG 373 (411)
Q Consensus 341 ~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~ 373 (411)
.-+.+.++..+.++++++.+....+++++++.
T Consensus 227 -~~~~~~~~~~~~i~~~~~~g~~drilleTD~~ 258 (314)
T 2vc7_A 227 -DLFLPVDKRNETTLRLIKDGYSDKIMISHDYC 258 (314)
T ss_dssp -TTTSCHHHHHHHHHHHHHTTCTTTEEECCCCB
T ss_pred -ccCCCHHHHHHHHHHHHHcCCCCeEEEcCCcc
Confidence 11346677888888888865447899999984
No 95
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=83.28 E-value=9.4 Score=35.57 Aligned_cols=74 Identities=19% Similarity=0.268 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e 307 (411)
+.+.++++.+++.|+|++.+....|. .+|.++.++.+. .+.+.+.. .+|++.++.++.. -+ ....+
T Consensus 21 ~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 21 VALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVE----ITIKTANG---RVPVIAGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHH
Confidence 34456667888999999987777664 799998877543 33344432 4789988877543 23 44567
Q ss_pred CCCcEEEc
Q 015201 308 TGVDVIGL 315 (411)
Q Consensus 308 ~g~d~l~~ 315 (411)
.|+|++.+
T Consensus 94 ~Gadavlv 101 (292)
T 2vc6_A 94 AGADGVLI 101 (292)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999743
No 96
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=83.25 E-value=10 Score=35.51 Aligned_cols=73 Identities=19% Similarity=0.253 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+.. .+|++.|+.++.. -+ ....+.
T Consensus 29 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 29 QLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIE----AVVKHVAK---RVPVIAGTGANNTVEAIALSQAAEKA 101 (297)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 3445566778899999988877774 799998877653 33344432 5789998876543 23 556678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 102 Gadavlv 108 (297)
T 3flu_A 102 GADYTLS 108 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 97
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=83.23 E-value=8.1 Score=35.77 Aligned_cols=147 Identities=18% Similarity=0.282 Sum_probs=75.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCC----CC--CCCHHHHHHH----HHHHHHHHHHHHHhhCCCCCEEEEecCC-------c
Q 015201 237 IADYIIYQVESGAHCIQIFDSW----GG--QLPPHMWEQW----SEPYIREIVSLVRTKCPETPIVLYINGN-------G 299 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~----~~--~iSp~~f~ef----~~Py~k~i~~~i~~~~~g~~~~~H~CG~-------~ 299 (411)
..+.++.+.++|+|.|-++-++ +. .|-...-+-+ -..-.-++++.+++....+|+++..--| .
T Consensus 36 ~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 5677888999999998776443 32 2222111111 0112224555666543368887754222 1
Q ss_pred ccHhHHhcCCCcEEEc-CC----CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCC-CC
Q 015201 300 GFLERMKGTGVDVIGL-DW----TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLG-HG 373 (411)
Q Consensus 300 ~~l~~~~e~g~d~l~~-d~----~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~g-c~ 373 (411)
.+++...+.|+|++-+ |- ..++.+..+++|-+.++. +.| -|++ +..+++.+.. .|||...+ .+
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l--vap----~t~~---eri~~i~~~~--~gfiY~vs~~G 184 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI--APP----TASD---ETLRAVAQLG--KGYTYLLSRAG 184 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE--ECT----TCCH---HHHHHHHHHC--CSCEEECCCC-
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE--ECC----CCCH---HHHHHHHHHC--CCeEEEEeccC
Confidence 2457778899999643 32 223445555566332221 122 2222 2344444442 47776522 12
Q ss_pred C---CCCCcHHHHHHHHHHHHhcCC
Q 015201 374 V---LVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 374 i---~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+ ....+ +.+..+++.+|++..
T Consensus 185 vTG~~~~~~-~~~~~~v~~vr~~~~ 208 (271)
T 3nav_A 185 VTGAETKAN-MPVHALLERLQQFDA 208 (271)
T ss_dssp -------CC-HHHHHHHHHHHHTTC
T ss_pred CCCcccCCc-hhHHHHHHHHHHhcC
Confidence 2 22233 568888888888753
No 98
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.10 E-value=6.6 Score=36.73 Aligned_cols=71 Identities=15% Similarity=0.189 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC---CCEEEEecCCccc-H-hH--Hhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPE---TPIVLYINGNGGF-L-ER--MKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g---~~~~~H~CG~~~~-l-~~--~~e 307 (411)
+++.+.++.+.++|++.|.+.|..|. +.|..+.++ ++.+++..|+ +++-+|.+.+... + .. -.+
T Consensus 150 ~~~~~~~~~~~~~G~~~i~l~DT~G~-~~P~~v~~l--------v~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~ 220 (293)
T 3ewb_X 150 AFLIEAVQTAIDAGATVINIPDTVGY-TNPTEFGQL--------FQDLRREIKQFDDIIFASHCHDDLGMATANALAAIE 220 (293)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSSSC-CCHHHHHHH--------HHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCCC-CCHHHHHHH--------HHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHH
Confidence 34556666778889999988887765 888877664 3444444332 5688999887652 3 33 346
Q ss_pred CCCcEEE
Q 015201 308 TGVDVIG 314 (411)
Q Consensus 308 ~g~d~l~ 314 (411)
.|++.+.
T Consensus 221 aGa~~vd 227 (293)
T 3ewb_X 221 NGARRVE 227 (293)
T ss_dssp TTCCEEE
T ss_pred hCCCEEE
Confidence 8999884
No 99
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=83.06 E-value=10 Score=35.32 Aligned_cols=73 Identities=21% Similarity=0.311 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++.+. ..++.+. +.+|++.|..++.. -+ ....+.
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIK----EIIRVAN---KRIPIIAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHH----HHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 3445566788899999988877774 799988866543 3334443 25789998877643 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 96 Gadavlv 102 (291)
T 3tak_A 96 GADAALL 102 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999753
No 100
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=83.03 E-value=3.4 Score=37.93 Aligned_cols=90 Identities=10% Similarity=-0.008 Sum_probs=55.0
Q ss_pred HHHHHHHHhCCCEEEEecCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe----cCCcc-cHhHHhcCCCcE
Q 015201 239 DYIIYQVESGAHCIQIFDSW-GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI----NGNGG-FLERMKGTGVDV 312 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~-~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~----CG~~~-~l~~~~e~g~d~ 312 (411)
+-++.+.++|+|+|.++--. .+-+. .+..+++++.++ +.++.+|- |-+.. -++.++++|++.
T Consensus 77 ~Di~~~~~~GadGvV~G~Lt~dg~iD--------~~~~~~Li~~a~----~~~vTFHRAfD~~~d~~~ale~L~~lG~~r 144 (256)
T 1twd_A 77 EDVRTVRELGFPGLVTGVLDVDGNVD--------MPRMEKIMAAAG----PLAVTFHRAFDMCANPLYTLNNLAELGIAR 144 (256)
T ss_dssp HHHHHHHHTTCSEEEECCBCTTSSBC--------HHHHHHHHHHHT----TSEEEECGGGGGCSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHcCCCEEEEeeECCCCCcC--------HHHHHHHHHHhC----CCcEEEECchhccCCHHHHHHHHHHcCCCE
Confidence 34567788999999765311 12344 355677777775 56889996 33333 489999999998
Q ss_pred EEcC----C-CCCHHHHHHH---hCCCeeEE--ccCCcC
Q 015201 313 IGLD----W-TVDMADGRKR---LGNDISVQ--GNVDPA 341 (411)
Q Consensus 313 l~~d----~-~~di~~~~~~---~g~~~~l~--G~vd~~ 341 (411)
+-.. . .-.+..+++. .+ ++.|| |||.+.
T Consensus 145 ILTSG~~~~a~~g~~~L~~Lv~~a~-~i~Im~GgGv~~~ 182 (256)
T 1twd_A 145 VLTSGQKSDALQGLSKIMELIAHRD-APIIMAGAGVRAE 182 (256)
T ss_dssp EEECTTSSSTTTTHHHHHHHHTSSS-CCEEEEESSCCTT
T ss_pred EECCCCCCCHHHHHHHHHHHHHhhC-CcEEEecCCcCHH
Confidence 6321 1 1134444443 34 66665 677763
No 101
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=82.90 E-value=32 Score=32.49 Aligned_cols=126 Identities=15% Similarity=0.228 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCEEEEecC-CCCCCCH----HHHHHHHHHHHHHHHHHHHhhC--CCCCEEEEecC-
Q 015201 228 TLLSHLTQAIADYIIYQVESG--AHCIQIFDS-WGGQLPP----HMWEQWSEPYIREIVSLVRTKC--PETPIVLYING- 297 (411)
Q Consensus 228 ~ll~~~~d~~~~~~~~~~e~G--~d~i~i~D~-~~~~iSp----~~f~ef~~Py~k~i~~~i~~~~--~g~~~~~H~CG- 297 (411)
++.+.+.++..+.++.+.+.| ++.++++.- ..+++.| ..+ +-...++++.++.+|+.. ++.++++|.+.
T Consensus 104 ~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~-~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~ 182 (332)
T 1hjs_A 104 NLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENW-ANIARLLHSAAWGIKDSSLSPKPKIMIHLDNG 182 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCH-HHHHHHHHHHHHHHHTSCCSSCCEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCH-HHHHHHHHHHHHHHHHhccCCCCeEEEEeCCc
Confidence 334444455555566666665 566666542 2233322 123 334567778888999886 67778999873
Q ss_pred -Ccc----cHhHHhcCC------CcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCe
Q 015201 298 -NGG----FLERMKGTG------VDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGH 366 (411)
Q Consensus 298 -~~~----~l~~~~e~g------~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gf 366 (411)
+.. .++.+.+.| +|+++++...- + +. .++.+.+++..+++-+..++.=+
T Consensus 183 ~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~-------w----------~~---~~~~~~l~~~l~~~~~rygKpv~ 242 (332)
T 1hjs_A 183 WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPF-------Y----------SS---SATLSALKSSLDNMAKTWNKEIA 242 (332)
T ss_dssp TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSS-------S----------CT---TCCHHHHHHHHHHHHHHHCCEEE
T ss_pred cchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcc-------c----------CC---CCCHHHHHHHHHHHHHHHCCCEE
Confidence 221 236565544 77887765320 0 00 14677888888888777766677
Q ss_pred EEeCCCCC
Q 015201 367 ILNLGHGV 374 (411)
Q Consensus 367 Ils~gc~i 374 (411)
|.-+||..
T Consensus 243 v~EtG~~~ 250 (332)
T 1hjs_A 243 VVETNWPI 250 (332)
T ss_dssp EEECCCCS
T ss_pred EEEccCcc
Confidence 88888753
No 102
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=82.84 E-value=19 Score=33.95 Aligned_cols=73 Identities=18% Similarity=0.228 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++.+. ..++.+. +.+|++.|+.++.. -+ ....+.
T Consensus 33 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~ 105 (318)
T 3qfe_A 33 SQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIA----TARKAVG---PDFPIMAGVGAHSTRQVLEHINDASVA 105 (318)
T ss_dssp HHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHC---TTSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHH----HHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 3445566788899999988877774 799998877553 3333333 25799988876543 23 455578
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 106 Gadavlv 112 (318)
T 3qfe_A 106 GANYVLV 112 (318)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999753
No 103
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=82.79 E-value=7.7 Score=36.35 Aligned_cols=74 Identities=19% Similarity=0.150 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++.+. ..++.+... .+|++.|+.++.. -+ ....+.
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIE----IAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHH----HHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 3445566788899999988777774 799988777543 333444320 3789998877543 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 103 Gadavlv 109 (301)
T 3m5v_A 103 GADGILS 109 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 104
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=82.77 E-value=3 Score=38.74 Aligned_cols=110 Identities=13% Similarity=0.169 Sum_probs=62.9
Q ss_pred HHHHHHHHHhhCCCCCEEEEecCCcc------cHhHHhcCCCcEEEcC-----C-----------------CCC------
Q 015201 275 IREIVSLVRTKCPETPIVLYINGNGG------FLERMKGTGVDVIGLD-----W-----------------TVD------ 320 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG~~~------~l~~~~e~g~d~l~~d-----~-----------------~~d------ 320 (411)
+++.++.+++.+....+-+-..|+.+ .+..+.+.|+|++.+. + +++
T Consensus 7 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~ 86 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFE 86 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 56667777766422223444568753 2456677899998642 1 111
Q ss_pred -HHHHHHH-hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCCC
Q 015201 321 -MADGRKR-LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 321 -i~~~~~~-~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
+.++++. ..-.+.+||-.+|..-.| +.+.++++.+.+.+ |+|+ +|.|+|....+.+.+++||-.
T Consensus 87 ~v~~~r~~~~~~Pivlm~Y~n~v~~~g----~~~f~~~~~~aGvd-GvIi-------pDlp~ee~~~~~~~~~~~gl~ 152 (271)
T 3nav_A 87 LIAQIRARNPETPIGLLMYANLVYARG----IDDFYQRCQKAGVD-SVLI-------ADVPTNESQPFVAAAEKFGIQ 152 (271)
T ss_dssp HHHHHHHHCTTSCEEEEECHHHHHHTC----HHHHHHHHHHHTCC-EEEE-------TTSCGGGCHHHHHHHHHTTCE
T ss_pred HHHHHHhcCCCCCEEEEecCcHHHHHh----HHHHHHHHHHCCCC-EEEE-------CCCCHHHHHHHHHHHHHcCCe
Confidence 2333444 233577788777732245 34556666665444 5555 355566677777778887754
No 105
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=82.76 E-value=32 Score=32.31 Aligned_cols=111 Identities=15% Similarity=0.168 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
+..+.++...+..++++|+++.+++ + ++-.++.++...++|+|
T Consensus 66 Er~~v~~~~v~~~~grvpViaGvg~--~-----------------------------------t~~ai~la~~A~~~Gad 108 (316)
T 3e96_A 66 EAKEEVRRTVEYVHGRALVVAGIGY--A-----------------------------------TSTAIELGNAAKAAGAD 108 (316)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEECS--S-----------------------------------HHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEeCc--C-----------------------------------HHHHHHHHHHHHhcCCC
Confidence 3345556667777788998876532 1 12234566677789999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-c--cHhHHhcCCCcEEEc-CCCCCHHHHHH
Q 015201 251 CIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-G--FLERMKGTGVDVIGL-DWTVDMADGRK 326 (411)
Q Consensus 251 ~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~--~l~~~~e~g~d~l~~-d~~~di~~~~~ 326 (411)
++.+.-++-.-.|+ +-+.-|++.+.+.. ++|++++..|.. . .+..+.+.+ +++.+ +...|+....+
T Consensus 109 avlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~g~~l~~~~~~~La~~p-nIvgiKdssgd~~~~~~ 178 (316)
T 3e96_A 109 AVMIHMPIHPYVTA----GGVYAYFRDIIEAL-----DFPSLVYFKDPEISDRVLVDLAPLQ-NLVGVKYAINDLPRFAK 178 (316)
T ss_dssp EEEECCCCCSCCCH----HHHHHHHHHHHHHH-----TSCEEEEECCTTSCTHHHHHHTTCT-TEEEEEECCCCHHHHHH
T ss_pred EEEEcCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCCCCCCHHHHHHHHcCC-CEEEEEeCCCCHHHHHH
Confidence 99876665444454 45677889999887 468887776542 2 245555554 55555 44457766655
Q ss_pred Hh
Q 015201 327 RL 328 (411)
Q Consensus 327 ~~ 328 (411)
..
T Consensus 179 ~~ 180 (316)
T 3e96_A 179 VV 180 (316)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 106
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=82.66 E-value=22 Score=33.43 Aligned_cols=141 Identities=16% Similarity=0.115 Sum_probs=83.5
Q ss_pred HHHHHHhCCCEEEE--ecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE--e----cCCcc---cHhH-----
Q 015201 241 IIYQVESGAHCIQI--FDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY--I----NGNGG---FLER----- 304 (411)
Q Consensus 241 ~~~~~e~G~d~i~i--~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H--~----CG~~~---~l~~----- 304 (411)
.+..++.|+|++.+ .=..++--..+| +....++.+.++++ |.|++++ . -|... ..+.
T Consensus 134 Ve~AvrlGADaV~~l~~i~~Gs~~e~~~-----l~~la~vv~ea~~~--GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 134 VSSMVDRGVDFAKTLVRINLSDAGTAPT-----LEATAHAVNEAAAA--QLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp HHHHHHHTCCEEEEEEEECTTCTTHHHH-----HHHHHHHHHHHHHT--TCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCChhHHHH-----HHHHHHHHHHHHHc--CCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 34556779999763 223333222344 45567899999998 7998876 3 23221 1222
Q ss_pred --HhcCCCc----EEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCC--
Q 015201 305 --MKGTGVD----VIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLV-- 376 (411)
Q Consensus 305 --~~e~g~d----~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~-- 376 (411)
-.++|.| ++=+.+.-++.++.+...-.+.+.||=.. ++++++.+.+++.++..|..|.++ |=++..
T Consensus 207 RiAaELGADs~~tivK~~y~e~f~~Vv~a~~vPVViaGG~k~----~~~~e~L~~v~~A~~~aGa~Gv~v--GRNIfQ~~ 280 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLPVVEEMERVMESTTMPTLLLGGEGG----NDPDATFASWEHALTLPGVRGLTV--GRTLLYPQ 280 (307)
T ss_dssp HHHHTCSSCCSSEEEEEECCTTHHHHGGGCSSCEEEECCSCC------CHHHHHHHHHHTTSTTEEEEEE--CTTTSSCS
T ss_pred HHHHHhCCCcCCCEEEeCCcHHHHHHHHhCCCCEEEeCCCCC----CCHHHHHHHHHHHHHhCCCeEEee--chhhccCC
Confidence 2378999 87655544666666655544555554221 367899999999999534446665 445532
Q ss_pred -CCcHHHHHHHHHHHHhcC
Q 015201 377 -GTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 377 -~tp~Eni~a~~~a~~~yg 394 (411)
+-|..-++++...+|.-.
T Consensus 281 ~~dp~~~v~al~~iVH~~~ 299 (307)
T 3fok_A 281 DGDVAAAVDTAARLVHTDI 299 (307)
T ss_dssp SSCHHHHHHHHHHHHCCCC
T ss_pred CCCHHHHHHHHHHHHHhhH
Confidence 445566666666666433
No 107
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.60 E-value=33 Score=32.56 Aligned_cols=109 Identities=20% Similarity=0.300 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHH------HHH---HHHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 230 LSHLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPH------MWE---QWSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 230 l~~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~------~f~---ef~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||. .|- |-=..+..++++.+++.. +.|+.+-+.
T Consensus 139 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls 217 (340)
T 3gr7_A 139 IEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRIS 217 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEec
Confidence 333444445556677889999998874432 133331 110 111234556666666665 668877665
Q ss_pred CC-------c-c----cHhHHhcCCCcEEEcCCC------------CC---HHHHHHHhCCCeeEEccCC
Q 015201 297 GN-------G-G----FLERMKGTGVDVIGLDWT------------VD---MADGRKRLGNDISVQGNVD 339 (411)
Q Consensus 297 G~-------~-~----~l~~~~e~g~d~l~~d~~------------~d---i~~~~~~~g~~~~l~G~vd 339 (411)
.+ . . +...+.+.|+|.+++... .+ +.++++.++-.+...|+|.
T Consensus 218 ~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~ 287 (340)
T 3gr7_A 218 ASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLIT 287 (340)
T ss_dssp SCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCC
T ss_pred cccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCC
Confidence 32 1 1 236677889999986321 12 3456777765566667663
No 108
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=82.54 E-value=5.4 Score=38.58 Aligned_cols=98 Identities=12% Similarity=0.055 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCc----EE-EcCCCCCHHHHHHHhCC--CeeEEc-cCCcC
Q 015201 273 PYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVD----VI-GLDWTVDMADGRKRLGN--DISVQG-NVDPA 341 (411)
Q Consensus 273 Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d----~l-~~d~~~di~~~~~~~g~--~~~l~G-~vd~~ 341 (411)
..++..+...++. |.|+++|.-.... .++.+.+.|++ ++ +.+...|...+++.+.- .+.|-| +.+..
T Consensus 193 k~frA~a~aa~et--G~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~ 270 (360)
T 3tn4_A 193 MFFRAAARAQKET--GAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGM 270 (360)
T ss_dssp HHHHHHHHHHHHH--CCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCS
T ss_pred HHHHHHHHHHHHh--CCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccc
Confidence 4556667777776 7999999876543 36778888876 33 44566788888776642 222211 12221
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCCCeEEeCCC
Q 015201 342 CLFSPLPALTDEIQRVVKCAGSRGHILNLGH 372 (411)
Q Consensus 342 ~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc 372 (411)
.-.-+.++-.+.++++++.+.....+|++++
T Consensus 271 ~~~p~d~~r~~~l~~lv~~g~~drILLstDa 301 (360)
T 3tn4_A 271 VGAPTDEERVRTLLALLRDGYEKQIMLSHDT 301 (360)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred cCCCChHHHHHHHHHHHHhcCcceEEEecCC
Confidence 1123445666778888887655799999997
No 109
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=82.17 E-value=13 Score=34.81 Aligned_cols=122 Identities=13% Similarity=0.201 Sum_probs=69.0
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 56 ~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gadav 99 (297)
T 2rfg_A 56 KRVVALVAEQAQGRVPVIAGAGSN-----------N-------------------------PVEAVRYAQHAQQAGADAV 99 (297)
T ss_dssp HHHHHHHHHHHTTSSCBEEECCCS-----------S-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEccCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 344555666677788988766441 0 1233566677778899998
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCC---H
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVD---M 321 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~d---i 321 (411)
.+.-++-.-.|+ +-+.-|++.+.+.. ++|++++.. |.. . .+..+.+.+ ++..+ +...| +
T Consensus 100 lv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKds~gd~~~~ 169 (297)
T 2rfg_A 100 LCVAGYYNRPSQ----EGLYQHFKMVHDAI-----DIPIIVYNIPPRAVVDIKPETMARLAALP-RIVGVKDATTDLARI 169 (297)
T ss_dssp EECCCTTTCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECSCCTTHH
T ss_pred EEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcCC-CEEEEEeCCCCHHHH
Confidence 776664433344 45566777777765 468877764 321 2 234455543 45444 22223 3
Q ss_pred HHHHHHhCCCeeEEccCCc
Q 015201 322 ADGRKRLGNDISVQGNVDP 340 (411)
Q Consensus 322 ~~~~~~~g~~~~l~G~vd~ 340 (411)
.++++..+++..+..|-|.
T Consensus 170 ~~~~~~~~~~f~v~~G~d~ 188 (297)
T 2rfg_A 170 SRERMLINKPFSFLSGDDM 188 (297)
T ss_dssp HHHHTTCCSCCEEEESCGG
T ss_pred HHHHHhcCCCEEEEeCcHH
Confidence 3444444555555555554
No 110
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=82.15 E-value=14 Score=35.98 Aligned_cols=142 Identities=17% Similarity=0.148 Sum_probs=91.8
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc--------ccHhHHhcC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG--------GFLERMKGT 308 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~--------~~l~~~~e~ 308 (411)
..+|++.+.++|...|+. ++.+|+.-.+-+...++++++.+++. |..+++-+-... ..+..+.++
T Consensus 43 ~~~Yi~~a~~~Gf~~IFT-----SL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DVsp~~~~~Lg~s~~dl~~f~~l 115 (385)
T 1x7f_A 43 DMAYISAAARHGFSRIFT-----CLLSVNRPKEEIVAEFKEIINHAKDN--NMEVILDVAPAVFDQLGISYSDLSFFAEL 115 (385)
T ss_dssp HHHHHHHHHTTTEEEEEE-----EECCC--------HHHHHHHHHHHHT--TCEEEEEECTTCC------CCCTHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEc-----cCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 347888888999888753 46688888888899999999999998 677777666643 246778999
Q ss_pred CCcEEEcCCCCCHHHHHHHhCCC--eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC-C---CCCcHHH
Q 015201 309 GVDVIGLDWTVDMADGRKRLGND--ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGV-L---VGTPEEA 382 (411)
Q Consensus 309 g~d~l~~d~~~di~~~~~~~g~~--~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i-~---~~tp~En 382 (411)
|++++=+|...+..+..+.--+. +.+.=|..+ |++ ++.++++...+..-|.+. |+. | .|-+.+-
T Consensus 116 Gi~gLRLD~Gf~~~eia~ls~n~~glkIeLNASt-----~~~----~l~~l~~~~~n~~~l~ac-HNFYPr~~TGLs~~~ 185 (385)
T 1x7f_A 116 GADGIRLDVGFDGLTEAKMTNNPYGLKIELNVSN-----DIA----YLENILSHQANKSALIGC-HNFYPQKFTGLPYDY 185 (385)
T ss_dssp TCSEEEESSCCSSHHHHHHTTCTTCCEEEEETTS-----CSS----HHHHHTTSSCCGGGEEEE-CCCBCSTTCSBCHHH
T ss_pred CCCEEEEcCCCCHHHHHHHhcCCCCCEEEEeCcC-----CHH----HHHHHHHcCCChHHeEEe-eccCCCCCCCCCHHH
Confidence 99999999999888887754331 333322222 333 334455554443334433 554 3 3568899
Q ss_pred HHHHHHHHHhcCC
Q 015201 383 VAHFFEVGKSMKY 395 (411)
Q Consensus 383 i~a~~~a~~~yg~ 395 (411)
+...-+..|+||-
T Consensus 186 f~~~n~~~k~~Gi 198 (385)
T 1x7f_A 186 FIRCSERFKKHGI 198 (385)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999874
No 111
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=81.81 E-value=17 Score=34.53 Aligned_cols=73 Identities=16% Similarity=0.155 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 56 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~----~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 128 (332)
T 2r8w_A 56 AFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIE----AAATILRG---RRTLMAGIGALRTDEAVALAKDAEAA 128 (332)
T ss_dssp HHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 3345556778899999988887774 799998877653 33344432 4789988877543 23 445568
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 129 Gadavlv 135 (332)
T 2r8w_A 129 GADALLL 135 (332)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998753
No 112
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=81.81 E-value=12 Score=34.80 Aligned_cols=94 Identities=15% Similarity=0.192 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-c--c-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-G--G-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~--~-~l~~~~e~g 309 (411)
+-.++.++...++|+|++.+.-++-.- .|+ +=+.-|++++.+.. ++|++++..-. + . ..+.+.++
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~L- 147 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRLPE----KFLAKYYEEIARIS-----SHSLYIYNYPAATGYDIPPSILKSL- 147 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHTTT-
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEECchHhCcCCCHHHHhcc-
Confidence 344677778888999999877665433 454 44667788888765 57888877532 2 2 24667677
Q ss_pred CcEEEc-CCCCCHHHHHHH--hCCCeeEEccCC
Q 015201 310 VDVIGL-DWTVDMADGRKR--LGNDISVQGNVD 339 (411)
Q Consensus 310 ~d~l~~-d~~~di~~~~~~--~g~~~~l~G~vd 339 (411)
++..+ +..-|+....+. .+++..+..|-|
T Consensus 148 -nIvgiKdssgd~~~~~~~~~~~~~f~v~~G~d 179 (288)
T 2nuw_A 148 -PVKGIKDTNQDLAHSLEYKLNLPGVKVYNGSN 179 (288)
T ss_dssp -TEEEEEECCSCHHHHHHHHHHSTTCEEEECCG
T ss_pred -EEEEEEeCCCCHHHHHHHHhcCCCeEEEECcH
Confidence 66655 344465554332 455665555554
No 113
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=81.79 E-value=27 Score=32.31 Aligned_cols=121 Identities=15% Similarity=0.152 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 57 ~~v~~~~~~~~~gr~pviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 100 (292)
T 2ojp_A 57 ADVVMMTLDLADGRIPVIAGTGAN-----------A-------------------------TAEAISLTQRFNDSGIVGC 100 (292)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCS-----------S-------------------------HHHHHHHHHHTTTSSCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCc-----------c-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 344555666677788988766442 0 1333466677778999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|+ +=+.-|++.+.+.. +.|++++.. |.. . .+..+.+. -++..+ +...|+...
T Consensus 101 lv~~P~y~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~-pnivgiK~s~gd~~~~ 170 (292)
T 2ojp_A 101 LTVTPYYNRPSQ----EGLYQHFKAIAEHT-----DLPQILYNVPSRTGCDLLPETVGRLAKV-KNIIGIXEATGNLTRV 170 (292)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHTTC-----SSCEEEECCHHHHSCCCCHHHHHHHHTS-TTEEEC-CCSCCTHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCcchhccCCCHHHHHHHHcC-CCEEEEeCCCCCHHHH
Confidence 887765433455 44566777777654 578888774 432 2 24445554 356666 444466655
Q ss_pred HHH---hCCCeeEEccCC
Q 015201 325 RKR---LGNDISVQGNVD 339 (411)
Q Consensus 325 ~~~---~g~~~~l~G~vd 339 (411)
.+. .+++..++.|-|
T Consensus 171 ~~~~~~~~~~f~v~~G~d 188 (292)
T 2ojp_A 171 NQIKELVSDDFVLLSGDD 188 (292)
T ss_dssp HHHHTTSCTTSBCEESCG
T ss_pred HHHHHhcCCCEEEEECcH
Confidence 544 333444443333
No 114
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=81.68 E-value=33 Score=31.77 Aligned_cols=122 Identities=18% Similarity=0.158 Sum_probs=73.6
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|+++.+++. + ++-.++.++...++|+|++
T Consensus 58 ~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 101 (292)
T 3daq_A 58 ELILKTVIDLVDKRVPVIAGTGTN-----------D-------------------------TEKSIQASIQAKALGADAI 101 (292)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCS-----------C-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCcc-----------c-------------------------HHHHHHHHHHHHHcCCCEE
Confidence 344555666667789988766442 0 2334566667778899999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|+ +=+.-|++.+.+.. ++|++++.+ |.. . .+..+.+.+ +++.+ +...|+...
T Consensus 102 lv~~P~y~~~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~ssgd~~~~ 171 (292)
T 3daq_A 102 MLITPYYNKTNQ----RGLVKHFEAIADAV-----KLPVVLYNVPSRTNMTIEPETVEILSQHP-YIVALKDATNDFEYL 171 (292)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHH-----CSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECCCCHHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEEEeCCCCHHHH
Confidence 887765443454 34666889998887 468877765 322 2 245556643 56655 344466655
Q ss_pred HHH---hCC-CeeEEccCCc
Q 015201 325 RKR---LGN-DISVQGNVDP 340 (411)
Q Consensus 325 ~~~---~g~-~~~l~G~vd~ 340 (411)
.+. .++ +..+..|-|.
T Consensus 172 ~~~~~~~~~~~f~v~~G~d~ 191 (292)
T 3daq_A 172 EEVKKRIDTNSFALYSGNDD 191 (292)
T ss_dssp HHHHTTSCTTTSEEEESCGG
T ss_pred HHHHHHCCCCCEEEEECCHH
Confidence 443 344 4555544443
No 115
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=81.65 E-value=35 Score=32.01 Aligned_cols=122 Identities=13% Similarity=0.258 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++ ++ +-.++.++...++|+|+
T Consensus 67 r~~vi~~~~~~~~grvpViaGvg~--st-----------------------------------~~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 67 AKQVATRVTELVNGRATVVAGIGY--SV-----------------------------------DTAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHHHHHTTSSEEEEEECS--SH-----------------------------------HHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHhCCCCeEEecCCc--CH-----------------------------------HHHHHHHHHHHHcCCCE
Confidence 345555566777778998876643 21 12236666777889999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc--cHhHHhcCCCcEEEc-CCCCCHHHH---
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG--FLERMKGTGVDVIGL-DWTVDMADG--- 324 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~--~l~~~~e~g~d~l~~-d~~~di~~~--- 324 (411)
+.+.-++-.-.|+ +=+.-|++.+.+.. ++|++++.. |... .+..+.+.+ ++..+ +...|+...
T Consensus 110 vlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~tg~l~~~~~~~La~~p-nIvgiKdssgd~~~~~~~ 179 (314)
T 3d0c_A 110 VMIHQPVHPYITD----AGAVEYYRNIIEAL-----DAPSIIYFKDAHLSDDVIKELAPLD-KLVGIKYAINDIQRVTQV 179 (314)
T ss_dssp EEECCCCCSCCCH----HHHHHHHHHHHHHS-----SSCEEEEECCTTSCTHHHHHHTTCT-TEEEEEECCCCHHHHHHH
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCCCCcCHHHHHHHHcCC-CEEEEEeCCCCHHHHHHH
Confidence 9877665433454 44677888888765 468776653 3311 133444442 45554 333455443
Q ss_pred HHHhCC--CeeEEccCCc
Q 015201 325 RKRLGN--DISVQGNVDP 340 (411)
Q Consensus 325 ~~~~g~--~~~l~G~vd~ 340 (411)
.+..++ +..+..|-|.
T Consensus 180 ~~~~~~~~~f~v~~G~d~ 197 (314)
T 3d0c_A 180 MRAVPKSSNVAFICGTAE 197 (314)
T ss_dssp HHHSCGGGCCEEEETTHH
T ss_pred HHhcCCCCCEEEEEeCcH
Confidence 344454 4555544444
No 116
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.46 E-value=16 Score=34.45 Aligned_cols=73 Identities=16% Similarity=0.283 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 46 ~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 118 (315)
T 3na8_A 46 ALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVD----FTLKTVAH---RVPTIVSVSDLTTAKTVRRAQFAESL 118 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 3345566778899999988777764 799998877543 33344432 5789988776543 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 119 Gadavlv 125 (315)
T 3na8_A 119 GAEAVMV 125 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999854
No 117
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=81.45 E-value=12 Score=35.01 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+. +.+|++.++.++.. -+ ....+.
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~----~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~ 105 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLE----IVAEEAK---GKIKLIAHVGCVSTAESQQLAASAKRY 105 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHT---TTSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHH----HHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhC
Confidence 3445566778899999988887774 699998877643 3334443 25788888877543 23 445568
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 106 Gadavlv 112 (303)
T 2wkj_A 106 GFDAVSA 112 (303)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 9998743
No 118
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=81.38 E-value=7.5 Score=37.20 Aligned_cols=71 Identities=18% Similarity=0.185 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCccc-H---hHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGGF-L---ERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~~-l---~~~~e~g 309 (411)
+++.+.++...++|++.|.+.|..|. ..|+.+.++ ++.+++..| ++|+-+|.+-+... + ..-.+.|
T Consensus 149 e~~~~ia~~~~~~Ga~~i~l~DT~G~-~~P~~v~~l--------v~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 149 EKLAEQGKLMESYGATCIYMADSGGA-MSMNDIRDR--------MRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTCC-CCHHHHHHH--------HHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCc-cCHHHHHHH--------HHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC
Confidence 44455556667779999999888765 468776654 445555443 67899999887652 3 3345689
Q ss_pred CcEEE
Q 015201 310 VDVIG 314 (411)
Q Consensus 310 ~d~l~ 314 (411)
++.+.
T Consensus 220 a~~vd 224 (345)
T 1nvm_A 220 CDRVD 224 (345)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 99884
No 119
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=81.12 E-value=9.1 Score=36.65 Aligned_cols=138 Identities=14% Similarity=0.109 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. .+++.+.. .+|++.++.++.. -+ ....+.
T Consensus 53 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~----~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 125 (343)
T 2v9d_A 53 GTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIAR----FAIDHVDR---RVPVLIGTGGTNARETIELSQHAQQA 125 (343)
T ss_dssp HHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 3345566778899999988877774 799998877653 33344432 5789988877643 23 445568
Q ss_pred CCcEEEcC----CCCCHHHHHHHhC------CCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCC-CCeEEeCCCCCCC
Q 015201 309 GVDVIGLD----WTVDMADGRKRLG------NDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGS-RGHILNLGHGVLV 376 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~g------~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~-~gfIls~gc~i~~ 376 (411)
|+|++.+- +..+-+++.+.|. +--++.=|++... ..-++|.+.+-++ +..+ -|+--++|
T Consensus 126 Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~----~~pnIvgiKdssg----- 196 (343)
T 2v9d_A 126 GADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLAD----SRSNIIGIKDTID----- 196 (343)
T ss_dssp TCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHH----HCTTEEEEEECCS-----
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHH----hCCCEEEEEeCCC-----
Confidence 99997431 1235555544442 1112233443221 2346666654432 2222 23333332
Q ss_pred CCcHHHHHHHHHHHH
Q 015201 377 GTPEEAVAHFFEVGK 391 (411)
Q Consensus 377 ~tp~Eni~a~~~a~~ 391 (411)
+.+++..+++...
T Consensus 197 --d~~~~~~l~~~~~ 209 (343)
T 2v9d_A 197 --SVAHLRSMIHTVK 209 (343)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHhcC
Confidence 3667777777654
No 120
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=81.03 E-value=12 Score=35.54 Aligned_cols=75 Identities=15% Similarity=0.179 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEE
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVI 313 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l 313 (411)
.+...+++..+.+..+|.- +|+....-...++...++..+.+.+.++|+.+|.+ |... .+..-++.|++.+
T Consensus 30 ~~~Ail~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSV 102 (323)
T 2isw_A 30 QIQGIMKAVVQLKSPVILQ-------CSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSV 102 (323)
T ss_dssp HHHHHHHHHHHTTCCEEEE-------EEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEE-------CChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeE
Confidence 3344555677778887642 33332211123444555555544423799999997 4333 5677888999999
Q ss_pred EcCC
Q 015201 314 GLDW 317 (411)
Q Consensus 314 ~~d~ 317 (411)
.+|.
T Consensus 103 MiDg 106 (323)
T 2isw_A 103 MIDA 106 (323)
T ss_dssp EECC
T ss_pred EecC
Confidence 8874
No 121
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=81.02 E-value=12 Score=34.85 Aligned_cols=73 Identities=16% Similarity=0.223 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+..+.|. .+|.++.++.+. ...+.+.. .+|++.+..++.. -+ ....+.
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 22 GLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIE----KVVDVVNG---RVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4445666788899999988877774 699998877543 33344432 4788888877543 23 445568
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 95 Gadavlv 101 (289)
T 2yxg_A 95 GADAVLS 101 (289)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999743
No 122
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=80.92 E-value=5.3 Score=38.03 Aligned_cols=71 Identities=14% Similarity=0.223 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCC---CCEEEEecCCccc-H-hH--Hhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPE---TPIVLYINGNGGF-L-ER--MKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g---~~~~~H~CG~~~~-l-~~--~~e 307 (411)
+++.+.++.+.++|++.|.+.|..|. +.|..+.++ ++.+++..++ +++-+|...+... + .. -.+
T Consensus 151 ~~~~~~~~~~~~~G~~~i~l~DT~G~-~~P~~v~~l--------v~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~ 221 (325)
T 3eeg_A 151 AFLARMVEAVIEAGADVVNIPDTTGY-MLPWQYGER--------IKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQ 221 (325)
T ss_dssp HHHHHHHHHHHHHTCSEEECCBSSSC-CCHHHHHHH--------HHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEecCccCC-cCHHHHHHH--------HHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHH
Confidence 34455566777889999988777665 888776554 4445544443 6788898877652 3 33 335
Q ss_pred CCCcEEE
Q 015201 308 TGVDVIG 314 (411)
Q Consensus 308 ~g~d~l~ 314 (411)
.|++.+.
T Consensus 222 aGa~~vd 228 (325)
T 3eeg_A 222 NGARQVE 228 (325)
T ss_dssp HTCCEEE
T ss_pred hCCCEEE
Confidence 7999984
No 123
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=80.38 E-value=10 Score=35.81 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 44 ~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 44 AFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIE----LCVEQVAK---RVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp HHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 3345566778899999988777764 799988877653 33344432 5789988776543 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 117 Gadavlv 123 (315)
T 3si9_A 117 GADAVLV 123 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 124
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=80.36 E-value=38 Score=31.59 Aligned_cols=150 Identities=10% Similarity=0.127 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g 309 (411)
+..++.++.+++.|||.|-++-.+ +..+|++.=.+-+.|..+.+.+ . ++|+.+ +-... .++.-.+.|
T Consensus 46 ~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~----~--~vpiSI--DT~~~~Va~aAl~aG 117 (294)
T 2y5s_A 46 DDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRP----L--NVPLSI--DTYKPAVMRAALAAG 117 (294)
T ss_dssp THHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGG----G--CSCEEE--ECCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhh----C--CCeEEE--ECCCHHHHHHHHHcC
Confidence 345567788999999999888632 2378888766777777777653 2 467543 33333 456666679
Q ss_pred CcEEE-cCC--CCCHHHHHHHhCCCeeEEccC-CcCcc------CCCH-HHHHHHHHHHHHHhC----C-CCeEEeCCCC
Q 015201 310 VDVIG-LDW--TVDMADGRKRLGNDISVQGNV-DPACL------FSPL-PALTDEIQRVVKCAG----S-RGHILNLGHG 373 (411)
Q Consensus 310 ~d~l~-~d~--~~di~~~~~~~g~~~~l~G~v-d~~~L------~gt~-eeV~~ev~~~i~~~~----~-~gfIls~gc~ 373 (411)
++++| +.. ...+..+.+++|-.+++|-.- .|..+ +.+. +++.+..++.++.+. + ..+|+-||-+
T Consensus 118 a~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~G 197 (294)
T 2y5s_A 118 ADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFG 197 (294)
T ss_dssp CSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTT
T ss_pred CCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCc
Confidence 99995 322 335777777788777776431 12211 2232 667777777776543 2 4799999988
Q ss_pred CCCCCc-HHHHHHHHHHHHhcC
Q 015201 374 VLVGTP-EEAVAHFFEVGKSMK 394 (411)
Q Consensus 374 i~~~tp-~Eni~a~~~a~~~yg 394 (411)
.. .+. .+|+. +++..+++.
T Consensus 198 f~-kt~~~~n~~-ll~~l~~l~ 217 (294)
T 2y5s_A 198 FG-KAVVDDNYA-LLAALPDTA 217 (294)
T ss_dssp SS-SCTTHHHHH-HHHTGGGGS
T ss_pred cc-ccchHHHHH-HHHHHHHHH
Confidence 74 455 67754 444455554
No 125
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=80.17 E-value=13 Score=34.95 Aligned_cols=73 Identities=21% Similarity=0.286 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+. +.+|++.++.++.. -+ ....+.
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~---grvpViaGvg~~st~eai~la~~A~~~ 117 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIR----RVVDQVK---GRIPVIAGTGANSTREAVALTEAAKSG 117 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHH----HHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 3345555678899999988877774 799998877654 3334443 25789988776543 23 556678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 118 Gadavlv 124 (314)
T 3qze_A 118 GADACLL 124 (314)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 126
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=80.14 E-value=8.1 Score=35.52 Aligned_cols=150 Identities=9% Similarity=0.052 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+...++++++.++|++.+.+. .+-..-||..|+-+....++.+.+..++. |+|++-=.. +...++.+.++ +|.+-
T Consensus 37 e~a~~~a~~l~~~Ga~~vk~~-~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~-d~~~~~~l~~~-vd~~k 111 (262)
T 1zco_A 37 EQIMKVAEFLAEVGIKVLRGG-AFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVM-DTRHVELVAKY-SDILQ 111 (262)
T ss_dssp HHHHHHHHHHHHTTCCEEECB-SSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECC-CGGGHHHHHHH-CSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEE-ecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeC-CHHhHHHHHhh-CCEEE
Confidence 344566677788999987533 21111122222222355566667777776 677543222 22247778788 88886
Q ss_pred cCC--CCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCC--CCCCCCCcHH--HHHHH
Q 015201 315 LDW--TVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLG--HGVLVGTPEE--AVAHF 386 (411)
Q Consensus 315 ~d~--~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~g--c~i~~~tp~E--ni~a~ 386 (411)
+.. ..+..-+++. .|..+.+-- -..+|.+|+.+.+..+...+.+.-.++--| |.-.. +.+ |+.++
T Consensus 112 Iga~~~~n~~ll~~~a~~~kPV~lk~-----G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y--~~~~v~L~ai 184 (262)
T 1zco_A 112 IGARNSQNFELLKEVGKVENPVLLKR-----GMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETA--TRFTLDISAV 184 (262)
T ss_dssp ECGGGTTCHHHHHHHTTSSSCEEEEC-----CTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCS--SSSBCCTTHH
T ss_pred ECcccccCHHHHHHHHhcCCcEEEec-----CCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCc--ChhhcCHHHH
Confidence 643 3354444443 222222211 123589999988876655432233333334 42122 333 44455
Q ss_pred HHHHHhcCCC
Q 015201 387 FEVGKSMKYD 396 (411)
Q Consensus 387 ~~a~~~yg~~ 396 (411)
....+.++.+
T Consensus 185 ~~lk~~~~~p 194 (262)
T 1zco_A 185 PVVKELSHLP 194 (262)
T ss_dssp HHHHHHBSSC
T ss_pred HHHHhhhCCC
Confidence 4444444543
No 127
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=80.00 E-value=5.5 Score=36.63 Aligned_cols=108 Identities=15% Similarity=0.153 Sum_probs=57.1
Q ss_pred HHHHHHHHHhhCCCCCEE-EEecCCcc---c---HhHHhcCCCcEEEcCCCC-----C----------------------
Q 015201 275 IREIVSLVRTKCPETPIV-LYINGNGG---F---LERMKGTGVDVIGLDWTV-----D---------------------- 320 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~-~H~CG~~~---~---l~~~~e~g~d~l~~d~~~-----d---------------------- 320 (411)
+++.++.+++.+ ...++ +-.||+.. . +..+.+.|+|.+.++... |
T Consensus 4 ~~~~f~~~~~~~-~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~ 82 (268)
T 1qop_A 4 YENLFAQLNDRR-EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCF 82 (268)
T ss_dssp HHHHHHHHHHTT-CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhcC-CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 345555555442 22233 33588862 2 355667899999764311 1
Q ss_pred --HHHHHHH-hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 321 --MADGRKR-LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 --i~~~~~~-~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++++. ..-.+.+|+..+|..-.|. .+.++++.+.+.+ |+|+. +.+.|.+..+++.++++|.
T Consensus 83 ~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~----~~~~~~~~~aGad-gii~~-------d~~~e~~~~~~~~~~~~g~ 148 (268)
T 1qop_A 83 EMLAIIREKHPTIPIGLLMYANLVFNNGI----DAFYARCEQVGVD-SVLVA-------DVPVEESAPFRQAALRHNI 148 (268)
T ss_dssp HHHHHHHHHCSSSCEEEEECHHHHHTTCH----HHHHHHHHHHTCC-EEEET-------TCCGGGCHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCCCCEEEEEcccHHHHhhH----HHHHHHHHHcCCC-EEEEc-------CCCHHHHHHHHHHHHHcCC
Confidence 4455555 3333555655555322343 3455555555433 55552 3334667777777777774
No 128
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=79.93 E-value=11 Score=35.35 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~----~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 106 (301)
T 1xky_A 34 KTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYR----HVVSVVDK---RVPVIAGTGSNNTHASIDLTKKATEV 106 (301)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CceEEeCCCCCCHHHHHHHHHHHHhc
Confidence 3445566788899999988877774 699998877653 33344432 5789988877543 23 445678
Q ss_pred CCcEEEcC----CCCCHHHHHHHh
Q 015201 309 GVDVIGLD----WTVDMADGRKRL 328 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~ 328 (411)
|+|++.+- +..+-+++.+.|
T Consensus 107 Gadavlv~~P~y~~~s~~~l~~~f 130 (301)
T 1xky_A 107 GVDAVMLVAPYYNKPSQEGMYQHF 130 (301)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCEEEEcCCCCCCCCHHHHHHHH
Confidence 99997431 133545555444
No 129
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=79.93 E-value=10 Score=35.63 Aligned_cols=86 Identities=7% Similarity=-0.016 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+. +.+|++.|+.++.. -+ ....+.
T Consensus 37 ~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~----~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 37 TAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLR----AVLEAVG---DRARVIAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHH----HHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 3445566778899999988887774 799998877543 3334443 25788888755543 23 455678
Q ss_pred CCcEEEcC----CCCCHHHHHHHh
Q 015201 309 GVDVIGLD----WTVDMADGRKRL 328 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~ 328 (411)
|+|++.+- +..+-+++.+.|
T Consensus 110 Gadavlv~~P~y~~~s~~~l~~~f 133 (304)
T 3l21_A 110 GAHGLLVVTPYYSKPPQRGLQAHF 133 (304)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCHHHHHHHH
Confidence 99998531 123545554444
No 130
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.88 E-value=35 Score=30.99 Aligned_cols=77 Identities=14% Similarity=0.150 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHH---------HHHHHHHHHHHhhCCCCCEEEEecCCc-------
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSE---------PYIREIVSLVRTKCPETPIVLYINGNG------- 299 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~---------Py~k~i~~~i~~~~~g~~~~~H~CG~~------- 299 (411)
..+.++.+.++|+|.|-+.-+..+ +.....-.+-.. ...-++++.+++..|++|+++- +.+
T Consensus 33 ~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m--~y~n~v~~~g 110 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM--TYYNPIFRIG 110 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE--CCHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE--ecCcHHHHhh
Confidence 467788899999999988766543 223222222211 1233556777766446787663 332
Q ss_pred --ccHhHHhcCCCcEEEc
Q 015201 300 --GFLERMKGTGVDVIGL 315 (411)
Q Consensus 300 --~~l~~~~e~g~d~l~~ 315 (411)
.+++...+.|+|++.+
T Consensus 111 ~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 111 LEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 1346677899998765
No 131
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=79.62 E-value=40 Score=31.45 Aligned_cols=123 Identities=15% Similarity=0.157 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. -++-.++.++...++|+|+
T Consensus 69 r~~v~~~~~~~~~gr~pviaGvg~~------------------------------------~t~~ai~la~~A~~~Gada 112 (307)
T 3s5o_A 69 RLEVVSRVRQAMPKNRLLLAGSGCE------------------------------------STQATVEMTVSMAQVGADA 112 (307)
T ss_dssp HHHHHHHHHHTSCTTSEEEEECCCS------------------------------------SHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCCcEEEecCCC------------------------------------CHHHHHHHHHHHHHcCCCE
Confidence 3455555667777789988766442 0233456677778899999
Q ss_pred EEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHhcCCCcEEEc-CCCCCH
Q 015201 252 IQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMKGTGVDVIGL-DWTVDM 321 (411)
Q Consensus 252 i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~e~g~d~l~~-d~~~di 321 (411)
+.+.-+.-. -.|+ +-+.-|++.+.+.. ++|++++.. |. .. .+..+.+.+ +++.+ +...|+
T Consensus 113 vlv~~P~y~~~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~ 182 (307)
T 3s5o_A 113 AMVVTPCYYRGRMSS----AALIHHYTKVADLS-----PIPVVLYSVPANTGLDLPVDAVVTLSQHP-NIVGMXDSGGDV 182 (307)
T ss_dssp EEEECCCTTGGGCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECSCCH
T ss_pred EEEcCCCcCCCCCCH----HHHHHHHHHHHhhc-----CCCEEEEeCCcccCCCCCHHHHHHHhcCC-CEEEEEcCCCCH
Confidence 987655432 1344 45666788887765 578887775 32 22 244555653 56665 444566
Q ss_pred HHHHH---Hh-CCCeeEEccCCc
Q 015201 322 ADGRK---RL-GNDISVQGNVDP 340 (411)
Q Consensus 322 ~~~~~---~~-g~~~~l~G~vd~ 340 (411)
....+ .. +++..+..|-|.
T Consensus 183 ~~~~~~~~~~~~~~f~v~~G~d~ 205 (307)
T 3s5o_A 183 TRIGLIVHKTRKQDFQVLAGSAG 205 (307)
T ss_dssp HHHHHHHHHTTTSSCEEEESSGG
T ss_pred HHHHHHHHhccCCCeEEEeCcHH
Confidence 65543 33 345666555554
No 132
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=79.26 E-value=14 Score=34.78 Aligned_cols=72 Identities=11% Similarity=0.165 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+ +.+|++.++.++.. -+ ....+.
T Consensus 30 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~----~~v~~~----grvpViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 30 SIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVAT----RFIKRA----KSMQVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp HHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHH----HHHHHC----TTSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHH----HHHHHc----CCCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 3445566778999999988877774 799988877543 223333 25788888766543 23 455578
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 102 Gadavlv 108 (313)
T 3dz1_A 102 GAAGVMI 108 (313)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999854
No 133
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=78.87 E-value=21 Score=34.32 Aligned_cols=108 Identities=15% Similarity=0.237 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCCC----CCCHHH----------HHHHHHHHHHHHHHHHHhhCC-CCCEEEE
Q 015201 230 LSHLTQAIADYIIYQVESGAHCIQIFDSWGG----QLPPHM----------WEQWSEPYIREIVSLVRTKCP-ETPIVLY 294 (411)
Q Consensus 230 l~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~----~iSp~~----------f~ef~~Py~k~i~~~i~~~~~-g~~~~~H 294 (411)
++.+.+...+.++...++|.|+|-+.-.-+- |+||.. ++. =.-+..++++.+++..| +.|+.+-
T Consensus 153 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVr~avg~d~pV~vR 231 (363)
T 3l5l_A 153 IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDN-RSRFLLETLAAVREVWPENLPLTAR 231 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHH-HHHHHHHHHHHHHHHcCCCceEEEE
Confidence 3334444555566778999999988754321 334321 111 13355677777777643 4567665
Q ss_pred ecCC-------c---c---cHhHHhcCCCcEEEcCC-------------CCC---HHHHHHHhCCCeeEEccC
Q 015201 295 INGN-------G---G---FLERMKGTGVDVIGLDW-------------TVD---MADGRKRLGNDISVQGNV 338 (411)
Q Consensus 295 ~CG~-------~---~---~l~~~~e~g~d~l~~d~-------------~~d---i~~~~~~~g~~~~l~G~v 338 (411)
+..+ . . +...+.+.|+|.+++.. ..+ +..+++.++-.+...|++
T Consensus 232 is~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 232 FGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSST
T ss_pred ecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCC
Confidence 4421 1 1 23667788999997531 012 345666675555555655
No 134
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=78.84 E-value=28 Score=32.65 Aligned_cols=73 Identities=10% Similarity=0.208 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++.+.- .++.+. +.+|++.++.++.. -+ ....+.
T Consensus 30 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~----~~~~~~---grvpviaGvg~~~t~~ai~la~~A~~~ 102 (309)
T 3fkr_A 30 SQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRT----ILEHVA---GRVPVIVTTSHYSTQVCAARSLRAQQL 102 (309)
T ss_dssp HHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHH----HHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHH----HHHHhC---CCCcEEEecCCchHHHHHHHHHHHHHc
Confidence 3445566788999999988877774 7999988775532 333443 25899999876643 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 103 Gadavlv 109 (309)
T 3fkr_A 103 GAAMVMA 109 (309)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 135
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=78.60 E-value=41 Score=31.30 Aligned_cols=95 Identities=14% Similarity=0.148 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTG 309 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g 309 (411)
.++.++...++|+|++.+.-++-.-.|+ +=+.-|++++.+.. ++|++++.. |.. . .+..+.+.
T Consensus 96 ai~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~- 165 (301)
T 1xky_A 96 SIDLTKKATEVGVDAVMLVAPYYNKPSQ----EGMYQHFKAIAEST-----PLPVMLYNVPGRSIVQISVDTVVRLSEI- 165 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCH----HHHHHHHHHHHHTC-----SSCEEEEECHHHHSSCCCHHHHHHHHTS-
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcC-
Confidence 4567777888999999887765433454 44566777777655 578888774 321 2 23445554
Q ss_pred CcEEEc-CCCCCHHH---HHHHhCCCeeEEccCCcC
Q 015201 310 VDVIGL-DWTVDMAD---GRKRLGNDISVQGNVDPA 341 (411)
Q Consensus 310 ~d~l~~-d~~~di~~---~~~~~g~~~~l~G~vd~~ 341 (411)
-+++.+ +..-|+.. +.+..+++..+..|-|..
T Consensus 166 pnIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~~ 201 (301)
T 1xky_A 166 ENIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDGL 201 (301)
T ss_dssp TTEEEEEECSSCHHHHHHHHHHSCTTCEEEESSGGG
T ss_pred CCEEEEEcCCCCHHHHHHHHHhcCCCeEEEECcHHH
Confidence 355555 33345544 444556667666666653
No 136
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=78.58 E-value=19 Score=33.38 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++.-..|. .+|.++.++++.-. ++.+. +.+|++.|+.++.. -+ ....+.
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~----~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTV----IDLVD---KRVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHH----HHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHH----HHHhC---CCCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 4445566788899999988877774 79999988765433 33333 25799988765432 23 455678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 97 Gadavlv 103 (292)
T 3daq_A 97 GADAIML 103 (292)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999753
No 137
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=78.51 E-value=35 Score=31.97 Aligned_cols=124 Identities=14% Similarity=0.150 Sum_probs=75.8
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGA- 249 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~- 249 (411)
+..+.++...+..++++|+++.+++. + ++-.++.++...++|+
T Consensus 61 Er~~v~~~~~~~~~grvpViaGvg~~-----------~-------------------------t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 61 EELELFAAVQKVVNGRVPLIAGVGTN-----------D-------------------------TRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp HHHHHHHHHHHHSCSSSCEEEECCCS-----------S-------------------------HHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHhCCCCcEEEeCCCc-----------C-------------------------HHHHHHHHHHHHhcCCC
Confidence 33455566677777888988766431 0 2333566777788897
Q ss_pred CEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCH
Q 015201 250 HCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDM 321 (411)
Q Consensus 250 d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di 321 (411)
|++.+.-++-.-.|++ =+.-|++.+.+.. ++|++++.+ |.. . .+..+.+.+ +++.+ +.. |+
T Consensus 105 davlv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdss-d~ 173 (311)
T 3h5d_A 105 AAGLAIVPYYNKPSQE----GMYQHFKAIADAS-----DLPIIIYNIPGRVVVELTPETMLRLADHP-NIIGVKECT-SL 173 (311)
T ss_dssp SEEEEECCCSSCCCHH----HHHHHHHHHHHSC-----SSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEEEECS-CH
T ss_pred cEEEEcCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEEEeCC-CH
Confidence 9998877654444543 3556788888766 578888875 322 2 245566653 56655 344 76
Q ss_pred HHHH---HHhCCCeeEEccCCcC
Q 015201 322 ADGR---KRLGNDISVQGNVDPA 341 (411)
Q Consensus 322 ~~~~---~~~g~~~~l~G~vd~~ 341 (411)
.... +..+++..+..|-|..
T Consensus 174 ~~~~~~~~~~~~~f~v~~G~d~~ 196 (311)
T 3h5d_A 174 ANMAYLIEHKPEEFLIYTGEDGD 196 (311)
T ss_dssp HHHHHHHHHCCSSCEEEECCGGG
T ss_pred HHHHHHHHHcCCCEEEEECcHHH
Confidence 6544 4456666666655553
No 138
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=78.31 E-value=44 Score=31.13 Aligned_cols=124 Identities=15% Similarity=0.125 Sum_probs=73.4
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|+++.+++. + ++-.++.++...++|+|++
T Consensus 67 ~~v~~~~~~~~~grvpViaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gadav 110 (303)
T 2wkj_A 67 EQVLEIVAEEAKGKIKLIAHVGCV-----------S-------------------------TAESQQLAASAKRYGFDAV 110 (303)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCS-----------S-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCC-----------C-------------------------HHHHHHHHHHHHhCCCCEE
Confidence 345555666677789988766442 0 1333566777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|+ +=+.-|++.+.+... ++|++++.. |.. . .+..+.+. -++..+ +...|+...
T Consensus 111 lv~~P~y~~~s~----~~l~~~f~~va~a~~----~lPiilYn~P~~tg~~l~~~~~~~La~~-pnIvgiK~s~gd~~~~ 181 (303)
T 2wkj_A 111 SAVTPFYYPFSF----EEHCDHYRAIIDSAD----GLPMVVYNIPALSGVKLTLDQINTLVTL-PGVGALXQTSGDLYQM 181 (303)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHHT----TCCEEEEECHHHHCCCCCHHHHHHHHTS-TTEEEEEECCCCHHHH
T ss_pred EecCCCCCCCCH----HHHHHHHHHHHHhCC----CCCEEEEeCccccCCCCCHHHHHHHhcC-CCEEEEeCCCCCHHHH
Confidence 887765433454 456678888888762 378888774 432 2 24445554 355555 344455444
Q ss_pred HHHh--CCCeeEEccCCcC
Q 015201 325 RKRL--GNDISVQGNVDPA 341 (411)
Q Consensus 325 ~~~~--g~~~~l~G~vd~~ 341 (411)
.+.. +++..+..|-|..
T Consensus 182 ~~~~~~~~~f~v~~G~d~~ 200 (303)
T 2wkj_A 182 EQIRREHPDLVLYNGYDNI 200 (303)
T ss_dssp HHHHHHCTTCEEEECCGGG
T ss_pred HHHHHhCCCeEEEeCcHHH
Confidence 3322 3456555555543
No 139
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=78.14 E-value=22 Score=33.40 Aligned_cols=59 Identities=19% Similarity=0.192 Sum_probs=36.4
Q ss_pred HHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCC-CEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 245 VESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPET-PIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 245 ~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~-~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
.+.|+..|.+.. |. ++.|+ +.++++.+++.+ ++ .+.+.+-|..- .++.+++.|++.+++
T Consensus 63 ~~~g~~~i~~tG--GEPll~~~---------l~~li~~~~~~~-~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~i 125 (340)
T 1tv8_A 63 AELGVKKIRITG--GEPLMRRD---------LDVLIAKLNQID-GIEDIGLTTNGLLLKKHGQKLYDAGLRRINV 125 (340)
T ss_dssp HHTTCCEEEEES--SCGGGSTT---------HHHHHHHHTTCT-TCCEEEEEECSTTHHHHHHHHHHHTCCEEEE
T ss_pred HHCCCCEEEEeC--CCccchhh---------HHHHHHHHHhCC-CCCeEEEEeCccchHHHHHHHHHCCCCEEEE
Confidence 356888877643 21 55543 346777777763 22 45566667642 467788889887754
No 140
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=78.13 E-value=13 Score=34.57 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+..+.|. .+|.++.++.+. ...+.+.. .+|++.++.++.. -+ ....+.
T Consensus 22 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 22 ALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIE----FAVKRAAG---RIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp HHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 4445666788899999988877774 699998877543 33344432 4788888877543 23 445678
Q ss_pred CCcEEEcC----CCCCHHHHHHHhC------CCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCC-CCeEEeCCCCCCC
Q 015201 309 GVDVIGLD----WTVDMADGRKRLG------NDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGS-RGHILNLGHGVLV 376 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~g------~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~-~gfIls~gc~i~~ 376 (411)
|+|++.+- +..+-+++.+.|. +--.+.=|++... ..-++|.+.+-++ ...+ -|+=-++|
T Consensus 95 Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~----~~pnivgiKds~g----- 165 (294)
T 2ehh_A 95 GADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLAS----ECENIVASKESTP----- 165 (294)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHH----HCTTEEEEEECCS-----
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHh----hCCCEEEEEeCCC-----
Confidence 99997431 1235455444431 1112233443321 2346776654432 2222 23333332
Q ss_pred CCcHHHHHHHHHHH
Q 015201 377 GTPEEAVAHFFEVG 390 (411)
Q Consensus 377 ~tp~Eni~a~~~a~ 390 (411)
+.+++..+++..
T Consensus 166 --d~~~~~~~~~~~ 177 (294)
T 2ehh_A 166 --NMDRISEIVKRL 177 (294)
T ss_dssp --CHHHHHHHHHHH
T ss_pred --CHHHHHHHHHhc
Confidence 356777777654
No 141
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=78.09 E-value=6.1 Score=35.43 Aligned_cols=132 Identities=18% Similarity=0.149 Sum_probs=69.1
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~ 315 (411)
+.++.+.++|+|.+.+.+.-+.+-. .+.. ++++.+++.. ++|++.| |.+. .++.+.+.|+|.+.+
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~--------~~~~-~~i~~i~~~~-~ipv~v~--ggI~~~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGT--------GDNR-ALIAEVAQAM-DIKVELS--GGIRDDDTLAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTS--------CCCH-HHHHHHHHHC-SSEEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEecCchhhcC--------CChH-HHHHHHHHhc-CCcEEEE--CCcCCHHHHHHHHHcCCCEEEE
Confidence 3446778899999988763221100 1122 3344444443 6787765 4332 477888899999987
Q ss_pred CCC--CC---HHHHHHHhCCCeeEEccCCcC---c-cCC------CHHHHHHHHHHHHHHhCCCCeEEeCCC--CCCCCC
Q 015201 316 DWT--VD---MADGRKRLGNDISVQGNVDPA---C-LFS------PLPALTDEIQRVVKCAGSRGHILNLGH--GVLVGT 378 (411)
Q Consensus 316 d~~--~d---i~~~~~~~g~~~~l~G~vd~~---~-L~g------t~eeV~~ev~~~i~~~~~~gfIls~gc--~i~~~t 378 (411)
... .+ +.++.+.+|.++.+ ++|+. . ..| ++.+ .++++.+ .+-+.+++++.. +...+.
T Consensus 104 g~~~l~~p~~~~~~~~~~g~~~~~--~l~~~~g~v~~~g~~~~~~~~~e---~~~~~~~-~G~~~i~~~~~~~~~~~~g~ 177 (244)
T 1vzw_A 104 GTAALETPEWVAKVIAEHGDKIAV--GLDVRGTTLRGRGWTRDGGDLYE---TLDRLNK-EGCARYVVTDIAKDGTLQGP 177 (244)
T ss_dssp CHHHHHCHHHHHHHHHHHGGGEEE--EEEEETTEECCSSSCCCCCBHHH---HHHHHHH-TTCCCEEEEEC-------CC
T ss_pred CchHhhCHHHHHHHHHHcCCcEEE--EEEccCCEEEEcCcccCCCCHHH---HHHHHHh-CCCCEEEEeccCcccccCCC
Confidence 532 12 56667777755433 34443 1 122 3333 3444444 333445554322 112345
Q ss_pred cHHHHHHHHH
Q 015201 379 PEEAVAHFFE 388 (411)
Q Consensus 379 p~Eni~a~~~ 388 (411)
.++.++.+.+
T Consensus 178 ~~~~~~~i~~ 187 (244)
T 1vzw_A 178 NLELLKNVCA 187 (244)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6677766654
No 142
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=78.08 E-value=20 Score=34.31 Aligned_cols=70 Identities=14% Similarity=0.135 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|+|.+.-..|. .+|.++.++++.= .+. +.+|++.++.++.. -+ ....+.
T Consensus 48 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-------~~~---grvpViaGvg~~st~eai~la~~A~~~ 117 (344)
T 2hmc_A 48 ALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-------LVK---AGIPVIVGTGAVNTASAVAHAVHAQKV 117 (344)
T ss_dssp HHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-------HHH---TTCCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-------HhC---CCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 3345556778899999988877764 7999998887654 233 25799988877653 23 445568
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 118 Gadavlv 124 (344)
T 2hmc_A 118 GAKGLMV 124 (344)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998753
No 143
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=77.82 E-value=41 Score=34.43 Aligned_cols=147 Identities=16% Similarity=0.091 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcC--CC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPP-HMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGT--GV 310 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp-~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~--g~ 310 (411)
.+..++.++.+++.|||.|-+. +-+..+++ +.+++ +.|.. ++.. ++|+.+-+. +...++.-.+. |.
T Consensus 339 ~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~r-vv~~i-------~~~~-~vpisIDT~-~~~v~eaal~~~~G~ 407 (566)
T 1q7z_A 339 EEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEK-IVQTL-------PYVS-NVPLSLDIQ-NVDLTERALRAYPGR 407 (566)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHH-HHHHH-------HHHT-CSCEEEECC-CHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHH-HHHHH-------HhhC-CceEEEeCC-CHHHHHHHHHhcCCC
Confidence 3666778889999999999887 32223444 34433 33333 3332 678765333 22245655555 99
Q ss_pred cEEE-cCCC----CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC----CCeEEeCCC---CCCCCC
Q 015201 311 DVIG-LDWT----VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS----RGHILNLGH---GVLVGT 378 (411)
Q Consensus 311 d~l~-~d~~----~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~----~gfIls~gc---~i~~~t 378 (411)
++++ +... ..+..+.+++|-.+++|-. +.. .-.|.+++.+..++.++.+.. ..+|+-||- +... -
T Consensus 408 ~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~-~~~-~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~~~igfgk-~ 484 (566)
T 1q7z_A 408 SLFNSAKVDEEELEMKINLLKKYGGTLIVLLM-GKD-VPKSFEERKEYFEKALKILERHDFSDRVIFDPGVLPLGAEG-K 484 (566)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCCEEEEESC-SSS-CCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCCCCTTTTC-C
T ss_pred CEEEECCcchhhHHHHHHHHHHhCCeEEEEeC-CCC-CcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCCCCcccCcH-H
Confidence 9985 3322 2345566778876777653 221 224577788888888876643 247999997 3333 3
Q ss_pred cHHHHHHHHHHHHhcCC
Q 015201 379 PEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 379 p~Eni~a~~~a~~~yg~ 395 (411)
..+-++++-+ .++.|.
T Consensus 485 ~~~~l~~~~~-~~~~g~ 500 (566)
T 1q7z_A 485 PVEVLKTIEF-ISSKGF 500 (566)
T ss_dssp HHHHHHHHHH-HHHTTC
T ss_pred HHHHHHHHHH-HHhCCC
Confidence 3443444433 444443
No 144
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=77.61 E-value=13 Score=34.93 Aligned_cols=138 Identities=12% Similarity=0.103 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++.+. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~----~~~~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 34 SYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVS----RTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 3445566788899999988887774 699998877643 33344432 5789988877543 23 445568
Q ss_pred CCcEEEcC----CCCCHHHHHHHhC---C--Ce-eEEccCCcCc-cCCCHHHHHHHHHHHHHHhCC-CCeEEeCCCCCCC
Q 015201 309 GVDVIGLD----WTVDMADGRKRLG---N--DI-SVQGNVDPAC-LFSPLPALTDEIQRVVKCAGS-RGHILNLGHGVLV 376 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~g---~--~~-~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~-~gfIls~gc~i~~ 376 (411)
|+|++.+- +..+-+++.+.|. + ++ ++.=|++... ..-++|.+.+-++ ...+ -|+--++|
T Consensus 107 Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~----~~pnIvgiKdssg----- 177 (306)
T 1o5k_A 107 GANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAA----DLKNVVGIXEANP----- 177 (306)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHH----HCTTEEEEEECCC-----
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHH----hCCCEEEEeCCCC-----
Confidence 99997431 1335555554442 1 11 2233443211 2246666654432 2222 23333332
Q ss_pred CCcHHHHHHHHHHHH
Q 015201 377 GTPEEAVAHFFEVGK 391 (411)
Q Consensus 377 ~tp~Eni~a~~~a~~ 391 (411)
+.+++..+++...
T Consensus 178 --d~~~~~~~~~~~~ 190 (306)
T 1o5k_A 178 --DIDQIDRTVSLTK 190 (306)
T ss_dssp --CHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHhcC
Confidence 2667777777655
No 145
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=77.53 E-value=28 Score=33.21 Aligned_cols=123 Identities=15% Similarity=0.202 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. + ++-.++.++...++|+|+
T Consensus 86 r~~vi~~~ve~~~grvpViaGvg~~-----------s-------------------------t~eai~la~~A~~~Gada 129 (343)
T 2v9d_A 86 RKAIARFAIDHVDRRVPVLIGTGGT-----------N-------------------------ARETIELSQHAQQAGADG 129 (343)
T ss_dssp HHHHHHHHHHHHTTSSCEEEECCSS-----------C-------------------------HHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEecCCC-----------C-------------------------HHHHHHHHHHHHhcCCCE
Confidence 3455555666677788888766442 0 233446667777889999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHh-cCCCcEEEc-CCCCCHH
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMK-GTGVDVIGL-DWTVDMA 322 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~-e~g~d~l~~-d~~~di~ 322 (411)
+.+.-++-.-.|+ +-+.-|+++|.+.. ++|++++.. |. .. .+..+. +.+ +++.+ +..-|+.
T Consensus 130 vlv~~P~Y~~~s~----~~l~~~f~~VA~a~-----~lPiilYn~P~~tg~~l~~e~~~~La~~~p-nIvgiKdssgd~~ 199 (343)
T 2v9d_A 130 IVVINPYYWKVSE----ANLIRYFEQVADSV-----TLPVMLYNFPALTGQDLTPALVKTLADSRS-NIIGIKDTIDSVA 199 (343)
T ss_dssp EEEECCSSSCCCH----HHHHHHHHHHHHTC-----SSCEEEEECHHHHSSCCCHHHHHHHHHHCT-TEEEEEECCSCHH
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCchhcCcCCCHHHHHHHHHhCC-CEEEEEeCCCCHH
Confidence 9877665433454 44566777777655 478877764 42 22 244455 543 55555 3334554
Q ss_pred H---HHHHhC---CCeeEEccCCc
Q 015201 323 D---GRKRLG---NDISVQGNVDP 340 (411)
Q Consensus 323 ~---~~~~~g---~~~~l~G~vd~ 340 (411)
. +.+..+ ++..+..|-|.
T Consensus 200 ~~~~l~~~~~~~~~~f~v~~G~D~ 223 (343)
T 2v9d_A 200 HLRSMIHTVKGAHPHFTVLCGYDD 223 (343)
T ss_dssp HHHHHHHHHHHHCTTCEEEESSGG
T ss_pred HHHHHHHhcCCCCCCEEEEECcHH
Confidence 4 333344 45655555554
No 146
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=77.33 E-value=12 Score=35.01 Aligned_cols=74 Identities=16% Similarity=0.260 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e 307 (411)
+.+.++++.+++.|+|++.+....|. .+|.++.++++. ...+.+.. .+|++.++.++.. -+ ....+
T Consensus 21 ~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 21 KALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVA----LVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHh
Confidence 34455667788899999988777764 699998877643 33344432 4789988877643 23 44556
Q ss_pred CCCcEEEc
Q 015201 308 TGVDVIGL 315 (411)
Q Consensus 308 ~g~d~l~~ 315 (411)
.|+|++.+
T Consensus 94 ~Gadavlv 101 (297)
T 2rfg_A 94 AGADAVLC 101 (297)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999754
No 147
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=77.24 E-value=46 Score=30.79 Aligned_cols=122 Identities=15% Similarity=0.191 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|+++.+++. + ++-.++.++...++|+|++
T Consensus 60 ~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 103 (293)
T 1f6k_A 60 KEIFRIAKDEAKDQIALIAQVGSV-----------N-------------------------LKEAVELGKYATELGYDCL 103 (293)
T ss_dssp HHHHHHHHHHHTTSSEEEEECCCS-----------C-------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEecCCC-----------C-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 345555666677789988766441 0 1334466777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHhcCCCcEEEc-CCCCCHHHH
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMKGTGVDVIGL-DWTVDMADG 324 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~e~g~d~l~~-d~~~di~~~ 324 (411)
.+.-++-.-.|. +=+.-|++.+.+.. +.|++++.. |. .. .+..+.+.+ +++.+ +...|+...
T Consensus 104 lv~~P~y~~~~~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiK~s~gd~~~~ 173 (293)
T 1f6k_A 104 SAVTPFYYKFSF----PEIKHYYDTIIAET-----GSNMIVYSIPFLTGVNMGIEQFGELYKNP-KVLGVKFTAGDFYLL 173 (293)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHH-----CCCEEEEECHHHHCCCCCHHHHHHHHTST-TEEEEEECSCCHHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEECccccCcCCCHHHHHHHhcCC-CEEEEEECCCCHHHH
Confidence 887665433453 55677888888876 468888774 43 22 244455543 55555 334455544
Q ss_pred HHHh--CCCeeEEccCCc
Q 015201 325 RKRL--GNDISVQGNVDP 340 (411)
Q Consensus 325 ~~~~--g~~~~l~G~vd~ 340 (411)
.+.. +++..+..|-|.
T Consensus 174 ~~~~~~~~~f~v~~G~d~ 191 (293)
T 1f6k_A 174 ERLKKAYPNHLIWAGFDE 191 (293)
T ss_dssp HHHHHHCTTSEEEECCGG
T ss_pred HHHHHhCCCeEEEECcHH
Confidence 3321 334555555554
No 148
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=77.05 E-value=29 Score=30.34 Aligned_cols=82 Identities=15% Similarity=0.167 Sum_probs=50.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW 317 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~ 317 (411)
.+.++.+.+.|+|.|.+-+...+ +..+.. +....+++-+..+.. +++++++ ..++...+.|+|.+++..
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~-~~~~~~~l~~~~~~~--~v~v~v~-----~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGD---ALTGEA-RIKFAEKAQAACREA--GVPFIVN-----DDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTT---CCCHHH-HHHHHHHHHHHHHHH--TCCEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEEecCCCC---HhHHHH-HHHHHHHHHHHHHHc--CCeEEEc-----CHHHHHHHcCCCEEEECC
Confidence 45566788899999987754433 322210 122233333333333 5677764 357888889999998743
Q ss_pred -CCCHHHHHHHhCC
Q 015201 318 -TVDMADGRKRLGN 330 (411)
Q Consensus 318 -~~di~~~~~~~g~ 330 (411)
..++.++++.+|.
T Consensus 103 ~~~~~~~~~~~~g~ 116 (227)
T 2tps_A 103 EDANAKEVRAAIGD 116 (227)
T ss_dssp TSSCHHHHHHHHTT
T ss_pred CccCHHHHHHhcCC
Confidence 3467788887774
No 149
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=76.95 E-value=7.6 Score=38.72 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=78.9
Q ss_pred HHHHHHHHhCCCEEE-EecC-CCCCCCHHHHHHHHH------------HHHHHHHHHHHhhCCCCCEEEEecCCcc--cH
Q 015201 239 DYIIYQVESGAHCIQ-IFDS-WGGQLPPHMWEQWSE------------PYIREIVSLVRTKCPETPIVLYINGNGG--FL 302 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~-i~D~-~~~~iSp~~f~ef~~------------Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l 302 (411)
+-+++..++|||.+= ++.+ +--.+||++-++.+. +-...+.+.+++. +. -.+..+|+.. .+
T Consensus 266 eda~~a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~~~v~~VgVFvn~~~~~i~~~~~~~--~l-d~vQLHG~E~~~~~ 342 (452)
T 1pii_A 266 QDAKAAYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVL--SL-AAVQLHGNEEQLYI 342 (452)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHCCCEEEEEESSCCHHHHHHHHHHH--TC-SEEEECSCCCHHHH
T ss_pred HHHHHHHhcCCCEEEeecCCCCCCCCCHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHHhc--CC-CEEEECCCCCHHHH
Confidence 446677899999863 4343 334899999988743 2334555555554 22 2556667654 34
Q ss_pred hHHhc-C--CC--------------------cEEEcCC-------CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHH
Q 015201 303 ERMKG-T--GV--------------------DVIGLDW-------TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTD 352 (411)
Q Consensus 303 ~~~~e-~--g~--------------------d~l~~d~-------~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ 352 (411)
..+.. + ++ |.+-+|. ..|...++...+....+.||++| |.|.+
T Consensus 343 ~~l~~~~p~~~~iika~~v~~~~~~~~~~~~d~~LlD~~~GGtG~~fdW~~l~~~~~~p~iLAGGL~p-------~NV~~ 415 (452)
T 1pii_A 343 DTLREALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGA-------DNCVE 415 (452)
T ss_dssp HHHHHHSCTTSEEEEEEECSSSCCCCCCTTCCEEEEESCSCCSSCCCCGGGGTTSCCTTEEEESSCCT-------TTHHH
T ss_pred HHHHhhccCCCcEEEEEecCCccchhhhhcccEEEecCCCCCCCCccCHHHhhcccCCcEEEEcCCCH-------HHHHH
Confidence 44432 1 12 2222221 11332222211223444555544 44544
Q ss_pred HHHHHHHHhCCCCeEEeCCCCCCCCC-cHHHHHHHHHHHHhc
Q 015201 353 EIQRVVKCAGSRGHILNLGHGVLVGT-PEEAVAHFFEVGKSM 393 (411)
Q Consensus 353 ev~~~i~~~~~~gfIls~gc~i~~~t-p~Eni~a~~~a~~~y 393 (411)
.+ + .++.|.=+|+|-...||. +++.|++|+++++.|
T Consensus 416 ai----~-~~p~gvDvsSGVE~~pG~KD~~ki~~f~~~~r~~ 452 (452)
T 1pii_A 416 AA----Q-TGCAGLDFNSAVESQPGIKDARLLASVFQTLRAY 452 (452)
T ss_dssp HH----T-TCCSEEEECGGGEEETTEECHHHHHHHHHHHHCC
T ss_pred HH----h-cCCCEEEeCCceeCCCCCCCHHHHHHHHHHHhhC
Confidence 43 3 466788888887765564 889999999999876
No 150
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=76.91 E-value=45 Score=31.31 Aligned_cols=123 Identities=19% Similarity=0.256 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|+++.+++. -++-.++.++...++|+|+
T Consensus 66 r~~v~~~~~~~~~grvpviaGvg~~------------------------------------~t~~ai~la~~a~~~Gada 109 (318)
T 3qfe_A 66 RAQLIATARKAVGPDFPIMAGVGAH------------------------------------STRQVLEHINDASVAGANY 109 (318)
T ss_dssp HHHHHHHHHHHHCTTSCEEEECCCS------------------------------------SHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHhCCCCcEEEeCCCC------------------------------------CHHHHHHHHHHHHHcCCCE
Confidence 3455555667777889988876442 0133456666777889999
Q ss_pred EEEecCC-CC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-c-c------cHhHHhc-CCCcEEEc-CCCC
Q 015201 252 IQIFDSW-GG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-G-G------FLERMKG-TGVDVIGL-DWTV 319 (411)
Q Consensus 252 i~i~D~~-~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~-~------~l~~~~e-~g~d~l~~-d~~~ 319 (411)
+.+.-+. -. -.|+ +-+.-|++.+.+.. ++|++++.+-. + . .+..+.+ .+ +++.+ +...
T Consensus 110 vlv~~P~y~~kp~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~t~g~~l~~~~~~~La~~~p-nIvgiKdssg 179 (318)
T 3qfe_A 110 VLVLPPAYFGKATTP----PVIKSFFDDVSCQS-----PLPVVIYNFPGVCNGIDLDSDMITTIARKNP-NVVGVKLTCA 179 (318)
T ss_dssp EEECCCCC---CCCH----HHHHHHHHHHHHHC-----SSCEEEEECCC----CCCCHHHHHHHHHHCT-TEEEEEESSC
T ss_pred EEEeCCcccCCCCCH----HHHHHHHHHHHhhC-----CCCEEEEeCCcccCCCCCCHHHHHHHHhhCC-CEEEEEeCCC
Confidence 8775552 11 1333 45566778887765 46887776632 1 1 1334444 43 56555 3344
Q ss_pred CHHHH---HHHhC-CCeeEEccCCc
Q 015201 320 DMADG---RKRLG-NDISVQGNVDP 340 (411)
Q Consensus 320 di~~~---~~~~g-~~~~l~G~vd~ 340 (411)
|+... .+.++ ++..+..|-|.
T Consensus 180 d~~~~~~~~~~~~~~~f~v~~G~d~ 204 (318)
T 3qfe_A 180 SVGKITRLAATLPPAAFSVFGGQSD 204 (318)
T ss_dssp CHHHHHHHHHHSCGGGCEEEESCGG
T ss_pred CHHHHHHHHHhcCCCCEEEEEecHH
Confidence 65544 33343 44555555554
No 151
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=76.87 E-value=42 Score=30.22 Aligned_cols=162 Identities=10% Similarity=0.009 Sum_probs=93.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCC---C-CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 222 APHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQ---L-PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 222 ~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~---i-Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
+|+...+.++ .+.+.++...+.|++.|.+.-.++.. . +.+...+.+...++++.+.++++ |+.+.+|.++
T Consensus 95 d~~~r~~~~~----~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~~ 168 (287)
T 3kws_A 95 DPAIRKECMD----TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQH--GTSVIFEPLN 168 (287)
T ss_dssp SHHHHHHHHH----HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHT--TCCEEECCCC
T ss_pred CHHHHHHHHH----HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEecC
Confidence 5555444443 44455667778899998775444332 1 45666677889999999999987 7889999774
Q ss_pred C----c----c-cHhHHhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeEEccCCc-C-ccCCCHH---HHHHHHH
Q 015201 298 N----G----G-FLERMKGTGVDV--IGLD------WTVDMADGRKRLGNDISVQGNVDP-A-CLFSPLP---ALTDEIQ 355 (411)
Q Consensus 298 ~----~----~-~l~~~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~G~vd~-~-~L~gt~e---eV~~ev~ 355 (411)
. . . .++.+.+.+-+. +.+| ...|+.+.-+++++++..+=-=|. . ...|+-+ +. ..+.
T Consensus 169 ~~~~~~~~~~~~~~~ll~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHlkD~~~r~~pG~G~d~id~-~~i~ 247 (287)
T 3kws_A 169 RKECFYLRQVADAASLCRDINNPGVRCMGDFWHMTWEETSDMGAFISGGEYLQHVHVASRKRRSMPGEDGDADNY-INGF 247 (287)
T ss_dssp TTTCSSCCCHHHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTTSCSTTTTGGGCCC-HHHH
T ss_pred cccCcccCCHHHHHHHHHHcCCCCeeEEeehHHHHhcCCCHHHHHHHhhhhEEEEEeCCCCCCCCCCCCCCCcCH-HHHH
Confidence 1 1 1 124444455332 3333 245888887878876544211122 1 1224333 23 3455
Q ss_pred HHHHHhCC-CCeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 356 RVVKCAGS-RGHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 356 ~~i~~~~~-~gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+.|+..+- |-+++-.- +.+.|.+.++.-++..+++
T Consensus 248 ~~L~~~gy~g~i~lE~~---~~~~~~~~~~~s~~~l~~~ 283 (287)
T 3kws_A 248 KGLKMIGYNNYVSFECG---CQGDRNVVVPAAVKLLREQ 283 (287)
T ss_dssp HHHHHTTCCSEEEECCC---CSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccEEEEec---CCCCHHHHHHHHHHHHHHH
Confidence 55666554 44444432 2245677777777776654
No 152
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=76.82 E-value=9.3 Score=35.60 Aligned_cols=92 Identities=13% Similarity=0.087 Sum_probs=55.9
Q ss_pred HHHHHHHHHhCCCEEEEecCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCcc-cHhHHhcCCCc
Q 015201 238 ADYIIYQVESGAHCIQIFDSW-GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNGG-FLERMKGTGVD 311 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~-~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~~-~l~~~~e~g~d 311 (411)
.+.++.+.++|+|+|.++--. .+-+..+ ..+++++..+ +.++.+|-- -+.. -+++++++|++
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~~--------~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lGvd 181 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDKE--------LCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLGFE 181 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCHH--------HHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCHH--------HHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcCCC
Confidence 344566788999999876311 1234443 4455666554 467888974 2223 47999999999
Q ss_pred EEEcCC-----CCC---HHHHHHHhCCCeeEE--ccCCcC
Q 015201 312 VIGLDW-----TVD---MADGRKRLGNDISVQ--GNVDPA 341 (411)
Q Consensus 312 ~l~~d~-----~~d---i~~~~~~~g~~~~l~--G~vd~~ 341 (411)
.+-... ... +.++.+..++++.|+ |||++.
T Consensus 182 rILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~~ 221 (287)
T 3iwp_A 182 RVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITDR 221 (287)
T ss_dssp EEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCTT
T ss_pred EEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCHH
Confidence 873311 112 455556667776554 778773
No 153
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=76.73 E-value=24 Score=33.13 Aligned_cols=142 Identities=16% Similarity=0.193 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHH-HHHHHHHHHHHhhCCCCCEEEEec-CCc-ccHhHHhcC----
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSE-PYIREIVSLVRTKCPETPIVLYIN-GNG-GFLERMKGT---- 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~-Py~k~i~~~i~~~~~g~~~~~H~C-G~~-~~l~~~~e~---- 308 (411)
.+...+++..+.+..+|.- +|+... +|.. .+..-+....++. ++|+.+|.+ |.. ..+..-++.
T Consensus 39 ~~~Avl~AAee~~sPvIlq-------~s~g~~-~y~g~~~~~~~~~~A~~~--~VPVaLHlDHg~~~e~i~~ai~~~~~~ 108 (306)
T 3pm6_A 39 GILAIIRAAEHKRSPAMIL-------LFPWAI-QYADSLLVRTAASACRAA--SVPITLHLDHAQDPEIIKRAADLSRSE 108 (306)
T ss_dssp HHHHHHHHHHHTTCCEEEE-------ECHHHH-HHHTTHHHHHHHHHHHHC--SSCEEEEEEEECCHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHhCCCEEEE-------cChhHH-hhccHHHHHHHHHHHHHC--CCCEEEEcCCCCCHHHHHHHHHhhhhc
Confidence 3345555677788888742 333322 1211 2222233344444 799999997 433 256666677
Q ss_pred ----CCcEEEcCCC-CC----HHHHHHHh----CCCeeE------EccC----Cc----CccCCCHHHHHHHHHHHHHHh
Q 015201 309 ----GVDVIGLDWT-VD----MADGRKRL----GNDISV------QGNV----DP----ACLFSPLPALTDEIQRVVKCA 361 (411)
Q Consensus 309 ----g~d~l~~d~~-~d----i~~~~~~~----g~~~~l------~G~v----d~----~~L~gt~eeV~~ev~~~i~~~ 361 (411)
|++.+.+|-. .+ +...++.. .-.+++ .||- +. ..++-+|||+.+-++.-++.+
T Consensus 109 ~~~~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~L 188 (306)
T 3pm6_A 109 THEPGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWL 188 (306)
T ss_dssp ---CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEE
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEE
Confidence 9999888743 23 33333322 111233 1221 11 124678999988773111111
Q ss_pred CCCCeEEeCCCCCC----CCCcHHHHHHHHHHH
Q 015201 362 GSRGHILNLGHGVL----VGTPEEAVAHFFEVG 390 (411)
Q Consensus 362 ~~~gfIls~gc~i~----~~tp~Eni~a~~~a~ 390 (411)
-.-+++.|++- +...++.++.+-+.+
T Consensus 189 ---AvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v 218 (306)
T 3pm6_A 189 ---APAFGNVHGNYGPRGVQLDYERLQRINEAV 218 (306)
T ss_dssp ---CCCSSCCSSCCCTTCCCCCHHHHHHHHHHH
T ss_pred ---EEEcCccccCcCCCCCccCHHHHHHHHHHh
Confidence 12234456653 446778888877765
No 154
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=76.72 E-value=10 Score=35.65 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+.. .+|++.++.++.. -+ ....+.
T Consensus 38 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 38 AGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLK----AVREEVGD---RAKLIAGVGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHH----HHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEecCCCCCHHHHHHHHHHHHhc
Confidence 3345566778899999988887774 799998877543 33344432 4788888877543 23 455678
Q ss_pred CCcEEE
Q 015201 309 GVDVIG 314 (411)
Q Consensus 309 g~d~l~ 314 (411)
|+|++.
T Consensus 111 Gadavl 116 (304)
T 3cpr_A 111 GADGLL 116 (304)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 999974
No 155
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=76.67 E-value=19 Score=34.35 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=74.5
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe--cC----Ccc--------------
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI--NG----NGG-------------- 300 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~--CG----~~~-------------- 300 (411)
.+..++.|||++.+.=-++.- .+...++--..++.++.+.+++. |.|+++.+ -+ +..
T Consensus 116 ve~a~~~GADAVk~lv~~g~d-~~~e~~~~q~~~l~rv~~ec~~~--GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~ 192 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVD-GDPQVNVQKQAYIERIGSECQAE--DIPFFLEILTYDETISNNSSVEFAKVKVHKVND 192 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTT-SCHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCC-chHHHHHHHHHHHHHHHHHHHHc--CCceEEEEeccCCCCCCCcchhhhccCHHHHHH
Confidence 456778999998766555542 33345566678899999999998 79988744 22 111
Q ss_pred cHhHH--hcCCCcEEEcCCCCCH---------------HHHHHHhC-------CCee-EEccCCcCccCCCHHHHHHHHH
Q 015201 301 FLERM--KGTGVDVIGLDWTVDM---------------ADGRKRLG-------NDIS-VQGNVDPACLFSPLPALTDEIQ 355 (411)
Q Consensus 301 ~l~~~--~e~g~d~l~~d~~~di---------------~~~~~~~g-------~~~~-l~G~vd~~~L~gt~eeV~~ev~ 355 (411)
.+..+ .++|+|++=+....|+ +++.+.|. -..+ +.||+ +.++..+.++
T Consensus 193 a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-------~~~~fl~~v~ 265 (332)
T 3iv3_A 193 AMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-------SAELFQETLV 265 (332)
T ss_dssp HHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-------CHHHHHHHHH
T ss_pred HHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-------CHHHHHHHHH
Confidence 12344 4679999976654444 34433231 1122 23443 4678888888
Q ss_pred HHHHHhCC-CCeEEe
Q 015201 356 RVVKCAGS-RGHILN 369 (411)
Q Consensus 356 ~~i~~~~~-~gfIls 369 (411)
..++.+++ .|+.++
T Consensus 266 ~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 266 FAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHTCCCCEEEEC
T ss_pred HHHHcCCCcceEEee
Confidence 88888764 566653
No 156
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=76.60 E-value=15 Score=35.49 Aligned_cols=95 Identities=18% Similarity=0.205 Sum_probs=57.2
Q ss_pred HHHHHHHHHhhCCCCCEEEEecC-Cc--ccHhHHhcCCCc---E-E-EcCCCCCHHHHHHHh---CCCeeEEccCCcCcc
Q 015201 275 IREIVSLVRTKCPETPIVLYING-NG--GFLERMKGTGVD---V-I-GLDWTVDMADGRKRL---GNDISVQGNVDPACL 343 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG-~~--~~l~~~~e~g~d---~-l-~~d~~~di~~~~~~~---g~~~~l~G~vd~~~L 343 (411)
++.-++..++. |.|+++|+-- .. ..++.+.+.|++ + + +.+...|+..+++.+ |-.+.|-|.+- . -
T Consensus 171 f~aq~~~A~e~--glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~~-~-~ 246 (363)
T 3ovg_A 171 LEVAARTSILT--GCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDR-V-K 246 (363)
T ss_dssp HHHHHHHHHHH--CCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTC-T-T
T ss_pred HHHHHHHHHHh--CCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCeec-c-c
Confidence 34445555555 7899999742 11 245777776665 2 2 444445776666644 76666655321 0 0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEeCCCC
Q 015201 344 FSPLPALTDEIQRVVKCAGSRGHILNLGHG 373 (411)
Q Consensus 344 ~gt~eeV~~ev~~~i~~~~~~gfIls~gc~ 373 (411)
+.+.++-.+.++++++......+++++++.
T Consensus 247 ~~~~~~ra~~l~~lv~~~p~drILleTDap 276 (363)
T 3ovg_A 247 YYPDSLLAENIKYLVDKGLQKHITLSLDAG 276 (363)
T ss_dssp TCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred cCChhHHHHHHHHHHHhcCCCeEEEeCCCC
Confidence 123444556777777776557999999986
No 157
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=76.51 E-value=29 Score=33.48 Aligned_cols=102 Identities=10% Similarity=0.118 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCH-------------HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWG----GQLPP-------------HMWEQWSEPYIREIVSLVRTKCPETPIVLYI 295 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp-------------~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~ 295 (411)
+.+...+.++...++|.|+|-+.-.-+ .|+|| +.=-+|. .++++.+++..+..|+.+-+
T Consensus 164 ~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~----~eiv~aVr~avg~~~v~vrl 239 (377)
T 2r14_A 164 IVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFP----LEVVDAVAEVFGPERVGIRL 239 (377)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHH----HHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHH----HHHHHHHHHHcCCCcEEEEe
Confidence 334444556677889999998753221 12333 2222344 45555555543212677765
Q ss_pred cCC----------c-c----cHhHHhcCCCcEEEcCCC----------CC-HHHHHHHhCCCeeEEccC
Q 015201 296 NGN----------G-G----FLERMKGTGVDVIGLDWT----------VD-MADGRKRLGNDISVQGNV 338 (411)
Q Consensus 296 CG~----------~-~----~l~~~~e~g~d~l~~d~~----------~d-i~~~~~~~g~~~~l~G~v 338 (411)
... . . +...+.+.|+|.+++... .+ +.++++.++..++..|++
T Consensus 240 s~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi 308 (377)
T 2r14_A 240 TPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY 308 (377)
T ss_dssp CTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC
Confidence 321 1 1 135566789999976431 12 456777776545555654
No 158
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=75.77 E-value=10 Score=35.68 Aligned_cols=72 Identities=13% Similarity=0.048 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++.+. ..++.+. +.+|++.|+.++.. -+ ....+.
T Consensus 29 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~ 101 (311)
T 3h5d_A 29 AIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFA----AVQKVVN---GRVPLIAGVGTNDTRDSIEFVKEVAEF 101 (311)
T ss_dssp HHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHH----HHHHHSC---SSSCEEEECCCSSHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHhc
Confidence 3345566778999999988887774 799988777543 2233332 35799998877543 23 455567
Q ss_pred CC-cEEE
Q 015201 309 GV-DVIG 314 (411)
Q Consensus 309 g~-d~l~ 314 (411)
|. |++.
T Consensus 102 Ga~davl 108 (311)
T 3h5d_A 102 GGFAAGL 108 (311)
T ss_dssp CCCSEEE
T ss_pred CCCcEEE
Confidence 86 9874
No 159
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=75.57 E-value=31 Score=33.11 Aligned_cols=104 Identities=15% Similarity=0.203 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC----CCCCHH------HH---HHHHHHHHHHHHHHHHhhCCCCCEEEEecCC--c
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG----GQLPPH------MW---EQWSEPYIREIVSLVRTKCPETPIVLYINGN--G 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~------~f---~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~--~ 299 (411)
+...+.++...++|.|+|-+.-.-+ .|+||. .| -+-=.-+..++++.+++..|..++.+-+... .
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 3444556677889999998754321 122331 00 0111234456666666664312676633221 1
Q ss_pred --------c------cHhHHhcCCCcEEEcCCC-------CC---HHHHHHHhCCCeeEEccC
Q 015201 300 --------G------FLERMKGTGVDVIGLDWT-------VD---MADGRKRLGNDISVQGNV 338 (411)
Q Consensus 300 --------~------~l~~~~e~g~d~l~~d~~-------~d---i~~~~~~~g~~~~l~G~v 338 (411)
. +...+.+.|+|.+++... .+ +.++++.++..++..|++
T Consensus 241 ~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi 303 (364)
T 1vyr_A 241 QNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY 303 (364)
T ss_dssp TTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC
T ss_pred ccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc
Confidence 1 135566789999976431 12 345677776545555655
No 160
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=75.47 E-value=50 Score=30.37 Aligned_cols=155 Identities=13% Similarity=-0.021 Sum_probs=96.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc---------------
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG--------------- 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~--------------- 299 (411)
+.+.+.++...+.|++.|.+.. ...-.+++.|+ .+...++++.+.++++ |+.+.+|.+...
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~~~~~-~~~~~l~~l~~~a~~~--Gv~l~lEn~~~~~~~~~~~~~~~~~~~ 189 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPS-LPRIENEDDAK-VVSEIFNRAGEITKKA--GILWGYHNHSNEFKRVLKAGEKPEQNP 189 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECC-CCCCSSHHHHH-HHHHHHHHHHHHHHTT--TCEEEEECCSGGGSEECCTTCCCC---
T ss_pred HHHHHHHHHHHHcCCCEEEeCC-CCCCCCHHHHH-HHHHHHHHHHHHHHHc--CCEEEEecCcccccccccccccccccc
Confidence 3445566667788999987642 11235677775 4568999999999987 788889887531
Q ss_pred -------c--cHhHHh-cCCCcE--EEcC------CCCCHHHHHHHhCCCeeEEccCCcCccCC-CHHHHHHHHHHHHHH
Q 015201 300 -------G--FLERMK-GTGVDV--IGLD------WTVDMADGRKRLGNDISVQGNVDPACLFS-PLPALTDEIQRVVKC 360 (411)
Q Consensus 300 -------~--~l~~~~-e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~G~vd~~~L~g-t~eeV~~ev~~~i~~ 360 (411)
. .++.+. +.+-+. +.+| ...|+.+..+++++++..+=-=| ....| +-+-=.+.+.+.++.
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~vg~~lD~~H~~~~g~d~~~~i~~~~~ri~~vHlkD-~~~~G~~G~id~~~i~~~L~~ 268 (305)
T 3obe_A 190 NPWAPPKGTYIEELFLKNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLLHIKD-RWIIGDSGMMNFPNIFKKAYE 268 (305)
T ss_dssp -----CCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHSTTTEEEEEECC-SSSTTCSSSBCHHHHHHHHHH
T ss_pred cccccCCChHHHHHHHHhCCcccEEEEEeHHHHHHcCCCHHHHHHHhhCceeEEEecc-CcCCCCCCccCHHHHHHHHHH
Confidence 1 255553 455442 3333 24588898898998765431112 22235 332223445556666
Q ss_pred hCCCCeEEeCCCCCC-CCCcHHHHHHHHHHHHhcCC
Q 015201 361 AGSRGHILNLGHGVL-VGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 361 ~~~~gfIls~gc~i~-~~tp~Eni~a~~~a~~~yg~ 395 (411)
.+-.|+|+-... .| .+.|.+.++.-++..+++|.
T Consensus 269 ~gy~G~iiE~~~-~~~~~~~~~~~~~s~~~L~~~~~ 303 (305)
T 3obe_A 269 IGILGYYVELEG-DKKGRTQFEGVEKSAAYLQAAPF 303 (305)
T ss_dssp HTCCEEEECCCC-CSSSCCHHHHHHHHHHHHHHCTT
T ss_pred cCCCEEEEEecC-CcCCCCHHHHHHHHHHHHHHcCC
Confidence 654567755432 23 34588999999999999874
No 161
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=75.40 E-value=10 Score=35.35 Aligned_cols=86 Identities=13% Similarity=0.172 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ...+.+.. .+|++.+..++.. -+ ....+.
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pvi~Gvg~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 23 KLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIK----FVIDKVNK---RIPVIAGTGSNNTAASIAMSKWAESI 95 (291)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHhc
Confidence 4445666788899999988887774 699998877543 33344432 4789988877643 23 455678
Q ss_pred CCcEEEcC----CCCCHHHHHHHh
Q 015201 309 GVDVIGLD----WTVDMADGRKRL 328 (411)
Q Consensus 309 g~d~l~~d----~~~di~~~~~~~ 328 (411)
|+|++.+- +..+-+++.+.|
T Consensus 96 Gadavlv~~P~y~~~s~~~l~~~f 119 (291)
T 3a5f_A 96 GVDGLLVITPYYNKTTQKGLVKHF 119 (291)
T ss_dssp TCSEEEEECCCSSCCCHHHHHHHC
T ss_pred CCCEEEEcCCCCCCCCHHHHHHHH
Confidence 99998431 134666666655
No 162
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=75.36 E-value=18 Score=33.15 Aligned_cols=79 Identities=20% Similarity=0.300 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHH---------HHHHHHHHHHHHhhCCCCCEEEEecCC-------c
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWS---------EPYIREIVSLVRTKCPETPIVLYINGN-------G 299 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~---------~Py~k~i~~~i~~~~~g~~~~~H~CG~-------~ 299 (411)
..+.++.+.++|+|.|-+.-+... ++....-.+-. ....-++++.+++.+.++|+++-..-+ .
T Consensus 33 ~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~ 112 (268)
T 1qop_A 33 SLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGID 112 (268)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHH
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHH
Confidence 356788888999999988666543 33332222111 122335666676662367865422111 1
Q ss_pred ccHhHHhcCCCcEEEc
Q 015201 300 GFLERMKGTGVDVIGL 315 (411)
Q Consensus 300 ~~l~~~~e~g~d~l~~ 315 (411)
.+++.+.+.|+|++.+
T Consensus 113 ~~~~~~~~aGadgii~ 128 (268)
T 1qop_A 113 AFYARCEQVGVDSVLV 128 (268)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 2467788899997754
No 163
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=75.35 E-value=32 Score=33.80 Aligned_cols=85 Identities=6% Similarity=0.110 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCH--------------HHHHHHHHHHHHHHHHHHHhh-CCCCCEE
Q 015201 232 HLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPP--------------HMWEQWSEPYIREIVSLVRTK-CPETPIV 292 (411)
Q Consensus 232 ~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp--------------~~f~ef~~Py~k~i~~~i~~~-~~g~~~~ 292 (411)
.+.+...+.++...++|.|+|-+.-.-+ .|+|| +.=-+|...-++.+.+.+.+. +++.|+.
T Consensus 167 ~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~ 246 (419)
T 3l5a_A 167 SIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILG 246 (419)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEE
Confidence 3334444556677899999998875432 14444 222356666666666666432 3356777
Q ss_pred EEecCC---------c-c----cHhHHhc-CCCcEEEcC
Q 015201 293 LYINGN---------G-G----FLERMKG-TGVDVIGLD 316 (411)
Q Consensus 293 ~H~CG~---------~-~----~l~~~~e-~g~d~l~~d 316 (411)
+-+... . . ++..+.+ .|+|.|++.
T Consensus 247 vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs 285 (419)
T 3l5a_A 247 FRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIA 285 (419)
T ss_dssp EEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEEC
T ss_pred EecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEe
Confidence 665431 1 1 2366778 999999763
No 164
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=75.25 E-value=18 Score=33.79 Aligned_cols=136 Identities=11% Similarity=-0.007 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++++....|. .+|.++.++++. ..++.+. +.+|++.++.++.. -+ ....+.
T Consensus 26 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~ 98 (300)
T 3eb2_A 26 VMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVR----ATIEAAQ---RRVPVVAGVASTSVADAVAQAKLYEKL 98 (300)
T ss_dssp HHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHH----HHHHHHT---TSSCBEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHH----HHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 3445566788899999977766664 799998877654 3334443 25789988876543 23 455678
Q ss_pred CCcEEEc---C-CCCCHHHHHHHh-------CCCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCC-CCeEEeCCCCCC
Q 015201 309 GVDVIGL---D-WTVDMADGRKRL-------GNDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGS-RGHILNLGHGVL 375 (411)
Q Consensus 309 g~d~l~~---d-~~~di~~~~~~~-------g~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~-~gfIls~gc~i~ 375 (411)
|+|++.+ - +..+-+++.+.| +-. .+.=|++... ..-++|.+.+ + ....+ -|+--++|
T Consensus 99 Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lP-iilYn~P~~tg~~l~~~~~~~----L-a~~pnIvgiKdssg---- 168 (300)
T 3eb2_A 99 GADGILAILEAYFPLKDAQIESYFRAIADAVEIP-VVIYTNPQFQRSDLTLDVIAR----L-AEHPRIRYIKDAST---- 168 (300)
T ss_dssp TCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSC-EEEEECTTTCSSCCCHHHHHH----H-HTSTTEEEEEECSS----
T ss_pred CCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCC-EEEEECccccCCCCCHHHHHH----H-HcCCCEEEEEcCCC----
Confidence 9999743 1 133444443333 322 2344554432 3346665533 2 22222 23333332
Q ss_pred CCCcHHHHHHHHHHHH
Q 015201 376 VGTPEEAVAHFFEVGK 391 (411)
Q Consensus 376 ~~tp~Eni~a~~~a~~ 391 (411)
+.+++..+++...
T Consensus 169 ---d~~~~~~~~~~~~ 181 (300)
T 3eb2_A 169 ---NTGRLLSIINRCG 181 (300)
T ss_dssp ---BHHHHHHHHHHHG
T ss_pred ---CHHHHHHHHHHcC
Confidence 3567777776654
No 165
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=75.22 E-value=23 Score=31.01 Aligned_cols=123 Identities=17% Similarity=0.143 Sum_probs=67.5
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCCC--
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDWT-- 318 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~-- 318 (411)
++...++|+|++.+.... .+.+.. + .+. ++.. +..+|.+........+.|+|.+.++..
T Consensus 81 ~~~a~~~gad~v~l~~~~---~~~~~~--------~----~~~---~~~~-ig~sv~t~~~~~~a~~~gaD~i~~~~~f~ 141 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSGS---FSPKQI--------R----ARF---PHLH-IGRSVHSLEEAVQAEKEDADYVLFGHVFE 141 (221)
T ss_dssp HHHHHTTTCCEEEECTTS---CCHHHH--------H----HHC---TTCE-EEEEECSHHHHHHHHHTTCSEEEEECCC-
T ss_pred HHHHHHcCCCEEEeCCCc---cCHHHH--------H----HHC---CCCE-EEEEcCCHHHHHHHHhCCCCEEEECCccc
Confidence 355678899999885321 222221 1 121 1333 334665433445556789998855321
Q ss_pred ---------CCHHHHH---HHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHH
Q 015201 319 ---------VDMADGR---KRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHF 386 (411)
Q Consensus 319 ---------~di~~~~---~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~ 386 (411)
.++..++ +...-.+...|||++ + .+.++++ .|..++.++++-.-.++ |.+.++++
T Consensus 142 ~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI~~-------~----nv~~~~~-~Ga~gv~vgs~i~~~~d-~~~~~~~~ 208 (221)
T 1yad_A 142 TDCKKGLEGRGVSLLSDIKQRISIPVIAIGGMTP-------D----RLRDVKQ-AGADGIAVMSGIFSSAE-PLEAARRY 208 (221)
T ss_dssp ---------CHHHHHHHHHHHCCSCEEEESSCCG-------G----GHHHHHH-TTCSEEEESHHHHTSSS-HHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHHHHhCCCCEEEECCCCH-------H----HHHHHHH-cCCCEEEEhHHhhCCCC-HHHHHHHH
Confidence 1233333 334445677888865 2 3344555 34456666665221223 68899999
Q ss_pred HHHHHhcCC
Q 015201 387 FEVGKSMKY 395 (411)
Q Consensus 387 ~~a~~~yg~ 395 (411)
.+++++.++
T Consensus 209 ~~~~~~~~~ 217 (221)
T 1yad_A 209 SRKLKEMRY 217 (221)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhhh
Confidence 998887664
No 166
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=75.08 E-value=38 Score=31.26 Aligned_cols=125 Identities=12% Similarity=0.121 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+..+++++++.++|+|.+-+.- +-.--||.-|+.+....++.+.+..++. |+|++- .-=+...++.+.++ ++.+-
T Consensus 52 e~a~~~a~~~k~~ga~~~k~~~-~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~t-e~~d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 52 EQVREAALAVKEAGAHMLRGGA-FKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVT-EVLDPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp HHHHHHHHHHHHHTCSEEECBS-SCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEE-ECCCGGGHHHHHHH-CSEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeEE-EeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEE-ecCCHHHHHHHHHh-CCeEE
Confidence 3445667778889999864321 1100022212222245566666777777 677542 22233357778888 89886
Q ss_pred cCC--CCCHHHHHH--HhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeC
Q 015201 315 LDW--TVDMADGRK--RLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNL 370 (411)
Q Consensus 315 ~d~--~~di~~~~~--~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~ 370 (411)
+.. ..+..-+++ ..|..+.+--| ..+|.+|+...+..+... |...++|.-
T Consensus 127 Igs~~~~n~~ll~~~a~~~kPV~lk~G-----~~~t~~ei~~Ave~i~~~-Gn~~i~L~~ 180 (276)
T 1vs1_A 127 IGARNMQNFPLLREVGRSGKPVLLKRG-----FGNTVEELLAAAEYILLE-GNWQVVLVE 180 (276)
T ss_dssp ECGGGTTCHHHHHHHHHHTCCEEEECC-----TTCCHHHHHHHHHHHHHT-TCCCEEEEE
T ss_pred ECcccccCHHHHHHHHccCCeEEEcCC-----CCCCHHHHHHHHHHHHHc-CCCeEEEEe
Confidence 642 234433332 34543333222 225889999988887664 444677755
No 167
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=74.65 E-value=13 Score=34.55 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHh---HHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLE---RMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~---~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++.+. ..++.+.. .+|++.++.++.. -++ ...+.
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 95 (292)
T 2ojp_A 23 SLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVM----MTLDLADG---RIPVIAGTGANATAEAISLTQRFNDS 95 (292)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhc
Confidence 3445666788899999988887774 699998877543 33344432 4789988877543 244 44568
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 96 Gadavlv 102 (292)
T 2ojp_A 96 GIVGCLT 102 (292)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 9999743
No 168
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=74.35 E-value=47 Score=31.16 Aligned_cols=73 Identities=14% Similarity=0.145 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCc-ccHhHHhcCCCcEE
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNG-GFLERMKGTGVDVI 313 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~-~~l~~~~e~g~d~l 313 (411)
.+...+++..+.+..+|. .+|+...+-...+++..++..+.+. ++|+.+|.+ |.. ..+..-++.|+..+
T Consensus 29 ~~~Ail~AAee~~sPvIl-------q~s~g~~~y~g~~~~~~~v~~~a~~--~VPValHlDHg~~~e~~~~ai~~GFtSV 99 (305)
T 1rvg_A 29 FLQAVLEAAEEQRSPVIL-------ALSEGAMKYGGRALTLMAVELAKEA--RVPVAVHLDHGSSYESVLRALRAGFTSV 99 (305)
T ss_dssp HHHHHHHHHHHTTCCEEE-------EEEHHHHHHHHHHHHHHHHHHHHHC--SSCEEEEEEEECSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHhCCCEEE-------ECChhHHhhCCHHHHHHHHHHHHhC--CCcEEEECCCCCCHHHHHHHHHcCCCee
Confidence 334455567777888874 3455443323345666666666552 799999997 433 24566668899999
Q ss_pred EcCC
Q 015201 314 GLDW 317 (411)
Q Consensus 314 ~~d~ 317 (411)
.+|.
T Consensus 100 MiDg 103 (305)
T 1rvg_A 100 MIDK 103 (305)
T ss_dssp EECC
T ss_pred eeCC
Confidence 8874
No 169
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=74.15 E-value=21 Score=36.35 Aligned_cols=144 Identities=14% Similarity=0.221 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC-----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-----CCc-----
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG-----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-----GNG----- 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~-----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-----G~~----- 299 (411)
+-.+++++++.++|++.|-++-+.+ .+++++.|+. ++++.+.+ ++..+..... |..
T Consensus 47 edKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~-----lr~l~~~~----~~~~l~~L~R~~N~~G~~~ypdd 117 (539)
T 1rqb_A 47 EDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWER-----LRTFRKLM----PNSRLQMLLRGQNLLGYRHYNDE 117 (539)
T ss_dssp GGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHH-----HHHHHHHC----TTSCEEEEECGGGTTSSSCCCHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHH-----HHHHHHhC----CCCEEEEEeccccccCcccCccc
Confidence 3445667788889999886653322 2556766543 23333332 3566666654 321
Q ss_pred --c-cHhHHhcCCCcEEEc-CCCCCHHH------HHHHhCCCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEE
Q 015201 300 --G-FLERMKGTGVDVIGL-DWTVDMAD------GRKRLGNDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHIL 368 (411)
Q Consensus 300 --~-~l~~~~e~g~d~l~~-d~~~di~~------~~~~~g~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIl 368 (411)
. .++...+.|++++.+ +...|+.. ..+..|. .+.|.++...- .-+++.+.+.++++.+.+. .++
T Consensus 118 v~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~--~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga---d~I 192 (539)
T 1rqb_A 118 VVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGK--HAQGTICYTISPVHTVEGYVKLAGQLLDMGA---DSI 192 (539)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC--EEEEEEECCCSTTCCHHHHHHHHHHHHHTTC---SEE
T ss_pred ccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCC--eEEEEEEeeeCCCCCHHHHHHHHHHHHHcCC---CEE
Confidence 1 357777899999975 33333322 2234463 45555654322 3588888888888877632 344
Q ss_pred eCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 369 NLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+...++. ...|..+..+++++++.
T Consensus 193 ~L~DT~G-~~~P~~v~~lv~~l~~~ 216 (539)
T 1rqb_A 193 ALKDMAA-LLKPQPAYDIIKAIKDT 216 (539)
T ss_dssp EEEETTC-CCCHHHHHHHHHHHHHH
T ss_pred EeCCCCC-CcCHHHHHHHHHHHHHh
Confidence 4433332 34466688888777653
No 170
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=73.66 E-value=24 Score=35.24 Aligned_cols=143 Identities=18% Similarity=0.224 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCC-----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-----CCc------
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWG-----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-----GNG------ 299 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~-----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-----G~~------ 299 (411)
-.+++++.+.++|++.|-++-+.. .+++++.|+. ++++.+. .++.++..... |..
T Consensus 31 dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~-----l~~i~~~----~~~~~l~~l~R~~N~~G~~~~~ddv 101 (464)
T 2nx9_A 31 DMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQR-----LRLLKQA----MPNTPLQMLLRGQNLLGYRHYADDV 101 (464)
T ss_dssp GTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHH-----HHHHHHH----CSSSCEEEEECGGGTTSSSCCCHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHH-----HHHHHHh----CCCCeEEEEeccccccCcccccchh
Confidence 334556678889999886643321 2567766654 2333332 23566666664 321
Q ss_pred -c-cHhHHhcCCCcEEEc-CCCCCHHHH------HHHhCCCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCCCCeEEe
Q 015201 300 -G-FLERMKGTGVDVIGL-DWTVDMADG------RKRLGNDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGSRGHILN 369 (411)
Q Consensus 300 -~-~l~~~~e~g~d~l~~-d~~~di~~~------~~~~g~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~~gfIls 369 (411)
. .++...+.|++++.+ +...|+..+ .+..|. .+.+.+.... -.-+++.+.+.++++.+.+. .+++
T Consensus 102 ~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~--~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Ga---d~I~ 176 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGA--HAQGTLCYTTSPVHNLQTWVDVAQQLAELGV---DSIA 176 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC--EEEEEEECCCCTTCCHHHHHHHHHHHHHTTC---SEEE
T ss_pred hHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCC--EEEEEEEeeeCCCCCHHHHHHHHHHHHHCCC---CEEE
Confidence 1 256677899999975 333333222 233453 3455553322 12488888888888877542 2344
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 370 LGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 370 ~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
...++ ....|+.+..+++++++.
T Consensus 177 l~DT~-G~~~P~~v~~lv~~l~~~ 199 (464)
T 2nx9_A 177 LKDMA-GILTPYAAEELVSTLKKQ 199 (464)
T ss_dssp EEETT-SCCCHHHHHHHHHHHHHH
T ss_pred EcCCC-CCcCHHHHHHHHHHHHHh
Confidence 33222 334577788888888764
No 171
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=73.36 E-value=34 Score=30.75 Aligned_cols=95 Identities=11% Similarity=0.077 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC-c-EEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCC
Q 015201 269 QWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV-D-VIGLDWTVDMADGRKRLGNDISVQGNVDPACLFS 345 (411)
Q Consensus 269 ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~-d-~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~g 345 (411)
+.-.+.+++.++.+++. +.|+++|+-.... .++.+.+.|. . +++.-. -+...+++.....+-+. +++...++
T Consensus 122 ~~q~~~f~~~~~la~~~--~lPv~iH~~~a~~~~~~il~~~~~~~~v~H~~~-g~~~~~~~~~~~g~~i~--~~g~~~~~ 196 (272)
T 2y1h_A 122 EEQRQVLIRQIQLAKRL--NLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFD-GRPSVAMEGVRAGYFFS--IPPSIIRS 196 (272)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEECTTCHHHHHHHHHHTTCCSEEEETCC-SCHHHHHHHHHTTCEEE--ECGGGGTC
T ss_pred HHHHHHHHHHHHHHHHh--CCcEEEEeCCcHHHHHHHHHhCCCCCEEEEccC-CCHHHHHHHHHCCCEEE--ECCcccCc
Confidence 44457788888888887 7999999865544 4677777753 3 345432 25666665543222221 22222222
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 346 PLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 346 t~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+ .++++++.....+++++|++..
T Consensus 197 --~----~~~~~~~~~~~drll~eTD~P~ 219 (272)
T 2y1h_A 197 --G----QKQKLVKQLPLTSICLETDSPA 219 (272)
T ss_dssp --H----HHHHHHHHSCGGGEEECCCTTS
T ss_pred --H----HHHHHHHhCCHHHEEEecCCCC
Confidence 2 4667777665578999999853
No 172
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=73.02 E-value=36 Score=31.98 Aligned_cols=138 Identities=12% Similarity=0.124 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCc-ccHhHHhcCCCcEE
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNG-GFLERMKGTGVDVI 313 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~-~~l~~~~e~g~d~l 313 (411)
.+...+++..+.+..+|.- +|+...+-.-..++..++..+.+.+.++|+.+|.+ |.. ..+..-++.|++.+
T Consensus 29 ~~~avi~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtSV 101 (307)
T 3n9r_A 29 MLNAIFEAGNEENSPLFIQ-------ASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSV 101 (307)
T ss_dssp HHHHHHHHHHHHTCCEEEE-------EEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHhCCCEEEE-------cChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 3344555667778887642 34433222233455666666555423799999997 433 24666678899998
Q ss_pred EcCCC-CC----HHHHHH------HhCCCeeE------EccCC----c---CccCCCHHHHHHHHHHHHHHhC-C-CCeE
Q 015201 314 GLDWT-VD----MADGRK------RLGNDISV------QGNVD----P---ACLFSPLPALTDEIQRVVKCAG-S-RGHI 367 (411)
Q Consensus 314 ~~d~~-~d----i~~~~~------~~g~~~~l------~G~vd----~---~~L~gt~eeV~~ev~~~i~~~~-~-~gfI 367 (411)
.+|.. .+ +...++ .+| +++ .||.. . ..++-+|||+.+.+++. + + =-.-
T Consensus 102 MiDgS~~p~eeNi~~Tk~vv~~ah~~g--vsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~T----gvD~LAva 175 (307)
T 3n9r_A 102 MIDASHHAFEENLELTSKVVKMAHNAG--VSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKES----QVDYLAPA 175 (307)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHTT--CEEEEEESCCCCC----------CCSCCHHHHHHHHHHH----CCSEEEEC
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHcC--CeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHH----CCCEEEEe
Confidence 88743 23 333332 222 333 22321 1 12456899888877652 2 1 1122
Q ss_pred EeCCCCCC-----CCCcHHHHHHH
Q 015201 368 LNLGHGVL-----VGTPEEAVAHF 386 (411)
Q Consensus 368 ls~gc~i~-----~~tp~Eni~a~ 386 (411)
+++.|+.- |...++.++.+
T Consensus 176 iGt~HG~Yk~~~~p~Ld~~~L~~I 199 (307)
T 3n9r_A 176 IGTSHGAFKFKGEPKLDFERLQEV 199 (307)
T ss_dssp SSCCSSSBCCSSSCCCCHHHHHHH
T ss_pred cCCcccccCCCCCCccCHHHHHHH
Confidence 34456652 34567777766
No 173
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=72.51 E-value=18 Score=33.67 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++.= .++.+. +.+|++.++.++.. -+ ....+.
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~----~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSS----FIAAGI---APSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHH----HHHTTC---CGGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHH----HHHHhC---CCCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 3445666788899999988887774 7999987775432 223332 24789988877543 23 445678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 98 Gadavlv 104 (294)
T 3b4u_A 98 GARNILL 104 (294)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 174
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=72.30 E-value=19 Score=35.54 Aligned_cols=67 Identities=15% Similarity=0.109 Sum_probs=46.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H---hHHhcCCCcEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L---ERMKGTGVDVI 313 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l---~~~~e~g~d~l 313 (411)
++.++++.++|++.|.+.|..|. +.|..+.+++ +.+++.. ++++-+|.+.+... + -.-.+.|++.+
T Consensus 183 ~~v~~~~~~~Ga~~i~l~DTvG~-~~P~~v~~lv--------~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRVGIADTVGC-ATPRQVYDLI--------RTLRGVV-SCDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp HHHHHHHHHHCCSEEEEEETTSC-CCHHHHHHHH--------HHHHHHC-SSEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCccccCCccCc-CCHHHHHHHH--------HHHHhhc-CCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 45566777889999988887765 7788776654 3333332 56788999877652 2 23346899998
Q ss_pred E
Q 015201 314 G 314 (411)
Q Consensus 314 ~ 314 (411)
.
T Consensus 253 d 253 (423)
T 3ivs_A 253 D 253 (423)
T ss_dssp E
T ss_pred E
Confidence 4
No 175
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=72.24 E-value=20 Score=31.02 Aligned_cols=122 Identities=16% Similarity=0.098 Sum_probs=64.5
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC--Ccc-cHhHHhcCCCcEEEc-
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING--NGG-FLERMKGTGVDVIGL- 315 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG--~~~-~l~~~~e~g~d~l~~- 315 (411)
+++.+.++|+|++.++...+ ++ ..+++.+.++++ |.++.+-.+. +.. .++.+.+.|+|.+.+
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~----~~--------~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSAD----DS--------TIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSC----HH--------HHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEeccCC----hH--------HHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEE
Confidence 45677889999997655332 22 233556667666 4444332221 222 355666778998722
Q ss_pred ---C---CCCCH--HHHHHHh--CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHH
Q 015201 316 ---D---WTVDM--ADGRKRL--GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAH 385 (411)
Q Consensus 316 ---d---~~~di--~~~~~~~--g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a 385 (411)
. ...+. ..+++.. .-.+.+.|||++. .++++++.+. .+++++++=. ...-|.+.+++
T Consensus 135 ~~~~~~~~g~~~~~~~i~~~~~~~~pi~v~GGI~~~-----------~~~~~~~aGa-d~vvvGsaI~-~~~dp~~~~~~ 201 (207)
T 3ajx_A 135 AGLDEQAKPGFDLNGLLAAGEKARVPFSVAGGVKVA-----------TIPAVQKAGA-EVAVAGGAIY-GAADPAAAAKE 201 (207)
T ss_dssp CCHHHHTSTTCCTHHHHHHHHHHTSCEEEESSCCGG-----------GHHHHHHTTC-SEEEESHHHH-TSSSHHHHHHH
T ss_pred ecccccccCCCchHHHHHHhhCCCCCEEEECCcCHH-----------HHHHHHHcCC-CEEEEeeecc-CCCCHHHHHHH
Confidence 1 12111 5566655 3357888999874 3344454433 3566554411 11124555655
Q ss_pred HHH
Q 015201 386 FFE 388 (411)
Q Consensus 386 ~~~ 388 (411)
+.+
T Consensus 202 ~~~ 204 (207)
T 3ajx_A 202 LRA 204 (207)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 176
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=72.05 E-value=62 Score=30.25 Aligned_cols=73 Identities=16% Similarity=0.201 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cH---hHHhcCC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FL---ERMKGTG 309 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l---~~~~e~g 309 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++++. ..++.+. +.+|++.++.+++. -+ ....+.|
T Consensus 34 ~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~----~~~~~~~---grvpViaGvg~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 34 GLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVAT----RVTELVN---GRATVVAGIGYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp HHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHH----HHHHHHT---TSSEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHH----HHHHHhC---CCCeEEecCCcCHHHHHHHHHHHHHcC
Confidence 3445566778899999977776664 699998877653 3334443 25789988877332 23 4455689
Q ss_pred CcEEEc
Q 015201 310 VDVIGL 315 (411)
Q Consensus 310 ~d~l~~ 315 (411)
+|++.+
T Consensus 107 adavlv 112 (314)
T 3d0c_A 107 ADCVMI 112 (314)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998753
No 177
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=72.04 E-value=32 Score=31.76 Aligned_cols=96 Identities=18% Similarity=0.146 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-c--c-cHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-G--G-FLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~--~-~l~~~~e~g 309 (411)
+-.++.++...++|+|++.+.-+.-.- .|+ +=+.-|++.+.+.. ++|++++..-. + . ..+.+.+ -
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~-~ 146 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFPRLSE----RQIAKYFRDLCSAV-----SIPVFLYNYPAAVGRDVDARAAKE-L 146 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSSTTCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSSCCCHHHHHH-H
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeChhhcCCCCCHHHHHh-c
Confidence 444567778888999999876665433 354 45667778888765 47888877521 1 2 2355555 2
Q ss_pred CcEEEc-CCCCCHHHHHHH--hCCCeeEEccCCc
Q 015201 310 VDVIGL-DWTVDMADGRKR--LGNDISVQGNVDP 340 (411)
Q Consensus 310 ~d~l~~-d~~~di~~~~~~--~g~~~~l~G~vd~ 340 (411)
-++..+ +...|+....+. .+++..+..|.|.
T Consensus 147 pnivgiKds~gd~~~~~~~~~~~~~f~v~~G~d~ 180 (286)
T 2r91_A 147 GCIRGVKDTNESLAHTLAYKRYLPQARVYNGSDS 180 (286)
T ss_dssp SCEEEEEECCSCHHHHHHHHHHCTTSEEEECCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCEEEEEccHH
Confidence 345554 334465544332 4555655555554
No 178
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=71.17 E-value=43 Score=31.60 Aligned_cols=82 Identities=24% Similarity=0.398 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH------H---HHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM------W---EQWSEPYIREIVSLVRTKCPETPIVLYINGN- 298 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~------f---~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~- 298 (411)
+.+...+.++...++|.|+|-+.-.-+ .|+||.. | -+-=..+..++++.+++.. +.|+.+-+..+
T Consensus 142 ~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~ 220 (338)
T 1z41_A 142 TVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASD 220 (338)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcc
Confidence 334445556677889999998764322 1333321 0 0111234456666666655 67888776542
Q ss_pred ------c--c---cHhHHhcCCCcEEEc
Q 015201 299 ------G--G---FLERMKGTGVDVIGL 315 (411)
Q Consensus 299 ------~--~---~l~~~~e~g~d~l~~ 315 (411)
. . +...+.+.|+|.+++
T Consensus 221 ~~~~g~~~~~~~~~a~~l~~~Gvd~i~v 248 (338)
T 1z41_A 221 YTDKGLDIADHIGFAKWMKEQGVDLIDC 248 (338)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 1 1 235667889999975
No 179
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=71.12 E-value=68 Score=29.98 Aligned_cols=137 Identities=15% Similarity=0.068 Sum_probs=81.6
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-cCCcc--cH----hHHhcCCCcE
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-NGNGG--FL----ERMKGTGVDV 312 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-CG~~~--~l----~~~~e~g~d~ 312 (411)
.++.+.+.++|+|.+.|..++-.... --.++..+++. |++.+.|. |.+.+ -+ ..+.+.|++.
T Consensus 34 ~~~~L~~~~pd~vsVT~~~~g~~r~~---------t~~~a~~i~~~--g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~n 102 (310)
T 3apt_A 34 TLEELKAFRPAFVSITYGAMGSTRER---------SVAWAQRIQSL--GLNPLAHLTVAGQSRKEVAEVLHRFVESGVEN 102 (310)
T ss_dssp HHHHHGGGCCSEEEECCCSTTCSHHH---------HHHHHHHHHHT--TCCBCEEEECTTSCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCCEEEEecCCCCCcchh---------HHHHHHHHHHh--CCCeEEEeecCCCCHHHHHHHHHHHHHCCCCE
Confidence 34455566899999988665522111 22356666644 56677776 54443 13 3345689886
Q ss_pred EE-c--CC----C--------C----CH-HHHHHHhCCCeeEEccCCcCc-cC-CCHHHHHHHHHHHHHHhCCCCeEEeC
Q 015201 313 IG-L--DW----T--------V----DM-ADGRKRLGNDISVQGNVDPAC-LF-SPLPALTDEIQRVVKCAGSRGHILNL 370 (411)
Q Consensus 313 l~-~--d~----~--------~----di-~~~~~~~g~~~~l~G~vd~~~-L~-gt~eeV~~ev~~~i~~~~~~gfIls~ 370 (411)
+- + |. . . ++ ..+++.+|++.++.+...|.. .. .+.+.-.+..++-++.+. .|+++
T Consensus 103 iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGA--df~iT- 179 (310)
T 3apt_A 103 LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGL--DFAIT- 179 (310)
T ss_dssp EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHC--SEEEE-
T ss_pred EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCC--CEEEe-
Confidence 52 1 10 1 1 22 224454476577777777753 32 566555566666666664 47775
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 371 GHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 371 gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
+.--+.+.+..+++.+++.|
T Consensus 180 ----Q~ffD~~~~~~f~~~~r~~G 199 (310)
T 3apt_A 180 ----QLFFNNAHYFGFLERARRAG 199 (310)
T ss_dssp ----CCCSCHHHHHHHHHHHHHTT
T ss_pred ----cccCCHHHHHHHHHHHHHcC
Confidence 34457899999999999876
No 180
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=71.10 E-value=44 Score=31.76 Aligned_cols=86 Identities=22% Similarity=0.379 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH----------HHHHHHHHHHHHHHHHHhhCC-CCCEEEE
Q 015201 230 LSHLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM----------WEQWSEPYIREIVSLVRTKCP-ETPIVLY 294 (411)
Q Consensus 230 l~~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~----------f~ef~~Py~k~i~~~i~~~~~-g~~~~~H 294 (411)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++. =.-+..++++.+++..| +.|+.+-
T Consensus 147 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVR~avG~d~pV~vR 225 (349)
T 3hgj_A 147 MERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLEN-RMRFPLQVAQAVREVVPRELPLFVR 225 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHSCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHH-HHHHHHHHHHHHHHHhcCCceEEEE
Confidence 334444455556677889999998875433 1444421 111 12344566666666543 5677765
Q ss_pred ecC-------Cc-c----cHhHHhcCCCcEEEcC
Q 015201 295 ING-------NG-G----FLERMKGTGVDVIGLD 316 (411)
Q Consensus 295 ~CG-------~~-~----~l~~~~e~g~d~l~~d 316 (411)
+.. .. . +...+.+.|+|.+++.
T Consensus 226 ls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 226 VSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp EESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 543 22 1 2366778899999764
No 181
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=70.88 E-value=21 Score=31.56 Aligned_cols=121 Identities=16% Similarity=0.173 Sum_probs=61.6
Q ss_pred HHHHHHHHhCCCEEEEecC--CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEE-
Q 015201 239 DYIIYQVESGAHCIQIFDS--WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVI- 313 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~--~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l- 313 (411)
++++.+.++|+|++++++. ... + ..++++.+++. |..+++-.. +... .+..+. .++|.+
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~~-----~--------~~~~~~~~~~~--g~~ig~~~~p~t~~e~~~~~~-~~~d~vl 145 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSSTI-----H--------LHRTINQIKSL--GAKAGVVLNPGTPLTAIEYVL-DAVDLVL 145 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTCS-----C--------HHHHHHHHHHT--TSEEEEEECTTCCGGGGTTTT-TTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEecCccch-----h--------HHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHH-hhCCEEE
Confidence 4566778899999988875 321 1 12445566665 444333222 2211 233222 356666
Q ss_pred --EcCC-----CCC------HHHHHHHh-----CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 314 --GLDW-----TVD------MADGRKRL-----GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 314 --~~d~-----~~d------i~~~~~~~-----g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
++.. ..+ +.++++.+ .-.+.+.|||++ +.+.++++. +..+++++++-.=.
T Consensus 146 ~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~-----------~n~~~~~~a-Gad~vvvgSaI~~a 213 (230)
T 1rpx_A 146 IMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGP-----------KNAYKVIEA-GANALVAGSAVFGA 213 (230)
T ss_dssp EESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCT-----------TTHHHHHHH-TCCEEEESHHHHTS
T ss_pred EEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCH-----------HHHHHHHHc-CCCEEEEChhhhCC
Confidence 3321 111 24555554 233677899987 233444443 44577777663212
Q ss_pred CCCcHHHHHHHHH
Q 015201 376 VGTPEEAVAHFFE 388 (411)
Q Consensus 376 ~~tp~Eni~a~~~ 388 (411)
++ |.+.++++.+
T Consensus 214 ~d-p~~a~~~l~~ 225 (230)
T 1rpx_A 214 PD-YAEAIKGIKT 225 (230)
T ss_dssp SC-HHHHHHHHHT
T ss_pred CC-HHHHHHHHHH
Confidence 22 5566665543
No 182
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=70.69 E-value=57 Score=28.95 Aligned_cols=158 Identities=13% Similarity=-0.046 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC----------cc---
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN----------GG--- 300 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~----------~~--- 300 (411)
.+.+.+.++...+.|++.+.+.-.-++--.++...+.....++++.+.++++ |+.+.+|..+. ..
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPL--GMRVGLEYVGPHHLRHRRYPFVQSLA 160 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEEECCCCGGGCCSSEECCCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCCHH
Confidence 3455566677778899988643111112234556677888999999999887 78899998751 11
Q ss_pred c-HhHHhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeEE--ccCCc---------CccCCCHHHHHHHHHHHHHH
Q 015201 301 F-LERMKGTGVDV--IGLD------WTVDMADGRKRLGNDISVQ--GNVDP---------ACLFSPLPALTDEIQRVVKC 360 (411)
Q Consensus 301 ~-l~~~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~--G~vd~---------~~L~gt~eeV~~ev~~~i~~ 360 (411)
. .+.+.+.|-+. +.+| ...|+.++.+++++++..+ -+... ....|+-+-=-+.+.+.|+.
T Consensus 161 ~~~~l~~~v~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~G~G~id~~~~~~~L~~ 240 (281)
T 3u0h_A 161 DLKTFWEAIGAPNVGALVDSYHWYTAGEHEDDLAQLPPEKVVYVHINDTRDAPEDAHDGKRLLPGDGRIPLVPFLRGLYL 240 (281)
T ss_dssp HHHHHHHHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECBCSSCTTTCCTTSCBCTTSSSSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCeeEEeehhHHHHcCCCHHHHHhcCcccEEEEEecCCCCCcccchhccCcCCCCcCcCHHHHHHHHHH
Confidence 1 23344444332 3333 2458888888888765442 21111 11223222112444555555
Q ss_pred hC-CCCeEEeC-CCCCCCCCcHHHHHHHHHHHHhc
Q 015201 361 AG-SRGHILNL-GHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 361 ~~-~~gfIls~-gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.+ .|-+++-. +.......|.|-++.-++..+++
T Consensus 241 ~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~~l~~~ 275 (281)
T 3u0h_A 241 AGYRGPVAAEVLHETPLDGTGESRARLVRERLEKL 275 (281)
T ss_dssp HTCCSEEEECCCCSSCCSSCHHHHHHHHHHHHHHH
T ss_pred cCCCCcEEEEecChhhccCCHHHHHHHHHHHHHHH
Confidence 55 35455543 22333345667777666666654
No 183
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=70.64 E-value=15 Score=35.41 Aligned_cols=85 Identities=11% Similarity=0.017 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcCC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGTG 309 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~g 309 (411)
+.+.++.+++.|+|++++....|. .+|.++.++.+. ..++.+. +.+|++.++.++.. -+ ....+.|
T Consensus 82 l~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~----~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~G 154 (360)
T 4dpp_A 82 YDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIG----HTVNCFG---GSIKVIGNTGSNSTREAIHATEQGFAVG 154 (360)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHT---TTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHH----HHHHHhC---CCCeEEEecCCCCHHHHHHHHHHHHHcC
Confidence 345555778899999988877774 799998877553 3334443 25788888766543 23 4555789
Q ss_pred CcEEEcC----CCCCHHHHHHHh
Q 015201 310 VDVIGLD----WTVDMADGRKRL 328 (411)
Q Consensus 310 ~d~l~~d----~~~di~~~~~~~ 328 (411)
+|++.+- ...+-+++.+.|
T Consensus 155 adavlvv~PyY~k~sq~gl~~hf 177 (360)
T 4dpp_A 155 MHAALHINPYYGKTSIEGLIAHF 177 (360)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCEEEEcCCCCCCCCHHHHHHHH
Confidence 9997431 123555554444
No 184
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=70.13 E-value=40 Score=31.38 Aligned_cols=123 Identities=15% Similarity=0.159 Sum_probs=71.4
Q ss_pred HHHHHHHHHHHhCC-ceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 015201 172 VGDSLKILRKEVGE-HAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAH 250 (411)
Q Consensus 172 ~~eaik~l~~~~~~-~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d 250 (411)
..+.++...+..++ ++|++..+++. + ++-.++.++...++|+|
T Consensus 62 r~~v~~~~~~~~~g~rvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gad 105 (301)
T 3m5v_A 62 HRTCIEIAVETCKGTKVKVLAGAGSN-----------A-------------------------THEAVGLAKFAKEHGAD 105 (301)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCC-----------C-------------------------HHHHHHHHHHHHHcCCC
Confidence 34555666777778 89998876441 0 23345667777889999
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHH
Q 015201 251 CIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMA 322 (411)
Q Consensus 251 ~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~ 322 (411)
++.+.-++-.-.|+ +=+.-|++++.+.. ++|++++.+ |.. . .+..+.+.-.++..+ +...|+.
T Consensus 106 avlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdssgd~~ 176 (301)
T 3m5v_A 106 GILSVAPYYNKPTQ----QGLYEHYKAIAQSV-----DIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEASGNID 176 (301)
T ss_dssp EEEEECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSSCHH
T ss_pred EEEEcCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCCCCHH
Confidence 99887665443454 44566788888776 468877775 322 1 234444541255555 3334554
Q ss_pred HH---HHHhCCCeeEEccCCc
Q 015201 323 DG---RKRLGNDISVQGNVDP 340 (411)
Q Consensus 323 ~~---~~~~g~~~~l~G~vd~ 340 (411)
.. .+.. ++..+..|-|.
T Consensus 177 ~~~~~~~~~-~~f~v~~G~d~ 196 (301)
T 3m5v_A 177 KCVDLLAHE-PRMMLISGEDA 196 (301)
T ss_dssp HHHHHHHHC-TTSEEEECCGG
T ss_pred HHHHHHHhC-CCeEEEEccHH
Confidence 43 3333 33444444443
No 185
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=69.99 E-value=54 Score=31.54 Aligned_cols=102 Identities=14% Similarity=0.114 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCH-------------HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWG----GQLPP-------------HMWEQWSEPYIREIVSLVRTKCPETPIVLYI 295 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp-------------~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~ 295 (411)
+.+...+.++...++|.|+|-+.-.-+ .|+|| +.--+| ..++++.+++..|..|+.+-+
T Consensus 165 ~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~----~~eiv~aVr~avg~~~V~vrl 240 (376)
T 1icp_A 165 IVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRF----ALEIVEAVANEIGSDRVGIRI 240 (376)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHH----HHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHH----HHHHHHHHHHHhcCCceEEEe
Confidence 334444556677889999998764322 12333 222334 445555555543212676655
Q ss_pred cCC---------c-----c-cHhHHhcCCCcEEEcCCC------------CCHHHHHHHhCCCeeEEccC
Q 015201 296 NGN---------G-----G-FLERMKGTGVDVIGLDWT------------VDMADGRKRLGNDISVQGNV 338 (411)
Q Consensus 296 CG~---------~-----~-~l~~~~e~g~d~l~~d~~------------~di~~~~~~~g~~~~l~G~v 338 (411)
... . . +...+.+.|+|.+++... --+.++++.++..++..|++
T Consensus 241 s~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i 310 (376)
T 1icp_A 241 SPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY 310 (376)
T ss_dssp CTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC
Confidence 421 1 1 235666889999976321 12456777776555556665
No 186
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=69.79 E-value=62 Score=30.74 Aligned_cols=84 Identities=20% Similarity=0.412 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCCC----CCCHHH----------HHHHHHHHHHHHHHHHHhhCC-CCCEEEE
Q 015201 230 LSHLTQAIADYIIYQVESGAHCIQIFDSWGG----QLPPHM----------WEQWSEPYIREIVSLVRTKCP-ETPIVLY 294 (411)
Q Consensus 230 l~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~----~iSp~~----------f~ef~~Py~k~i~~~i~~~~~-g~~~~~H 294 (411)
++.+.+...+.++...++|.|+|-+.-.-|- |+||.. ++. =.-+..++++.+++..| +.|+.+-
T Consensus 138 I~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslen-R~rf~~eiv~aVr~avg~d~pv~vR 216 (343)
T 3kru_A 138 IKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIEN-RARFLIEVIDEVRKNWPENKPIFVR 216 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HTHHHHHHHHHHHHTSCTTSCEEEE
T ss_pred HHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHh-HHHHHHHHHHHHHhcCCccCCeEEE
Confidence 3334444455566778899999988743221 333321 111 13455667777776643 5677775
Q ss_pred ecCC-------c-c----cHhHHhcCCCcEEEc
Q 015201 295 INGN-------G-G----FLERMKGTGVDVIGL 315 (411)
Q Consensus 295 ~CG~-------~-~----~l~~~~e~g~d~l~~ 315 (411)
+..+ . . +...+.+. +|.+++
T Consensus 217 ls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 217 VSADDYMEGGINIDMMVEYINMIKDK-VDLIDV 248 (343)
T ss_dssp EECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEE
T ss_pred eechhhhccCccHHHHHHHHHHhhcc-ccEEec
Confidence 5432 1 1 23556678 999876
No 187
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=69.64 E-value=73 Score=31.08 Aligned_cols=153 Identities=11% Similarity=0.061 Sum_probs=79.8
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-CCCCHHHHH------HHHHHHHHHHHHHHHhhCCCC-
Q 015201 218 MCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-GQLPPHMWE------QWSEPYIREIVSLVRTKCPET- 289 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~~f~------ef~~Py~k~i~~~i~~~~~g~- 289 (411)
.+.++||.|. +.-+.++++|+|+| ....++ +...-+.+. +-+....++-++.+++.....
T Consensus 48 l~l~~Pe~V~-----------~iH~~Yl~AGAdII-~TNTf~A~~~~l~~~G~~~~~~~~~~eln~~Av~LAreAa~~~~ 115 (406)
T 1lt8_A 48 AAVEHPEAVR-----------QLHREFLRAGSNVM-QTFTFYASEDKLENRGNYVLEKISGQEVNEAAADIARQVADEGD 115 (406)
T ss_dssp HHHHCHHHHH-----------HHHHHHHHTTCSEE-ECSCTTCSSCC-------------CHHHHHHHHHHHHHHHTTTT
T ss_pred hhccCHHHHH-----------HHHHHHHHhCccce-eccccccCHHHHHhcCCccchhHHHHHHHHHHHHHHHHHHhcCC
Confidence 4667886544 44557889999976 444444 222222211 123344444444444321011
Q ss_pred CEEEEecCCcc-----------------cHhHHhcCCCcEEEcCCCCCHHHHHHH------hCCCeeEEccCCcC-ccC-
Q 015201 290 PIVLYINGNGG-----------------FLERMKGTGVDVIGLDWTVDMADGRKR------LGNDISVQGNVDPA-CLF- 344 (411)
Q Consensus 290 ~~~~H~CG~~~-----------------~l~~~~e~g~d~l~~d~~~di~~~~~~------~g~~~~l~G~vd~~-~L~- 344 (411)
..+.=+.|-.. .++.+.+.|+|.|-++...|+.|++-. .+-.+.+..-++.. .+.
T Consensus 116 ~~VAGsIGP~g~~l~~~s~eel~~~~~eqi~~L~~~GvDlll~ETi~~~~Eakaa~~a~~~~~lPv~iS~T~~~~G~l~G 195 (406)
T 1lt8_A 116 ALVAGGVSQTPSYLSAKSETEVKKVFLQQLEVFMKKNVDFLIAEYFEHVEEAVWAVETLIASGKPVAATMAIGPEGDLHG 195 (406)
T ss_dssp CEEEEEECCCHHHHTTCHHHHHHHHHHHHHHHHHHHTCSEEEECCCSCHHHHHHHHHHHGGGTSCEEEEECCBTTBCTTC
T ss_pred CEEEEEcCCcccccCCCCHHHHHHHHHHHHHHHhhCCCCEEEEcccCCHHHHHHHHHHHHHhCCcEEEEEEECCCCCcCC
Confidence 23333334321 123456789999999888888776532 34445666666543 244
Q ss_pred CCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHh
Q 015201 345 SPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKS 392 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~ 392 (411)
.+.+++...+.. . +-..++..|++. |+.+...++..++
T Consensus 196 ~~~~~~~~~l~~----~--~~~avGvNC~~g----P~~~~~~l~~l~~ 233 (406)
T 1lt8_A 196 VPPGEAAVRLVK----A--GASIIGVNCHFD----PTISLKTVKLMKE 233 (406)
T ss_dssp CCHHHHHHHHHT----T--TCSEEEEESSSC----HHHHHHHHHHHHH
T ss_pred CcHHHHHHHhhc----C--CCCEEEecCCCC----HHHHHHHHHHHHH
Confidence 355554433322 2 256778888654 5566666655553
No 188
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=69.60 E-value=17 Score=40.61 Aligned_cols=85 Identities=20% Similarity=0.198 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-hH--HhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-ER--MKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~~--~~e~g~ 310 (411)
++.++.++.+.++|+|.|.+.|..|. +.|....+ +++.+++.. ++++-+|.+.+... + .. -.+.|+
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G~-~~P~~~~~--------lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa 761 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAGL-LKPKAAYE--------LIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGV 761 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCC-CCHHHHHH--------HHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccCC-CCHHHHHH--------HHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCC
Confidence 56777888889999999988877654 78877655 344555543 67899999877652 3 33 336899
Q ss_pred cEEEc-----C---CCCCHHHHHHHhC
Q 015201 311 DVIGL-----D---WTVDMADGRKRLG 329 (411)
Q Consensus 311 d~l~~-----d---~~~di~~~~~~~g 329 (411)
+.+.. . ...++..+...+.
T Consensus 762 ~~vD~ai~GlG~~~gn~~lE~lv~~L~ 788 (1150)
T 3hbl_A 762 DIIDTAVASMSGLTSQPSANSLYYALN 788 (1150)
T ss_dssp SEEEEBCGGGCSBTSCCBHHHHHHHTT
T ss_pred CEEEEeccccCCCCCCccHHHHHHHHH
Confidence 99842 1 2346666666554
No 189
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=69.39 E-value=31 Score=32.06 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCc-ccHhHHhcCCCcE
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWG-GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNG-GFLERMKGTGVDV 312 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~-~~l~~~~e~g~d~ 312 (411)
.+...+++..+.+..+|.-....+ .+++ .+++.++.+.+.+ .. ++|+.+|.+ |.. ..+..-++.|++.
T Consensus 30 ~~~avl~AAe~~~sPvIlq~s~~~~~y~g----~~~~~~~v~~~a~----~~-~VPValHlDHg~~~e~i~~ai~~GFtS 100 (286)
T 1gvf_A 30 TIQAILEVCSEMRSPVILAGTPGTFKHIA----LEEIYALCSAYST----TY-NMPLALHLDHHESLDDIRRKVHAGVRS 100 (286)
T ss_dssp HHHHHHHHHHHHTCCCEEEECTTHHHHSC----HHHHHHHHHHHHH----HT-TSCBEEEEEEECCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhCCCEEEECChhHHhhcC----HHHHHHHHHHHHH----hC-CCcEEEEcCCCCCHHHHHHHHHcCCCe
Confidence 334445566677877764222221 1232 1333444444433 32 699999997 433 2567777899999
Q ss_pred EEcCC
Q 015201 313 IGLDW 317 (411)
Q Consensus 313 l~~d~ 317 (411)
+.+|.
T Consensus 101 VMiDg 105 (286)
T 1gvf_A 101 AMIDG 105 (286)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98874
No 190
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=69.26 E-value=13 Score=38.70 Aligned_cols=77 Identities=16% Similarity=0.303 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCCC-----CCC--HHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-----c
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWGG-----QLP--PHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-----G 300 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~~-----~iS--p~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-----~ 300 (411)
-++..++|++...+.|.+.+.+-+.|.+ ++. |+ .-+++|++..|++ |+.+++|..-.. .
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~-------~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~ 377 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKE-------IDLKELVDYAASK--NVGIILWAGYHAFERDME 377 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTT-------CCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCc-------CCHHHHHHHHHhc--CCEEEEEeeCcchHHHHH
Confidence 3466778888889999999988667753 211 22 2488999999998 688888876431 1
Q ss_pred -cHhHHhcCCCcEEEcCCC
Q 015201 301 -FLERMKGTGVDVIGLDWT 318 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d~~ 318 (411)
.++.+.++|++++=+|+.
T Consensus 378 ~~~~~~~~~Gv~gvK~Df~ 396 (641)
T 3a24_A 378 NVCRHYAEMGVKGFKVDFM 396 (641)
T ss_dssp HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 356788889999877653
No 191
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=69.17 E-value=17 Score=40.63 Aligned_cols=85 Identities=19% Similarity=0.200 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-hH--HhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-ER--MKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~~--~~e~g~ 310 (411)
++.++.++.+.++|++.|.+.|..|. +.|....++ ++.+++.. ++++-+|.+.+... + .. -.+.|+
T Consensus 709 ~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~P~~~~~l--------v~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa 778 (1165)
T 2qf7_A 709 KYYTNLAVELEKAGAHIIAVKDMAGL-LKPAAAKVL--------FKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGV 778 (1165)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTCC-CCHHHHHHH--------HHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCccCC-cCHHHHHHH--------HHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCC
Confidence 45667778888999999988887665 778776554 44444443 57899999877652 3 33 346899
Q ss_pred cEEEc-----C---CCCCHHHHHHHhC
Q 015201 311 DVIGL-----D---WTVDMADGRKRLG 329 (411)
Q Consensus 311 d~l~~-----d---~~~di~~~~~~~g 329 (411)
+.+.. . ...++.++.-.+.
T Consensus 779 ~~vd~ti~GlGe~~Gn~~le~vv~~L~ 805 (1165)
T 2qf7_A 779 DAVDAAMDALSGNTSQPCLGSIVEALS 805 (1165)
T ss_dssp SEEEEBCGGGCSBTSCCBHHHHHHHHT
T ss_pred CEEEecccccCCCccchhHHHHHHHHH
Confidence 99853 2 1346666665554
No 192
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=69.09 E-value=43 Score=32.14 Aligned_cols=101 Identities=9% Similarity=0.041 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHH-------------HHHHHHHHHHHHHHHHHHhhCC-CCCEEEE
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPH-------------MWEQWSEPYIREIVSLVRTKCP-ETPIVLY 294 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~-------------~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H 294 (411)
+.+...+.++...++|.|+|-+.-.-+ .|+||. .--+|. .++++.+++..+ + |+.+-
T Consensus 159 ~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~----~eiv~avr~~vg~~-pv~vr 233 (365)
T 2gou_A 159 VIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFL----DEVVAALVDAIGAE-RVGVR 233 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHH----HHHHHHHHHHHCGG-GEEEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHH----HHHHHHHHHHcCCC-cEEEE
Confidence 334444556677889999998854221 133332 222344 455555554432 3 67664
Q ss_pred ecCC----------c--c---cHhHHhcCCCcEEEcCCC-----C--C---HHHHHHHhCCCeeEEccC
Q 015201 295 INGN----------G--G---FLERMKGTGVDVIGLDWT-----V--D---MADGRKRLGNDISVQGNV 338 (411)
Q Consensus 295 ~CG~----------~--~---~l~~~~e~g~d~l~~d~~-----~--d---i~~~~~~~g~~~~l~G~v 338 (411)
+..+ . . +...+.+.|+|.+++... . + +.++++.++..++..|+|
T Consensus 234 is~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi 302 (365)
T 2gou_A 234 LAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY 302 (365)
T ss_dssp ECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC
T ss_pred EccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC
Confidence 4321 1 1 135566789999976432 1 1 456777776555555665
No 193
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=68.97 E-value=17 Score=31.48 Aligned_cols=120 Identities=17% Similarity=0.019 Sum_probs=64.6
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCCC--
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDWT-- 318 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~-- 318 (411)
++...++|+|++ +... ++ .++++.+++. |+|++. -|.....+....+.|+|.+.+...
T Consensus 76 ~~~a~~~Gad~i-v~~~----~~------------~~~~~~~~~~--g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPH----LD------------EEISQFCKEK--GVFYMP-GVMTPTELVKAMKLGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHTCSEE-ECSS----CC------------HHHHHHHHHH--TCEEEC-EECSHHHHHHHHHTTCCEEEETTHHH
T ss_pred HHHHHHcCCCEE-EcCC----CC------------HHHHHHHHHc--CCcEEC-CcCCHHHHHHHHHcCCCEEEEcCccc
Confidence 345567899998 4322 22 2456667776 677553 333333466677899999876431
Q ss_pred CCHHHHH---HHhC-CCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC--CcHHHHHHHHHHHHh
Q 015201 319 VDMADGR---KRLG-NDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVG--TPEEAVAHFFEVGKS 392 (411)
Q Consensus 319 ~di~~~~---~~~g-~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~--tp~Eni~a~~~a~~~ 392 (411)
..+..++ +.++ -.+...|||++. .+.++++.+ ..++++++.-- .++ .|.+..+++.+.+++
T Consensus 136 ~g~~~~~~l~~~~~~~pvia~GGI~~~-----------~~~~~~~~G-a~~v~vGs~i~-~~d~~~~~~~~~~~~~~~~~ 202 (205)
T 1wa3_A 136 VGPQFVKAMKGPFPNVKFVPTGGVNLD-----------NVCEWFKAG-VLAVGVGSALV-KGTPDEVREKAKAFVEKIRG 202 (205)
T ss_dssp HHHHHHHHHHTTCTTCEEEEBSSCCTT-----------THHHHHHHT-CSCEEECHHHH-CSCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEcCCCCHH-----------HHHHHHHCC-CCEEEECcccc-CCCHHHHHHHHHHHHHHHHh
Confidence 1233333 3332 234456888642 224444543 33555554311 111 156777777777665
Q ss_pred c
Q 015201 393 M 393 (411)
Q Consensus 393 y 393 (411)
.
T Consensus 203 ~ 203 (205)
T 1wa3_A 203 C 203 (205)
T ss_dssp C
T ss_pred h
Confidence 3
No 194
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=68.88 E-value=74 Score=30.49 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=29.7
Q ss_pred cCCCHHHHHHHHHHH--HHHhCCCCeE----EeCCCCCC----CCCcHHHHHHHHHHHHh-cC
Q 015201 343 LFSPLPALTDEIQRV--VKCAGSRGHI----LNLGHGVL----VGTPEEAVAHFFEVGKS-MK 394 (411)
Q Consensus 343 L~gt~eeV~~ev~~~--i~~~~~~gfI----ls~gc~i~----~~tp~Eni~a~~~a~~~-yg 394 (411)
++-+|||+.+.+++. ++ ..+. +++.|++- +...++.++..-+++++ +|
T Consensus 195 ~yT~Peea~~fv~~ttgvd----~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~~~~g 253 (358)
T 1dos_A 195 LYTQPEDVDYAYTELSKIS----PRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVSKKHN 253 (358)
T ss_dssp CSCCHHHHHHHHHHHHTTC----SCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHhcCCC----hhceEEEecccccCccCCCCCCcCHHHHHHHHHHHHHHhC
Confidence 567899998888763 33 1233 34446664 34567878777776543 44
No 195
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=68.62 E-value=32 Score=31.84 Aligned_cols=97 Identities=12% Similarity=0.089 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCcccHhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNGGFLERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~~~l~~~~e~g 309 (411)
+-.++.++...++|+|++.+.-+.-.- .|+ +=+.-|++++.+.. ++|++++.. |..-..+.+.+ -
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~-~ 147 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYPRMSE----KHLVKYFKTLCEVS-----PHPVYLYNYPTATGKDIDAKVAKE-I 147 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCSSCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHH-H
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH----HHHHHHHHHHHhhC-----CCCEEEEECchhhCcCCCHHHHHh-c
Confidence 344566777778899999887665443 454 44666778888765 468887775 22112355555 2
Q ss_pred CcEEEc-CCCCCHHHHHHH--hCCCeeEEccCCcC
Q 015201 310 VDVIGL-DWTVDMADGRKR--LGNDISVQGNVDPA 341 (411)
Q Consensus 310 ~d~l~~-d~~~di~~~~~~--~g~~~~l~G~vd~~ 341 (411)
-++..+ +..-|+....+. .+++..+..|-|..
T Consensus 148 pnIvgiKds~gd~~~~~~~~~~~~~f~v~~G~d~~ 182 (293)
T 1w3i_A 148 GCFTGVKDTIENIIHTLDYKRLNPNMLVYSGSDML 182 (293)
T ss_dssp CCEEEEEECCSCHHHHHHHHHHCTTSEEEECCSTT
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCEEEEEccHHH
Confidence 344454 333455444332 45566665555543
No 196
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=68.41 E-value=8.7 Score=36.12 Aligned_cols=73 Identities=8% Similarity=-0.035 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+.-..|. .+|.++.++.+. .+.+.+. +.+|++.|+.++.. -+ ....+.
T Consensus 36 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~ 108 (307)
T 3s5o_A 36 KLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVS----RVRQAMP---KNRLLLAGSGCESTQATVEMTVSMAQV 108 (307)
T ss_dssp HHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHTSC---TTSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHcC---CCCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 3445566778899999988887774 799988776533 2333332 35788888876543 23 456678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 109 Gadavlv 115 (307)
T 3s5o_A 109 GADAAMV 115 (307)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9999853
No 197
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=68.23 E-value=49 Score=29.71 Aligned_cols=98 Identities=11% Similarity=0.040 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEecC-Cc--ccHhHHhcCCCc----EE-EcCCCCCHHHHHHHh--CCCeeEEccCCcCc
Q 015201 273 PYIREIVSLVRTKCPETPIVLYING-NG--GFLERMKGTGVD----VI-GLDWTVDMADGRKRL--GNDISVQGNVDPAC 342 (411)
Q Consensus 273 Py~k~i~~~i~~~~~g~~~~~H~CG-~~--~~l~~~~e~g~d----~l-~~d~~~di~~~~~~~--g~~~~l~G~vd~~~ 342 (411)
..++++++.+++. |+|+++|+-. .. ..++.+.+.|++ ++ |+....+...+++.. |-.+.+-|. .. .
T Consensus 138 ~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~-~~-~ 213 (291)
T 1bf6_A 138 KVFIAAALAHNQT--GRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTI-GK-N 213 (291)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCT-TC-T
T ss_pred HHHHHHHHHHHHH--CCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccC-cc-c
Confidence 4566677777777 7899999731 11 246777777764 22 454434666666543 443444332 10 0
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
-..+.+.-.+.++++++......+++++++..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~ 245 (291)
T 1bf6_A 214 SYYPDEKRIAMLHALRDRGLLNRVMLSMDITR 245 (291)
T ss_dssp TTSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCC
Confidence 01123344556777777654478899998753
No 198
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=68.13 E-value=30 Score=34.84 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=43.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.++++|+|+|.+.-..+. + ....++++.+++..|+.|++...+........+.+.|+|.+.+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~---~--------~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN---S--------VYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC---S--------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCc---c--------hhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEE
Confidence 35566778899999876333221 2 2334566667766556787765554434567788899999854
No 199
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=68.05 E-value=30 Score=32.34 Aligned_cols=110 Identities=17% Similarity=0.255 Sum_probs=68.0
Q ss_pred HHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 015201 172 VGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHC 251 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~ 251 (411)
..+.++...+..++++|++..+++. + ++-.++.++...++|+|+
T Consensus 70 r~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~a~~~Gada 113 (304)
T 3l21_A 70 KIELLRAVLEAVGDRARVIAGAGTY-----------D-------------------------TAHSIRLAKACAAEGAHG 113 (304)
T ss_dssp HHHHHHHHHHHHTTTSEEEEECCCS-----------C-------------------------HHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHhCCCCeEEEeCCCC-----------C-------------------------HHHHHHHHHHHHHcCCCE
Confidence 3455556667777889998876442 0 233456677778899999
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHH
Q 015201 252 IQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMAD 323 (411)
Q Consensus 252 i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~ 323 (411)
+.+.-++-.-.|+ +=+.-|++++.+.. ++|++++.+ |.. . .+..+.+.+ +++.+ +...|+..
T Consensus 114 vlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~~ 183 (304)
T 3l21_A 114 LLVVTPYYSKPPQ----RGLQAHFTAVADAT-----ELPMLLYDIPGRSAVPIEPDTIRALASHP-NIVGVXDAKADLHS 183 (304)
T ss_dssp EEEECCCSSCCCH----HHHHHHHHHHHTSC-----SSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEEEECSCCHHH
T ss_pred EEECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHhcCC-CEEEEECCCCCHHH
Confidence 9887765443454 34556777777766 478888775 332 2 244555554 56555 34446666
Q ss_pred HHHH
Q 015201 324 GRKR 327 (411)
Q Consensus 324 ~~~~ 327 (411)
..+.
T Consensus 184 ~~~~ 187 (304)
T 3l21_A 184 GAQI 187 (304)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
No 200
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=67.70 E-value=32 Score=32.67 Aligned_cols=97 Identities=18% Similarity=0.191 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhCCCCCEEEEec-CCc--ccHhHHhcCCCc---E-E-EcCCCCCHHHHHHHh--CCCeeEEccCCcCccC
Q 015201 275 IREIVSLVRTKCPETPIVLYIN-GNG--GFLERMKGTGVD---V-I-GLDWTVDMADGRKRL--GNDISVQGNVDPACLF 344 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~C-G~~--~~l~~~~e~g~d---~-l-~~d~~~di~~~~~~~--g~~~~l~G~vd~~~L~ 344 (411)
++.-++..++. |.|+++|+. |.. ..++.+.+.|++ + + +++...|+.++++.+ |-.+.|-| +-.....
T Consensus 175 f~aq~~lA~~~--glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g-~~t~~~~ 251 (339)
T 3gtx_A 175 FRAAARVQRET--GVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDR-IGLQGMV 251 (339)
T ss_dssp HHHHHHHHHHH--CCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECC-TTCCSST
T ss_pred HHHHHHHHHHH--CCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEcc-Ccccccc
Confidence 34445555555 789999983 222 246777787765 2 2 555345788887765 44444433 2111122
Q ss_pred C--CHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 345 S--PLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 345 g--t~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+ +...-.+.++++++.....+++|++++.-
T Consensus 252 ~~p~~~~~~~~l~~li~~~~~drilleTD~p~ 283 (339)
T 3gtx_A 252 GTPTDAERLSVLTTLLGEGYADRLLLSHDSIW 283 (339)
T ss_dssp TCCCHHHHHHHHHHHHHTTCGGGEEECCCCEE
T ss_pred CCCchHHHHHHHHHHHHhcCCCeEEEecCCCc
Confidence 2 22244566788888765579999999873
No 201
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=67.29 E-value=17 Score=32.21 Aligned_cols=85 Identities=15% Similarity=0.091 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCCcEEEc
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGVDVIGL 315 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~d~l~~ 315 (411)
..+.++.+.++|+|.+.+.|..+.... .+...++++.+++.. ++|++.|.-=... .++.+.+.|+|.+.+
T Consensus 35 ~~~~a~~~~~~G~d~i~v~~~~~~~~~--------~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 35 PVEMAVRYEEEGADEIAILDITAAPEG--------RATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSV 105 (253)
T ss_dssp HHHHHHHHHHTTCSCEEEEECCCCTTT--------HHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccC--------CcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 345667778899999988875443311 122333444555443 5787654321222 467778889999986
Q ss_pred CCC----C-CHHHHHHHhCC
Q 015201 316 DWT----V-DMADGRKRLGN 330 (411)
Q Consensus 316 d~~----~-di~~~~~~~g~ 330 (411)
... . -+.++.+.+|.
T Consensus 106 ~~~~~~~~~~~~~~~~~~g~ 125 (253)
T 1h5y_A 106 NTAAVRNPQLVALLAREFGS 125 (253)
T ss_dssp SHHHHHCTHHHHHHHHHHCG
T ss_pred ChHHhhCcHHHHHHHHHcCC
Confidence 421 1 25556677774
No 202
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=67.21 E-value=62 Score=30.05 Aligned_cols=145 Identities=10% Similarity=0.116 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHH-HHHHHHHHHHHHHh-hCCCCCEEEEec-CCc-ccHhHHhcCCCc
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQW-SEPYIREIVSLVRT-KCPETPIVLYIN-GNG-GFLERMKGTGVD 311 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef-~~Py~k~i~~~i~~-~~~g~~~~~H~C-G~~-~~l~~~~e~g~d 311 (411)
.+...+++..+.+.++|.- +||...+-+ -..++..++..+.+ ...++|+.+|.+ |.. ..+..-++.|++
T Consensus 33 ~~~avi~AAee~~sPvIlq-------~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFt 105 (288)
T 3q94_A 33 WTQAILAAAEEEKSPVILG-------VSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFT 105 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEE-------EEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHhCCCEEEE-------CChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCC
Confidence 3445556777788888742 233221110 12223333333322 112799999997 433 256677788999
Q ss_pred EEEcCCC-CC----HHHHHHHh----CCCeeE------EccCC-----cCccCCCHHHHHHHHHHHH-HHhCCCCeEEeC
Q 015201 312 VIGLDWT-VD----MADGRKRL----GNDISV------QGNVD-----PACLFSPLPALTDEIQRVV-KCAGSRGHILNL 370 (411)
Q Consensus 312 ~l~~d~~-~d----i~~~~~~~----g~~~~l------~G~vd-----~~~L~gt~eeV~~ev~~~i-~~~~~~gfIls~ 370 (411)
.+.+|.. .+ +...++.. .-.+++ .||.. ...++-+|||+.+.+++.= +.+ -.-+++
T Consensus 106 SVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~L---AvaiGt 182 (288)
T 3q94_A 106 SVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCL---APALGS 182 (288)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEE---EECSSC
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEE---EEEcCc
Confidence 9988743 23 33333322 111333 22221 1125678998887776431 111 111333
Q ss_pred CCCCC---CCCcHHHHHHHHHHH
Q 015201 371 GHGVL---VGTPEEAVAHFFEVG 390 (411)
Q Consensus 371 gc~i~---~~tp~Eni~a~~~a~ 390 (411)
.|++- |...++.++.+-+.+
T Consensus 183 ~HG~Y~~~p~Ld~~~L~~I~~~v 205 (288)
T 3q94_A 183 VHGPYKGEPNLGFAEMEQVRDFT 205 (288)
T ss_dssp BSSCCSSSCCCCHHHHHHHHHHH
T ss_pred ccCCcCCCCccCHHHHHHHHHhc
Confidence 45553 345667666665554
No 203
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=66.59 E-value=25 Score=30.68 Aligned_cols=125 Identities=14% Similarity=0.032 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH--------h---
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL--------E--- 303 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l--------~--- 303 (411)
+....|++.+.++|+|.+.++--.+ +++ ++.+++.+ |+.+. ..-....+ +
T Consensus 65 ~t~~~~v~~~~~~Gad~vtvh~~~g----~~~------------i~~~~~~~-gv~vl--~~t~~~~~~~~~~~~v~~~~ 125 (208)
T 2czd_A 65 NTNRLIARKVFGAGADYVIVHTFVG----RDS------------VMAVKELG-EIIMV--VEMSHPGALEFINPLTDRFI 125 (208)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESTTC----HHH------------HHHHHTTS-EEEEE--CCCCSGGGGTTTGGGHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEeccCC----HHH------------HHHHHHhC-CcEEE--EecCCcchhhHHHHHHHHHH
Confidence 4445678888899999987654332 222 44555553 33222 21111111 1
Q ss_pred -HHhcCCCcEEEcCCCC--CHHHHHHHhCCC-eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCC-CC
Q 015201 304 -RMKGTGVDVIGLDWTV--DMADGRKRLGND-ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLV-GT 378 (411)
Q Consensus 304 -~~~e~g~d~l~~d~~~--di~~~~~~~g~~-~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~-~t 378 (411)
.-.+.|++++.+.... .+.++++.++.+ ..+-|||.++. ++ ++++++.+. ..++.+.+ +-. .-
T Consensus 126 ~~a~~~G~~G~~~~~~~~~~i~~lr~~~~~~~~iv~gGI~~~g--~~-------~~~~~~aGa-d~vvvGr~--I~~a~d 193 (208)
T 2czd_A 126 EVANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQG--GK-------AKDAVKAGA-DYIIVGRA--IYNAPN 193 (208)
T ss_dssp HHHHHHCCSEEECCCSSTHHHHHHHHHSCTTCEEEECCCCSST--TH-------HHHHHHHTC-SEEEECHH--HHTSSS
T ss_pred HHHHHhCCcEEEECCCChHHHHHHHHhCCCCeEEEECCCCCCC--CC-------HHHHHHcCC-CEEEEChH--HhcCCC
Confidence 2235699988765432 567788888753 45778888751 22 455555433 34554433 322 12
Q ss_pred cHHHHHHHHHHH
Q 015201 379 PEEAVAHFFEVG 390 (411)
Q Consensus 379 p~Eni~a~~~a~ 390 (411)
|.+.++++.+..
T Consensus 194 p~~~~~~l~~~i 205 (208)
T 2czd_A 194 PREAAKAIYDEI 205 (208)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 567777776644
No 204
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=66.58 E-value=3.6 Score=37.05 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
+.++.+.++|+|.+++...-+.++..- .+.. ++++.+++.+ +.++..|.=.+.. +++.+.+.|+|++++
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~~---~~g~----~~v~~lr~~~-~~~~~vhlmv~dp~~~i~~~~~aGadgv~v 91 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPNI---TIGP----LIVDAIRPLT-KKTLDVHLMIVEPEKYVEDFAKAGADIISV 91 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCB---CBCH----HHHHHHGGGC-CSEEEEEEESSSGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcch---hhhH----HHHHHHHhhc-CCcEEEEEEccCHHHHHHHHHHcCCCEEEE
Confidence 455667788999987765333333210 1111 4556666654 4577777766543 578899999999865
No 205
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=66.23 E-value=1.2e+02 Score=30.85 Aligned_cols=155 Identities=15% Similarity=0.094 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhC-----CCEEEEecCC----CCCCCHHHHHHHHHHHHHHHHHH-HHhhCCCCCEEEEecCCcc-cHh
Q 015201 235 QAIADYIIYQVESG-----AHCIQIFDSW----GGQLPPHMWEQWSEPYIREIVSL-VRTKCPETPIVLYINGNGG-FLE 303 (411)
Q Consensus 235 d~~~~~~~~~~e~G-----~d~i~i~D~~----~~~iSp~~f~ef~~Py~k~i~~~-i~~~~~g~~~~~H~CG~~~-~l~ 303 (411)
+..++.++.+++.| ||.|-++-.+ +..+|++.=-+-+.|.++.+.+. ..+. .+ +.+-++-... ..+
T Consensus 249 ~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~-~~--vpISIDT~~a~Vae 325 (545)
T 2bmb_A 249 ESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQ-DK--VILSIDTYRSNVAK 325 (545)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCG-GG--EEEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC-CC--CeEEEeCCcHHHHH
Confidence 45566778899999 9999888532 34789887777788887777541 0000 02 3344444444 457
Q ss_pred HHhcCCCcEEE-cC---CCCCHHHHHHHh-CCCeeEEc--cCCcCc---c-CC-C-------------------------
Q 015201 304 RMKGTGVDVIG-LD---WTVDMADGRKRL-GNDISVQG--NVDPAC---L-FS-P------------------------- 346 (411)
Q Consensus 304 ~~~e~g~d~l~-~d---~~~di~~~~~~~-g~~~~l~G--~vd~~~---L-~g-t------------------------- 346 (411)
.-.+.|++++| +. ...++..+..++ |-.+++|- |.+..+ . +. +
T Consensus 326 aAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 405 (545)
T 2bmb_A 326 EAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDK 405 (545)
T ss_dssp HHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHH
T ss_pred HHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhcccccccccccccccc
Confidence 77778999996 42 234678888888 76677762 222111 1 11 1
Q ss_pred ---HHHHHHHHHHHHHHh---C-C-CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 347 ---LPALTDEIQRVVKCA---G-S-RGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 347 ---~eeV~~ev~~~i~~~---~-~-~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
.++|.++..+.++.+ | + ...|+-||.++. .+..+|+. +++..+++.
T Consensus 406 ~~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~-Kt~~~nl~-lL~~l~~l~ 459 (545)
T 2bmb_A 406 TVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFA-KTWKQNLQ-IIRHIPILK 459 (545)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS-CCHHHHHH-HHHTHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcc-cChHHHHH-HHHHHHHHH
Confidence 144555555555543 2 2 479999998874 35556654 444445443
No 206
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=65.56 E-value=51 Score=29.14 Aligned_cols=97 Identities=9% Similarity=0.060 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC---CcEE-EcCCCCCHHHHHHHhC-CCeeEEccCCcCc
Q 015201 269 QWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG---VDVI-GLDWTVDMADGRKRLG-NDISVQGNVDPAC 342 (411)
Q Consensus 269 ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g---~d~l-~~d~~~di~~~~~~~g-~~~~l~G~vd~~~ 342 (411)
+.-.|.+.++++.+.+. |.|+++|+-.... .++.+.+.+ ..++ +.. .-+...+++.+. .++-+ .++...
T Consensus 105 ~~~~~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~l~~~p~~~~~~i~H~~-~g~~~~~~~~l~~~~~y~--~~sg~~ 179 (265)
T 2gzx_A 105 DVQKEVFRKQIALAKRL--KLPIIIHNREATQDCIDILLEEHAEEVGGIMHSF-SGSPEIADIVTNKLNFYI--SLGGPV 179 (265)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHTTGGGTCEEETTC-CSCHHHHHHHHHTSCCEE--EECGGG
T ss_pred HHHHHHHHHHHHHHHHc--CCcEEEEecccHHHHHHHHHhcCCCCCcEEEEcC-CCCHHHHHHHHHHCCceE--Eeccee
Confidence 44567888888888888 7999999865544 457777776 3444 222 225666666553 22211 122111
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
..... +.++++++..+..+++++|+...
T Consensus 180 ~~~~~----~~~~~~i~~~~~dril~gSD~P~ 207 (265)
T 2gzx_A 180 TFKNA----KQPKEVAKHVSMERLLVETDAPY 207 (265)
T ss_dssp GCSSC----CHHHHHHHHSCTTTEEECCCTTS
T ss_pred ecCCc----HHHHHHHHhCChhhEEEccCCCC
Confidence 12222 24567788777789999999743
No 207
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=65.49 E-value=89 Score=29.91 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
..++-++.+.++|+|.|-+.-+ +.+. .+.+..+++.. .+|++.-+.=+......-.+.|+|.+.+
T Consensus 47 atv~Qi~~l~~aG~diVRvavp-----~~~~---------a~al~~I~~~~-~vPlvaDiHf~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVP-----HKED---------VEALEEIVKKS-PMPVIADIHFAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC-----SHHH---------HHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCC-----ChHH---------HHHHHHHHhcC-CCCEEEeCCCCHHHHHHHHHhCCCeEEE
Confidence 3445567788999999876432 3322 24455555554 6787754444444444467889999866
Q ss_pred CCCC--------CHHHHHHHhCCCeeE---EccCCcCcc--CC--CHHHHHHHHHHHHHHhC--C-CCeEEeCCCCCCCC
Q 015201 316 DWTV--------DMADGRKRLGNDISV---QGNVDPACL--FS--PLPALTDEIQRVVKCAG--S-RGHILNLGHGVLVG 377 (411)
Q Consensus 316 d~~~--------di~~~~~~~g~~~~l---~G~vd~~~L--~g--t~eeV~~ev~~~i~~~~--~-~gfIls~gc~i~~~ 377 (411)
.+.+ .+.++.+..+--+.+ +|.++..++ +| |+|..-+-+.+.++.+. + ..+++|.-.+
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S---- 187 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKGS---- 187 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECS----
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecC----
Confidence 4321 234444555654444 467887765 34 88887776666665543 2 5778775432
Q ss_pred CcHHHHHHHHHHHHhc
Q 015201 378 TPEEAVAHFFEVGKSM 393 (411)
Q Consensus 378 tp~Eni~a~~~a~~~y 393 (411)
-..+.+.|+...++++
T Consensus 188 ~v~~~i~ayr~la~~~ 203 (366)
T 3noy_A 188 DVLQNVRANLIFAERT 203 (366)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHhcc
Confidence 2345666666666664
No 208
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=64.85 E-value=27 Score=32.35 Aligned_cols=69 Identities=13% Similarity=0.059 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++.|+|++.+....|. .+|.++.++ +++.+.+...+ ++.+..++.. -+ ....+.
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~--------v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~ 90 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLE--------NLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDF 90 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHH--------HHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH--------HHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhc
Confidence 4445666788899999988877774 699987655 45555554334 7777766543 23 445678
Q ss_pred CCcEEE
Q 015201 309 GVDVIG 314 (411)
Q Consensus 309 g~d~l~ 314 (411)
|+|++.
T Consensus 91 Gadavl 96 (293)
T 1w3i_A 91 DIVGIA 96 (293)
T ss_dssp CCSEEE
T ss_pred CCCEEE
Confidence 999984
No 209
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=64.72 E-value=81 Score=31.19 Aligned_cols=123 Identities=16% Similarity=0.132 Sum_probs=71.0
Q ss_pred HHHHHHhCCCEEEEecC-----CCCC--CCHHHHHHHHHHHHHHHHHHHHhhCCCCC---EEEEec-CCc----------
Q 015201 241 IIYQVESGAHCIQIFDS-----WGGQ--LPPHMWEQWSEPYIREIVSLVRTKCPETP---IVLYIN-GNG---------- 299 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~-----~~~~--iSp~~f~ef~~Py~k~i~~~i~~~~~g~~---~~~H~C-G~~---------- 299 (411)
+++..+.+...|.-... .++. +.|+.|..++ +++++.. ++| +++|.+ |..
T Consensus 38 l~aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V----~~~A~~~-----~vPv~pV~LhlDHg~~~~w~~~~~~~ 108 (450)
T 3txv_A 38 MLRAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFV----GAIADRI-----EFPREKILLGGDHLGPNPWKHLPADE 108 (450)
T ss_dssp HHHHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHH----HHHHHHT-----TCCGGGEEEEEEEESSGGGTTSCHHH
T ss_pred HHHHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHH----HHHHHHc-----CcCcccEEEECCCCCCcccccccHHH
Confidence 34556667777643322 1343 5566666554 4444433 466 688886 432
Q ss_pred ------ccHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC-------C--C
Q 015201 300 ------GFLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG-------S--R 364 (411)
Q Consensus 300 ------~~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~-------~--~ 364 (411)
..+...++.|+..+.+|..+ .++--|+ .-|.+-|.+.++++++.+. . -
T Consensus 109 am~~a~e~i~~aI~AGFtSVMiD~S~------------~p~eeNi-----~lt~evva~rtaeL~~~A~~~~~~~g~~e~ 171 (450)
T 3txv_A 109 AMAKAEAMITAYAKAGFTKLHLDTSM------------GCAGEPT-----ALPDATTAARAARLAAVAEDAVGGRGGVLP 171 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEECCCB------------CCSSSCS-----BCCHHHHHHHHHHHHHHHHHTC------CC
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCC------------Cchhhcc-----chhHHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 24556667898888887543 1111122 2477778788887776542 1 2
Q ss_pred CeEEeCCCCCCC----------CCcHHHHHHHHHH
Q 015201 365 GHILNLGHGVLV----------GTPEEAVAHFFEV 389 (411)
Q Consensus 365 gfIls~gc~i~~----------~tp~Eni~a~~~a 389 (411)
++++++--.+|. -|+||..++++++
T Consensus 172 ~yviGtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~ 206 (450)
T 3txv_A 172 VYIIGTEVPIPGGALEELDTLEVTAPEAAIETVRV 206 (450)
T ss_dssp EEEEECC-------------CCCCCHHHHHHHHHH
T ss_pred eEEeeeecCCCCccccccccCCCCCHHHHHHHHHH
Confidence 788887433322 4889999888875
No 210
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=64.60 E-value=17 Score=33.81 Aligned_cols=122 Identities=13% Similarity=0.238 Sum_probs=68.5
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 57 ~~v~~~~~~~~~gr~pvi~Gvg~~-----------~-------------------------t~~ai~la~~a~~~Gadav 100 (291)
T 3a5f_A 57 KETIKFVIDKVNKRIPVIAGTGSN-----------N-------------------------TAASIAMSKWAESIGVDGL 100 (291)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCcc-----------c-------------------------HHHHHHHHHHHHhcCCCEE
Confidence 344555666677788988766441 0 1233566777788999999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHhcCCCcEEEc-CCCCCHHH-
Q 015201 253 QIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMKGTGVDVIGL-DWTVDMAD- 323 (411)
Q Consensus 253 ~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~e~g~d~l~~-d~~~di~~- 323 (411)
.+.-++-.-.|+ +=+.-|++++.+.. +.|++++.. |.. . .+..+.+.+ ++..+ +..-|+..
T Consensus 101 lv~~P~y~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~s~gd~~~~ 170 (291)
T 3a5f_A 101 LVITPYYNKTTQ----KGLVKHFKAVSDAV-----STPIIIYNVPGRTGLNITPGTLKELCEDK-NIVAVXEASGNISQI 170 (291)
T ss_dssp EEECCCSSCCCH----HHHHHHC-CTGGGC-----CSCEEEEECHHHHSCCCCHHHHHHHTTST-TEEEEEECSCCHHHH
T ss_pred EEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcCC-CEEEEeCCCCCHHHH
Confidence 877665433454 34455666666544 578888774 321 2 234444443 45554 33345544
Q ss_pred --HHHHhCCCeeEEccCCc
Q 015201 324 --GRKRLGNDISVQGNVDP 340 (411)
Q Consensus 324 --~~~~~g~~~~l~G~vd~ 340 (411)
+.+..+++..+..|-|.
T Consensus 171 ~~~~~~~~~~f~v~~G~d~ 189 (291)
T 3a5f_A 171 AQIKALCGDKLDIYSGNDD 189 (291)
T ss_dssp HHHHHHHGGGSEEEESCGG
T ss_pred HHHHHhcCCCeEEEeCcHH
Confidence 34444545555555454
No 211
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=64.26 E-value=10 Score=39.99 Aligned_cols=125 Identities=13% Similarity=0.196 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHhCCCEEEE---ecCCCCCC--CHH-HHHHHHHHH----HHHHHHHHHhhCCCCCEEEEecCCc---
Q 015201 233 LTQAIADYIIYQVESGAHCIQI---FDSWGGQL--PPH-MWEQWSEPY----IREIVSLVRTKCPETPIVLYINGNG--- 299 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i---~D~~~~~i--Sp~-~f~ef~~Py----~k~i~~~i~~~~~g~~~~~H~CG~~--- 299 (411)
-++..++|++...+.|.+.+.+ -+.|.+.+ +.+ .| .|..|| +++|+++.+++ |+.+++|.--..
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~f-d~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~ 445 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVF-DFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVR 445 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCC-CSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccc-cccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchh
Confidence 4567788888889999999977 54554321 110 00 123344 88999999998 677777776432
Q ss_pred ---c----cHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCC-eEEeCC
Q 015201 300 ---G----FLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRG-HILNLG 371 (411)
Q Consensus 300 ---~----~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~g-fIls~g 371 (411)
. .++.+.++|+.++=+|+--| .+|-.. ....++.-+.-.++++.+.+.+ .|-.=|
T Consensus 446 n~e~~~d~~f~~~~~~Gv~GVKvdF~g~----------------~~~r~~-~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 446 NYERHMDKAYQFMADNGYNSVKSGYVGN----------------IIPRGE-HHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEECCSS----------------CBSTTC-CTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred hHHHHHHHHHHHHHHcCCCEEEeCcccc----------------CcCCcc-cccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 1 24667788988887766322 111110 1124777788888888887644 444445
Q ss_pred CCCCCC
Q 015201 372 HGVLVG 377 (411)
Q Consensus 372 c~i~~~ 377 (411)
|..|.|
T Consensus 509 ~~kPtG 514 (738)
T 2d73_A 509 ATRPTG 514 (738)
T ss_dssp SCCCCS
T ss_pred CcCCCc
Confidence 666654
No 212
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=64.07 E-value=19 Score=34.69 Aligned_cols=67 Identities=18% Similarity=0.184 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.++++|+|.|.+ |...+ .++ ...+.++.+++..|+++++...+........+.+.|+|.+.+
T Consensus 110 ~~~~~~lieaGvd~I~i-dta~G--~~~--------~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLI-DSSHG--HSE--------GVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEE-ECSCT--TSH--------HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEE-eCCCC--CCH--------HHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 35577888999999865 32222 122 233345666666557777766665555567778899999876
No 213
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=63.88 E-value=28 Score=32.16 Aligned_cols=71 Identities=7% Similarity=0.127 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e 307 (411)
+.+.++++.+++.|+|++.+....|. .+|.++.++. ++.+.+...+ ++.++.++.. -+ ....+
T Consensus 19 ~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v--------~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~ 88 (286)
T 2r91_A 19 ELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMEL--------TDAATSAARR--VIVQVASLNADEAIALAKYAES 88 (286)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHH--------HHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHH--------HHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHh
Confidence 34456667888999999988877774 6999887664 3444333224 6777766543 23 45567
Q ss_pred CCCcEEEc
Q 015201 308 TGVDVIGL 315 (411)
Q Consensus 308 ~g~d~l~~ 315 (411)
.|+|++.+
T Consensus 89 ~Gadavlv 96 (286)
T 2r91_A 89 RGAEAVAS 96 (286)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999853
No 214
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=63.80 E-value=29 Score=32.15 Aligned_cols=94 Identities=15% Similarity=0.065 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCCc----EEEcCCCCCHHHHHHHhCC--CeeEEccCCcCc
Q 015201 270 WSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGVD----VIGLDWTVDMADGRKRLGN--DISVQGNVDPAC 342 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~d----~l~~d~~~di~~~~~~~g~--~~~l~G~vd~~~ 342 (411)
.=...+++.++.+++. +.|+++|+-.... .++.+.+.+.. +++. +.-+..++++.+.- .+.+.| ..
T Consensus 111 ~Q~~~F~~ql~lA~e~--~lPv~iH~r~a~~~~l~il~~~~~~~~~~V~H~-fsG~~e~a~~~l~~G~yis~~g----~i 183 (287)
T 3rcm_A 111 LQEKALEAQLTLAAQL--RLPVFLHERDASERLLAILKDYRDHLTGAVVHC-FTGEREALFAYLDLDLHIGITG----WI 183 (287)
T ss_dssp HHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHTTGGGCSCEEECS-CCCCHHHHHHHHHTTCEEEECG----GG
T ss_pred HHHHHHHHHHHHHHHh--CCCEEEEcCCcHHHHHHHHHHcCCCCCeEEEEe-CCCCHHHHHHHHHCCcEEEECc----hh
Confidence 3455677777778777 7999999987765 56777776542 3443 23367777766532 233332 22
Q ss_pred cC-CCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 343 LF-SPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 343 L~-gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
.+ ...+++ +++++.....++++.|++..
T Consensus 184 ~~~k~~~~l----~~~v~~ip~drlLlETD~P~ 212 (287)
T 3rcm_A 184 CDERRGTHL----HPLVGNIPEGRLMLESDAPY 212 (287)
T ss_dssp GCTTTCGGG----HHHHTTSCTTSEEECCCTTS
T ss_pred ccccCHHHH----HHHHHhcCCccEEEeccCCc
Confidence 22 223334 44455444479999999864
No 215
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=63.51 E-value=24 Score=33.98 Aligned_cols=91 Identities=15% Similarity=0.095 Sum_probs=55.6
Q ss_pred hhCHHHHHHHHHHHHH------------------------HHHHHHHHHHHhCCCEEEEecCCCC--------------C
Q 015201 220 HTAPHVLRTLLSHLTQ------------------------AIADYIIYQVESGAHCIQIFDSWGG--------------Q 261 (411)
Q Consensus 220 ~~~Pe~v~~ll~~~~d------------------------~~~~~~~~~~e~G~d~i~i~D~~~~--------------~ 261 (411)
..+|+.+.++++.+.+ .+.+.++.+.++|+|+|.+.....+ -
T Consensus 195 l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gG 274 (367)
T 3zwt_A 195 LQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGG 274 (367)
T ss_dssp GGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSE
T ss_pred cCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCC
Confidence 4679999998887754 3456778888999999988754321 2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCcc---cHhHHhcCCCcEEEcC
Q 015201 262 LPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGG---FLERMKGTGVDVIGLD 316 (411)
Q Consensus 262 iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~---~l~~~~e~g~d~l~~d 316 (411)
+|..-. +|..-+++..+++..+ .+|++ .+|.+. ....+.+.|+|.+.+.
T Consensus 275 lSG~~i----~p~a~~~v~~i~~~v~~~ipvI--~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 275 LSGKPL----RDLSTQTIREMYALTQGRVPII--GVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp EEEGGG----HHHHHHHHHHHHHHTTTCSCEE--EESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cCCccc----chhHHHHHHHHHHHcCCCceEE--EECCCCCHHHHHHHHHcCCCEEEEC
Confidence 343322 3333344444444432 46644 566654 2444455799888764
No 216
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=63.24 E-value=95 Score=28.75 Aligned_cols=85 Identities=14% Similarity=0.185 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCC--C-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec---CCc--c-
Q 015201 230 LSHLTQAIADYIIYQVESGAHCIQIFDSWG--G-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN---GNG--G- 300 (411)
Q Consensus 230 l~~~~d~~~~~~~~~~e~G~d~i~i~D~~~--~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C---G~~--~- 300 (411)
+|.|.+. .+-+.+..++|||.|-+.+... | --|+..+ +.+++.. ++|+..-+. |+- +
T Consensus 42 lEvc~~s-~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i------------~~a~~~~-~ipV~vMIRPRgGdF~Ys~ 107 (287)
T 3iwp_A 42 MEVCVDS-VESAVNAERGGADRIELCSGLSEGGTTPSMGVL------------QVVKQSV-QIPVFVMIRPRGGDFLYSD 107 (287)
T ss_dssp EEEEESS-HHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHH------------HHHHTTC-CSCEEEECCSSSSCSCCCH
T ss_pred EEEEeCC-HHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHH------------HHHHHhc-CCCeEEEEecCCCCcccCH
Confidence 3444433 2345566788999999998643 4 3444443 3333332 566544443 321 1
Q ss_pred --------cHhHHhcCCCcEEEcC-----CCCCHHHHHHHh
Q 015201 301 --------FLERMKGTGVDVIGLD-----WTVDMADGRKRL 328 (411)
Q Consensus 301 --------~l~~~~e~g~d~l~~d-----~~~di~~~~~~~ 328 (411)
.++.+++.|+|++.+. ...|....++.+
T Consensus 108 ~E~~~M~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li 148 (287)
T 3iwp_A 108 REIEVMKADIRLAKLYGADGLVFGALTEDGHIDKELCMSLM 148 (287)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHH
Confidence 2455667888888653 346776666554
No 217
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=63.23 E-value=29 Score=32.14 Aligned_cols=71 Identities=10% Similarity=0.045 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKG 307 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e 307 (411)
+.+.++++.+++.|+|++.+..+.|. .+|.++.++ +++.+.+...| ++.++.++.. -+ ....+
T Consensus 20 ~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~--------v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 20 DALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQ--------NLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNE 89 (288)
T ss_dssp HHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHH--------HHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH--------HHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHh
Confidence 34455666788899999988877774 699988665 44555444334 6777766543 23 45567
Q ss_pred CCCcEEEc
Q 015201 308 TGVDVIGL 315 (411)
Q Consensus 308 ~g~d~l~~ 315 (411)
.|+|++.+
T Consensus 90 ~Gadavlv 97 (288)
T 2nuw_A 90 MDILGVSS 97 (288)
T ss_dssp SCCSEEEE
T ss_pred cCCCEEEE
Confidence 89999853
No 218
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=62.80 E-value=59 Score=30.98 Aligned_cols=60 Identities=10% Similarity=0.081 Sum_probs=37.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.+.+.|+|+|.+.-. ..++ ++++.+++. +++ +.+.|.+........+.|+|.+.+
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g---~~~~------------~~i~~~~~~--g~~-v~~~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFG---VPDR------------EVIARLRRA--GTL-TLVTATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESS---CCCH------------HHHHHHHHT--TCE-EEEEESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCC---CCcH------------HHHHHHHHC--CCe-EEEECCCHHHHHHHHHcCCCEEEE
Confidence 34566777899999877421 1122 345555665 565 456666544556677889999866
No 219
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=62.62 E-value=21 Score=33.88 Aligned_cols=65 Identities=22% Similarity=0.272 Sum_probs=45.6
Q ss_pred HHHHHHHHhCCCEEEEecCCC----------CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcC
Q 015201 239 DYIIYQVESGAHCIQIFDSWG----------GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGT 308 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~----------~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~ 308 (411)
+.++.+.+.|++.+-++-+-+ ..++++.+ +++++.++++ |.++..|..|... ++...+.
T Consensus 171 ~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l--------~~~~~~A~~~--g~~v~~H~~~~~~-i~~~~~~ 239 (403)
T 3gnh_A 171 KAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEM--------KAVVDEAHMA--GIKVAAHAHGASG-IREAVRA 239 (403)
T ss_dssp HHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHH--------HHHHHHHHHT--TCEEEEEECSHHH-HHHHHHT
T ss_pred HHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHH--------HHHHHHHHHC--CCEEEEEeCCHHH-HHHHHHh
Confidence 445566678999887764311 15676654 5678888887 7899999977543 6667788
Q ss_pred CCcEEE
Q 015201 309 GVDVIG 314 (411)
Q Consensus 309 g~d~l~ 314 (411)
|++.+.
T Consensus 240 g~~~i~ 245 (403)
T 3gnh_A 240 GVDTIE 245 (403)
T ss_dssp TCSEEE
T ss_pred CCCEEe
Confidence 998873
No 220
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=62.57 E-value=54 Score=29.19 Aligned_cols=103 Identities=10% Similarity=0.040 Sum_probs=59.0
Q ss_pred HHHHHH---HHHhhCCCCCEEEEecCCcc--cHhHHhcCC-CcEE---EcCCCC-----------CHHHHHHHhC-CCee
Q 015201 275 IREIVS---LVRTKCPETPIVLYINGNGG--FLERMKGTG-VDVI---GLDWTV-----------DMADGRKRLG-NDIS 333 (411)
Q Consensus 275 ~k~i~~---~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g-~d~l---~~d~~~-----------di~~~~~~~g-~~~~ 333 (411)
..+.++ .++++ |..+.+=.+..+. .++.+.+.| +|.+ +++... .+.++++..+ -.+.
T Consensus 100 ~~~~i~~~~~i~~~--G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~ 177 (227)
T 1tqx_A 100 TERCIQLAKEIRDN--NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQ 177 (227)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEE
Confidence 345667 88887 5555555544443 477777875 8887 433211 2456666663 2355
Q ss_pred EEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHh
Q 015201 334 VQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKS 392 (411)
Q Consensus 334 l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~ 392 (411)
+-|||++. .++++++.+. ..+|.+++--=.++ |.++++.+.+..++
T Consensus 178 VdGGI~~~-----------ti~~~~~aGA-d~~V~GsaIf~~~d-~~~~i~~l~~~~~~ 223 (227)
T 1tqx_A 178 VDGGLNIE-----------TTEISASHGA-NIIVAGTSIFNAED-PKYVIDTMRVSVQK 223 (227)
T ss_dssp EESSCCHH-----------HHHHHHHHTC-CEEEESHHHHTCSS-HHHHHHHHHHHHHH
T ss_pred EECCCCHH-----------HHHHHHHcCC-CEEEEeHHHhCCCC-HHHHHHHHHHHHHH
Confidence 67888762 4455555543 35666544111123 67888888776654
No 221
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=62.54 E-value=24 Score=33.94 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
..+.++.++++|+|.|.+.-+.+. +. ...++++.+++.+++++++.=.+........+.+.|+|.+.+
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~--~~---------~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAH--AK---------YVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCS--SH---------HHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC--cH---------hHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 456678889999998755323321 21 224556667666456776642344434456788899999975
No 222
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=62.13 E-value=38 Score=32.53 Aligned_cols=97 Identities=10% Similarity=0.036 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhCCCCCEEEEecC--Ccc--cHhHHhcCCCc---EE--EcCC-CCCHHHHHHHh--CCCeeEEccCCcCc
Q 015201 275 IREIVSLVRTKCPETPIVLYING--NGG--FLERMKGTGVD---VI--GLDW-TVDMADGRKRL--GNDISVQGNVDPAC 342 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG--~~~--~l~~~~e~g~d---~l--~~d~-~~di~~~~~~~--g~~~~l~G~vd~~~ 342 (411)
++..++..++. |+|+++|+.| ... .++.+.+.|++ ++ |++. ..|...+++.+ |-.+.|-|..-...
T Consensus 192 f~aq~~~A~~~--glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~ 269 (364)
T 3k2g_A 192 LRGAARAQVRT--GLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFF 269 (364)
T ss_dssp HHHHHHHHHHH--CCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCE
T ss_pred HHHHHHHHHHH--CCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCccccc
Confidence 34445555555 7999999843 433 46778887765 22 5553 33777776653 65555554311000
Q ss_pred c------CCCHHHHHHHHHHHHHHhCCCCeEEeCCCC
Q 015201 343 L------FSPLPALTDEIQRVVKCAGSRGHILNLGHG 373 (411)
Q Consensus 343 L------~gt~eeV~~ev~~~i~~~~~~gfIls~gc~ 373 (411)
. .-+.++-.+.++++++......++|++++.
T Consensus 270 f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p 306 (364)
T 3k2g_A 270 YADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVF 306 (364)
T ss_dssp ETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred ccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCC
Confidence 1 124455667778888876547999999985
No 223
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=61.90 E-value=55 Score=30.56 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=50.8
Q ss_pred HHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 015201 173 GDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCI 252 (411)
Q Consensus 173 ~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i 252 (411)
.+.++...+..++++|++..+++. + ++-.++.++...++|+|++
T Consensus 64 ~~v~~~~~~~~~grvpviaGvg~~-----------~-------------------------t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 64 DVLTRTILEHVAGRVPVIVTTSHY-----------S-------------------------TQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCS-----------S-------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCc-----------h-------------------------HHHHHHHHHHHHHcCCCEE
Confidence 345555666677789988776442 0 1333566667778899998
Q ss_pred EEecCCCC---CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 253 QIFDSWGG---QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 253 ~i~D~~~~---~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
.+.-++-. -.|+ +=+.-|++.+.+.. ++|++++..
T Consensus 108 lv~~Pyy~~~~~~s~----~~l~~~f~~va~a~-----~lPiilYn~ 145 (309)
T 3fkr_A 108 MAMPPYHGATFRVPE----AQIFEFYARVSDAI-----AIPIMVQDA 145 (309)
T ss_dssp EECCSCBTTTBCCCH----HHHHHHHHHHHHHC-----SSCEEEEEC
T ss_pred EEcCCCCccCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeC
Confidence 77666431 2344 44556788888776 468877765
No 224
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=61.45 E-value=60 Score=32.08 Aligned_cols=147 Identities=12% Similarity=0.063 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHhCCCEEEEec-CC---CCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCcc-cHhHHhc--
Q 015201 236 AIADYIIYQVESGAHCIQIFD-SW---GGQLPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGG-FLERMKG-- 307 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D-~~---~~~iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~-~l~~~~e-- 307 (411)
..++.++.+++.|||.|-++- +. +..+|++.=-+-+.|..+.+.+...+. + ++|+ =++-... .++.-.+
T Consensus 213 ~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~-~~~vpI--SIDT~~~~VaeaAL~~~ 289 (442)
T 3mcm_A 213 QRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANL-IYKPLV--SIDTRKLEVMQKILAKH 289 (442)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTC-SSCCEE--EEECCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhcccc-CCCCeE--EEeCCCHHHHHHHHhhC
Confidence 345667889999999998874 22 237888876677788777665522111 1 4443 3444433 4566666
Q ss_pred CCCcE-EE-cCCCC--CHHHHHHHhCCCeeEEccC-CcCccC-----CCHHHHHHHHHHHHHHh---C-C-CCeEEeCCC
Q 015201 308 TGVDV-IG-LDWTV--DMADGRKRLGNDISVQGNV-DPACLF-----SPLPALTDEIQRVVKCA---G-S-RGHILNLGH 372 (411)
Q Consensus 308 ~g~d~-l~-~d~~~--di~~~~~~~g~~~~l~G~v-d~~~L~-----gt~eeV~~ev~~~i~~~---~-~-~gfIls~gc 372 (411)
.|+++ +| +.... .+..+.+++|-.+++|=.- .|..+. .-.+++.++.++.++.+ | + ...|+-||-
T Consensus 290 aGa~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGi 369 (442)
T 3mcm_A 290 HDIIWMINDVECNNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGF 369 (442)
T ss_dssp GGGCCEEEECCCTTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECCC
T ss_pred CCCCEEEEcCCCCCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCC
Confidence 79998 74 43322 3556667788767765211 111111 11223445444444433 3 3 579999998
Q ss_pred CCCCCCcHHHHHHH
Q 015201 373 GVLVGTPEEAVAHF 386 (411)
Q Consensus 373 ~i~~~tp~Eni~a~ 386 (411)
++. .+..+|+..+
T Consensus 370 GF~-Kt~~~nl~lL 382 (442)
T 3mcm_A 370 GFG-KKSDTARYLL 382 (442)
T ss_dssp C-------------
T ss_pred CCC-CCHHHHHHHH
Confidence 874 3344555443
No 225
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=61.33 E-value=90 Score=27.83 Aligned_cols=158 Identities=17% Similarity=0.094 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-----ccH-hHHh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-----GFL-ERMK 306 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-----~~l-~~~~ 306 (411)
+.+.+.++...+.|++.+.+.-.... ..+++.| +.+...++++.+.++++ |+.+.+|.+... ..+ ..+.
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~~~~~l~~ 160 (286)
T 3dx5_A 84 EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQER-QEYVNRIRMICELFAQH--NMYVLLETHPNTLTDTLPSTLELLG 160 (286)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHH-HHHHHHHHHHHHHHHHT--TCEEEEECCTTSTTSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHH-HHHHHHHHHHHHHHHHh--CCEEEEecCCCcCcCCHHHHHHHHH
Confidence 34455566677789999876433221 3445555 66788899999999887 788899998432 112 3333
Q ss_pred cCCCcE--EEcC------CCCCHHHHHHHhCCCeeEE--ccCCc--------------------C-c-c-CCCHHHHHHH
Q 015201 307 GTGVDV--IGLD------WTVDMADGRKRLGNDISVQ--GNVDP--------------------A-C-L-FSPLPALTDE 353 (411)
Q Consensus 307 e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~--G~vd~--------------------~-~-L-~gt~eeV~~e 353 (411)
+.+-+. +.+| ...|+.+..+++++++..+ -+.+. . . + .|..+ . ..
T Consensus 161 ~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~G~id-~-~~ 238 (286)
T 3dx5_A 161 EVDHPNLKINLDFLHIWESGADPVDSFQQLRPWIQHYHFKNISSADYLHVFEPNNVYAAAGNRTGMVPLFEGIVN-Y-DE 238 (286)
T ss_dssp HHCCTTEEEEEEHHHHHHTTCCHHHHHHHHGGGEEEEEECEESCGGGGGGGSHHHHHSTTCCCTTEECGGGSSSC-H-HH
T ss_pred hcCCCCeEEEeccccHhhcCCCHHHHHHHHHhHheEEEecCCcccccccccCccccccccCcceeeeccCCCcCC-H-HH
Confidence 444332 3333 2458888888888765442 11111 0 1 1 23321 1 23
Q ss_pred HHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCCCCCCCCc
Q 015201 354 IQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKYDNSSQNH 402 (411)
Q Consensus 354 v~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~~~~~~~~ 402 (411)
+.+.++.. +|-+++- +.+.-|.+.++.-++..+++..+...+++
T Consensus 239 i~~~L~~~-~g~~~lE----~~~~d~~~~~~~s~~~Lr~~~~~~~~~~~ 282 (286)
T 3dx5_A 239 IIQEVRDT-DHFASLE----WFGHNAKDILKAEMKVLTNRNLEVVTSEN 282 (286)
T ss_dssp HHHHHTTS-SCEEEEC----CCSSCHHHHHHHHHHHHHHCC--------
T ss_pred HHHHHHhc-CCCEEEE----EeCCCHHHHHHHHHHHHHhcCceEeeccc
Confidence 33333333 4344443 33356788999999999998877766643
No 226
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=61.08 E-value=5.3 Score=37.36 Aligned_cols=122 Identities=16% Similarity=0.153 Sum_probs=71.5
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 218 MCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
.+|.+||.+.++.+ +.|+|.+.++=... |....+ -++=...+++|-+.+ ++|+++|-.
T Consensus 156 ~~yT~Peea~~Fv~--------------~TgvD~LAvaiGt~HG~Y~~~--p~Ld~~~L~~I~~~v-----~vpLVlHGg 214 (288)
T 3q94_A 156 VIYADPAECKHLVE--------------ATGIDCLAPALGSVHGPYKGE--PNLGFAEMEQVRDFT-----GVPLVLHGG 214 (288)
T ss_dssp CBCCCHHHHHHHHH--------------HHCCSEEEECSSCBSSCCSSS--CCCCHHHHHHHHHHH-----CSCEEECCC
T ss_pred ccCCCHHHHHHHHH--------------HHCCCEEEEEcCcccCCcCCC--CccCHHHHHHHHHhc-----CCCEEEeCC
Confidence 36899998887766 45889765542211 221100 011122233444433 589999976
Q ss_pred CCc-c-cHhHHhcCCCcEEEcCCCCC---HHHHHHHhCCCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCC
Q 015201 297 GNG-G-FLERMKGTGVDVIGLDWTVD---MADGRKRLGNDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGS 363 (411)
Q Consensus 297 G~~-~-~l~~~~e~g~d~l~~d~~~d---i~~~~~~~g~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~ 363 (411)
-.. . .+...++.|+.-+|++...- ...+++.+..+- ...||..+ ....+.+.+.+++.++.++.
T Consensus 215 SG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~~~~---~~~dpr~~~~~~~~a~~~~v~~~~~~~gs 284 (288)
T 3q94_A 215 TGIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDQ---EVYDPRKFIGPGRDAIKATVIGKIREFGS 284 (288)
T ss_dssp TTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCS---SCCCTHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHHHhCC---CcCCHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 333 3 47778889999999965221 122344342211 34677644 45568899999999998864
No 227
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=60.43 E-value=75 Score=28.39 Aligned_cols=78 Identities=19% Similarity=0.172 Sum_probs=46.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVI 313 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l 313 (411)
.++++.+.++|++.|.+.|..+. .-+.. ..++++.+++.. ++|+++ .|... .++.+.+.|+|.+
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g~---------~~~~i~~i~~~~-~iPvi~--~ggi~~~~~i~~~~~~Gad~v 100 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSGY---------DTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADKA 100 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSCC---------CHHHHHHHGGGC-CSCEEE--ESCCCSTHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCcc---------cHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCcHh
Confidence 45677788899999999885442 11111 123333444443 678765 34443 3677778899998
Q ss_pred EcCC-CC----CHHHHHHH
Q 015201 314 GLDW-TV----DMADGRKR 327 (411)
Q Consensus 314 ~~d~-~~----di~~~~~~ 327 (411)
.+.. .. ++..+++.
T Consensus 101 ~lg~~~~~~~~~~~~~~~~ 119 (266)
T 2w6r_A 101 LAASVFHFREIDMRELKEY 119 (266)
T ss_dssp ECCCCC------CHHHHHH
T ss_pred hhhHHHHhCCCCHHHHHHH
Confidence 7743 22 55566664
No 228
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=60.08 E-value=22 Score=33.42 Aligned_cols=67 Identities=16% Similarity=0.168 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE-ec-CCcc--cHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY-IN-GNGG--FLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H-~C-G~~~--~l~~~~e~g~ 310 (411)
+-.++.++++.++|||+|++. ++-|++++++| .+.+. ++|+.+- .. |... -.+.+.++|+
T Consensus 170 deAi~Ra~ay~eAGAD~ifi~----g~~~~~ei~~~--------~~~~~----~~Pl~~n~~~~g~~p~~~~~eL~~lGv 233 (302)
T 3fa4_A 170 EESVARLRAARDAGADVGFLE----GITSREMARQV--------IQDLA----GWPLLLNMVEHGATPSISAAEAKEMGF 233 (302)
T ss_dssp HHHHHHHHHHHTTTCSEEEET----TCCCHHHHHHH--------HHHTT----TSCEEEECCTTSSSCCCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEeec----CCCCHHHHHHH--------HHHhc----CCceeEEEecCCCCCCCCHHHHHHcCC
Confidence 445677889999999999762 24678877664 34443 3576443 33 3443 2688999999
Q ss_pred cEEEcCC
Q 015201 311 DVIGLDW 317 (411)
Q Consensus 311 d~l~~d~ 317 (411)
..+++..
T Consensus 234 ~~v~~~~ 240 (302)
T 3fa4_A 234 RIIIFPF 240 (302)
T ss_dssp SEEEETT
T ss_pred CEEEEch
Confidence 9987754
No 229
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=60.08 E-value=81 Score=28.25 Aligned_cols=122 Identities=15% Similarity=0.086 Sum_probs=65.6
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-------CCCEEEEecCCcc--cHhHHhcCC
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCP-------ETPIVLYINGNGG--FLERMKGTG 309 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~-------g~~~~~H~CG~~~--~l~~~~e~g 309 (411)
.|++.+.++|||++.++..... ...++++.+++.+. |..+.+-.+..+. .++.+.+ +
T Consensus 83 ~~i~~~~~aGAd~itvH~ea~~-------------~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~-~ 148 (237)
T 3cu2_A 83 EVAKAVVANGANLVTLQLEQYH-------------DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLD-Q 148 (237)
T ss_dssp HHHHHHHHTTCSEEEEETTCTT-------------SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTT-T
T ss_pred HHHHHHHHcCCCEEEEecCCcc-------------cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhh-c
Confidence 5777888999999887644321 12456777776510 2334554554432 3444443 5
Q ss_pred CcEE---EcCCCC-----------CHHHHHHHhC-----CCeeEEccCCcCccCCCHHHHHHHHHHHHH--HhCCCCeEE
Q 015201 310 VDVI---GLDWTV-----------DMADGRKRLG-----NDISVQGNVDPACLFSPLPALTDEIQRVVK--CAGSRGHIL 368 (411)
Q Consensus 310 ~d~l---~~d~~~-----------di~~~~~~~g-----~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~--~~~~~gfIl 368 (411)
+|.+ +++... .+.++++..+ -.+.+-|||++ +.+.++++ . |..++|.
T Consensus 149 ~D~vlvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~-----------~~~~~~~~~~a-Gad~~Vv 216 (237)
T 3cu2_A 149 IDVIQLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTL-----------ELAKYFKQGTH-QIDWLVS 216 (237)
T ss_dssp CSEEEEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCH-----------HHHHHHHHSSS-CCCCEEE
T ss_pred CceeeeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCH-----------HHHHHHHHhCC-CCcEEEE
Confidence 7766 222211 2455666653 23555677765 23344444 3 3347777
Q ss_pred eCCCCCCCCCcHHHHHHHHH
Q 015201 369 NLGHGVLVGTPEEAVAHFFE 388 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~ 388 (411)
++. +-..-|.++++.+.+
T Consensus 217 GSa--If~~d~~~~~~~l~~ 234 (237)
T 3cu2_A 217 GSA--LFSGELKTNLKVWKS 234 (237)
T ss_dssp CGG--GGSSCHHHHHHHHHH
T ss_pred eeH--HhCCCHHHHHHHHHH
Confidence 765 222125577777754
No 230
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=60.00 E-value=24 Score=33.05 Aligned_cols=60 Identities=18% Similarity=0.232 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
+-++..+++|+|.|.+ |. |||++.++.+ +.++. . +.+-..|+++ .+..+.++|+|.+++.
T Consensus 218 ~e~~eAl~aGaDiImL-Dn----~s~~~l~~av--------~~~~~---~--v~leaSGGIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 218 SQVEESLSNNVDMILL-DN----MSISEIKKAV--------DIVNG---K--SVLEVSGCVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHHHH--------HHHTT---S--SEEEEESSCCTTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHHHH--------HhhcC---c--eEEEEECCCCHHHHHHHHHcCCCEEEeC
Confidence 3455567789999844 43 7887766644 34432 2 4566778876 5999999999999874
No 231
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=60.00 E-value=38 Score=30.16 Aligned_cols=94 Identities=10% Similarity=0.021 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC---c-EEEcCCCCCHHHHHHHhCC--CeeEEccCCcCcc
Q 015201 271 SEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV---D-VIGLDWTVDMADGRKRLGN--DISVQGNVDPACL 343 (411)
Q Consensus 271 ~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~---d-~l~~d~~~di~~~~~~~g~--~~~l~G~vd~~~L 343 (411)
-.+.+++.++.+++. +.|+++|+-+... .++.+.+.|. . ++|.. .-+...+++.+.. .+.+.|.+. .
T Consensus 110 q~~~f~~~l~~a~~~--~lpv~iH~~~a~~~~~~il~~~~~~~~~~v~H~~-~g~~~~~~~~~~~g~yi~~~g~~~---~ 183 (264)
T 1xwy_A 110 QERAFVAQLRIAADL--NMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCF-TGTREEMQACVAHGIYIGITGWVC---D 183 (264)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHGGGGGGSSCEEECSC-CCCHHHHHHHHHTTCEEEECGGGG---C
T ss_pred HHHHHHHHHHHHHHh--CCcEEEEcCCchHHHHHHHHhcCCCCCcEEEEcc-CCCHHHHHHHHHCCeEEEECcccc---C
Confidence 356777788888887 7999999865544 4577777652 2 34542 2356666655432 233333221 0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 344 FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 344 ~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+.+.+ .++++++..+..+++++|++..
T Consensus 184 ~~~~~----~l~~~~~~~~~drll~eTD~P~ 210 (264)
T 1xwy_A 184 ERRGL----ELRELLPLIPAEKLLIETDAPY 210 (264)
T ss_dssp TTTSH----HHHHHGGGSCGGGEEECCCTTS
T ss_pred CcCcH----HHHHHHHhCCHHHEEEecCCCC
Confidence 22233 3455666655579999999854
No 232
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=59.73 E-value=34 Score=30.35 Aligned_cols=133 Identities=11% Similarity=0.083 Sum_probs=68.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVI 313 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l 313 (411)
.+.++.+.++|+|.+.+.|..+. .-++ ...+++..++ .. ++|++ ..|... .++.+.+.|+|.+
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~~~~---------~~~~~i~~i~-~~-~ipvi--~~Ggi~~~~~~~~~~~~Gad~V 99 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAIENSG---------ENLPVLEKLS-EF-AEHIQ--IGGGIRSLDYAEKLRKLGYRRQ 99 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHHHCCC---------TTHHHHHHGG-GG-GGGEE--EESSCCSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCEEEEecccccccCCc---------hhHHHHHHHH-hc-CCcEE--EECCCCCHHHHHHHHHCCCCEE
Confidence 35666778899999998874331 0111 1122333333 22 56755 334433 3677888999999
Q ss_pred EcCC----CCC-HHHHHHHhCCCeeEEccCCcC---c-cCC-------CHHHHHHHHHHHHHHhCCCCeEEeCCC--CCC
Q 015201 314 GLDW----TVD-MADGRKRLGNDISVQGNVDPA---C-LFS-------PLPALTDEIQRVVKCAGSRGHILNLGH--GVL 375 (411)
Q Consensus 314 ~~d~----~~d-i~~~~~~~g~~~~l~G~vd~~---~-L~g-------t~eeV~~ev~~~i~~~~~~gfIls~gc--~i~ 375 (411)
.+.. ..+ +.++ +.+|+++.+ ++|.. . ..| +++|. ++++. ..+-+.++++.-. +..
T Consensus 100 ~lg~~~l~~p~~~~~~-~~~g~~i~~--~~d~~~~~v~~~g~~~~~~~~~~e~---~~~~~-~~G~~~i~~t~~~~~g~~ 172 (241)
T 1qo2_A 100 IVSSKVLEDPSFLKSL-REIDVEPVF--SLDTRGGRVAFKGWLAEEEIDPVSL---LKRLK-EYGLEEIVHTEIEKDGTL 172 (241)
T ss_dssp EECHHHHHCTTHHHHH-HTTTCEEEE--EEEEETTEECCTTCSSCSCCCHHHH---HHHHH-TTTCCEEEEEETTHHHHT
T ss_pred EECchHhhChHHHHHH-HHcCCcEEE--EEEecCCEEEECCceecCCCCHHHH---HHHHH-hCCCCEEEEEeecccccC
Confidence 7642 223 6677 778854333 34442 1 122 33333 23332 2333344443211 112
Q ss_pred CCCcHHHHHHHHHHH
Q 015201 376 VGTPEEAVAHFFEVG 390 (411)
Q Consensus 376 ~~tp~Eni~a~~~a~ 390 (411)
.+.+.+.++.+.+.+
T Consensus 173 ~g~~~~~i~~l~~~~ 187 (241)
T 1qo2_A 173 QEHDFSLTKKIAIEA 187 (241)
T ss_dssp CCCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHhc
Confidence 345678777777654
No 233
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=59.55 E-value=69 Score=28.49 Aligned_cols=98 Identities=9% Similarity=0.009 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC------Cc----cc-Hh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING------NG----GF-LE 303 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG------~~----~~-l~ 303 (411)
+.+.+.++...+.|++.+.+.-....-.+.+...+.+...++++.+.+++. |+.+.+|... .. .. .+
T Consensus 93 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~n~~~~~~~~~~~~~~~~~ 170 (269)
T 3ngf_A 93 DNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAPH--GITVLVEPLNTRNMPGYFIVHQLEAVG 170 (269)
T ss_dssp HHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEECCCCTTTSTTBSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEeeCCcccCccchhcCHHHHHH
Confidence 334455667778899988664332223556666678889999999999887 6888888622 11 11 23
Q ss_pred HHhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeE
Q 015201 304 RMKGTGVDV--IGLD------WTVDMADGRKRLGNDISV 334 (411)
Q Consensus 304 ~~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l 334 (411)
.+.+.+-+. +.+| ...|+.+..+++++++..
T Consensus 171 l~~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~ 209 (269)
T 3ngf_A 171 LVKRVNRPNVAVQLDLYHAQIMDGDLTRLIEKMNGAFSH 209 (269)
T ss_dssp HHHHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEE
T ss_pred HHHHhCCCCCCeEEEhhhHHhhCCCHHHHHHHhhhhEEE
Confidence 344454332 3333 235888888888887644
No 234
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=58.66 E-value=61 Score=31.26 Aligned_cols=101 Identities=9% Similarity=-0.032 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHH-HhCCCEEEEecCCC----CCC---------------CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEE
Q 015201 234 TQAIADYIIYQV-ESGAHCIQIFDSWG----GQL---------------PPHMWEQWSEPYIREIVSLVRTKCPETPIVL 293 (411)
Q Consensus 234 ~d~~~~~~~~~~-e~G~d~i~i~D~~~----~~i---------------Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~ 293 (411)
.+...+.++... ++|.|+|-+.-.-+ .|+ |.+.--+|. .++++.+++..|..++.+
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~----~eiv~aVr~avg~~~v~v 248 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLI----YDVTKSVCDAVGSDRVGL 248 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHH----HHHHHHHHHHHCGGGEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHH----HHHHHHHHHhcCCCeEEE
Confidence 344445566777 89999998764321 122 333333344 455555555432225665
Q ss_pred EecCC----------c----c-cHhHHhcCCCcEEEcCCC--------CCHHHHHHHhCCCeeEEccC
Q 015201 294 YINGN----------G----G-FLERMKGTGVDVIGLDWT--------VDMADGRKRLGNDISVQGNV 338 (411)
Q Consensus 294 H~CG~----------~----~-~l~~~~e~g~d~l~~d~~--------~di~~~~~~~g~~~~l~G~v 338 (411)
-+..+ . . +...+.+.|+|.+++... .++..+++.++..++..|++
T Consensus 249 Ris~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~~iPvi~~G~i 316 (379)
T 3aty_A 249 RISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRY 316 (379)
T ss_dssp EECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTCCSCEEEESSC
T ss_pred EECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHHCCCcEEEECCC
Confidence 43321 1 1 235566789999976431 12556677666555556665
No 235
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=58.48 E-value=32 Score=31.99 Aligned_cols=59 Identities=22% Similarity=0.323 Sum_probs=40.0
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
-++..+++|+|+|.+ |. +||++.++ +++.++. . +.+-..|+++ .+..+.++|+|.+++.
T Consensus 210 ea~eAl~aGaD~I~L-Dn----~~~~~l~~--------av~~~~~---~--v~ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 210 ELNQAIAAKADIVML-DN----FSGEDIDI--------AVSIARG---K--VALEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHTTCSEEEE-ES----CCHHHHHH--------HHHHHTT---T--CEEEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHcCCCEEEE-cC----CCHHHHHH--------HHHhhcC---C--ceEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 344556789999855 43 77765554 3444432 2 3455677765 5999999999999874
No 236
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=58.45 E-value=40 Score=29.15 Aligned_cols=121 Identities=11% Similarity=0.046 Sum_probs=63.2
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC--
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW-- 317 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~-- 317 (411)
.++.+.++|+|+|.+ +. .. .++++.+++. |.+++. .|.+..-+....+.|+|.+.+..
T Consensus 72 ~i~~a~~~Gad~V~~----~~-~~------------~~~~~~~~~~--g~~~~~-g~~t~~e~~~a~~~G~d~v~v~~t~ 131 (212)
T 2v82_A 72 QVDALARMGCQLIVT----PN-IH------------SEVIRRAVGY--GMTVCP-GCATATEAFTALEAGAQALKIFPSS 131 (212)
T ss_dssp HHHHHHHTTCCEEEC----SS-CC------------HHHHHHHHHT--TCEEEC-EECSHHHHHHHHHTTCSEEEETTHH
T ss_pred HHHHHHHcCCCEEEe----CC-CC------------HHHHHHHHHc--CCCEEe-ecCCHHHHHHHHHCCCCEEEEecCC
Confidence 456777899999852 22 22 2345666665 444332 24433333444578999987522
Q ss_pred CCCHHHH---HHHhC--CCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCC----CCcHHHHHHHHH
Q 015201 318 TVDMADG---RKRLG--NDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLV----GTPEEAVAHFFE 388 (411)
Q Consensus 318 ~~di~~~---~~~~g--~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~----~tp~Eni~a~~~ 388 (411)
..++..+ ++.++ -.+...|||++. .++++++. |-.++++++.- +.. .-|.+.++++.+
T Consensus 132 ~~g~~~~~~l~~~~~~~ipvia~GGI~~~-----------~i~~~~~~-Ga~gv~vGsai-~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 132 AFGPQYIKALKAVLPSDIAVFAVGGVTPE-----------NLAQWIDA-GCAGAGLGSDL-YRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp HHCHHHHHHHHTTSCTTCEEEEESSCCTT-----------THHHHHHH-TCSEEEECTTT-CCTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccCCCeEEEeCCCCHH-----------HHHHHHHc-CCCEEEEChHH-hCCCCCHHHHHHHHHHHHH
Confidence 1234444 34343 234556888642 22334443 43466666542 111 124566777777
Q ss_pred HHHhc
Q 015201 389 VGKSM 393 (411)
Q Consensus 389 a~~~y 393 (411)
.+++.
T Consensus 199 ~~~~~ 203 (212)
T 2v82_A 199 AYREA 203 (212)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 237
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=58.17 E-value=19 Score=33.23 Aligned_cols=64 Identities=11% Similarity=0.219 Sum_probs=37.7
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCCC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
+.++|+...-.+.+||-.+|..-.|. .+.++++.+.+.+ |+|+ ++.|+|.+..+++.++++|..
T Consensus 83 v~~ir~~~~~Pii~m~y~n~v~~~g~----~~f~~~~~~aG~d-Gviv-------~Dl~~ee~~~~~~~~~~~gl~ 146 (271)
T 1ujp_A 83 VREVRALTEKPLFLMTYLNPVLAWGP----ERFFGLFKQAGAT-GVIL-------PDLPPDEDPGLVRLAQEIGLE 146 (271)
T ss_dssp HHHHHHHCCSCEEEECCHHHHHHHCH----HHHHHHHHHHTCC-EEEC-------TTCCGGGCHHHHHHHHHHTCE
T ss_pred HHHHHhcCCCCEEEEecCcHHHHhhH----HHHHHHHHHcCCC-EEEe-------cCCCHHHHHHHHHHHHHcCCc
Confidence 45556554434566655554322354 4555566555433 5555 345557888888999998853
No 238
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=57.91 E-value=47 Score=32.38 Aligned_cols=84 Identities=14% Similarity=0.243 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH------H---HHHHHHHHHHHHHHHHhhCCCCCEEEEecCC
Q 015201 232 HLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM------W---EQWSEPYIREIVSLVRTKCPETPIVLYINGN 298 (411)
Q Consensus 232 ~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~------f---~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~ 298 (411)
.+.+...+.++...++|.|+|-+.-.-+ .|+||.. | -|-=.-+..++++.+++..|..|+.+-+...
T Consensus 168 ~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~ 247 (402)
T 2hsa_B 168 QVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPA 247 (402)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccc
Confidence 3344445556677889999998765322 1333321 0 0111233445566665544322676665432
Q ss_pred ---------c----c--cHhHHhcCC------CcEEEc
Q 015201 299 ---------G----G--FLERMKGTG------VDVIGL 315 (411)
Q Consensus 299 ---------~----~--~l~~~~e~g------~d~l~~ 315 (411)
. . +...+.+.| +|.+++
T Consensus 248 ~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v 285 (402)
T 2hsa_B 248 IDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHV 285 (402)
T ss_dssp CCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred cccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEE
Confidence 0 1 124556778 999876
No 239
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=57.78 E-value=1.7e+02 Score=29.82 Aligned_cols=146 Identities=16% Similarity=0.175 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-c---CCc------c
Q 015201 231 SHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-N---GNG------G 300 (411)
Q Consensus 231 ~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-C---G~~------~ 300 (411)
+.+.++..+.++.+++.|+|.+. .+.+. +...- +-++..+++...++|+++.. | |.. .
T Consensus 122 ~e~~~~~~~qi~~l~~~gvD~l~-~ET~~---~~~Ea--------~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~ 189 (566)
T 1q7z_A 122 EEFYENFRETVEIMVEEGVDGII-FETFS---DILEL--------KAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPA 189 (566)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEE-EEEEC---CHHHH--------HHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEE-EeccC---CHHHH--------HHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHH
Confidence 33455666677788899999974 44433 33332 33455666543367886644 3 321 1
Q ss_pred -cHhHHhcCCCcEEEcCCCCCHHH-------HHHHhCCCeeEEcc--CC----cCcc-CCCHHHHHHHHHHHHHHhCCCC
Q 015201 301 -FLERMKGTGVDVIGLDWTVDMAD-------GRKRLGNDISVQGN--VD----PACL-FSPLPALTDEIQRVVKCAGSRG 365 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d~~~di~~-------~~~~~g~~~~l~G~--vd----~~~L-~gt~eeV~~ev~~~i~~~~~~g 365 (411)
.+..+.+.|++++.+.-...+.. +++..+..+.+.-| .+ .... ..+|++..+.+++..+.+ -
T Consensus 190 ~~~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G---~ 266 (566)
T 1q7z_A 190 NFAITFDELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELG---V 266 (566)
T ss_dssp HHHHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTT---C
T ss_pred HHHHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcC---C
Confidence 23555667888886532233322 22222322434333 22 1112 268999999999988765 3
Q ss_pred eEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 366 HILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 366 fIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
-|++ ||. +|.|+.|+++.++++.+..
T Consensus 267 ~iiG-GCC---GTtP~hI~aia~~~~~~~p 292 (566)
T 1q7z_A 267 NIFG-GCC---GTTPEHVKLFRKVLGNRKP 292 (566)
T ss_dssp SEEC-CCT---TCCHHHHHHHHHHHCSCCC
T ss_pred cEEc-ccc---CCCHHHHHHHHHHhcCCCC
Confidence 3444 443 4779999999999987763
No 240
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=57.59 E-value=80 Score=30.13 Aligned_cols=124 Identities=10% Similarity=0.099 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+..+++++++.++|++.+-+. .+-.--||.-|+.+....++.+.+..++. |+|++- .-=+...++.+.++ +|.+-
T Consensus 120 e~a~~~a~~~k~aGa~~vr~q-~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~t-e~~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 120 EMLMETAHFLSELGVKVLRGG-AYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVT-EALGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEECB-SCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEE-ECSSGGGHHHHHHH-CSEEE
T ss_pred HHHHHHHHHHHHcCCCeeeee-EEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEE-EeCCHHHHHHHHHh-CCEEE
Confidence 344566778889999986332 11111122223222345566666677776 676442 22223357888888 89987
Q ss_pred cCC--CCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEe
Q 015201 315 LDW--TVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILN 369 (411)
Q Consensus 315 ~d~--~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls 369 (411)
+.. ..+..-+++. .|..+.+--| +.+|.+|+...+..+... |...++|.
T Consensus 195 IgAr~~~n~~LL~~va~~~kPVilk~G-----~~~tl~ei~~Ave~i~~~-GN~~viLc 247 (350)
T 1vr6_A 195 IGARNAQNFRLLSKAGSYNKPVLLKRG-----FMNTIEEFLLSAEYIANS-GNTKIILC 247 (350)
T ss_dssp ECGGGTTCHHHHHHHHTTCSCEEEECC-----TTCCHHHHHHHHHHHHHT-TCCCEEEE
T ss_pred ECcccccCHHHHHHHHccCCcEEEcCC-----CCCCHHHHHHHHHHHHHC-CCCeEEEE
Confidence 643 3355444443 2322222211 235899999888877654 44577885
No 241
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=57.57 E-value=90 Score=26.64 Aligned_cols=77 Identities=13% Similarity=0.101 Sum_probs=48.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW 317 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~ 317 (411)
.+.++.+.++|++.|.+.+.. .+++.+.+ ..+++.+..+.. +++++++ ..++...+.|+|.+++..
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~---~~~~~~~~----~~~~l~~~~~~~--~v~v~v~-----~~~~~a~~~gad~v~l~~ 94 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKN---APTREMYE----IGKTLRQLTREY--DALFFVD-----DRVDVALAVDADGVQLGP 94 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCS---CCHHHHHH----HHHHHHHHHHHT--TCEEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEECCCC---CCHHHHHH----HHHHHHHHHHHc--CCeEEEc-----ChHHHHHHcCCCEEEECC
Confidence 455677889999999876532 45544433 333444444433 5666663 357888889999998753
Q ss_pred -CCCHHHHHHHh
Q 015201 318 -TVDMADGRKRL 328 (411)
Q Consensus 318 -~~di~~~~~~~ 328 (411)
..+..++++..
T Consensus 95 ~~~~~~~~~~~~ 106 (215)
T 1xi3_A 95 EDMPIEVAKEIA 106 (215)
T ss_dssp TSCCHHHHHHHC
T ss_pred ccCCHHHHHHhC
Confidence 34666766654
No 242
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=57.43 E-value=42 Score=33.83 Aligned_cols=67 Identities=18% Similarity=0.170 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.+++++++|+|.+.+....+. + ....++++.+++..|+.+++.-.++.......+.+.|+|.+.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~--~---------~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH--S---------QGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT--S---------HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccc--h---------hhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 45677889999999977544321 1 1233456666666656777776666555567788899999854
No 243
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=57.38 E-value=56 Score=30.82 Aligned_cols=98 Identities=15% Similarity=0.117 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEecC-Cc-c-cHhHHhcCCCc---EE--EcCCCCCHHHHHHHh--CCCeeEEccCCcCc
Q 015201 273 PYIREIVSLVRTKCPETPIVLYING-NG-G-FLERMKGTGVD---VI--GLDWTVDMADGRKRL--GNDISVQGNVDPAC 342 (411)
Q Consensus 273 Py~k~i~~~i~~~~~g~~~~~H~CG-~~-~-~l~~~~e~g~d---~l--~~d~~~di~~~~~~~--g~~~~l~G~vd~~~ 342 (411)
..++.-++..++. |.|+++|+-. .. . .++.+.+.|++ ++ |++...|...+++.+ |-.+.|-|.+...
T Consensus 168 ~~f~aq~~~A~~~--glPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t~~- 244 (330)
T 3pnz_A 168 KTIRAVARAHHET--KAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIK- 244 (330)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTCTT-
T ss_pred HHHHHHHHHHHHH--CCeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcccC-
Confidence 3445556666666 7899999752 11 1 46778787765 22 444346787777765 4444444422110
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+.+.++-.+.++++++.+...++++++++.-
T Consensus 245 -~~~~~~~~~~l~~lv~~g~~drilleTD~p~ 275 (330)
T 3pnz_A 245 -YAPESARIAAILYLVSEGFEDQILVSGDTAR 275 (330)
T ss_dssp -TCCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred -CCChHHHHHHHHHHHHcCCCCeEEEeCCCCC
Confidence 1234445567777777654479999999864
No 244
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=57.30 E-value=56 Score=31.93 Aligned_cols=104 Identities=16% Similarity=0.143 Sum_probs=57.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCC----CCCCHH------HH---HHHHHHHHHHHHHHHHhhCCCCCEEEEecC------
Q 015201 237 IADYIIYQVESGAHCIQIFDSWG----GQLPPH------MW---EQWSEPYIREIVSLVRTKCPETPIVLYING------ 297 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~------~f---~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG------ 297 (411)
..+.++...++|.|+|-+.-.-+ .|+||. .| -|-=..+..++++.+++..|.-++.+-+..
T Consensus 170 ~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g 249 (407)
T 3tjl_A 170 YTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQN 249 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCC
Confidence 45556677899999998875432 134441 00 011123344555555544322256666553
Q ss_pred -----C----c---c-cHhHH---hcCC--CcEEEcCC-C-------------CCHHHHHHHhCCCeeEEccCCc
Q 015201 298 -----N----G---G-FLERM---KGTG--VDVIGLDW-T-------------VDMADGRKRLGNDISVQGNVDP 340 (411)
Q Consensus 298 -----~----~---~-~l~~~---~e~g--~d~l~~d~-~-------------~di~~~~~~~g~~~~l~G~vd~ 340 (411)
+ . . +++.+ .+.| ++.+++.. . ..+..+++.+...+...|++..
T Consensus 250 ~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~ 324 (407)
T 3tjl_A 250 MKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSY 324 (407)
T ss_dssp CCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCGGG
T ss_pred CcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCCCC
Confidence 1 0 1 23556 6778 89887631 0 2366788888765666677654
No 245
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=57.24 E-value=37 Score=30.64 Aligned_cols=123 Identities=8% Similarity=0.019 Sum_probs=66.8
Q ss_pred HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-cc-HhHHhcCCCcEE--EcCCC
Q 015201 243 YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-GF-LERMKGTGVDVI--GLDWT 318 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~~-l~~~~e~g~d~l--~~d~~ 318 (411)
.+.+.|+.+|-+.-+..+.. .+-.|.+.++++.+.++ |+|+.+|.-... .. .+.+.+.+..++ +....
T Consensus 100 ~~~~~g~~Gi~~~~~~~~~~------~~~~~~~~~~~~~a~~~--~lpv~iH~~~~~~~~~~~~~~~~pl~~vi~H~g~~ 171 (288)
T 2ffi_A 100 EMARLGVRGVRLNLMGQDMP------DLTGAQWRPLLERIGEQ--GWHVELHRQVADIPVLVRALQPYGLDIVIDHFGRP 171 (288)
T ss_dssp HHHTTTCCEEECCCSSSCCC------CTTSTTTHHHHHHHHHH--TCEEEECSCTTTHHHHHHHHTTTTCCEEESGGGSC
T ss_pred HHHHCCCeEEEEecccCCCC------CcccHHHHHHHHHHHHC--CCeEEEeechhhHHHHHHHHHHCCCCEEEECCCCC
Confidence 33456888886544332211 11235566677888887 789999875442 23 455666675544 23221
Q ss_pred C--------CHHHHHHHhCC-CeeEEccCCcCccC-C----CHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 319 V--------DMADGRKRLGN-DISVQGNVDPACLF-S----PLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 319 ~--------di~~~~~~~g~-~~~l~G~vd~~~L~-g----t~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
. ....+.+.... ++ .-.+...... . +.++....++++++..+..+++++|+....
T Consensus 172 ~~~~~~~~~~~~~~~~l~~~~n~--y~~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~ 240 (288)
T 2ffi_A 172 DARRGLGQPGFAELLTLSGRGKV--WVKVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHT 240 (288)
T ss_dssp CTTSCTTCTTHHHHTTCCCCSCE--EEEEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCT
T ss_pred CCCCCCCChhHHHHHHHHhCCCE--EEEeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCC
Confidence 1 13444443211 11 1111111111 1 124566778889998887899999997654
No 246
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=57.13 E-value=81 Score=27.30 Aligned_cols=90 Identities=19% Similarity=0.151 Sum_probs=50.6
Q ss_pred EEEEecCCcccHhHHhcCCCcEEEc----CC--------CCCHH---HHHHHhC-CCeeEEccCCcCccCCCHHHHHHHH
Q 015201 291 IVLYINGNGGFLERMKGTGVDVIGL----DW--------TVDMA---DGRKRLG-NDISVQGNVDPACLFSPLPALTDEI 354 (411)
Q Consensus 291 ~~~H~CG~~~~l~~~~e~g~d~l~~----d~--------~~di~---~~~~~~g-~~~~l~G~vd~~~L~gt~eeV~~ev 354 (411)
++-.+|.+..-+....+.|+|.+-+ +. ..++. ++++..+ -.+...|||++.. +
T Consensus 118 ~~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~n-----------v 186 (227)
T 2tps_A 118 ILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITIDN-----------A 186 (227)
T ss_dssp EEEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTTT-----------S
T ss_pred EEEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHHH-----------H
Confidence 4444555543344455679998863 21 12333 4444454 4577788887632 2
Q ss_pred HHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 355 QRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 355 ~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.++++ .+..|++++++---..+ |.+.++++++.++++
T Consensus 187 ~~~~~-~Ga~gv~vgs~i~~~~d-~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 187 APVIQ-AGADGVSMISAISQAED-PESAARKFREEIQTY 223 (227)
T ss_dssp HHHHH-TTCSEEEESHHHHTSSC-HHHHHHHHHHHHHHH
T ss_pred HHHHH-cCCCEEEEhHHhhcCCC-HHHHHHHHHHHHHhc
Confidence 33333 34457777765221222 448999999888765
No 247
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=56.60 E-value=75 Score=27.39 Aligned_cols=120 Identities=17% Similarity=0.125 Sum_probs=60.8
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEE---
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVI--- 313 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l--- 313 (411)
+++.+.++|+|+++++...... + .++.+.+++. |..+++ .+...+ .+..+.+ ++|.+
T Consensus 76 ~i~~~~~~gad~v~vh~~~~~~--~-----------~~~~~~~~~~--g~~i~~-~~~~~t~~e~~~~~~~-~~d~vl~~ 138 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTESTRH--I-----------HGALQKIKAA--GMKAGV-VINPGTPATALEPLLD-LVDQVLIM 138 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGCSC--H-----------HHHHHHHHHT--TSEEEE-EECTTSCGGGGGGGTT-TCSEEEEE
T ss_pred HHHHHHHcCCCEEEEccCcccc--H-----------HHHHHHHHHc--CCcEEE-EEcCCCCHHHHHHHHh-hCCEEEEE
Confidence 3467788999999887653321 2 1234455554 344333 332111 2333322 35655
Q ss_pred EcCC-----CCC------HHHHHHHh-----CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC
Q 015201 314 GLDW-----TVD------MADGRKRL-----GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVG 377 (411)
Q Consensus 314 ~~d~-----~~d------i~~~~~~~-----g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~ 377 (411)
+++. ..+ +.++++.. +-.+.+.|||++ +.++++++. +..+++++++=.=. .
T Consensus 139 ~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~~-----------~~~~~~~~~-Gad~vvvGsai~~~-~ 205 (220)
T 2fli_A 139 TVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDN-----------KTIRACYEA-GANVFVAGSYLFKA-S 205 (220)
T ss_dssp SSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCT-----------TTHHHHHHH-TCCEEEESHHHHTS-S
T ss_pred EECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECcCCH-----------HHHHHHHHc-CCCEEEEChHHhCC-C
Confidence 2221 112 45555554 223667899997 223333333 44577877652212 2
Q ss_pred CcHHHHHHHHHH
Q 015201 378 TPEEAVAHFFEV 389 (411)
Q Consensus 378 tp~Eni~a~~~a 389 (411)
-|.+.++++.+.
T Consensus 206 d~~~a~~~~~~~ 217 (220)
T 2fli_A 206 DLVSQVQTLRTA 217 (220)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 256677776654
No 248
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=56.58 E-value=89 Score=26.85 Aligned_cols=79 Identities=11% Similarity=0.038 Sum_probs=44.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
.+.++.+.+.|++.|.+.+.. +... ..++++.+. . +.++++=..+..+ .++...+.|+|.+++
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~-----~~~~-----~~i~~i~~~---~--~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNS-----PQWE-----QSIPAIVDA---Y--GDKALIGAGTVLKPEQVDALARMGCQLIVT 86 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTS-----TTHH-----HHHHHHHHH---H--TTTSEEEEECCCSHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCC-----hhHH-----HHHHHHHHh---C--CCCeEEEeccccCHHHHHHHHHcCCCEEEe
Confidence 455667788999999886543 2221 223333332 2 3455541111122 478888999999986
Q ss_pred CCC-CCHHHHHHHhCCC
Q 015201 316 DWT-VDMADGRKRLGND 331 (411)
Q Consensus 316 d~~-~di~~~~~~~g~~ 331 (411)
... .++.+.++.+|.+
T Consensus 87 ~~~~~~~~~~~~~~g~~ 103 (212)
T 2v82_A 87 PNIHSEVIRRAVGYGMT 103 (212)
T ss_dssp SSCCHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHcCCC
Confidence 542 2455566667743
No 249
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=55.98 E-value=1.7 Score=43.36 Aligned_cols=104 Identities=18% Similarity=0.221 Sum_probs=62.5
Q ss_pred HHHHHHHHhCCCEEEEecCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCCCE----EEEecCCc-----cc-H-hH
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQ---LPPHMWEQWSEPYIREIVSLVRTKCPETPI----VLYINGNG-----GF-L-ER 304 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~---iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~----~~H~CG~~-----~~-l-~~ 304 (411)
..++++..+|+|+|. .|-|=|+ -+| .+|-|-+|+++++.+++. |.++ -+|.||.. .+ | ..
T Consensus 38 ~~L~~LK~~GVdGVm-vDVWWGiVE~~~P---~~YdWsgY~~L~~mv~~~--GLKlq~vmSFHqCGgNVGD~~~IPLP~W 111 (498)
T 1fa2_A 38 DELKQVKAGGCDGVM-VDVWWGIIEAKGP---KQYDWSAYRELFQLVKKC--GLKIQAIMSFHQCGGNVGDAVFIPIPQW 111 (498)
T ss_dssp HHHHHHHHTTCCEEE-EEEEHHHHTCSBT---TBCCCHHHHHHHHHHHHT--TCEEEEEEECSCBCCCTTCCCCBCSCHH
T ss_pred HHHHHHHHcCCCEEE-EEeEeeeeccCCC---CccCcHHHHHHHHHHHHc--CCeEEEEEEeeecCCCCCCcccccCCHH
Confidence 445677889999984 4544332 234 567899999999999998 5543 56999652 22 4 44
Q ss_pred HhcCC---CcEEEcCCCCCHHHHHHHhCC--CeeEEccCCcC-ccC-CCHHHHHHHHHHHH
Q 015201 305 MKGTG---VDVIGLDWTVDMADGRKRLGN--DISVQGNVDPA-CLF-SPLPALTDEIQRVV 358 (411)
Q Consensus 305 ~~e~g---~d~l~~d~~~di~~~~~~~g~--~~~l~G~vd~~-~L~-gt~eeV~~ev~~~i 358 (411)
+.+.| .|++-.|.. |. +=+|.-++|.. +|. -||-++.++--+-.
T Consensus 112 V~~~~~~~pDi~ftDr~----------G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SF 162 (498)
T 1fa2_A 112 ILQIGDKNPDIFYTNRA----------GNRNQEYLSLGVDNQRLFQGRTALEMYRDFMESF 162 (498)
T ss_dssp HHHHTTTCGGGEEECTT----------CCEEEEEECGGGTTCEEETTEEHHHHHHHHHHHH
T ss_pred HHHhhccCCCceEECCC----------CCccccccccccccccccCCCCHHHHHHHHHHHH
Confidence 55533 355544431 21 23555556654 344 46666665554444
No 250
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=55.96 E-value=1.8 Score=43.21 Aligned_cols=105 Identities=13% Similarity=0.236 Sum_probs=63.8
Q ss_pred HHHHHHHHhCCCEEEEecCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCCCE----EEEecCCc-----cc-H-hH
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQ---LPPHMWEQWSEPYIREIVSLVRTKCPETPI----VLYINGNG-----GF-L-ER 304 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~---iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~----~~H~CG~~-----~~-l-~~ 304 (411)
..++++..+|+|+|. .|-|=|+ -+| .+|-|-+|+++++.+++. |.++ -+|.||.. .+ | ..
T Consensus 37 ~~L~~LK~~GVdGVm-vDVWWGiVE~~~P---~~YdWsgY~~l~~mv~~~--GLKlq~vmSFHqCGgNVGD~~~IPLP~W 110 (495)
T 1wdp_A 37 EQLLQLRAAGVDGVM-VDVWWGIIELKGP---KQYDWRAYRSLLQLVQEC--GLTLQAIMSFHQCGGNVGDIVNIPIPQW 110 (495)
T ss_dssp HHHHHHHHTTCCEEE-EEEEHHHHTCSST---TCCCCHHHHHHHHHHHHT--TCEEEEEEECSCBCCSTTCSCCBCSCHH
T ss_pred HHHHHHHHcCCCEEE-EEeEeeeeccCCC---CccCcHHHHHHHHHHHHc--CCeEEEEEEeeecCCCCCCcccccCCHH
Confidence 445677889999984 4544332 335 567899999999999998 5543 56999752 22 4 33
Q ss_pred Hhc---CCCcEEEcCCCCCHHHHHHHhCC--CeeEEccCCcC-ccC-CCHHHHHHHHHHHHH
Q 015201 305 MKG---TGVDVIGLDWTVDMADGRKRLGN--DISVQGNVDPA-CLF-SPLPALTDEIQRVVK 359 (411)
Q Consensus 305 ~~e---~g~d~l~~d~~~di~~~~~~~g~--~~~l~G~vd~~-~L~-gt~eeV~~ev~~~i~ 359 (411)
+.+ ...|++-.|.. |. +=+|.-++|.. +|. -||-++.++--+-.+
T Consensus 111 V~~~~~~~pDi~ftDr~----------G~rn~EyLSlg~D~~pvl~GRTpiq~Y~Dfm~SFr 162 (495)
T 1wdp_A 111 VLDIGESNHDIFYTNRS----------GTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFR 162 (495)
T ss_dssp HHHHHHHCGGGEEECTT----------CCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHHH
T ss_pred HHHhhccCCCcEEECCC----------CCccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 444 33455544432 21 24565557765 344 477776665554443
No 251
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=55.76 E-value=78 Score=30.07 Aligned_cols=83 Identities=13% Similarity=0.167 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHH-HHHhhCCCCCEEEEecC---C-cc--cHhHH-
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVS-LVRTKCPETPIVLYING---N-GG--FLERM- 305 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~-~i~~~~~g~~~~~H~CG---~-~~--~l~~~- 305 (411)
+-.++.++...++|+|++.+.-++-.- .|. +=+.-|++.|.+ .. ++|++++..- . .. .+..+
T Consensus 105 ~eai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~IA~aa~-----~lPiilYn~P~tg~~l~~e~~~~L~ 175 (344)
T 2hmc_A 105 ASAVAHAVHAQKVGAKGLMVIPRVLSRGSVI----AAQKAHFKAILSAAP-----EIPAVIYNSPYYGFATRADLFFALR 175 (344)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSSSTTCH----HHHHHHHHHHHHHST-----TSCEEEEEBGGGTBCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEECCCccCCCCCH----HHHHHHHHHHHhhCC-----CCcEEEEecCccCCCcCHHHHHHHH
Confidence 344566777778899999876664333 343 556677888877 33 5788877754 1 11 23344
Q ss_pred hcCCCcEEEc-CCCC--CHHHHHHH
Q 015201 306 KGTGVDVIGL-DWTV--DMADGRKR 327 (411)
Q Consensus 306 ~e~g~d~l~~-d~~~--di~~~~~~ 327 (411)
.+.+ +++.+ +... |+....+.
T Consensus 176 a~~p-nIvGiKdssgp~d~~~~~~~ 199 (344)
T 2hmc_A 176 AEHK-NLVGFKEFGGPADMRYAAEN 199 (344)
T ss_dssp HHCT-TEEEEEECSCHHHHHHHHHH
T ss_pred hcCC-CEEEEEcCCCCCCHHHHHHH
Confidence 4443 55555 4444 66666554
No 252
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=55.24 E-value=1.9 Score=43.38 Aligned_cols=105 Identities=14% Similarity=0.198 Sum_probs=63.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCC---CCHHHHHHHHHHHHHHHHHHHHhhCCCCCE----EEEecCCc-----cc-H-h
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQ---LPPHMWEQWSEPYIREIVSLVRTKCPETPI----VLYINGNG-----GF-L-E 303 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~---iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~----~~H~CG~~-----~~-l-~ 303 (411)
...++++..+|+|+|. .|-|=|+ -+| .+|-|-+|+++++.+++. |.++ -+|.||.. .+ | .
T Consensus 34 ~a~L~~LK~~GVdGVm-vDVWWGiVE~~~P---~~YdWsgY~~L~~mvr~~--GLKlq~vmSFHqCGgNVGD~~~IPLP~ 107 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVM-VDVWWGLVEGKGP---KAYDWSAYKQLFELVQKA--GLKLQAIMSFHQCGGNVGDAVNIPIPQ 107 (535)
T ss_dssp HHHHHHHHHTTCCEEE-EEEEHHHHTCSST---TCCCCHHHHHHHHHHHHT--TCEEEEEEECSCBCCSTTCSCCBCSCH
T ss_pred HHHHHHHHHcCCCEEE-EEeEeeeeccCCC---CccCcHHHHHHHHHHHHc--CCeEEEEEEeeecCCCCCCcccccCCH
Confidence 3445677889999984 4544332 345 567899999999999998 5543 56999752 22 4 3
Q ss_pred HHhc---CCCcEEEcCCCCCHHHHHHHhCC--CeeEEccCCcC-ccC-CCHHHHHHHHHHHH
Q 015201 304 RMKG---TGVDVIGLDWTVDMADGRKRLGN--DISVQGNVDPA-CLF-SPLPALTDEIQRVV 358 (411)
Q Consensus 304 ~~~e---~g~d~l~~d~~~di~~~~~~~g~--~~~l~G~vd~~-~L~-gt~eeV~~ev~~~i 358 (411)
.+.+ ...|++-.|.. |. +=+|.-++|.. +|. -||-+++++--+-.
T Consensus 108 WV~e~~~~~pDi~ftDr~----------G~rn~EyLSlg~D~~pvl~GRTpiq~Y~DFM~SF 159 (535)
T 2xfr_A 108 WVRDVGTRDPDIFYTDGH----------GTRNIEYLTLGVDNQPLFHGRSAVQMYADYMTSF 159 (535)
T ss_dssp HHHHHHHHCGGGEEECTT----------CCEEEEEECGGGTTCCCBTTBCHHHHHHHHHHHH
T ss_pred HHHHhhhcCCCceEEcCC----------CCccccccccccccccccCCCCHHHHHHHHHHHH
Confidence 3444 33455544431 21 23555557765 344 47766665544433
No 253
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=55.14 E-value=14 Score=32.81 Aligned_cols=134 Identities=19% Similarity=0.143 Sum_probs=70.4
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~ 315 (411)
+.++.+.++|+|.+.+.+.-+.+-.. +.. ++++.+++.. ++|++.| |.+. .++.+.+.|+|.+.+
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~~--------~~~-~~i~~i~~~~-~ipv~v~--ggi~~~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGRG--------SNH-ELLAEVVGKL-DVQVELS--GGIRDDESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTSC--------CCH-HHHHHHHHHC-SSEEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccCC--------ChH-HHHHHHHHhc-CCcEEEE--CCCCCHHHHHHHHHcCCCEEEE
Confidence 45567788999999987632221110 111 3333444443 5787665 4332 478888899999987
Q ss_pred CCC--CC---HHHHHHHhCCCeeEEccCCcC------cc--CC----CHHHHHHHHHHHHHHhCCCCeEEeCCC--CCCC
Q 015201 316 DWT--VD---MADGRKRLGNDISVQGNVDPA------CL--FS----PLPALTDEIQRVVKCAGSRGHILNLGH--GVLV 376 (411)
Q Consensus 316 d~~--~d---i~~~~~~~g~~~~l~G~vd~~------~L--~g----t~eeV~~ev~~~i~~~~~~gfIls~gc--~i~~ 376 (411)
... .+ +.++.+.+|.++.+ ++|+. .+ .| +. +..+.++++.+. +-+.+++++-. +...
T Consensus 103 g~~~l~~p~~~~~~~~~~g~~~~~--~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~~-G~~~i~~~~~~~~~~~~ 178 (244)
T 2y88_A 103 GTAALENPQWCARVIGEHGDQVAV--GLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDSE-GCSRFVVTDITKDGTLG 178 (244)
T ss_dssp CHHHHHCHHHHHHHHHHHGGGEEE--EEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHHT-TCCCEEEEETTTTTTTS
T ss_pred CchHhhChHHHHHHHHHcCCCEEE--EEeccccCCCCEEEECCccCCCC-CHHHHHHHHHhC-CCCEEEEEecCCccccC
Confidence 542 12 56667778755443 34432 11 22 11 334444555443 33455554422 1223
Q ss_pred CCcHHHHHHHHH
Q 015201 377 GTPEEAVAHFFE 388 (411)
Q Consensus 377 ~tp~Eni~a~~~ 388 (411)
+..++.++.+.+
T Consensus 179 g~~~~~~~~l~~ 190 (244)
T 2y88_A 179 GPNLDLLAGVAD 190 (244)
T ss_dssp CCCHHHHHHHHT
T ss_pred CCCHHHHHHHHH
Confidence 455666666543
No 254
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=55.06 E-value=1.3e+02 Score=28.07 Aligned_cols=65 Identities=22% Similarity=0.330 Sum_probs=39.0
Q ss_pred HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 243 YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
...+.|+..|.+.. | -.|..+. -.+++.++++.+++.. ++.+. -+.|... .++.+++.|++.+++
T Consensus 102 ~~~~~G~~~i~l~g---G-e~p~~~~--~~~~~~~l~~~ik~~~-~i~i~-~s~g~~~~e~l~~L~~aG~~~i~i 168 (350)
T 3t7v_A 102 TLKGAGFHMVDLTM---G-EDPYYYE--DPNRFVELVQIVKEEL-GLPIM-ISPGLMDNATLLKAREKGANFLAL 168 (350)
T ss_dssp HHTTSCCSEEEEEE---C-CCHHHHH--STHHHHHHHHHHHHHH-CSCEE-EECSSCCHHHHHHHHHTTEEEEEC
T ss_pred HHHHCCCCEEEEee---C-CCCcccc--CHHHHHHHHHHHHhhc-CceEE-EeCCCCCHHHHHHHHHcCCCEEEE
Confidence 33457888886632 2 1343220 1355677888887653 44432 2445544 478999999998865
No 255
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=54.75 E-value=40 Score=29.47 Aligned_cols=122 Identities=9% Similarity=0.062 Sum_probs=65.2
Q ss_pred HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCcc-cHhHHhcCCCcEEEc-----
Q 015201 243 YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNGG-FLERMKGTGVDVIGL----- 315 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~~-~l~~~~e~g~d~l~~----- 315 (411)
.+.++|+|.+.++-..+ +++ .+++++.+++. |.+..+-.. +-+. ..+.+.+.|.+-+-+
T Consensus 75 ~~~~~Gad~itvh~~~g----~~~--------l~~~~~~~~~~--g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~ 140 (216)
T 1q6o_A 75 MCFEANADWVTVICCAD----INT--------AKGALDVAKEF--NGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRD 140 (216)
T ss_dssp HHHHTTCSEEEEETTSC----HHH--------HHHHHHHHHHT--TCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHH
T ss_pred HHHhCCCCEEEEeccCC----HHH--------HHHHHHHHHHc--CCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHH
Confidence 56789999987754333 332 33556677776 455433233 3212 455666666543321
Q ss_pred --CCC-----CCHHHHHHHhCCC--eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC-CCCcHHHHHH
Q 015201 316 --DWT-----VDMADGRKRLGND--ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL-VGTPEEAVAH 385 (411)
Q Consensus 316 --d~~-----~di~~~~~~~g~~--~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~-~~tp~Eni~a 385 (411)
+.. ..+..+++.++.+ +.+.|||.+.. ++++++. |...++++++ +- ..-|.+.+++
T Consensus 141 ~~~~G~~g~~~~i~~lr~~~~~~~~i~v~GGI~~~~-----------~~~~~~a-Gad~ivvG~~--I~~a~dp~~~~~~ 206 (216)
T 1q6o_A 141 AQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALED-----------LPLFKGI-PIHVFIAGRS--IRDAASPVEAARQ 206 (216)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCCGGG-----------GGGGTTS-CCSEEEESHH--HHTSSCHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHhcCCCCcEEEECCcChhh-----------HHHHHHc-CCCEEEEeeh--hcCCCCHHHHHHH
Confidence 122 1345566666533 57789998753 1333332 2234555433 32 2236688888
Q ss_pred HHHHHHh
Q 015201 386 FFEVGKS 392 (411)
Q Consensus 386 ~~~a~~~ 392 (411)
+.+..++
T Consensus 207 ~~~~i~~ 213 (216)
T 1q6o_A 207 FKRSIAE 213 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877665
No 256
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=54.43 E-value=31 Score=31.64 Aligned_cols=124 Identities=10% Similarity=0.034 Sum_probs=67.5
Q ss_pred HHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-c-cHhHHhcCCCcEE--EcCC
Q 015201 242 IYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-G-FLERMKGTGVDVI--GLDW 317 (411)
Q Consensus 242 ~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~-~l~~~~e~g~d~l--~~d~ 317 (411)
+.+.+.|+.+|-+ +....- .+ ++-.|.+.++++.+.+. |.|+++|+-... . ..+.+.+.++.++ ++..
T Consensus 112 ~~l~~~gv~Gi~l-~~~~~~-~~----~~~~~~~~~~~~~a~~~--glpv~iH~~~~~l~~~~~~l~~~p~~~Vi~H~g~ 183 (294)
T 4i6k_A 112 VNLKAQGIVGVRL-NLFGLN-LP----ALNTPDWQKFLRNVESL--NWQVELHAPPKYLVQLLPQLNEYSFDVVIDHFGR 183 (294)
T ss_dssp HHHHTTTEEEEEE-ECTTSC-CC----CSSSHHHHHHHHHHHHT--TCEEEEECCHHHHHHHHHHHTTSSSCEEESGGGC
T ss_pred HHHHHCCCcEEEe-ccCCCC-CC----CcccHHHHHHHHHHHHc--CCEEEEeeCcchHHHHHHHHHHCCCCEEEECCCC
Confidence 3444558777754 222210 01 11225667778888887 799999986543 2 2355666776554 3332
Q ss_pred CC--------CHHHHHHHhCC-CeeEEccCCcCccC---C-CHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 318 TV--------DMADGRKRLGN-DISVQGNVDPACLF---S-PLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 318 ~~--------di~~~~~~~g~-~~~l~G~vd~~~L~---g-t~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
.. ....+.+.... ++-+ .+.-.... + +.......++++++..+..+++++|++-..
T Consensus 184 p~~~~g~~~~~~~~~~~l~~~~nv~~--k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~ 252 (294)
T 4i6k_A 184 VDPVKGIEDPDYQKFLSLLNVKQHWI--KVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHT 252 (294)
T ss_dssp CCTTTCTTCHHHHHHHHHCCTTTEEE--ECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCT
T ss_pred CCCCCCCCCHHHHHHHHHHhCCCEEE--EecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCC
Confidence 11 13344443221 2222 12111111 1 224556788899999988899999997654
No 257
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=54.16 E-value=67 Score=28.41 Aligned_cols=93 Identities=12% Similarity=0.189 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC--cE-EEcCCCCCHHHHHHHh--CCCeeEEccCCcCccC
Q 015201 271 SEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV--DV-IGLDWTVDMADGRKRL--GNDISVQGNVDPACLF 344 (411)
Q Consensus 271 ~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~--d~-l~~d~~~di~~~~~~~--g~~~~l~G~vd~~~L~ 344 (411)
-.+.+++.++.+++. ++|+++|+-.... .++.+.+.|. .+ +|. +..+...+++.+ |-.+.+.|.+ .+
T Consensus 112 q~~~f~~~~~~a~~~--~~Pv~iH~~~a~~~~~~il~~~~~~~~~i~H~-~~g~~~~~~~~~~~g~~i~~~g~~----~~ 184 (259)
T 1zzm_A 112 QQWLLDEQLKLAKRY--DLPVILHSRRTHDKLAMHLKRHDLPRTGVVHG-FSGSLQQAERFVQLGYKIGVGGTI----TY 184 (259)
T ss_dssp HHHHHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHCCTTCEEETT-CCSCHHHHHHHHHTTCEEEECGGG----GC
T ss_pred HHHHHHHHHHHHHHh--CCcEEEEecccHHHHHHHHHhcCCCCCEEEEc-CCCCHHHHHHHHHCCCEEEECcee----ec
Confidence 356777778888887 7999999865544 4577777654 33 343 223555555544 3223332222 22
Q ss_pred CCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 345 SPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
...++ ++++++.....+++++|++..
T Consensus 185 ~~~~~----~~~~~~~~~~dril~eTD~P~ 210 (259)
T 1zzm_A 185 PRASK----TRDVIAKLPLASLLLETDAPD 210 (259)
T ss_dssp TTTCS----HHHHHHHSCGGGEEECCCBTS
T ss_pred cccHH----HHHHHHhCCHHHEEEecCCCC
Confidence 22233 445555555579999999853
No 258
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=53.88 E-value=42 Score=31.35 Aligned_cols=67 Identities=22% Similarity=0.211 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE-ecC-Ccc--cHhHHhcCC
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY-ING-NGG--FLERMKGTG 309 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H-~CG-~~~--~l~~~~e~g 309 (411)
.+-.++.++++.++|||+|++.- .-+++++++| .+.++ +|+... .++ ... ..+.+.++|
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~----~~~~ee~~~~--------~~~~~-----~Pl~~n~~~~g~tp~~~~~eL~~lG 232 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEA----MKTLDDYRRF--------KEAVK-----VPILANLTEFGSTPLFTLDELKGAN 232 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC----CCSHHHHHHH--------HHHHC-----SCBEEECCTTSSSCCCCHHHHHHTT
T ss_pred HHHHHHHHHhhHhcCCCEEEeCC----CCCHHHHHHH--------HHHcC-----CCeEEEeccCCCCCCCCHHHHHHcC
Confidence 35566778899999999997632 3477777665 44442 465432 343 333 368999999
Q ss_pred CcEEEcCC
Q 015201 310 VDVIGLDW 317 (411)
Q Consensus 310 ~d~l~~d~ 317 (411)
+..+++..
T Consensus 233 v~~v~~~~ 240 (298)
T 3eoo_A 233 VDIALYCC 240 (298)
T ss_dssp CCEEEECS
T ss_pred CeEEEEch
Confidence 99988754
No 259
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=53.31 E-value=1e+02 Score=26.86 Aligned_cols=98 Identities=9% Similarity=-0.005 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC------Cc-c---cH-
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG-GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING------NG-G---FL- 302 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG------~~-~---~l- 302 (411)
+.+.+.++...+.|++.+.+.-... .-.+.+...+.+...++++.+.++++ |+.+.+|.+. .. . .+
T Consensus 85 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~~E~~~~~~~~~~~~~~~~~~~ 162 (260)
T 1k77_A 85 ADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPH--GKRILVEALSPGVKPHYLFSSQYQAL 162 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEECCCCTTTSTTBSCCSHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEeCCccCCCcCccCCHHHHH
Confidence 4455566677788999886642221 23466777788899999999999887 7888998873 21 1 12
Q ss_pred hHHhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeE
Q 015201 303 ERMKGTGVDV--IGLD------WTVDMADGRKRLGNDISV 334 (411)
Q Consensus 303 ~~~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l 334 (411)
+.+.+.|-+. +.+| ...|+.+.-+++++++..
T Consensus 163 ~l~~~~~~~~~g~~~D~~h~~~~~~d~~~~l~~~~~~i~~ 202 (260)
T 1k77_A 163 AIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAH 202 (260)
T ss_dssp HHHHHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEE
T ss_pred HHHHHhCCCCEEEEeeHHHHHhhCCCHHHHHHHhhhheeE
Confidence 3333444332 2333 245788877788876543
No 260
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=52.99 E-value=47 Score=31.11 Aligned_cols=100 Identities=10% Similarity=0.023 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHhhCCCCCEEEEec--CCcc--cHhHHhcCCCc----E-EEcCCCCCHHHHHHHh--CCCeeEEc-cCCc
Q 015201 273 PYIREIVSLVRTKCPETPIVLYIN--GNGG--FLERMKGTGVD----V-IGLDWTVDMADGRKRL--GNDISVQG-NVDP 340 (411)
Q Consensus 273 Py~k~i~~~i~~~~~g~~~~~H~C--G~~~--~l~~~~e~g~d----~-l~~d~~~di~~~~~~~--g~~~~l~G-~vd~ 340 (411)
..+++.++..++. |+|+++|+. |... .++.+.+.|++ + .|.....|...+++.. |-.+.+-+ |+-.
T Consensus 148 ~~f~~q~~lA~~~--glPv~iH~~~~~r~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~t 225 (330)
T 2ob3_A 148 LVLKAAARASLAT--GVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSA 225 (330)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCGGGTHHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCC
T ss_pred HHHHHHHHHHHHh--CCeEEEECCCCCCCHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCcccc
Confidence 3455566677776 789999983 3322 35667777764 2 3554334677766643 54444441 2211
Q ss_pred Ccc-----------CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 341 ACL-----------FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 341 ~~L-----------~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
... ..+.+.-.+.++++++......+++++++..
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~ 270 (330)
T 2ob3_A 226 IGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTF 270 (330)
T ss_dssp TTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 100 0233344456777777654478999999864
No 261
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=52.43 E-value=1.1e+02 Score=27.41 Aligned_cols=97 Identities=14% Similarity=0.158 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC---cE-EEcCCCCCHHHHHHHhCCCeeEEccCCcCcc
Q 015201 269 QWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV---DV-IGLDWTVDMADGRKRLGNDISVQGNVDPACL 343 (411)
Q Consensus 269 ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~---d~-l~~d~~~di~~~~~~~g~~~~l~G~vd~~~L 343 (411)
+.-.+.+.++++.+.+. |.|+++|+-.... .++.+.+.+. .+ ++. ...+...+++.+...+-+ +++....
T Consensus 116 ~~q~~~f~~~~~~a~~~--~lPv~iH~~~~~~~~~~il~~~p~~~~~~I~H~-~~g~~~~~~~~~~~g~y~--~~sg~~~ 190 (268)
T 1j6o_A 116 EVQKRVFVEQIELAGKL--NLPLVVHIRDAYSEAYEILRTESLPEKRGVIHA-FSSDYEWAKKFIDLGFLL--GIGGPVT 190 (268)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHSCCCSSCEEETT-CCSCHHHHHHHHHHTEEE--EECGGGG
T ss_pred HHHHHHHHHHHHHHHHh--CCCEEEEeCchHHHHHHHHHhcCCCCCCEEEEc-CCCCHHHHHHHHHCCCeE--Eeccccc
Confidence 44567788888888887 7999999765444 4677777762 33 333 223455555443212211 1222111
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 344 FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 344 ~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+..++ .++++++..+..++++++++..
T Consensus 191 ~~~~~----~l~~~i~~~~~driL~eTD~P~ 217 (268)
T 1j6o_A 191 YPKNE----ALREVVKRVGLEYIVLETDCPF 217 (268)
T ss_dssp CTTCH----HHHHHHHHHCGGGEEECCCBTS
T ss_pred ccchH----HHHHHHHhCChhhEEEecCCCC
Confidence 22233 3566777776679999999754
No 262
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=52.16 E-value=1.1e+02 Score=27.48 Aligned_cols=140 Identities=12% Similarity=0.091 Sum_probs=80.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE--ecCCC----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe
Q 015201 222 APHVLRTLLSHLTQAIADYIIYQVESGAHCIQI--FDSWG----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI 295 (411)
Q Consensus 222 ~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i--~D~~~----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~ 295 (411)
+|+...+.+ +.+.+.++...+.|++.+.+ ...++ +-.+.+...+.+...++++.+.++++ |+.+.+|.
T Consensus 79 d~~~r~~~~----~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lEn 152 (294)
T 3vni_A 79 DPDIRKNAK----AFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEAC--GVDFCLEV 152 (294)
T ss_dssp CHHHHHHHH----HHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEC
T ss_pred CHHHHHHHH----HHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEe
Confidence 455444443 44455566777789998853 23332 13566777788999999999999987 78889998
Q ss_pred cCC----c----cc-HhHHhcCCCcE--EEcCC------CCCHHHHHHHhCCCeeEEccCCcC--cc-CCCHHHHHHHHH
Q 015201 296 NGN----G----GF-LERMKGTGVDV--IGLDW------TVDMADGRKRLGNDISVQGNVDPA--CL-FSPLPALTDEIQ 355 (411)
Q Consensus 296 CG~----~----~~-l~~~~e~g~d~--l~~d~------~~di~~~~~~~g~~~~l~G~vd~~--~L-~gt~eeV~~ev~ 355 (411)
.+. . .. .+.+.+.+-+. +.+|. ..|+.+.-+++++++..+=-=|.. .. .|..+ -+++.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~r~~pG~G~id--~~~~~ 230 (294)
T 3vni_A 153 LNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEEDSIGGAIRTAGSYLGHLHTGECNRKVPGRGRIP--WVEIG 230 (294)
T ss_dssp CCTTTCSSCCSHHHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTSCCTTSSSCC--HHHHH
T ss_pred cCcccCcccCCHHHHHHHHHHcCCCCEEEEEEhhhhHHcCCCHHHHHHHhhhhEeEEEeCCCCCCCCCCCCcC--HHHHH
Confidence 742 1 11 23344444332 33331 358888777788765442111221 12 23322 24555
Q ss_pred HHHHHhCC-CCeEEe
Q 015201 356 RVVKCAGS-RGHILN 369 (411)
Q Consensus 356 ~~i~~~~~-~gfIls 369 (411)
+.++..+- |-+++-
T Consensus 231 ~~L~~~gy~g~~~lE 245 (294)
T 3vni_A 231 EALADIGYNGSVVME 245 (294)
T ss_dssp HHHHHTTCCSCEEEC
T ss_pred HHHHHhCCCCcEEEE
Confidence 66666553 555554
No 263
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=52.06 E-value=60 Score=31.30 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-h--HHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-E--RMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~--~~~e~g~ 310 (411)
++..+.++.+.++ ++.|.+.|..|. +.|..+.+++.- +.+.+ ++++++-+|.+.+... + . .-.+.|+
T Consensus 145 ~~~~~~~~~~~~~-a~~i~l~DT~G~-~~P~~~~~lv~~----l~~~~---~~~~~i~~H~Hnd~GlAvAN~laAv~aGa 215 (382)
T 2ztj_A 145 QDLLAVYEAVAPY-VDRVGLADTVGV-ATPRQVYALVRE----VRRVV---GPRVDIEFHGHNDTGCAIANAYEAIEAGA 215 (382)
T ss_dssp HHHHHHHHHHGGG-CSEEEEEETTSC-CCHHHHHHHHHH----HHHHH---TTTSEEEEEEBCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHh-cCEEEecCCCCC-CCHHHHHHHHHH----HHHhc---CCCCeEEEEeCCCccHHHHHHHHHHHhCC
Confidence 3445556667788 999989887665 778887776532 22221 0257889999877652 2 2 2346799
Q ss_pred cEEE
Q 015201 311 DVIG 314 (411)
Q Consensus 311 d~l~ 314 (411)
+.+.
T Consensus 216 ~~vd 219 (382)
T 2ztj_A 216 THVD 219 (382)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9985
No 264
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=51.93 E-value=96 Score=27.69 Aligned_cols=79 Identities=11% Similarity=0.054 Sum_probs=40.8
Q ss_pred cCCCcEEEcCCCCCHHHHHHHhCCC-eeEEccCCcCccCCCHHHHHH--HHHHHHHHhCCCCeEEeCCCCCCC-CCcHHH
Q 015201 307 GTGVDVIGLDWTVDMADGRKRLGND-ISVQGNVDPACLFSPLPALTD--EIQRVVKCAGSRGHILNLGHGVLV-GTPEEA 382 (411)
Q Consensus 307 e~g~d~l~~d~~~di~~~~~~~g~~-~~l~G~vd~~~L~gt~eeV~~--ev~~~i~~~~~~gfIls~gc~i~~-~tp~En 382 (411)
+.|.+++-... .++..+++.++.. +.+-|||.++. ++..+.++ ..+++++.+.+ .+|.+. .|-. .-|.+.
T Consensus 154 ~~G~~g~V~~~-~ei~~lr~~~~~~~i~V~gGI~~~g--~~~~dq~rv~t~~~a~~aGad-~iVvGr--~I~~a~dp~~a 227 (246)
T 2yyu_A 154 ESGLDGVVCSA-NEAAFIKERCGASFLAVTPGIRFAD--DAAHDQVRVVTPRKARALGSD-YIVIGR--SLTRAADPLRT 227 (246)
T ss_dssp HHTCCEEECCH-HHHHHHHHHHCTTSEEEECCCCCCC---------CCCCHHHHHHHTCS-EEEECH--HHHTSSSHHHH
T ss_pred HhCCCEEEeCH-HHHHHHHHhcCCCCEEEeCCcCCCC--CCcccccccCCHHHHHHcCCC-EEEECH--hhcCCCCHHHH
Confidence 35666653332 2477888888744 68889999862 22222222 34444544433 444433 2321 226677
Q ss_pred HHHHHHHHH
Q 015201 383 VAHFFEVGK 391 (411)
Q Consensus 383 i~a~~~a~~ 391 (411)
++++.+..+
T Consensus 228 ~~~l~~~i~ 236 (246)
T 2yyu_A 228 YARLQHEWN 236 (246)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHH
Confidence 887776554
No 265
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=51.91 E-value=48 Score=31.12 Aligned_cols=67 Identities=15% Similarity=0.221 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE-ec-CCcc-c-HhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY-IN-GNGG-F-LERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H-~C-G~~~-~-l~~~~e~g~ 310 (411)
+-.++.++++.++|||+|++. +.-|++++++| .+.+. ++|+.+- .. |... + .+.+.++|+
T Consensus 178 deAi~Ra~ay~eAGAD~ifi~----~~~~~~~~~~i--------~~~~~----~~Pv~~n~~~~g~~p~~t~~eL~~lGv 241 (307)
T 3lye_A 178 EECIERLRAARDEGADVGLLE----GFRSKEQAAAA--------VAALA----PWPLLLNSVENGHSPLITVEEAKAMGF 241 (307)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----CCSCHHHHHHH--------HHHHT----TSCBEEEEETTSSSCCCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEec----CCCCHHHHHHH--------HHHcc----CCceeEEeecCCCCCCCCHHHHHHcCC
Confidence 445677889999999999763 34678777664 44443 3566432 34 3343 2 688999999
Q ss_pred cEEEcCC
Q 015201 311 DVIGLDW 317 (411)
Q Consensus 311 d~l~~d~ 317 (411)
..+.+..
T Consensus 242 ~~v~~~~ 248 (307)
T 3lye_A 242 RIMIFSF 248 (307)
T ss_dssp SEEEEET
T ss_pred eEEEECh
Confidence 9887643
No 266
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=51.91 E-value=41 Score=32.03 Aligned_cols=129 Identities=16% Similarity=0.103 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHhCCceeEEEecccHHHHHH-HHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHH--------------
Q 015201 171 FVGDSLKILRKEVGEHAAVLGFVGAPWTIAT-YIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQ-------------- 235 (411)
Q Consensus 171 ~~~eaik~l~~~~~~~~~v~~~~~gPft~a~-~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d-------------- 235 (411)
...++++++.+ .|-+. |-..+++|.+... .-.|+ .+..+|+.+.++++.+.+
T Consensus 71 ~~~~aA~~a~~-~G~D~-IeIn~gcP~~~~~~d~~G~-----------~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~ 137 (350)
T 3b0p_A 71 SLAEAARIGEA-FGYDE-INLNLGCPSEKAQEGGYGA-----------CLLLDLARVREILKAMGEAVRVPVTVKMRLGL 137 (350)
T ss_dssp HHHHHHHHHHH-TTCSE-EEEEECCCSHHHHHTTCGG-----------GGGGCHHHHHHHHHHHHHHCSSCEEEEEESCB
T ss_pred HHHHHHHHHHH-cCCCE-EEECCcCCCCcCcCCCcch-----------hHHhCHHHHHHHHHHHHHHhCCceEEEEecCc
Confidence 44566666654 33222 2334456765432 21221 345788888888887765
Q ss_pred -------HHHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhH
Q 015201 236 -------AIADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLER 304 (411)
Q Consensus 236 -------~~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~ 304 (411)
...++++.+.++|+|.|.+..-... .+++...+. ..|+.-.++..+++..+++|++ ..|.+. ....
T Consensus 138 ~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~-~~~~~~~~i~~ik~~~~~iPVi--anGgI~s~eda~~ 214 (350)
T 3b0p_A 138 EGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANRE-IPPLRHDWVHRLKGDFPQLTFV--TNGGIRSLEEALF 214 (350)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEE--EESSCCSHHHHHH
T ss_pred CccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccC-CCcccHHHHHHHHHhCCCCeEE--EECCcCCHHHHHH
Confidence 3467778888999999988764332 244432111 1112223344444443356654 556653 3555
Q ss_pred HhcCCCcEEEcC
Q 015201 305 MKGTGVDVIGLD 316 (411)
Q Consensus 305 ~~e~g~d~l~~d 316 (411)
+.+ |+|.+.+.
T Consensus 215 ~l~-GaD~V~iG 225 (350)
T 3b0p_A 215 HLK-RVDGVMLG 225 (350)
T ss_dssp HHT-TSSEEEEC
T ss_pred HHh-CCCEEEEC
Confidence 556 99998764
No 267
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=51.55 E-value=74 Score=30.44 Aligned_cols=66 Identities=15% Similarity=0.156 Sum_probs=42.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.++++|+|.|.+.-..+ .++ ...+.++.+++.. +.|++...+........+.+.|+|.+.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G---~~~--------~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHG---HSL--------NIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC---SBH--------HHHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCC---CcH--------HHHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 4678888999999886532222 121 2233455555544 5677765555444567788999999965
No 268
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=51.25 E-value=38 Score=30.55 Aligned_cols=40 Identities=25% Similarity=0.382 Sum_probs=22.1
Q ss_pred HHHHHHHHhhCCCCCE-EEEecCCcc---c---HhHHhcCCCcEEEcC
Q 015201 276 REIVSLVRTKCPETPI-VLYINGNGG---F---LERMKGTGVDVIGLD 316 (411)
Q Consensus 276 k~i~~~i~~~~~g~~~-~~H~CG~~~---~---l~~~~e~g~d~l~~d 316 (411)
++.+..+++.+ ...+ .+-.||+.. . ++.+.+.|+|.+.++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg 52 (262)
T 1rd5_A 6 SDTMAALMAKG-KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELG 52 (262)
T ss_dssp HHHHHHHHHTT-CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHhcC-CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 44455555542 2222 344577752 2 355667799998774
No 269
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=50.62 E-value=1.9e+02 Score=28.42 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=24.8
Q ss_pred HHHHHhCCCCeEEeCCCCC--CCCCcHHHHHHHHHHHHhcC
Q 015201 356 RVVKCAGSRGHILNLGHGV--LVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 356 ~~i~~~~~~gfIls~gc~i--~~~tp~Eni~a~~~a~~~yg 394 (411)
.+++.+| .-.||..|.++ -|+-+-...+|+.+++.-.-
T Consensus 377 ~l~~~~G-~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA~~ 416 (444)
T 3kdn_A 377 PVIEALG-TDIVLQLGGGTLGHPDGPAAGARAVRQAIDAIM 416 (444)
T ss_dssp HHHHHHC-SSSEEECSHHHHTCTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHhC-CcEEEEcCCcccCCCCChhHHHHHHHHHHHHHH
Confidence 4556666 36788877666 25556777888876665543
No 270
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=50.53 E-value=22 Score=34.64 Aligned_cols=68 Identities=19% Similarity=0.273 Sum_probs=45.4
Q ss_pred HHHhCCCEEEEecCCCC---------CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEec-C-----Cc------c-
Q 015201 244 QVESGAHCIQIFDSWGG---------QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYIN-G-----NG------G- 300 (411)
Q Consensus 244 ~~e~G~d~i~i~D~~~~---------~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~C-G-----~~------~- 300 (411)
+.++|.+.|.+-|.|.+ ..+|+.| |- +|.+++.+|++ |.++.+|.. | .. .
T Consensus 40 l~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kF-----P~Gl~~l~~~i~~~--Glk~Giw~~pg~~tc~~~pg~~~~~~ 112 (397)
T 3a5v_A 40 LKDLGYNYVIIDDCWQKNERESSKTLLADPTKF-----PRGIKPLVDDIHNL--GLKAGIYSSAGTLTCGGHIASLGYED 112 (397)
T ss_dssp HHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTC-----TTCHHHHHHHHHHT--TCEEEEEEESSSBCTTSCBCCTTCHH
T ss_pred CcccCceEEEECCCcCCCCCCCCCCeEEChhcC-----CcCHHHHHHHHHHc--CCEEEEEecCCCCccCCCHHHHHHHH
Confidence 34589999877665642 3344333 66 89999999998 677766654 2 11 1
Q ss_pred -cHhHHhcCCCcEEEcCCC
Q 015201 301 -FLERMKGTGVDVIGLDWT 318 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d~~ 318 (411)
....+.+.|+|.+=+|.+
T Consensus 113 ~~~~~~~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 113 IDAKTWAKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHHTCCEEEEECT
T ss_pred HHHHHHHHcCCCEEEECCC
Confidence 235678899999977653
No 271
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=50.49 E-value=1e+02 Score=28.52 Aligned_cols=140 Identities=12% Similarity=0.062 Sum_probs=77.0
Q ss_pred HHHHHHHHHHhCCCEEEEe--cCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc----c-cHhHHhcC
Q 015201 237 IADYIIYQVESGAHCIQIF--DSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG----G-FLERMKGT 308 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~--D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~----~-~l~~~~e~ 308 (411)
+++-+....++||-.+.++ |+-+. -.+|+.|+|+ ++.+++.+++. ++..+.|.. . .+..+ +.
T Consensus 36 ia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~--------~~~IR~~~pd~-ii~~TTgg~~~~~eeR~~~~-~~ 105 (284)
T 3chv_A 36 QVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARL--------TEGLHTHCPGM-IVQFSTGGRSGAGQARGGML-PL 105 (284)
T ss_dssp HHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHH--------HHHHHHHSTTC-EEEECCCTTTCCGGGGGTTG-GG
T ss_pred HHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHH--------HHHHHHhCCCe-EEEeCCCCCCCCHHHHHHhh-hc
Confidence 3444556789999999877 43343 5789888774 66777776675 344444432 1 23223 34
Q ss_pred CCcEEEcCCC----------CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC---C--CCeEEeCCCC
Q 015201 309 GVDVIGLDWT----------VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG---S--RGHILNLGHG 373 (411)
Q Consensus 309 g~d~l~~d~~----------~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~---~--~gfIls~gc~ 373 (411)
..|..+++.. .+...+.+.+. .+---|+-|..-..+...++. ++++++.+- + --|+|+...+
T Consensus 106 ~Pe~aSl~~Gs~Nf~~~v~~n~~~~~~~~~~--~~~e~Gv~pE~e~fd~g~l~~-~~~l~~~Gll~~p~~~~~vlGv~~g 182 (284)
T 3chv_A 106 KPDMASLSVGSNNFPSRVYENPPDLVDWLAA--QMRSYRVTPEIEAFDLSHILR-AIDMHGRGLLYGKLYVQFVMGVKNA 182 (284)
T ss_dssp CCSEEEECCSCEECSSSEECCCHHHHHHHHH--HHHHHTCEEEEEESSHHHHHH-HHHHHHTTCSCSSCEEEEEECCTTS
T ss_pred CCCEEEecCcccccCCccccCCHHHHHHHHH--HHHHcCCEEEEEEECHHHHHH-HHHHHHcCCCCCCceEEEEEecCCC
Confidence 4455544321 22333333221 111234445432245666655 466776653 2 2466664444
Q ss_pred CCCCCcHHHHHHHHHHHH
Q 015201 374 VLVGTPEEAVAHFFEVGK 391 (411)
Q Consensus 374 i~~~tp~Eni~a~~~a~~ 391 (411)
.| ..++++.+|++.+-
T Consensus 183 ~~--~~~~~L~~~~~~~p 198 (284)
T 3chv_A 183 MP--ADREVFDFYVRMMR 198 (284)
T ss_dssp CC--CCHHHHHHHHHHHH
T ss_pred CC--CCHHHHHHHHHhcc
Confidence 44 55899999998864
No 272
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=49.59 E-value=67 Score=29.18 Aligned_cols=150 Identities=14% Similarity=0.177 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEe----cCCCC--CCCHHHHHHHHH-HHHHHHHHHHHhhCCCCCEEEEecCC-------cc
Q 015201 235 QAIADYIIYQVESGAHCIQIF----DSWGG--QLPPHMWEQWSE-PYIREIVSLVRTKCPETPIVLYINGN-------GG 300 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~----D~~~~--~iSp~~f~ef~~-Py~k~i~~~i~~~~~g~~~~~H~CG~-------~~ 300 (411)
+...+.++.+.++|+|.|-++ ||.+. .|-...-|-+-. =-.+++++.+++....+|+++-.--| ..
T Consensus 28 ~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~ 107 (252)
T 3tha_A 28 QTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEK 107 (252)
T ss_dssp HHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHH
Confidence 345567778889999998766 55542 222222221111 01234444444432236877654433 22
Q ss_pred cHhHHhcCCCcEEEc-C----CCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCC-CC
Q 015201 301 FLERMKGTGVDVIGL-D----WTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGH-GV 374 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~-d----~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc-~i 374 (411)
+++..++.|+|++-+ | +..++.+..+++|=+.++. +.| -|++ +..+++.+. ..|||..... ++
T Consensus 108 F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~l--vaP----~t~~---eRi~~ia~~--a~gFiY~Vs~~Gv 176 (252)
T 3tha_A 108 FVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITL--VSV----TTPK---ERVKKLVKH--AKGFIYLLASIGI 176 (252)
T ss_dssp HHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEE--EET----TSCH---HHHHHHHTT--CCSCEEEECCSCS
T ss_pred HHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEE--eCC----CCcH---HHHHHHHHh--CCCeEEEEecCCC
Confidence 457778899999854 2 2223444555555222111 112 2322 222333332 2477655442 22
Q ss_pred CC-C-CcHHHHHHHHHHHHhcCC
Q 015201 375 LV-G-TPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 375 ~~-~-tp~Eni~a~~~a~~~yg~ 395 (411)
.. . ...+++..+++.+|++..
T Consensus 177 TG~~~~~~~~~~~~v~~vr~~~~ 199 (252)
T 3tha_A 177 TGTKSVEEAILQDKVKEIRSFTN 199 (252)
T ss_dssp SSCSHHHHHHHHHHHHHHHTTCC
T ss_pred CCcccCCCHHHHHHHHHHHHhcC
Confidence 21 1 124568888888888753
No 273
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=49.41 E-value=36 Score=30.36 Aligned_cols=82 Identities=18% Similarity=0.283 Sum_probs=49.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVI 313 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l 313 (411)
.++++.+.++|++.+.+.|-.+. .-.+ +..++++.+++.. ++|++. .|.+. .++.+.+.|+|.+
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~---------~~~~~i~~i~~~~-~ipvi~--~Ggi~~~~~~~~~l~~Gad~V 105 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSG---------YDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLRGADKV 105 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSC---------CCHHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCc---------ccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCee
Confidence 35677788899999998874332 1111 1123344555443 678653 45443 3677778999999
Q ss_pred EcCC----CCC-HHHHHHHhCCC
Q 015201 314 GLDW----TVD-MADGRKRLGND 331 (411)
Q Consensus 314 ~~d~----~~d-i~~~~~~~g~~ 331 (411)
.+.. ..+ +.++.+.+|.+
T Consensus 106 ~ig~~~l~dp~~~~~~~~~~g~~ 128 (247)
T 3tdn_A 106 SINTAAVENPSLITQIAQTFGSQ 128 (247)
T ss_dssp CCSHHHHHCTHHHHHHHHHHC--
T ss_pred ehhhHHhhChHHHHHHHHHhCCC
Confidence 7643 122 66788888854
No 274
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=49.09 E-value=1.8e+02 Score=27.48 Aligned_cols=129 Identities=12% Similarity=0.079 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHh
Q 015201 225 VLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLE 303 (411)
Q Consensus 225 ~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~ 303 (411)
.+.+++...+..+..+++...+.+++.++++.-..+. .. ...+++++++.+++..++ |+.++.+.... ...
T Consensus 142 ~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~-~~------~~~~~~~Li~~vR~~~~g-~VTya~~~~~~~~~~ 213 (343)
T 3civ_A 142 SWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTA-EP------HEAMWRETIARVRTEYDG-LVTYNCNHGREEHVR 213 (343)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTT-TT------CHHHHHHHHHHHHHHCCS-EEEEEEETTCTTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCC-Cc------hHHHHHHHHHHHHhhCCC-CEEEEecCccccccc
Confidence 3445566677766666655556689999888644432 11 244667778899988876 78777654321 222
Q ss_pred HHhcCCCcEEEcCCCCC----------HHHHHHHhCCCeeEE--ccCCcCcc-----------CCCHHHHHHHHHHHHHH
Q 015201 304 RMKGTGVDVIGLDWTVD----------MADGRKRLGNDISVQ--GNVDPACL-----------FSPLPALTDEIQRVVKC 360 (411)
Q Consensus 304 ~~~e~g~d~l~~d~~~d----------i~~~~~~~g~~~~l~--G~vd~~~L-----------~gt~eeV~~ev~~~i~~ 360 (411)
.+ + -+|+++++.... +..+.+++++.+.|. |--...-. ..|++.=.+..+..++.
T Consensus 214 lw-~-~~DvIgin~Y~~~~~w~~~~~~l~~~~~~~~KPIiitE~G~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~~ 291 (343)
T 3civ_A 214 FW-D-AVDLISSSAYYPIDRWRDRVPVLREVAEAHEKPLFFMEVGCPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFAA 291 (343)
T ss_dssp CG-G-GSSEEEEECCCCGGGHHHHHHHHHHHHHHHTCCEEEEEECCCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHHH
T ss_pred cc-c-cCCEEEEeccCCchhHHHHHHHHHHHHHHhCCCEEEEeeCCCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHH
Confidence 12 2 478887764322 445556778777662 32111111 13566666777777777
Q ss_pred hCC
Q 015201 361 AGS 363 (411)
Q Consensus 361 ~~~ 363 (411)
+..
T Consensus 292 ~~~ 294 (343)
T 3civ_A 292 MPD 294 (343)
T ss_dssp SCC
T ss_pred Hhc
Confidence 654
No 275
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=48.98 E-value=44 Score=33.48 Aligned_cols=67 Identities=13% Similarity=0.197 Sum_probs=42.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.+++++++|+|.|.+. ...+. + +...++++.+++..|++|++.-.+........+.+.|+|.+.+
T Consensus 231 ~~~a~~l~~aG~d~I~id-~a~g~-~---------~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVD-TAHGH-S---------KGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEE-CSCCS-B---------HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcccceEEec-ccCCc-c---------hhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 456778889999998664 32221 2 2334556666666556777663333333467788999999975
No 276
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=48.97 E-value=1.7e+02 Score=27.20 Aligned_cols=132 Identities=16% Similarity=0.109 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhc--CCCc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKG--TGVD 311 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e--~g~d 311 (411)
+..++.++.|++.|||.|-+.-.. ..++++.=-+.+.|.++.+-+.. ++|+.+-+ ... .++.-.+ .|.+
T Consensus 37 ~~a~~~A~~~v~~GAdiIDIg~g~-~~v~~~eem~rvv~~i~~~~~~~-----~vpisIDT--~~~~V~eaaL~~~~Ga~ 108 (300)
T 3k13_A 37 DEALSIARQQVEDGALVIDVNMDD-GLLDARTEMTTFLNLIMSEPEIA-----RVPVMIDS--SKWEVIEAGLKCLQGKS 108 (300)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC-TTSCHHHHHHHHHHHHHTCHHHH-----TSCEEEEC--SCHHHHHHHHHHCSSCC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCC-CCCCHHHHHHHHHHHHHHhhhcC-----CCeEEEeC--CCHHHHHHHHHhcCCCC
Confidence 556677889999999999776532 35666544444555555433322 57765433 322 4555555 5999
Q ss_pred EEE-cCCCC------CHHHHHHHhCCCeeEEccCCcCccCCCHHH---HHHHHHHHH-HHhC-C-CCeEEeCCCC-CC
Q 015201 312 VIG-LDWTV------DMADGRKRLGNDISVQGNVDPACLFSPLPA---LTDEIQRVV-KCAG-S-RGHILNLGHG-VL 375 (411)
Q Consensus 312 ~l~-~d~~~------di~~~~~~~g~~~~l~G~vd~~~L~gt~ee---V~~ev~~~i-~~~~-~-~gfIls~gc~-i~ 375 (411)
+++ +.... .+..+.+++|-.+++|- .|..-.-.|.++ +.+.+.+++ ...| + ...|+-||-+ +.
T Consensus 109 iINdIs~~~~d~~~~~~~~l~a~~ga~vV~mh-~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~g 185 (300)
T 3k13_A 109 IVNSISLKEGEEVFLEHARIIKQYGAATVVMA-FDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVA 185 (300)
T ss_dssp EEEEECSTTCHHHHHHHHHHHHHHTCEEEEES-EETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCS
T ss_pred EEEeCCcccCChhHHHHHHHHHHhCCeEEEEe-eCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccC
Confidence 885 43221 35566777887666653 222111123443 344444443 3344 3 6899999975 44
No 277
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=48.96 E-value=1.5e+02 Score=27.22 Aligned_cols=144 Identities=10% Similarity=0.071 Sum_probs=77.6
Q ss_pred HHHHHHHHHHhCCCEEEEe--cCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cH---hHHhcCC
Q 015201 237 IADYIIYQVESGAHCIQIF--DSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FL---ERMKGTG 309 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~--D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l---~~~~e~g 309 (411)
+++-+....++||..+.++ |+-+. -.+|+.|+| +++.+++.+|+. ++..+-|... .. ..+.+..
T Consensus 32 ia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e--------~~~~IR~~~pd~-ii~~Ttg~~~~~~e~R~~~~~~~ 102 (275)
T 3no5_A 32 QVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFAL--------VLEGIRKHAPGM-ITQVSTGGRSGAGNERGAMLSLR 102 (275)
T ss_dssp HHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHH--------HHHHHHHHSTTC-EEEECCCCCTTCCGGGGTTGGGC
T ss_pred HHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHH--------HHHHHHHhCCCe-EEEeCCCCCCCCHHHHhhHhhcC
Confidence 3445567789999998877 44443 578988877 467777776665 4444544321 11 1122334
Q ss_pred CcEEEcCCC----------CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC-CC----CeEEeCCCCC
Q 015201 310 VDVIGLDWT----------VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG-SR----GHILNLGHGV 374 (411)
Q Consensus 310 ~d~l~~d~~----------~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~-~~----gfIls~gc~i 374 (411)
.+..+++-. ++...+.+.+. .+---|+-|..-..+...++. ++++++.+- ++ -|+|+...+.
T Consensus 103 Pe~aSl~~gs~Nf~~~v~~N~~~~~~~~~~--~~~e~Gi~pE~e~fd~g~l~~-~~~l~~~Gl~~~p~~~~~vlGv~~g~ 179 (275)
T 3no5_A 103 PDMASLATGSVNFPTRVYDNPPELVDWLAA--EMKTYGIKPEVEAFDLSMIFQ-AAAMQAAGAIVGPLHIQFVMGIKNAM 179 (275)
T ss_dssp CSEEEEECSCEECSSSEECCCHHHHHHHHH--HHHHTTCEEEEEESSTHHHHH-HHHHHHHTSSCSSCEEEEEECCTTSC
T ss_pred CCEEEecCcccccccccccCCHHHHHHHHH--HHHHcCCeeEEEEEcHHHHHH-HHHHHHCCCCCCCeeEEEEeCCCCCC
Confidence 455443211 12333333221 111233445432235555654 455666643 22 3555544455
Q ss_pred CCCCcHHHHHHHHHHHHhcC
Q 015201 375 LVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 375 ~~~tp~Eni~a~~~a~~~yg 394 (411)
| ..++++.+|++..++++
T Consensus 180 ~--~~~~~l~~~~~~l~~~~ 197 (275)
T 3no5_A 180 P--VDREVLEFYVQTLKRLS 197 (275)
T ss_dssp C--CCHHHHHHHHHHHHHHC
T ss_pred C--CCHHHHHHHHHHHHhCC
Confidence 5 55899999999886654
No 278
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=48.13 E-value=65 Score=28.83 Aligned_cols=90 Identities=12% Similarity=0.149 Sum_probs=50.2
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCC-EEEEec-CCc--ccH----------hH
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETP-IVLYIN-GNG--GFL----------ER 304 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~-~~~H~C-G~~--~~l----------~~ 304 (411)
.|++.+.++|+|.+.++--.+ +++ ++++++.+++.+...+ ++-... -.. ..+ +.
T Consensus 83 ~~i~~~~~~Gad~vTvH~~~g----~~~--------l~~~~~~~~~~G~~~~~~l~v~~~ts~~~~~l~~~~~~~~~~d~ 150 (245)
T 1eix_A 83 HAVAAAADLGVWMVNVHASGG----ARM--------MTAAREALVPFGKDAPLLIAVTVLTSMEASDLVDLGMTLSPADY 150 (245)
T ss_dssp HHHHHHHHHTCSEEEEBGGGC----HHH--------HHHHHHTTGGGGGGCCEEEEECSCTTCCHHHHHTTTCCSCHHHH
T ss_pred HHHHHHHhCCCCEEEEeccCC----HHH--------HHHHHHHHHHcCCCCCcEEEEEecCCCCHHHHHHhccCCCHHHH
Confidence 356677789999997654322 332 3355667766531023 221221 111 011 11
Q ss_pred ---H----hcCCCcEEEcCCCCCHHHHHHHhCC-CeeEEccCCcC
Q 015201 305 ---M----KGTGVDVIGLDWTVDMADGRKRLGN-DISVQGNVDPA 341 (411)
Q Consensus 305 ---~----~e~g~d~l~~d~~~di~~~~~~~g~-~~~l~G~vd~~ 341 (411)
+ .+.|.+++-... .++.++++.+++ .+.+-|||.++
T Consensus 151 Vl~ma~~~~~~G~~g~V~~~-~ei~~lr~~~~~~~i~v~gGI~~~ 194 (245)
T 1eix_A 151 AERLAALTQKCGLDGVVCSA-QEAVRFKQVFGQEFKLVTPGIRPQ 194 (245)
T ss_dssp HHHHHHHHHHTTCSEEECCG-GGHHHHHHHHCSSSEEEECCBCCT
T ss_pred HHHHHHHHHHcCCCeEEeCH-HHHHHHHHhcCCCCEEEECCcCCC
Confidence 1 246777764443 358889998874 46889999986
No 279
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=48.09 E-value=1.1e+02 Score=26.55 Aligned_cols=88 Identities=17% Similarity=0.126 Sum_probs=52.1
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc--
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL-- 315 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~-- 315 (411)
+++.+.++|+|++.+.+... + ...+++++.++++ |....+..-|-.+ .+..+.+.|+|.+.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~~----~--------~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH----I--------ATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHR 140 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC----H--------HHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHhcCCCEEEEecCCC----H--------HHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceeeee
Confidence 55778899999997765432 1 1245667778877 5555542333222 355666779996532
Q ss_pred C-------CCC---CHHHHHHHhC--CCeeEEccCCcC
Q 015201 316 D-------WTV---DMADGRKRLG--NDISVQGNVDPA 341 (411)
Q Consensus 316 d-------~~~---di~~~~~~~g--~~~~l~G~vd~~ 341 (411)
. ... .+..+++..+ -.+++-|||++.
T Consensus 141 ~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~~~ 178 (218)
T 3jr2_A 141 SRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVPE 178 (218)
T ss_dssp CHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCCGG
T ss_pred ccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCCHH
Confidence 1 111 2455666543 236778999875
No 280
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=47.58 E-value=39 Score=30.94 Aligned_cols=96 Identities=14% Similarity=0.118 Sum_probs=59.5
Q ss_pred cCCcc-cHhHHhcCCCcEEEc-CC---------CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCC
Q 015201 296 NGNGG-FLERMKGTGVDVIGL-DW---------TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSR 364 (411)
Q Consensus 296 CG~~~-~l~~~~e~g~d~l~~-d~---------~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~ 364 (411)
+.+.. .+..+.+.|++..-+ .. .-.+.++.+.+++++.-.++|+|. ++++..++.++ +...+=.
T Consensus 46 ~~~~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~v~p~----~~~~a~~eL~~-~~~~g~~ 120 (291)
T 3irs_A 46 EKSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAA----TRKEAMAQMQE-ILDLGIR 120 (291)
T ss_dssp HTCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCS----SHHHHHHHHHH-HHHTTCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEecCcc----CHHHHHHHHHH-HHhCCCe
Confidence 34444 467777788876421 11 112556677888888878889985 34556667777 6555435
Q ss_pred CeEEeCCCC-CCCCCcHHHHHHHHHHHHhcCCC
Q 015201 365 GHILNLGHG-VLVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 365 gfIls~gc~-i~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
|+-+.++.. .+.....+.+..+++.+.++|..
T Consensus 121 Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glp 153 (291)
T 3irs_A 121 IVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIP 153 (291)
T ss_dssp CEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCC
T ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCe
Confidence 666665431 12223346789999999999743
No 281
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=47.44 E-value=35 Score=32.55 Aligned_cols=70 Identities=11% Similarity=0.071 Sum_probs=49.3
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++.+.++++..-++.||+. .+++..+|++++++..|=.|+-+.+.-+ ......+.+..+.+++.++|.
T Consensus 118 l~~~~~~~P~Rf~g~a~v~~~----~~~~a~~El~r~~~~~G~~Gv~l~~~~~-~~~~~d~~~~p~~~~~~e~g~ 187 (357)
T 3nur_A 118 LANYIAQYPNRFVGFATLPIN----EPEAAAREFERCINDLGFKGALIMGRAQ-DGFLDQDKYDIIFKTAENLDV 187 (357)
T ss_dssp HHHHHHHSTTTEEECBCCCTT----SHHHHHHHHHHHHHTTCCCCEEEESCBT-TBCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHHhCCCEEEEEEeCCCC----CHHHHHHHHHHHHhhcCceEEEeCCCCC-CCCCCCccHHHHHHHHHhcCC
Confidence 455667788888888888873 5777888999999876656777764321 112234568889999999874
No 282
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=47.36 E-value=42 Score=33.71 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
+.+++++++|+|.|.+.-.. + -+ +...++++.+++..|++|++.-.+........+.+.|+|.+.+
T Consensus 234 ~~a~~l~~aG~d~I~id~a~-g-~~---------~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSH-G-HS---------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSC-T-TS---------HHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhccCceEEecccc-c-cc---------hHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEE
Confidence 45778889999998664332 2 11 2233556666666667787763333333467788899999975
No 283
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=46.93 E-value=76 Score=29.16 Aligned_cols=65 Identities=11% Similarity=0.115 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCCcEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGVDVI 313 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~d~l 313 (411)
+-.++-++++.++|||.|++ + +.-+++..++ +.+.+ .+|+.+ .|+... ..+.+.++|+..+
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~-e---~~~~~~~~~~--------i~~~~-----~~P~n~-~~~~~~~~~~eL~~lGv~~v 229 (275)
T 2ze3_A 168 AETVRRGQAYADAGADGIFV-P---LALQSQDIRA--------LADAL-----RVPLNV-MAFPGSPVPRALLDAGAARV 229 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEC-T---TCCCHHHHHH--------HHHHC-----SSCEEE-ECCTTSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEE-C---CCCCHHHHHH--------HHHhc-----CCCEEE-ecCCCCCCHHHHHHcCCcEE
Confidence 45567788999999999854 2 2345666654 34444 357643 476433 4789999999998
Q ss_pred EcCC
Q 015201 314 GLDW 317 (411)
Q Consensus 314 ~~d~ 317 (411)
++..
T Consensus 230 ~~~~ 233 (275)
T 2ze3_A 230 SFGQ 233 (275)
T ss_dssp ECTT
T ss_pred EECh
Confidence 8754
No 284
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=46.83 E-value=1.4e+02 Score=25.64 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=64.8
Q ss_pred CCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc--c--cHhHHhcCCCcEEEc--CCCCC
Q 015201 248 GAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG--G--FLERMKGTGVDVIGL--DWTVD 320 (411)
Q Consensus 248 G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~--~--~l~~~~e~g~d~l~~--d~~~d 320 (411)
+...|.+.. |. ++.|+ ++.++++.+++. |..+.+.+.|.. . .++.+.+. ++.+++ +.. +
T Consensus 69 ~~~~i~~~G--GEP~l~~~--------~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~-~ 134 (245)
T 3c8f_A 69 SGGGVTASG--GEAILQAE--------FVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQM-N 134 (245)
T ss_dssp TTCEEEEEE--SCGGGGHH--------HHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCS-S
T ss_pred CCCeEEEEC--CCcCCCHH--------HHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCC-C
Confidence 457776655 32 45543 356777888876 567888888854 3 46667776 776654 432 3
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC--CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS--RGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~--~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
-. ..+++. | . +.+++.+.++.+.+..-+ -.+++.+|. +-..+.+..+++.+++.|
T Consensus 135 ~~-~~~~~~------~-~-------~~~~~~~~i~~l~~~g~~v~i~~~~~~g~----~~~~~~~~~~~~~~~~~~ 191 (245)
T 3c8f_A 135 DE-IHQNLV------G-V-------SNHRTLEFAKYLANKNVKVWIRYVVVPGW----SDDDDSAHRLGEFTRDMG 191 (245)
T ss_dssp HH-HHHHHH------S-S-------CSHHHHHHHHHHHHHTCCEEEEEEECTTT----TCCHHHHHHHHHHHHHHC
T ss_pred HH-Hhhhcc------C-C-------CHHHHHHHHHHHHhcCCEEEEEEeecCCC----CCCHHHHHHHHHHHHhcC
Confidence 33 333332 1 1 126676766666554322 122232221 234688888888888877
No 285
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=46.65 E-value=80 Score=29.52 Aligned_cols=66 Identities=15% Similarity=0.179 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec--CCcc--cHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN--GNGG--FLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C--G~~~--~l~~~~e~g~ 310 (411)
+-.++.++++.++|||+|++ +. .-+++.+++ +.+.+ .+|++...- |... ..+.+.++|+
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~~-e~---~~~~~~~~~--------i~~~~-----~~P~~~n~~~~g~tp~~~~~eL~~lGv 237 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIFP-EA---LQSEEEFRL--------FNSKV-----NAPLLANMTEFGKTPYYSAEEFANMGF 237 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEE-TT---CCSHHHHHH--------HHHHS-----CSCBEEECCTTSSSCCCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEE-cC---CCCHHHHHH--------HHHHc-----CCCEEEeecCCCCCCCCCHHHHHHcCC
Confidence 45567788999999999966 22 235555444 34444 357654332 3333 3788999999
Q ss_pred cEEEcCC
Q 015201 311 DVIGLDW 317 (411)
Q Consensus 311 d~l~~d~ 317 (411)
..+++..
T Consensus 238 ~~v~~~~ 244 (305)
T 3ih1_A 238 QMVIYPV 244 (305)
T ss_dssp SEEEECS
T ss_pred CEEEEch
Confidence 9988754
No 286
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=46.32 E-value=1.8e+02 Score=26.90 Aligned_cols=117 Identities=9% Similarity=0.042 Sum_probs=63.2
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC------CcccHhHHhcCCCcEE-
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING------NGGFLERMKGTGVDVI- 313 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG------~~~~l~~~~e~g~d~l- 313 (411)
++.+.+.|++.|-+... +++.+++. ++++++.+++. |.++..|..+ ....+....+.|++.+
T Consensus 151 ~~~~~~~g~~~ik~~~~-~~~~~~~~--------l~~~~~~a~~~--g~~v~~H~~~~~~~~~~~~~i~~~~~~G~~~i~ 219 (386)
T 2vun_A 151 FIEMKKEGVWIVGEVGL-GTIKNPED--------AAPMVEWAHKH--GFKVQMHTGGTSIPGSSTVTADDVIKTKPDVVS 219 (386)
T ss_dssp HHHHHHTTCCEEEEETS-SSCCSHHH--------HHHHHHHHHHT--TCEEEEECSCCSCSTTCSCCHHHHHHHCCSEEE
T ss_pred HHHHHHhCCCeEEEeec-CCCCCHHH--------HHHHHHHHHHC--CCeEEEecCCccccccCHHHHHHHHHcCCCEEE
Confidence 44556778888766532 34566654 44677888887 6889999963 2224666667888875
Q ss_pred EcCC---CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCC
Q 015201 314 GLDW---TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGH 372 (411)
Q Consensus 314 ~~d~---~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc 372 (411)
|... ..+...+++.....+.+.. + +. .+....-...++++++.+....+++++++
T Consensus 220 H~~~~~~~~~~~~~~~~~~~g~~vl~-~-~~--~g~~~~~~~~~~~~~~~g~~d~v~lgTD~ 277 (386)
T 2vun_A 220 HINGGPTAISVQEVDRIMDETDFAME-I-VQ--CGNPKIADYVARRAAEKGQLGRVIFGNDA 277 (386)
T ss_dssp TTTCSSSCCCHHHHHHHHHHCCCEEE-E-ES--SSCHHHHHHHHHHHHHHTCGGGEEEECCB
T ss_pred EccCCCCCCCHHHHHHHHHcCCeEEE-e-cc--CCcccccHHHHHHHHHcCCCceeEEecCC
Confidence 3322 1444444332111122210 0 00 12223334455666665432378899997
No 287
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=46.29 E-value=45 Score=29.87 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCc
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVD 311 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d 311 (411)
+.+.+.+.++.+.++|+|.|.++=..+++ ..+ .+.+++.+.+++.. ++|+ +|+-.. ..+.+...|+.
T Consensus 51 ~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~--------~~~~~~~~~l~~~~-~iPv-~~~~~A--~~~al~~~g~~ 118 (240)
T 3ixl_A 51 VIESVVDHARRLQKQGAAVVSLMCTSLSFYRGA--------AFNAALTVAMREAT-GLPC-TTMSTA--VLNGLRALGVR 118 (240)
T ss_dssp HGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCH--------HHHHHHHHHHHHHH-SSCE-EEHHHH--HHHHHHHTTCS
T ss_pred HHHHHHHHHHHhccCCCCEEEECCcHHHHhccc--------chHHHHHHHHHhcc-CCCE-ECHHHH--HHHHHHHhCCC
Confidence 34556666777888899999775444443 333 45556666666653 7884 454322 34667777877
Q ss_pred EEEc--CCCCCHHHH-HH---HhCCCeeEEccCCcCc-c---CCCHHHHHHHHHHHH-HHhCCCCeEEeCCCC
Q 015201 312 VIGL--DWTVDMADG-RK---RLGNDISVQGNVDPAC-L---FSPLPALTDEIQRVV-KCAGSRGHILNLGHG 373 (411)
Q Consensus 312 ~l~~--d~~~di~~~-~~---~~g~~~~l~G~vd~~~-L---~gt~eeV~~ev~~~i-~~~~~~gfIls~gc~ 373 (411)
-+.+ -+..++.+. ++ ..|=.+....+.+-.. + .-+++++.+.+++.+ +.-+....||+ |+
T Consensus 119 rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~--CT 189 (240)
T 3ixl_A 119 RVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLS--SG 189 (240)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEE--CT
T ss_pred EEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEe--CC
Confidence 6654 223333222 12 2343333334433221 2 247888888888844 32233688887 54
No 288
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=46.22 E-value=29 Score=33.23 Aligned_cols=67 Identities=19% Similarity=0.328 Sum_probs=45.3
Q ss_pred HHhCCCEEEEecCCCC---------CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEec------C-----Ccc---
Q 015201 245 VESGAHCIQIFDSWGG---------QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYIN------G-----NGG--- 300 (411)
Q Consensus 245 ~e~G~d~i~i~D~~~~---------~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~C------G-----~~~--- 300 (411)
.++|.+.|.+-|.|.+ ..+|+.| |- +|.+++.+|++ |..+.+|.. + ...
T Consensus 41 ~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~F-----P~Gl~~l~~~ih~~--Glk~Giw~~~~~~~~~~~~pg~~~~~~ 113 (362)
T 1uas_A 41 AKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTF-----PSGIKALADYVHAK--GLKLGIYSDAGSQTCSNKMPGSLDHEE 113 (362)
T ss_dssp HHHTCCEEECCSSCBCSSCCTTSCCCBCTTTC-----TTCHHHHHHHHHHT--TCEEEEEEESSSBCTTSSSBCCTTCHH
T ss_pred hhcCCcEEEECCCcCCCCCCCCCCeeEChhcc-----CccHHHHHHHHHHC--CCEeEEEeeCCCccccCCCCCchhHHH
Confidence 6789999877665642 2333333 55 89999999998 677766664 2 111
Q ss_pred -cHhHHhcCCCcEEEcCCC
Q 015201 301 -FLERMKGTGVDVIGLDWT 318 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d~~ 318 (411)
....+.+.|+|.+=+|..
T Consensus 114 ~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 114 QDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHcCCCEEEECcc
Confidence 236678899999977653
No 289
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=46.15 E-value=28 Score=32.38 Aligned_cols=115 Identities=15% Similarity=0.257 Sum_probs=71.3
Q ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-C------CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCE
Q 015201 219 CHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-G------QLPPHMWEQWSEPYIREIVSLVRTKCPETPI 291 (411)
Q Consensus 219 l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~------~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~ 291 (411)
+|.+||.+.++.+ +.|+|.+.++=... | -+.++ +++.+++.. ++|+
T Consensus 153 ~~T~Peea~~Fv~--------------~TgvD~LAvaiGt~HG~Y~~~p~Ld~~------------~L~~I~~~~-~vpL 205 (286)
T 1gvf_A 153 FLTDPQEAKRFVE--------------LTGVDSLAVAIGTAHGLYSKTPKIDFQ------------RLAEIREVV-DVPL 205 (286)
T ss_dssp SSCCHHHHHHHHH--------------HHCCSEEEECSSCCSSCCSSCCCCCHH------------HHHHHHHHC-CSCE
T ss_pred cCCCHHHHHHHHH--------------HHCCCEEEeecCccccCcCCCCccCHH------------HHHHHHHhc-CCCE
Confidence 6899998887776 45899765542211 2 23332 244455543 6899
Q ss_pred EEEecCCcc--cHhHHhcCCCcEEEcCCCCC---HHHHHHHhCCCeeEEccCCcCc-cCCCHHHHHHHHHHHHHHhCC
Q 015201 292 VLYINGNGG--FLERMKGTGVDVIGLDWTVD---MADGRKRLGNDISVQGNVDPAC-LFSPLPALTDEIQRVVKCAGS 363 (411)
Q Consensus 292 ~~H~CG~~~--~l~~~~e~g~d~l~~d~~~d---i~~~~~~~g~~~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~~ 363 (411)
++|-.-... .+...++.|+.-+|++...- ...+++.+..+- ..+||.. +....+.+.+.+++.++.++.
T Consensus 206 VlHGgSG~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~~~~---~~~dpr~~~~~~~~a~~~~v~~~~~~~gs 280 (286)
T 1gvf_A 206 VLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAENP---QGNDPRYYMRVGMDAMKEVVRNKINVCGS 280 (286)
T ss_dssp EECCCTTCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCT---TCCCHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEECCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhCc---ccCChHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999763333 47777889999999975221 122344332111 1467764 444468899999999998874
No 290
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=45.91 E-value=1.8e+02 Score=26.62 Aligned_cols=72 Identities=6% Similarity=0.010 Sum_probs=40.2
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CC---cc--cHhHHhcCC--Cc
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GN---GG--FLERMKGTG--VD 311 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~---~~--~l~~~~e~g--~d 311 (411)
.++.+.+.|+..|.+.+...+....+.. ..+.+.++++.+++. +++. .+..+ .+ .+ .++.+++.| ++
T Consensus 41 ei~~l~~~G~~ei~l~g~~~~~yG~~~~---~~~~l~~Ll~~l~~~-~gi~-~ir~~~~~p~~l~~e~l~~l~~~g~~~~ 115 (304)
T 2qgq_A 41 EVEDLLKEGKKEIILVAQDTTSYGIDLY---RKQALPDLLRRLNSL-NGEF-WIRVMYLHPDHLTEEIISAMLELDKVVK 115 (304)
T ss_dssp HHHHHHHTTCCEEEEECTTGGGTTHHHH---SSCCHHHHHHHHHTS-SSSC-EEEECCCCGGGCCHHHHHHHHHCTTBCC
T ss_pred HHHHHHHCCCcEEEEEeEcccccCCCCC---cHHHHHHHHHHHHhc-CCCc-EEEEeeeecccCCHHHHHHHHhCCCCcc
Confidence 3445556788888776532222222211 135677888888875 2443 23332 22 12 468888888 78
Q ss_pred EEEcC
Q 015201 312 VIGLD 316 (411)
Q Consensus 312 ~l~~d 316 (411)
.+++.
T Consensus 116 ~l~i~ 120 (304)
T 2qgq_A 116 YFDVP 120 (304)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 77653
No 291
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=45.83 E-value=1e+02 Score=29.21 Aligned_cols=66 Identities=21% Similarity=0.224 Sum_probs=41.2
Q ss_pred HHHHHHHHh--CCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVES--GAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~--G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
+.++.+++. |++.+.+.-..+ .+ +...+.++.+++.++++|+++..+.+........+.|+|++.+
T Consensus 121 ~~~~~l~~~~~g~~~i~i~~~~g---~~--------~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v 188 (351)
T 2c6q_A 121 EQLEQILEAIPQVKYICLDVANG---YS--------EHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKV 188 (351)
T ss_dssp HHHHHHHHHCTTCCEEEEECSCT---TB--------HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhccCCCCEEEEEecCC---Cc--------HHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEE
Confidence 345556666 999886643222 12 1233456667776556787776655544567788999999955
No 292
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=45.73 E-value=1.2e+02 Score=30.76 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEE
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVI 313 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l 313 (411)
..+.+++++++|+|.|++ |..-+ -|.. ..+.++.+++.+|+++++ .||+. -...+.+.|+|++
T Consensus 282 ~~eR~~aLv~AGvD~ivi-D~ahG-hs~~---------v~~~i~~ik~~~p~~~vi---aGNVaT~e~a~~Li~aGAD~v 347 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVL-DSSQG-NSVY---------QIEFIKWIKQTYPKIDVI---AGNVVTREQAAQLIAAGADGL 347 (556)
T ss_dssp HHHHHHHHHHTTCCEEEE-CCSCC-CSHH---------HHHHHHHHHHHCTTSEEE---EEEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhcCCcEEEE-ecccc-ccHH---------HHHHHHHHHhhCCcceEE---eccccCHHHHHHHHHcCCCEE
Confidence 456778899999999865 43333 2322 234566677776666654 46653 4677889999998
Q ss_pred EcC--CC-------------------CCHHHHHHHhCCCeeEEccCCc
Q 015201 314 GLD--WT-------------------VDMADGRKRLGNDISVQGNVDP 340 (411)
Q Consensus 314 ~~d--~~-------------------~di~~~~~~~g~~~~l~G~vd~ 340 (411)
-+. .. .+..++.+.+|-.++-=|||-.
T Consensus 348 kVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~ 395 (556)
T 4af0_A 348 RIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGN 395 (556)
T ss_dssp EECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCS
T ss_pred eecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCc
Confidence 431 10 1345666667655555676643
No 293
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=45.27 E-value=90 Score=27.35 Aligned_cols=73 Identities=10% Similarity=-0.093 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--c-HhHHhcC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQL---PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--F-LERMKGT 308 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~i---Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~-l~~~~e~ 308 (411)
+.+.+.++...+.|++.+.+.-....-. +++...+.+...++++.+.++++ |+.+.+|.++..+ . ...+.+.
T Consensus 76 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~l~~~v 153 (254)
T 3ayv_A 76 RRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTL--GVRLLLENSHEPHPEALRPVLEAH 153 (254)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHH--TCEEEEECSSCSSGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhc--CCEEEEcCCCCCCHHHHHHHHHhc
Confidence 4455566677788999987764433322 23555577888899999999887 6888999886432 2 3444445
Q ss_pred C
Q 015201 309 G 309 (411)
Q Consensus 309 g 309 (411)
+
T Consensus 154 ~ 154 (254)
T 3ayv_A 154 A 154 (254)
T ss_dssp T
T ss_pred C
Confidence 5
No 294
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=45.23 E-value=69 Score=31.86 Aligned_cols=67 Identities=18% Similarity=0.267 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.++++|+|.+.+.-..+. + +...++++.+++..|++|+++-..........+.+.|+|.+.+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G~--~---------~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHGH--S---------RRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCS--S---------HHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEEecCCc--h---------HHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 45677788999999876332221 1 2233566677776666787663222222457778899999976
No 295
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=45.04 E-value=17 Score=32.04 Aligned_cols=116 Identities=18% Similarity=0.227 Sum_probs=69.5
Q ss_pred HhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEE--EEecCCcccHhHHhcCCCcEEEcCC------
Q 015201 246 ESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIV--LYINGNGGFLERMKGTGVDVIGLDW------ 317 (411)
Q Consensus 246 e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~--~H~CG~~~~l~~~~e~g~d~l~~d~------ 317 (411)
+.+.|.++++.+ -+|+..+++ + . +.+++ ++.-.... + .+.++.+|.+-+|.
T Consensus 73 ~~~ld~vQLHG~----e~~~~~~~l------------~-~--~~~vika~~v~~~~~-l-~~~~~~~d~~LlD~~~gGtG 131 (203)
T 1v5x_A 73 EARLQVAQLHGE----EPPEWAEAV------------G-R--FYPVIKAFPLEGPAR-P-EWADYPAQALLLDGKRPGSG 131 (203)
T ss_dssp HTTCSEEEECSC----CCHHHHHHH------------T-T--TSCEEEEEECSSSCC-G-GGGGSSCSEEEEECSSTTSC
T ss_pred hhCCCEEEECCC----CCHHHHHHh------------c-c--CCCEEEEEEcCChHh-h-hhhhcCCCEEEEcCCCCCCC
Confidence 568999999733 477644332 1 1 23443 44433222 3 33444467665543
Q ss_pred -CCCHHHHHH--HhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC-CcHHHHHHHHHHHHhc
Q 015201 318 -TVDMADGRK--RLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVG-TPEEAVAHFFEVGKSM 393 (411)
Q Consensus 318 -~~di~~~~~--~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~-tp~Eni~a~~~a~~~y 393 (411)
..|...+++ .......+.||++|. .| .+.+ ..++-|.-+++|-...+| -+++.|++|+++++++
T Consensus 132 ~~fdW~~l~~~~~~~~p~~LAGGL~pe-------NV----~~ai-~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r~~ 199 (203)
T 1v5x_A 132 EAYPRAWAKPLLATGRRVILAGGIAPE-------NL----EEVL-ALRPYALDLASGVEEAPGVKSAEKLRALFARLASL 199 (203)
T ss_dssp CCCCGGGGHHHHHTTSCEEECSSCCST-------TH----HHHH-HHCCSEEEESGGGEEETTEECHHHHHHHHHHHHHT
T ss_pred CccCHHHHHhhhccCCcEEEECCCCHH-------HH----HHHH-hcCCCEEEeCCceecCCCCcCHHHHHHHHHHHHHh
Confidence 235555544 223457788888873 23 3334 346678999999776455 5899999999999986
Q ss_pred C
Q 015201 394 K 394 (411)
Q Consensus 394 g 394 (411)
.
T Consensus 200 ~ 200 (203)
T 1v5x_A 200 R 200 (203)
T ss_dssp C
T ss_pred h
Confidence 4
No 296
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=44.87 E-value=2.2e+02 Score=27.38 Aligned_cols=71 Identities=14% Similarity=0.015 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-------CC--c-c---cHhHHh-cCC--CcEEEcC-------CC
Q 015201 262 LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-------GN--G-G---FLERMK-GTG--VDVIGLD-------WT 318 (411)
Q Consensus 262 iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-------G~--~-~---~l~~~~-e~g--~d~l~~d-------~~ 318 (411)
++.+.-++.+...++++++.+.++ |+.+.+|.. |- . . .+..+. ..+ ...+.+| ..
T Consensus 189 ~~~e~~w~~l~~~L~~i~~~Aee~--GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vdsp~~gl~lDtG~l~~~~~ 266 (386)
T 3bdk_A 189 ISEEDLWANLEYFIKAILPTAEEA--GVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPK 266 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSS--SCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTCSTTEEEEEEHHHHHTSTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh--CCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcCCCCEEEEEccCchhhcCC
Confidence 454566677888899999999876 788999974 22 1 1 233333 333 3445443 25
Q ss_pred CCHHHHHHHhC--CCeeE
Q 015201 319 VDMADGRKRLG--NDISV 334 (411)
Q Consensus 319 ~di~~~~~~~g--~~~~l 334 (411)
.|+.++-++++ +++..
T Consensus 267 ~D~~~~i~~~~~~~RI~h 284 (386)
T 3bdk_A 267 NDVLAMTEYALKRNRINF 284 (386)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHhCCcCeEEE
Confidence 78999999998 87766
No 297
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=44.30 E-value=1.4e+02 Score=25.96 Aligned_cols=138 Identities=19% Similarity=0.212 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHhCCceeEEEe--cccHHHHHHHH-HcCCCCccHHHHHHHHhhCHHHHHHHHHHHHH-------------
Q 015201 172 VGDSLKILRKEVGEHAAVLGF--VGAPWTIATYI-VEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQ------------- 235 (411)
Q Consensus 172 ~~eaik~l~~~~~~~~~v~~~--~~gPft~a~~l-~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d------------- 235 (411)
..+.++.+++.+ .+|+++. +..|-.....+ .|. ... .+-..++.+|+.+.++.+....
T Consensus 65 ~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Ga---d~V-~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~ 138 (253)
T 1h5y_A 65 FIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGA---DKV-SVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNG 138 (253)
T ss_dssp HHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTC---SEE-EESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECS
T ss_pred cHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCC---CEE-EEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCC
Confidence 345566677765 3666543 33454432222 221 111 0113456789888887766431
Q ss_pred ----------------HHHHHHHHHHHhCCCEEEEecCCC-C-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 236 ----------------AIADYIIYQVESGAHCIQIFDSWG-G-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 236 ----------------~~~~~~~~~~e~G~d~i~i~D~~~-~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
...+.++.+.+.|+|.|.+..-.. + .-.+ -+.+++++.+.. ++|++ ..|
T Consensus 139 g~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~------~~~~i~~l~~~~-----~~pvi--a~G 205 (253)
T 1h5y_A 139 EYYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGY------DVELIRRVADSV-----RIPVI--ASG 205 (253)
T ss_dssp SSEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCC------CHHHHHHHHHHC-----SSCEE--EES
T ss_pred CcEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcC------CHHHHHHHHHhc-----CCCEE--EeC
Confidence 235667888899999997764221 1 1111 123334444332 46754 445
Q ss_pred Ccc---cHhHHhcCCCcEEEcC-----CCCCHHHHHHHh
Q 015201 298 NGG---FLERMKGTGVDVIGLD-----WTVDMADGRKRL 328 (411)
Q Consensus 298 ~~~---~l~~~~e~g~d~l~~d-----~~~di~~~~~~~ 328 (411)
.+. .+..+.+.|++++.+. ...++.++++.+
T Consensus 206 Gi~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 206 GAGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp CCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHH
Confidence 543 4666667899998653 234666666554
No 298
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=44.06 E-value=30 Score=30.93 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=50.2
Q ss_pred hHHhcCCCcEEEcCC------CCCHHHHHHH-hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 303 ERMKGTGVDVIGLDW------TVDMADGRKR-LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 303 ~~~~e~g~d~l~~d~------~~di~~~~~~-~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
..+....+|.+-+|. ..|..-++.. ......|.||++|. .|.+.++..++-|.=+|+|-+-|
T Consensus 140 ~~~~~~~~d~~LlDs~GGtG~~fDW~~~~~~~~~~p~iLAGGL~pe-----------NV~~Ai~~~~P~gVDVsSGVEs~ 208 (228)
T 4aaj_A 140 SEISRYNADMVLLDTGAGSGKLHDLRVSSLVARKIPVIVAGGLNAE-----------NVEEVIKVVKPYGVDVSSGVEKY 208 (228)
T ss_dssp HHHHHSCCSEEEEEC-------CCCHHHHHHHHHSCEEEESSCCTT-----------THHHHHHHHCCSEEEESGGGEET
T ss_pred HHHhccCCCEEccCCCCCCcCcCChHHHHHhhhcCCeEEECCCCHH-----------HHHHHHHHhCCCEEEeCCCCCCC
Confidence 344455677765542 2344333321 12247889999883 23445555677778888887754
Q ss_pred CCCcHHHHHHHHHHHHhc
Q 015201 376 VGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 376 ~~tp~Eni~a~~~a~~~y 393 (411)
.--+++.|++|++++|+.
T Consensus 209 G~KD~~KI~~Fi~~vr~v 226 (228)
T 4aaj_A 209 GIKDPKLVEEFVRRAKNV 226 (228)
T ss_dssp TEECHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHhcc
Confidence 334889999999999974
No 299
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=43.95 E-value=1.6e+02 Score=25.83 Aligned_cols=158 Identities=13% Similarity=0.019 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-----c--cH-hH
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-----G--FL-ER 304 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-----~--~l-~~ 304 (411)
.+.+.+.++...+.|++.+.+.-.... -.+.+...+.+...++++.+.++++ |+.+.+|..+.. + .+ ..
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~~~~~~l 160 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPY--GVKIALEFVGHPQCTVNTFEQAYEI 160 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGG--TCEEEEECCCCTTBSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEecCCccchhcCHHHHHHH
Confidence 344556666777889999877432221 2565666778889999999999887 788999988653 1 12 33
Q ss_pred HhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeEE---ccCCc---------CccCCCHHHHHHHHHHHHHHhCC-
Q 015201 305 MKGTGVDV--IGLD------WTVDMADGRKRLGNDISVQ---GNVDP---------ACLFSPLPALTDEIQRVVKCAGS- 363 (411)
Q Consensus 305 ~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~---G~vd~---------~~L~gt~eeV~~ev~~~i~~~~~- 363 (411)
+.+.+-.. +.+| ...|+.++.+.+++++..+ .+... ....|+-.-=-+.+.+.++..+-
T Consensus 161 ~~~~~~~~~g~~~D~~h~~~~g~d~~~~~~~~~~~i~~vHl~D~~~~~~g~~~~~~~~~~G~G~id~~~~~~~L~~~gy~ 240 (278)
T 1i60_A 161 VNTVNRDNVGLVLDSFHFHAMGSNIESLKQADGKKIFIYHIDDTEDFPIGFLTDEDRVWPGQGAIDLDAHLSALKEIGFS 240 (278)
T ss_dssp HHHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECEECCCCTTTCCGGGEESTTSSSSCHHHHHHHHHHTTCC
T ss_pred HHHhCCCCeeEEEEeEEEeecCCCHHHHHhcCcceEEEEEecCCCCCCccchhhccCCCCCCCCCcHHHHHHHHHHcCCC
Confidence 33444322 3333 2458888888777665431 11110 11223221112345555666553
Q ss_pred CCeEEeCCCC-CCCCCcHHHHHHHHHHHHhc
Q 015201 364 RGHILNLGHG-VLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 364 ~gfIls~gc~-i~~~tp~Eni~a~~~a~~~y 393 (411)
|-+++-.... .+...|.|.++.-++..++.
T Consensus 241 g~~~lE~~~~~~~~~~~~~~~~~~~~~l~~~ 271 (278)
T 1i60_A 241 DVVSVELFRPEYYKLTAEEAIQTAKKTTVDV 271 (278)
T ss_dssp SEEEECCCCGGGGGSCHHHHHHHHHHHHHHH
T ss_pred ceEEEEecCcccccCCHHHHHHHHHHHHHHH
Confidence 4455543321 11235677777777777765
No 300
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.89 E-value=1.7e+02 Score=25.67 Aligned_cols=157 Identities=17% Similarity=0.175 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC--CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-------c----cc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG--GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-------G----GF 301 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~--~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-------~----~~ 301 (411)
+.+.+.++...+.|++.+.+.-... +-.+.+...+.+...++++.+.++++ |+.+.+|.... . ..
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lE~~~~~~~~~~~~~~~~~~ 160 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAA--GVPLAIEPLHPMYAADRACVNTLGQ 160 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEECCCCGGGTTTTBSCCCHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEeECCCcccCCccccCCHHH
Confidence 3445566677788999887763221 12466666688889999999999988 68889997421 1 11
Q ss_pred -HhHHhcCCC-cEEEcC-----CCCCHHHHHHHhC--CCeeEE--cc-CCc------C-ccCCCHHHHHHHHHHHHHHhC
Q 015201 302 -LERMKGTGV-DVIGLD-----WTVDMADGRKRLG--NDISVQ--GN-VDP------A-CLFSPLPALTDEIQRVVKCAG 362 (411)
Q Consensus 302 -l~~~~e~g~-d~l~~d-----~~~di~~~~~~~g--~~~~l~--G~-vd~------~-~L~gt~eeV~~ev~~~i~~~~ 362 (411)
.+.+.+.+- -.+.+| ...|+.+.-++++ +++..+ -. ..+ . ...|+-+-=-+.+.+.++..+
T Consensus 161 ~~~l~~~~~~~vg~~~D~~h~~~~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~r~~~G~G~id~~~~~~~L~~~g 240 (275)
T 3qc0_A 161 ALDICETLGPGVGVAIDVYHVWWDPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMMGDGVIDLKGIRRRIEAAG 240 (275)
T ss_dssp HHHHHHHHCTTEEEEEEHHHHTTCTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCTTSSCCCHHHHHHHHHHTT
T ss_pred HHHHHHHhCcccEEEEEhhhheeCCCHHHHHHHcCccceEEEEEecCCCCCcccccCCCcCCCCCccCHHHHHHHHHHcC
Confidence 233334442 112232 2357777777776 455432 11 111 1 112222111244455555555
Q ss_pred C-CCeEEeCCCC--CCCCCcHHHHHHHHHHHHhc
Q 015201 363 S-RGHILNLGHG--VLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 363 ~-~gfIls~gc~--i~~~tp~Eni~a~~~a~~~y 393 (411)
- |-+++-.-.. ....-|.|.++.-++..+++
T Consensus 241 y~g~~~~E~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (275)
T 3qc0_A 241 FHGAQEVEIFSADNWWKRPADEVIATCVERYRNC 274 (275)
T ss_dssp CCCCEEECCCBTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCccccccCCHHHHHHHHHHHhcCC
Confidence 3 4454543221 11235778888888877764
No 301
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=43.76 E-value=96 Score=28.96 Aligned_cols=73 Identities=12% Similarity=0.062 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCC--------------CC-HHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQ--------------LP-PHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-- 300 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~--------------iS-p~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-- 300 (411)
.+.++.+.++|+|+|.+.....+. +| +.. ....+.+.+++.+.+. +++|++ .+|.+.
T Consensus 228 ~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~-~~~~~~~i~~i~~~~~---~~ipVi--~~GGI~~~ 301 (336)
T 1f76_A 228 IQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPL-QLKSTEIIRRLSLELN---GRLPII--GVGGIDSV 301 (336)
T ss_dssp HHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGG-HHHHHHHHHHHHHHHT---TSSCEE--EESSCCSH
T ss_pred HHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchh-HHHHHHHHHHHHHHhC---CCCCEE--EECCCCCH
Confidence 555778889999999887542110 11 111 1122334444444332 156754 566654
Q ss_pred -cHhHHhcCCCcEEEcC
Q 015201 301 -FLERMKGTGVDVIGLD 316 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d 316 (411)
....+...|+|.+.+.
T Consensus 302 ~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 302 IAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHCCCCEEEee
Confidence 2455556799998764
No 302
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=43.39 E-value=37 Score=30.66 Aligned_cols=112 Identities=21% Similarity=0.264 Sum_probs=69.4
Q ss_pred HHHHhCCCEEEEecC-------CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 243 YQVESGAHCIQIFDS-------WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~-------~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
...+..++.+++.-. -+|+==... .+ +++.+++.+++. |+.+.+++..+...++.-.++|.+.+-+
T Consensus 82 ia~~~kP~~vtLVPE~r~e~TTegGldv~~~-~~----~l~~~i~~L~~~--GIrVSLFIDpd~~qi~aA~~~GA~~IEL 154 (243)
T 1m5w_A 82 IAVETKPHFCCLVPEKRQEVTTEGGLDVAGQ-RD----KMRDACKRLADA--GIQVSLFIDADEEQIKAAAEVGAPFIEI 154 (243)
T ss_dssp HHHHHCCSEEEECCCCSSCSSCCSCCCSGGG-HH----HHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHTTCSEEEE
T ss_pred HHHHcCCCEEEECCCCCCCcCCCcchhHHhh-HH----HHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHhCcCEEEE
Confidence 344567888776532 123211111 23 455666677777 7899999998888899999999999877
Q ss_pred CCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC---CCCeEEeCCCCCCCCCcHHHHHHH
Q 015201 316 DWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG---SRGHILNLGHGVLVGTPEEAVAHF 386 (411)
Q Consensus 316 d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~---~~gfIls~gc~i~~~tp~Eni~a~ 386 (411)
... ...++ .++++..++..++.+... .-|.-++.||++- .+|+..+
T Consensus 155 hTG-~Ya~a--------------------~~~~~~~~el~~i~~aa~~A~~lGL~VnAGHgL~----y~Nv~~i 203 (243)
T 1m5w_A 155 HTG-CYADA--------------------KTDAEQAQELARIAKAATFAASLGLKVNAGHGLT----YHNVKAI 203 (243)
T ss_dssp ECH-HHHHC--------------------CSHHHHHHHHHHHHHHHHHHHHTTCEEEEESSCC----TTTHHHH
T ss_pred ech-hhhcC--------------------CCchhHHHHHHHHHHHHHHHHHcCCEEecCCCCC----HHHHHHH
Confidence 432 11111 133334455555555432 3689999999987 4466665
No 303
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=42.92 E-value=1.9e+02 Score=26.52 Aligned_cols=100 Identities=11% Similarity=0.086 Sum_probs=60.3
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC----------Ccc-cHhHHhcCCCcEEEcCC
Q 015201 249 AHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING----------NGG-FLERMKGTGVDVIGLDW 317 (411)
Q Consensus 249 ~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG----------~~~-~l~~~~e~g~d~l~~d~ 317 (411)
+|++-++-....++++ +++.++.+|++ |++ +..-| ... +++..+++|++++-+..
T Consensus 66 ID~lKfg~GTs~l~~~----------l~ekI~l~~~~--gV~--v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISd 131 (276)
T 1u83_A 66 IDFVKFGWGTSLLTKD----------LEEKISTLKEH--DIT--FFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISN 131 (276)
T ss_dssp CCEEEECTTGGGGCTT----------HHHHHHHHHHT--TCE--EEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECC
T ss_pred cceEEecCcchhhhHH----------HHHHHHHHHHc--CCe--EeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECC
Confidence 6777664333334444 78889999998 654 33444 333 46777789999998754
Q ss_pred C---CCH---HHHHHHhCCCeeEE---ccCCcCc-cCCCHHHHHHHHHHHHHHhC
Q 015201 318 T---VDM---ADGRKRLGNDISVQ---GNVDPAC-LFSPLPALTDEIQRVVKCAG 362 (411)
Q Consensus 318 ~---~di---~~~~~~~g~~~~l~---G~vd~~~-L~gt~eeV~~ev~~~i~~~~ 362 (411)
. ++. .++.++..+...+. |.=|+.. -.-++++..+.+++.|+++.
T Consensus 132 Gti~l~~~~~~~lI~~a~~~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA 186 (276)
T 1u83_A 132 GTLPMTNKEKAAYIADFSDEFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGA 186 (276)
T ss_dssp SSSCCCHHHHHHHHHHHTTTSEEEEECSCCC------CCSTHHHHHHHHHHHHTE
T ss_pred CcccCCHHHHHHHHHHHHhhcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCC
Confidence 3 232 22333343444443 4444422 13588999999999999864
No 304
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=42.90 E-value=3.2e+02 Score=28.69 Aligned_cols=141 Identities=18% Similarity=0.233 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHhCCCE--EEEecCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC-----Cc
Q 015201 235 QAIADYIIYQVESGAHC--IQIFDSWGG--------QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING-----NG 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~--i~i~D~~~~--------~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG-----~~ 299 (411)
+-.+++++++.++|++. |-+ ||+ +.+..-|+ +++++.+.++ +.++..+.-| ..
T Consensus 125 edkl~Ia~~Ld~~Gvg~~~IE~---gGGatfd~~~~f~~e~p~e-----~l~~l~~~~~----~~~l~~l~R~~n~vgy~ 192 (718)
T 3bg3_A 125 HDLKKIAPYVAHNFSKLFSMEN---WGGATFDVAMRFLYECPWR-----RLQELRELIP----NIPFQMLLRGANAVGYT 192 (718)
T ss_dssp HHHHHHHHHHHHHCTTCSEEEE---EETTHHHHHHHTSCCCHHH-----HHHHHHHHCS----SSCEEEEECGGGTTSSS
T ss_pred HHHHHHHHHHHHhcCCCcEEEe---cCCcchhhccccCCCCHHH-----HHHHHHHHcc----cchHHHHhccccccccc
Confidence 44567777888887665 533 321 45444443 3445555553 4556656544 21
Q ss_pred -------c-cHhHHhcCCCcEEEc-CCCCCHHHHHH------HhCCCeeEEccCCcC----c-cCC--CHHHHHHHHHHH
Q 015201 300 -------G-FLERMKGTGVDVIGL-DWTVDMADGRK------RLGNDISVQGNVDPA----C-LFS--PLPALTDEIQRV 357 (411)
Q Consensus 300 -------~-~l~~~~e~g~d~l~~-d~~~di~~~~~------~~g~~~~l~G~vd~~----~-L~g--t~eeV~~ev~~~ 357 (411)
. .++...+.|++++.+ +...++..+++ ..|. .+.+.+.-. . ..+ +++.+.+.++++
T Consensus 193 ~~p~~~~~~~i~~a~~~Gvd~irIf~s~n~l~~l~~~i~~ak~~G~--~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l 270 (718)
T 3bg3_A 193 NYPDNVVFKFCEVAKENGMDVFRVFDSLNYLPNMLLGMEAAGSAGG--VVEAAISYTGDVADPSRTKYSLQYYMGLAEEL 270 (718)
T ss_dssp CCCHHHHHHHHHHHHHHTCCEEEEECSSCCHHHHHHHHHHHHTTTS--EEEEEEECCSCTTCTTCCTTCHHHHHHHHHHH
T ss_pred ccCCcchHHHHHHHHhcCcCEEEEEecHHHHHHHHHHHHHHHHcCC--eEEEEEEeeccccCCCCCCCCHHHHHHHHHHH
Confidence 1 356677889999864 44445554432 2342 333333221 1 113 788888888888
Q ss_pred HHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 358 VKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 358 i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.+.+. .+++...++ ....|+.+..+++++++.
T Consensus 271 ~~~Ga---~~I~l~DT~-G~~~P~~v~~lV~~lk~~ 302 (718)
T 3bg3_A 271 VRAGT---HILCIKDMA-GLLKPTACTMLVSSLRDR 302 (718)
T ss_dssp HHHTC---SEEEEECTT-SCCCHHHHHHHHHHHHHH
T ss_pred HHcCC---CEEEEcCcC-CCcCHHHHHHHHHHHHHh
Confidence 87643 344443333 334577788888888764
No 305
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=42.42 E-value=66 Score=31.33 Aligned_cols=66 Identities=18% Similarity=0.180 Sum_probs=43.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
.+.++.++++|+|.|.+ |...+ .|+. +.++++.+++.. +++++...+........+.+.|+|.+.+
T Consensus 146 ~e~~~~lveaGvdvIvl-dta~G--~~~~--------~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVL-DSAHG--HSLN--------IIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEE-CCSCC--SBHH--------HHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE-eCCCC--Cccc--------HHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCCCEEEE
Confidence 46678889999998854 43322 2322 234456666654 5777776666555667788999999866
No 306
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=42.42 E-value=91 Score=32.22 Aligned_cols=87 Identities=17% Similarity=0.285 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH----------HHHHHHHHHHHHHHHHHhhC-CC
Q 015201 224 HVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM----------WEQWSEPYIREIVSLVRTKC-PE 288 (411)
Q Consensus 224 e~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~----------f~ef~~Py~k~i~~~i~~~~-~g 288 (411)
|.++++.+ ...+.++...++|.|+|-+.-.-+ .|+||.. ++. =.-+..++++.+++.. ++
T Consensus 134 ~ei~~~i~----~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~-r~r~~~eiv~avr~~vG~~ 208 (671)
T 1ps9_A 134 EEILQLID----NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRN-RMRFAVEVVRAVRERVGND 208 (671)
T ss_dssp HHHHHHHH----HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHH----HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHH-HHHHHHHHHHHHHHHcCCC
Confidence 44444444 444556677889999998764322 1344411 111 1233445555555543 35
Q ss_pred CCEEEEec-------CCcc-----cHhHHhcCCCcEEEc
Q 015201 289 TPIVLYIN-------GNGG-----FLERMKGTGVDVIGL 315 (411)
Q Consensus 289 ~~~~~H~C-------G~~~-----~l~~~~e~g~d~l~~ 315 (411)
.|+.+-+. |... +...+.+.|+|.+++
T Consensus 209 ~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 209 FIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp SEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred ceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence 66655332 3221 235666789999975
No 307
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=42.30 E-value=1.8e+02 Score=25.64 Aligned_cols=123 Identities=13% Similarity=0.101 Sum_probs=68.8
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc--C-
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL--D- 316 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~--d- 316 (411)
.++.+.++|+|.|.+ |.. ...+|+. .+++++.+++. |. .++..|.+........+.|+|.+.+ .
T Consensus 93 ~i~~~~~aGad~I~l-~~~-~~~~p~~--------l~~~i~~~~~~--g~-~v~~~v~t~eea~~a~~~Gad~Ig~~~~g 159 (229)
T 3q58_A 93 DVDALAQAGADIIAF-DAS-FRSRPVD--------IDSLLTRIRLH--GL-LAMADCSTVNEGISCHQKGIEFIGTTLSG 159 (229)
T ss_dssp HHHHHHHHTCSEEEE-ECC-SSCCSSC--------HHHHHHHHHHT--TC-EEEEECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred HHHHHHHcCCCEEEE-Ccc-ccCChHH--------HHHHHHHHHHC--CC-EEEEecCCHHHHHHHHhCCCCEEEecCcc
Confidence 345667899998854 332 2356643 34456666665 55 4566776655667778899999942 1
Q ss_pred -------CCCCHHHHHHHhCC--CeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHH
Q 015201 317 -------WTVDMADGRKRLGN--DISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFF 387 (411)
Q Consensus 317 -------~~~di~~~~~~~g~--~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~ 387 (411)
...|+..+++.... .+.--||| .|++++. ++++. |-.++++++. +- -|..-.++|+
T Consensus 160 ~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI------~t~~d~~----~~~~~-GadgV~VGsa--i~--~p~~~~~~f~ 224 (229)
T 3q58_A 160 YTGPITPVEPDLAMVTQLSHAGCRVIAEGRY------NTPALAA----NAIEH-GAWAVTVGSA--IT--RIEHICQWFS 224 (229)
T ss_dssp SSSSCCCSSCCHHHHHHHHTTTCCEEEESSC------CSHHHHH----HHHHT-TCSEEEECHH--HH--CHHHHHHHHH
T ss_pred CCCCCcCCCCCHHHHHHHHHcCCCEEEECCC------CCHHHHH----HHHHc-CCCEEEEchH--hc--ChHHHHHHHH
Confidence 12466555544321 23334554 3566664 34443 3357777643 21 2455566666
Q ss_pred HHH
Q 015201 388 EVG 390 (411)
Q Consensus 388 ~a~ 390 (411)
++.
T Consensus 225 ~~~ 227 (229)
T 3q58_A 225 HAV 227 (229)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 308
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=42.24 E-value=78 Score=29.23 Aligned_cols=62 Identities=15% Similarity=0.139 Sum_probs=39.7
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
-++..+++|+|.|.+ |. ++|++.++.+ +.+++.++++ .+-.-|.++ .+..+.++|+|++++.
T Consensus 206 ea~eal~aGaD~I~L-Dn----~~~~~~~~~v--------~~l~~~~~~v--~ieaSGGIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 206 QLDAVLPEKPELILL-DN----FAVWQTQTAV--------QRRDSRAPTV--MLESSGGLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHGGGCCSEEEE-ET----CCHHHHHHHH--------HHHHHHCTTC--EEEEESSCCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHcCCCEEEE-CC----CCHHHHHHHH--------HHhhccCCCe--EEEEECCCCHHHHHHHHhcCCCEEEEC
Confidence 344445679998744 44 6887666543 3344432233 344557665 6999999999999874
No 309
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=42.19 E-value=89 Score=27.73 Aligned_cols=75 Identities=9% Similarity=-0.003 Sum_probs=43.8
Q ss_pred hcCCCcEEEcCCCCCHHHHHHHhCC-CeeEEccCCcCccC-------CCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC-C
Q 015201 306 KGTGVDVIGLDWTVDMADGRKRLGN-DISVQGNVDPACLF-------SPLPALTDEIQRVVKCAGSRGHILNLGHGVL-V 376 (411)
Q Consensus 306 ~e~g~d~l~~d~~~di~~~~~~~g~-~~~l~G~vd~~~L~-------gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~-~ 376 (411)
.+.|.+++-... ..+.++++.+++ .+.+-|||.++... .||+++ ++. |...+|.+.+ |- .
T Consensus 152 ~~~G~~g~v~~~-~~i~~lr~~~~~~~i~v~gGI~~~~~~~~dq~rv~tp~~a-------~~a-Gad~iVvGr~--I~~a 220 (239)
T 1dbt_A 152 EESGLDGVVCSV-HEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAIA-------REK-GSSAIVVGRS--ITKA 220 (239)
T ss_dssp HHTTCSEEECCG-GGHHHHTTTSCTTCEEEECCBCCTTSCCTTCSSCBCHHHH-------HHT-TCSEEEECHH--HHTS
T ss_pred HHhCCCEEEECH-HHHHHHHHhcCCCcEEEeCCcCCCCCCccceeccCCHHHH-------HHc-CCCEEEEChh--hcCC
Confidence 346777764443 467778877763 36888999986431 345544 333 3234444433 32 1
Q ss_pred CCcHHHHHHHHHHHH
Q 015201 377 GTPEEAVAHFFEVGK 391 (411)
Q Consensus 377 ~tp~Eni~a~~~a~~ 391 (411)
.-|.+.++++.+..+
T Consensus 221 ~dp~~a~~~l~~~i~ 235 (239)
T 1dbt_A 221 EDPVKAYKAVRLEWE 235 (239)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH
Confidence 126788888877665
No 310
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=42.10 E-value=54 Score=30.08 Aligned_cols=71 Identities=15% Similarity=0.072 Sum_probs=49.0
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC-----CCCCcHHHHHHHHHHHHhcCC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGV-----LVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i-----~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++.+.+++++.-.++++|. ++++..++++++++..+=.|+-+++.... +.....+.+..+++.+.++|.
T Consensus 84 ~~~~~~~~p~r~~~~~~v~p~----~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 159 (327)
T 2dvt_A 84 LAEECAKRPDRFLAFAALPLQ----DPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDV 159 (327)
T ss_dssp HHHHHHHCTTTEEEEECCCTT----SHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHhhCCCceEEEeecCcC----CHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcCC
Confidence 455566788877777889884 46667788888887654357777765421 112334678999999999974
No 311
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=42.03 E-value=1.8e+02 Score=25.48 Aligned_cols=96 Identities=8% Similarity=0.103 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC---CcEE-EcCCCCCHHHHHHHhCCCeeEEccCCcCccC
Q 015201 270 WSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG---VDVI-GLDWTVDMADGRKRLGNDISVQGNVDPACLF 344 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g---~d~l-~~d~~~di~~~~~~~g~~~~l~G~vd~~~L~ 344 (411)
.-.|.+.++++.+.+. |.|+++|+..... .++.+.+.+ ..++ +. ...+...+++.+...+-+ .++.....
T Consensus 108 ~q~~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~l~~~~~p~~~~v~H~-~~~~~~~~~~~~~~g~~~--~~sg~~~~ 182 (265)
T 1yix_A 108 RQQESFIHHIQIGREL--NKPVIVHTRDARADTLAILREEKVTDCGGVLHC-FTEDRETAGKLLDLGFYI--SFSGIVTF 182 (265)
T ss_dssp HHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHTTGGGTCEEETT-CCSCHHHHHHHHTTTCEE--EECGGGGS
T ss_pred HHHHHHHHHHHHHHHh--CCCEEEEecCchHHHHHHHHhcCCCCCCEEEEc-CCCCHHHHHHHHHCCcEE--EECCcccc
Confidence 3456777888888887 7999999875544 456666653 2333 33 223566666655433322 11221112
Q ss_pred CCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 345 SPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
...+ .++++++..+..+++++++...
T Consensus 183 ~~~~----~~~~~~~~~~~drll~~TD~P~ 208 (265)
T 1yix_A 183 RNAE----QLRDAARYVPLDRLLVETDSPY 208 (265)
T ss_dssp TTCH----HHHHHHHHSCGGGEEECCCBTS
T ss_pred CchH----HHHHHHHhCChHHEEEecCCCC
Confidence 2233 3466777766578999999754
No 312
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=41.91 E-value=87 Score=29.20 Aligned_cols=53 Identities=17% Similarity=0.204 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
-.++.++...++|+|++.+.-++ ...| .+-+.-|++.+.+.... ++|++++.+
T Consensus 90 ~ai~la~~A~~~Gadavlv~~P~-~~~s----~~~l~~~f~~va~a~~~---~lPiilYn~ 142 (313)
T 3dz1_A 90 AMRRLARLSMDAGAAGVMIAPPP-SLRT----DEQITTYFRQATEAIGD---DVPWVLQDY 142 (313)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCT-TCCS----HHHHHHHHHHHHHHHCT---TSCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEECCCC-CCCC----HHHHHHHHHHHHHhCCC---CCcEEEEeC
Confidence 34566677778899999887666 3334 35577788888888731 378877775
No 313
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=41.49 E-value=60 Score=30.05 Aligned_cols=68 Identities=26% Similarity=0.380 Sum_probs=47.9
Q ss_pred HHHHHhCCCEEEEecC----------CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-----c-cHhHH
Q 015201 242 IYQVESGAHCIQIFDS----------WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-----G-FLERM 305 (411)
Q Consensus 242 ~~~~e~G~d~i~i~D~----------~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-----~-~l~~~ 305 (411)
+...+.|+|.|.+..+ .++++.=..=.+.+...-++++-.++ ++|++.-.|+.. . +++.+
T Consensus 42 k~~e~gGaDlii~ynsGrfR~~G~~slag~lpygnaN~iv~e~~~evlp~v~----~iPV~Agv~~~DP~~~~g~~Le~l 117 (286)
T 2p10_A 42 KSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGNANQIVVDMAREVLPVVR----HTPVLAGVNGTDPFMVMSTFLREL 117 (286)
T ss_dssp HHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEEHHHHHHHHHHHHGGGCS----SSCEEEEECTTCTTCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEeccchhhhcCccchhhhccccCHHHHHHHHHHhhhccCC----CCCEEEEECCcCCCcCHHHHHHHH
Confidence 3445679999987753 22355444456777777788887776 579988899753 2 46889
Q ss_pred hcCCCcEE
Q 015201 306 KGTGVDVI 313 (411)
Q Consensus 306 ~e~g~d~l 313 (411)
++.|+.++
T Consensus 118 k~~Gf~Gv 125 (286)
T 2p10_A 118 KEIGFAGV 125 (286)
T ss_dssp HHHTCCEE
T ss_pred HHhCCceE
Confidence 99998887
No 314
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=41.43 E-value=1.9e+02 Score=26.35 Aligned_cols=92 Identities=13% Similarity=0.071 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCC---cE-EEcCCCCCHHHHHHHh--CCCeeEEccCCcCc
Q 015201 270 WSEPYIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGV---DV-IGLDWTVDMADGRKRL--GNDISVQGNVDPAC 342 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~---d~-l~~d~~~di~~~~~~~--g~~~~l~G~vd~~~ 342 (411)
.-.+.+++.++.+++. +.|+++|+-.... .++.+.+.+. .+ +|+. .-+...+++.+ |=.+.+-| .
T Consensus 124 ~Q~~~f~~ql~lA~~~--~lPv~iH~r~a~~~~~~il~~~~~~~~~~i~H~f-~g~~~~~~~~l~~g~yi~~~g-~---- 195 (301)
T 2xio_A 124 TQLKYFEKQFELSEQT--KLPMFLHCRNSHAEFLDITKRNRDRCVGGVVHSF-DGTKEAAAALIDLDLYIGFNG-C---- 195 (301)
T ss_dssp HHHHHHHHTHHHHHHH--CCCEEEEEESCHHHHHHHHHHTGGGSSCEEETTC-CCCHHHHHHHHHTTCEEEECG-G----
T ss_pred HHHHHHHHHHHHHHHh--CCcEEEEecCchHHHHHHHHhccCCCCcEEEEcc-CCCHHHHHHHHhcCcEEEEcc-c----
Confidence 3447778888888887 7999999865544 4677777652 33 3432 23666666654 32233333 2
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
.+.+.+ .+++++.....++++.|++..
T Consensus 196 ~~~~~~-----~~~~~~~~p~drlLleTD~P~ 222 (301)
T 2xio_A 196 SLKTEA-----NLEVLKSIPSEKLMIETDAPW 222 (301)
T ss_dssp GSSSHH-----HHHHHHTSCGGGEEECCCTTS
T ss_pred ccCChH-----HHHHHHhCChHHEEEecCCCc
Confidence 123332 235666554479999999854
No 315
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=41.43 E-value=17 Score=34.50 Aligned_cols=122 Identities=19% Similarity=0.183 Sum_probs=65.0
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-CCCC----HHHHHHHHHHHHHHHHHHHHhhCCCCCEE
Q 015201 218 MCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-GQLP----PHMWEQWSEPYIREIVSLVRTKCPETPIV 292 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~~iS----p~~f~ef~~Py~k~i~~~i~~~~~g~~~~ 292 (411)
.+|.+||.+.++.+ +.|+|.+.++=... |... |+ ..+=...+++|-+.+ ++|++
T Consensus 150 ~~yTdPeea~~Fv~--------------~TgvD~LAvaiGt~HG~Yk~~~~p~--~~L~~~~L~~I~~~~-----~vpLV 208 (323)
T 2isw_A 150 VQLTEPQDAKKFVE--------------LTGVDALAVAIGTSHGAYKFKSESD--IRLAIDRVKTISDLT-----GIPLV 208 (323)
T ss_dssp CCCCCHHHHHHHHH--------------HHCCSEEEECSSCCSSSBCCCC------CCCCHHHHHHHHHH-----CSCEE
T ss_pred cccCCHHHHHHHHH--------------HHCCCEEEEecCccccccCCCCCcc--cccCHHHHHHHHHHh-----CCCeE
Confidence 46899998887776 45889765542211 2222 22 012222334443333 58999
Q ss_pred EEecC---------------------Cc-c-cHhHHhcCCCcEEEcCCCCC---HHHHHHHhCCCeeEEccCCcCc-cCC
Q 015201 293 LYING---------------------NG-G-FLERMKGTGVDVIGLDWTVD---MADGRKRLGNDISVQGNVDPAC-LFS 345 (411)
Q Consensus 293 ~H~CG---------------------~~-~-~l~~~~e~g~d~l~~d~~~d---i~~~~~~~g~~~~l~G~vd~~~-L~g 345 (411)
+|-.- .. . .|...++.|+.-+|++...- ...+++.+..+- ..+||.. +..
T Consensus 209 lHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~---~~~dpr~~l~~ 285 (323)
T 2isw_A 209 MHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHP---EKFDPRDYLGP 285 (323)
T ss_dssp ECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCT---TCCCTHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhcc---ccCChHHHHHH
Confidence 99533 11 1 24445567777777764211 122333332111 2467754 333
Q ss_pred CHHHHHHHHHHHHHHhCC
Q 015201 346 PLPALTDEIQRVVKCAGS 363 (411)
Q Consensus 346 t~eeV~~ev~~~i~~~~~ 363 (411)
..+.+.+.+++.++.++.
T Consensus 286 ~~~a~~~~v~~~~~~~gs 303 (323)
T 2isw_A 286 GRDAITEMLIPKIKAFGS 303 (323)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhCC
Confidence 457788888888888864
No 316
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=41.18 E-value=73 Score=30.79 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=39.3
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
++.++++|+|.|.+ +...+ .| + ...++++.+++..|++|+++..+........+.+.|+|.+.+
T Consensus 158 a~~~~~~G~d~i~i-~~~~g--~~----~----~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 158 VEELVKAHVDILVI-DSAHG--HS----T----RIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHTTCSEEEE-CCSCC--SS----H----HHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHCCCCEEEE-eCCCC--Ch----H----HHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEE
Confidence 44566899999876 21111 23 2 233455666666556787764333333467788899999976
No 317
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=40.97 E-value=2e+02 Score=25.98 Aligned_cols=64 Identities=11% Similarity=0.145 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC-CCCCCHH----HHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW-GGQLPPH----MWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL 302 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~-~~~iSp~----~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l 302 (411)
+.+.+.++.+.+.|+..+.+++-+ .++=.|+ ..-+.+..++++.++.++++ + +-++..|+...+
T Consensus 51 ~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vr~~~iG~~~~l 119 (249)
T 1f75_A 51 QTVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLPGDFLNTFLPELIEK--N--VKVETIGFIDDL 119 (249)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEC------------CGGGTHHHHHHHHHHHHHHHT--T--CEEEEESCGGGS
T ss_pred HHHHHHHHHHHHcCCCEEEEEEecccccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEeCChhhC
Confidence 445556667778899999888732 1211111 11134455666666667765 4 467788987644
No 318
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=40.91 E-value=78 Score=29.50 Aligned_cols=58 Identities=22% Similarity=0.350 Sum_probs=39.5
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
++..+++|+|+|.+ |. ++|++.++. ++.+.. . +.+-..|+++ .+..+.++|+|.+++.
T Consensus 222 ~~eAl~aGaD~I~L-Dn----~~~~~l~~a--------v~~i~~---~--v~ieaSGGI~~~~i~~~a~tGVD~isvG 281 (298)
T 3gnn_A 222 LRTALAHGARSVLL-DN----FTLDMMRDA--------VRVTEG---R--AVLEVSGGVNFDTVRAIAETGVDRISIG 281 (298)
T ss_dssp HHHHHHTTCEEEEE-ES----CCHHHHHHH--------HHHHTT---S--EEEEEESSCSTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHcCCCEEEE-CC----CCHHHHHHH--------HHHhCC---C--CeEEEEcCCCHHHHHHHHHcCCCEEEEC
Confidence 45556789998854 44 677665554 333321 2 5566778776 5999999999999874
No 319
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=40.88 E-value=1.9e+02 Score=25.61 Aligned_cols=98 Identities=8% Similarity=0.107 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-cH-hHHhcCCCc
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-FL-ERMKGTGVD 311 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~l-~~~~e~g~d 311 (411)
.+.+.+.++...+.|++.+.+.-....--+.+.| +.+...++++.+.++++ |+.+.+|...+.. .+ ..+.+.+-.
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~-~~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~l~~~~~~~ 177 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPESSSPDY-SELVRVTQDLLTHAANH--GQAVHLETGQESADHLLEFIEDVNRP 177 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHH-HHHHHHHHHHHHHHHTT--TCEEEEECCSSCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHH-HHHHHHHHHHHHHHHHc--CCEEEEecCCCCHHHHHHHHHhcCCC
Confidence 3455566667778899998775321110144555 55678899999999987 7888999986543 33 444445433
Q ss_pred E--EEcC------C-CCCHHHHHHHhCCCeeE
Q 015201 312 V--IGLD------W-TVDMADGRKRLGNDISV 334 (411)
Q Consensus 312 ~--l~~d------~-~~di~~~~~~~g~~~~l 334 (411)
. +.+| . ..|+.+.-+++++++..
T Consensus 178 ~~g~~~D~~h~~~~g~~d~~~~l~~~~~~i~~ 209 (290)
T 3tva_A 178 NLGINFDPANMILYGTGNPIEALRKVARYVRS 209 (290)
T ss_dssp TEEEEECHHHHHHTTCSCHHHHHHHHGGGEEE
T ss_pred CEEEEeccHHHHHhCCCCHHHHHHHHHhhheE
Confidence 2 3333 2 36888888888876544
No 320
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=40.27 E-value=85 Score=29.05 Aligned_cols=66 Identities=23% Similarity=0.211 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDV 312 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~ 312 (411)
+-.++-++++.++|||.|++- +.-+++..++| .+.+ .+|+++..-|... ..+.+.++|+..
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~e----~~~~~~~~~~i--------~~~~-----~~P~ii~~~g~~~~~~~~eL~~lGv~~ 230 (287)
T 3b8i_A 168 DAVIQRTLAYQEAGADGICLV----GVRDFAHLEAI--------AEHL-----HIPLMLVTYGNPQLRDDARLARLGVRV 230 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE----CCCSHHHHHHH--------HTTC-----CSCEEEECTTCGGGCCHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHcCCCEEEec----CCCCHHHHHHH--------HHhC-----CCCEEEeCCCCCCCCCHHHHHHcCCcE
Confidence 445677889999999999663 23456665443 3333 4687733224444 379999999999
Q ss_pred EEcCC
Q 015201 313 IGLDW 317 (411)
Q Consensus 313 l~~d~ 317 (411)
+++..
T Consensus 231 v~~~~ 235 (287)
T 3b8i_A 231 VVNGH 235 (287)
T ss_dssp EECCC
T ss_pred EEECh
Confidence 88754
No 321
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=40.05 E-value=51 Score=34.85 Aligned_cols=50 Identities=12% Similarity=0.175 Sum_probs=34.4
Q ss_pred HHHHHHHhCCCEEEEecCCC-----------C-CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEec
Q 015201 240 YIIYQVESGAHCIQIFDSWG-----------G-QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~-----------~-~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~C 296 (411)
+++.+.+.|.+.|.+-|.|- . ..+|+. +|- ++.+++.+|++ |..+.++..
T Consensus 355 ~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~k-----FP~Glk~lv~~ih~~--Glk~GlW~~ 417 (732)
T 2xn2_A 355 IVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKK-----FPNGLGHFADYVHEQ--GLKFGLWFE 417 (732)
T ss_dssp HHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTT-----CTTCHHHHHHHHHHT--TCEEEEEEC
T ss_pred HHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchh-----cCccHHHHHHHHHHc--CCEEEEEeC
Confidence 34445778999988866663 2 234433 365 89999999998 677777765
No 322
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=39.61 E-value=1.1e+02 Score=28.51 Aligned_cols=66 Identities=20% Similarity=0.219 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-c-CCcc--cHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-N-GNGG--FLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-C-G~~~--~l~~~~e~g~ 310 (411)
+..++.++++.++|||.|++. . .-+++.. +++.+.+ .+|++.-. . |... ..+.+.++|+
T Consensus 167 ~~ai~ra~ay~eAGAd~i~~e-~---~~~~~~~--------~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G~ 229 (295)
T 1xg4_A 167 DAAIERAQAYVEAGAEMLFPE-A---ITELAMY--------RQFADAV-----QVPILANITEFGATPLFTTDELRSAHV 229 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEET-T---CCSHHHH--------HHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEe-C---CCCHHHH--------HHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcCC
Confidence 556677889999999999652 2 2244444 4445555 35764322 2 3333 3789999999
Q ss_pred cEEEcCC
Q 015201 311 DVIGLDW 317 (411)
Q Consensus 311 d~l~~d~ 317 (411)
+.+++..
T Consensus 230 ~~v~~~~ 236 (295)
T 1xg4_A 230 AMALYPL 236 (295)
T ss_dssp SEEEESS
T ss_pred CEEEECh
Confidence 9988754
No 323
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=39.43 E-value=54 Score=30.94 Aligned_cols=59 Identities=25% Similarity=0.284 Sum_probs=39.3
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
-++..+++|+|+|.+ |. ++|++.++. ++.++. . +.+-..|+++ .+..+.++|+|++++.
T Consensus 243 ea~eAl~aGaD~I~L-Dn----~~~~~l~~a--------v~~l~~---~--v~ieaSGGIt~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 243 ELEEAISAGADIIML-DN----FSLEMMREA--------VKINAG---R--AALENSGNITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHTTCSEEEE-ES----CCHHHHHHH--------HHHHTT---S--SEEEEESSCCHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHcCCCEEEE-CC----CCHHHHHHH--------HHHhCC---C--CeEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 344556789999855 44 567555443 444432 3 3455677776 5899999999999875
No 324
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=39.09 E-value=1.7e+02 Score=27.80 Aligned_cols=99 Identities=14% Similarity=0.149 Sum_probs=58.2
Q ss_pred HHHHHHHHHhhCCCCCEEEEecC--Ccc--cHhHHhcC-CCc---EE--EcCCC-CCHHHHHHHh--CCCeeEEcc-CCc
Q 015201 275 IREIVSLVRTKCPETPIVLYING--NGG--FLERMKGT-GVD---VI--GLDWT-VDMADGRKRL--GNDISVQGN-VDP 340 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG--~~~--~l~~~~e~-g~d---~l--~~d~~-~di~~~~~~~--g~~~~l~G~-vd~ 340 (411)
++..++..++. .|+|+++|+.+ ... .++.+.+. |++ ++ +++.. .|...+++.+ |-.+.|-|. .+.
T Consensus 181 f~aq~~~A~~~-~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~ 259 (365)
T 3rhg_A 181 LRAAALAQNNN-PYASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDI 259 (365)
T ss_dssp HHHHHHHHTTC-TTCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCC
T ss_pred HHHHHHHHHHh-cCCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCccc
Confidence 34445555554 26899999734 333 46778776 765 22 55533 5777777653 655555542 111
Q ss_pred Cc----cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 341 AC----LFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 341 ~~----L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
.. +..+.++-.+.++++++.+....++|++++.-
T Consensus 260 tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~ 297 (365)
T 3rhg_A 260 SFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFL 297 (365)
T ss_dssp BCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred cccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 11 01244455667888888765478999999854
No 325
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=38.91 E-value=53 Score=31.53 Aligned_cols=69 Identities=20% Similarity=0.134 Sum_probs=44.1
Q ss_pred HHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 322 ADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 322 ~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
.++.+.++++..-++.|++. .+++..+|++++++..|=.|+.+.+... ......+.+..+.+++.++|.
T Consensus 137 ~~~~~~~P~Rf~g~a~v~~~----~~~~a~~EL~r~~~~~G~~Gv~l~~~~~-g~~l~d~~~~pi~~~~~e~g~ 205 (373)
T 4inf_A 137 ADACQKYPDRFIGMGTVAPQ----DPEWSAREIHRGARELGFKGIQINSHTQ-GRYLDEEFFDPIFRALVEVDQ 205 (373)
T ss_dssp HHHHHHSTTTEEECBCCCTT----SHHHHHHHHHHHHHTSCCCCEEECSCBT-TBCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHhCCCEEEEEEecCCC----CHHHHHHHHHHHHhhcCceEEEECCCCC-CCCCCCcchHHHHHHHHHcCC
Confidence 34455667777777778773 4666777888888775545666665421 112233467888888888863
No 326
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=38.68 E-value=2e+02 Score=26.22 Aligned_cols=94 Identities=14% Similarity=0.080 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCC-CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CCc-c--cHhHHh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQL-PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GNG-G--FLERMK 306 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~i-Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~~-~--~l~~~~ 306 (411)
+-.++.++...++|+|++.+.-+.-.-. |. +=+.-|++.+.+ + .|++++.. |.. . .+..+.
T Consensus 75 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~~----~~l~~~f~~va~---~----lPiilYn~P~~tg~~l~~~~~~~La 143 (283)
T 2pcq_A 75 PQAEGALLEAKAAGAMALLATPPRYYHGSLG----AGLLRYYEALAE---K----MPLFLYHVPQNTKVDLPLEAVEALA 143 (283)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCTTGGGTT----THHHHHHHHHHH---H----SCEEEEECHHHHCCCCCHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcCCCCCCH----HHHHHHHHHHhc---C----CCEEEEeCccccCcCCCHHHHHHHh
Confidence 4456677778889999997765543222 33 445667888887 2 47777664 432 2 234454
Q ss_pred cCCCcEEEc-CCCCCHHHHHHH--hCCCeeEEccCCc
Q 015201 307 GTGVDVIGL-DWTVDMADGRKR--LGNDISVQGNVDP 340 (411)
Q Consensus 307 e~g~d~l~~-d~~~di~~~~~~--~g~~~~l~G~vd~ 340 (411)
+. -+++.+ +..-|+....+. .+++..+..|-|.
T Consensus 144 ~~-pnivgiKdssgd~~~~~~~~~~~~~f~v~~G~d~ 179 (283)
T 2pcq_A 144 PH-PNVLGIKDSSGDLSRIAFYQARLQEFRVYTGHAP 179 (283)
T ss_dssp TS-TTEEEEEECSCCHHHHHHHHHHCSSCEEEECCGG
T ss_pred cC-CCEEEEEECCCCHHHHHHHHhcCCCEEEEECcHH
Confidence 54 355555 333455443322 4556655555554
No 327
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=37.65 E-value=2.7e+02 Score=26.30 Aligned_cols=85 Identities=11% Similarity=0.175 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCC----CCCCHHH------HH---HHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 231 SHLTQAIADYIIYQVESGAHCIQIFDSWG----GQLPPHM------WE---QWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 231 ~~~~d~~~~~~~~~~e~G~d~i~i~D~~~----~~iSp~~------f~---ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
+.+.+...+.++...++|.|+|.++-.-+ .|+||.. |- |-=.-+..++++.+++..|.-++.+-..+
T Consensus 148 ~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~ 227 (358)
T 4a3u_A 148 PRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSP 227 (358)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEecc
Confidence 33444455566777899999999876433 1444421 10 11122345555555554433345555443
Q ss_pred C------cc------c---HhHHhcCCCcEEEc
Q 015201 298 N------GG------F---LERMKGTGVDVIGL 315 (411)
Q Consensus 298 ~------~~------~---l~~~~e~g~d~l~~ 315 (411)
. .. . ...+.+.|++.+++
T Consensus 228 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (358)
T 4a3u_A 228 NGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGM 260 (358)
T ss_dssp SSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEE
T ss_pred CcccCCCcccchHHHHHHHHHhhhccCcccccc
Confidence 2 10 0 13345678888865
No 328
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=37.62 E-value=59 Score=29.43 Aligned_cols=111 Identities=10% Similarity=0.082 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEE-EEecCCcc-cHhHHhcCCCc---EEEcCCCCCHHHHHHHh--CCCeeEEccCCcCc
Q 015201 270 WSEPYIREIVSLVRTKCPETPIV-LYINGNGG-FLERMKGTGVD---VIGLDWTVDMADGRKRL--GNDISVQGNVDPAC 342 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~-~H~CG~~~-~l~~~~e~g~d---~l~~d~~~di~~~~~~~--g~~~~l~G~vd~~~ 342 (411)
.=...+++.++.+++. +.|++ +|+-.... .++.+.+.+.. ++++ +.-+...+++.+ |=.+.|.|.+
T Consensus 101 ~Q~~~F~~ql~lA~e~--~lPviSiH~r~a~~~~~~il~~~~~~~~~v~H~-fsG~~e~a~~~l~~G~yis~~g~~---- 173 (254)
T 3gg7_A 101 QQFAVFQHILRRCEDH--GGRILSIHSRRAESEVLNCLEANPRSGTPILHW-YSGSVTELRRAISLGCWFSVGPTM---- 173 (254)
T ss_dssp HHHHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHCGGGEEEEEET-CCSCHHHHHHHHHTTCEEEECHHH----
T ss_pred HHHHHHHHHHHHHHHc--CCCEEEEEcCCcHHHHHHHHHHcCCCCcEEEEe-CCCCHHHHHHHHcCCcEEEECccc----
Confidence 3345677777777776 78998 99987765 56777776432 4553 223566666654 3223333322
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCC--C--CcHHHHHHHHHHHHhc
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLV--G--TPEEAVAHFFEVGKSM 393 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~--~--tp~Eni~a~~~a~~~y 393 (411)
+ ..+ ..+++++.....++++.|++...+ + --|.++...++.+.+.
T Consensus 174 ~--~~~----~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA~~ 222 (254)
T 3gg7_A 174 V--RTQ----KGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSKI 222 (254)
T ss_dssp H--TSH----HHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHHHH
T ss_pred C--chH----HHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHHHH
Confidence 2 222 345666666547899999985431 1 1245566666555443
No 329
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=37.59 E-value=64 Score=30.82 Aligned_cols=76 Identities=22% Similarity=0.210 Sum_probs=48.5
Q ss_pred HHHHHHHHhCCCEEEEecCC---------CC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcC
Q 015201 239 DYIIYQVESGAHCIQIFDSW---------GG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGT 308 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~---------~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~ 308 (411)
+.++.+++.|++.+-++-+. +. .++++. ++++++.++++ |.++.+|..|.. -+....+.
T Consensus 179 ~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~--------l~~~~~~A~~~--g~~v~~H~~~~~-~i~~al~~ 247 (426)
T 2r8c_A 179 RAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDE--------IRAIVAEAQGR--GTYVLAHAYTPA-AIARAVRC 247 (426)
T ss_dssp HHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHH--------HHHHHHHHHHT--TCCEEEEECSHH-HHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHH--------HHHHHHHHHHc--CCEEEEEeCChH-HHHHHHHc
Confidence 33445566789888766431 11 567765 45678889887 789999998543 35666778
Q ss_pred CCcEEEcCCCCCHHHHH
Q 015201 309 GVDVIGLDWTVDMADGR 325 (411)
Q Consensus 309 g~d~l~~d~~~di~~~~ 325 (411)
|++.+.--...+-..++
T Consensus 248 G~~~i~H~~~~~~~~~~ 264 (426)
T 2r8c_A 248 GVRTIEHGNLIDDETAR 264 (426)
T ss_dssp TCSEEEECTTCCHHHHH
T ss_pred CCCEEecCCcCCHHHHH
Confidence 99887422334444433
No 330
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=37.59 E-value=1.5e+02 Score=27.51 Aligned_cols=58 Identities=16% Similarity=0.261 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~ 315 (411)
+.++.+.+.|+|+|.+.-. .| .++++.+++. +++++ +.+..........+.|+|.+.+
T Consensus 87 ~~~~~~~~~g~d~V~~~~g-----~p-----------~~~~~~l~~~--gi~vi-~~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 87 EYRAAIIEAGIRVVETAGN-----DP-----------GEHIAEFRRH--GVKVI-HKCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHHTTCCEEEEEES-----CC-----------HHHHHHHHHT--TCEEE-EEESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhcCCCEEEEcCC-----Cc-----------HHHHHHHHHc--CCCEE-eeCCCHHHHHHHHHcCCCEEEE
Confidence 3455667889999987532 12 2445667766 56655 5565544455567789999865
No 331
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=37.44 E-value=2.1e+02 Score=25.09 Aligned_cols=83 Identities=17% Similarity=0.114 Sum_probs=47.0
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC-
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW- 317 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~- 317 (411)
+.++..+++|||++... -.+ ..+++..++. |.+.+. -|.+..-+....+.|+|.+.+-.
T Consensus 80 d~~~~A~~aGAd~v~~p-----~~d------------~~v~~~ar~~--g~~~i~-Gv~t~~e~~~A~~~Gad~vk~Fpa 139 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTP-----GLN------------PKIVKLCQDL--NFPITP-GVNNPMAIEIALEMGISAVKFFPA 139 (224)
T ss_dssp HHHHHHHHHTCSEEECS-----SCC------------HHHHHHHHHT--TCCEEC-EECSHHHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHCCCCEEEEC-----CCC------------HHHHHHHHHh--CCCEEe-ccCCHHHHHHHHHCCCCEEEEeeC
Confidence 55667788999998321 122 3456677765 555544 24333335555678999886522
Q ss_pred -CC-CH---HHHHHHhC-CCeeEEccCCcC
Q 015201 318 -TV-DM---ADGRKRLG-NDISVQGNVDPA 341 (411)
Q Consensus 318 -~~-di---~~~~~~~g-~~~~l~G~vd~~ 341 (411)
.. .+ +++++.++ -.++-.|||++.
T Consensus 140 ~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~ 169 (224)
T 1vhc_A 140 EASGGVKMIKALLGPYAQLQIMPTGGIGLH 169 (224)
T ss_dssp TTTTHHHHHHHHHTTTTTCEEEEBSSCCTT
T ss_pred ccccCHHHHHHHHhhCCCCeEEEECCcCHH
Confidence 12 23 34444453 234557888774
No 332
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=36.84 E-value=13 Score=35.04 Aligned_cols=61 Identities=15% Similarity=0.137 Sum_probs=32.8
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec
Q 015201 218 MCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN 296 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C 296 (411)
.+|.+||.+.++.+. .|+|.+.++=... |...|+---++=. ++++.+++.. .+|+++|-.
T Consensus 150 ~~yT~Peea~~Fv~~--------------TgvD~LAvaiGt~HG~Yk~~g~p~L~~----~~L~~I~~~~-~vpLVlHGg 210 (305)
T 1rvg_A 150 ALLTNPEEARIFMER--------------TGADYLAVAIGTSHGAYKGKGRPFIDH----ARLERIARLV-PAPLVLHGA 210 (305)
T ss_dssp TTCCCHHHHHHHHHH--------------HCCSEEEECSSCCSSSBCSSSSCCCCH----HHHHHHHHHC-CSCEEECSC
T ss_pred cccCCHHHHHHHHHH--------------HCCCEEEEecCccccccCCCCCCccCH----HHHHHHHHhc-CCCEEEeCC
Confidence 368999988877664 4889765542211 2222100001111 2344555554 489999975
Q ss_pred C
Q 015201 297 G 297 (411)
Q Consensus 297 G 297 (411)
-
T Consensus 211 S 211 (305)
T 1rvg_A 211 S 211 (305)
T ss_dssp C
T ss_pred C
Confidence 5
No 333
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=36.45 E-value=1.7e+02 Score=25.75 Aligned_cols=121 Identities=17% Similarity=0.138 Sum_probs=63.3
Q ss_pred HHHHHHHHhCCCEEEEecC--CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEE-
Q 015201 239 DYIIYQVESGAHCIQIFDS--WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVI- 313 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~--~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l- 313 (411)
+|++.+.++|+|++.++.. ... ...+.++.+++. |..+.+-..-.+. .++.+.+ ++|.+
T Consensus 76 ~~i~~~~~aGadgv~vh~e~~~~~-------------~~~~~~~~i~~~--g~~~gv~~~p~t~~e~~~~~~~-~~D~v~ 139 (230)
T 1tqj_A 76 KYVEDFAKAGADIISVHVEHNASP-------------HLHRTLCQIREL--GKKAGAVLNPSTPLDFLEYVLP-VCDLIL 139 (230)
T ss_dssp GTHHHHHHHTCSEEEEECSTTTCT-------------THHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGG-GCSEEE
T ss_pred HHHHHHHHcCCCEEEECcccccch-------------hHHHHHHHHHHc--CCcEEEEEeCCCcHHHHHHHHh-cCCEEE
Confidence 4667788899999988865 321 123556777776 5544443322222 3444443 56655
Q ss_pred --EcCCC-----C------CHHHHHHHh-----CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 314 --GLDWT-----V------DMADGRKRL-----GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 314 --~~d~~-----~------di~~~~~~~-----g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
++... . -+.++++.. .-.+.+.|||++. +. .++++.+ ..++|.++.--=.
T Consensus 140 ~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~----~~-------~~~~~aG-ad~vvvGSai~~a 207 (230)
T 1tqj_A 140 IMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPN----NT-------WQVLEAG-ANAIVAGSAVFNA 207 (230)
T ss_dssp EESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTT----TT-------HHHHHHT-CCEEEESHHHHTS
T ss_pred EEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHH----HH-------HHHHHcC-CCEEEECHHHHCC
Confidence 22211 1 145566655 3457778998873 22 3333333 3467776541112
Q ss_pred CCCcHHHHHHHHH
Q 015201 376 VGTPEEAVAHFFE 388 (411)
Q Consensus 376 ~~tp~Eni~a~~~ 388 (411)
++ |.++++.+.+
T Consensus 208 ~d-~~~~~~~l~~ 219 (230)
T 1tqj_A 208 PN-YAEAIAGVRN 219 (230)
T ss_dssp SC-HHHHHHHHHT
T ss_pred CC-HHHHHHHHHH
Confidence 22 4566666543
No 334
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=36.34 E-value=50 Score=29.59 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=48.7
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC-
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW- 317 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~- 317 (411)
+.++..+++|+++|. ||. ...++++.++++ |++++- -|...+-+..-.+.|+|.+-+-.
T Consensus 97 ~~a~~Ai~AGA~fIv---------sP~--------~~~~vi~~~~~~--gi~~ip-Gv~TptEi~~A~~~Gad~vK~FPa 156 (232)
T 4e38_A 97 EQALAAKEAGATFVV---------SPG--------FNPNTVRACQEI--GIDIVP-GVNNPSTVEAALEMGLTTLKFFPA 156 (232)
T ss_dssp HHHHHHHHHTCSEEE---------CSS--------CCHHHHHHHHHH--TCEEEC-EECSHHHHHHHHHTTCCEEEECST
T ss_pred HHHHHHHHcCCCEEE---------eCC--------CCHHHHHHHHHc--CCCEEc-CCCCHHHHHHHHHcCCCEEEECcC
Confidence 456677899999873 332 134566778877 665432 34433345556788999986522
Q ss_pred -CC-CHHHHHHH---hCC-CeeEEccCCc
Q 015201 318 -TV-DMADGRKR---LGN-DISVQGNVDP 340 (411)
Q Consensus 318 -~~-di~~~~~~---~g~-~~~l~G~vd~ 340 (411)
.. .+..+|.. +++ +++-.|||++
T Consensus 157 ~~~gG~~~lkal~~p~p~ip~~ptGGI~~ 185 (232)
T 4e38_A 157 EASGGISMVKSLVGPYGDIRLMPTGGITP 185 (232)
T ss_dssp TTTTHHHHHHHHHTTCTTCEEEEBSSCCT
T ss_pred ccccCHHHHHHHHHHhcCCCeeeEcCCCH
Confidence 22 34445444 432 3445688876
No 335
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=36.21 E-value=1.1e+02 Score=26.98 Aligned_cols=92 Identities=10% Similarity=0.006 Sum_probs=49.6
Q ss_pred HhHHhcCCCcEEEcC--CCCCHHHHHHHh---CCCeeEEc----cCCcC--ccC---CCHHHHHHHHHHHHHHhCC---C
Q 015201 302 LERMKGTGVDVIGLD--WTVDMADGRKRL---GNDISVQG----NVDPA--CLF---SPLPALTDEIQRVVKCAGS---R 364 (411)
Q Consensus 302 l~~~~e~g~d~l~~d--~~~di~~~~~~~---g~~~~l~G----~vd~~--~L~---gt~eeV~~ev~~~i~~~~~---~ 364 (411)
++.+.+.|++.+.+. ...++.++++.+ |=+++... ++... .+. ...++..+..++.|+.+.. .
T Consensus 29 l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~ 108 (269)
T 3ngf_A 29 FRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCR 108 (269)
T ss_dssp HHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCC
Confidence 466778999999753 234677766554 42232221 11111 011 2345566777788876642 4
Q ss_pred CeEEeCCCCCCCCCc--------HHHHHHHHHHHHhcCC
Q 015201 365 GHILNLGHGVLVGTP--------EEAVAHFFEVGKSMKY 395 (411)
Q Consensus 365 gfIls~gc~i~~~tp--------~Eni~a~~~a~~~yg~ 395 (411)
.+++.+| .+.+.+ .++++.+.+.++++|-
T Consensus 109 ~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv 145 (269)
T 3ngf_A 109 TLHAMSG--ITEGLDRKACEETFIENFRYAADKLAPHGI 145 (269)
T ss_dssp EEECCBC--BCTTSCHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred EEEEccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4555566 454443 2445555666677763
No 336
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=36.07 E-value=2.4e+02 Score=25.31 Aligned_cols=68 Identities=12% Similarity=0.221 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC-CCCCCH----HHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH-hHHh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW-GGQLPP----HMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL-ERMK 306 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~-~~~iSp----~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l-~~~~ 306 (411)
+.+.+.++.+.+.|+..+.+++-+ .++=-| +..-+.+..++++.++.++++ + +-++..|+...+ +.+.
T Consensus 46 ~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vrl~~iG~~~~lp~~~~ 119 (245)
T 2d2r_A 46 KTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDN--N--IRFRAIGDLEGFSKELR 119 (245)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECC----------CHHHHHHHHHHHHHHHHHHHHHT--T--CEEEEESCGGGSCHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEecChhhCCHHHH
Confidence 455566667788999999888732 222222 334456777777777778776 4 456778987644 3343
No 337
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=35.94 E-value=1.1e+02 Score=28.51 Aligned_cols=68 Identities=15% Similarity=0.162 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-cccHhHHhcCCCcEE
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-GGFLERMKGTGVDVI 313 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~~~l~~~~e~g~d~l 313 (411)
+-.++-++++.++|||.|++- . +.-++++.++ +.+.++. .+|+++..-.. ..-.+.+.++|+..+
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e-~--~~~~~~~~~~--------i~~~~~~---~~P~i~~~~~~~~~~~~eL~~lGv~~v 235 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMH-S--KKADPSDIEA--------FMKAWNN---QGPVVIVPTKYYKTPTDHFRDMGVSMV 235 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC-C--CSSSSHHHHH--------HHHHHTT---CSCEEECCSTTTTSCHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEc-C--CCCCHHHHHH--------HHHHcCC---CCCEEEeCCCCCCCCHHHHHHcCCcEE
Confidence 556677889999999998662 1 2234666544 4555542 26776442211 113677778888877
Q ss_pred EcC
Q 015201 314 GLD 316 (411)
Q Consensus 314 ~~d 316 (411)
++.
T Consensus 236 ~~~ 238 (295)
T 1s2w_A 236 IWA 238 (295)
T ss_dssp EEC
T ss_pred EEC
Confidence 664
No 338
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=35.94 E-value=2.6e+02 Score=25.72 Aligned_cols=137 Identities=10% Similarity=0.022 Sum_probs=64.4
Q ss_pred HHhCCCEEEEecCC-CCCCCHHHHH----HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC--
Q 015201 245 VESGAHCIQIFDSW-GGQLPPHMWE----QWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW-- 317 (411)
Q Consensus 245 ~e~G~d~i~i~D~~-~~~iSp~~f~----ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~-- 317 (411)
.+.|..+++-..=+ +.--||.-|+ +-.++.++++. ++. |+|++- .-=+...++.+.++ +|++.+..
T Consensus 45 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~---~e~--Glp~~t-ev~d~~~v~~l~~~-vd~lkIgA~~ 117 (288)
T 3tml_A 45 EKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVK---RQL--GLPVLT-DVHSIDEIEQVASV-VDVLQTPAFL 117 (288)
T ss_dssp HHHTCCEEEECBC--------------CHHHHHHHHHHHH---HHH--CCCEEE-ECCSGGGHHHHHHH-CSEEEECGGG
T ss_pred HHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHH---Hhc--CCeEEE-EeCCHHHHHHHHHh-CCEEEECccc
Confidence 34577776422111 1345666676 34444444444 455 677542 11223357888888 89987743
Q ss_pred CCCHHHHHHH--hCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC-----CCeEEeCCCCC--CCCCcHHHHHHHHH
Q 015201 318 TVDMADGRKR--LGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS-----RGHILNLGHGV--LVGTPEEAVAHFFE 388 (411)
Q Consensus 318 ~~di~~~~~~--~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~-----~gfIls~gc~i--~~~tp~Eni~a~~~ 388 (411)
..+..-+++. .+..+.+--| +..|++|+...+..+.+.+.. ..+||. -|++ +++...-|++++-.
T Consensus 118 ~~n~~LLr~~a~~gkPVilK~G-----~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~-erg~~y~~~~~~vdl~~i~~ 191 (288)
T 3tml_A 118 CRQTDFIHACARSGKPVNIKKG-----QFLAPHDMKNVIDKARDAAREAGLSEDRFMAC-ERGVSFGYNNLVSDMRSLAI 191 (288)
T ss_dssp TTCHHHHHHHHTSSSCEEEECC-----TTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEE-ECCEECSSSCEECCHHHHHH
T ss_pred ccCHHHHHHHHccCCcEEEeCC-----CCCCHHHHHHHHHHHHHcCCCccCCCCcEEEE-eCCCCCCCCcCcCCHHHHHH
Confidence 3355544442 2211111110 225899999999988886531 345553 2444 32221125666544
Q ss_pred HHHhcCC
Q 015201 389 VGKSMKY 395 (411)
Q Consensus 389 a~~~yg~ 395 (411)
.++++.
T Consensus 192 -lk~~~~ 197 (288)
T 3tml_A 192 -MRETNA 197 (288)
T ss_dssp -GGGGSS
T ss_pred -HHhcCC
Confidence 345653
No 339
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=35.73 E-value=27 Score=32.84 Aligned_cols=115 Identities=19% Similarity=0.201 Sum_probs=59.6
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCC-C--------CCCHHHHHHHHHHHHHHHHHHHHhhCCC
Q 015201 218 MCHTAPHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWG-G--------QLPPHMWEQWSEPYIREIVSLVRTKCPE 288 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~-~--------~iSp~~f~ef~~Py~k~i~~~i~~~~~g 288 (411)
.+|.+||.+.++.+ +.|+|.+.++=... | -+.++.- ++| ++. ++
T Consensus 152 ~~yT~Peea~~Fv~--------------~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L--------~~I----~~~-~~ 204 (307)
T 3n9r_A 152 AVLVNPKEAEQFVK--------------ESQVDYLAPAIGTSHGAFKFKGEPKLDFERL--------QEV----KRL-TN 204 (307)
T ss_dssp CCSCCHHHHHHHHH--------------HHCCSEEEECSSCCSSSBCCSSSCCCCHHHH--------HHH----HHH-HC
T ss_pred ccCCCHHHHHHHHH--------------HHCCCEEEEecCCcccccCCCCCCccCHHHH--------HHH----Hhc-CC
Confidence 47899998888766 35899876542211 2 3444443 333 222 16
Q ss_pred CCEEEEecCCc----------------------c-cHhHHhcCCCcEEEcCCCCC---HHHHHHHhCCCeeEEccCCcCc
Q 015201 289 TPIVLYINGNG----------------------G-FLERMKGTGVDVIGLDWTVD---MADGRKRLGNDISVQGNVDPAC 342 (411)
Q Consensus 289 ~~~~~H~CG~~----------------------~-~l~~~~e~g~d~l~~d~~~d---i~~~~~~~g~~~~l~G~vd~~~ 342 (411)
+|+++|-.-.+ . .|...+++|+.-+|++...- ...+++.+..+- ...||..
T Consensus 205 ~PLVlHGgS~vp~~~~~~~~~~gg~~~~~~G~p~e~i~~ai~~GV~KiNi~Tdl~~a~~~~vr~~~~~~~---~~~dpr~ 281 (307)
T 3n9r_A 205 IPLVLHGASAIPDNVRKSYLDAGGDLKGSKGVPFEFLQESVKGGINKVNTDTDLRIAFIAEVRKVANEDK---SQFDLRK 281 (307)
T ss_dssp SCEEESSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCT---TCCCHHH
T ss_pred CCeEEeCCCCcchHHHHHHHHhcCccCCCCCCCHHHHHHHHHcCceEEEechHHHHHHHHHHHHHHHhCC---CcCCHHH
Confidence 89999974311 1 24444456666666653211 112233332110 2345543
Q ss_pred -cCCCHHHHHHHHHHHHHHhC
Q 015201 343 -LFSPLPALTDEIQRVVKCAG 362 (411)
Q Consensus 343 -L~gt~eeV~~ev~~~i~~~~ 362 (411)
+....+.+.+.+++.++.++
T Consensus 282 ~~~~~~~a~~~~v~~~~~~~g 302 (307)
T 3n9r_A 282 FFSPAQLALKNVVKERMKLLG 302 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 23345667777777777665
No 340
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=35.67 E-value=66 Score=29.76 Aligned_cols=63 Identities=21% Similarity=0.259 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
+-++..+++|+|+|.+ |. ++|++.++. ++.+++.++.++ +-.-|.++ .+..+.++|+|++++.
T Consensus 204 eea~eA~~aGaD~I~L-Dn----~~~e~l~~a--------v~~l~~~~~~v~--ieASGGIt~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 204 EDALRAVEAGADIVML-DN----LSPEEVKDI--------SRRIKDINPNVI--VEVSGGITEENVSLYDFETVDVISSS 268 (285)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHHH--------HHHHHHHCTTSE--EEEEECCCTTTGGGGCCTTCCEEEEG
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHHH--------HHHhhccCCCce--EEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 3445556789998844 44 788766554 334444222333 33456654 6999999999999874
No 341
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=34.86 E-value=81 Score=29.22 Aligned_cols=11 Identities=0% Similarity=-0.378 Sum_probs=6.2
Q ss_pred EEEecccHHHH
Q 015201 189 VLGFVGAPWTI 199 (411)
Q Consensus 189 v~~~~~gPft~ 199 (411)
++..+.||...
T Consensus 92 ~v~~i~G~a~~ 102 (287)
T 3tqv_A 92 RIFELKGNVRS 102 (287)
T ss_dssp EEEEEEEEHHH
T ss_pred EEEEEEEcHHH
Confidence 34556677543
No 342
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=34.61 E-value=2.4e+02 Score=26.58 Aligned_cols=72 Identities=22% Similarity=0.314 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhCCCEEEEec----------CCCC-CC-CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCc---
Q 015201 236 AIADYIIYQVESGAHCIQIFD----------SWGG-QL-PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNG--- 299 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D----------~~~~-~i-Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~--- 299 (411)
...+.++...++|+|+|-+.- .+|+ ++ .| ....++++.+++.. ++|+.+=+. |..
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~--------~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~ 141 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDL--------ARVREILKAMGEAV-RVPVTVKMRLGLEGKE 141 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCH--------HHHHHHHHHHHHHC-SSCEEEEEESCBTTCC
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCH--------HHHHHHHHHHHHHh-CCceEEEEecCcCccc
Confidence 334455666788999987653 1233 22 22 23445556666554 678776321 211
Q ss_pred ---c---cHhHHhcCCCcEEEcC
Q 015201 300 ---G---FLERMKGTGVDVIGLD 316 (411)
Q Consensus 300 ---~---~l~~~~e~g~d~l~~d 316 (411)
. +...+.+.|+|.+.+.
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cHHHHHHHHHHHHHcCCCEEEEe
Confidence 1 2356778999999764
No 343
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=34.20 E-value=1e+02 Score=28.51 Aligned_cols=68 Identities=18% Similarity=0.117 Sum_probs=45.4
Q ss_pred HHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 322 ADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 322 ~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
.++.+.+++++.-.+.++|. .+++..+++++++ ..+-.|+.+++... ......+.+..+++.+.++|.
T Consensus 105 ~~~~~~~p~r~~~~~~l~~~----~~~~a~~el~~~~-~~g~~Gv~l~~~~~-~~~l~d~~~~p~~~~~~e~~l 172 (334)
T 2hbv_A 105 LEFAAHNPQRIKVLAQVPLQ----DLDLACKEASRAV-AAGHLGIQIGNHLG-DKDLDDATLEAFLTHCANEDI 172 (334)
T ss_dssp HHHHTTCTTTEEECBCCCTT----SHHHHHHHHHHHH-HHTCCCEEEESCBT-TBCTTSHHHHHHHHHHHHTTC
T ss_pred HHHHhhCCCeEEEEEecCcc----CHHHHHHHHHHHH-HcCCeEEEECCCCC-CCCCCcHHHHHHHHHHHHCCC
Confidence 34445566677667788874 5667778888888 44446777776421 122334779999999999874
No 344
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=33.74 E-value=1.9e+02 Score=26.55 Aligned_cols=140 Identities=19% Similarity=0.161 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhCCCEEEEe--cCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-c-----cHhHHhc
Q 015201 237 IADYIIYQVESGAHCIQIF--DSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-G-----FLERMKG 307 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~--D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~-----~l~~~~e 307 (411)
+++-+....++||-.+.+. |+-+. -.+|+.|+|+ ++.+++.+++. ++.-+.|.. . .+..+ +
T Consensus 36 ia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~--------~~~IR~~~pd~-ii~~TTg~~~~~~~eeR~~~~-~ 105 (282)
T 2y7e_A 36 QAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEA--------ISAIREVVPEI-IIQISTGGAVGESFDKRLAPL-A 105 (282)
T ss_dssp HHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHH--------HHHHHHHCTTS-EEEECSSCSTTCCHHHHHGGG-G
T ss_pred HHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHH--------HHHHHHHCCCe-EEEeCCCCCCCCCHHHHHHHh-h
Confidence 3444556789999998877 43332 5799988774 56777776675 444455443 1 12223 3
Q ss_pred CCCcEEEcCC----------CCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC--C----CCeEEeCC
Q 015201 308 TGVDVIGLDW----------TVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG--S----RGHILNLG 371 (411)
Q Consensus 308 ~g~d~l~~d~----------~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~--~----~gfIls~g 371 (411)
+..+..+++- ..+...+.+.+. .+---|+-|..-..+...++. ++++++.+- + -.|+|+..
T Consensus 106 ~~Pe~asl~~gs~Nf~~~v~~n~~~~~~~~~~--~~~e~Gv~pE~e~fd~g~l~~-~~~l~~~Gl~p~~p~~~~~VlGv~ 182 (282)
T 2y7e_A 106 LKPEMATLNAGTLNFGDDIFINHPADIIRLAE--AFKQYNVVPEVEVYESGMVDA-VARLIKKGIITQNPLHIQFVLGVP 182 (282)
T ss_dssp GCCSEEEEECCCEEETTEEECCCHHHHHHHHH--HHHHTTCEEEEEECSHHHHHH-HHHHHHTTSCCCSSCEEEEEECCT
T ss_pred cCCCEEEecccccccccccccCCHHHHHHHHH--HHHHcCCeEEEEEECHHHHHH-HHHHHHcCCCCCCCeEEEEEEecC
Confidence 4445543321 122333333221 111234445432235666655 456666532 1 14666654
Q ss_pred CCCCCCCcHHHHHHHHHHHH
Q 015201 372 HGVLVGTPEEAVAHFFEVGK 391 (411)
Q Consensus 372 c~i~~~tp~Eni~a~~~a~~ 391 (411)
.+.| ..++++.+|++..-
T Consensus 183 ~g~~--~~~~~L~~~~~~lp 200 (282)
T 2y7e_A 183 GGMS--GKPKNLMYMMEHLK 200 (282)
T ss_dssp TSCC--CCHHHHHHHHHHHH
T ss_pred CCCC--CCHHHHHHHHHhcc
Confidence 4544 56899999998754
No 345
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=33.65 E-value=3.3e+02 Score=26.47 Aligned_cols=123 Identities=9% Similarity=0.088 Sum_probs=60.8
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC---CCCEEEEecCC-cc--cHhHHhcCCCcEEEcC-CCCC
Q 015201 248 GAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCP---ETPIVLYINGN-GG--FLERMKGTGVDVIGLD-WTVD 320 (411)
Q Consensus 248 G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~---g~~~~~H~CG~-~~--~l~~~~e~g~d~l~~d-~~~d 320 (411)
+++.|.+.+...++++++.+ .++++.+++..+ +..+.+-+.++ .+ .++.+++.|++.+++. +..|
T Consensus 104 ~i~~i~fgGGtpt~l~~~~l--------~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~ 175 (457)
T 1olt_A 104 HVSQLHWGGGTPTYLNKAQI--------SRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFN 175 (457)
T ss_dssp CEEEEEEEESCGGGSCHHHH--------HHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCC
T ss_pred ceEEEEEeCCCcccCCHHHH--------HHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCC
Confidence 45667777755557787654 445566665321 11233333333 22 4788999999988763 1223
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
-..++ .++.. .|.+++.+.++.+-+.+-. .+-+..=.++|.. ..|.+...++.+.+.+
T Consensus 176 ~~~l~-~i~R~-------------~~~~~~~~ai~~~r~~G~~-~v~~dlI~GlPge-t~e~~~~tl~~~~~l~ 233 (457)
T 1olt_A 176 KEVQR-LVNRE-------------QDEEFIFALLNHAREIGFT-STNIDLIYGLPKQ-TPESFAFTLKRVAELN 233 (457)
T ss_dssp HHHHH-HHTCC-------------CCHHHHHHHHHHHHHTTCC-SCEEEEEESCTTC-CHHHHHHHHHHHHHHC
T ss_pred HHHHH-HhCCC-------------CCHHHHHHHHHHHHHcCCC-cEEEEEEcCCCCC-CHHHHHHHHHHHHhcC
Confidence 33333 33321 2455565555555443111 0101111234433 3556666666666654
No 346
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=33.59 E-value=2e+02 Score=26.08 Aligned_cols=64 Identities=9% Similarity=0.132 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC-CCCCHH----HHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG-GQLPPH----MWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL 302 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp~----~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l 302 (411)
+.+.+.++.+.+.|+..+.+++-+. ++=.|+ ..-+.+..++++.++.+++. + +-++..|+...+
T Consensus 48 ~~l~~iv~~c~~~GI~~lTlYaFStENwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vrlr~iG~~~~l 116 (253)
T 3qas_B 48 KSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH--N--VRLRIIGDTSRF 116 (253)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCC-----------------CTHHHHHHHHHHHT--T--CEEEEESCCTTS
T ss_pred HHHHHHHHHHHHCCCCEEEEEEecCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHC--C--eEEEEeCChHhC
Confidence 4555666677889999998876322 221121 11233445666666667765 4 456777987644
No 347
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=33.43 E-value=2.7e+02 Score=25.04 Aligned_cols=98 Identities=11% Similarity=-0.031 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEec--CCCCC---C-CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC----c----c
Q 015201 235 QAIADYIIYQVESGAHCIQIFD--SWGGQ---L-PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN----G----G 300 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D--~~~~~---i-Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~----~----~ 300 (411)
+.+.+.++...+.|++.+...- +++.. . +.+...+.+...++++.+.++++ |+.+.+|..+. . .
T Consensus 107 ~~~~~~i~~A~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~~~ 184 (309)
T 2hk0_A 107 AFFERTLSNVAKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDL--GINLCIEVLNRFENHVLNTAA 184 (309)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT--TCEEEEECCCTTTCSSCCSHH
T ss_pred HHHHHHHHHHHHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHc--CCEEEEeecccccccccCCHH
Confidence 4455566677788999886431 12322 2 66677788899999999999887 78889998742 1 1
Q ss_pred cH-hHHhcCCCcE--EEcC------CCCCHHHHHHHhCCCeeE
Q 015201 301 FL-ERMKGTGVDV--IGLD------WTVDMADGRKRLGNDISV 334 (411)
Q Consensus 301 ~l-~~~~e~g~d~--l~~d------~~~di~~~~~~~g~~~~l 334 (411)
.+ ..+.+.+-+. +.+| ...|+.+.-+++++++..
T Consensus 185 ~~~~l~~~v~~~~vg~~~D~~H~~~~g~d~~~~l~~~~~~i~~ 227 (309)
T 2hk0_A 185 EGVAFVKDVGKNNVKVMLDTFHMNIEEDSFGDAIRTAGPLLGH 227 (309)
T ss_dssp HHHHHHHHHTCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEE
T ss_pred HHHHHHHHcCCCCeEEEEehhhHhhcCcCHHHHHHHHHhhEEE
Confidence 12 3333444332 3333 134777777777766543
No 348
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=33.38 E-value=1.7e+02 Score=29.22 Aligned_cols=48 Identities=10% Similarity=-0.038 Sum_probs=28.8
Q ss_pred CHHHHHHHH---HHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEE
Q 015201 263 PPHMWEQWS---EPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVI 313 (411)
Q Consensus 263 Sp~~f~ef~---~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l 313 (411)
|++.+..|. ..|++++++.+.+. |.++++ +.+.+. .+.++.+.|+-++
T Consensus 247 s~~~l~~~~~~E~~~l~~~le~I~~~--g~~vvi-~~~~I~~~al~~L~~~~I~av 299 (513)
T 3iyg_B 247 STAKVAEIEHAEKEKMKEKVERILKH--GINCFI-NRQLIYNYPEQLFGAAGVMAI 299 (513)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEE-EcCCccHHHHHHHHHcCceEE
Confidence 555555443 56777888888877 555443 444444 2566666665555
No 349
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=33.29 E-value=1.1e+02 Score=28.75 Aligned_cols=59 Identities=24% Similarity=0.373 Sum_probs=40.9
Q ss_pred HhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCccc-H-hH--HhcCCCcEEE
Q 015201 246 ESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGF-L-ER--MKGTGVDVIG 314 (411)
Q Consensus 246 e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~-l-~~--~~e~g~d~l~ 314 (411)
++|++.|.+.|..|. +.|+...+ +++.+++.. ++|+-+|...+... + .. -.+.|++.+.
T Consensus 154 ~~G~~~i~l~Dt~G~-~~P~~~~~--------lv~~l~~~~-~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd 216 (320)
T 3dxi_A 154 DKIADLFCMVDSFGG-ITPKEVKN--------LLKEVRKYT-HVPVGFHGHDNLQLGLINSITAIDDGIDFID 216 (320)
T ss_dssp TTTCSEEEEECTTSC-CCHHHHHH--------HHHHHHHHC-CSCEEEECBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred hCCCCEEEECcccCC-CCHHHHHH--------HHHHHHHhC-CCeEEEEeCCCCccHHHHHHHHHHhCCCEEE
Confidence 679999999887775 57877555 445555554 47899998877652 3 22 3467999984
No 350
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=32.91 E-value=1.6e+02 Score=27.18 Aligned_cols=79 Identities=11% Similarity=-0.018 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCC--CCCCHHHH--HHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcC--C
Q 015201 238 ADYIIYQVESGAHCIQIFDSWG--GQLPPHMW--EQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGT--G 309 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~--~~iSp~~f--~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~--g 309 (411)
.+-++++.++|+|.|.+.-++. ++|.-+.- .+-...+.+++++.+++..|++.++.|.-|-.+ ...++.+. |
T Consensus 173 ~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~G 252 (286)
T 2p10_A 173 PEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQG 252 (286)
T ss_dssp HHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCCC
Confidence 4456777899999997766542 23322200 133446788999999998766544444433233 46777776 8
Q ss_pred CcEEEcC
Q 015201 310 VDVIGLD 316 (411)
Q Consensus 310 ~d~l~~d 316 (411)
++++-..
T Consensus 253 ~~G~~gA 259 (286)
T 2p10_A 253 CHGFYGA 259 (286)
T ss_dssp CCEEEES
T ss_pred ccEEEee
Confidence 8988543
No 351
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=32.81 E-value=3.5e+02 Score=26.18 Aligned_cols=143 Identities=10% Similarity=0.030 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-c---C----Ccc--
Q 015201 231 SHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-N---G----NGG-- 300 (411)
Q Consensus 231 ~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-C---G----~~~-- 300 (411)
+.+.++..+.++.+++.|+|.+. ++. +.+...-+ -+++.+++. ++|+++-. + | ...
T Consensus 135 eel~~~~~eqi~~L~~~GvDlll-~ET---i~~~~Eak--------aa~~a~~~~--~lPv~iS~T~~~~G~l~G~~~~~ 200 (406)
T 1lt8_A 135 TEVKKVFLQQLEVFMKKNVDFLI-AEY---FEHVEEAV--------WAVETLIAS--GKPVAATMAIGPEGDLHGVPPGE 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEE-ECC---CSCHHHHH--------HHHHHHGGG--TSCEEEEECCBTTBCTTCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCEEE-Ecc---cCCHHHHH--------HHHHHHHHh--CCcEEEEEEECCCCCcCCCcHHH
Confidence 44556666777788899999984 444 33443332 224555554 57876544 3 2 111
Q ss_pred cHhHHhcCCCcEEEcCCCCCH-------HHHHHHh-----CCCeeEEccC----C--cC-cc-------CCCHH-----H
Q 015201 301 FLERMKGTGVDVIGLDWTVDM-------ADGRKRL-----GNDISVQGNV----D--PA-CL-------FSPLP-----A 349 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~d~~~di-------~~~~~~~-----g~~~~l~G~v----d--~~-~L-------~gt~e-----e 349 (411)
.+..+.+.|++++.+.-.... ..+++.. +..+.+.-|- | +. .. ..+|+ +
T Consensus 201 ~~~~l~~~~~~avGvNC~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 280 (406)
T 1lt8_A 201 AAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWD 280 (406)
T ss_dssp HHHHHHTTTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHH
T ss_pred HHHHhhcCCCCEEEecCCCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHH
Confidence 234556778888765322222 2333332 2223332221 1 01 00 13344 4
Q ss_pred HHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 350 LTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 350 V~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
+.+.+++..+.+ --|++ ||. +|.|+.|+++.++++.+.
T Consensus 281 ~~~~a~~w~~~G---a~iIG-GCC---GTtPeHI~aia~~l~~~~ 318 (406)
T 1lt8_A 281 IQKYAREAYNLG---VRYIG-GCC---GFEPYHIRAIAEELAPER 318 (406)
T ss_dssp HHHHHHHHHHHT---EEEEC-CCT---TCCHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHhCC---CeEEE-Eec---CCCHHHHHHHHHHHhccC
Confidence 677777655543 33454 443 477999999999998774
No 352
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=32.63 E-value=1.4e+02 Score=27.11 Aligned_cols=103 Identities=8% Similarity=0.000 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCc-c-cHhHHhcCC-CcEE--EcCCCC--------C-H----HHHHHH--hC
Q 015201 270 WSEPYIREIVSLVRTKCPETPIVLYINGNG-G-FLERMKGTG-VDVI--GLDWTV--------D-M----ADGRKR--LG 329 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~-~l~~~~e~g-~d~l--~~d~~~--------d-i----~~~~~~--~g 329 (411)
.-.|.+.++++.+.+. |.|+.+|+-... . ..+.+.+.+ +.++ |+.... + . ..+.+. .+
T Consensus 119 ~~~~~~~~~~~~~~~~--glpv~ih~~~~~l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la~~~ 196 (303)
T 4do7_A 119 VDDADFARGVAWLQAN--DYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELAALP 196 (303)
T ss_dssp HHCHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHHTST
T ss_pred ccCHHHHHHHHHHHHC--CCeEEEecCHHHHHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHHhCC
Confidence 4456677778888777 688888875442 2 235555664 5554 332210 1 1 112221 22
Q ss_pred CCeeE-EccCCcCcc------CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCC
Q 015201 330 NDISV-QGNVDPACL------FSPLPALTDEIQRVVKCAGSRGHILNLGHGVL 375 (411)
Q Consensus 330 ~~~~l-~G~vd~~~L------~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~ 375 (411)
++-+ ..++..... ..+.++++..++.+++..|..+++++++.-..
T Consensus 197 -nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~ 248 (303)
T 4do7_A 197 -HVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVC 248 (303)
T ss_dssp -TEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGG
T ss_pred -CEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCC
Confidence 2222 111111100 12366788889999999988899999986543
No 353
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=32.63 E-value=3.2e+02 Score=27.23 Aligned_cols=143 Identities=17% Similarity=0.106 Sum_probs=77.2
Q ss_pred HHHHHHHHhCCCEEEEecCCC---CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc---c-cHhHHhcCCCc
Q 015201 239 DYIIYQVESGAHCIQIFDSWG---GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG---G-FLERMKGTGVD 311 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~---~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~---~-~l~~~~e~g~d 311 (411)
+.++.+.+.+.+.+.+.|..+ |+++.+...+..... ...++..+...+. -..|.. . .++.+.+.|+|
T Consensus 197 eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p-----~a~~D~~~rl~V~-aavg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 197 EAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFP-----NSAKDKQGRLLVG-AAVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp HHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCT-----TCCBCTTSCBCCE-EEECSSTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcc-----cchhhhccceeee-eeeeeccchHHHHHHHHhhccc
Confidence 344455677888888888655 588887766543210 0111111112222 223322 1 36778899999
Q ss_pred EEEcCCCC--------CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC--------C
Q 015201 312 VIGLDWTV--------DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGV--------L 375 (411)
Q Consensus 312 ~l~~d~~~--------di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i--------~ 375 (411)
++.++... -+.++++.+++..++.|++. |.|+ ++++++.+. .+++++.|.+- .
T Consensus 271 ~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~------t~e~----a~~~~~aGa-d~i~vg~g~gsi~~~~~~~g 339 (511)
T 3usb_A 271 AIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA------TAEA----TKALIEAGA-NVVKVGIGPGSICTTRVVAG 339 (511)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC------SHHH----HHHHHHHTC-SEEEECSSCSTTCCHHHHHC
T ss_pred eEEecccccchhhhhhHHHHHHHhCCCceEEeeeec------cHHH----HHHHHHhCC-CEEEECCCCccccccccccC
Confidence 99875322 36777888876566677764 4544 455555433 35555433221 1
Q ss_pred CCCc-HHHHHHHHHHHHhcCCCCC
Q 015201 376 VGTP-EEAVAHFFEVGKSMKYDNS 398 (411)
Q Consensus 376 ~~tp-~Eni~a~~~a~~~yg~~~~ 398 (411)
.+.| .+.+..+.+++++++.+-+
T Consensus 340 ~g~p~~~~l~~v~~~~~~~~iPVI 363 (511)
T 3usb_A 340 VGVPQLTAVYDCATEARKHGIPVI 363 (511)
T ss_dssp CCCCHHHHHHHHHHHHHTTTCCEE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcEE
Confidence 1122 3445556666777654433
No 354
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=32.53 E-value=2.6e+02 Score=24.68 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=51.1
Q ss_pred cHhHHhcCCCcEEEcCC---CCCHHHHHHHhCCC-eeEEc-cCC-cCccC-CCHH---HHHHHHHHHHHHhC---CCCeE
Q 015201 301 FLERMKGTGVDVIGLDW---TVDMADGRKRLGND-ISVQG-NVD-PACLF-SPLP---ALTDEIQRVVKCAG---SRGHI 367 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~d~---~~di~~~~~~~g~~-~~l~G-~vd-~~~L~-gt~e---eV~~ev~~~i~~~~---~~gfI 367 (411)
.++.+.++|++.+.+.. ..++.++++.+.+. +.+.+ +.. +..+. .+++ +..+..++.|+.+. ...++
T Consensus 43 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~ 122 (287)
T 3kws_A 43 KLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVI 122 (287)
T ss_dssp HHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 36778889999986532 24677777766532 33321 111 11222 3342 34456666666554 24556
Q ss_pred EeCCCCCCC-CC--c-------HHHHHHHHHHHHhcCCC
Q 015201 368 LNLGHGVLV-GT--P-------EEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 368 ls~gc~i~~-~t--p-------~Eni~a~~~a~~~yg~~ 396 (411)
+.+|.+-.. .. . .+++..+.+.++++|-.
T Consensus 123 ~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~ 161 (287)
T 3kws_A 123 IVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTS 161 (287)
T ss_dssp ECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCE
Confidence 666643221 12 2 45666677777777743
No 355
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=32.47 E-value=90 Score=29.21 Aligned_cols=82 Identities=11% Similarity=0.172 Sum_probs=51.4
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC-
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW- 317 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~- 317 (411)
+.++...++|+|+|.+... .| .++++.+++. +.+++ +.+........+.+.|+|.+.++.
T Consensus 79 ~~~~~a~~~g~d~V~~~~g-----~p-----------~~~i~~l~~~--g~~v~-~~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAG-----NP-----------SKYMERFHEA--GIIVI-PVVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHHHHTTCSEEEECSS-----CG-----------GGTHHHHHHT--TCEEE-EEESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHCCCCEEEECCC-----Ch-----------HHHHHHHHHc--CCeEE-EEeCCHHHHHHHHHcCCCEEEEECC
Confidence 4566677899999987543 12 2356667765 56655 455544456677788999987632
Q ss_pred --------CCC---HHHHHHHhCCCeeEEccCC
Q 015201 318 --------TVD---MADGRKRLGNDISVQGNVD 339 (411)
Q Consensus 318 --------~~d---i~~~~~~~g~~~~l~G~vd 339 (411)
..+ +.++++..+-.+...|||.
T Consensus 140 ~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~ 172 (332)
T 2z6i_A 140 EAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA 172 (332)
T ss_dssp TSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC
T ss_pred CCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC
Confidence 112 3445555554567778886
No 356
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=32.32 E-value=33 Score=32.24 Aligned_cols=39 Identities=15% Similarity=0.147 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCC--CcEEEc
Q 015201 275 IREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTG--VDVIGL 315 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g--~d~l~~ 315 (411)
+.++++.+++. |..+.+.+.|... .++.+.+.| .+.+.+
T Consensus 159 l~~ll~~~~~~--g~~i~l~TNG~~~e~l~~L~~~g~~~~~l~i 200 (342)
T 2yx0_A 159 MGDLVEEFHKR--GFTTFIVTNGTIPERLEEMIKEDKLPTQLYV 200 (342)
T ss_dssp HHHHHHHHHHT--TCEEEEEECSCCHHHHHHHHHTTCCCSEEEE
T ss_pred HHHHHHHHHHC--CCcEEEEcCCCcHHHHHHHHhcCCCCCEEEE
Confidence 46677778776 5678888999875 578888876 777644
No 357
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=31.96 E-value=1.7e+02 Score=27.48 Aligned_cols=66 Identities=14% Similarity=0.080 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEE-ecCC-cc--cHhHHhcCCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLY-INGN-GG--FLERMKGTGV 310 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H-~CG~-~~--~l~~~~e~g~ 310 (411)
+-.++-++++.++|||.|++- ++-++++.++ +.+.+ .+|++.- +.+. .. -.+.+.++|+
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e----~~~~~e~~~~--------i~~~l-----~~P~lan~~~~g~~~~~~~~eL~~lGv 251 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVE----APANVDELKE--------VSAKT-----KGLRIANMIEGGKTPLHTPEEFKEMGF 251 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----CCCSHHHHHH--------HHHHS-----CSEEEEEECTTSSSCCCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEEc----CCCCHHHHHH--------HHHhc-----CCCEEEEeccCCCCCCCCHHHHHHcCC
Confidence 456777889999999999652 2345565544 44445 3576432 2232 23 2688888898
Q ss_pred cEEEcCC
Q 015201 311 DVIGLDW 317 (411)
Q Consensus 311 d~l~~d~ 317 (411)
..+++..
T Consensus 252 ~~v~~~~ 258 (318)
T 1zlp_A 252 HLIAHSL 258 (318)
T ss_dssp CEEEECS
T ss_pred eEEEEch
Confidence 8887643
No 358
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=31.83 E-value=5.7e+02 Score=28.38 Aligned_cols=142 Identities=16% Similarity=0.229 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHh--CCCEEEEecCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc----
Q 015201 234 TQAIADYIIYQVES--GAHCIQIFDSWGG--------QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG---- 299 (411)
Q Consensus 234 ~d~~~~~~~~~~e~--G~d~i~i~D~~~~--------~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~---- 299 (411)
++-.+++++.+.++ |..-+ +.|++ +++++.|+. ++.+++..++.++....-|..
T Consensus 554 ~~~kl~ia~~L~~~~~G~~~l---E~~Gga~~e~~~~~~~e~~~e~---------l~~l~~~~~~~~~~~l~R~~n~vgy 621 (1150)
T 3hbl_A 554 TKDMINIASKTADVFKDGFSL---EMWGGATFDVAYNFLKENPWER---------LERLRKAIPNVLFQMLLRASNAVGY 621 (1150)
T ss_dssp HHHHHHHHHHHHHHTTTCSEE---EEEETTHHHHHHHTSCCCHHHH---------HHHHHHHCCSSEEEEEEETTTBTCS
T ss_pred HHHHHHHHHHHHHhhCCCcEE---eecCCceEEecccccCCCHHHH---------HHHHHHhCCCCeEEEEecccccccc
Confidence 56777788888887 65544 33442 566666643 334444445667666665511
Q ss_pred --------c-cHhHHhcCCCcEEEc-CCCCC------HHHHHHHhCCCeeEEccCCcC-------cc-CCCHHHHHHHHH
Q 015201 300 --------G-FLERMKGTGVDVIGL-DWTVD------MADGRKRLGNDISVQGNVDPA-------CL-FSPLPALTDEIQ 355 (411)
Q Consensus 300 --------~-~l~~~~e~g~d~l~~-d~~~d------i~~~~~~~g~~~~l~G~vd~~-------~L-~gt~eeV~~ev~ 355 (411)
. .++...+.|+|++.+ +...| ..+..+..|.. ..+.+.+. .- .-|++.+.+.++
T Consensus 622 ~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~--~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~ 699 (1150)
T 3hbl_A 622 KNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKI--SEGTICYTGDILNPERSNIYTLEYYVKLAK 699 (1150)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCE--EEEEEECCSCTTCTTTCSSSSHHHHHHHHH
T ss_pred ccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhh--eeEEEeecccccChhhcCCCCHHHHHHHHH
Confidence 1 256667899999964 43333 22333445542 22333332 21 246777888777
Q ss_pred HHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 356 RVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 356 ~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
++.+.+ -.+++....+. -..|+.+..+++++++.
T Consensus 700 ~~~~~G---a~~i~l~Dt~G-~~~P~~~~~lv~~l~~~ 733 (1150)
T 3hbl_A 700 ELEREG---FHILAIKDMAG-LLKPKAAYELIGELKSA 733 (1150)
T ss_dssp HHHHTT---CSEEEEEETTC-CCCHHHHHHHHHHHHHH
T ss_pred HHHHcC---CCeeeEcCccC-CCCHHHHHHHHHHHHHh
Confidence 766653 33455443333 34566788888888764
No 359
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=31.28 E-value=1.5e+02 Score=27.00 Aligned_cols=57 Identities=25% Similarity=0.330 Sum_probs=36.8
Q ss_pred HHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 245 VESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 245 ~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
.++|+|+|.+ |. ++|+ +++++.+.+++..|+++ +-.-|.++ .+..+.+.|+|.+++.
T Consensus 199 ~~aGaD~I~l-d~----~~~~--------~l~~~v~~l~~~~~~~~--i~AsGGI~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 199 MNAGADIVMC-DN----LSVL--------ETKEIAAYRDAHYPFVL--LEASGNISLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHTCSEEEE-ET----CCHH--------HHHHHHHHHHHHCTTCE--EEEESSCCTTTHHHHHTTTCSEEECT
T ss_pred HHcCCCEEEE-CC----CCHH--------HHHHHHHHhhccCCCcE--EEEECCCCHHHHHHHHHcCCcEEEEc
Confidence 3579999865 43 4564 44455555554434454 33446554 6899999999999874
No 360
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=31.19 E-value=1.4e+02 Score=27.41 Aligned_cols=95 Identities=17% Similarity=0.151 Sum_probs=55.6
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec----CC-cc--cHhHHh-c
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQ-LPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN----GN-GG--FLERMK-G 307 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~-iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C----G~-~~--~l~~~~-e 307 (411)
.++.++...++|+|++.+.-+.-.- .|+ +-+.-|++++.+...+. ++|++++.. |. .. .+..+. +
T Consensus 87 ai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~p~~--~lPiilYn~P~~tg~~l~~~~~~~La~~ 160 (294)
T 3b4u_A 87 AADQSAEALNAGARNILLAPPSYFKNVSD----DGLFAWFSAVFSKIGKD--ARDILVYNIPSVTMVTLSVELVGRLKAA 160 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECCCCSSCSCCH----HHHHHHHHHHHHHHCTT--CCCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEcCCcCCCCCCH----HHHHHHHHHHHHhcCCC--CCcEEEEECcchhCcCCCHHHHHHHHHh
Confidence 3567777888999999876665433 344 45667888888876100 468888774 42 22 244555 5
Q ss_pred CCCc-EEEc-CCCCCHHHHH---HHhCCCeeEEccCC
Q 015201 308 TGVD-VIGL-DWTVDMADGR---KRLGNDISVQGNVD 339 (411)
Q Consensus 308 ~g~d-~l~~-d~~~di~~~~---~~~g~~~~l~G~vd 339 (411)
.+ + ++.+ +...|+.... +..+ +..+..|.|
T Consensus 161 ~p-n~ivgiKds~gd~~~~~~~~~~~~-~f~v~~G~d 195 (294)
T 3b4u_A 161 FP-GIVTGVKDSSGNWSHTERLLKEHG-DLAILIGDE 195 (294)
T ss_dssp CT-TTEEEEEECCCCHHHHHHHHHHHT-TSEEEECCH
T ss_pred CC-CcEEEEEECCCCHHHHHHHHHhCC-CeEEEEccH
Confidence 43 4 6655 4444655543 4444 454444444
No 361
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=31.05 E-value=2.5e+02 Score=24.03 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=44.0
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCCCEEEEecCCcccHhHHhcCCCcEEEcCCC-
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKC-PETPIVLYINGNGGFLERMKGTGVDVIGLDWT- 318 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~-~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~- 318 (411)
++..++.|++.+++-.. -++++.+.++ ++.+++.+ +...++++ ..++...+.|+|++++...
T Consensus 35 ~~~~~~~G~~~v~lr~~---~~~~~~~~~~--------~~~l~~~~~~~~~l~v~-----~~~~~a~~~gad~v~l~~~~ 98 (221)
T 1yad_A 35 IIITIQNEVDFIHIRER---SKSAADILKL--------LDLIFEGGIDKRKLVMN-----GRVDIALFSTIHRVQLPSGS 98 (221)
T ss_dssp HHHHHGGGCSEEEECCT---TSCHHHHHHH--------HHHHHHTTCCGGGEEEE-----SCHHHHHTTTCCEEEECTTS
T ss_pred HHHHHHCCCCEEEEccC---CCCHHHHHHH--------HHHHHHhcCcCCeEEEe-----ChHHHHHHcCCCEEEeCCCc
Confidence 44566889998866322 2566655443 33333321 00134443 3578888999999988654
Q ss_pred CCHHHHHHHhC
Q 015201 319 VDMADGRKRLG 329 (411)
Q Consensus 319 ~di~~~~~~~g 329 (411)
..+..+++.++
T Consensus 99 ~~~~~~~~~~~ 109 (221)
T 1yad_A 99 FSPKQIRARFP 109 (221)
T ss_dssp CCHHHHHHHCT
T ss_pred cCHHHHHHHCC
Confidence 46777877765
No 362
>1luc_B Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_B 1bsl_A 1xkj_A 3fgc_B*
Probab=30.93 E-value=23 Score=33.23 Aligned_cols=44 Identities=9% Similarity=0.198 Sum_probs=30.0
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHH
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVG 390 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~ 390 (411)
+.||||+|.+.+++..+..|-.+|++... ...+.+.....++..
T Consensus 272 ~vGtpe~v~~~l~~~~~~~G~d~~~l~~~----~~~~~~~~~~~~~~l 315 (324)
T 1luc_B 272 AIGTYEESTQAARVAIECCGAADLLMSFE----SMEDKAQQRAVIDVV 315 (324)
T ss_dssp EEESHHHHHHHHHHHHHHHTCSEEEEECT----TCCCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHhCCCEEEEEeC----CCCCHHHHHHHHHHH
Confidence 45999999999998888777668888643 122345454555444
No 363
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=30.86 E-value=1.3e+02 Score=29.16 Aligned_cols=85 Identities=24% Similarity=0.348 Sum_probs=55.2
Q ss_pred HHHhCCCEEEEecCCCC---------CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEe------cCC----cc---
Q 015201 244 QVESGAHCIQIFDSWGG---------QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYI------NGN----GG--- 300 (411)
Q Consensus 244 ~~e~G~d~i~i~D~~~~---------~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~------CG~----~~--- 300 (411)
+.++|.+.|.+-|.|.+ ..+|+-| |- ++.+++.+|++ |.+..+++ |+. ..
T Consensus 50 l~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kF-----P~Gl~~l~~~ih~~--Glk~Giw~~~g~~tC~~~pGs~~~~~ 122 (404)
T 3hg3_A 50 WKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRF-----PHGIRQLANYVHSK--GLKLGIYADVGNKTCAGFPGSFGYYD 122 (404)
T ss_dssp HHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTS-----TTHHHHHHHHHHHT--TCEEEEEEESSSBCTTSSBCCTTCHH
T ss_pred cHhhCCeEEEECCCcCCCCCCCCCCeeeChhhc-----CCCHHHHHHHHHHC--CCeeEEEecCCccccCCCCccHHHHH
Confidence 45789999988776642 3444433 54 88999999998 56666654 532 11
Q ss_pred -cHhHHhcCCCcEEEcCCCC--C----------HHHHHHHhCCCeeEE
Q 015201 301 -FLERMKGTGVDVIGLDWTV--D----------MADGRKRLGNDISVQ 335 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d~~~--d----------i~~~~~~~g~~~~l~ 335 (411)
....+++.|+|-+-+|.+. . +.++-++.|..+.+.
T Consensus 123 ~da~~fa~WGvDylK~D~C~~~~~~~~~~~y~~m~~AL~~tGRpi~~s 170 (404)
T 3hg3_A 123 IDAQTFADWGVDLLKFAGCYCDSLENLADGYKHMSLALNRTGRSIVYS 170 (404)
T ss_dssp HHHHHHHHHTCCEEEEECCSCSCHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHhCCcEEEecCcCCCcchhHHHHHHHHHHHHHhcCCCEEEE
Confidence 1466888999999877642 1 223444557666664
No 364
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=30.84 E-value=31 Score=30.29 Aligned_cols=28 Identities=0% Similarity=-0.092 Sum_probs=23.2
Q ss_pred cCCCHHHHHH-HHHHHHHHhCCCCeEEeC
Q 015201 343 LFSPLPALTD-EIQRVVKCAGSRGHILNL 370 (411)
Q Consensus 343 L~gt~eeV~~-ev~~~i~~~~~~gfIls~ 370 (411)
+.||||+|.+ .+++.++..|-..+++..
T Consensus 170 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~ 198 (228)
T 1nfp_A 170 AAGNFDTCLHHVAEMAQGLNNKVDFLFCF 198 (228)
T ss_dssp EEECHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 4599999999 999999987656788765
No 365
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=30.76 E-value=45 Score=29.63 Aligned_cols=81 Identities=11% Similarity=0.096 Sum_probs=46.3
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCC------CEEEEecCCcccHhHHhcCCCcEE
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPET------PIVLYINGNGGFLERMKGTGVDVI 313 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~------~~~~H~CG~~~~l~~~~e~g~d~l 313 (411)
-++..+++|+++|.. - -++| ++++..+++ ++ | ++=-|...+-+..-.+.|+|.+
T Consensus 77 ~a~~ai~AGA~fivs-P----~~~~------------evi~~~~~~--~v~~~~~~~-~~PG~~TptE~~~A~~~Gad~v 136 (217)
T 3lab_A 77 DFQKAIDAGAQFIVS-P----GLTP------------ELIEKAKQV--KLDGQWQGV-FLPGVATASEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHHTCSEEEE-S----SCCH------------HHHHHHHHH--HHHCSCCCE-EEEEECSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEEEe-C----CCcH------------HHHHHHHHc--CCCccCCCe-EeCCCCCHHHHHHHHHcCCCEE
Confidence 355778899998732 1 1333 445666665 44 4 3345544444666678999999
Q ss_pred EcCC--CC-CHHHHH---HHhCC-CeeEEccCCc
Q 015201 314 GLDW--TV-DMADGR---KRLGN-DISVQGNVDP 340 (411)
Q Consensus 314 ~~d~--~~-di~~~~---~~~g~-~~~l~G~vd~ 340 (411)
-+-. .. .+..+| .-+++ +++-.|||++
T Consensus 137 K~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~ 170 (217)
T 3lab_A 137 KCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISK 170 (217)
T ss_dssp EETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCT
T ss_pred EECccccccCHHHHHHHHhhhcCceEEEeCCCCH
Confidence 6532 22 234444 33443 3555688887
No 366
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=30.47 E-value=2.8e+02 Score=24.41 Aligned_cols=68 Identities=22% Similarity=0.243 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-c-cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-G-FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-~-~l~~~~e~g~d~l~~ 315 (411)
+.++.+ ++|+|.+.+--.-+.|+. . -.|..+ +++.+++.. +.|+..|.=-.. . +++.+.+.|+|.+.+
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvp-n--~t~G~~----~v~~lr~~~-~~~~dvhLmv~dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVP-N--LTLSPF----FVSQVKKLA-TKPLDCHLMVTRPQDYIAQLARAGADFITL 86 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSS-C--CCBCHH----HHHHHHTTC-CSCEEEEEESSCGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCc-c--chhcHH----HHHHHHhcc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 345566 889998654311122211 1 011222 344445443 456666664432 3 467777778777754
No 367
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=30.34 E-value=2.4e+02 Score=25.46 Aligned_cols=64 Identities=9% Similarity=0.142 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCC-CCCCH-H---HHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWG-GQLPP-H---MWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL 302 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~-~~iSp-~---~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l 302 (411)
+.+.+.++.+.+.|+..+.++.-+. ++=-| + ..-+++..++++..+.++++ + +-++..|+...+
T Consensus 48 ~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~--~--vrvr~iGd~~~L 116 (253)
T 3sgv_B 48 KSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH--N--VRLRIIGDTSRF 116 (253)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC-----------CHHHHHHHHTTHHHHHHHHHHT--T--CEEEEESCGGGS
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHHHHHHHHHHHHHHHHHHC--C--eEEEEEeehhhC
Confidence 4445566677889999988764211 11111 1 11234455566667777776 4 457788987744
No 368
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=30.22 E-value=1.8e+02 Score=25.67 Aligned_cols=81 Identities=12% Similarity=0.142 Sum_probs=45.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc---ccHhHHhcCCCcEEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG---GFLERMKGTGVDVIG 314 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~---~~l~~~~e~g~d~l~ 314 (411)
.+.++++++.|++.+.+-.. ++.. .+.++.+++..++.. ...|.. ..++...+.|.|.++
T Consensus 41 ~~~~~al~~gGv~~iel~~k-----~~~~---------~~~i~~l~~~~~~~~---igagtvl~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTLR-----SQHG---------LKAIQVLREQRPELC---VGAGTVLDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp HHHHHHHHHTTCCEEEEESS-----STHH---------HHHHHHHHHHCTTSE---EEEECCCSHHHHHHHHHHTCSSEE
T ss_pred HHHHHHHHHCCCCEEEEecC-----CccH---------HHHHHHHHHhCcccE---EeeCeEeeHHHHHHHHHCCCCEEE
Confidence 35677888999999988642 2222 122333333322322 222332 135667788999987
Q ss_pred cCC-CCCHHHHHHHhCCCeeEEc
Q 015201 315 LDW-TVDMADGRKRLGNDISVQG 336 (411)
Q Consensus 315 ~d~-~~di~~~~~~~g~~~~l~G 336 (411)
... ..++.++++.+|-.+ +.|
T Consensus 104 ~p~~d~~v~~~~~~~g~~~-i~G 125 (225)
T 1mxs_A 104 TPGITEDILEAGVDSEIPL-LPG 125 (225)
T ss_dssp CSSCCHHHHHHHHHCSSCE-ECE
T ss_pred eCCCCHHHHHHHHHhCCCE-EEe
Confidence 643 335666777787433 335
No 369
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=30.20 E-value=3.1e+02 Score=25.98 Aligned_cols=62 Identities=18% Similarity=0.082 Sum_probs=38.8
Q ss_pred HHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC---C------CC---HHHHHHHhCCCeeE--EccCC
Q 015201 277 EIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW---T------VD---MADGRKRLGNDISV--QGNVD 339 (411)
Q Consensus 277 ~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~---~------~d---i~~~~~~~g~~~~l--~G~vd 339 (411)
+.++.+++.. ++|+++-.+-.........+.|+|.+.+.. . .+ +.++++.+++++.+ .|||.
T Consensus 215 ~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~ 290 (370)
T 1gox_A 215 KDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR 290 (370)
T ss_dssp HHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC
T ss_pred HHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 5566776665 678887555443356778899999997632 1 12 55666766544443 46554
No 370
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=29.92 E-value=2.9e+02 Score=24.29 Aligned_cols=61 Identities=21% Similarity=0.270 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec---CC----cc----cHhH
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN---GN----GG----FLER 304 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C---G~----~~----~l~~ 304 (411)
...+.++++.++|+.+|.+. |++ .++.+++.. ++|++--.. |+ +. .++.
T Consensus 37 ~~~~~A~a~~~~Ga~~i~~~-------~~~------------~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~~~~i~~ 96 (229)
T 3q58_A 37 IVAAMAQAAASAGAVAVRIE-------GIE------------NLRTVRPHL-SVPIIGIIKRDLTGSPVRITPYLQDVDA 96 (229)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-------SHH------------HHHHHGGGC-CSCEEEECBCCCSSCCCCBSCSHHHHHH
T ss_pred hHHHHHHHHHHCCCcEEEEC-------CHH------------HHHHHHHhc-CCCEEEEEeecCCCCceEeCccHHHHHH
Confidence 34566778889999998762 222 245555554 677642111 11 11 2445
Q ss_pred HhcCCCcEEEcC
Q 015201 305 MKGTGVDVIGLD 316 (411)
Q Consensus 305 ~~e~g~d~l~~d 316 (411)
+.+.|+|++.++
T Consensus 97 ~~~aGad~I~l~ 108 (229)
T 3q58_A 97 LAQAGADIIAFD 108 (229)
T ss_dssp HHHHTCSEEEEE
T ss_pred HHHcCCCEEEEC
Confidence 667788888654
No 371
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=29.78 E-value=2.7e+02 Score=25.82 Aligned_cols=92 Identities=17% Similarity=0.104 Sum_probs=40.3
Q ss_pred CCCEEEEecCCC-----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe------------cCCcc-cHhHHhcCC
Q 015201 248 GAHCIQIFDSWG-----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI------------NGNGG-FLERMKGTG 309 (411)
Q Consensus 248 G~d~i~i~D~~~-----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~------------CG~~~-~l~~~~e~g 309 (411)
+-+.+.+.|.-| ..++++.+++ +++.+|+..++.|. ||... .++.+...+
T Consensus 70 p~k~Vl~pd~~a~C~~a~~~~~e~v~~------------~k~~~Pda~vV~y~n~saeVka~aD~v~TSsna~~~v~~~~ 137 (300)
T 1wzu_A 70 PDKVVLIPSREATCAMANMLKVEHILE------------AKRKYPNAPVVLYVNSTAEAKAYADVTVTSANAVEVVKKLD 137 (300)
T ss_dssp TTSEEECCC------------CHHHHH------------HHHHSTTSCEEEESSSCHHHHTTCSEEECTTTHHHHHHTCS
T ss_pred CCCEEECCCCCCCcccccCCCHHHHHH------------HHHHCCCCeEEEecCChHHHHHhCCEEEchHHHHHHHHhCC
Confidence 455565555333 2788888776 44456788888886 33333 345555554
Q ss_pred CcEEEcCCCCC-HHHHHHHhCCCeeEEc--cCCcCccCCCHHHHH
Q 015201 310 VDVIGLDWTVD-MADGRKRLGNDISVQG--NVDPACLFSPLPALT 351 (411)
Q Consensus 310 ~d~l~~d~~~d-i~~~~~~~g~~~~l~G--~vd~~~L~gt~eeV~ 351 (411)
-+-+-+..... ...+++..|.++.++- |..+..=.-|.|+|+
T Consensus 138 ~~~iif~pD~~Lg~~l~~~~~k~~i~~~~~g~C~vh~~~t~e~i~ 182 (300)
T 1wzu_A 138 SDVVIFGPDKNLAHYVAKMTGKKIIPVPSKGHCYVHQKFTLDDVE 182 (300)
T ss_dssp CSEEEEESCHHHHHHHHHHHCCEEEEC-----------CCHHHHH
T ss_pred CCeEEEECChhHHHHHHHHcCCeEEECCCCCcCCCcccCCHHHHH
Confidence 44333222112 2334444566555554 444432234565553
No 372
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=29.61 E-value=2.1e+02 Score=25.86 Aligned_cols=66 Identities=20% Similarity=0.209 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC---cc-c-HhHHhcCC
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN---GG-F-LERMKGTG 309 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~---~~-~-l~~~~e~g 309 (411)
+-.++-++++.++|||.|++ + +.-+++..++ +.+.+ .+|+.+. |+. +. . ++.+.++|
T Consensus 168 ~~ai~ra~a~~eAGAd~i~~-e---~~~~~~~~~~--------i~~~~-----~~P~n~~-~~~~~~~p~~~~~eL~~lG 229 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVYP-V---GLSTAEQVER--------LVDAV-----SVPVNIT-AHPVDGHGAGDLATLAGLG 229 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEE-C---CCCSHHHHHH--------HHTTC-----SSCBEEE-CBTTTBBTTBCHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCcEEEE-c---CCCCHHHHHH--------HHHhC-----CCCEEEE-ecCCCCCCCCCHHHHHHcC
Confidence 44556678899999999966 2 2334455433 34444 3576544 332 12 3 78899999
Q ss_pred CcEEEcCCC
Q 015201 310 VDVIGLDWT 318 (411)
Q Consensus 310 ~d~l~~d~~ 318 (411)
+..+++...
T Consensus 230 v~~v~~~~~ 238 (255)
T 2qiw_A 230 VRRVTFGPL 238 (255)
T ss_dssp CCEEECTTH
T ss_pred CCEEEEHHH
Confidence 999887543
No 373
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=29.60 E-value=2.9e+02 Score=24.27 Aligned_cols=60 Identities=18% Similarity=0.300 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec---CC----cc----cHhHH
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN---GN----GG----FLERM 305 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C---G~----~~----~l~~~ 305 (411)
..+.++++.++|+.+|.+. |+ +.++.+++.. ++|++--.. |+ +. .++..
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~-------~~------------~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~~~~i~~~ 97 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRIE-------GI------------DNLRMTRSLV-SVPIIGIIKRDLDESPVRITPFLDDVDAL 97 (232)
T ss_dssp HHHHHHHHHHTTCSEEEEE-------SH------------HHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCSHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEC-------CH------------HHHHHHHHhc-CCCEEEEEeecCCCcceEeCccHHHHHHH
Confidence 4466778889999998752 22 2245566554 678642111 21 11 24556
Q ss_pred hcCCCcEEEcC
Q 015201 306 KGTGVDVIGLD 316 (411)
Q Consensus 306 ~e~g~d~l~~d 316 (411)
.+.|+|.+.++
T Consensus 98 ~~~Gad~V~l~ 108 (232)
T 3igs_A 98 AQAGAAIIAVD 108 (232)
T ss_dssp HHHTCSEEEEE
T ss_pred HHcCCCEEEEC
Confidence 67899988654
No 374
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=29.36 E-value=1.4e+02 Score=27.72 Aligned_cols=74 Identities=9% Similarity=-0.064 Sum_probs=49.3
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCC-C---CCCCcHHHHHHHHHHHHhcCC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHG-V---LVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~-i---~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++.+.++++...+|.+++.. ..++++..++.+++++..+=.|+-++++.. . ......+.+..+++.+.++|.
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~-~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~l 173 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSP-GVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEI 173 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCT-TSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTC
T ss_pred HHHHHHhCCCcEEEEEeCCCCC-CCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcCC
Confidence 5566777888888888887631 124566667888888765546777776521 0 112334678899999999874
No 375
>3lrk_A Alpha-galactosidase 1; tetramer, GH27, glycoprotein, glycosida hydrolase; HET: NAG BTB; 1.95A {Saccharomyces cerevisiae} PDB: 3lrl_A* 3lrm_A*
Probab=29.34 E-value=1e+02 Score=30.83 Aligned_cols=66 Identities=15% Similarity=0.209 Sum_probs=44.8
Q ss_pred HhCCCEEEEecCCCC--------CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEecC------C----cc----cH
Q 015201 246 ESGAHCIQIFDSWGG--------QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYING------N----GG----FL 302 (411)
Q Consensus 246 e~G~d~i~i~D~~~~--------~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~CG------~----~~----~l 302 (411)
++|.+.|.+-|.|.+ ..+|+- +|. +|.+++.+|++ |.+..++++- . .. ..
T Consensus 63 ~~GyeyvvIDDGW~~~rd~~G~~~~d~~k-----FP~Glk~Lad~ih~~--GlKfGIw~~pG~~tC~~~pGsl~~~~~da 135 (479)
T 3lrk_A 63 DMGYKYIILDDCWSSGRDSDGFLVADEQK-----FPNGMGHVADHLHNN--SFLFGMYSSAGEYTCAGYPGSLGREEEDA 135 (479)
T ss_dssp GGTCCEEECCSSCEEEECTTSCEEECTTT-----CTTCHHHHHHHHHHT--TCEEEEEEESSSBCTTSSBCCTTCHHHHH
T ss_pred ccCceEEEECCccccccCCCCCEecChhh-----cCCCHHHHHHHHHHC--CCeeEEEecCccccccCCCchhHHHHHHH
Confidence 479999877776652 334433 265 89999999998 5667666542 1 11 13
Q ss_pred hHHhcCCCcEEEcCCC
Q 015201 303 ERMKGTGVDVIGLDWT 318 (411)
Q Consensus 303 ~~~~e~g~d~l~~d~~ 318 (411)
..+.+.|+|-+-+|.+
T Consensus 136 ~~fa~WGVDylK~D~c 151 (479)
T 3lrk_A 136 QFFANNRVDYLKYDNC 151 (479)
T ss_dssp HHHHHTTCCEEEEECT
T ss_pred HHHHHhCCcEEEEccC
Confidence 5688899999977754
No 376
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=29.18 E-value=2.9e+02 Score=24.08 Aligned_cols=98 Identities=17% Similarity=0.236 Sum_probs=58.4
Q ss_pred HHhhCHHHHHHHHHHHHH-----------------------------HHHHHHHHHHHhCCCEEEEecCC--CCCCCHHH
Q 015201 218 MCHTAPHVLRTLLSHLTQ-----------------------------AIADYIIYQVESGAHCIQIFDSW--GGQLPPHM 266 (411)
Q Consensus 218 ~l~~~Pe~v~~ll~~~~d-----------------------------~~~~~~~~~~e~G~d~i~i~D~~--~~~iSp~~ 266 (411)
.++.+|+.++++.+.... ...+.++.+.+.|++.|.+.+.. +....++
T Consensus 106 ~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~- 184 (252)
T 1ka9_F 106 AAVRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGYD- 184 (252)
T ss_dssp HHHHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCCC-
T ss_pred HHHhCcHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCCC-
Confidence 456788888888776531 12566777788999988776422 1122221
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEcC-----CCCCHHHHHHHh
Q 015201 267 WEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGLD-----WTVDMADGRKRL 328 (411)
Q Consensus 267 f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~d-----~~~di~~~~~~~ 328 (411)
+..++++.+.+ ++|++ ..|.+. .+..+.++|++++.+. ...++.++++.+
T Consensus 185 -----~~~i~~l~~~~-----~ipvi--a~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 185 -----LRLTRMVAEAV-----GVPVI--ASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp -----HHHHHHHHHHC-----SSCEE--EESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred -----HHHHHHHHHHc-----CCCEE--EeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHHHH
Confidence 23334444333 46754 344443 4666778899988653 345788887754
No 377
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=29.12 E-value=95 Score=29.23 Aligned_cols=43 Identities=16% Similarity=0.169 Sum_probs=20.0
Q ss_pred CCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHH
Q 015201 338 VDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEV 389 (411)
Q Consensus 338 vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a 389 (411)
.|-.+| ..+++++++.++. ++ +.--|..+| |+.++|++++.++
T Consensus 252 aD~I~LDn~~~~~l~~av~~-l~---~~v~ieaSG-----GIt~~~I~~~a~t 295 (320)
T 3paj_A 252 ADIIMLDNFSLEMMREAVKI-NA---GRAALENSG-----NITLDNLKECAET 295 (320)
T ss_dssp CSEEEEESCCHHHHHHHHHH-HT---TSSEEEEES-----SCCHHHHHHHHTT
T ss_pred CCEEEECCCCHHHHHHHHHH-hC---CCCeEEEEC-----CCCHHHHHHHHHc
Confidence 343334 3566666555543 22 222233332 3346666666554
No 378
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=29.09 E-value=3.4e+02 Score=24.92 Aligned_cols=64 Identities=11% Similarity=0.143 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecC-CCCC-CCHH---HHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccH
Q 015201 235 QAIADYIIYQVESGAHCIQIFDS-WGGQ-LPPH---MWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFL 302 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~-~~~~-iSp~---~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l 302 (411)
+.+.+.++.+.+.|+..+.+++- ..++ =+++ ..-+++..++++.++.++++ + +-++..|+...+
T Consensus 86 ~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~--~--vrvrviG~~~~l 154 (284)
T 2vg3_A 86 AVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKL--G--VRIRWVGSRPRL 154 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHT--T--EEEEEESCCTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEeCChhhC
Confidence 44455566777889999988773 2222 2222 23344566666666677775 4 567888987744
No 379
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=28.97 E-value=1.5e+02 Score=27.31 Aligned_cols=68 Identities=19% Similarity=0.100 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC--CcccHhHHhcCC-Cc
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING--NGGFLERMKGTG-VD 311 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG--~~~~l~~~~e~g-~d 311 (411)
+-.++-++++.++|||.|++-- ..-+++..+ ++.+.++. .+|++. .|. ...-.+.+.++| +.
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~---~~~~~~~~~--------~i~~~~~~---~vP~i~-n~~~~~~~~~~eL~~lG~v~ 230 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHS---RQKTPDEIL--------AFVKSWPG---KVPLVL-VPTAYPQLTEADIAALSKVG 230 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC---CCSSSHHHH--------HHHHHCCC---SSCEEE-CGGGCTTSCHHHHHTCTTEE
T ss_pred HHHHHHHHHHHHcCCcEEEeCC---CCCCHHHHH--------HHHHHcCC---CCCEEE-eccCCCCCCHHHHHhcCCee
Confidence 4556778899999999997621 134556554 44555532 268765 443 212368899999 88
Q ss_pred EEEcCC
Q 015201 312 VIGLDW 317 (411)
Q Consensus 312 ~l~~d~ 317 (411)
.+++..
T Consensus 231 ~v~~~~ 236 (290)
T 2hjp_A 231 IVIYGN 236 (290)
T ss_dssp EEEECS
T ss_pred EEEech
Confidence 887653
No 380
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=28.78 E-value=1.4e+02 Score=26.20 Aligned_cols=93 Identities=12% Similarity=0.130 Sum_probs=51.1
Q ss_pred cHhHHhcCCCcEEEcC--C-------CCCHHHHHHHh---CCCe-eEEccCCcCccCCCHHHHHHHHHHHHHHhCC---C
Q 015201 301 FLERMKGTGVDVIGLD--W-------TVDMADGRKRL---GNDI-SVQGNVDPACLFSPLPALTDEIQRVVKCAGS---R 364 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~d--~-------~~di~~~~~~~---g~~~-~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~---~ 364 (411)
.++.+.++|++.+.+. . ..++.++++.+ |=++ ++.+..+ +....++.++..++.++.+.. .
T Consensus 24 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~a~~lG~~ 100 (272)
T 2q02_A 24 FFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYP---FNQLTEEVVKKTEGLLRDAQGVGAR 100 (272)
T ss_dssp HHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETT---TTSCCHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhc---cCCcHHHHHHHHHHHHHHHHHhCCC
Confidence 3577778898887542 1 23455555544 4333 2222221 222235677888888887653 3
Q ss_pred CeEEeCCCCCCCC--Cc-HHHHHHHHHHHHhcCCC
Q 015201 365 GHILNLGHGVLVG--TP-EEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 365 gfIls~gc~i~~~--tp-~Eni~a~~~a~~~yg~~ 396 (411)
..++.+|..-+.. .- .++++.+.+.++++|-.
T Consensus 101 ~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~ 135 (272)
T 2q02_A 101 ALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQ 135 (272)
T ss_dssp EEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCE
T ss_pred EEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCE
Confidence 3444555321111 11 67778888888888743
No 381
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=28.53 E-value=2e+02 Score=26.16 Aligned_cols=88 Identities=17% Similarity=0.228 Sum_probs=52.8
Q ss_pred hCHHHHHHHHHHHHHHH---------------HHHHHHHHHhCCCEEEEecCCC------------------CCCCHHHH
Q 015201 221 TAPHVLRTLLSHLTQAI---------------ADYIIYQVESGAHCIQIFDSWG------------------GQLPPHMW 267 (411)
Q Consensus 221 ~~Pe~v~~ll~~~~d~~---------------~~~~~~~~e~G~d~i~i~D~~~------------------~~iSp~~f 267 (411)
.+|+.+.++++.+.+.+ .++++.+.++|+|+|.+.+... ++-.+.
T Consensus 147 ~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~-- 224 (311)
T 1ep3_A 147 TDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPA-- 224 (311)
T ss_dssp GCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGG--
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCcc--
Confidence 36777777777766541 4567788899999998865211 111221
Q ss_pred HHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEcC
Q 015201 268 EQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGLD 316 (411)
Q Consensus 268 ~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~d 316 (411)
.+|+..+++..+++.. ++|++ .+|.+. .+..+.+.|+|.+.+.
T Consensus 225 ---~~~~~~~~i~~i~~~~-~ipvi--a~GGI~~~~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 225 ---IKPVALKLIHQVAQDV-DIPII--GMGGVANAQDVLEMYMAGASAVAVG 270 (311)
T ss_dssp ---GHHHHHHHHHHHHTTC-SSCEE--ECSSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ---chHHHHHHHHHHHHhc-CCCEE--EECCcCCHHHHHHHHHcCCCEEEEC
Confidence 2333445555565543 56754 566653 3555566789988764
No 382
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=28.07 E-value=2.2e+02 Score=31.13 Aligned_cols=91 Identities=20% Similarity=0.280 Sum_probs=55.3
Q ss_pred HhhCHHHHHHHHHHHHHH---------------HHHHHHHHHHhCCCEEEEecCC------------------------C
Q 015201 219 CHTAPHVLRTLLSHLTQA---------------IADYIIYQVESGAHCIQIFDSW------------------------G 259 (411)
Q Consensus 219 l~~~Pe~v~~ll~~~~d~---------------~~~~~~~~~e~G~d~i~i~D~~------------------------~ 259 (411)
+..+|+.+.++++.+.+. +.+.++.+.++|+|+|.+.... +
T Consensus 684 ~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~g 763 (1025)
T 1gte_A 684 CGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYG 763 (1025)
T ss_dssp GGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCE
T ss_pred cccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCC
Confidence 347899999999988776 4667888889999999884211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEcC
Q 015201 260 GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGLD 316 (411)
Q Consensus 260 ~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~d 316 (411)
++-.+.. ....+...+++.+.+ +++|++ ..|.+. ....+...|++.+.+.
T Consensus 764 g~sg~~~-~~~~~~~v~~v~~~~----~~ipvi--~~GGI~s~~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 764 GVSGTAI-RPIALRAVTTIARAL----PGFPIL--ATGGIDSAESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp EEESGGG-HHHHHHHHHHHHHHS----TTCCEE--EESSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCCcccc-hhHHHHHHHHHHHHc----CCCCEE--EecCcCCHHHHHHHHHcCCCEEEEe
Confidence 1222322 222233444444333 357754 456654 2444555899998653
No 383
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=27.84 E-value=2.5e+02 Score=23.01 Aligned_cols=97 Identities=11% Similarity=0.096 Sum_probs=54.2
Q ss_pred HHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc--CCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHH
Q 015201 276 REIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL--DWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALT 351 (411)
Q Consensus 276 k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~--d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~ 351 (411)
.++++.+++. |..+.+.+.|... .++.+.+. +|.+.+ +. .|- +..+++. | . +-+.+.
T Consensus 22 ~~l~~~~~~~--g~~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~-~~~-~~~~~~~------g-~-------~~~~i~ 82 (182)
T 3can_A 22 IDILKRCGQQ--GIHRAVDTTLLARKETVDEVMRN-CELLLIDLKS-MDS-TVHQTFC------D-V-------PNELIL 82 (182)
T ss_dssp HHHHHHHHHT--TCCEEEECTTCCCHHHHHHHHHT-CSEEEEECCC-SCH-HHHHHHH------S-S-------CSHHHH
T ss_pred HHHHHHHHHC--CCcEEEECCCCCCHHHHHHHHhh-CCEEEEECCC-CCH-HHHHHHh------C-C-------CHHHHH
Confidence 4566777776 5778889999854 46777776 676644 43 233 3333321 1 0 125566
Q ss_pred HHHHHHHHHhCCCCeEEeCCCCCCCC--CcHHHHHHHHHHHHhc-CC
Q 015201 352 DEIQRVVKCAGSRGHILNLGHGVLVG--TPEEAVAHFFEVGKSM-KY 395 (411)
Q Consensus 352 ~ev~~~i~~~~~~gfIls~gc~i~~~--tp~Eni~a~~~a~~~y-g~ 395 (411)
+.++.+.+... .+.+. +.+-++ ...+.+.++++.++++ |.
T Consensus 83 ~~i~~l~~~g~--~v~i~--~~v~~~~n~n~~~~~~~~~~~~~~~g~ 125 (182)
T 3can_A 83 KNIRRVAEADF--PYYIR--IPLIEGVNADEKNIKLSAEFLASLPRH 125 (182)
T ss_dssp HHHHHHHHTTC--CEEEE--EEECBTTTCSHHHHHHHHHHHHHSSSC
T ss_pred HHHHHHHhCCC--eEEEE--EEEECCCCCCHHHHHHHHHHHHhCcCc
Confidence 66666555321 22222 222222 3567888888888887 63
No 384
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=27.73 E-value=1.1e+02 Score=27.99 Aligned_cols=113 Identities=19% Similarity=0.206 Sum_probs=68.9
Q ss_pred HHHHHhCCCEEEEecC-------CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 242 IYQVESGAHCIQIFDS-------WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 242 ~~~~e~G~d~i~i~D~-------~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+..++..++.+++.-+ -+|+ +-....+ +++.+++.+++. |+.+.+++..+...++.-.++|+|.+-
T Consensus 109 ~ial~~kP~~vtLVPEkreE~TTegGl-Dv~~~~~----~L~~~i~~L~~~--GIrVSLFIDpd~~qI~aA~~~GAd~IE 181 (278)
T 3gk0_A 109 DIACEIRPHDACLVPEKRSELTTEGGL-DVVGHFD----AVRAACKQLADA--GVRVSLFIDPDEAQIRAAHETGAPVIE 181 (278)
T ss_dssp HHHHHHCCSEEEECCCSGGGBCSSSSB-CTTTTHH----HHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEEECCCCCCCcCCCcch-hhhccHH----HHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHhCcCEEE
Confidence 3445667888776532 1232 1111223 455566677777 788999998887788989999999987
Q ss_pred cCCCCCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC---CCCeEEeCCCCCCCCCcHHHHHHH
Q 015201 315 LDWTVDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG---SRGHILNLGHGVLVGTPEEAVAHF 386 (411)
Q Consensus 315 ~d~~~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~---~~gfIls~gc~i~~~tp~Eni~a~ 386 (411)
+... .|.+- .+.++..++..++.+... .-|.-++.||++- .+|+..+
T Consensus 182 LhTG--------~YA~a-------------~~~~~~~~el~rl~~aA~~A~~lGL~VnAGHGL~----y~Nv~~i 231 (278)
T 3gk0_A 182 LHTG--------RYADA-------------HDAAEQQREFERIATGVDAGIALGLKVNAGHGLH----YTNVQAI 231 (278)
T ss_dssp ECCH--------HHHTC-------------SSHHHHHHHHHHHHHHHHHHHHTTCEEEECTTCC----TTTHHHH
T ss_pred Eecc--------hhhcc-------------CCchhHHHHHHHHHHHHHHHHHcCCEEecCCCCC----HHHHHHH
Confidence 7532 01110 023444555555555432 3689999999986 3466554
No 385
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=27.72 E-value=66 Score=29.77 Aligned_cols=70 Identities=13% Similarity=0.096 Sum_probs=47.8
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.++.+.+++++.-.|.++|. ++++..++++++++..+=.|+.+.+... ......+.+..+++.+.++|.
T Consensus 100 ~~~~~~~~p~r~~~~~~l~~~----~~~~a~~el~~~~~~~g~~Gv~l~~~~~-~~~l~d~~~~~~~~~~~e~~l 169 (336)
T 2wm1_A 100 LASTVVSYPRRFVGLGTLPMQ----APELAVKEMERCVKELGFPGVQIGTHVN-EWDLNAQELFPVYAAAERLKC 169 (336)
T ss_dssp HHHHHHHSTTTEEEEECCCTT----SHHHHHHHHHHHHHTSCCSEEEEESEET-TEETTCGGGHHHHHHHHHHTC
T ss_pred HHHHHHhccCceeEEEeCCCc----CHHHHHHHHHHHHHccCCeEEEECCcCC-CCCCCCccHHHHHHHHHHcCC
Confidence 345566778888778889884 4677788888888765546776765421 111223568899999999874
No 386
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=27.27 E-value=2.9e+02 Score=24.43 Aligned_cols=86 Identities=15% Similarity=0.061 Sum_probs=53.1
Q ss_pred HhHHhcCCCcEEEc----C---CC------CCHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEE
Q 015201 302 LERMKGTGVDVIGL----D---WT------VDMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHIL 368 (411)
Q Consensus 302 l~~~~e~g~d~l~~----d---~~------~di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIl 368 (411)
.++ .+.|.|-+.+ . .. .++..+++..++. .+--=+.+..| |+|+++..++-+++.+.+ ||
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~-~lKvIlEt~~L--t~eei~~a~~ia~eaGAD--fV- 145 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGR-VVKVITEEPYL--RDEERYTLYDIIAEAGAH--FI- 145 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGC--CHHHHHHHHHHHHHHTCS--EE-
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCC-CceEEEeccCC--CHHHHHHHHHHHHHcCCC--EE-
Confidence 356 7889988743 1 11 1566667766542 11111233333 688888888877776532 33
Q ss_pred eCCCCC-----------CCCCcHHHHHHHHHHHHhcC
Q 015201 369 NLGHGV-----------LVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 369 s~gc~i-----------~~~tp~Eni~a~~~a~~~yg 394 (411)
-++-+. +.++.+|.++.|.+.+++.|
T Consensus 146 KTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 146 KSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp ECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred EeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 333333 47899999999999977765
No 387
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=27.22 E-value=99 Score=30.14 Aligned_cols=69 Identities=17% Similarity=0.198 Sum_probs=46.4
Q ss_pred HHHHhCCCEEEEecCCCC---------CCCHHHHHHHHHHH-HHHHHHHHHhhCCCCCEEEEecC-C------------c
Q 015201 243 YQVESGAHCIQIFDSWGG---------QLPPHMWEQWSEPY-IREIVSLVRTKCPETPIVLYING-N------------G 299 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~---------~iSp~~f~ef~~Py-~k~i~~~i~~~~~g~~~~~H~CG-~------------~ 299 (411)
.+.++|.+.|.+-|.|.+ ..+|+- +|- ++.+++.+|++ |.+..+|.+- . .
T Consensus 42 gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~k-----FP~Gl~~l~~~i~~~--Glk~Giw~~~g~~~c~~~Pgs~~~~ 114 (417)
T 1szn_A 42 GLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATR-----FPDGIDGLAKKVHAL--GLKLGIYSTAGTATCAGYPASLGYE 114 (417)
T ss_dssp THHHHTCCEEECCSSCBCTTCCBTTBCCBCTTT-----CTTHHHHHHHHHHHT--TCEEEEEEESSSBCTTSCBCCTTCH
T ss_pred CchhhCCCEEEECCCccCCCCCCCCCEEECccc-----CCcCHHHHHHHHHHc--CCEEEEEeCCCCchhccCcchHhHH
Confidence 346889999988666642 233433 344 88999999998 5666666532 1 1
Q ss_pred c-cHhHHhcCCCcEEEcCCC
Q 015201 300 G-FLERMKGTGVDVIGLDWT 318 (411)
Q Consensus 300 ~-~l~~~~e~g~d~l~~d~~ 318 (411)
. ....+.+.|+|.+=+|..
T Consensus 115 ~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 115 DVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp HHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECCC
Confidence 1 246688899999977765
No 388
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=27.13 E-value=3.8e+02 Score=24.77 Aligned_cols=138 Identities=12% Similarity=0.032 Sum_probs=77.9
Q ss_pred HHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-cCCcc--cH----hHHhcCCCcE
Q 015201 240 YIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-NGNGG--FL----ERMKGTGVDV 312 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-CG~~~--~l----~~~~e~g~d~ 312 (411)
.++.+.+.++++|.+.+.-++...... -.++..+++.. |++.+.|. |.+.+ -+ ..+.+.|++.
T Consensus 44 ~~~~l~~l~p~fvsVT~gagg~~r~~t---------~~~a~~i~~~~-g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~n 113 (304)
T 3fst_A 44 SIDRLSSLKPKFVSVTYGANSGERDRT---------HSIIKGIKDRT-GLEAAPHLTCIDATPDELRTIARDYWNNGIRH 113 (304)
T ss_dssp HHHHHHTTCCSEEEECCCTTSSCHHHH---------HHHHHHHHHHH-CCCEEEEEESTTSCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCCEEEEeeCCCCcchhHH---------HHHHHHHHHHh-CCCeeEEeecCCCCHHHHHHHHHHHHHCCCCE
Confidence 455666778999888876666433322 23455555432 67778886 55543 13 3345689877
Q ss_pred EE-c--CC----------CCCHHHHHHHhCCCeeEEccCCcCc-cC-CCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCC
Q 015201 313 IG-L--DW----------TVDMADGRKRLGNDISVQGNVDPAC-LF-SPLPALTDEIQRVVKCAGSRGHILNLGHGVLVG 377 (411)
Q Consensus 313 l~-~--d~----------~~di~~~~~~~g~~~~l~G~vd~~~-L~-gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~ 377 (411)
+- + |. ..|+-+.-+..+ ..++.+...|.. .. .+.+.-.+..++-++.+. .|+++ +.-
T Consensus 114 ILaLrGDpp~~~~~~~~~A~dLv~~ir~~~-~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGA--df~iT-----Q~f 185 (304)
T 3fst_A 114 IVALRGDLPPGSGKPEMYASDLVTLLKEVA-DFDISVAAYPEVHPEAKSAQADLLNLKRKVDAGA--NRAIT-----QFF 185 (304)
T ss_dssp EEEECCCCC------CCCHHHHHHHHHHHC-CCEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTC--CEEEE-----CCC
T ss_pred EEEecCCCCCCCCCCCCCHHHHHHHHHHcC-CCeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCC--CEEEe-----Ccc
Confidence 62 2 21 113333333344 366655555532 22 454444445555555543 46664 455
Q ss_pred CcHHHHHHHHHHHHhcCC
Q 015201 378 TPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 378 tp~Eni~a~~~a~~~yg~ 395 (411)
-+.+.+..+++.+++.|.
T Consensus 186 fD~~~~~~f~~~~r~~Gi 203 (304)
T 3fst_A 186 FDVESYLRFRDRCVSAGI 203 (304)
T ss_dssp SCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 578899999999988773
No 389
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=27.12 E-value=1.7e+02 Score=27.11 Aligned_cols=62 Identities=19% Similarity=0.403 Sum_probs=39.3
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcCC
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLDW 317 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d~ 317 (411)
++...++|+|+|.+ |. ++|+ +++++.+.+++..|++++ -.-|.++ .+..+.+.|+|.+++..
T Consensus 210 ~~~A~~aGaD~I~l-d~----~~~~--------~l~~~v~~l~~~~~~~~I--~ASGGIt~~ni~~~~~aGaD~i~vGs 273 (299)
T 2jbm_A 210 AVQAAEAGADLVLL-DN----FKPE--------ELHPTATVLKAQFPSVAV--EASGGITLDNLPQFCGPHIDVISMGM 273 (299)
T ss_dssp HHHHHHTTCSEEEE-ES----CCHH--------HHHHHHHHHHHHCTTSEE--EEESSCCTTTHHHHCCTTCCEEECTH
T ss_pred HHHHHHcCCCEEEE-CC----CCHH--------HHHHHHHHhhccCCCeeE--EEECCCCHHHHHHHHHCCCCEEEECh
Confidence 33445789999865 43 4554 444555555544344543 3446654 68999999999998753
No 390
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=27.11 E-value=2.5e+02 Score=24.36 Aligned_cols=80 Identities=13% Similarity=0.073 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc---cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG---FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~---~l~~~~e~g~d~l~~ 315 (411)
+.++++++.|++.+.+.... +.. .+.++.+++..++. + ...|... .++...+.|.|.++.
T Consensus 32 ~~~~al~~gGv~~iel~~k~-----~~~---------~~~i~~l~~~~~~~-~--vgagtvi~~d~~~~A~~aGAd~v~~ 94 (214)
T 1wbh_A 32 PMAKALVAGGVRVLNVTLRT-----ECA---------VDAIRAIAKEVPEA-I--VGAGTVLNPQQLAEVTEAGAQFAIS 94 (214)
T ss_dssp HHHHHHHHTTCCEEEEESCS-----TTH---------HHHHHHHHHHCTTS-E--EEEESCCSHHHHHHHHHHTCSCEEE
T ss_pred HHHHHHHHcCCCEEEEeCCC-----hhH---------HHHHHHHHHHCcCC-E--EeeCEEEEHHHHHHHHHcCCCEEEc
Confidence 55677888999999887432 211 12344343333232 2 2334432 356677889999876
Q ss_pred CC-CCCHHHHHHHhCCCeeEEc
Q 015201 316 DW-TVDMADGRKRLGNDISVQG 336 (411)
Q Consensus 316 d~-~~di~~~~~~~g~~~~l~G 336 (411)
.. ..++.++++.+|-.. +.|
T Consensus 95 p~~d~~v~~~~~~~g~~~-i~G 115 (214)
T 1wbh_A 95 PGLTEPLLKAATEGTIPL-IPG 115 (214)
T ss_dssp SSCCHHHHHHHHHSSSCE-EEE
T ss_pred CCCCHHHHHHHHHhCCCE-EEe
Confidence 42 335666777777433 335
No 391
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=26.97 E-value=1.4e+02 Score=27.59 Aligned_cols=48 Identities=19% Similarity=0.235 Sum_probs=33.2
Q ss_pred HHHHHHHhCCCEEEEecCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 240 YIIYQVESGAHCIQIFDSWGG-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 240 ~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
.++.+++.|+.+|.+.....+ .++ -|.+..+++.+.++ |+|+++|.-.
T Consensus 132 el~~~~~~g~~Gv~l~~~~~~~~l~--------d~~~~p~~~~~~e~--~lpv~iH~~~ 180 (334)
T 2hbv_A 132 EASRAVAAGHLGIQIGNHLGDKDLD--------DATLEAFLTHCANE--DIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHTCCCEEEESCBTTBCTT--------SHHHHHHHHHHHHT--TCCEEEECCS
T ss_pred HHHHHHHcCCeEEEECCCCCCCCCC--------cHHHHHHHHHHHHC--CCEEEECCCC
Confidence 344445679999877765444 222 26777788888887 7999999853
No 392
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=26.94 E-value=2.4e+02 Score=29.98 Aligned_cols=47 Identities=13% Similarity=0.191 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhCC-CCeE-EeCCCCCCCCCcHHHHHHHHHHHHhcC
Q 015201 347 LPALTDEIQRVVKCAGS-RGHI-LNLGHGVLVGTPEEAVAHFFEVGKSMK 394 (411)
Q Consensus 347 ~eeV~~ev~~~i~~~~~-~gfI-ls~gc~i~~~tp~Eni~a~~~a~~~yg 394 (411)
++-++++++++++..++ ..+| -+.|+.. .+.+.+++++|.+.+|++-
T Consensus 368 ~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~-~g~~~~~~~~l~~~~k~~D 416 (801)
T 3gm8_A 368 DEWWQKDMTDFIKRDRNHPSIIMWSIGNEV-TGATPEIQHNLVSLFHQLD 416 (801)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEESC-SSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECccCC-CCcHHHHHHHHHHHHHHHC
Confidence 45567788888888875 3444 4666666 5556788999999999873
No 393
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=26.90 E-value=2.5e+02 Score=26.71 Aligned_cols=87 Identities=11% Similarity=0.100 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHH------------HHHHHHHHHHhCCCEEEEecCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCC
Q 015201 222 APHVLRTLLSHLTQA------------IADYIIYQVESGAHCIQIFDSW--GGQLPPHMWEQWSEPYIREIVSLVRTKCP 287 (411)
Q Consensus 222 ~Pe~v~~ll~~~~d~------------~~~~~~~~~e~G~d~i~i~D~~--~~~iSp~~f~ef~~Py~k~i~~~i~~~~~ 287 (411)
+++.+.++++++.+. ..+..+.+.++|+|.+.+.... ....+|+. .+..++++ ++..
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~----~~~~i~~l----~~~~- 210 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGG----EALNLKEF----IGSL- 210 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC---------CHHHH----HHHC-
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcc----cHHHHHHH----HHhc-
Confidence 778888887776542 3455667778999998664221 22455532 11222233 3332
Q ss_pred CCCEEEEecCCcccHhHHhcCCCcEEEcCC
Q 015201 288 ETPIVLYINGNGGFLERMKGTGVDVIGLDW 317 (411)
Q Consensus 288 g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~ 317 (411)
++|+++-.+-.......+.+.|+|.+.+..
T Consensus 211 ~~pvi~ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 211 DVPVIAGGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SSCEEEECCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCCEEECCcCCHHHHHHHHHcCCCEEEECC
Confidence 678877211111235677789999997643
No 394
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=26.79 E-value=1.6e+02 Score=30.12 Aligned_cols=86 Identities=17% Similarity=0.059 Sum_probs=50.0
Q ss_pred HHHHHHHHHHhhCCCCCEEEEecCCcc-cHhHHhcCCCcEEEcCCCCCHHHHHHHhC--CCeeEEccCCcCccCCCHHHH
Q 015201 274 YIREIVSLVRTKCPETPIVLYINGNGG-FLERMKGTGVDVIGLDWTVDMADGRKRLG--NDISVQGNVDPACLFSPLPAL 350 (411)
Q Consensus 274 y~k~i~~~i~~~~~g~~~~~H~CG~~~-~l~~~~e~g~d~l~~d~~~di~~~~~~~g--~~~~l~G~vd~~~L~gt~eeV 350 (411)
.+.+.++..++. +.++..|..+... .+..+.+.|+..-+. ....+++.+++. -.+.+.| . .....+++
T Consensus 203 ~l~~~l~~A~~~--g~pV~~Ha~~~~~~~L~~~~~aGv~~~H~--~~~~eea~e~l~~G~~i~i~g-s----~~~~~~~l 273 (608)
T 3nqb_A 203 RMSGIVQAGLAA--EKLVCGHARGLKNADLNAFMAAGVSSDHE--LVSGEDLMAKLRAGLTIELRG-S----HDHLLPEF 273 (608)
T ss_dssp HHHHHHHHHHHH--TCEEEECCTTCCHHHHHHHHHTTCCEECC--CCSHHHHHHHHHTTCEEEEES-S----SGGGHHHH
T ss_pred HHHHHHHHHHHc--CCEEEEcCCCCCHHHHHHHHHcCCCeeec--cCCHHHHHHHHHCCCEEEEec-c----ccccHHHH
Confidence 355667777777 6899999777665 477788889887432 234466666553 3333321 1 11222333
Q ss_pred HHHHHHHHH--HhCCCCeEEeCCC
Q 015201 351 TDEIQRVVK--CAGSRGHILNLGH 372 (411)
Q Consensus 351 ~~ev~~~i~--~~~~~gfIls~gc 372 (411)
++.+. ...+..+.++++.
T Consensus 274 ----~~~i~~~~~~g~~v~lgTD~ 293 (608)
T 3nqb_A 274 ----VAALNTLGHLPQTVTLCTDD 293 (608)
T ss_dssp ----HHHHHHHTSCCTTEEEECBS
T ss_pred ----HHHHHhHhhcCceEEEecCC
Confidence 33443 2234689999985
No 395
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=26.53 E-value=1.2e+02 Score=26.68 Aligned_cols=57 Identities=9% Similarity=-0.029 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING 297 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG 297 (411)
.+.+.++...+.|++.+.+.-.. -+++.|+++....++++.+.++++ |+.+.+|.++
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g~---~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~~E~~~ 142 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPLN---DGTIVPPEVTVEAIKRLSDLFARY--DIQGLVEPLG 142 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCC---SSBCCCHHHHHHHHHHHHHHHHTT--TCEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEEccCC---CchhHHHHHHHHHHHHHHHHHHHc--CCEEEEEecC
Confidence 34556666777899998764222 223556555588999999999987 7888998875
No 396
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=26.26 E-value=3.1e+02 Score=23.59 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC----------Cc-ccHhHHh
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING----------NG-GFLERMK 306 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG----------~~-~~l~~~~ 306 (411)
.+.++++.++|++++.+. +| +.++.+++.. ++|++--..+ .. ..++.+.
T Consensus 39 ~~~a~~~~~~G~~~i~~~-------~~------------~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~ 98 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN-------SV------------RDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLA 98 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE-------SH------------HHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHH
T ss_pred HHHHHHHHHCCCcEeecC-------CH------------HHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHH
Confidence 345567778899998763 33 2255555554 6776311111 11 1367788
Q ss_pred cCCCcEEEcC
Q 015201 307 GTGVDVIGLD 316 (411)
Q Consensus 307 e~g~d~l~~d 316 (411)
+.|+|.+.++
T Consensus 99 ~~Gad~V~l~ 108 (234)
T 1yxy_A 99 ALNIAVIAMD 108 (234)
T ss_dssp TTTCSEEEEE
T ss_pred HcCCCEEEEc
Confidence 8999998764
No 397
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=26.18 E-value=56 Score=30.81 Aligned_cols=85 Identities=12% Similarity=0.174 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHHhhCCCCCEEEEecCCcc----cHhHHhcCCCcEEEcCCCCCHHHHHHHhCCCeeEE--ccCCcCcc
Q 015201 270 WSEPYIREIVSLVRTKCPETPIVLYINGNGG----FLERMKGTGVDVIGLDWTVDMADGRKRLGNDISVQ--GNVDPACL 343 (411)
Q Consensus 270 f~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~----~l~~~~e~g~d~l~~d~~~di~~~~~~~g~~~~l~--G~vd~~~L 343 (411)
=+....+++++..+++ |+++ -+||+.. ..+.+.++|++.+++... .+..+++.+.. ..+. -.+-...|
T Consensus 231 ~v~~ai~~vv~aar~a--G~~v--gvcge~~~dp~~~~~l~~lG~~~~si~p~-~i~~~~~~~~~-~~~~~~~~~~~~~l 304 (324)
T 2xz9_A 231 AILRLVKMVIDAAHKE--GKFA--AMCGEMAGDPLAAVILLGLGLDEFSMSAT-SIPEIKNIIRN-VEYEKAKEIAEKAL 304 (324)
T ss_dssp HHHHHHHHHHHHHHHT--TCEE--EECSGGGGCHHHHHHHHHHTCCEEEECGG-GHHHHHHHHTT-SCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--CCce--eecCccCCCHHHHHHHHHCCCCEEEEChh-HHHHHHHHHHH-cCHHHHHHHHHHHH
Confidence 3555777888888887 6764 5688863 357788999999987543 35555555542 1110 00111124
Q ss_pred -CCCHHHHHHHHHHHHHH
Q 015201 344 -FSPLPALTDEIQRVVKC 360 (411)
Q Consensus 344 -~gt~eeV~~ev~~~i~~ 360 (411)
..|+++|++.+++.++.
T Consensus 305 ~~~~~~~v~~~~~~~~~~ 322 (324)
T 2xz9_A 305 NMSEAREIEKMMKDVIKD 322 (324)
T ss_dssp TCSCHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHh
Confidence 38999999998877664
No 398
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=26.17 E-value=1.5e+02 Score=28.17 Aligned_cols=57 Identities=9% Similarity=0.037 Sum_probs=28.7
Q ss_pred CcCccCCCHHHHHHHHHHHHHHhCC----CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 339 DPACLFSPLPALTDEIQRVVKCAGS----RGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 339 d~~~L~gt~eeV~~ev~~~i~~~~~----~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+|..+..+.++..+++++.++...+ +...+..+-.-++..++|.++++++.++++|.
T Consensus 173 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~ 233 (456)
T 3ls9_A 173 CDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDV 233 (456)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTC
T ss_pred CccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCC
Confidence 3333334555555666666655432 22222222223345566667777777777653
No 399
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=26.16 E-value=1.6e+02 Score=20.26 Aligned_cols=46 Identities=9% Similarity=-0.008 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 346 PLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 346 t~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.+++.+.+++.........+++..+-. +|.+.+..+++.+++.|-
T Consensus 28 ~~~~L~~~l~~~~~~~~~~~V~I~aD~~----~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 28 TEEMVTQLSRQEFDKDNNTLFLVGGAKE----VPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEECTT----SCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhhCCCceEEEEcCCC----CCHHHHHHHHHHHHHcCC
Confidence 5678888888777664446788887754 558899999999998873
No 400
>1luc_A Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_A 3fgc_A*
Probab=26.03 E-value=31 Score=32.70 Aligned_cols=29 Identities=10% Similarity=0.027 Sum_probs=24.2
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCCeEEeCC
Q 015201 343 LFSPLPALTDEIQRVVKCAGSRGHILNLG 371 (411)
Q Consensus 343 L~gt~eeV~~ev~~~i~~~~~~gfIls~g 371 (411)
+.||||+|.+.+++..+..|-.+|++.+.
T Consensus 300 ~vGtpe~va~~l~~~~~~~G~d~~~l~~~ 328 (355)
T 1luc_A 300 PVGTPEECIAIIQQDIDATGIDNICCGFE 328 (355)
T ss_dssp SEESHHHHHHHHHHHHHHHCCCEEEEECG
T ss_pred cccCHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 56999999999999999776568888753
No 401
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=26.02 E-value=3.4e+02 Score=23.92 Aligned_cols=100 Identities=7% Similarity=-0.141 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecC--C--CCC---CC------HHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc
Q 015201 233 LTQAIADYIIYQVESGAHCIQIFDS--W--GGQ---LP------PHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG 299 (411)
Q Consensus 233 ~~d~~~~~~~~~~e~G~d~i~i~D~--~--~~~---iS------p~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~ 299 (411)
..+.+.+.++...+.|++.+.+... + +.. ++ .+.-.+.+...++++.+.++++ |+.+.+|.+...
T Consensus 88 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lE~~~~~ 165 (301)
T 3cny_A 88 ASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKY--GLKVAYHHHMGT 165 (301)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHT--TCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHc--CCEEEEecCCCc
Confidence 3455556667777889999876531 1 211 11 3444567888999999999987 788899987542
Q ss_pred -----ccH-hHHhcCCCc--EEEcCC------CCCHHHHHHHhCCCeeE
Q 015201 300 -----GFL-ERMKGTGVD--VIGLDW------TVDMADGRKRLGNDISV 334 (411)
Q Consensus 300 -----~~l-~~~~e~g~d--~l~~d~------~~di~~~~~~~g~~~~l 334 (411)
..+ ..+.+.+-+ .+.+|. ..|+.+..+++++++..
T Consensus 166 ~~~~~~~~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~ 214 (301)
T 3cny_A 166 GIQTKEETDRLMANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRVVH 214 (301)
T ss_dssp SSCSHHHHHHHHHTSCTTTCEEEEEHHHHHHHHSCSHHHHHHHGGGEEE
T ss_pred ccCCHHHHHHHHHhCCccceeEEechHHHHHcCCCHHHHHHHHHhheeE
Confidence 123 334445533 233432 24677777777776543
No 402
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=26.01 E-value=1.8e+02 Score=26.21 Aligned_cols=106 Identities=17% Similarity=0.140 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEecCC-----cc-cHhHHhcCCCc----E-EEcCCCCCHHHHHHHh--CCCeeEEccC
Q 015201 272 EPYIREIVSLVRTKCPETPIVLYINGN-----GG-FLERMKGTGVD----V-IGLDWTVDMADGRKRL--GNDISVQGNV 338 (411)
Q Consensus 272 ~Py~k~i~~~i~~~~~g~~~~~H~CG~-----~~-~l~~~~e~g~d----~-l~~d~~~di~~~~~~~--g~~~~l~G~v 338 (411)
...+++.++..++. +.|+++|+-.. .. .++.+.+.|.+ + +++ +...+++.+ |-.+.+. +
T Consensus 109 ~~~f~~ql~lA~e~--~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~----~~~~a~~~l~~G~yis~~--~ 180 (261)
T 3guw_A 109 IEVLKSQLELAKRM--DVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV----NFETLDMVLETEYWIGLT--V 180 (261)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC----CTTTHHHHHTSSSEEEEE--C
T ss_pred HHHHHHHHHHHHHh--CCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC----CHHHHHHHHhCCEEEEec--C
Confidence 45666777777777 79999999754 23 46777777643 2 245 344455444 3333333 1
Q ss_pred CcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHh
Q 015201 339 DPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKS 392 (411)
Q Consensus 339 d~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~ 392 (411)
.|..+ |.+ .++++++.....++++.|++...++. |.++...++...+
T Consensus 181 ~pg~~--t~~----~~~~~v~~ipldrlLlETD~P~~pn~-P~~v~~~~~~la~ 227 (261)
T 3guw_A 181 QPGKL--SAE----DAARIVAEHGPERFMLNSDAGYRDVE-ITTVAEAAVKIEE 227 (261)
T ss_dssp C-------------CCTTGGGGCC-CCEEEECCCCCC-------CCCCTTHHHH
T ss_pred CCCcc--cHH----HHHHHHHhCCcceEEEecCCCCCCCC-HHHHHHHHHHHHh
Confidence 12222 111 12455555555799999998653332 3334444444444
No 403
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=25.96 E-value=3.4e+02 Score=23.81 Aligned_cols=132 Identities=11% Similarity=0.048 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEe--cCCC-----CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC----c----
Q 015201 235 QAIADYIIYQVESGAHCIQIF--DSWG-----GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN----G---- 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~--D~~~-----~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~----~---- 299 (411)
+.+.+.++...+.|++.+.+. .+++ .-.+.+...+.+...++++.+.++++ |+.+.+|..+. .
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~~ 165 (290)
T 2qul_A 88 EYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDY--GIIYALEVVNRFEQWLCNDA 165 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHH--TCEEEEECCCTTTCSSCCSH
T ss_pred HHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEeCccccccccCCH
Confidence 445556667778899987642 1222 22345556677888999999999988 68889998752 1
Q ss_pred cc-HhHHhcCCCcE--EEcCC------CCCHHHHHHHhCCCeeEE--ccCCcCcc-CCCHHHHHHHHHHHHHHhCC-CCe
Q 015201 300 GF-LERMKGTGVDV--IGLDW------TVDMADGRKRLGNDISVQ--GNVDPACL-FSPLPALTDEIQRVVKCAGS-RGH 366 (411)
Q Consensus 300 ~~-l~~~~e~g~d~--l~~d~------~~di~~~~~~~g~~~~l~--G~vd~~~L-~gt~eeV~~ev~~~i~~~~~-~gf 366 (411)
.. .+.+.+.|-.. +.+|. ..|+.+.-+++++++..+ -+.+...+ .|+. + -+.+.+.++..+- |-+
T Consensus 166 ~~~~~l~~~~~~~~~g~~~D~~h~~~~g~d~~~~l~~~~~~i~~vH~~D~~~~~~G~G~i-d-~~~~~~~L~~~gy~g~~ 243 (290)
T 2qul_A 166 KEAIAFADAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMGHFHLGEANRLPPGEGRL-P-WDEIFGALKEIGYDGTI 243 (290)
T ss_dssp HHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHTTTTEEEEEECCTTSCCTTSSCS-C-HHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHHcCCCCEEEEEEchhhhhcCCCHHHHHHHHHhheeEEEEccCCCCCCCCCCc-C-HHHHHHHHHHhCCCceE
Confidence 11 23344444322 33332 358888888888776442 11121112 2432 1 3445556666553 555
Q ss_pred EEeC
Q 015201 367 ILNL 370 (411)
Q Consensus 367 Ils~ 370 (411)
++-.
T Consensus 244 ~lE~ 247 (290)
T 2qul_A 244 VMEP 247 (290)
T ss_dssp EECC
T ss_pred EEEe
Confidence 5543
No 404
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=25.75 E-value=1.4e+02 Score=26.48 Aligned_cols=124 Identities=12% Similarity=0.152 Sum_probs=69.9
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEc--C--
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGL--D-- 316 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~--d-- 316 (411)
++.++++|+|.|.+ +.. ...+|+. .+++++.+++. |. .++..|.+........+.|+|.+.+ .
T Consensus 94 i~~~~~~Gad~V~l-~~~-~~~~p~~--------l~~~i~~~~~~--g~-~v~~~v~t~eea~~a~~~Gad~Ig~~~~g~ 160 (232)
T 3igs_A 94 VDALAQAGAAIIAV-DGT-ARQRPVA--------VEALLARIHHH--HL-LTMADCSSVDDGLACQRLGADIIGTTMSGY 160 (232)
T ss_dssp HHHHHHHTCSEEEE-ECC-SSCCSSC--------HHHHHHHHHHT--TC-EEEEECCSHHHHHHHHHTTCSEEECTTTTS
T ss_pred HHHHHHcCCCEEEE-Ccc-ccCCHHH--------HHHHHHHHHHC--CC-EEEEeCCCHHHHHHHHhCCCCEEEEcCccC
Confidence 45567899998854 332 2356643 34455666665 45 4566776655667778899999942 1
Q ss_pred ------CCCCHHHHHHHh--CCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHH
Q 015201 317 ------WTVDMADGRKRL--GNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFE 388 (411)
Q Consensus 317 ------~~~di~~~~~~~--g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~ 388 (411)
...|+..+++.. +-.++-.|||. |++++. ++++. |-.++++++. +- -|.+..++|++
T Consensus 161 t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI~------t~~d~~----~~~~~-GadgV~VGsa--l~--~p~~~~~~~~~ 225 (232)
T 3igs_A 161 TTPDTPEEPDLPLVKALHDAGCRVIAEGRYN------SPALAA----EAIRY-GAWAVTVGSA--IT--RLEHICGWYND 225 (232)
T ss_dssp SSSSCCSSCCHHHHHHHHHTTCCEEEESCCC------SHHHHH----HHHHT-TCSEEEECHH--HH--CHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHhcCCcEEEECCCC------CHHHHH----HHHHc-CCCEEEEehH--hc--CHHHHHHHHHH
Confidence 123554444432 22233345553 566654 44443 4357777644 22 25666777776
Q ss_pred HHHh
Q 015201 389 VGKS 392 (411)
Q Consensus 389 a~~~ 392 (411)
+.++
T Consensus 226 ~i~~ 229 (232)
T 3igs_A 226 ALKK 229 (232)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6543
No 405
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=25.74 E-value=1.4e+02 Score=27.83 Aligned_cols=10 Identities=20% Similarity=-0.340 Sum_probs=5.7
Q ss_pred EEEecccHHH
Q 015201 189 VLGFVGAPWT 198 (411)
Q Consensus 189 v~~~~~gPft 198 (411)
++..+.||..
T Consensus 101 ~v~~i~G~a~ 110 (300)
T 3l0g_A 101 TLVSGEALAI 110 (300)
T ss_dssp EEEEEEEEHH
T ss_pred EEEEEEECHH
Confidence 3455667654
No 406
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=25.56 E-value=3.6e+02 Score=24.05 Aligned_cols=65 Identities=15% Similarity=0.183 Sum_probs=35.3
Q ss_pred HHHHHHHHhCCCEEEEe--cC-CCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-cc-cHhHHhcCCCc
Q 015201 239 DYIIYQVESGAHCIQIF--DS-WGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-GG-FLERMKGTGVD 311 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~--D~-~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~~-~l~~~~e~g~d 311 (411)
+.++.+.++|+|.+.+- |. +.. -++|+. ++.+++.+|+.|+-+|.-=+ .. +++.+.+.|+|
T Consensus 44 ~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~------------v~~lr~~~p~~~ldvHLmv~~p~~~i~~~~~aGAd 111 (246)
T 3inp_A 44 DDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMV------------LKALRDYGITAGMDVHLMVKPVDALIESFAKAGAT 111 (246)
T ss_dssp HHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHH------------HHHHHHHTCCSCEEEEEECSSCHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEEEecCCCcCcchhcCHHH------------HHHHHHhCCCCeEEEEEeeCCHHHHHHHHHHcCCC
Confidence 44556677899987542 31 111 245533 33444443345666666432 22 46777777777
Q ss_pred EEEc
Q 015201 312 VIGL 315 (411)
Q Consensus 312 ~l~~ 315 (411)
.+++
T Consensus 112 ~itv 115 (246)
T 3inp_A 112 SIVF 115 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7755
No 407
>1tvl_A Protein YTNJ; beta-alpha barrel, structural genomics, PSI, protein structu initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.1.16.4 PDB: 1yw1_A*
Probab=25.49 E-value=48 Score=32.79 Aligned_cols=40 Identities=13% Similarity=0.198 Sum_probs=30.4
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHH
Q 015201 342 CLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFE 388 (411)
Q Consensus 342 ~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~ 388 (411)
.+.||||+|.+..++..+..+-.+|++.+.. ++.++.+.+
T Consensus 364 ~ivGTpe~Vad~L~~~~~~~g~D~f~l~~~~-------~~~le~fa~ 403 (454)
T 1tvl_A 364 LFIGTPERVASLIETWFNAEAADGFIVGSDI-------PGTLDAFVE 403 (454)
T ss_dssp SSEECHHHHHHHHHHHHHTTSCSEEEECCCS-------TTHHHHHHH
T ss_pred eEEECHHHHHHHHHHHHHhcCCCEEEEcCCC-------hHHHHHHHH
Confidence 3569999999999999998765689997642 455665554
No 408
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=25.30 E-value=1.4e+02 Score=24.86 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHhhCCCCCEEEEecCCcc-c-HhHHhcCCCcEEEcCCCCCHHHHHHHhCCC
Q 015201 272 EPYIREIVSLVRTKCPETPIVLYINGNGG-F-LERMKGTGVDVIGLDWTVDMADGRKRLGND 331 (411)
Q Consensus 272 ~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~-l~~~~e~g~d~l~~d~~~di~~~~~~~g~~ 331 (411)
..|+++.++.+.+.+ . .++-+-+.+. . +.++.+.|+-++-.-...|+..+.+..|.+
T Consensus 58 ~~~l~~~v~kI~~~g--~-nVVl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~ 116 (159)
T 1ass_A 58 TNTFKQMVEKIKKSG--A-NVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAK 116 (159)
T ss_dssp HHHHHHHHHHHHHTT--C-SEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCC
T ss_pred HHHHHHHhhhhhhCC--C-eEEEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCe
Confidence 445555556665552 2 2223334444 2 466666666665443344666666666653
No 409
>1fvp_A Flavoprotein 390, FP390; flavin-binding protein; HET: FMA; 2.70A {Photobacterium phosphoreum} SCOP: c.1.16.2
Probab=25.23 E-value=35 Score=29.82 Aligned_cols=28 Identities=7% Similarity=-0.012 Sum_probs=22.8
Q ss_pred cCCCHHHHHH-HHHHHHHHhCCCCeEEeC
Q 015201 343 LFSPLPALTD-EIQRVVKCAGSRGHILNL 370 (411)
Q Consensus 343 L~gt~eeV~~-ev~~~i~~~~~~gfIls~ 370 (411)
+.||||+|.+ .+++.++..|-..+++..
T Consensus 173 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~ 201 (231)
T 1fvp_A 173 VTGSYKDCLSYVANLAGKFDNTVDFLLCF 201 (231)
T ss_dssp CEESSHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CccCHHHHHHHHHHHHHHHhCcCeEEEEe
Confidence 4599999999 999999987656777754
No 410
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=25.12 E-value=3.6e+02 Score=23.85 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC--CCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc-----ccH-hHHh
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSW--GGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG-----GFL-ERMK 306 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~--~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~-----~~l-~~~~ 306 (411)
+.+.+.++...+.|++.+.+.-.. .. .+.+...+.+...++++.+.+++. |+.+.+|..... ..+ +.+.
T Consensus 108 ~~~~~~i~~A~~lG~~~v~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lEn~~~~~~~~~~~~~~l~~ 184 (295)
T 3cqj_A 108 EIMRKAIQFAQDVGIRVIQLAGYDVYYQ-EANNETRRRFRDGLKESVEMASRA--QVTLAMEIMDYPLMNSISKALGYAH 184 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSCSSS-CCCHHHHHHHHHHHHHHHHHHHHH--TCEEEEECCSSGGGCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcC-cCHHHHHHHHHHHHHHHHHHHHHh--CCEEEEeeCCCcccCCHHHHHHHHH
Confidence 445556667778899998764211 11 233445566778899999999988 688899988652 112 3333
Q ss_pred cCCCcE--EEcC------CCCCHHHHHHHhCCCeeEE--ccCCcC----ccC--CCHHHHHHHHHHHHHHhC-CCCeEEe
Q 015201 307 GTGVDV--IGLD------WTVDMADGRKRLGNDISVQ--GNVDPA----CLF--SPLPALTDEIQRVVKCAG-SRGHILN 369 (411)
Q Consensus 307 e~g~d~--l~~d------~~~di~~~~~~~g~~~~l~--G~vd~~----~L~--gt~eeV~~ev~~~i~~~~-~~gfIls 369 (411)
+.+-.. +.+| ...|+.+.-+++++++..+ -+.++. ... |+.+ . +++.+.|+..+ .|-+++-
T Consensus 185 ~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~g~~~~~p~G~G~id-~-~~~~~~L~~~gy~g~i~lE 262 (295)
T 3cqj_A 185 YLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGVFKNVPFGEGVVD-F-ERCFETLKQSGYCGPYLIE 262 (295)
T ss_dssp HHCCTTEEEECBHHHHHSSSCCHHHHHHHTGGGBCCEEECEEETTEEEEECTTSSSCC-H-HHHHHHHHHTTCCSCEEEC
T ss_pred hcCCCCeEEEeccchHhhcCCCHHHHHHHhccceEEEEeecCCCCccCCcCCCCCccC-H-HHHHHHHHHCCCceeEEEE
Confidence 444322 3333 2457777766677665421 111121 112 3322 2 34555566655 3555554
Q ss_pred CCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 370 LGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 370 ~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.-.. ....|.|.++.-++..+++
T Consensus 263 ~~~~-~~~~~~~~~~~s~~~l~~~ 285 (295)
T 3cqj_A 263 MWSE-TAEDPAAEVAKARDWVKAR 285 (295)
T ss_dssp CCGG-GSSCHHHHHHHHHHHHHHH
T ss_pred ecCC-CCCCHHHHHHHHHHHHHHH
Confidence 3221 1245667777666666554
No 411
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=25.05 E-value=1.3e+02 Score=26.35 Aligned_cols=69 Identities=12% Similarity=0.091 Sum_probs=39.1
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
+.++.+.++|+|.+.+-.--+.++..- .+.. ++++.+++.. +.++..|.=-+.. +++.+.+.|+|++.+
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~---~~~~----~~~~~lr~~~-~~~~~v~lmv~d~~~~i~~~~~agad~v~v 93 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNL---TIGA----PVIQSLRKHT-KAYLDCHLMVTNPSDYVEPLAKAGASGFTF 93 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCB---CBCH----HHHHHHHTTC-CSEEEEEEESSCGGGGHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcch---hhCH----HHHHHHHhhc-CCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 445567789999987653213332210 1111 3444555543 3456666554433 578888899999843
No 412
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=25.02 E-value=2.5e+02 Score=26.26 Aligned_cols=90 Identities=17% Similarity=0.112 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHh-hCCCCCEEEEecCCcc-cHhHHhcCCC---c-EEEcCCCCCHHHHHHHh--CCCeeEEccCCcCcc
Q 015201 272 EPYIREIVSLVRT-KCPETPIVLYINGNGG-FLERMKGTGV---D-VIGLDWTVDMADGRKRL--GNDISVQGNVDPACL 343 (411)
Q Consensus 272 ~Py~k~i~~~i~~-~~~g~~~~~H~CG~~~-~l~~~~e~g~---d-~l~~d~~~di~~~~~~~--g~~~~l~G~vd~~~L 343 (411)
...+++.++.+++ . +.|+++|+-.... .++.+.+.+. . ++++ +.-+..++++.+ |=.+.|.| + .+
T Consensus 153 ~~~F~~ql~lA~e~~--~lPviiH~r~A~~d~l~iL~~~~~~~~~gViH~-FsGs~e~a~~~l~lG~yis~~G-~---~~ 225 (325)
T 3ipw_A 153 LSGYRTLSILHQKYP--YLPFFFHCRKSWSDLCQLNKELGYNGCKGVVHC-FDGTEEEMNQILNEGWDIGVTG-N---SL 225 (325)
T ss_dssp HHHHHHTHHHHHHCT--TCCEEEEEESCHHHHHHHHHHTTCTTSCEEECS-CCCCHHHHHHHHHTTCEEEECS-G---GG
T ss_pred HHHHHHHHHHHHHhh--CCeEEEEeCchHHHHHHHHHhcCCCCCcEEEEE-CCCCHHHHHHHHhcCcEEeeCc-c---cc
Confidence 3556677777777 6 7899999988776 5788887653 2 3443 233666666654 43444444 2 22
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 344 FSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 344 ~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
.+.+. +++++...-.++++-|++..
T Consensus 226 -k~~~~-----~~~v~~iPldrlLlETDaP~ 250 (325)
T 3ipw_A 226 -QSIEL-----LNVMKQIPIERLHIETDCPY 250 (325)
T ss_dssp -SSHHH-----HHHHTTSCGGGEEECCCTTS
T ss_pred -CcHHH-----HHHHHhCCcccEEEeCCCcc
Confidence 33332 23444443378999999864
No 413
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=24.99 E-value=2.3e+02 Score=25.50 Aligned_cols=87 Identities=13% Similarity=0.084 Sum_probs=48.5
Q ss_pred HhHHhcCCCcEEE-cC-----CCCC-HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCC
Q 015201 302 LERMKGTGVDVIG-LD-----WTVD-MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGV 374 (411)
Q Consensus 302 l~~~~e~g~d~l~-~d-----~~~d-i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i 374 (411)
+..+.+.|++..- +. ...+ +.++.+++++++.-+++++|.. +.+++ +++.+ .+=.|+-+.+...-
T Consensus 59 l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~~~v~P~~---~~~eL----~~l~~-~gv~Gi~l~~~~~~ 130 (294)
T 4i6k_A 59 ISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGIAVVQHTT---TFNEL----VNLKA-QGIVGVRLNLFGLN 130 (294)
T ss_dssp HHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEEECCCTTC---CHHHH----HHHHT-TTEEEEEEECTTSC
T ss_pred HHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEEEEeCCcc---cHHHH----HHHHH-CCCcEEEeccCCCC
Confidence 4556666776642 21 1111 5666777887777777888853 33333 34332 22134445543211
Q ss_pred CCCCcHHHHHHHHHHHHhcCCC
Q 015201 375 LVGTPEEAVAHFFEVGKSMKYD 396 (411)
Q Consensus 375 ~~~tp~Eni~a~~~a~~~yg~~ 396 (411)
.++...+.+..+++.++++|..
T Consensus 131 ~~~~~~~~~~~~~~~a~~~glp 152 (294)
T 4i6k_A 131 LPALNTPDWQKFLRNVESLNWQ 152 (294)
T ss_dssp CCCSSSHHHHHHHHHHHHTTCE
T ss_pred CCCcccHHHHHHHHHHHHcCCE
Confidence 2234457888999999998753
No 414
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=24.96 E-value=2.5e+02 Score=24.39 Aligned_cols=96 Identities=20% Similarity=0.346 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhCCCCCEEEEe-cCCcccHhHHhcCCCcEEEcCCCCC-HHHHHHHhCCCeeEEccCCc---------C-
Q 015201 274 YIREIVSLVRTKCPETPIVLYI-NGNGGFLERMKGTGVDVIGLDWTVD-MADGRKRLGNDISVQGNVDP---------A- 341 (411)
Q Consensus 274 y~k~i~~~i~~~~~g~~~~~H~-CG~~~~l~~~~e~g~d~l~~d~~~d-i~~~~~~~g~~~~l~G~vd~---------~- 341 (411)
....+.+.+.+..+....++.+ ||.-.....+.+.|..+..+|.... +..+++++.+-..+.|++.. .
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 115 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVT 115 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSSEEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEE
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCCeEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEE
Confidence 3345555555443222346665 5554466777777888877775433 45566665532333455421 1
Q ss_pred ----cc--CCCHHHHHHHHHHHHHHhCCCC-eEEe
Q 015201 342 ----CL--FSPLPALTDEIQRVVKCAGSRG-HILN 369 (411)
Q Consensus 342 ----~L--~gt~eeV~~ev~~~i~~~~~~g-fIls 369 (411)
.+ ..++++..+..+++.+.+++|| +++.
T Consensus 116 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 116 CMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp ECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred EcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 11 1245777777788877777755 5553
No 415
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=24.96 E-value=3.4e+02 Score=23.56 Aligned_cols=78 Identities=23% Similarity=0.187 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCC-CCCHHHHHHH---------HHHHHHHHHHHHHhhCCCCCEEEEecC--Cc---
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGG-QLPPHMWEQW---------SEPYIREIVSLVRTKCPETPIVLYING--NG--- 299 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~-~iSp~~f~ef---------~~Py~k~i~~~i~~~~~g~~~~~H~CG--~~--- 299 (411)
+...+.++.+.++ +|.+.+.-+... .+....-.+- -.+...++++.+++.. ++|+ |..+ +.
T Consensus 19 ~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv--~~~~~~~~~~~ 94 (248)
T 1geq_A 19 QSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPI--VLMTYYNPIYR 94 (248)
T ss_dssp HHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCE--EEEECHHHHHH
T ss_pred HHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCE--EEEeccchhhh
Confidence 3445566777778 999887634332 2221111100 1233456677777764 5674 4444 32
Q ss_pred ---c-cHhHHhcCCCcEEEcC
Q 015201 300 ---G-FLERMKGTGVDVIGLD 316 (411)
Q Consensus 300 ---~-~l~~~~e~g~d~l~~d 316 (411)
. .++.+.+.|+|.+.+.
T Consensus 95 ~~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 95 AGVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp HCHHHHHHHHHHHTCCEEEET
T ss_pred cCHHHHHHHHHHCCCCEEEEC
Confidence 2 4577778999999874
No 416
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=24.93 E-value=47 Score=29.77 Aligned_cols=39 Identities=13% Similarity=0.147 Sum_probs=28.7
Q ss_pred HHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC
Q 015201 277 EIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW 317 (411)
Q Consensus 277 ~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~ 317 (411)
++++.+|++ |+++......+...+..+.++|+|++..|.
T Consensus 195 ~~v~~~~~~--G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~ 233 (250)
T 3ks6_A 195 GLMAQVQAA--GLDFGCWAAHTPSQITKALDLGVKVFTTDR 233 (250)
T ss_dssp HHHHHHHHT--TCEEEEECCCSHHHHHHHHHHTCSEEEESC
T ss_pred HHHHHHHHC--CCEEEEEeCCCHHHHHHHHHcCCCEEEcCC
Confidence 456778877 677777766555567788888999988775
No 417
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=24.75 E-value=46 Score=31.85 Aligned_cols=47 Identities=6% Similarity=0.091 Sum_probs=32.2
Q ss_pred ccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCC-CCCCCcHHHHHHHHH
Q 015201 342 CLFSPLPALTDEIQRVVKCAGSRGHILNLGHG-VLVGTPEEAVAHFFE 388 (411)
Q Consensus 342 ~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~-i~~~tp~Eni~a~~~ 388 (411)
.+.||||+|.+.+++..+..|-.++++.+..+ ++.....+.++.+.+
T Consensus 306 ~lvGtpe~va~~l~~~~~~~G~d~~~l~~~~~~~~~~~~~~~l~~~a~ 353 (376)
T 2i7g_A 306 LFLGEPELVAEKIIKAHGVFKNDRFLLQMAIGLMPHDQIMRGIELYGT 353 (376)
T ss_dssp CEEESHHHHHHHHHHHHHHHCCSEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred eEEeCHHHHHHHHHHHHHhcCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 35699999999999998887767899876542 332223445555544
No 418
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=24.54 E-value=1.5e+02 Score=29.18 Aligned_cols=75 Identities=11% Similarity=0.006 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC------------CCCHHHHHHHHHHHHHHHHHHHHhhC-CCCCEEEEecCCcc--
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG------------QLPPHMWEQWSEPYIREIVSLVRTKC-PETPIVLYINGNGG-- 300 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~------------~iSp~~f~ef~~Py~k~i~~~i~~~~-~g~~~~~H~CG~~~-- 300 (411)
-+.+.++.+.++|+|+|.+...... -+|-.- .+|...+++..+++.. +++|++ .+|.+.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~----~~~~sl~~i~~v~~~v~~~iPVI--g~GGI~s~ 385 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAK----LKDISTKFICEMYNYTNKQIPII--ASGGIFSG 385 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHH----HHHHHHHHHHHHHHHTTTCSCEE--EESSCCSH
T ss_pred HHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCc----chHHHHHHHHHHHHHcCCCCcEE--EECCCCCH
Confidence 3456678888999999988765332 122221 2233334444444432 256744 556654
Q ss_pred -cHhHHhcCCCcEEEcC
Q 015201 301 -FLERMKGTGVDVIGLD 316 (411)
Q Consensus 301 -~l~~~~e~g~d~l~~d 316 (411)
....++..|+|.+.+.
T Consensus 386 ~DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 386 LDALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHHHTTEEEEEES
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 2445556898888664
No 419
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=24.41 E-value=61 Score=30.75 Aligned_cols=64 Identities=25% Similarity=0.256 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCCEEEEecCCC---------C-CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcC
Q 015201 239 DYIIYQVESGAHCIQIFDSWG---------G-QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGT 308 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~---------~-~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~ 308 (411)
+.++.+++.|++.+.++-+.+ . .++++. ++++++.++++ |.++.+|..+.. -+....+.
T Consensus 176 ~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~--------l~~~~~~A~~~--g~~v~~H~~~~~-~i~~~l~~ 244 (423)
T 3feq_A 176 LAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDE--------IRAIVDEAEAA--NTYVMAHAYTGR-AIARAVRC 244 (423)
T ss_dssp HHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHH--------HHHHHHHHHHT--TCCEEEEEEEHH-HHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHH--------HHHHHHHHHHC--CCeEEEEeCChH-HHHHHHHc
Confidence 344456678998887654311 1 456654 56678888887 789999998543 35566678
Q ss_pred CCcEE
Q 015201 309 GVDVI 313 (411)
Q Consensus 309 g~d~l 313 (411)
|++.+
T Consensus 245 g~~~i 249 (423)
T 3feq_A 245 GVRTI 249 (423)
T ss_dssp TCCEE
T ss_pred CCCEE
Confidence 98877
No 420
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=24.20 E-value=1.5e+02 Score=25.03 Aligned_cols=66 Identities=12% Similarity=0.060 Sum_probs=36.9
Q ss_pred CHHHHHHH---HHHHHHHHHHHHHhhCCCCCEEEEecCCcc-c-HhHHhcCCCcEEEcCCCCCHHHHHHHhCCC
Q 015201 263 PPHMWEQW---SEPYIREIVSLVRTKCPETPIVLYINGNGG-F-LERMKGTGVDVIGLDWTVDMADGRKRLGND 331 (411)
Q Consensus 263 Sp~~f~ef---~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~-l~~~~e~g~d~l~~d~~~di~~~~~~~g~~ 331 (411)
|++.|++| -..|+++.++.+.+.+ . .++-+-+.+. . +.++.+.|+-++-.-...|+..+.+..|.+
T Consensus 52 ~~~~~~~~~~~E~~~l~~~v~kI~~~g--~-nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~ 122 (178)
T 1gml_A 52 REEDFTRILQMEEEYIHQLCEDIIQLK--P-DVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGAR 122 (178)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHTTC--C-SEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhhcC--C-cEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCe
Confidence 44444444 3566677777777663 2 2333444454 3 477777777666443444677777777753
No 421
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=24.01 E-value=4.1e+02 Score=24.09 Aligned_cols=70 Identities=9% Similarity=-0.101 Sum_probs=43.4
Q ss_pred HHHHHHHHHhCCC-EEEEec--CCC--C--CC-CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--c----Hh
Q 015201 238 ADYIIYQVESGAH-CIQIFD--SWG--G--QL-PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--F----LE 303 (411)
Q Consensus 238 ~~~~~~~~e~G~d-~i~i~D--~~~--~--~i-Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~----l~ 303 (411)
.+.++.+.++|+| +|.+.= +.. + +. +|+. ..++++.+++.. ++|+++-...+.+ . .+
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~--------~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~ 179 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEA--------TEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAE 179 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHH--------HHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHH--------HHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHH
Confidence 3445566778999 886642 111 1 21 4432 467788887764 6798887776643 1 35
Q ss_pred HHhcCCCcEEEcC
Q 015201 304 RMKGTGVDVIGLD 316 (411)
Q Consensus 304 ~~~e~g~d~l~~d 316 (411)
.+.+.|+|.+.+.
T Consensus 180 ~~~~~G~d~i~v~ 192 (311)
T 1jub_A 180 ILNQFPLTYVNSV 192 (311)
T ss_dssp HHTTSCCCEEEEC
T ss_pred HHHHcCCcEEEec
Confidence 5667899998653
No 422
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=24.01 E-value=1.2e+02 Score=28.46 Aligned_cols=61 Identities=18% Similarity=0.184 Sum_probs=38.8
Q ss_pred HHHHhCCCEEEEecCCC----------CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcE
Q 015201 243 YQVESGAHCIQIFDSWG----------GQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDV 312 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~----------~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~ 312 (411)
.+.+.|++.+.++-+.+ ..++++. ++++++.+++. |.++..|..+.. -++...+.|++.
T Consensus 174 ~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~--------l~~~~~~A~~~--g~~v~~H~~~~~-~i~~~~~~g~~~ 242 (408)
T 3be7_A 174 KNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEE--------MKAIVDEAHNH--GMKVAAHAHGLI-GIKAAIKAGVDS 242 (408)
T ss_dssp HHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHH--------HHHHHHHHHHT--TCEEEEEECSHH-HHHHHHHHTCSE
T ss_pred HHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHH--------HHHHHHHHHHC--CCEEEEEeCCHH-HHHHHHHcCCCE
Confidence 34567888876653211 1345554 44567778877 788999987643 355566778887
Q ss_pred EE
Q 015201 313 IG 314 (411)
Q Consensus 313 l~ 314 (411)
+.
T Consensus 243 i~ 244 (408)
T 3be7_A 243 VE 244 (408)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 423
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=23.79 E-value=84 Score=28.96 Aligned_cols=41 Identities=17% Similarity=0.331 Sum_probs=32.8
Q ss_pred HHHHHHHHHhhCCCCCEEEEecCCcc----------cHhHHhcCCCcEEEcCC
Q 015201 275 IREIVSLVRTKCPETPIVLYINGNGG----------FLERMKGTGVDVIGLDW 317 (411)
Q Consensus 275 ~k~i~~~i~~~~~g~~~~~H~CG~~~----------~l~~~~e~g~d~l~~d~ 317 (411)
.+++++.+|++ |..++...++... .+..+.+.|+|+|..|.
T Consensus 217 ~~~~V~~ah~~--G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~ 267 (292)
T 3mz2_A 217 VREVIDMLHER--GVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDR 267 (292)
T ss_dssp HHHHHHHHHHT--TBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESC
T ss_pred CHHHHHHHHHC--CCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCC
Confidence 46789999998 6788888887753 35678899999998886
No 424
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=23.31 E-value=4.1e+02 Score=23.91 Aligned_cols=118 Identities=9% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-------
Q 015201 223 PHVLRTLLSHLTQAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI------- 295 (411)
Q Consensus 223 Pe~v~~ll~~~~d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~------- 295 (411)
|..++.+|+.+.++ +|++-++-....+++++.-+| .++.+|++ |+++..=-
T Consensus 25 ~~~~~d~Le~~g~y------------ID~lKfg~Gt~~l~~~~~l~e--------ki~l~~~~--gV~v~~GGTl~E~~~ 82 (251)
T 1qwg_A 25 PKFVEDYLKVCGDY------------IDFVKFGWGTSAVIDRDVVKE--------KINYYKDW--GIKVYPGGTLFEYAY 82 (251)
T ss_dssp HHHHHHHHHHHGGG------------CSEEEECTTGGGGSCHHHHHH--------HHHHHHTT--TCEEEECHHHHHHHH
T ss_pred HHHHHHHHHHhhhh------------cceEEecCceeeecCHHHHHH--------HHHHHHHc--CCeEECCcHHHHHHH
Q ss_pred -cCCcc-cHhHHhcCCCcEEEcCCCC------CHHHHHHHhCCC----eeEEccCCcCc-cCCCHHHHHHHHHHHHHHhC
Q 015201 296 -NGNGG-FLERMKGTGVDVIGLDWTV------DMADGRKRLGND----ISVQGNVDPAC-LFSPLPALTDEIQRVVKCAG 362 (411)
Q Consensus 296 -CG~~~-~l~~~~e~g~d~l~~d~~~------di~~~~~~~g~~----~~l~G~vd~~~-L~gt~eeV~~ev~~~i~~~~ 362 (411)
-|... +++..+++|++++-+.... +..++.++..+. ++=.|.=++.. -.-++++..+.+++.|+++.
T Consensus 83 ~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA 162 (251)
T 1qwg_A 83 SKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGA 162 (251)
T ss_dssp HTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTC
T ss_pred HcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCC
No 425
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=23.16 E-value=2.5e+02 Score=25.52 Aligned_cols=64 Identities=13% Similarity=0.132 Sum_probs=35.7
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc-c-HhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG-F-LERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~-~-l~~~~e~g~d~l~~ 315 (411)
+.++.+.+.||++|.+.++-. |-+=...+++++- +.. ++|++.- ..-.+ . ++.....|+|++.+
T Consensus 76 ~~A~~y~~~GA~~isvltd~~-------~f~Gs~~~l~~ir----~~v-~lPvl~k-dfiid~~qv~~A~~~GAD~VlL 141 (272)
T 3qja_A 76 KLAQAYQDGGARIVSVVTEQR-------RFQGSLDDLDAVR----ASV-SIPVLRK-DFVVQPYQIHEARAHGADMLLL 141 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCGG-------GHHHHHHHHHHHH----HHC-SSCEEEE-SCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEecChh-------hcCCCHHHHHHHH----HhC-CCCEEEC-ccccCHHHHHHHHHcCCCEEEE
Confidence 556788899999998754322 1111122444443 322 5776522 12223 3 56667789988875
No 426
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=23.02 E-value=1.7e+02 Score=27.85 Aligned_cols=51 Identities=4% Similarity=-0.113 Sum_probs=30.9
Q ss_pred CCHHHHHHHHHHHHHHhCC-CCeEEeCCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 345 SPLPALTDEIQRVVKCAGS-RGHILNLGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~-~gfIls~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
.+.++..+++++.++...+ +..-+..+-.-+...++|.++++++.++++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~ 214 (447)
T 4f0r_A 163 SNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDM 214 (447)
T ss_dssp SSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCC
Confidence 4566677777777776543 22222211122445677888888888888874
No 427
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=22.96 E-value=5.4e+02 Score=25.12 Aligned_cols=165 Identities=13% Similarity=0.130 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHhCCceeEEEecccHHHHHHHHHcCCCCccHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 015201 169 LQFVGDSLKILRKEVGEHAAVLGFVGAPWTIATYIVEGGTTRTYTTIKSMCHTAPHVLRTLLSHLTQAIADYIIYQVESG 248 (411)
Q Consensus 169 ~~~~~eaik~l~~~~~~~~~v~~~~~gPft~a~~l~gg~~~~~~e~~l~~l~~~Pe~v~~ll~~~~d~~~~~~~~~~e~G 248 (411)
++...+++++..+++|...-....+.++. +-+++.++...|.|
T Consensus 203 v~~v~eai~ra~~eTGe~k~y~~NiTa~~-------------------------------------~em~~Ra~~a~e~G 245 (430)
T 2d69_A 203 VRKLYRVRDRVEAETGETKEYLINITGPV-------------------------------------NIMEKRAEMVANEG 245 (430)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEECBCCSSH-------------------------------------HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhCCccEEEeecCCCH-------------------------------------HHHHHHHHHHHHcC
Confidence 66778888888899876543344444431 11123344556789
Q ss_pred CCEEEEecC-CCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc----------c-c-H-hHHhcCCCcEEE
Q 015201 249 AHCIQIFDS-WGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG----------G-F-L-ERMKGTGVDVIG 314 (411)
Q Consensus 249 ~d~i~i~D~-~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~----------~-~-l-~~~~e~g~d~l~ 314 (411)
++.+ +.|. .+| +.-...+.+..+.. +.++..|-+|.- + . + ..+.=.|+|.++
T Consensus 246 ~~~~-mvd~~~~G-----------~~a~~~l~~~~r~~--~l~lh~HrA~hga~~r~~~~Gi~~~Vl~Kl~RLaGaD~ih 311 (430)
T 2d69_A 246 GQYV-MIDIVVAG-----------WSALQYMREVTEDL--GLAIHAHRAMHAAFTRNPRHGITMLALAKAARMIGVDQIH 311 (430)
T ss_dssp CCEE-EEEHHHHC-----------HHHHHHHHHHHHHH--TCEEEEECTTTHHHHSCTTSEECHHHHHHHHHHHTCSEEE
T ss_pred CCeE-EEEeeccC-----------hHHHHHHHHHhhcc--CcEEEeccCCccccccCCCCCCcHHHHHHHHHHhCCCccc
Confidence 9876 3342 223 12233334433333 577888877641 1 1 2 233335788776
Q ss_pred cCCC-----CCHHHHH---HHhCCCeeEEccCCcCcc--CC--CHHHHHHHHHHHHHHhCCCCeEEeCCCCC--CCCCcH
Q 015201 315 LDWT-----VDMADGR---KRLGNDISVQGNVDPACL--FS--PLPALTDEIQRVVKCAGSRGHILNLGHGV--LVGTPE 380 (411)
Q Consensus 315 ~d~~-----~di~~~~---~~~g~~~~l~G~vd~~~L--~g--t~eeV~~ev~~~i~~~~~~gfIls~gc~i--~~~tp~ 380 (411)
+... .+..+.. +.+-.+ ||++.+.+. -| ++.. +-.+++.+| .-.|+..|.++ -|+-+-
T Consensus 312 ~gt~~GKleg~~~~~~~~~~~~~q~---w~~~k~~~PV~SGGi~~~~----~p~l~~~~G-~D~vl~~GGG~~gHP~G~a 383 (430)
T 2d69_A 312 TGTAVGKMAGNYEEIKRINDFLLSK---WEHIRPVFPVASGGLHPGL----MPELIRLFG-KDLVIQAGGGVMGHPDGPR 383 (430)
T ss_dssp CCCCCSSSCCCHHHHHHHHHHHHSC---CTTCCCCEEEEESSCCGGG----HHHHHHHHC-SCCEEECHHHHHTCTTCHH
T ss_pred ccCcCCcccCCHHHHHHHHHHHhCc---cccCCCCeEeecCCcchhh----HHHHHHHhC-CcEEEEeCccccCCCCCcH
Confidence 5321 1333222 222111 244444331 11 2222 234556666 35677776554 245567
Q ss_pred HHHHHHHHHHHh
Q 015201 381 EAVAHFFEVGKS 392 (411)
Q Consensus 381 Eni~a~~~a~~~ 392 (411)
...+|+.++...
T Consensus 384 aGa~A~R~A~eA 395 (430)
T 2d69_A 384 AGAKALRDAIDA 395 (430)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 777777766644
No 428
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=22.89 E-value=3.5e+02 Score=23.17 Aligned_cols=82 Identities=13% Similarity=0.074 Sum_probs=48.3
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC-
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW- 317 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~- 317 (411)
+.++..+++|+|++... ..++ .+.+..++. |.+++ ..|.+..-+....+.|+|.+.+-.
T Consensus 74 d~~~~A~~~GAd~v~~~-----~~d~------------~v~~~~~~~--g~~~i-~G~~t~~e~~~A~~~Gad~v~~fpa 133 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSP-----GLLE------------EVAALAQAR--GVPYL-PGVLTPTEVERALALGLSALKFFPA 133 (207)
T ss_dssp HHHHHHHHHTCSEEEES-----SCCH------------HHHHHHHHH--TCCEE-EEECSHHHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEcC-----CCCH------------HHHHHHHHh--CCCEE-ecCCCHHHHHHHHHCCCCEEEEecC
Confidence 55677788999998422 1222 455666666 56644 345554445445678999987632
Q ss_pred -CC-C---HHHHHHHhC-CCeeEEccCCc
Q 015201 318 -TV-D---MADGRKRLG-NDISVQGNVDP 340 (411)
Q Consensus 318 -~~-d---i~~~~~~~g-~~~~l~G~vd~ 340 (411)
.. . ++.+++.++ -.++-.|||++
T Consensus 134 ~~~gG~~~lk~l~~~~~~ipvvaiGGI~~ 162 (207)
T 2yw3_A 134 EPFQGVRVLRAYAEVFPEVRFLPTGGIKE 162 (207)
T ss_dssp TTTTHHHHHHHHHHHCTTCEEEEBSSCCG
T ss_pred ccccCHHHHHHHHhhCCCCcEEEeCCCCH
Confidence 12 2 344555563 24555788876
No 429
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=22.39 E-value=1.1e+02 Score=30.03 Aligned_cols=74 Identities=11% Similarity=0.009 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCC------------CCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCccc--
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQ------------LPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGGF-- 301 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~------------iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~~-- 301 (411)
+.+.++.+.++|+|+|.+......- +|-.- ++|.-.+++..+++..+ .+|++ .+|.+..
T Consensus 285 i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a----~~p~al~~I~~v~~~v~~~iPII--g~GGI~s~e 358 (415)
T 3i65_A 285 KKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAK----LKDISTKFICEMYNYTNKQIPII--ASGGIFSGL 358 (415)
T ss_dssp HHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGG----GHHHHHHHHHHHHHHTTTCSCEE--ECSSCCSHH
T ss_pred HHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCcc----chHHHHHHHHHHHHHhCCCCCEE--EECCCCCHH
Confidence 3456777789999999887654321 22211 12333444444444321 46644 6777652
Q ss_pred -HhHHhcCCCcEEEcC
Q 015201 302 -LERMKGTGVDVIGLD 316 (411)
Q Consensus 302 -l~~~~e~g~d~l~~d 316 (411)
...++..|++.+.+.
T Consensus 359 Da~e~l~aGAd~VqIg 374 (415)
T 3i65_A 359 DALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHTEEEEEES
T ss_pred HHHHHHHcCCCEEEEc
Confidence 333445788887664
No 430
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=22.37 E-value=3.9e+02 Score=24.12 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=64.4
Q ss_pred HHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC-----
Q 015201 243 YQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW----- 317 (411)
Q Consensus 243 ~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~----- 317 (411)
...++|||+|.+.+. .++++.. +++++.+++. |..++ -.+.+..-++...+.|++.+.+..
T Consensus 130 ~A~~~GAD~VlLi~a---~l~~~~l--------~~l~~~a~~l--Gl~~l-vev~t~ee~~~A~~~Gad~IGv~~r~l~~ 195 (272)
T 3qja_A 130 EARAHGADMLLLIVA---ALEQSVL--------VSMLDRTESL--GMTAL-VEVHTEQEADRALKAGAKVIGVNARDLMT 195 (272)
T ss_dssp HHHHTTCSEEEEEGG---GSCHHHH--------HHHHHHHHHT--TCEEE-EEESSHHHHHHHHHHTCSEEEEESBCTTT
T ss_pred HHHHcCCCEEEEecc---cCCHHHH--------HHHHHHHHHC--CCcEE-EEcCCHHHHHHHHHCCCCEEEECCCcccc
Confidence 334689999987554 2445443 4456666666 55433 344444445556678999987632
Q ss_pred -CCCHHHHHHH---hCCC--eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHH
Q 015201 318 -TVDMADGRKR---LGND--ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEV 389 (411)
Q Consensus 318 -~~di~~~~~~---~g~~--~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a 389 (411)
.+|+...++. ++.+ ++.-|||. |+++++ ++++. |-.|+++++.= +-..-|-+.++.++++
T Consensus 196 ~~~dl~~~~~l~~~v~~~~pvVaegGI~------t~edv~----~l~~~-GadgvlVGsal-~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 196 LDVDRDCFARIAPGLPSSVIRIAESGVR------GTADLL----AYAGA-GADAVLVGEGL-VTSGDPRAAVADLVTA 261 (272)
T ss_dssp CCBCTTHHHHHGGGSCTTSEEEEESCCC------SHHHHH----HHHHT-TCSEEEECHHH-HTCSCHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHhCcccCEEEEECCCC------CHHHHH----HHHHc-CCCEEEEcHHH-hCCCCHHHHHHHHHhh
Confidence 3355444443 3322 22345554 466654 44443 33578876541 1222344555555543
No 431
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=22.35 E-value=2.6e+02 Score=23.52 Aligned_cols=77 Identities=16% Similarity=0.114 Sum_probs=40.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CCCEEEEecCCcccHhHHhcCCCcEEEcC
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCP-ETPIVLYINGNGGFLERMKGTGVDVIGLD 316 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~-g~~~~~H~CG~~~~l~~~~e~g~d~l~~d 316 (411)
.+.++.+.++|++.+.+.-. .|. ..+.++.+++..| +.++...++-+........+.|+|.+ +.
T Consensus 25 ~~~~~~~~~~G~~~iev~~~-----~~~---------~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~Gad~i-v~ 89 (205)
T 1wa3_A 25 KEKALAVFEGGVHLIEITFT-----VPD---------ADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGAEFI-VS 89 (205)
T ss_dssp HHHHHHHHHTTCCEEEEETT-----STT---------HHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHTCSEE-EC
T ss_pred HHHHHHHHHCCCCEEEEeCC-----Chh---------HHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcCCCEE-Ec
Confidence 34466777889999866422 121 1223444444322 34333333333334566667899998 65
Q ss_pred CCCC--HHHHHHHhC
Q 015201 317 WTVD--MADGRKRLG 329 (411)
Q Consensus 317 ~~~d--i~~~~~~~g 329 (411)
...+ +.+..+.+|
T Consensus 90 ~~~~~~~~~~~~~~g 104 (205)
T 1wa3_A 90 PHLDEEISQFCKEKG 104 (205)
T ss_dssp SSCCHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHcC
Confidence 4443 344444555
No 432
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=22.32 E-value=75 Score=29.83 Aligned_cols=65 Identities=12% Similarity=0.158 Sum_probs=43.7
Q ss_pred HHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhC---CCCeEEeCCCCCCCCCcHHHHHHHHH
Q 015201 321 MADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAG---SRGHILNLGHGVLVGTPEEAVAHFFE 388 (411)
Q Consensus 321 i~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~---~~gfIls~gc~i~~~tp~Eni~a~~~ 388 (411)
+.++.++|||.+.++-|..|.+ +++.++|.++.-+.++... +.||-..+ -+..-..++|++.+-+
T Consensus 95 v~~c~~kyGDEV~~~pGYf~~m-ylPr~eV~ReMSEAi~~lh~m~~~~YrPks--l~~gflsa~nl~~Lae 162 (449)
T 3lm3_A 95 VVECQKKYGDEVTYFPGYFPAM-YLPRERVNREMSEAIEIISKMVGNGYRPQS--IMGGFLSADNLRYLAE 162 (449)
T ss_dssp HHHHHHHHCCEEEECCCSCHHH-HSCHHHHHHHHHHHHHHHHHHHCTTCCCSE--EECSSCCHHHHHHHHH
T ss_pred HHHHHHHhCCceeecCCCchhh-cCcHHHHHHHHHHHHHHHHHhccCCcCchh--hhhcccCHHHHhhHHh
Confidence 4567789999999997766654 7899999977777666542 23333221 1223467999998754
No 433
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=22.23 E-value=1.8e+02 Score=29.59 Aligned_cols=47 Identities=9% Similarity=0.058 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHhCC-CCeEE-eCCCCCCCCC--cHHHHHHHHHHHHhcC
Q 015201 348 PALTDEIQRVVKCAGS-RGHIL-NLGHGVLVGT--PEEAVAHFFEVGKSMK 394 (411)
Q Consensus 348 eeV~~ev~~~i~~~~~-~gfIl-s~gc~i~~~t--p~Eni~a~~~a~~~yg 394 (411)
+...++++++++..++ ..+|+ +.|+...... ..+.++++++.+|++-
T Consensus 404 ~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~~~~~~~~~~~~l~~~~k~~D 454 (613)
T 3hn3_A 404 HHHMQVMEEVVRRDKNHPAVVMWSVANEPASHLESAGYYLKMVIAHTKSLD 454 (613)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEEEEESCCTTSHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEecccCcccccchHHHHHHHHHHHHHHhC
Confidence 5567788888888776 34444 7777665433 3578888999998874
No 434
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=22.12 E-value=2.4e+02 Score=24.93 Aligned_cols=47 Identities=9% Similarity=0.040 Sum_probs=32.3
Q ss_pred HHHHHHHHhCCCEEEEecCCCC---CCCHHHHHHHHH-----HHHHHHHHHHHhh
Q 015201 239 DYIIYQVESGAHCIQIFDSWGG---QLPPHMWEQWSE-----PYIREIVSLVRTK 285 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~---~iSp~~f~ef~~-----Py~k~i~~~i~~~ 285 (411)
++++...+.|+|.|.+.+.+.+ +-+++.+.++.. |..+.+.+..+++
T Consensus 25 ~~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~ 79 (262)
T 3ivz_A 25 KLIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDT 79 (262)
T ss_dssp HHHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHc
Confidence 3344455679999988886553 234556666655 7888888888876
No 435
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=21.94 E-value=4.8e+02 Score=24.20 Aligned_cols=69 Identities=7% Similarity=0.035 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecC---------Cc----ccH-hHHhcCCCcEE--EcC-------CCC
Q 015201 263 PPHMWEQWSEPYIREIVSLVRTKCPETPIVLYING---------NG----GFL-ERMKGTGVDVI--GLD-------WTV 319 (411)
Q Consensus 263 Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG---------~~----~~l-~~~~e~g~d~l--~~d-------~~~ 319 (411)
+.+...+.+...++++.+.+.++ |+.+.+|.+. +. ..+ ..+.+.+-..+ .+| ...
T Consensus 188 ~~~~~~~~~~~~l~~l~~~A~~~--Gv~l~lE~~~~~~~~~g~~~~~~t~~~~~~l~~~v~~~~vgl~~D~~h~~~~~g~ 265 (367)
T 1tz9_A 188 TEEDLVENLRYFLERVIPVCEEE--NIKMGIHPDDPPWEIFGLPRITKNLADLKRILSLVDSPANGITFCTGSLGADPTN 265 (367)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH--TCEEEECCCSSSSCBTTBCCCTTSHHHHHHHHHHTCSTTEECCEETTHHHHSTTS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHh--CCEEEEEECCCcccccCCCcccCCHHHHHHHHHhcCCCCEEEEEecCchhhhcCC
Confidence 44555678889999999999988 7888898871 21 112 33444553322 222 235
Q ss_pred CHHHHHHHhCCCee
Q 015201 320 DMADGRKRLGNDIS 333 (411)
Q Consensus 320 di~~~~~~~g~~~~ 333 (411)
|+.+..+++++++.
T Consensus 266 d~~~~i~~~~~rI~ 279 (367)
T 1tz9_A 266 DLPTMIREIGHRIN 279 (367)
T ss_dssp CHHHHHHHHGGGCC
T ss_pred CHHHHHHHHhhhEE
Confidence 88888888876654
No 436
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=21.85 E-value=4.8e+02 Score=24.14 Aligned_cols=58 Identities=14% Similarity=0.092 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCC---CCCC---CHHHHHHHHHHHHHHHHHHHHhhCCCCCEEE
Q 015201 234 TQAIADYIIYQVESGAHCIQIFDSW---GGQL---PPHMWEQWSEPYIREIVSLVRTKCPETPIVL 293 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D~~---~~~i---Sp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~ 293 (411)
++..++|.....+.|+..|+..... .+.. .+..|.+--.|-+|++.+.+|+++ .++++
T Consensus 38 ~~~~~~~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g--~~i~~ 101 (338)
T 1z41_A 38 TPFHMAHYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQG--SKIGI 101 (338)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTT--CEEEE
T ss_pred CHHHHHHHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcC--CEEEE
Confidence 3455556656666677665432211 0111 122233334577899999999984 45543
No 437
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=21.83 E-value=1.6e+02 Score=27.41 Aligned_cols=55 Identities=18% Similarity=0.188 Sum_probs=30.7
Q ss_pred CHHHHHHHhCCCeeEEccCCcCcc-CCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHH
Q 015201 320 DMADGRKRLGNDISVQGNVDPACL-FSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEV 389 (411)
Q Consensus 320 di~~~~~~~g~~~~l~G~vd~~~L-~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a 389 (411)
+++++++.+. .++|-.+| +.+++++++.++.+ .+.--|..+| + +.++|++++.++
T Consensus 218 tlde~~eAl~------aGaD~I~LDn~~~~~l~~av~~i----~~~v~ieaSG-G----I~~~~i~~~a~t 273 (298)
T 3gnn_A 218 TLDQLRTALA------HGARSVLLDNFTLDMMRDAVRVT----EGRAVLEVSG-G----VNFDTVRAIAET 273 (298)
T ss_dssp SHHHHHHHHH------TTCEEEEEESCCHHHHHHHHHHH----TTSEEEEEES-S----CSTTTHHHHHHT
T ss_pred CHHHHHHHHH------cCCCEEEECCCCHHHHHHHHHHh----CCCCeEEEEc-C----CCHHHHHHHHHc
Confidence 4566666543 23555455 47788887777655 2222333333 3 346677777765
No 438
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=21.79 E-value=2.4e+02 Score=25.92 Aligned_cols=58 Identities=26% Similarity=0.363 Sum_probs=37.3
Q ss_pred HHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEcC
Q 015201 241 IIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGLD 316 (411)
Q Consensus 241 ~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~d 316 (411)
++...++|+|+|.+ |. ++|+..+ +..+.++. .+|+. .-|.++ .+..+.++|+|.+++.
T Consensus 209 a~eA~~aGaD~I~l-d~----~~~~~~k--------~av~~v~~---~ipi~--AsGGIt~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 209 LEEALEAGADLILL-DN----FPLEALR--------EAVRRVGG---RVPLE--ASGNMTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp HHHHHHHTCSEEEE-ES----CCHHHHH--------HHHHHHTT---SSCEE--EESSCCHHHHHHHHHHTCSEEECT
T ss_pred HHHHHHcCCCEEEE-CC----CCHHHHH--------HHHHHhCC---CCeEE--EEcCCCHHHHHHHHHcCCCEEEEc
Confidence 44456789998844 44 5776644 44444432 35543 346554 6899999999999874
No 439
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=21.75 E-value=6.3e+02 Score=28.04 Aligned_cols=132 Identities=11% Similarity=0.089 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe-------cCC---cc------
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI-------NGN---GG------ 300 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~-------CG~---~~------ 300 (411)
..+.+++..++|+|.+.+++.... ..-+++.++.+++. |..+..-. |+. .+
T Consensus 647 ~~~~i~~a~~~g~d~irif~sl~~-----------~~~~~~~i~~~~~~--g~~v~~~i~~~~~~~d~~r~~~~~~~~~~ 713 (1165)
T 2qf7_A 647 VKYFVRQAAKGGIDLFRVFDCLNW-----------VENMRVSMDAIAEE--NKLCEAAICYTGDILNSARPKYDLKYYTN 713 (1165)
T ss_dssp HHHHHHHHHHHTCCEEEEECTTCC-----------GGGGHHHHHHHHHT--TCEEEEEEECCSCTTCTTSGGGCHHHHHH
T ss_pred HHHHHHHHHhcCcCEEEEEeeHHH-----------HHHHHHHHHHHHhc--cceEEEEEEEeccccCCCCCCCCHHHHHH
Confidence 345778888999999999876432 23455677888887 33333222 221 11
Q ss_pred cHhHHhcCCCcEEEcCC---CCCHHH-------HHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC--CCeEE
Q 015201 301 FLERMKGTGVDVIGLDW---TVDMAD-------GRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS--RGHIL 368 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~d~---~~di~~-------~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~--~gfIl 368 (411)
..+.+.++|++.+++-. ...+.+ +++.++-.+.+++ +.|.----..+...++.+.. .+=|.
T Consensus 714 ~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~i~~H~-------Hnd~GlAvAn~laAv~aGa~~vd~ti~ 786 (1165)
T 2qf7_A 714 LAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREATGLPIHFHT-------HDTSGIAAATVLAAVEAGVDAVDAAMD 786 (1165)
T ss_dssp HHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHCSSCEEEEE-------CBTTSCHHHHHHHHHHTTCSEEEEBCG
T ss_pred HHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhcCCeEEEEE-------CCCCCHHHHHHHHHHHhCCCEEEeccc
Confidence 12556678999998632 233333 3444421122221 22222223444555665443 23333
Q ss_pred eCCCCCCCCCcHHHHHHHHHH
Q 015201 369 NLGHGVLVGTPEEAVAHFFEV 389 (411)
Q Consensus 369 s~gc~i~~~tp~Eni~a~~~a 389 (411)
+.|- -+.+++.|.+.++++.
T Consensus 787 GlGe-~~Gn~~le~vv~~L~~ 806 (1165)
T 2qf7_A 787 ALSG-NTSQPCLGSIVEALSG 806 (1165)
T ss_dssp GGCS-BTSCCBHHHHHHHHTT
T ss_pred ccCC-CccchhHHHHHHHHHh
Confidence 3332 2567888887777764
No 440
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=21.71 E-value=4.7e+02 Score=23.97 Aligned_cols=112 Identities=11% Similarity=0.077 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC--CCCHHHHHH--HhCCCeeEEccCCcCccC
Q 015201 269 QWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW--TVDMADGRK--RLGNDISVQGNVDPACLF 344 (411)
Q Consensus 269 ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~--~~di~~~~~--~~g~~~~l~G~vd~~~L~ 344 (411)
+-.++.++++. ++. |+|++- .-=+...++.+.++ +|.+.+.. ..+..-+++ ..+..+.+--| +.
T Consensus 77 ~~GL~~L~~~~---~e~--Glp~~T-ev~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G-----~~ 144 (285)
T 3sz8_A 77 DEGLKIFAEVK---ARF--GVPVIT-DVHEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKP-----QF 144 (285)
T ss_dssp HHHHHHHHHHH---HHH--CCCEEE-ECCSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECC-----TT
T ss_pred HHHHHHHHHHH---Hhc--CCeEEE-EeCCHHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCC-----CC
Confidence 44455555555 444 677542 22233357888888 99997743 234443333 23332222211 12
Q ss_pred CCHHHHHHHHHHHHHHhCCCCeEEe-CCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 345 SPLPALTDEIQRVVKCAGSRGHILN-LGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~~gfIls-~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
.|++|+...+..+.+. |...+||. -|-+.+.+...-|++++-..-+.+
T Consensus 145 ~t~~ei~~ave~i~~~-Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~ 193 (285)
T 3sz8_A 145 MSPTQLKHVVSKCGEV-GNDRVMLCERGSSFGYDNLVVDMLGFRQMAETT 193 (285)
T ss_dssp SCGGGTHHHHHHHHHT-TCCCEEEEECCEECSSSCEECCTTHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHc-CCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhC
Confidence 4889998888877665 34455553 222233332112455555444444
No 441
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=21.66 E-value=1.8e+02 Score=26.22 Aligned_cols=80 Identities=6% Similarity=-0.060 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cHhHHhcCCCcEEEc
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FLERMKGTGVDVIGL 315 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l~~~~e~g~d~l~~ 315 (411)
.++++.+.+.|++.+.+.|-.+ .+ .++++.+.+.. ..|+.+ .|... .++.+. .|++.+.+
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~--~n------------~~~i~~i~~~~-~~pv~v--gGGir~~~~~~~l-~Ga~~Vii 102 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP--NN------------DDAAREALQES-PQFLQV--GGGINDTNCLEWL-KWASKVIV 102 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS--SC------------HHHHHHHHHHS-TTTSEE--ESSCCTTTHHHHT-TTCSCEEE
T ss_pred HHHHHHHHHcCCCEEEEEeCCC--CC------------HHHHHHHHhcC-CceEEE--eCCCCHHHHHHHh-cCCCEEEE
Confidence 4677788899999998877444 11 22233333333 467665 44433 466677 99998876
Q ss_pred CCC--CC--------HHHHHHHhC-CCeeEE
Q 015201 316 DWT--VD--------MADGRKRLG-NDISVQ 335 (411)
Q Consensus 316 d~~--~d--------i~~~~~~~g-~~~~l~ 335 (411)
+.. .| +.++.+.+| +++++.
T Consensus 103 gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~ 133 (260)
T 2agk_A 103 TSWLFTKEGHFQLKRLERLTELCGKDRIVVD 133 (260)
T ss_dssp CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEE
T ss_pred CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEE
Confidence 432 13 445666788 555443
No 442
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=21.64 E-value=3.3e+02 Score=26.70 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-cc------------cH
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-GG------------FL 302 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~~------------~l 302 (411)
-.++.++++.+ |||.|++- .+.-++++.++| .+.++...|. .++...|.- .+ +.
T Consensus 272 eAI~Ra~AY~~-GAD~if~E---~~~~~~eei~~f--------~~~v~~~~P~-~~l~~~~sPsfnw~~~~~~~~~~~f~ 338 (439)
T 3i4e_A 272 QAISRGLAYAP-YADLIWCE---TGKPDLEYAKKF--------AEAIHKQFPG-KLLSYNCSPSFNWKKNLDDATIAKFQ 338 (439)
T ss_dssp HHHHHHHHHTT-TCSEEEEC---CSSCCHHHHHHH--------HHHHHHHSTT-CEEEEECCSSSCHHHHSCHHHHHTHH
T ss_pred HHHHHHHHHHh-hCCEEEec---CCCCCHHHHHHH--------HHHhcccCCc-eEEeeCCCCCCcCcccCCHHHHHHHH
Confidence 34455667778 99999761 234577777665 4555544443 344455542 11 14
Q ss_pred hHHhcCCCcEEEc
Q 015201 303 ERMKGTGVDVIGL 315 (411)
Q Consensus 303 ~~~~e~g~d~l~~ 315 (411)
+++.++|+....+
T Consensus 339 ~eL~~lGv~~v~~ 351 (439)
T 3i4e_A 339 KELGAMGYKFQFI 351 (439)
T ss_dssp HHHHHHTCCEEEE
T ss_pred HHHHHcCCeEEEe
Confidence 5677777777654
No 443
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=21.25 E-value=4.1e+02 Score=23.16 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=43.8
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCc--c-cHhHHhcCCCcEEEc
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNG--G-FLERMKGTGVDVIGL 315 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~--~-~l~~~~e~g~d~l~~ 315 (411)
+.++++++.|++.+.+... ++.. .+.++.+++..++. ....|.. . .++...+.|.|.++.
T Consensus 33 ~~~~al~~gGv~~iel~~k-----~~~~---------~~~i~~l~~~~~~l---~vgaGtvl~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 33 PLADTLAKNGLSVAEITFR-----SEAA---------ADAIRLLRANRPDF---LIAAGTVLTAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp HHHHHHHHTTCCEEEEETT-----STTH---------HHHHHHHHHHCTTC---EEEEESCCSHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHcCCCEEEEecc-----CchH---------HHHHHHHHHhCcCc---EEeeCcEeeHHHHHHHHHCCCCEEEE
Confidence 5667888999999988643 2211 12334343333332 2222332 2 467777889999876
Q ss_pred CC-CCCHHHHHHHhCCCeeEEc
Q 015201 316 DW-TVDMADGRKRLGNDISVQG 336 (411)
Q Consensus 316 d~-~~di~~~~~~~g~~~~l~G 336 (411)
.. ..++.+..+++|... +.|
T Consensus 96 p~~d~~v~~~ar~~g~~~-i~G 116 (224)
T 1vhc_A 96 PGLNPKIVKLCQDLNFPI-TPG 116 (224)
T ss_dssp SSCCHHHHHHHHHTTCCE-ECE
T ss_pred CCCCHHHHHHHHHhCCCE-Eec
Confidence 43 223334445577543 445
No 444
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.09 E-value=1.3e+02 Score=26.01 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=51.0
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCCC
Q 015201 239 DYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDWT 318 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~~ 318 (411)
+.++..++.|++.|.+-+.. ++++.+.+.+ +++. +.. +.+++++ ..++...+.|+|++++...
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~---~~~~~~~~~i----~~l~---~~~--~~~livn-----d~~~~A~~~gadgvhl~~~ 79 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE---TPAMYSERLL----TLIP---EKY--HRRIVTH-----EHFYLKEEFNLMGIHLNAR 79 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS---CCHHHHHHHH----HHSC---GGG--GGGEEES-----SCTTHHHHTTCSEEECCSS
T ss_pred HHHHHHHHCCCCEEEEccCC---CCHHHHHHHH----HHHH---HHh--CCeEEEe-----CCHHHHHHcCCCEEEECcc
Confidence 45667789999999887543 5677666642 3333 222 4567764 3456677888998887421
Q ss_pred ----------------CCHHHHHHH-hCCCeeEEccCC
Q 015201 319 ----------------VDMADGRKR-LGNDISVQGNVD 339 (411)
Q Consensus 319 ----------------~di~~~~~~-~g~~~~l~G~vd 339 (411)
.+..++.+. .|-+....|.+-
T Consensus 80 ~~~~~~~~~~~ig~s~~t~~e~~~A~~GaDyv~~g~vf 117 (210)
T 3ceu_A 80 NPSEPHDYAGHVSCSCHSVEEVKNRKHFYDYVFMSPIY 117 (210)
T ss_dssp SCSCCTTCCSEEEEEECSHHHHHTTGGGSSEEEECCCC
T ss_pred ccccccccCCEEEEecCCHHHHHHHhhCCCEEEECCcC
Confidence 245555422 455566666653
No 445
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=20.97 E-value=4.7e+02 Score=23.68 Aligned_cols=134 Identities=12% Similarity=0.054 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEec---CCCCC---CC------------HHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe
Q 015201 234 TQAIADYIIYQVESGAHCIQIFD---SWGGQ---LP------------PHMWEQWSEPYIREIVSLVRTKCPETPIVLYI 295 (411)
Q Consensus 234 ~d~~~~~~~~~~e~G~d~i~i~D---~~~~~---iS------------p~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~ 295 (411)
.+.+.+.++...+.|++.| +.. +++.+ .+ .+...+.+...++++.+.++++ |+.+.+|.
T Consensus 108 ~~~~~~~i~~A~~lG~~~v-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~ 184 (335)
T 2qw5_A 108 LEYLKSRVDITAALGGEIM-MGPIVIPYGVFPTTDFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEIK--KVKLAIEP 184 (335)
T ss_dssp HHHHHHHHHHHHHTTCSEE-EECCSSCTTCCCBCTTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEE-eccccCccccccCCcccccccccchhhhHHHHHHHHHHHHHHHHHHHHHc--CCEEEEee
Confidence 3445566667778899998 431 12221 12 3444566788899999999888 68889988
Q ss_pred cCC----c----ccH-hHHhcCCCcE--EEcC------CCCCHH---HHHHHhC--CCeeEEccCCcC-c-c-CCCHHHH
Q 015201 296 NGN----G----GFL-ERMKGTGVDV--IGLD------WTVDMA---DGRKRLG--NDISVQGNVDPA-C-L-FSPLPAL 350 (411)
Q Consensus 296 CG~----~----~~l-~~~~e~g~d~--l~~d------~~~di~---~~~~~~g--~~~~l~G~vd~~-~-L-~gt~eeV 350 (411)
.+. . ..+ +.+.+++-+. +.+| ...|+. +.-++++ +++..+=-=|.. . + .|+.+ .
T Consensus 185 ~~~~~~~~~~t~~~~~~ll~~v~~~~vgl~~D~~H~~~~g~d~~~~~~~l~~~~~~~ri~~vHlkD~~~~~~G~G~id-~ 263 (335)
T 2qw5_A 185 ITHWETPGPNKLSQLIEFLKGVKSKQVGVVIDSAHEILDGEGPEIFKTQVEYLAQQGRLHYVQVSPPDRGALHTSWLP-W 263 (335)
T ss_dssp CCTTTCSSCCSHHHHHHHHTTCCCTTEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSCSSSSCCC-H
T ss_pred CCcccccccCCHHHHHHHHHhcCCCCeeEEEecccchhccCChHHHHHHHHHhCCcCCEEEEEECCCCCCCCCCCCcC-H
Confidence 642 1 112 3333455332 3333 134777 6667777 765442111222 1 2 24432 3
Q ss_pred HHHHHHHHHHhCCCCeEEeCCC
Q 015201 351 TDEIQRVVKCAGSRGHILNLGH 372 (411)
Q Consensus 351 ~~ev~~~i~~~~~~gfIls~gc 372 (411)
+.+.+.|...-.|-+++-.-+
T Consensus 264 -~~i~~~L~~gy~G~~~~E~~~ 284 (335)
T 2qw5_A 264 -KSFLTPIVKVYDGPIAVEIFN 284 (335)
T ss_dssp -HHHHHHHHHHCCSCEEECCCC
T ss_pred -HHHHHHHHccCCccEEEEecC
Confidence 334445555224566665443
No 446
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=20.84 E-value=5.5e+02 Score=25.95 Aligned_cols=53 Identities=17% Similarity=0.166 Sum_probs=37.0
Q ss_pred cHhHHhcCCCcEEEcCCCC--------CHHHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCC
Q 015201 301 FLERMKGTGVDVIGLDWTV--------DMADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGS 363 (411)
Q Consensus 301 ~l~~~~e~g~d~l~~d~~~--------di~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~ 363 (411)
..+.+.+.|+|++-+|... -++.+|+.+.+-..+.|||-+ .| .++.+++.+.+
T Consensus 285 R~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT------~e----~a~~Li~aGAD 345 (556)
T 4af0_A 285 RLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVT------RE----QAAQLIAAGAD 345 (556)
T ss_dssp HHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECS------HH----HHHHHHHHTCS
T ss_pred HHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccC------HH----HHHHHHHcCCC
Confidence 4677889999999887432 256778888877777888865 43 44556666543
No 447
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=20.82 E-value=2e+02 Score=24.30 Aligned_cols=65 Identities=9% Similarity=0.078 Sum_probs=37.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEec-CCc-c-cHhHHhcCCCcEEE
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYIN-GNG-G-FLERMKGTGVDVIG 314 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~C-G~~-~-~l~~~~e~g~d~l~ 314 (411)
++.++++.+ |++.+-+.++. |..+.. ++++.+++..++.|+++|.- .++ . .++.+.+.|+|.++
T Consensus 16 ~~~~~~~~~-~v~~iev~~~~--------~~~~g~----~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~v~ 82 (207)
T 3ajx_A 16 LELAGKVAE-YVDIIELGTPL--------IKAEGL----SVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADLVT 82 (207)
T ss_dssp HHHHHHHGG-GCSEEEECHHH--------HHHHCT----HHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhhc-cCCEEEECcHH--------HHhhCH----HHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCEEE
Confidence 344445544 77887664432 222332 34555555544567877664 342 2 36788889999986
Q ss_pred c
Q 015201 315 L 315 (411)
Q Consensus 315 ~ 315 (411)
+
T Consensus 83 v 83 (207)
T 3ajx_A 83 V 83 (207)
T ss_dssp E
T ss_pred E
Confidence 5
No 448
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=20.80 E-value=4.2e+02 Score=25.39 Aligned_cols=40 Identities=15% Similarity=0.226 Sum_probs=24.0
Q ss_pred HHHHHHhCCCCeEEeCCCCCC--CCCcHHHHHHHHHHHHhcCC
Q 015201 355 QRVVKCAGSRGHILNLGHGVL--VGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 355 ~~~i~~~~~~gfIls~gc~i~--~~tp~Eni~a~~~a~~~yg~ 395 (411)
-++++.+|. -+||..|.++- |+-+-+..+|+.+++..+.+
T Consensus 328 p~l~~~~G~-Dvvl~~GGG~~gHP~G~~aGa~a~rqA~ea~~~ 369 (378)
T 3qfw_A 328 NELLRFYGQ-DVMLLIGGSLLASRERLTEQASRFVNKVADYGQ 369 (378)
T ss_dssp HHHHHHHCS-SCEEEC---------CHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHhCC-cEEEecCccccCCCCCcHHHHHHHHHHHHHHHH
Confidence 344555553 67888887773 56688999999998887754
No 449
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=20.80 E-value=5e+02 Score=23.96 Aligned_cols=122 Identities=9% Similarity=0.024 Sum_probs=58.1
Q ss_pred CCCCHHHHH----HHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcCC--CCCHHHHHH--HhCCC
Q 015201 260 GQLPPHMWE----QWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLDW--TVDMADGRK--RLGND 331 (411)
Q Consensus 260 ~~iSp~~f~----ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d~--~~di~~~~~--~~g~~ 331 (411)
.--||.-|+ +-.++.++++. ++. |+|++-- -=+...++.+.++ +|.+.+.. ..+..-+++ ..+..
T Consensus 85 pRTs~~sf~Glg~~~GL~~L~~~~---~e~--GLpv~Te-v~D~~~v~~l~~~-vd~lkIgA~~~~n~~LLr~va~~gkP 157 (298)
T 3fs2_A 85 NRTSLKAARGIGLEKALEVFSDLK---KEY--GFPVLTD-IHTEEQCAAVAPV-VDVLQIPAFLCRQTDLLIAAARTGRV 157 (298)
T ss_dssp C---------CCHHHHHHHHHHHH---HHH--CCCEEEE-CCSHHHHHHHTTT-CSEEEECGGGTTCHHHHHHHHHTTSE
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHH---Hhc--CCeEEEE-eCCHHHHHHHHhh-CCEEEECccccCCHHHHHHHHccCCc
Confidence 456677776 45555555555 444 6775421 1122257888888 99997753 235444443 23322
Q ss_pred eeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEe-CCCCCCCCCcHHHHHHHHHHHHhcCC
Q 015201 332 ISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILN-LGHGVLVGTPEEAVAHFFEVGKSMKY 395 (411)
Q Consensus 332 ~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls-~gc~i~~~tp~Eni~a~~~a~~~yg~ 395 (411)
+.+--| +..|++|+...+..+.+. |...+||. -|-+.+.+...-|++++-. .++++.
T Consensus 158 VilK~G-----ms~t~~ei~~ave~i~~~-Gn~~iiL~erg~~y~~~~~~vdl~~i~~-lk~~~~ 215 (298)
T 3fs2_A 158 VNVKKG-----QFLAPWDMKNVLAKITES-GNPNVLATERGVSFGYNTLVSDMRALPI-MAGLGA 215 (298)
T ss_dssp EEEECC-----TTCCGGGHHHHHHHHHTT-TCCCEEEEECCEECSSSCEECCTTHHHH-HHTTTS
T ss_pred EEEeCC-----CCCCHHHHHHHHHHHHHc-CCCeEEEEECCCCCCCCCCccCHHHHHH-HHHcCC
Confidence 222111 125899998888777664 34455553 2222333332124666544 344653
No 450
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=20.62 E-value=3.8e+02 Score=24.03 Aligned_cols=84 Identities=15% Similarity=0.055 Sum_probs=54.3
Q ss_pred HHHHHHHHhCCCEEEEecCC---C-CCCCHHHHHHHHHHHHHHHHHHHHhhCCCCC--EEEEecC----C------cc-c
Q 015201 239 DYIIYQVESGAHCIQIFDSW---G-GQLPPHMWEQWSEPYIREIVSLVRTKCPETP--IVLYING----N------GG-F 301 (411)
Q Consensus 239 ~~~~~~~e~G~d~i~i~D~~---~-~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~--~~~H~CG----~------~~-~ 301 (411)
+.++.++++|+.+|.+-|.. + .+++.+.+ .+-++.+.+...+. |+| ++-|+.. . .. .
T Consensus 97 ~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~----~~~I~a~~~a~~~~--g~~~~v~aRtd~~~~g~~~~~~~~~~a 170 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVEDVVHSEGKRVREAQEH----ADYIAAARQAADVA--GVDVVINGRTDAVKLGADVFEDPMVEA 170 (255)
T ss_dssp HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHH----HHHHHHHHHHHHHH--TCCCEEEEEECHHHHCTTTSSSHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCcccCHHHH----HHHHHHHHHHHHhc--CCCeEEEEEechhhccCCcchHHHHHH
Confidence 44556778999999887753 2 27777654 45667777776665 355 6667663 1 11 2
Q ss_pred Hh---HHhcCCCcEEEcCCCCCHHHHHHHh
Q 015201 302 LE---RMKGTGVDVIGLDWTVDMADGRKRL 328 (411)
Q Consensus 302 l~---~~~e~g~d~l~~d~~~di~~~~~~~ 328 (411)
|+ .+.+.|+|++-++...+..++++..
T Consensus 171 i~ra~a~~eAGAd~i~~e~~~~~~~~~~i~ 200 (255)
T 2qiw_A 171 IKRIKLMEQAGARSVYPVGLSTAEQVERLV 200 (255)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEcCCCCHHHHHHHH
Confidence 33 3557899999887655666666654
No 451
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=20.51 E-value=1.1e+02 Score=29.02 Aligned_cols=45 Identities=13% Similarity=0.211 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHHHhc
Q 015201 345 SPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVGKSM 393 (411)
Q Consensus 345 gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~~~y 393 (411)
+++++-.+.++++.+++..-||..=.+|+|| .+-+..+.+.+++|
T Consensus 58 ~~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~----~~l~~~~~~~~~~F 102 (356)
T 1gp6_A 58 DDEKIRENCIEELKKASLDWGVMHLINHGIP----ADLMERVKKAGEEF 102 (356)
T ss_dssp SCHHHHHHHHHHHHHHHHHTSEEEEESCSCC----HHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHhCCEEEEeCCCCC----HHHHHHHHHHHHHH
Confidence 5666555555666666655587777788876 67888888888876
No 452
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=20.44 E-value=3.1e+02 Score=25.46 Aligned_cols=74 Identities=19% Similarity=0.298 Sum_probs=45.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCCC--------CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHh----HH
Q 015201 238 ADYIIYQVESGAHCIQIFDSWGG--------QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLE----RM 305 (411)
Q Consensus 238 ~~~~~~~~e~G~d~i~i~D~~~~--------~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~----~~ 305 (411)
.++++.+++.|.|+|++ |..-+ -.+.+..++=..-+++.|.+.+|+++|+.. ++-.-|. ..++ .+
T Consensus 125 ~~rl~~~~~kG~DGvfl-DnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~-ii~nNG~-~i~~~d~~~l 201 (309)
T 2aam_A 125 FSYLDRVIDQGFKGIYL-DRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDML-IIPQNGE-NILDFDDGQL 201 (309)
T ss_dssp HHHHHHHHHTTCSEEEE-ECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCE-EEEBSCG-GGGGGCCSHH
T ss_pred HHHHHHHHHcCCCeEee-cccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcE-EEEecCH-HhhcccHhHH
Confidence 34456777899999854 54321 233345667788899999999999976653 3333332 2445 44
Q ss_pred hcCCCcEEEc
Q 015201 306 KGTGVDVIGL 315 (411)
Q Consensus 306 ~e~g~d~l~~ 315 (411)
... +|.+..
T Consensus 202 ~~~-id~v~~ 210 (309)
T 2aam_A 202 AST-VSGWAV 210 (309)
T ss_dssp HHH-CSEEEE
T ss_pred Hhh-cCEEEe
Confidence 443 565544
No 453
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=20.33 E-value=4.2e+02 Score=22.94 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=47.7
Q ss_pred HHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEe----cCCcc-c----HhHHhcCCCcE
Q 015201 242 IYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYI----NGNGG-F----LERMKGTGVDV 312 (411)
Q Consensus 242 ~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~----CG~~~-~----l~~~~e~g~d~ 312 (411)
+..++.|+|.|-+.=+++. .+.--.+...+.++.+++.. + |+++-. ++-.. . .....+.|+|.
T Consensus 77 ~~A~~~Gad~Id~viN~g~------~~~~~~~~~~~~i~~v~~a~-~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 77 VEAVRDGAQELDIVWNLSA------FKSEKYDFVVEELKEIFRET-P-SAVHKVIVETPYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp HHHHHTTCSEEEEECCHHH------HHTTCHHHHHHHHHHHHHTC-T-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCCCEEEEEecHHH------HhcCChHHHHHHHHHHHHHh-c-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCE
Confidence 5567899999875333332 11111234445566666654 2 444433 44321 1 24556789999
Q ss_pred EEcCCC--------CCHHHHHHHhCCCeeE--EccCC
Q 015201 313 IGLDWT--------VDMADGRKRLGNDISV--QGNVD 339 (411)
Q Consensus 313 l~~d~~--------~di~~~~~~~g~~~~l--~G~vd 339 (411)
+..... -++..+++..++++.+ .|||.
T Consensus 149 I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~ 185 (225)
T 1mzh_A 149 IKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIR 185 (225)
T ss_dssp EECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCC
T ss_pred EEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCC
Confidence 954321 1356667766655444 45554
No 454
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=20.27 E-value=2.5e+02 Score=27.56 Aligned_cols=69 Identities=10% Similarity=0.037 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCC-cc------------c
Q 015201 235 QAIADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGN-GG------------F 301 (411)
Q Consensus 235 d~~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~-~~------------~ 301 (411)
+..++.++++.+ |||.|++- .+.-++++.++| .+.++...|.. +....|.- .+ +
T Consensus 266 d~AI~Ra~AY~~-GAD~If~e---~~~~~~eei~~f--------~~~v~~~~P~~-~L~~~~sPsfnw~~~~~~~~~~~f 332 (433)
T 3eol_A 266 EPCIARAIAYAP-YCDLIWME---TSKPDLAQARRF--------AEAVHKAHPGK-LLAYNCSPSFNWKKNLDDATIAKF 332 (433)
T ss_dssp HHHHHHHHHHGG-GCSEEEEC---CSSCCHHHHHHH--------HHHHHHHSTTC-CEEEECCSSSCHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCEEEEe---CCCCCHHHHHHH--------HHHhcccCCCc-ccccCCCCCCcccccCChhHHhHH
Confidence 344555667778 99999762 223477777665 45665544443 34445542 11 1
Q ss_pred HhHHhcCCCcEEEcC
Q 015201 302 LERMKGTGVDVIGLD 316 (411)
Q Consensus 302 l~~~~e~g~d~l~~d 316 (411)
.+++.++|+..+.+.
T Consensus 333 ~~eLa~lGv~~v~~~ 347 (433)
T 3eol_A 333 QRELGAMGYKFQFIT 347 (433)
T ss_dssp HHHHHHHTEEEEEET
T ss_pred HHHHHHcCCeEEEeC
Confidence 467778888877654
No 455
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=20.24 E-value=3.3e+02 Score=25.97 Aligned_cols=69 Identities=20% Similarity=0.174 Sum_probs=39.7
Q ss_pred HHHHHhCCCEEEEecCCCCCCCHHH-----HHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEE
Q 015201 242 IYQVESGAHCIQIFDSWGGQLPPHM-----WEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIG 314 (411)
Q Consensus 242 ~~~~e~G~d~i~i~D~~~~~iSp~~-----f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~ 314 (411)
+.+.+.|++.+-++.+ +++++|.. ...+-...++++++.++++ |+++.+|..+.. .+....+.|.+.+.
T Consensus 192 ~~~~~~g~~~ik~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~--g~~v~~H~~~~~-~i~~~~~~G~~~i~ 265 (458)
T 2p9b_A 192 AQNLKAGVNAIKIAAT-GGVTDAQEIGEAGSPQMSVEQMRAICDEAHQY--GVIVGAHAQSPE-GVRRSLLAGVDTIE 265 (458)
T ss_dssp HHHHHTTCSCEEEECS-CCTTSCCCC------CCCHHHHHHHHHHHHHT--TCCEEEEECSHH-HHHHHHHHTCSEEE
T ss_pred HHHHHcCCCEEEEEec-CCcCCCCccCCCCCCcCCHHHHHHHHHHHHHC--CCeEEEEeCCHH-HHHHHHHcCCCEEE
Confidence 3445678887765532 12223220 0112233466778888887 788999987642 34555667887763
No 456
>2h9a_A Carbon monoxide dehydrogenase corrinoid/iron- sulfur protein, gamma subunit; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_A*
Probab=20.15 E-value=3.9e+02 Score=26.22 Aligned_cols=119 Identities=15% Similarity=0.176 Sum_probs=69.0
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCc---EE-EcCCC--CCH
Q 015201 248 GAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVD---VI-GLDWT--VDM 321 (411)
Q Consensus 248 G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d---~l-~~d~~--~di 321 (411)
++|.|.+... --.|+.+ +++++.+++.. ++|+.+- -+...++.-.+.+.+ .+ ++... -.+
T Consensus 127 ~aD~I~l~~~---~~dpe~~--------~~~Vk~V~e~~-dvPlsID--~dp~vleaale~~~d~~pLIns~t~en~~~~ 192 (445)
T 2h9a_A 127 SVNLVALKGS---SQDAATF--------AKAVATAREVT-DLPFILI--GTPEQLAAALETEGANNPLLYAATADNYEQM 192 (445)
T ss_dssp ECCEEEEECT---TCCHHHH--------HHHHHHHHHHC-CSCEEEE--SCHHHHHHHHHHHGGGCCEEEEECTTTHHHH
T ss_pred cCcEEEEeCC---CCCHHHH--------HHHHHHHHHhc-CCCEEEE--CCHHHHHHHHHhcCCCCCEEEECCHHHHHHH
Confidence 3999877652 2355444 55666666654 6787654 333357777777777 55 44432 235
Q ss_pred HHHHHHhCCCeeEEccCCcCccCCCHHHHHHHHHHHHHHhCCCCeEEeCCCCCCCCCcHHHHHHHHHHH
Q 015201 322 ADGRKRLGNDISVQGNVDPACLFSPLPALTDEIQRVVKCAGSRGHILNLGHGVLVGTPEEAVAHFFEVG 390 (411)
Q Consensus 322 ~~~~~~~g~~~~l~G~vd~~~L~gt~eeV~~ev~~~i~~~~~~gfIls~gc~i~~~tp~Eni~a~~~a~ 390 (411)
..+.+.++-.+++.+. +-+..++-++++.+ .|=...||.|+.+- .+-..+|++.+.+.+
T Consensus 193 ~~la~~y~~~vV~~~~--------~l~~l~~lv~~a~~-~Gi~~IiLDP~~~~-~~~sl~~~~~IR~~a 251 (445)
T 2h9a_A 193 VELAKKYNVPLTVSAK--------GLDALAELVQKITA-LGYKNLILDPQPEN-ISEGLFYQTQIRRLA 251 (445)
T ss_dssp HHHHHHHTCCEEEECS--------SHHHHHHHHHHHHH-TTCCCEEEECCCSS-HHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCeEEEEcC--------CHHHHHHHHHHHHH-CCCCcEEEcCCchh-HHHHHHHHHHHHHhh
Confidence 5556778877777663 33433333333333 32137899998632 223567888777765
No 457
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=20.13 E-value=3.6e+02 Score=24.93 Aligned_cols=84 Identities=10% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcccHhHHhcCCCcEEEcC
Q 015201 237 IADYIIYQVESGAHCIQIFDSWGGQLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGGFLERMKGTGVDVIGLD 316 (411)
Q Consensus 237 ~~~~~~~~~e~G~d~i~i~D~~~~~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~~l~~~~e~g~d~l~~d 316 (411)
..+.++.++++|+|+|.+.-. .| .++++.+++. +++ +++.+.+......+.+.|+|.+.++
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g--------------~p--~~~~~~l~~~--g~~-v~~~v~s~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAG--------------NP--TKYIRELKEN--GTK-VIPVVASDSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESS--------------CC--HHHHHHHHHT--TCE-EEEEESSHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC--------------Cc--HHHHHHHHHc--CCc-EEEEcCCHHHHHHHHHcCCCEEEEE
Q ss_pred CCCC------------HHHHHHHhCCCeeEEccCC
Q 015201 317 WTVD------------MADGRKRLGNDISVQGNVD 339 (411)
Q Consensus 317 ~~~d------------i~~~~~~~g~~~~l~G~vd 339 (411)
...- +.++++.++-.+...|||.
T Consensus 152 g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~ 186 (326)
T 3bo9_A 152 GMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIA 186 (326)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC
T ss_pred CCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCC
No 458
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=20.10 E-value=71 Score=29.31 Aligned_cols=68 Identities=13% Similarity=0.092 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCCCEEEEecCCcc--cH---hHHhcC
Q 015201 236 AIADYIIYQVESGAHCIQIFDSWGG--QLPPHMWEQWSEPYIREIVSLVRTKCPETPIVLYINGNGG--FL---ERMKGT 308 (411)
Q Consensus 236 ~~~~~~~~~~e~G~d~i~i~D~~~~--~iSp~~f~ef~~Py~k~i~~~i~~~~~g~~~~~H~CG~~~--~l---~~~~e~ 308 (411)
.+.++++.+++. +|++.+..+.|. .+|.++.++.+ +.+.+ .+|++.++.++.. -+ ....+.
T Consensus 20 ~l~~lv~~li~~-v~gl~v~GttGE~~~Ls~~Er~~v~--------~~~~~---rvpviaGvg~~~t~~ai~la~~A~~~ 87 (283)
T 2pcq_A 20 AFRELAQALEPL-VDGLLVYGSNGEGVHLTPEERARGL--------RALRP---RKPFLVGLMEETLPQAEGALLEAKAA 87 (283)
T ss_dssp HHHHHHHHHGGG-SSCCEETCTTTTGGGSCHHHHHHHH--------HTCCC---SSCCEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh-CCEEEECCcCcCchhcCHHHHHHHH--------HHHHh---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 444566677888 999988777774 69998876644 33322 2688888877643 23 445678
Q ss_pred CCcEEEc
Q 015201 309 GVDVIGL 315 (411)
Q Consensus 309 g~d~l~~ 315 (411)
|+|++.+
T Consensus 88 Gadavlv 94 (283)
T 2pcq_A 88 GAMALLA 94 (283)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 9999843
Done!