Query 015202
Match_columns 411
No_of_seqs 328 out of 3743
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 08:28:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015202.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015202hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ogq_A PGIP-2, polygalacturona 100.0 1.3E-36 4.6E-41 278.7 20.8 247 1-249 57-308 (313)
2 3rgz_A Protein brassinosteroid 100.0 1.2E-35 4E-40 304.5 23.8 257 1-260 425-752 (768)
3 3rgz_A Protein brassinosteroid 100.0 2.5E-32 8.6E-37 279.8 22.9 244 1-244 401-716 (768)
4 1ogq_A PGIP-2, polygalacturona 100.0 5.3E-32 1.8E-36 248.1 14.5 221 3-226 86-308 (313)
5 3v47_A TOLL-like receptor 5B a 100.0 6.2E-31 2.1E-35 254.0 18.6 249 1-249 61-412 (455)
6 4fcg_A Uncharacterized protein 100.0 1.2E-30 4E-35 240.6 17.4 216 2-221 89-313 (328)
7 1ozn_A Reticulon 4 receptor; N 100.0 2.5E-30 8.6E-35 234.0 15.3 239 9-249 25-265 (285)
8 3zyj_A Leucine-rich repeat-con 100.0 1.2E-29 4.2E-34 243.7 20.6 229 18-248 64-295 (440)
9 2id5_A Lingo-1, leucine rich r 100.0 3.9E-30 1.3E-34 249.9 17.2 249 1-249 39-337 (477)
10 3zyi_A Leucine-rich repeat-con 100.0 1.1E-29 3.7E-34 244.9 19.6 229 18-248 75-306 (452)
11 3zyj_A Leucine-rich repeat-con 100.0 3.5E-29 1.2E-33 240.5 21.9 224 1-226 71-296 (440)
12 3zyi_A Leucine-rich repeat-con 100.0 3.3E-29 1.1E-33 241.5 21.4 225 1-227 82-308 (452)
13 3v47_A TOLL-like receptor 5B a 100.0 3.5E-29 1.2E-33 241.7 20.7 244 1-244 37-383 (455)
14 2z66_A Variable lymphocyte rec 100.0 5.6E-29 1.9E-33 227.5 20.0 238 9-249 21-265 (306)
15 2z66_A Variable lymphocyte rec 100.0 5.7E-29 1.9E-33 227.5 18.5 225 1-226 35-265 (306)
16 1xku_A Decorin; proteoglycan, 100.0 1.5E-28 5.1E-33 227.2 20.1 216 2-224 60-278 (330)
17 2id5_A Lingo-1, leucine rich r 100.0 2.2E-29 7.5E-34 244.6 14.5 248 2-249 88-360 (477)
18 2z80_A TOLL-like receptor 2, v 100.0 1.2E-29 4.2E-34 236.6 11.3 239 9-249 45-318 (353)
19 4eco_A Uncharacterized protein 100.0 1E-29 3.4E-34 254.9 11.3 236 3-243 192-468 (636)
20 3t6q_A CD180 antigen; protein- 100.0 7.1E-29 2.4E-33 248.2 17.3 246 1-248 285-563 (606)
21 3j0a_A TOLL-like receptor 5; m 100.0 4.7E-29 1.6E-33 258.1 16.1 245 1-249 273-564 (844)
22 3oja_B Anopheles plasmodium-re 100.0 2.3E-28 7.9E-33 243.6 20.2 240 1-248 82-361 (597)
23 2ft3_A Biglycan; proteoglycan, 100.0 3.9E-28 1.3E-32 224.5 19.7 224 18-245 54-307 (332)
24 3o6n_A APL1; leucine-rich repe 100.0 5E-28 1.7E-32 228.9 20.3 238 2-247 77-354 (390)
25 3vq2_A TLR4, TOLL-like recepto 100.0 3.6E-28 1.2E-32 243.1 19.1 242 2-249 315-562 (606)
26 4fcg_A Uncharacterized protein 100.0 2.2E-28 7.6E-33 225.4 16.2 220 16-240 79-309 (328)
27 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-28 4.9E-33 222.5 14.2 227 1-228 39-267 (285)
28 1ziw_A TOLL-like receptor 3; i 100.0 6.7E-28 2.3E-32 244.3 20.0 249 1-249 336-626 (680)
29 4ecn_A Leucine-rich repeat pro 100.0 9.4E-29 3.2E-33 252.7 13.7 189 34-227 440-662 (876)
30 2z62_A TOLL-like receptor 4, v 100.0 4.7E-28 1.6E-32 218.0 16.5 217 9-228 21-243 (276)
31 4eco_A Uncharacterized protein 100.0 1.9E-28 6.4E-33 245.7 15.1 239 1-244 213-500 (636)
32 4g8a_A TOLL-like receptor 4; l 100.0 3.8E-27 1.3E-31 236.7 24.2 126 1-126 59-186 (635)
33 1xku_A Decorin; proteoglycan, 100.0 2.8E-27 9.5E-32 218.6 20.6 217 1-223 83-307 (330)
34 2z80_A TOLL-like receptor 2, v 100.0 5.2E-29 1.8E-33 232.4 9.0 227 1-227 59-319 (353)
35 3t6q_A CD180 antigen; protein- 100.0 5.7E-27 2E-31 234.4 23.5 243 1-244 261-512 (606)
36 1ziw_A TOLL-like receptor 3; i 99.9 5.3E-27 1.8E-31 237.8 21.2 227 1-227 388-627 (680)
37 3oja_A Leucine-rich immune mol 99.9 8.4E-28 2.9E-32 233.2 14.5 223 15-249 31-254 (487)
38 1wwl_A Monocyte differentiatio 99.9 4.3E-28 1.5E-32 222.1 10.8 232 3-243 52-307 (312)
39 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-27 4.4E-32 219.5 14.0 235 2-248 18-253 (317)
40 2ft3_A Biglycan; proteoglycan, 99.9 4.6E-27 1.6E-31 217.3 17.6 236 1-242 61-330 (332)
41 3o6n_A APL1; leucine-rich repe 99.9 1.9E-27 6.5E-32 224.9 15.3 233 3-243 54-306 (390)
42 1p9a_G Platelet glycoprotein I 99.9 8.7E-27 3E-31 210.8 18.9 206 14-225 6-211 (290)
43 3oja_B Anopheles plasmodium-re 99.9 2E-27 6.8E-32 236.8 15.7 237 2-243 59-312 (597)
44 4ecn_A Leucine-rich repeat pro 99.9 3.9E-27 1.3E-31 240.8 17.1 231 9-244 480-740 (876)
45 2o6q_A Variable lymphocyte rec 99.9 3.4E-26 1.2E-30 205.1 20.3 207 18-227 16-223 (270)
46 2z7x_B TOLL-like receptor 1, v 99.9 7.4E-27 2.5E-31 229.3 17.4 86 158-243 321-410 (520)
47 2z7x_B TOLL-like receptor 1, v 99.9 1.4E-26 4.8E-31 227.3 19.0 158 88-248 322-484 (520)
48 1wwl_A Monocyte differentiatio 99.9 3E-28 1E-32 223.2 6.5 217 1-223 70-310 (312)
49 3j0a_A TOLL-like receptor 5; m 99.9 6.9E-27 2.3E-31 241.9 17.4 125 2-126 32-161 (844)
50 3vq2_A TLR4, TOLL-like recepto 99.9 1.2E-26 4.1E-31 232.0 18.2 222 2-227 336-563 (606)
51 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.9E-26 6.5E-31 228.4 18.1 158 88-248 351-513 (562)
52 3oja_A Leucine-rich immune mol 99.9 2.4E-27 8.3E-32 229.9 10.6 209 1-223 41-251 (487)
53 2z63_A TOLL-like receptor 4, v 99.9 1.8E-26 6.1E-31 229.1 17.1 243 5-249 269-535 (570)
54 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 3.5E-26 1.2E-30 226.5 18.1 85 158-242 350-438 (562)
55 2z62_A TOLL-like receptor 4, v 99.9 4E-26 1.4E-30 205.4 16.7 201 1-202 35-241 (276)
56 2z81_A CD282 antigen, TOLL-lik 99.9 1.7E-26 5.7E-31 228.3 15.3 135 1-135 33-170 (549)
57 1p9a_G Platelet glycoprotein I 99.9 1.4E-25 4.6E-30 203.0 18.4 207 37-248 5-211 (290)
58 2xwt_C Thyrotropin receptor; s 99.9 7.4E-26 2.5E-30 199.1 15.6 204 8-219 24-236 (239)
59 3rfs_A Internalin B, repeat mo 99.9 6.5E-26 2.2E-30 203.4 15.1 204 14-228 37-241 (272)
60 2o6q_A Variable lymphocyte rec 99.9 3.1E-25 1E-29 198.9 18.9 196 2-200 24-220 (270)
61 2z63_A TOLL-like receptor 4, v 99.9 1.3E-25 4.4E-30 222.9 18.1 210 16-228 323-537 (570)
62 3o53_A Protein LRIM1, AGAP0063 99.9 5.7E-26 2E-30 208.5 13.1 209 1-223 41-251 (317)
63 4fmz_A Internalin; leucine ric 99.9 3.9E-25 1.3E-29 205.6 18.5 229 1-242 95-343 (347)
64 3rfs_A Internalin B, repeat mo 99.9 5.7E-25 1.9E-29 197.3 15.2 206 16-227 17-223 (272)
65 4g8a_A TOLL-like receptor 4; l 99.9 2.1E-24 7.3E-29 216.7 20.1 249 1-249 83-584 (635)
66 1h6u_A Internalin H; cell adhe 99.9 1.5E-24 5E-29 198.1 16.1 195 14-223 37-231 (308)
67 2z81_A CD282 antigen, TOLL-lik 99.9 4.1E-25 1.4E-29 218.3 12.7 163 3-168 14-179 (549)
68 4fmz_A Internalin; leucine ric 99.9 2.1E-24 7.3E-29 200.6 16.7 196 14-222 151-346 (347)
69 1o6v_A Internalin A; bacterial 99.9 4.8E-24 1.6E-28 206.3 18.0 206 2-222 76-300 (466)
70 3bz5_A Internalin-J, INLJ; leu 99.9 1.8E-23 6.2E-28 201.0 21.4 201 1-225 49-249 (457)
71 1o6v_A Internalin A; bacterial 99.9 7.5E-24 2.6E-28 204.9 18.6 227 1-243 97-342 (466)
72 4glp_A Monocyte differentiatio 99.9 9.7E-25 3.3E-29 199.7 11.3 221 20-244 66-306 (310)
73 2xwt_C Thyrotropin receptor; s 99.9 5.3E-24 1.8E-28 187.3 13.1 217 17-242 10-236 (239)
74 3m19_A Variable lymphocyte rec 99.9 3E-23 1E-27 183.8 17.3 180 18-200 14-194 (251)
75 3bz5_A Internalin-J, INLJ; leu 99.9 4.4E-23 1.5E-27 198.3 19.4 216 6-244 30-245 (457)
76 3m19_A Variable lymphocyte rec 99.9 4E-23 1.4E-27 183.0 17.1 182 42-226 14-196 (251)
77 4glp_A Monocyte differentiatio 99.9 8.2E-24 2.8E-28 193.5 12.8 202 16-223 89-308 (310)
78 2ca6_A RAN GTPase-activating p 99.9 5.3E-25 1.8E-29 207.8 2.9 236 9-244 23-315 (386)
79 3goz_A Leucine-rich repeat-con 99.9 1.6E-24 5.5E-29 202.6 4.3 243 1-243 5-295 (362)
80 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.3E-27 185.3 14.9 184 1-199 48-231 (308)
81 1jl5_A Outer protein YOPM; leu 99.9 7.1E-23 2.4E-27 196.7 13.9 221 1-243 18-268 (454)
82 2ast_B S-phase kinase-associat 99.9 4.5E-24 1.5E-28 197.5 4.3 208 11-219 61-282 (336)
83 2ca6_A RAN GTPase-activating p 99.9 3E-24 1E-28 202.6 0.9 225 1-225 39-319 (386)
84 3g06_A SSPH2 (leucine-rich rep 99.9 2E-21 6.9E-26 192.4 19.6 108 1-126 47-154 (622)
85 2ast_B S-phase kinase-associat 99.9 2.4E-23 8.3E-28 192.6 4.3 223 1-228 77-312 (336)
86 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4.1E-28 196.6 2.0 224 1-224 29-299 (362)
87 1jl5_A Outer protein YOPM; leu 99.9 7E-21 2.4E-25 182.8 20.4 120 18-150 131-250 (454)
88 3g06_A SSPH2 (leucine-rich rep 99.9 3.9E-21 1.3E-25 190.4 18.6 199 1-225 68-300 (622)
89 2o6s_A Variable lymphocyte rec 99.9 1.3E-21 4.5E-26 168.1 12.8 179 21-209 10-189 (208)
90 4ay9_X Follicle-stimulating ho 99.9 2.4E-21 8.1E-26 180.2 15.4 236 3-246 18-259 (350)
91 1h6t_A Internalin B; cell adhe 99.9 5.8E-22 2E-26 179.3 11.0 193 16-223 22-214 (291)
92 3cvr_A Invasion plasmid antige 99.9 1.3E-21 4.5E-26 191.5 13.6 181 19-226 60-247 (571)
93 2o6s_A Variable lymphocyte rec 99.9 1.5E-21 5.2E-26 167.7 11.7 174 45-228 10-184 (208)
94 3cvr_A Invasion plasmid antige 99.9 3.7E-21 1.3E-25 188.3 14.4 183 1-210 66-255 (571)
95 1h6t_A Internalin B; cell adhe 99.8 3.4E-21 1.2E-25 174.2 12.4 174 14-200 42-215 (291)
96 1m9s_A Internalin B; cell inva 99.8 2.3E-21 7.9E-26 191.7 12.0 193 17-224 20-212 (605)
97 1z7x_W Ribonuclease inhibitor; 99.8 4.6E-23 1.6E-27 199.2 -0.2 222 1-222 120-383 (461)
98 1m9s_A Internalin B; cell inva 99.8 6.3E-21 2.2E-25 188.6 14.0 185 2-201 29-213 (605)
99 2xot_A Amphoterin-induced prot 99.8 8.4E-21 2.9E-25 177.2 13.3 179 21-225 21-205 (361)
100 1z7x_W Ribonuclease inhibitor; 99.8 3.6E-23 1.2E-27 199.9 -3.0 223 1-223 63-327 (461)
101 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-20 7.6E-25 161.7 14.5 154 70-226 15-170 (220)
102 2v9t_B SLIT homolog 2 protein 99.8 3.4E-20 1.2E-24 160.5 15.2 153 70-225 15-168 (220)
103 2v9t_B SLIT homolog 2 protein 99.8 4.3E-20 1.5E-24 159.9 13.8 150 21-173 14-164 (220)
104 4ay9_X Follicle-stimulating ho 99.8 5.8E-20 2E-24 170.8 14.1 215 1-220 37-257 (350)
105 1dce_A Protein (RAB geranylger 99.8 9E-22 3.1E-26 193.5 1.9 180 15-200 346-548 (567)
106 2xot_A Amphoterin-induced prot 99.8 2.1E-20 7.1E-25 174.5 10.3 170 2-174 26-202 (361)
107 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4E-24 157.2 14.1 154 21-200 14-168 (220)
108 3e6j_A Variable lymphocyte rec 99.8 9.5E-20 3.3E-24 158.8 13.3 153 20-176 21-174 (229)
109 1xeu_A Internalin C; cellular 99.8 1.4E-20 4.9E-25 167.5 8.0 177 6-198 9-185 (263)
110 3e6j_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 155.0 15.2 152 44-199 21-173 (229)
111 1dce_A Protein (RAB geranylger 99.8 3.4E-21 1.2E-25 189.4 -0.1 187 1-192 356-567 (567)
112 4ezg_A Putative uncharacterize 99.8 2.3E-19 7.9E-24 152.6 11.2 153 63-222 41-194 (197)
113 4ezg_A Putative uncharacterize 99.8 2.3E-19 7.9E-24 152.6 10.9 152 39-198 41-194 (197)
114 1xeu_A Internalin C; cellular 99.8 5.3E-19 1.8E-23 157.3 12.3 161 2-176 27-187 (263)
115 4b8c_D Glucose-repressible alc 99.8 8.5E-20 2.9E-24 184.9 6.5 182 33-223 215-405 (727)
116 1w8a_A SLIT protein; signaling 99.8 3.3E-19 1.1E-23 150.9 9.1 131 69-202 11-143 (192)
117 1w8a_A SLIT protein; signaling 99.8 4.9E-18 1.7E-22 143.7 12.6 132 93-226 11-143 (192)
118 4b8c_D Glucose-repressible alc 99.8 3E-19 1E-23 180.9 4.8 181 9-198 215-404 (727)
119 3sb4_A Hypothetical leucine ri 99.7 2.1E-17 7E-22 152.2 13.9 82 17-99 48-157 (329)
120 2wfh_A SLIT homolog 2 protein 99.7 2.4E-17 8.1E-22 139.5 12.9 129 94-225 14-142 (193)
121 2ell_A Acidic leucine-rich nuc 99.7 4.2E-18 1.5E-22 140.9 7.4 131 42-174 24-160 (168)
122 2ell_A Acidic leucine-rich nuc 99.7 2.5E-17 8.4E-22 136.3 8.9 131 18-150 24-160 (168)
123 2je0_A Acidic leucine-rich nuc 99.7 8.3E-18 2.8E-22 136.2 5.7 125 18-144 17-147 (149)
124 2o6r_A Variable lymphocyte rec 99.7 1.2E-16 4.1E-21 133.3 12.6 132 93-226 10-141 (177)
125 2wfh_A SLIT homolog 2 protein 99.7 2E-16 6.8E-21 133.7 13.2 128 69-199 13-140 (193)
126 3sb4_A Hypothetical leucine ri 99.7 1.4E-16 4.6E-21 146.7 11.1 207 16-226 23-314 (329)
127 2je0_A Acidic leucine-rich nuc 99.7 5.9E-17 2E-21 131.1 6.8 83 66-149 17-100 (149)
128 1a9n_A U2A', U2A'; complex (nu 99.7 7.6E-17 2.6E-21 134.3 6.8 109 14-126 15-126 (176)
129 1ds9_A Outer arm dynein; leuci 99.7 1.5E-18 5.2E-23 147.7 -4.1 135 14-152 14-155 (198)
130 1ds9_A Outer arm dynein; leuci 99.6 1.9E-18 6.6E-23 147.0 -5.5 134 38-175 14-154 (198)
131 2o6r_A Variable lymphocyte rec 99.6 3.2E-15 1.1E-19 124.6 13.2 132 68-202 9-141 (177)
132 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.8E-20 127.3 9.5 132 87-222 16-153 (176)
133 3ogk_B Coronatine-insensitive 99.6 6.7E-17 2.3E-21 160.9 2.4 178 14-193 160-350 (592)
134 3ogk_B Coronatine-insensitive 99.6 4.1E-17 1.4E-21 162.5 0.7 201 16-217 110-350 (592)
135 4fdw_A Leucine rich hypothetic 99.6 2.1E-14 7E-19 135.2 17.8 226 6-242 124-355 (401)
136 4fdw_A Leucine rich hypothetic 99.6 3E-14 1E-18 134.0 16.5 209 6-223 146-359 (401)
137 3g39_A Variable lymphocyte rec 99.5 3.5E-14 1.2E-18 117.3 11.0 108 91-200 10-117 (170)
138 3g39_A Variable lymphocyte rec 99.5 4.3E-14 1.5E-18 116.8 11.5 109 115-226 11-119 (170)
139 2r9u_A Variable lymphocyte rec 99.5 9.9E-14 3.4E-18 115.0 11.5 105 93-199 15-119 (174)
140 2p1m_B Transport inhibitor res 99.5 1.3E-15 4.6E-20 151.5 -0.4 110 14-123 101-221 (594)
141 2r9u_A Variable lymphocyte rec 99.5 1E-13 3.5E-18 114.9 10.9 109 115-226 14-122 (174)
142 2p1m_B Transport inhibitor res 99.5 2.6E-15 8.8E-20 149.5 0.4 156 13-169 61-243 (594)
143 3un9_A NLR family member X1; l 99.4 8.8E-15 3E-19 136.4 -2.8 169 40-208 70-262 (372)
144 4aoj_A High affinity nerve gro 99.4 2.2E-13 7.4E-18 124.5 5.4 83 328-410 45-177 (329)
145 3un9_A NLR family member X1; l 99.4 1.2E-14 4.1E-19 135.5 -3.4 159 65-223 71-253 (372)
146 4gt4_A Tyrosine-protein kinase 99.4 7.1E-14 2.4E-18 126.4 1.8 81 330-410 32-164 (308)
147 2ifg_A High affinity nerve gro 99.4 1E-12 3.5E-17 121.6 9.4 102 95-198 13-116 (347)
148 4asz_A BDNF/NT-3 growth factor 99.4 2.5E-13 8.6E-18 122.3 4.4 82 329-410 18-147 (299)
149 2ifg_A High affinity nerve gro 99.4 1.4E-12 4.8E-17 120.7 9.6 103 22-126 12-116 (347)
150 3omv_A RAF proto-oncogene seri 99.2 6.4E-12 2.2E-16 113.2 6.1 83 326-410 38-151 (307)
151 3hmm_A TGF-beta receptor type- 99.2 2.3E-11 7.9E-16 110.0 6.0 78 329-410 8-119 (303)
152 2nru_A Interleukin-1 receptor- 99.1 9.5E-11 3.3E-15 106.3 8.4 100 310-410 11-152 (307)
153 4ase_A Vascular endothelial gr 99.1 2.3E-11 8E-16 111.9 3.7 94 317-410 57-204 (353)
154 2qkw_B Protein kinase; three-h 99.1 3.9E-11 1.3E-15 109.7 4.1 98 313-410 28-158 (321)
155 4fs7_A Uncharacterized protein 99.1 2.9E-09 9.8E-14 100.2 16.6 198 12-218 156-375 (394)
156 3fpq_A Serine/threonine-protei 99.1 1.7E-10 5.9E-15 103.1 6.9 81 330-410 32-148 (290)
157 3uim_A Brassinosteroid insensi 99.1 7.5E-11 2.6E-15 108.0 4.7 101 310-410 16-150 (326)
158 2c30_A Serine/threonine-protei 99.0 3E-10 1E-14 103.8 7.9 100 311-410 22-160 (321)
159 4fih_A Serine/threonine-protei 99.0 1.2E-10 4E-15 106.4 5.1 85 326-410 76-189 (346)
160 2ra8_A Uncharacterized protein 99.0 3E-11 1E-15 111.6 0.1 180 36-220 133-341 (362)
161 4gt6_A Cell surface protein; l 99.0 1.5E-08 5.1E-13 95.3 18.2 38 13-51 58-96 (394)
162 2ra8_A Uncharacterized protein 99.0 1.8E-10 6.2E-15 106.4 4.5 180 42-223 107-321 (362)
163 4g31_A Eukaryotic translation 99.0 2E-10 6.8E-15 103.4 4.3 86 325-410 6-137 (299)
164 4fie_A Serine/threonine-protei 99.0 2.8E-10 9.6E-15 106.6 5.4 86 325-410 152-266 (423)
165 4b9d_A Serine/threonine-protei 99.0 6.4E-10 2.2E-14 101.7 6.5 86 325-410 25-144 (350)
166 4fs7_A Uncharacterized protein 98.9 2.5E-08 8.4E-13 93.8 13.9 195 11-214 178-393 (394)
167 4gt6_A Cell surface protein; l 98.8 2.4E-07 8.2E-12 87.0 19.5 204 11-221 107-369 (394)
168 3hyh_A Carbon catabolite-derep 98.8 2.4E-09 8.2E-14 94.8 5.0 86 324-410 13-131 (275)
169 3s95_A LIMK-1, LIM domain kina 98.8 5.3E-09 1.8E-13 94.9 6.7 86 325-410 11-127 (310)
170 4b99_A Mitogen-activated prote 98.8 4E-09 1.4E-13 98.7 5.8 86 325-410 55-177 (398)
171 4g3f_A NF-kappa-beta-inducing 98.8 2.3E-09 7.7E-14 97.6 3.8 81 325-410 59-169 (336)
172 1io0_A Tropomodulin; LRR prote 98.8 1.5E-09 5E-14 90.6 2.3 115 36-150 30-164 (185)
173 2qol_A Ephrin receptor; recept 98.8 5.3E-09 1.8E-13 97.5 5.9 87 324-410 45-166 (373)
174 3kul_A Ephrin type-A receptor 98.8 1.1E-08 3.8E-13 93.5 7.7 98 313-410 29-170 (325)
175 4aw0_A HPDK1, 3-phosphoinositi 98.7 3.2E-09 1.1E-13 95.5 3.2 86 325-410 33-151 (311)
176 4h09_A Hypothetical leucine ri 98.7 3.2E-07 1.1E-11 85.6 17.0 106 111-219 215-320 (379)
177 3p86_A Serine/threonine-protei 98.7 3.8E-09 1.3E-13 95.9 3.6 86 324-410 37-156 (309)
178 3ugc_A Tyrosine-protein kinase 98.7 1.1E-08 3.9E-13 92.0 5.7 84 327-410 13-133 (295)
179 3kmu_A ILK, integrin-linked ki 98.7 8.9E-09 3E-13 91.3 4.8 84 326-410 12-130 (271)
180 3p1a_A MYT1 kinase, membrane-a 98.7 2.5E-09 8.7E-14 97.1 1.0 87 324-410 57-176 (311)
181 2clq_A Mitogen-activated prote 98.7 2.6E-08 8.8E-13 89.5 7.5 85 326-410 24-141 (295)
182 1qcf_A Haematopoetic cell kina 98.7 4.2E-09 1.4E-13 101.0 2.4 86 324-410 188-303 (454)
183 3pg1_A Mitogen-activated prote 98.7 2E-08 6.7E-13 93.2 6.6 98 313-410 11-153 (362)
184 1io0_A Tropomodulin; LRR prote 98.7 3E-09 1E-13 88.7 0.6 114 13-126 31-164 (185)
185 1fmk_A C-SRC, P60-SRC, tyrosin 98.7 7.2E-09 2.5E-13 99.3 3.1 85 325-410 185-299 (452)
186 3ubd_A Ribosomal protein S6 ki 98.7 2.7E-09 9.1E-14 95.9 0.0 86 325-410 25-145 (304)
187 3fxz_A Serine/threonine-protei 98.7 2.9E-08 9.9E-13 89.5 6.8 87 324-410 20-135 (297)
188 2h8h_A Proto-oncogene tyrosine 98.7 8.2E-09 2.8E-13 101.0 3.4 86 324-410 267-382 (535)
189 3uto_A Twitchin; kinase, muscl 98.6 2.4E-08 8.3E-13 98.1 6.5 86 325-410 158-274 (573)
190 4hcu_A Tyrosine-protein kinase 98.6 3.1E-08 1.1E-12 87.8 6.5 84 326-410 12-125 (269)
191 4euu_A Serine/threonine-protei 98.6 1.7E-08 5.8E-13 92.0 4.7 85 326-410 11-131 (319)
192 3vhe_A Vascular endothelial gr 98.6 9.4E-09 3.2E-13 95.2 3.1 64 313-376 11-81 (359)
193 3rw6_A Nuclear RNA export fact 98.6 1.4E-08 4.7E-13 89.1 3.9 104 14-119 137-257 (267)
194 3rw6_A Nuclear RNA export fact 98.6 1E-08 3.4E-13 90.0 2.9 105 38-143 137-257 (267)
195 3cbl_A C-FES, proto-oncogene t 98.6 1E-08 3.4E-13 95.8 3.0 86 325-410 115-232 (377)
196 1opk_A P150, C-ABL, proto-onco 98.6 1.3E-08 4.4E-13 98.7 3.8 85 325-410 221-337 (495)
197 3e7e_A HBUB1, BUB1A, mitotic c 98.6 1.2E-08 4.1E-13 94.9 3.4 85 323-410 64-191 (365)
198 2x4f_A Myosin light chain kina 98.6 2.2E-08 7.5E-13 93.3 5.1 82 329-410 94-206 (373)
199 3soc_A Activin receptor type-2 98.6 2.5E-08 8.4E-13 91.0 5.3 84 325-410 25-140 (322)
200 1k9a_A Carboxyl-terminal SRC k 98.6 3E-08 1E-12 94.9 6.1 83 325-410 194-308 (450)
201 2eva_A TAK1 kinase - TAB1 chim 98.6 2.2E-08 7.6E-13 90.7 4.9 81 326-409 10-120 (307)
202 4eut_A Serine/threonine-protei 98.6 3E-08 1E-12 93.2 5.7 85 326-410 11-131 (396)
203 3niz_A Rhodanese family protei 98.6 3.4E-08 1.2E-12 89.6 5.7 86 325-410 22-138 (311)
204 4f0f_A Serine/threonine-protei 98.6 4.9E-08 1.7E-12 87.3 6.6 87 324-410 19-141 (287)
205 2zv2_A Calcium/calmodulin-depe 98.6 5E-08 1.7E-12 87.9 6.6 87 324-410 13-156 (298)
206 4aw2_A Serine/threonine-protei 98.6 2.3E-08 7.7E-13 95.1 4.4 96 315-410 65-194 (437)
207 3dbq_A Dual specificity protei 98.6 2.3E-08 7.8E-13 92.1 4.3 82 326-410 11-127 (343)
208 3ll6_A Cyclin G-associated kin 98.6 2.5E-08 8.4E-13 91.4 4.5 86 325-410 29-155 (337)
209 4f9c_A Cell division cycle 7-r 98.6 3.3E-08 1.1E-12 91.4 5.2 88 321-410 18-136 (361)
210 3q4u_A Activin receptor type-1 98.6 7.9E-08 2.7E-12 86.6 7.6 81 324-408 8-122 (301)
211 3gen_A Tyrosine-protein kinase 98.6 3.6E-08 1.2E-12 88.1 5.0 85 325-410 25-139 (283)
212 1kob_A Twitchin; kinase, intra 98.6 6.7E-08 2.3E-12 90.4 7.0 87 324-410 51-168 (387)
213 2zmd_A Dual specificity protei 98.6 3.5E-08 1.2E-12 92.5 5.0 82 326-410 58-174 (390)
214 3sxs_A Cytoplasmic tyrosine-pr 98.6 3.7E-08 1.3E-12 87.2 4.9 85 325-410 9-123 (268)
215 2vd5_A DMPK protein; serine/th 98.6 2.8E-08 9.6E-13 93.7 4.1 97 314-410 51-181 (412)
216 2psq_A Fibroblast growth facto 98.6 2.9E-08 1E-12 92.4 4.1 86 325-410 82-222 (370)
217 1qpc_A LCK kinase; alpha beta 98.6 2.6E-08 8.7E-13 88.8 3.5 85 325-410 14-128 (279)
218 1ob3_A PFPK5, cell division co 98.6 4.1E-08 1.4E-12 88.0 4.9 85 326-410 4-119 (288)
219 3dtc_A Mitogen-activated prote 98.6 4.7E-08 1.6E-12 86.6 5.2 85 325-410 8-124 (271)
220 3t9t_A Tyrosine-protein kinase 98.6 6.9E-08 2.4E-12 85.3 6.2 84 326-410 10-123 (267)
221 2ac3_A MAP kinase-interacting 98.6 7.6E-08 2.6E-12 87.4 6.7 81 330-410 19-130 (316)
222 2ozo_A Tyrosine-protein kinase 98.6 5.6E-08 1.9E-12 96.6 6.2 78 331-410 343-455 (613)
223 2buj_A Serine/threonine-protei 98.6 2.5E-08 8.7E-13 90.6 3.3 86 325-410 30-153 (317)
224 2w1i_A JAK2; chromosomal rearr 98.6 7E-08 2.4E-12 88.1 6.3 84 327-410 44-164 (326)
225 3l9p_A Anaplastic lymphoma kin 98.6 6.2E-08 2.1E-12 90.1 6.0 86 325-410 72-200 (367)
226 3o0g_A Cell division protein k 98.5 6.3E-08 2.2E-12 86.9 5.8 86 325-410 3-120 (292)
227 1luf_A Muscle-specific tyrosin 98.5 3.8E-08 1.3E-12 90.5 4.4 90 321-410 44-193 (343)
228 3fe3_A MAP/microtubule affinit 98.5 7.4E-08 2.5E-12 88.1 6.2 87 324-410 15-133 (328)
229 3tki_A Serine/threonine-protei 98.5 8.3E-08 2.9E-12 87.5 6.5 86 325-410 8-124 (323)
230 3f3z_A Calcium/calmodulin-depe 98.5 4.6E-08 1.6E-12 87.0 4.6 86 325-410 10-125 (277)
231 4fvq_A Tyrosine-protein kinase 98.5 5.6E-08 1.9E-12 87.1 5.0 85 326-410 10-132 (289)
232 3poz_A Epidermal growth factor 98.5 5.4E-08 1.9E-12 88.9 4.9 86 325-410 16-136 (327)
233 3i6u_A CDS1, serine/threonine- 98.5 1.2E-07 4.2E-12 89.7 7.4 89 322-410 133-258 (419)
234 1u59_A Tyrosine-protein kinase 98.5 1.3E-07 4.6E-12 84.5 7.3 79 330-410 16-129 (287)
235 1u5q_A Serine/threonine protei 98.5 4.9E-08 1.7E-12 90.1 4.5 85 326-410 56-173 (348)
236 3lxl_A Tyrosine-protein kinase 98.5 4.6E-08 1.6E-12 89.4 4.2 85 326-410 25-146 (327)
237 1mqb_A Ephrin type-A receptor 98.5 1.1E-07 3.8E-12 87.1 6.5 82 329-410 49-166 (333)
238 2w4o_A Calcium/calmodulin-depe 98.5 8.3E-08 2.8E-12 88.6 5.7 86 323-410 52-167 (349)
239 3zgw_A Maternal embryonic leuc 98.5 7.2E-08 2.5E-12 88.8 5.1 87 324-410 10-127 (347)
240 3lxp_A Non-receptor tyrosine-p 98.5 1.4E-07 4.9E-12 85.8 7.0 83 328-410 35-153 (318)
241 2j7t_A Serine/threonine-protei 98.5 8.7E-08 3E-12 86.4 5.5 86 325-410 20-136 (302)
242 4fl3_A Tyrosine-protein kinase 98.5 9.6E-08 3.3E-12 95.2 6.1 81 330-410 375-488 (635)
243 2pvf_A Fibroblast growth facto 98.5 7.7E-08 2.6E-12 88.2 5.0 87 324-410 35-176 (334)
244 3lm5_A Serine/threonine-protei 98.5 2.2E-07 7.4E-12 84.9 8.0 81 330-410 35-150 (327)
245 3cek_A Dual specificity protei 98.5 6.5E-08 2.2E-12 87.8 4.4 88 323-410 27-146 (313)
246 1p4o_A Insulin-like growth fac 98.5 2.1E-08 7.3E-13 91.3 1.2 94 317-410 18-157 (322)
247 2izr_A Casein kinase I isoform 98.5 1.2E-07 4E-12 86.8 6.0 84 324-410 9-124 (330)
248 2i6l_A Mitogen-activated prote 98.5 9.7E-08 3.3E-12 86.7 5.5 86 325-410 12-139 (320)
249 2pml_X PFPK7, Ser/Thr protein 98.5 8.9E-08 3E-12 88.2 5.3 85 324-409 31-169 (348)
250 3og7_A AKAP9-BRAF fusion prote 98.5 9.2E-08 3.1E-12 85.7 5.2 82 325-410 25-139 (289)
251 4agu_A Cyclin-dependent kinase 98.5 1.1E-07 3.9E-12 86.0 5.9 86 325-410 4-121 (311)
252 3kn6_A Ribosomal protein S6 ki 98.5 2.1E-07 7.1E-12 85.0 7.6 79 329-410 16-125 (325)
253 3sv0_A Casein kinase I-like; t 98.5 1.8E-07 6.1E-12 90.0 7.5 84 324-410 7-122 (483)
254 2y0a_A Death-associated protei 98.5 1.7E-07 6E-12 85.5 7.1 85 326-410 13-133 (326)
255 2yab_A Death-associated protei 98.5 1.4E-07 4.8E-12 87.4 6.5 86 325-410 13-134 (361)
256 3a7i_A MST3 kinase, serine/thr 98.5 1.6E-07 5.5E-12 84.7 6.6 86 325-410 23-138 (303)
257 3kk8_A Calcium/calmodulin depe 98.5 1.2E-07 4.1E-12 84.6 5.7 87 324-410 6-124 (284)
258 2bdw_A Hypothetical protein K1 98.5 1.3E-07 4.4E-12 87.7 6.0 87 324-410 29-147 (362)
259 1rjb_A FL cytokine receptor; k 98.5 8E-08 2.8E-12 88.4 4.6 88 323-410 44-191 (344)
260 3uzp_A CKI-delta, CKID, casein 98.5 1.7E-07 5.6E-12 84.2 6.5 84 324-410 9-124 (296)
261 3dzo_A Rhoptry kinase domain; 98.5 4.1E-08 1.4E-12 92.8 2.6 53 324-376 78-134 (413)
262 1csn_A Casein kinase-1; phosph 98.5 2.3E-07 7.7E-12 83.4 7.3 83 325-410 11-125 (298)
263 4h09_A Hypothetical leucine ri 98.5 3.2E-06 1.1E-10 78.7 15.4 200 13-219 131-343 (379)
264 3tt0_A Basic fibroblast growth 98.5 1.5E-07 5.2E-12 87.9 6.4 86 325-410 70-210 (382)
265 3pls_A Macrophage-stimulating 98.5 1.5E-07 5.2E-12 84.5 6.1 82 329-410 26-143 (298)
266 1o6l_A RAC-beta serine/threoni 98.5 9.1E-08 3.1E-12 87.8 4.6 87 324-410 5-124 (337)
267 2xir_A Vascular endothelial gr 98.5 6.7E-08 2.3E-12 87.7 3.7 97 314-410 17-167 (316)
268 3g33_A Cell division protein k 98.5 1.5E-07 5.1E-12 85.1 6.0 88 323-410 8-139 (308)
269 3txo_A PKC-L, NPKC-ETA, protei 98.5 1.1E-07 3.9E-12 87.7 5.1 88 323-410 22-143 (353)
270 3qd2_B Eukaryotic translation 98.5 8.5E-08 2.9E-12 87.6 4.2 52 325-376 7-60 (332)
271 1xjd_A Protein kinase C, theta 98.5 1.2E-07 4E-12 87.3 5.1 90 321-410 14-137 (345)
272 3llt_A Serine/threonine kinase 98.5 4.9E-08 1.7E-12 90.4 2.5 98 311-410 22-156 (360)
273 3kfa_A Tyrosine-protein kinase 98.5 3.1E-08 1.1E-12 88.7 1.1 86 323-409 12-129 (288)
274 1t46_A HOMO sapiens V-KIT hard 98.5 9.7E-08 3.3E-12 86.5 4.4 87 324-410 23-164 (313)
275 1x8b_A WEE1HU, WEE1-like prote 98.4 5.4E-08 1.9E-12 86.9 2.7 87 324-410 11-134 (289)
276 3v8s_A RHO-associated protein 98.4 4.8E-08 1.6E-12 92.0 2.4 95 316-410 61-187 (410)
277 3is5_A Calcium-dependent prote 98.4 1.5E-07 5.1E-12 84.2 5.5 85 326-410 24-143 (285)
278 4hgt_A Casein kinase I isoform 98.4 2.3E-07 7.7E-12 83.3 6.7 85 323-410 8-124 (296)
279 2eue_A Carbon catabolite derep 98.4 1.9E-07 6.5E-12 83.0 6.0 87 324-410 13-131 (275)
280 2a2a_A Death-associated protei 98.4 1.7E-07 5.7E-12 85.4 5.7 85 326-410 14-134 (321)
281 4eqm_A Protein kinase; transfe 98.4 1.6E-07 5.4E-12 84.5 5.3 85 326-410 13-130 (294)
282 1tki_A Titin; serine kinase, m 98.4 2.8E-07 9.7E-12 83.9 7.1 85 325-410 6-121 (321)
283 3cok_A Serine/threonine-protei 98.4 1.4E-07 4.9E-12 83.9 5.0 87 324-410 11-131 (278)
284 3kvw_A DYRK2, dual specificity 98.4 1.4E-07 4.8E-12 89.6 5.2 83 326-409 99-218 (429)
285 2w5a_A Serine/threonine-protei 98.4 9.9E-08 3.4E-12 84.9 3.9 85 325-409 7-129 (279)
286 4e5w_A Tyrosine-protein kinase 98.4 1.4E-07 4.9E-12 84.9 5.0 85 326-410 23-145 (302)
287 1t4h_A Serine/threonine-protei 98.4 2.8E-07 9.5E-12 82.6 6.7 81 330-410 32-148 (290)
288 2jam_A Calcium/calmodulin-depe 98.4 1.4E-07 4.7E-12 85.2 4.7 86 325-410 10-125 (304)
289 2pmi_A Negative RE, cyclin-dep 98.4 9.6E-08 3.3E-12 86.9 3.7 87 324-410 5-127 (317)
290 3qup_A Tyrosine-protein kinase 98.4 6.5E-08 2.2E-12 88.2 2.5 89 322-410 21-156 (323)
291 3bhy_A Death-associated protei 98.4 1.6E-07 5.5E-12 83.7 5.1 85 326-410 7-127 (283)
292 3g2f_A Bone morphogenetic prot 98.4 2E-07 6.9E-12 85.4 5.8 82 325-410 14-130 (336)
293 2fst_X Mitogen-activated prote 98.4 1.8E-07 6.1E-12 86.9 5.5 87 324-410 29-151 (367)
294 2yex_A Serine/threonine-protei 98.4 2.5E-07 8.5E-12 82.1 6.2 86 325-410 8-124 (276)
295 3cc6_A Protein tyrosine kinase 98.4 2.3E-07 7.7E-12 82.7 5.9 87 324-410 12-132 (281)
296 2ivs_A Proto-oncogene tyrosine 98.4 7.8E-08 2.7E-12 87.2 2.8 86 325-410 24-169 (314)
297 2wtk_C Serine/threonine-protei 98.4 2.5E-07 8.5E-12 83.5 6.1 87 324-410 5-128 (305)
298 2y7j_A Phosphorylase B kinase 98.4 2.6E-07 8.8E-12 85.8 6.4 90 321-410 91-219 (365)
299 3c1x_A Hepatocyte growth facto 98.4 1.8E-07 6.1E-12 87.1 5.1 82 329-410 94-211 (373)
300 2wqm_A Serine/threonine-protei 98.4 1.1E-07 3.9E-12 86.0 3.8 86 325-410 33-155 (310)
301 2b9h_A MAP kinase FUS3, mitoge 98.4 1.6E-07 5.5E-12 86.7 4.8 87 324-410 11-131 (353)
302 3lb7_A RAF proto-oncogene seri 98.4 1.9E-07 6.5E-12 84.5 5.2 85 324-410 36-151 (307)
303 1fot_A TPK1 delta, CAMP-depend 98.4 2.7E-07 9.1E-12 84.0 6.2 87 324-410 6-125 (318)
304 1mp8_A Focal adhesion kinase 1 98.4 2E-07 6.9E-12 83.1 5.2 86 325-410 16-135 (281)
305 3f66_A Hepatocyte growth facto 98.4 4E-07 1.4E-11 81.9 7.2 82 329-410 30-147 (298)
306 3a8x_A Protein kinase C IOTA t 98.4 2E-07 7E-12 85.7 5.4 86 325-410 10-129 (345)
307 1ua2_A CAK, cell division prot 98.4 1.5E-07 5.2E-12 86.7 4.5 89 322-410 8-131 (346)
308 3gni_B Strad alpha; kinase fol 98.4 1.8E-07 6.1E-12 87.7 5.0 85 326-410 27-147 (389)
309 3rp9_A Mitogen-activated prote 98.4 1.9E-07 6.7E-12 89.5 5.4 87 324-410 53-175 (458)
310 4fr4_A YANK1, serine/threonine 98.4 1.9E-07 6.4E-12 87.2 5.1 86 325-410 16-134 (384)
311 2acx_A G protein-coupled recep 98.4 2.3E-07 7.7E-12 90.7 5.8 87 324-410 184-305 (576)
312 2rku_A Serine/threonine-protei 98.4 2.1E-07 7E-12 83.6 5.1 85 326-410 17-134 (294)
313 3brb_A Proto-oncogene tyrosine 98.4 2.7E-07 9.3E-12 83.6 5.9 87 324-410 34-166 (313)
314 4aaa_A Cyclin-dependent kinase 98.4 2E-07 7E-12 85.2 5.1 85 326-410 27-143 (331)
315 3n9x_A Phosphotransferase; mal 98.4 2.2E-07 7.6E-12 88.3 5.5 87 324-410 26-148 (432)
316 4dc2_A Protein kinase C IOTA t 98.4 1.7E-07 5.9E-12 87.7 4.6 87 324-410 52-172 (396)
317 2yfx_A Tyrosine-protein kinase 98.4 3.3E-07 1.1E-11 83.6 6.4 87 324-410 30-159 (327)
318 3an0_A Dual specificity mitoge 98.4 1.3E-07 4.6E-12 86.8 3.8 86 324-409 51-171 (340)
319 2r3i_A Cell division protein k 98.4 1.6E-07 5.6E-12 84.4 4.3 86 325-410 4-122 (299)
320 3uqc_A Probable conserved tran 98.4 1.8E-07 6.1E-12 83.7 4.4 85 325-410 32-148 (286)
321 3qyz_A Mitogen-activated prote 98.4 2E-07 7E-12 86.4 4.9 87 324-410 27-147 (364)
322 3c0i_A Peripheral plasma membr 98.4 5.1E-07 1.8E-11 83.3 7.4 85 326-410 26-149 (351)
323 3op5_A Serine/threonine-protei 98.4 1.5E-07 5E-12 87.4 3.7 83 323-410 34-171 (364)
324 2owb_A Serine/threonine-protei 98.4 2.4E-07 8.2E-12 84.9 5.1 86 325-410 42-160 (335)
325 1phk_A Phosphorylase kinase; g 98.4 3.1E-07 1.1E-11 82.5 5.8 87 324-410 17-143 (298)
326 2eu9_A Dual specificity protei 98.4 3.1E-07 1E-11 84.7 5.8 86 324-410 19-142 (355)
327 3lzb_A Epidermal growth factor 98.4 2.9E-07 1E-11 84.1 5.5 87 324-410 15-136 (327)
328 3gxj_A TGF-beta receptor type- 98.4 1.4E-07 4.8E-12 85.0 3.3 81 324-408 3-117 (303)
329 1vzo_A Ribosomal protein S6 ki 98.4 1.1E-07 3.8E-12 87.9 2.7 87 324-410 54-178 (355)
330 3fdn_A Serine/threonine-protei 98.4 1.6E-07 5.6E-12 83.6 3.7 87 324-410 9-128 (279)
331 3uc3_A Serine/threonine-protei 98.4 2.8E-07 9.6E-12 85.4 5.3 85 325-410 21-135 (361)
332 3nsz_A CK II alpha, casein kin 98.4 3.5E-07 1.2E-11 83.5 5.8 82 326-410 38-149 (330)
333 3c4z_A Rhodopsin kinase; Ser/T 98.4 2.6E-07 8.8E-12 90.0 5.2 87 324-410 185-308 (543)
334 3a62_A Ribosomal protein S6 ki 98.4 1.7E-07 5.9E-12 85.6 3.7 87 324-410 17-140 (327)
335 2i0e_A Protein kinase C-beta I 98.4 1.7E-07 5.8E-12 86.5 3.6 88 323-410 19-140 (353)
336 2x7f_A TRAF2 and NCK-interacti 98.4 5.9E-08 2E-12 88.5 0.5 97 313-410 13-148 (326)
337 1wak_A Serine/threonine-protei 98.4 2.8E-07 9.7E-12 86.4 5.2 86 324-410 37-165 (397)
338 1blx_A Cyclin-dependent kinase 98.4 2.3E-07 7.9E-12 84.5 4.4 89 322-410 9-139 (326)
339 3gbz_A Kinase, CMGC CDK; ssgci 98.4 1.3E-07 4.6E-12 86.4 2.8 88 323-410 33-151 (329)
340 1xbb_A Tyrosine-protein kinase 98.4 3.6E-07 1.2E-11 81.9 5.6 80 331-410 24-136 (291)
341 3rgf_A Cyclin-dependent kinase 98.4 3.5E-07 1.2E-11 86.2 5.7 80 329-410 26-147 (405)
342 1rdq_E PKA C-alpha, CAMP-depen 98.4 2.3E-07 7.9E-12 85.6 4.3 86 325-410 42-160 (350)
343 2wei_A Calmodulin-domain prote 98.3 2.4E-07 8.3E-12 82.8 4.3 87 324-410 22-140 (287)
344 1z57_A Dual specificity protei 98.3 3E-07 1E-11 84.1 5.1 84 325-410 15-137 (339)
345 2y94_A 5'-AMP-activated protei 98.3 5.1E-07 1.7E-11 86.7 6.8 85 326-410 18-135 (476)
346 2vx3_A Dual specificity tyrosi 98.3 4.3E-07 1.5E-11 84.9 6.1 86 323-409 53-175 (382)
347 3ttj_A Mitogen-activated prote 98.3 3E-07 1E-11 88.2 5.1 87 324-410 62-183 (464)
348 3mi9_A Cell division protein k 98.3 2.7E-07 9.1E-12 85.2 4.6 86 325-410 18-143 (351)
349 3coi_A Mitogen-activated prote 98.3 4.8E-07 1.6E-11 83.5 6.3 86 324-410 24-145 (353)
350 2h6d_A 5'-AMP-activated protei 98.3 3.3E-07 1.1E-11 81.3 5.1 85 325-409 12-129 (276)
351 1j1b_A Glycogen synthase kinas 98.3 1.3E-07 4.4E-12 89.6 2.2 81 326-410 56-175 (420)
352 4exu_A Mitogen-activated prote 98.3 3.8E-07 1.3E-11 84.9 5.3 87 324-410 42-163 (371)
353 2h34_A Serine/threonine-protei 98.3 2.8E-07 9.6E-12 83.4 4.3 87 324-410 34-153 (309)
354 2a19_B Interferon-induced, dou 98.3 1.6E-07 5.5E-12 83.7 2.5 83 324-410 11-141 (284)
355 3fme_A Dual specificity mitoge 98.3 2E-07 6.8E-12 83.4 3.1 86 324-409 7-127 (290)
356 2qr7_A Ribosomal protein S6 ki 98.3 3.1E-07 1.1E-11 84.4 4.4 83 324-410 22-135 (342)
357 2jii_A Serine/threonine-protei 98.3 1.7E-07 6E-12 86.5 2.7 80 325-410 43-178 (352)
358 3ork_A Serine/threonine protei 98.3 1.4E-07 4.9E-12 85.4 2.0 86 325-410 13-135 (311)
359 3eqc_A Dual specificity mitoge 98.3 3.3E-07 1.1E-11 84.8 4.5 85 325-409 34-149 (360)
360 4ejn_A RAC-alpha serine/threon 98.3 1.1E-07 3.8E-12 90.8 1.4 86 324-409 148-266 (446)
361 3dls_A PAS domain-containing s 98.3 1.9E-07 6.6E-12 85.6 2.8 87 324-410 24-149 (335)
362 3nyv_A Calmodulin-domain prote 98.3 4.5E-07 1.5E-11 87.6 5.6 85 326-410 28-145 (484)
363 1nxk_A MAP kinase-activated pr 98.3 5.4E-07 1.9E-11 84.7 5.9 76 330-410 68-180 (400)
364 3soa_A Calcium/calmodulin-depe 98.3 3.9E-07 1.3E-11 86.8 4.9 87 324-410 11-129 (444)
365 3kex_A Receptor tyrosine-prote 98.3 1.8E-07 6E-12 85.4 2.4 85 326-410 15-134 (325)
366 3q5i_A Protein kinase; CDPK, m 98.3 4.9E-07 1.7E-11 87.8 5.7 87 324-410 36-165 (504)
367 1b6c_B TGF-B superfamily recep 98.3 5.7E-07 2E-11 82.5 5.9 83 322-408 40-156 (342)
368 3mdy_A Bone morphogenetic prot 98.3 4.4E-07 1.5E-11 83.1 5.0 84 323-410 36-153 (337)
369 2ycf_A Serine/threonine-protei 98.3 4.5E-07 1.5E-11 82.6 5.1 86 325-410 11-133 (322)
370 1zy4_A Serine/threonine-protei 98.3 4.7E-07 1.6E-11 81.4 5.0 86 324-410 6-135 (303)
371 3v5w_A G-protein coupled recep 98.3 4.7E-07 1.6E-11 89.2 5.3 87 324-410 189-311 (689)
372 1byg_A CSK, protein (C-termina 98.3 8.5E-08 2.9E-12 85.4 0.0 83 325-410 22-136 (278)
373 2vuw_A Serine/threonine-protei 98.3 5.3E-07 1.8E-11 82.6 5.4 49 326-375 22-78 (336)
374 3pfq_A PKC-B, PKC-beta, protei 98.3 3.4E-07 1.2E-11 91.9 4.4 88 323-410 340-461 (674)
375 1cm8_A Phosphorylated MAP kina 98.3 3.4E-07 1.2E-11 85.0 4.0 87 324-410 25-147 (367)
376 3com_A Serine/threonine-protei 98.3 5E-07 1.7E-11 81.8 4.9 86 323-410 28-144 (314)
377 3mtl_A Cell division protein k 98.3 1.2E-07 4.2E-12 86.4 0.9 86 325-410 3-119 (324)
378 3e4g_A ATP synthase subunit S, 98.3 3.9E-07 1.3E-11 74.1 3.5 83 18-100 61-149 (176)
379 2vgo_A Serine/threonine-protei 98.3 4.2E-07 1.5E-11 81.1 4.2 86 325-410 15-133 (284)
380 3byv_A Rhoptry kinase; malaria 98.3 1E-07 3.6E-12 88.9 0.1 51 325-375 74-128 (377)
381 1fvr_A Tyrosine-protein kinase 98.3 4.5E-07 1.5E-11 82.8 4.4 86 325-410 26-161 (327)
382 2pzi_A Probable serine/threoni 98.3 3.6E-07 1.2E-11 92.1 4.0 87 324-410 80-201 (681)
383 2j0j_A Focal adhesion kinase 1 98.3 7.4E-07 2.5E-11 89.2 6.2 85 326-410 392-510 (656)
384 3h4j_B AMPK kdaid, SNF1-like p 98.3 2.4E-07 8.2E-12 84.9 2.5 85 325-409 10-126 (336)
385 3mwu_A Calmodulin-domain prote 98.3 7.9E-07 2.7E-11 85.9 6.1 85 326-410 24-140 (486)
386 1zar_A RIO2 kinase; serine kin 98.3 4.4E-07 1.5E-11 80.9 4.0 84 326-410 92-212 (282)
387 3hko_A Calcium/calmodulin-depe 98.3 2.8E-07 9.5E-12 84.8 2.5 57 320-376 22-84 (345)
388 3oz6_A Mitogen-activated prote 98.3 6.5E-07 2.2E-11 83.8 5.0 88 323-410 8-128 (388)
389 2i1m_A Macrophage colony-stimu 98.2 4.1E-07 1.4E-11 83.2 3.4 88 323-410 45-183 (333)
390 1q8y_A SR protein kinase; tran 98.2 7.9E-07 2.7E-11 82.6 5.2 84 325-410 20-150 (373)
391 1u46_A ACK-1, activated CDC42 98.2 4.6E-07 1.6E-11 81.0 3.4 86 325-410 19-140 (291)
392 3fhr_A MAP kinase-activated pr 98.2 1E-06 3.6E-11 80.7 5.8 86 324-410 28-147 (336)
393 2vwi_A Serine/threonine-protei 98.2 2.7E-07 9.2E-12 83.1 1.8 88 323-410 14-140 (303)
394 3eb0_A Putative uncharacterize 98.2 5.3E-07 1.8E-11 84.3 3.7 52 321-376 4-56 (383)
395 3lij_A Calcium/calmodulin depe 98.2 7.8E-07 2.7E-11 86.1 5.1 85 326-410 39-155 (494)
396 2xrw_A Mitogen-activated prote 98.2 6.7E-07 2.3E-11 83.2 4.3 87 324-410 25-146 (371)
397 3m2w_A MAP kinase-activated pr 98.2 2.2E-06 7.6E-11 77.0 7.4 76 330-410 24-136 (299)
398 2iwi_A Serine/threonine-protei 98.2 3.1E-07 1.1E-11 83.2 1.7 89 321-409 28-157 (312)
399 3a99_A Proto-oncogene serine/t 98.2 2.9E-07 9.8E-12 83.8 1.4 87 324-410 43-168 (320)
400 3qa8_A MGC80376 protein; kinas 98.2 2.4E-07 8.4E-12 91.7 1.0 87 324-410 14-140 (676)
401 3aln_A Dual specificity mitoge 98.2 1.2E-06 4E-11 79.9 5.4 86 324-409 22-143 (327)
402 3e3p_A Protein kinase, putativ 98.2 3E-06 1E-10 78.3 8.3 91 317-408 16-146 (360)
403 2v62_A Serine/threonine-protei 98.1 7.9E-07 2.7E-11 81.8 3.1 86 325-410 38-170 (345)
404 2rio_A Serine/threonine-protei 98.1 1.3E-06 4.4E-11 83.1 4.6 79 329-410 20-134 (434)
405 2r5t_A Serine/threonine-protei 98.1 6.9E-07 2.4E-11 83.0 2.5 87 324-410 38-158 (373)
406 2y4i_B KSR2, HKSR2, kinase sup 98.1 4.3E-07 1.5E-11 82.4 0.8 86 323-410 32-149 (319)
407 2dyl_A Dual specificity mitoge 98.1 1.1E-06 3.9E-11 79.5 2.8 86 324-409 25-142 (318)
408 4e7w_A Glycogen synthase kinas 98.0 7.7E-07 2.6E-11 83.5 0.8 81 326-410 42-160 (394)
409 3p23_A Serine/threonine-protei 98.0 8E-07 2.8E-11 84.4 0.6 83 323-410 23-137 (432)
410 3e4g_A ATP synthase subunit S, 97.9 3.2E-06 1.1E-10 68.7 2.0 34 114-147 62-95 (176)
411 3q60_A ROP5B; pseudokinase, tr 97.8 7.3E-06 2.5E-10 76.1 3.6 47 326-372 64-114 (371)
412 1zth_A RIO1 serine protein kin 97.8 5.3E-06 1.8E-10 72.9 2.1 82 329-410 52-190 (258)
413 3en9_A Glycoprotease, O-sialog 97.8 3E-05 1E-09 75.6 7.4 82 328-410 340-450 (540)
414 1pgv_A TMD-1, tropomodulin TMD 97.7 2.7E-05 9.2E-10 64.5 3.8 113 37-149 36-169 (197)
415 1pgv_A TMD-1, tropomodulin TMD 97.5 2.8E-05 9.7E-10 64.4 1.6 109 16-124 39-168 (197)
416 4gyi_A RIO2 kinase; protein ki 97.4 0.0001 3.5E-09 68.0 3.8 31 328-358 99-129 (397)
417 3rfe_A Platelet glycoprotein I 97.1 0.0011 3.9E-08 51.0 6.4 39 186-224 32-70 (130)
418 3rfe_A Platelet glycoprotein I 97.0 0.0007 2.4E-08 52.2 4.6 37 43-79 32-68 (130)
419 4azs_A Methyltransferase WBDD; 95.3 0.0066 2.3E-07 59.4 2.6 76 332-410 242-358 (569)
420 3d1u_A Putative fructosamine-3 93.5 0.1 3.5E-06 46.0 5.9 49 328-376 19-67 (288)
421 3tm0_A Aminoglycoside 3'-phosp 91.7 0.087 3E-06 45.6 2.9 84 321-409 11-123 (263)
422 2ks1_B Epidermal growth factor 91.1 0.18 6.1E-06 29.9 2.8 24 273-296 17-40 (44)
423 1nd4_A Aminoglycoside 3'-phosp 88.9 0.19 6.4E-06 43.2 2.5 71 333-410 29-126 (264)
424 3f7w_A Putative fructosamine-3 85.9 0.93 3.2E-05 39.6 5.2 51 326-376 17-67 (288)
425 2l2t_A Receptor tyrosine-prote 85.1 0.44 1.5E-05 28.2 1.7 19 277-295 20-38 (44)
426 3dxp_A Putative acyl-COA dehyd 84.2 1.6 5.5E-05 39.5 6.2 80 329-409 43-157 (359)
427 2lz0_A Uncharacterized protein 79.0 4.2 0.00014 29.1 5.5 45 30-75 8-52 (100)
428 2jwa_A Receptor tyrosine-prote 78.1 0.83 2.8E-05 27.0 1.2 26 270-295 14-39 (44)
429 2k1k_A Ephrin type-A receptor 70.4 1.9 6.3E-05 24.7 1.3 14 269-282 12-25 (38)
430 2lz0_A Uncharacterized protein 70.3 11 0.00038 26.8 5.9 44 150-194 9-52 (100)
431 2l9u_A Receptor tyrosine-prote 58.0 5.5 0.00019 21.7 1.6 22 273-294 12-33 (40)
432 3r70_A Aminoglycoside phosphot 54.7 28 0.00096 30.5 6.9 79 325-409 38-143 (320)
433 2k9y_A Ephrin type-A receptor 46.5 6.8 0.00023 22.6 0.9 8 286-293 32-39 (41)
434 3sg8_A APH(2'')-ID; antibiotic 45.8 19 0.00067 31.2 4.3 75 329-409 25-132 (304)
435 3jr1_A Putative fructosamine-3 45.6 57 0.0019 28.6 7.3 45 328-376 40-84 (312)
436 2olc_A MTR kinase, methylthior 43.4 27 0.00092 31.7 5.1 48 329-376 35-90 (397)
437 3ats_A Putative uncharacterize 41.8 38 0.0013 30.1 5.7 80 330-409 26-157 (357)
438 3tdw_A Gentamicin resistance p 38.0 32 0.0011 30.0 4.4 74 330-409 25-129 (306)
439 1iij_A ERBB-2 receptor protein 31.8 6.1 0.00021 22.0 -0.8 8 287-294 27-34 (35)
440 3ovc_A Hygromycin-B 4-O-kinase 30.3 43 0.0015 30.0 4.1 74 329-409 46-145 (362)
441 3cxl_A N-chimerin; SH2, RHO-GA 24.4 8.4 0.00029 36.2 -1.9 44 330-376 148-200 (463)
No 1
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.3e-36 Score=278.69 Aligned_cols=247 Identities=34% Similarity=0.554 Sum_probs=234.5
Q ss_pred CCCCcccc--cCChhcccCCcCCceeecC-cccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCc
Q 015202 1 MFNCNISG--SIPEEINNLTNLIAIYLGG-NKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNK 77 (411)
Q Consensus 1 l~~n~~~~--~~p~~~~~~~~L~~L~l~~-n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 77 (411)
|++|.++| .+|+.|.++++|++|+|++ |++.+.+|..|.++++|++|++++|.+++.+|..|.++++|++|++++|.
T Consensus 57 L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp EECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred CCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 46789999 9999999999999999995 99999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccCCccCCeeecccccCC-ccCccccCCC-CCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCC
Q 015202 78 LSGFVPSCFGNLTNLRKLYLGSNQLT-YIPLTLWNLK-YILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPT 155 (411)
Q Consensus 78 l~~~~~~~~~~l~~L~~L~l~~n~l~-~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 155 (411)
+.+.+|..+..+++|++|++++|.++ .+|..+..++ +|+.|++++|.+.+..|..+..+. |+.|++++|.+++..|.
T Consensus 137 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~ 215 (313)
T 1ogq_A 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASV 215 (313)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGG
T ss_pred cCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCH
Confidence 99999999999999999999999998 8999999998 999999999999999999999987 99999999999999999
Q ss_pred CccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCcc
Q 015202 156 TIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFS 235 (411)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~ 235 (411)
.+..+++|+.|++++|.+++..|. +..+++|++|++++|.+++.+|..+..+++|+.|++++|.+++.+|....++.+.
T Consensus 216 ~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~ 294 (313)
T 1ogq_A 216 LFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFD 294 (313)
T ss_dssp GCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSC
T ss_pred HHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccC
Confidence 999999999999999999976665 7889999999999999999999999999999999999999999999988889999
Q ss_pred ccccCCCCcccCCC
Q 015202 236 IESFKGNELLCGMP 249 (411)
Q Consensus 236 ~~~~~~n~~~c~~~ 249 (411)
.+++.+|+.+|+.|
T Consensus 295 ~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 295 VSAYANNKCLCGSP 308 (313)
T ss_dssp GGGTCSSSEEESTT
T ss_pred hHHhcCCCCccCCC
Confidence 99999999999864
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.2e-35 Score=304.46 Aligned_cols=257 Identities=36% Similarity=0.565 Sum_probs=209.8
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++.+|..|.++++|+.|++++|.+++.+|..+.++++|++|++++|.+++.+|..+.++++|++|++++|++++
T Consensus 425 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 504 (768)
T 3rgz_A 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTG 504 (768)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCC
Confidence 45666666777667777777777777777766677777777777777777777777777777777777777777777777
Q ss_pred cCCccccCCccCCeeecccccCC-ccCccccCCCCCcEEEcCCCeeeecCCCC---------------------------
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLT-YIPLTLWNLKYILYLNLSSNSFTIPLPSE--------------------------- 132 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~--------------------------- 132 (411)
.+|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++.+|..
T Consensus 505 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (768)
T 3rgz_A 505 EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMK 584 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCC
T ss_pred cCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccc
Confidence 77777777777777777777776 67777777888888888888777665543
Q ss_pred -------------------------------------------ccCccCCCeEEccCCeecccCCCCccCCCccCeeecc
Q 015202 133 -------------------------------------------IGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLE 169 (411)
Q Consensus 133 -------------------------------------------~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~ 169 (411)
+..+++|+.|++++|.++|.+|..++.+++|+.|+|+
T Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls 664 (768)
T 3rgz_A 585 KECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLG 664 (768)
T ss_dssp TTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECC
T ss_pred ccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCc
Confidence 3335678888999999999999999999999999999
Q ss_pred cccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccCCC
Q 015202 170 YNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 170 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 249 (411)
+|.+++.+|..+..+++|+.|++++|.++|.+|..+..+++|+.|++++|+++|.+|....+..+....+.+|+.+|+.+
T Consensus 665 ~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~ 744 (768)
T 3rgz_A 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP 744 (768)
T ss_dssp SSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT
T ss_pred CCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999899999999999999999965
Q ss_pred CCCCCCCCCCC
Q 015202 250 NLHVPPCRTGI 260 (411)
Q Consensus 250 ~~~~~~c~~~~ 260 (411)
.++|....
T Consensus 745 ---l~~C~~~~ 752 (768)
T 3rgz_A 745 ---LPRCDPSN 752 (768)
T ss_dssp ---SCCCCSCC
T ss_pred ---CcCCCCCc
Confidence 34787654
No 3
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.5e-32 Score=279.81 Aligned_cols=244 Identities=36% Similarity=0.543 Sum_probs=221.5
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++.+|..+.++++|+.|++++|.+++.+|..|.++++|++|++++|.+.+.+|..+..+++|++|++++|.+++
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 56888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccCCccCCeeecccccCC-ccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCC---
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLT-YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTT--- 156 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~--- 156 (411)
.+|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+++.+|..++.+++|+.|++++|.++|.+|..
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~ 560 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFK 560 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGT
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhc
Confidence 99999999999999999999998 88888999999999999999999999999999999999999999998766643
Q ss_pred -------------------------------------------------------------------ccCCCccCeeecc
Q 015202 157 -------------------------------------------------------------------IGGLKDLQYLFLE 169 (411)
Q Consensus 157 -------------------------------------------------------------------~~~~~~L~~L~l~ 169 (411)
+..+++|+.|+++
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs 640 (768)
T 3rgz_A 561 QSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMS 640 (768)
T ss_dssp TTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECC
T ss_pred ccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECc
Confidence 3345778999999
Q ss_pred cccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCCCCccccccCCCCc
Q 015202 170 YNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPFRNFSIESFKGNEL 244 (411)
Q Consensus 170 ~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~ 244 (411)
+|++++.+|..++.++.|+.|++++|.++|.+|..+..+++|+.||+++|.++|.+|.. ..+..+..+++++|+.
T Consensus 641 ~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l 716 (768)
T 3rgz_A 641 YNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNL 716 (768)
T ss_dssp SSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEE
T ss_pred CCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999865 4567788888888864
No 4
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.97 E-value=5.3e-32 Score=248.14 Aligned_cols=221 Identities=29% Similarity=0.431 Sum_probs=206.9
Q ss_pred CCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccC
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFV 82 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 82 (411)
.|.+.+.+|+.|.++++|++|+|++|.+++.+|..|.++++|++|++++|.+++.+|..+..+++|++|++++|.+++.+
T Consensus 86 ~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 165 (313)
T 1ogq_A 86 INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAI 165 (313)
T ss_dssp ETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEEC
T ss_pred CCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCc-cCCeeecccccCC-ccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCC
Q 015202 83 PSCFGNLT-NLRKLYLGSNQLT-YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 83 ~~~~~~l~-~L~~L~l~~n~l~-~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
|..+..++ +|+.|++++|.++ .+|..+..+. |+.|++++|.+.+..|..+..+++|+.|++++|.+++..|. +..+
T Consensus 166 p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l 243 (313)
T 1ogq_A 166 PDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLS 243 (313)
T ss_dssp CGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCC
T ss_pred CHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-cccc
Confidence 99999998 9999999999998 7888888887 99999999999999999999999999999999999977766 7789
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
++|+.|++++|.+++.+|..+..+++|+.|++++|.+++.+|.. ..+++|+.+++++|+..+..|
T Consensus 244 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEESTT
T ss_pred CCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCCC
Confidence 99999999999999999999999999999999999999988876 789999999999998554433
No 5
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.2e-31 Score=254.02 Aligned_cols=249 Identities=23% Similarity=0.216 Sum_probs=178.9
Q ss_pred CCCCcccccCC-hhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchh--hhccccCCeeeecCCc
Q 015202 1 MFNCNISGSIP-EEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYD--LCRLAALFQLDLGDNK 77 (411)
Q Consensus 1 l~~n~~~~~~p-~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~l~~L~~L~l~~n~ 77 (411)
+++|.+.+.+| ..|.++++|++|+|++|.+++..|..|.++++|++|++++|.+++..+.. +..+++|++|++++|.
T Consensus 61 L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~ 140 (455)
T 3v47_A 61 VEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNN 140 (455)
T ss_dssp CCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSB
T ss_pred CcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCc
Confidence 35666665554 45677777777777777777666667777777777777777766544433 6667777777777777
Q ss_pred ccccCCcc-ccCCccCCeeecccccCCccC-cccc----------------------------------CC---------
Q 015202 78 LSGFVPSC-FGNLTNLRKLYLGSNQLTYIP-LTLW----------------------------------NL--------- 112 (411)
Q Consensus 78 l~~~~~~~-~~~l~~L~~L~l~~n~l~~~p-~~~~----------------------------------~~--------- 112 (411)
+.+..|.. +..+++|+.|++++|.++.++ ..+. .+
T Consensus 141 l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls 220 (455)
T 3v47_A 141 IKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLS 220 (455)
T ss_dssp CCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECT
T ss_pred cCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecC
Confidence 76655554 566677777777766665332 1111 11
Q ss_pred ------------------------------------------------------CCCcEEEcCCCeeeecCCCCccCccC
Q 015202 113 ------------------------------------------------------KYILYLNLSSNSFTIPLPSEIGNLEV 138 (411)
Q Consensus 113 ------------------------------------------------------~~L~~L~l~~n~l~~~~~~~~~~l~~ 138 (411)
++|+.|++++|.+.+..|..+..+++
T Consensus 221 ~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 300 (455)
T 3v47_A 221 GNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTD 300 (455)
T ss_dssp TSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTT
T ss_pred CCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCC
Confidence 35566666666666666777888888
Q ss_pred CCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEccc
Q 015202 139 LVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSF 218 (411)
Q Consensus 139 L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 218 (411)
|+.|++++|.+++..|..|..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++
T Consensus 301 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 380 (455)
T 3v47_A 301 LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDT 380 (455)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCC
Confidence 88888888888888788888888888888888888877778888888888888888888877788888888888888888
Q ss_pred CcccccCCCC-CCCCCccccccCCCCcccCCC
Q 015202 219 NKLEGEIPRE-GPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 219 n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 249 (411)
|.+++..+.. ..++.++.+++.+|+..|.++
T Consensus 381 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 381 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 8888755543 456778888888888888765
No 6
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.2e-30 Score=240.58 Aligned_cols=216 Identities=21% Similarity=0.255 Sum_probs=131.5
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.++ .+|+.+.++++|++|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..+.++++|++|++++|.+.+.
T Consensus 89 ~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~ 165 (328)
T 4fcg_A 89 RSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTE 165 (328)
T ss_dssp ESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCC
T ss_pred cCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccc
Confidence 345554 55655666666666666666665 55555666666666666666665 4455566666666666666555555
Q ss_pred CCccccC---------CccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeeccc
Q 015202 82 VPSCFGN---------LTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGA 152 (411)
Q Consensus 82 ~~~~~~~---------l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 152 (411)
+|..+.. +++|+.|++++|.++.+|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|.+.+.
T Consensus 166 ~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~ 244 (328)
T 4fcg_A 166 LPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRN 244 (328)
T ss_dssp CCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCB
T ss_pred cChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhh
Confidence 5555433 56666666666666666666666666666666666665 3444566666666666666666666
Q ss_pred CCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcc
Q 015202 153 IPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKL 221 (411)
Q Consensus 153 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l 221 (411)
.|..+..+++|+.|++++|++.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.+++..+.+
T Consensus 245 ~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 245 YPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 666666666666666666666556666666666666666666666666666666666666666655443
No 7
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=2.5e-30 Score=234.01 Aligned_cols=239 Identities=26% Similarity=0.292 Sum_probs=205.6
Q ss_pred cCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCc-ccccCCcccc
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNK-LSGFVPSCFG 87 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~ 87 (411)
.+|..+ .++|+.|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|. +....+..+.
T Consensus 25 ~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~ 102 (285)
T 1ozn_A 25 AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFH 102 (285)
T ss_dssp SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTT
T ss_pred cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhc
Confidence 456644 4789999999999998888889999999999999999998888899999999999999997 8877788999
Q ss_pred CCccCCeeecccccCCcc-CccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCee
Q 015202 88 NLTNLRKLYLGSNQLTYI-PLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYL 166 (411)
Q Consensus 88 ~l~~L~~L~l~~n~l~~~-p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 166 (411)
.+++|+.|++++|.++.+ |..+..+++|++|++++|.+....+..+..+++|+.|++++|.+++..+..+..+++|+.|
T Consensus 103 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 182 (285)
T 1ozn_A 103 GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRL 182 (285)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEE
Confidence 999999999999999977 4567789999999999999997777779999999999999999998878889999999999
Q ss_pred ecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCccc
Q 015202 167 FLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLC 246 (411)
Q Consensus 167 ~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c 246 (411)
++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.+++++|++.+.++.......+.......+...|
T Consensus 183 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c 262 (285)
T 1ozn_A 183 LLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPC 262 (285)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBE
T ss_pred ECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCcccc
Confidence 99999999888999999999999999999999887788999999999999999999877643222222333334444455
Q ss_pred CCC
Q 015202 247 GMP 249 (411)
Q Consensus 247 ~~~ 249 (411)
..|
T Consensus 263 ~~p 265 (285)
T 1ozn_A 263 SLP 265 (285)
T ss_dssp EES
T ss_pred CCc
Confidence 443
No 8
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=1.2e-29 Score=243.66 Aligned_cols=229 Identities=24% Similarity=0.280 Sum_probs=107.0
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|..+++|+.|++
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 34445555555554444444555555555555555554444444555555555555555554443344444555555555
Q ss_pred ccccCCccCc-cccCCCCCcEEEcCCC-eeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccc
Q 015202 98 GSNQLTYIPL-TLWNLKYILYLNLSSN-SFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQG 175 (411)
Q Consensus 98 ~~n~l~~~p~-~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 175 (411)
++|.++.++. .+..+++|+.|++++| .+....+..|.++++|+.|++++|.++. +| .+..+++|+.|++++|.+++
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~ 221 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSA 221 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCc
Confidence 5555544433 2334455555555442 2222222344444555555555554442 22 23444445555555555544
Q ss_pred cCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCCCCccccccCCCCcccCC
Q 015202 176 SIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPFRNFSIESFKGNELLCGM 248 (411)
Q Consensus 176 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 248 (411)
..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+.. ..+..+..+++.+||+.|+|
T Consensus 222 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 222 IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 44444444555555555555554444444444455555555555444333322 22344444444555544443
No 9
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=249.92 Aligned_cols=249 Identities=24% Similarity=0.273 Sum_probs=147.6
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+.+
T Consensus 39 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~ 118 (477)
T 2id5_A 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVI 118 (477)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCE
T ss_pred CCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCcccc
Confidence 34555655555556666666666666665555555555555555555555555554444445555555555555555554
Q ss_pred cCCccccCCccCCeeeccccc------------------------CCccCc-cccCCCCCcEEEcCCCeeeecCCCCccC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQ------------------------LTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGN 135 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~------------------------l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 135 (411)
..+..|..+++|+.|++++|. ++.+|. .+..+++|+.|++++|.+.+..+..|..
T Consensus 119 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~ 198 (477)
T 2id5_A 119 LLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKR 198 (477)
T ss_dssp ECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCS
T ss_pred CChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhccc
Confidence 444444445555555554444 444432 2334455555555555544444434444
Q ss_pred ccCCCeEE------------------------ccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEe
Q 015202 136 LEVLVQID------------------------LSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLD 191 (411)
Q Consensus 136 l~~L~~L~------------------------l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 191 (411)
+++|+.|+ +++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|+
T Consensus 199 l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (477)
T 2id5_A 199 LYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQ 278 (477)
T ss_dssp CTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEE
T ss_pred CcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEE
Confidence 44333333 333444433223455667777777777777766667777777888888
Q ss_pred CCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCCCCccccccCCCCcccCCC
Q 015202 192 LSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 192 l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 249 (411)
+++|.+++..|..+..+++|+.|++++|.+++..+.. ..+..+..+++.+|++.|.+.
T Consensus 279 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 279 LVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 8888887777777778888888888888887655433 345667778888888887653
No 10
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=1.1e-29 Score=244.91 Aligned_cols=229 Identities=24% Similarity=0.258 Sum_probs=122.6
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
++|+.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|..+++|+.|++
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 45555555555555555555555555555555555555555555555555555555555555444444555555555555
Q ss_pred ccccCCccCc-cccCCCCCcEEEcCCC-eeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccc
Q 015202 98 GSNQLTYIPL-TLWNLKYILYLNLSSN-SFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQG 175 (411)
Q Consensus 98 ~~n~l~~~p~-~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 175 (411)
++|.++.+|. .+..+++|+.|++++| .+....+..|.++++|+.|++++|.+++. | .+..+++|+.|++++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 5555555543 3345555555555552 23322333455555555555555555532 2 24455555555555555555
Q ss_pred cCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCCCCccccccCCCCcccCC
Q 015202 176 SIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPFRNFSIESFKGNELLCGM 248 (411)
Q Consensus 176 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 248 (411)
..|..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+.. ..+..+..+++.+||+.|++
T Consensus 233 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 233 IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred cCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCC
Confidence 55555555555555555555555555555555555555555555555433322 23444555555555555544
No 11
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=3.5e-29 Score=240.54 Aligned_cols=224 Identities=25% Similarity=0.308 Sum_probs=208.2
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|+|++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+..
T Consensus 71 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 150 (440)
T 3zyj_A 71 LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 150 (440)
T ss_dssp CCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCE
T ss_pred ccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccc
Confidence 57899999999999999999999999999998888999999999999999999997777789999999999999999998
Q ss_pred cCCccccCCccCCeeeccc-ccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc
Q 015202 81 FVPSCFGNLTNLRKLYLGS-NQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~-n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
..+..|..+++|+.|++++ +.+..++. .+..+++|+.|++++|.++ .+| .+..+++|+.|++++|.+++..|..|.
T Consensus 151 ~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 228 (440)
T 3zyj_A 151 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQ 228 (440)
T ss_dssp ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTT
T ss_pred cCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhc
Confidence 8888999999999999998 45677766 5678999999999999998 555 488899999999999999999999999
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
.+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++.|.+.
T Consensus 229 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 229 GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp TCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCC
Confidence 99999999999999999999999999999999999999998888888999999999999999998775
No 12
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.3e-29 Score=241.52 Aligned_cols=225 Identities=25% Similarity=0.293 Sum_probs=208.6
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.|++..|+.|.++++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+..
T Consensus 82 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 161 (452)
T 3zyi_A 82 LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 161 (452)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCE
T ss_pred CcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcce
Confidence 57899999999999999999999999999999888999999999999999999998877789999999999999999998
Q ss_pred cCCccccCCccCCeeeccc-ccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc
Q 015202 81 FVPSCFGNLTNLRKLYLGS-NQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~-n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
..+..|..+++|+.|++++ |.+..++. .+..+++|+.|++++|.+++ +| .+..+++|+.|++++|.+++..|..|.
T Consensus 162 ~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 239 (452)
T 3zyi_A 162 IPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFH 239 (452)
T ss_dssp ECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGT
T ss_pred eCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCccccc
Confidence 8788899999999999998 56777776 46789999999999999984 44 588899999999999999999999999
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 227 (411)
.+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++.|.+..
T Consensus 240 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 240 GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTT
T ss_pred CccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCc
Confidence 999999999999999999899999999999999999999988888889999999999999999988753
No 13
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=3.5e-29 Score=241.74 Aligned_cols=244 Identities=23% Similarity=0.238 Sum_probs=199.2
Q ss_pred CCCCcccccCChhcccCCcCCceeecCccccccc-chhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSI-SIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
|++|.+++..|..|.++++|++|+|++|.+.+.+ +..|.++++|++|+|++|.+++..|..|.++++|++|++++|.++
T Consensus 37 Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 116 (455)
T 3v47_A 37 LSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLD 116 (455)
T ss_dssp CCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCB
T ss_pred ecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCC
Confidence 5789999999999999999999999999997544 668999999999999999999888999999999999999999998
Q ss_pred ccCCcc--ccCCccCCeeecccccCCcc-Ccc-ccCCCCCcEEEcCCCeeeecCCCCccCc-------------------
Q 015202 80 GFVPSC--FGNLTNLRKLYLGSNQLTYI-PLT-LWNLKYILYLNLSSNSFTIPLPSEIGNL------------------- 136 (411)
Q Consensus 80 ~~~~~~--~~~l~~L~~L~l~~n~l~~~-p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l------------------- 136 (411)
+..+.. +..+++|++|++++|.++.+ |.. +..+++|++|++++|.+.+..+..+..+
T Consensus 117 ~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~ 196 (455)
T 3v47_A 117 GAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMN 196 (455)
T ss_dssp THHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCS
T ss_pred ccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccc
Confidence 754444 89999999999999999977 544 7789999999999999987766555433
Q ss_pred ---------------cCC--------------------------------------------------------------
Q 015202 137 ---------------EVL-------------------------------------------------------------- 139 (411)
Q Consensus 137 ---------------~~L-------------------------------------------------------------- 139 (411)
++|
T Consensus 197 ~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (455)
T 3v47_A 197 EYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASG 276 (455)
T ss_dssp TTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSC
T ss_pred hhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccC
Confidence 334
Q ss_pred -CeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEccc
Q 015202 140 -VQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSF 218 (411)
Q Consensus 140 -~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 218 (411)
+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 4444444455555666777788888888888888877777888888888888888888877777888888888888888
Q ss_pred CcccccCCCC-CCCCCccccccCCCCc
Q 015202 219 NKLEGEIPRE-GPFRNFSIESFKGNEL 244 (411)
Q Consensus 219 n~l~~~~~~~-~~~~~~~~~~~~~n~~ 244 (411)
|.+++..|.. ..++.++.+++.+|..
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccChhhccccccccEEECCCCcc
Confidence 8887776643 4567777777777754
No 14
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.6e-29 Score=227.53 Aligned_cols=238 Identities=23% Similarity=0.314 Sum_probs=209.1
Q ss_pred cCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCccccc--CchhhhccccCCeeeecCCcccccCCccc
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGS--IPYDLCRLAALFQLDLGDNKLSGFVPSCF 86 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 86 (411)
.+|..+. ++|+.|+|++|+++...+..|.++++|++|++++|.++.. .+..+..+++|++|++++|.+.. +|..+
T Consensus 21 ~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~ 97 (306)
T 2z66_A 21 SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNF 97 (306)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEE
T ss_pred cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-Chhhc
Confidence 4666443 6899999999999966666789999999999999998743 36778889999999999999984 66778
Q ss_pred cCCccCCeeecccccCCccCc--cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecc-cCCCCccCCCcc
Q 015202 87 GNLTNLRKLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSG-AIPTTIGGLKDL 163 (411)
Q Consensus 87 ~~l~~L~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~~~L 163 (411)
..+++|+.|++++|.++.++. .+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+++ ..|..+..+++|
T Consensus 98 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 177 (306)
T 2z66_A 98 LGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 177 (306)
T ss_dssp ETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred CCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCC
Confidence 999999999999999998764 67889999999999999998888889999999999999999987 678899999999
Q ss_pred CeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCC-CCccccccCC
Q 015202 164 QYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPF-RNFSIESFKG 241 (411)
Q Consensus 164 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~-~~~~~~~~~~ 241 (411)
+.|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..|.. ..+ ..+..+++.+
T Consensus 178 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~ 257 (306)
T 2z66_A 178 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQ 257 (306)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTT
T ss_pred CEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccC
Confidence 99999999999888999999999999999999999888888899999999999999999877754 334 3788899999
Q ss_pred CCcccCCC
Q 015202 242 NELLCGMP 249 (411)
Q Consensus 242 n~~~c~~~ 249 (411)
|+..|.+.
T Consensus 258 N~~~~~c~ 265 (306)
T 2z66_A 258 NDFACTCE 265 (306)
T ss_dssp CCEECSGG
T ss_pred CCeecccC
Confidence 99888753
No 15
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.7e-29 Score=227.48 Aligned_cols=225 Identities=23% Similarity=0.199 Sum_probs=200.8
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccc--cchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGS--ISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKL 78 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 78 (411)
+++|.++..-+..|.++++|+.|+|++|.++.. .+..+..+++|++|++++|.+.. +|..+..+++|++|++++|.+
T Consensus 35 L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l 113 (306)
T 2z66_A 35 LESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNL 113 (306)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEE
T ss_pred CCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcc
Confidence 578888854445589999999999999999743 36788899999999999999984 566788999999999999999
Q ss_pred cccCC-ccccCCccCCeeecccccCCcc-CccccCCCCCcEEEcCCCeeee-cCCCCccCccCCCeEEccCCeecccCCC
Q 015202 79 SGFVP-SCFGNLTNLRKLYLGSNQLTYI-PLTLWNLKYILYLNLSSNSFTI-PLPSEIGNLEVLVQIDLSMNNFSGAIPT 155 (411)
Q Consensus 79 ~~~~~-~~~~~l~~L~~L~l~~n~l~~~-p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 155 (411)
++..+ ..+..+++|+.|++++|.++.+ +..+..+++|++|++++|.+.+ ..|..+..+++|+.|++++|.+++..|.
T Consensus 114 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 193 (306)
T 2z66_A 114 KQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 193 (306)
T ss_dssp ESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHH
Confidence 97655 5789999999999999999844 5567789999999999999986 5788999999999999999999988899
Q ss_pred CccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCC-CCCEEEcccCcccccCC
Q 015202 156 TIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLL-DLQHINVSFNKLEGEIP 226 (411)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~l~l~~n~l~~~~~ 226 (411)
.+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++..+..+..++ +|+.|++++|++++.++
T Consensus 194 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 194 AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp TTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGG
T ss_pred HhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccC
Confidence 999999999999999999988787899999999999999999999998898885 99999999999998765
No 16
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.5e-28 Score=227.17 Aligned_cols=216 Identities=24% Similarity=0.331 Sum_probs=115.2
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|.++. +|..+. ++|++|++++|.+.+.
T Consensus 60 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~ 136 (330)
T 1xku_A 60 QNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKV 136 (330)
T ss_dssp CSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBB
T ss_pred CCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEECCCCccccc
Confidence 4455555444455555555555555555554445555555555555555555542 222221 4555555555555544
Q ss_pred CCccccCCccCCeeecccccCC---ccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLT---YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~---~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
.+..+..+++|+.|++++|.++ ..+..+..+++|+.|++++|.+. .+|..+. ++|+.|++++|.+++..+..+.
T Consensus 137 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~ 213 (330)
T 1xku_A 137 RKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLK 213 (330)
T ss_dssp CHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGT
T ss_pred CHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhc
Confidence 4444555555555555555554 22334445555555555555555 2333332 4555566666655555555555
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccccc
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGE 224 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 224 (411)
.+++|+.|++++|.+++..+..+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++.
T Consensus 214 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 214 GLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp TCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred CCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCcc
Confidence 5566666666666665555555555566666666666655 4455555556666666666665543
No 17
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=244.59 Aligned_cols=248 Identities=20% Similarity=0.157 Sum_probs=169.3
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+++..+..|.++++|++|+|++|.+.+..+..|.++++|++|++++|.+.+..+..|.++++|++|++++|.+++.
T Consensus 88 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 167 (477)
T 2id5_A 88 RSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 167 (477)
T ss_dssp CSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC
T ss_pred CCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc
Confidence 45555544444455555555666655555555555555555555555555555555455555555555555555555543
Q ss_pred CCccccCCccCCeeecccccCC-------------------------ccCccccCCCCCcEEEcCCCeeeecCCCCccCc
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLT-------------------------YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNL 136 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~-------------------------~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 136 (411)
.+..+..+++|+.|++++|.+. .+|.......+|+.|++++|.++...+..+..+
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc
Confidence 3334444444444444444444 444444444567777777777774433568889
Q ss_pred cCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEc
Q 015202 137 EVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINV 216 (411)
Q Consensus 137 ~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l 216 (411)
++|+.|++++|.+++..+..|..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..+..+..+++|+.|++
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 327 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLIL 327 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEc
Confidence 99999999999999888899999999999999999999998999999999999999999999888888899999999999
Q ss_pred ccCcccccCCCCCCCCCccccccCCCCcccCCC
Q 015202 217 SFNKLEGEIPREGPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 217 ~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 249 (411)
++|++.|.++....+.......+.++...|..|
T Consensus 328 ~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p 360 (477)
T 2id5_A 328 DSNPLACDCRLLWVFRRRWRLNFNRQQPTCATP 360 (477)
T ss_dssp CSSCEECSGGGHHHHTTTTSSCCTTCCCBEEES
T ss_pred cCCCccCccchHhHHhhhhccccCccCceeCCc
Confidence 999999876532111122223445556666544
No 18
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=236.61 Aligned_cols=239 Identities=20% Similarity=0.251 Sum_probs=181.9
Q ss_pred cCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccC
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGN 88 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 88 (411)
.+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..+..
T Consensus 45 ~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 122 (353)
T 2z80_A 45 SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKP 122 (353)
T ss_dssp SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTT
T ss_pred ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCC
Confidence 4566554 47888888888887666667888888888888888888777777888888888888888887655455777
Q ss_pred CccCCeeecccccCCccCc--cccCCCCCcEEEcCCC-eeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCe
Q 015202 89 LTNLRKLYLGSNQLTYIPL--TLWNLKYILYLNLSSN-SFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQY 165 (411)
Q Consensus 89 l~~L~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 165 (411)
+++|+.|++++|+++.+|. .+..+++|++|++++| .+....+..+.++++|+.|++++|.+++..|..+..+++|+.
T Consensus 123 l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 202 (353)
T 2z80_A 123 LSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSH 202 (353)
T ss_dssp CTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEE
T ss_pred CccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCe
Confidence 8888888888888887776 5667888888888887 366556677788888888888888888777788888888888
Q ss_pred eecccccccccCCccccCCCCCCEEeCCCCccccc-------------------------------cchhhhcCCCCCEE
Q 015202 166 LFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA-------------------------------IPISLEKLLDLQHI 214 (411)
Q Consensus 166 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-------------------------------~~~~~~~l~~L~~l 214 (411)
|++++|.++...+..+..+++|+.|++++|.+++. +|..+..+++|+.|
T Consensus 203 L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L 282 (353)
T 2z80_A 203 LILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLEL 282 (353)
T ss_dssp EEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEE
T ss_pred ecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEE
Confidence 88888877644333344567777888777777653 35567788999999
Q ss_pred EcccCcccccCCCC-CCCCCccccccCCCCcccCCC
Q 015202 215 NVSFNKLEGEIPRE-GPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 215 ~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 249 (411)
++++|.++...+.. ..++.+..+++.+|+..|.++
T Consensus 283 ~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 283 EFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999998544443 567888999999999888654
No 19
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=1e-29 Score=254.93 Aligned_cols=236 Identities=22% Similarity=0.361 Sum_probs=186.6
Q ss_pred CCcccccCChhcccCCcCCceeecCcccccc-----------------cchhhh--CCCCCCeeecccCcccccCchhhh
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLNGS-----------------ISIALG--KLQKLQLLGLEDNQLEGSIPYDLC 63 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~-----------------~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~ 63 (411)
.|+++| +|+.|+++++|++|+|++|.+++. +|..+. ++++|++|++++|.+.+.+|+.+.
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 678888 899999999999999999999875 788887 999999999999998888898899
Q ss_pred ccccCCeeeecCCc-ccc-cCCccccCC------ccCCeeecccccCCccCc--cccCCCCCcEEEcCCCeeeecCCCCc
Q 015202 64 RLAALFQLDLGDNK-LSG-FVPSCFGNL------TNLRKLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFTIPLPSEI 133 (411)
Q Consensus 64 ~l~~L~~L~l~~n~-l~~-~~~~~~~~l------~~L~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~~~~~~~~ 133 (411)
++++|++|++++|. +++ .+|..+..+ ++|+.|++++|+++.+|. .+..+++|+.|++++|.+.+.+| .+
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~ 349 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AF 349 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CC
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hh
Confidence 99999999999998 887 778777766 889999999999888888 78888999999999998888888 78
Q ss_pred cCccCCCeEEccCCeecccCCCCccCCCc-cCeeecccccccccCCccccCCC--CCCEEeCCCCccccccchhhh----
Q 015202 134 GNLEVLVQIDLSMNNFSGAIPTTIGGLKD-LQYLFLEYNRLQGSIPDFIGGLI--NLKSLDLSNNNLSGAIPISLE---- 206 (411)
Q Consensus 134 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~---- 206 (411)
..+++|+.|++++|.++ .+|..+..+++ |+.|++++|.++ .+|..+...+ +|+.|++++|.+++..|..+.
T Consensus 350 ~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~ 427 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDP 427 (636)
T ss_dssp EEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCS
T ss_pred CCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccccc
Confidence 88888888888888887 66777888887 888888888887 5666665543 677777777777776666665
Q ss_pred ---cCCCCCEEEcccCcccccCCCC--CCCCCccccccCCCC
Q 015202 207 ---KLLDLQHINVSFNKLEGEIPRE--GPFRNFSIESFKGNE 243 (411)
Q Consensus 207 ---~l~~L~~l~l~~n~l~~~~~~~--~~~~~~~~~~~~~n~ 243 (411)
.+++|+.|++++|.++. +|.. ..++.+..+++.+|.
T Consensus 428 ~~~~~~~L~~L~Ls~N~l~~-lp~~~~~~l~~L~~L~Ls~N~ 468 (636)
T 4eco_A 428 TPFKGINVSSINLSNNQISK-FPKELFSTGSPLSSINLMGNM 468 (636)
T ss_dssp SCCCCCCEEEEECCSSCCCS-CCTHHHHTTCCCSEEECCSSC
T ss_pred ccccCCCCCEEECcCCccCc-CCHHHHccCCCCCEEECCCCC
Confidence 55667777777776663 3321 124455555555554
No 20
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.96 E-value=7.1e-29 Score=248.19 Aligned_cols=246 Identities=20% Similarity=0.251 Sum_probs=129.2
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCch-hhhccccCCeeeecCCccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPY-DLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~ 79 (411)
+++|.++ .+|+.+.++++|++|++++|.+.+..|..+.++++|++|++++|.+.+.++. .+..+++|++|++++|.+.
T Consensus 285 l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 363 (606)
T 3t6q_A 285 LTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIE 363 (606)
T ss_dssp CTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCC
T ss_pred ccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccc
Confidence 3456665 5666666666677777766666655555666666666666666655533332 3555555555555555555
Q ss_pred ccC--CccccCCccCCeeecccccCCcc-CccccCCCCCcEEEcCCCeeeecCCC-CccCccCCCeEEccCCeecccCCC
Q 015202 80 GFV--PSCFGNLTNLRKLYLGSNQLTYI-PLTLWNLKYILYLNLSSNSFTIPLPS-EIGNLEVLVQIDLSMNNFSGAIPT 155 (411)
Q Consensus 80 ~~~--~~~~~~l~~L~~L~l~~n~l~~~-p~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~~~~~~~ 155 (411)
+.. +..+..+++|+.|++++|.++.+ |..+..+++|+.|++++|.+.+..+. .+..+++|+.|++++|.+++..|.
T Consensus 364 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 443 (606)
T 3t6q_A 364 TSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQ 443 (606)
T ss_dssp EEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTT
T ss_pred cccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHH
Confidence 433 44455555555555555555433 33344455555555555554433322 244444455555555544444444
Q ss_pred CccCC---------------------------CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcC
Q 015202 156 TIGGL---------------------------KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKL 208 (411)
Q Consensus 156 ~~~~~---------------------------~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 208 (411)
.+..+ ++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+
T Consensus 444 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 523 (606)
T 3t6q_A 444 LFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHL 523 (606)
T ss_dssp TTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTC
T ss_pred HHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCcc
Confidence 44444 445555555555544444445555555555555555555555555555
Q ss_pred CCCCEEEcccCcccccCCCC-CCCCCccccccCCCCcccCC
Q 015202 209 LDLQHINVSFNKLEGEIPRE-GPFRNFSIESFKGNELLCGM 248 (411)
Q Consensus 209 ~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~~n~~~c~~ 248 (411)
+.| .|++++|.+++..|.. ..+..++.+++.+|++.|.+
T Consensus 524 ~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 524 KGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred ccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 555 5555555555443322 22344555566666666654
No 21
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.96 E-value=4.7e-29 Score=258.10 Aligned_cols=245 Identities=25% Similarity=0.272 Sum_probs=201.3
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+.+..|..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|++++|.+..
T Consensus 273 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 352 (844)
T 3j0a_A 273 LSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAI 352 (844)
T ss_dssp CTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCC
T ss_pred CCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCc
Confidence 46788888888889999999999999999998888889999999999999999988888889999999999999999988
Q ss_pred cCCccccCCccCCeeecccccCCccCc-----------------------------------------cccCCCCCcEEE
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPL-----------------------------------------TLWNLKYILYLN 119 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~-----------------------------------------~~~~~~~L~~L~ 119 (411)
..+..|..+++|+.|++++|.++.++. .+..+++|+.|+
T Consensus 353 ~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~ 432 (844)
T 3j0a_A 353 IQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILI 432 (844)
T ss_dssp CCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEE
T ss_pred cChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceee
Confidence 777788889999999998888775432 012466677777
Q ss_pred cCCCeeeecCCC-CccCccCCCeEEccCCeec-----ccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCC
Q 015202 120 LSSNSFTIPLPS-EIGNLEVLVQIDLSMNNFS-----GAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLS 193 (411)
Q Consensus 120 l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~~-----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 193 (411)
+++|.+++..+. .+..+++|+.|++++|.++ +..+..|..+++|+.|+|++|.+++..|..|..+++|+.|+++
T Consensus 433 Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (844)
T 3j0a_A 433 LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512 (844)
T ss_dssp EESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEE
T ss_pred CCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECC
Confidence 777776643322 3455677788888888776 3344667888999999999999998888889999999999999
Q ss_pred CCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccCCC
Q 015202 194 NNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 194 ~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 249 (411)
+|.+++..+..+. ++|+.|++++|.+++..|.. +..+..+++.+||+.|.|+
T Consensus 513 ~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 513 SNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred CCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 9999987776665 78999999999999888754 5688889999999999775
No 22
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=2.3e-28 Score=243.60 Aligned_cols=240 Identities=22% Similarity=0.242 Sum_probs=170.3
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+.+
T Consensus 82 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 161 (597)
T 3oja_B 82 LNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLER 161 (597)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCC
Confidence 35666666666666666666666666666666666666666667777776666665544455666667777777666666
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCC----------------------------------------CCcEEEc
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLK----------------------------------------YILYLNL 120 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~----------------------------------------~L~~L~l 120 (411)
..|..|..+++|+.|++++|.++.++. ..++ +|+.|++
T Consensus 162 ~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L 239 (597)
T 3oja_B 162 IEDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKL 239 (597)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCSBCCG--GGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEEC
T ss_pred CChhhhhcCCcCcEEECcCCCCCCcCh--hhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEEC
Confidence 666666666666666666666654431 1112 2333333
Q ss_pred CCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccc
Q 015202 121 SSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 121 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
++|.+++ +..+..+++|+.|++++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.++ .
T Consensus 240 ~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~ 315 (597)
T 3oja_B 240 QHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-H 315 (597)
T ss_dssp CSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-C
T ss_pred CCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-c
Confidence 3333332 2446778888999999999988888888899999999999999985 4556677889999999999998 5
Q ss_pred cchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccCC
Q 015202 201 IPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCGM 248 (411)
Q Consensus 201 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 248 (411)
+|..+..+++|+.|++++|.+++.. ...++.+..+++.+|++.|.+
T Consensus 316 i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 316 VERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred cCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 6777888999999999999987653 445778888999999988754
No 23
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=3.9e-28 Score=224.50 Aligned_cols=224 Identities=21% Similarity=0.202 Sum_probs=126.0
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
++|+.|++++|.+++..+..|.++++|++|++++|.+++..|..|.++++|++|++++|.++ .+|..+. ++|+.|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 45555555555555444445555555555555555555444555555555555555555555 2333222 45555555
Q ss_pred ccccCCccCcc-ccCCCCCcEEEcCCCeeee--cCCCCccCc--------------------cCCCeEEccCCeecccCC
Q 015202 98 GSNQLTYIPLT-LWNLKYILYLNLSSNSFTI--PLPSEIGNL--------------------EVLVQIDLSMNNFSGAIP 154 (411)
Q Consensus 98 ~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~--~~~~~~~~l--------------------~~L~~L~l~~n~~~~~~~ 154 (411)
++|.++.+|.. +..+++|+.|++++|.+.. ..+..+..+ ++|+.|++++|.+++..+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~ 210 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIEL 210 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCT
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCH
Confidence 55555544432 3445555555555555431 233333333 456666666666666666
Q ss_pred CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCC-----
Q 015202 155 TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREG----- 229 (411)
Q Consensus 155 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~----- 229 (411)
..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+...
T Consensus 211 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 289 (332)
T 2ft3_A 211 EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGF 289 (332)
T ss_dssp TSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSC
T ss_pred HHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcccccc
Confidence 66667777777777777777666666667777777777777776 455566677777777777777765443221
Q ss_pred --CCCCccccccCCCCcc
Q 015202 230 --PFRNFSIESFKGNELL 245 (411)
Q Consensus 230 --~~~~~~~~~~~~n~~~ 245 (411)
....+..+++.+|+..
T Consensus 290 ~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 290 GVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CSSSCCBSEEECCSSSSC
T ss_pred ccccccccceEeecCccc
Confidence 1233455566666554
No 24
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=5e-28 Score=228.88 Aligned_cols=238 Identities=22% Similarity=0.242 Sum_probs=134.0
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|++++|.++...+..|.++++|++|++++|.+.+.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 156 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERI 156 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCcc
Confidence 45555555555566666666666666666655555566666666666666666544333455566666666666666655
Q ss_pred CCccccCCccCCeeecccccCCccCccccCCC----------------------------------------CCcEEEcC
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLK----------------------------------------YILYLNLS 121 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~----------------------------------------~L~~L~l~ 121 (411)
.+..+..+++|+.|++++|.++.++. ..++ +|+.|+++
T Consensus 157 ~~~~~~~l~~L~~L~l~~n~l~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~ 234 (390)
T 3o6n_A 157 EDDTFQATTSLQNLQLSSNRLTHVDL--SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQ 234 (390)
T ss_dssp CTTTTSSCTTCCEEECCSSCCSBCCG--GGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECC
T ss_pred ChhhccCCCCCCEEECCCCcCCcccc--ccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECC
Confidence 55556666666666666665554321 1112 22223333
Q ss_pred CCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCcccccc
Q 015202 122 SNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAI 201 (411)
Q Consensus 122 ~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 201 (411)
+|.+++ ...+..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++ +|..+..+++|+.|++++|.++ .+
T Consensus 235 ~n~l~~--~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~ 310 (390)
T 3o6n_A 235 HNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HV 310 (390)
T ss_dssp SSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CC
T ss_pred CCCCcc--cHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ec
Confidence 333221 1234455666666666666666666666666666666666666653 3334455666666666666666 34
Q ss_pred chhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccC
Q 015202 202 PISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCG 247 (411)
Q Consensus 202 ~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~ 247 (411)
|..+..+++|+.|++++|.++... ...++.+..+++.+|++.|.
T Consensus 311 ~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 311 ERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp GGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHH
T ss_pred CccccccCcCCEEECCCCccceeC--chhhccCCEEEcCCCCccch
Confidence 445556666666666666665432 33455566666666665553
No 25
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=3.6e-28 Score=243.08 Aligned_cols=242 Identities=23% Similarity=0.281 Sum_probs=208.1
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCccccc--CchhhhccccCCeeeecCCccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGS--IPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
++|.+ +.+| .+ .+++|+.|++++|...+.. .+..+++|++|++++|.+++. .+..+..+++|++|++++|.+.
T Consensus 315 ~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 389 (606)
T 3vq2_A 315 IRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI 389 (606)
T ss_dssp ESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE
T ss_pred ccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc
Confidence 45666 6777 35 7777888888777554333 567889999999999998866 3788899999999999999998
Q ss_pred ccCCccccCCccCCeeecccccCCccCc--cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecc-cCCCC
Q 015202 80 GFVPSCFGNLTNLRKLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSG-AIPTT 156 (411)
Q Consensus 80 ~~~~~~~~~l~~L~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~ 156 (411)
+ +|..+..+++|+.|++++|.+..++. .+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+++ ..|..
T Consensus 390 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 390 I-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp E-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred c-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHh
Confidence 5 56889999999999999999986653 67789999999999999998899999999999999999999987 47889
Q ss_pred ccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCC-Ccc
Q 015202 157 IGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFR-NFS 235 (411)
Q Consensus 157 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~-~~~ 235 (411)
+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.++...+....++ ++.
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~ 548 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLA 548 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCC
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCc
Confidence 9999999999999999999889999999999999999999999889999999999999999999985444434454 488
Q ss_pred ccccCCCCcccCCC
Q 015202 236 IESFKGNELLCGMP 249 (411)
Q Consensus 236 ~~~~~~n~~~c~~~ 249 (411)
.+++.+|++.|.++
T Consensus 549 ~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 549 FFNLTNNSVACICE 562 (606)
T ss_dssp EEECCSCCCCCSST
T ss_pred EEEccCCCcccCCc
Confidence 89999999999875
No 26
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.2e-28 Score=225.36 Aligned_cols=220 Identities=22% Similarity=0.271 Sum_probs=196.5
Q ss_pred cCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCee
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKL 95 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 95 (411)
..++++.|+|++|.++ .+|..+.++++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|+.|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3478999999999998 67778889999999999999999 78888999999999999999999 779999999999999
Q ss_pred ecccccC-CccCccccC---------CCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCe
Q 015202 96 YLGSNQL-TYIPLTLWN---------LKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQY 165 (411)
Q Consensus 96 ~l~~n~l-~~~p~~~~~---------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 165 (411)
++++|++ ..+|..+.. +++|++|++++|.++ .+|..+.++++|+.|++++|.+++ +|..+..+++|+.
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~ 233 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEE 233 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCE
Confidence 9999765 578877654 999999999999998 888899999999999999999995 5667899999999
Q ss_pred eecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC-CCCCCccccccC
Q 015202 166 LFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE-GPFRNFSIESFK 240 (411)
Q Consensus 166 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~~~~~~~~~~ 240 (411)
|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|.. ..++.+..+.+.
T Consensus 234 L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~ 309 (328)
T 4fcg_A 234 LDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVP 309 (328)
T ss_dssp EECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECC
T ss_pred EECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCC
Confidence 999999999999999999999999999999999999999999999999999999999988854 334444444433
No 27
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.4e-28 Score=222.47 Aligned_cols=227 Identities=24% Similarity=0.258 Sum_probs=200.0
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCc-ccccCchhhhccccCCeeeecCCccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-LEGSIPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
+++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|++++|. ++...+..|..+++|++|++++|.++
T Consensus 39 l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 118 (285)
T 1ozn_A 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 118 (285)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred eeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCC
Confidence 57899999888899999999999999999998889999999999999999997 88777888999999999999999999
Q ss_pred ccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc
Q 015202 80 GFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 80 ~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
+..+..+..+++|+.|++++|.++.++.. +..+++|+.|++++|.++...+..+..+++|+.|++++|.+++..|..+.
T Consensus 119 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 198 (285)
T 1ozn_A 119 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFR 198 (285)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT
T ss_pred EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHcc
Confidence 88888999999999999999999988765 67899999999999999977777899999999999999999999999999
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE 228 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 228 (411)
.+++|+.|++++|.+++..+..+..+++|+.|++++|.+....+.. .....++.+..+.+.+.|..|..
T Consensus 199 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 199 DLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp TCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred CcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 9999999999999999877777999999999999999998554321 11122344456778888877754
No 28
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.96 E-value=6.7e-28 Score=244.34 Aligned_cols=249 Identities=24% Similarity=0.289 Sum_probs=195.7
Q ss_pred CCCCcccccCChhcccCCcCCceeecCc----------------------------ccccccchhhhCCCCCCeeecccC
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGN----------------------------KLNGSISIALGKLQKLQLLGLEDN 52 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n----------------------------~~~~~~~~~~~~l~~L~~L~l~~n 52 (411)
+++|.+++..|..|.++++|++|++++| ++++..|..|.++++|++|++++|
T Consensus 336 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 415 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLN 415 (680)
T ss_dssp CCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCC
Confidence 4567777777777777776666666544 444555666777777777777777
Q ss_pred cccccCc-hhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCC---ccCccccCCCCCcEEEcCCCeeeec
Q 015202 53 QLEGSIP-YDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLT---YIPLTLWNLKYILYLNLSSNSFTIP 128 (411)
Q Consensus 53 ~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---~~p~~~~~~~~L~~L~l~~n~l~~~ 128 (411)
.+.+.+| ..|.++++|++|++++|.+.+..+..|..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++.
T Consensus 416 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i 495 (680)
T 1ziw_A 416 EIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANI 495 (680)
T ss_dssp CCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCC
T ss_pred cCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcC
Confidence 7765444 56777777777777777777777777777788888888887764 5677788899999999999999877
Q ss_pred CCCCccCccCCCeEEccCCeecccCC--------CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccc
Q 015202 129 LPSEIGNLEVLVQIDLSMNNFSGAIP--------TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 129 ~~~~~~~l~~L~~L~l~~n~~~~~~~--------~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
.+..|.++++|+.|++++|.+++..+ ..+..+++|+.|++++|.++...+..|.++++|+.|++++|.+++.
T Consensus 496 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l 575 (680)
T 1ziw_A 496 NDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTL 575 (680)
T ss_dssp CTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcC
Confidence 77778899999999999999886532 2367889999999999999866666789999999999999999987
Q ss_pred cchhhhcCCCCCEEEcccCcccccCCCCC--CCCCccccccCCCCcccCCC
Q 015202 201 IPISLEKLLDLQHINVSFNKLEGEIPREG--PFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 201 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~~--~~~~~~~~~~~~n~~~c~~~ 249 (411)
.+..+..+++|+.|++++|.+++..+... .++.+..+++.+||+.|+|.
T Consensus 576 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 576 PASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 77778889999999999999987665432 45678889999999999875
No 29
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=9.4e-29 Score=252.73 Aligned_cols=189 Identities=22% Similarity=0.318 Sum_probs=136.0
Q ss_pred cchhhhCCCCCCeeecccCcccc-----------------cCchhhh--ccccCCeeeecCCcccccCCccccCCccCCe
Q 015202 34 ISIALGKLQKLQLLGLEDNQLEG-----------------SIPYDLC--RLAALFQLDLGDNKLSGFVPSCFGNLTNLRK 94 (411)
Q Consensus 34 ~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 94 (411)
+|..|.++++|++|+|++|.+++ .+|+.+. ++++|++|+|++|.+.+.+|..+..+++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 66677777778888887777776 2666655 7777788888777777777777777777777
Q ss_pred eeccccc-CCc--cCccccCCC-------CCcEEEcCCCeeeecCCC--CccCccCCCeEEccCCeecccCCCCccCCCc
Q 015202 95 LYLGSNQ-LTY--IPLTLWNLK-------YILYLNLSSNSFTIPLPS--EIGNLEVLVQIDLSMNNFSGAIPTTIGGLKD 162 (411)
Q Consensus 95 L~l~~n~-l~~--~p~~~~~~~-------~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~ 162 (411)
|++++|+ ++. +|..+..++ +|+.|++++|.+. .+|. .++++++|+.|++++|.++ .+| .|..+++
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~ 596 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVK 596 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCc
Confidence 7777776 663 666554443 7777777777777 6776 6777777777777777777 556 6777777
Q ss_pred cCeeecccccccccCCccccCCCC-CCEEeCCCCccccccchhhhcCCC--CCEEEcccCcccccCCC
Q 015202 163 LQYLFLEYNRLQGSIPDFIGGLIN-LKSLDLSNNNLSGAIPISLEKLLD--LQHINVSFNKLEGEIPR 227 (411)
Q Consensus 163 L~~L~l~~n~l~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~l~~--L~~l~l~~n~l~~~~~~ 227 (411)
|+.|++++|.++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|++++|.+++.+|.
T Consensus 597 L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 597 LTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp ESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred ceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 777777777777 66666777777 777777777777 55655555433 77777777777665553
No 30
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=4.7e-28 Score=217.99 Aligned_cols=217 Identities=25% Similarity=0.260 Sum_probs=193.8
Q ss_pred cCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccC
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGN 88 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 88 (411)
.+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..+..
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC
Confidence 4666554 57999999999999888889999999999999999999888888999999999999999999888889999
Q ss_pred CccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeec-CCCCccCccCCCeEEccCCeecccCCCCccCCCccC--
Q 015202 89 LTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIP-LPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQ-- 164 (411)
Q Consensus 89 l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~-- 164 (411)
+++|+.|++++|.++.++. .+..+++|++|++++|.+... +|..+..+++|+.|++++|.+++..+..+..+++|+
T Consensus 99 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l 178 (276)
T 2z62_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLL 178 (276)
T ss_dssp CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTC
T ss_pred CccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcccc
Confidence 9999999999999998765 678999999999999999863 588999999999999999999988888888777777
Q ss_pred --eeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC
Q 015202 165 --YLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE 228 (411)
Q Consensus 165 --~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 228 (411)
.|++++|.+++..+..+.. .+|+.|++++|.+++..+..+..+++|+.+++++|+++|.++..
T Consensus 179 ~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 179 NLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred ceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 8999999999776665544 58999999999999877777889999999999999999988754
No 31
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=1.9e-28 Score=245.71 Aligned_cols=239 Identities=22% Similarity=0.249 Sum_probs=207.0
Q ss_pred CCCCccccc-----------------CChhcc--cCCcCCceeecCcccccccchhhhCCCCCCeeecccCc-ccc-cCc
Q 015202 1 MFNCNISGS-----------------IPEEIN--NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-LEG-SIP 59 (411)
Q Consensus 1 l~~n~~~~~-----------------~p~~~~--~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~ 59 (411)
|++|.|+|. +|+.++ ++++|++|+|++|.+.+.+|..|.++++|++|++++|. +++ .+|
T Consensus 213 Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp 292 (636)
T 4eco_A 213 MGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLK 292 (636)
T ss_dssp EESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHH
T ss_pred CcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccch
Confidence 467888886 999998 99999999999999999999999999999999999998 988 788
Q ss_pred hhhhcc------ccCCeeeecCCcccccCCc--cccCCccCCeeecccccCC-ccCccccCCCCCcEEEcCCCeeeecCC
Q 015202 60 YDLCRL------AALFQLDLGDNKLSGFVPS--CFGNLTNLRKLYLGSNQLT-YIPLTLWNLKYILYLNLSSNSFTIPLP 130 (411)
Q Consensus 60 ~~~~~l------~~L~~L~l~~n~l~~~~~~--~~~~l~~L~~L~l~~n~l~-~~p~~~~~~~~L~~L~l~~n~l~~~~~ 130 (411)
..+..+ ++|++|++++|.++ .+|. .+..+++|+.|++++|.++ .+| .+..+++|+.|++++|.+. .+|
T Consensus 293 ~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp 369 (636)
T 4eco_A 293 DDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIP 369 (636)
T ss_dssp HHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECC
T ss_pred HHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-ccc
Confidence 888876 99999999999999 7888 8999999999999999999 999 8889999999999999999 888
Q ss_pred CCccCccC-CCeEEccCCeecccCCCCccCCC--ccCeeecccccccccCCcccc-------CCCCCCEEeCCCCccccc
Q 015202 131 SEIGNLEV-LVQIDLSMNNFSGAIPTTIGGLK--DLQYLFLEYNRLQGSIPDFIG-------GLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 131 ~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~~--~L~~L~l~~n~l~~~~~~~~~-------~~~~L~~L~l~~n~l~~~ 200 (411)
..+..+++ |+.|++++|.++ .+|..+...+ +|+.|++++|.+++..|..+. .+++|+.|++++|.+++.
T Consensus 370 ~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~l 448 (636)
T 4eco_A 370 ANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKF 448 (636)
T ss_dssp TTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSC
T ss_pred HhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcC
Confidence 88999999 999999999998 7787776654 899999999999988888887 778999999999999965
Q ss_pred cchhhhcCCCCCEEEcccCcccccCCCC-CCC--------CCccccccCCCCc
Q 015202 201 IPISLEKLLDLQHINVSFNKLEGEIPRE-GPF--------RNFSIESFKGNEL 244 (411)
Q Consensus 201 ~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~--------~~~~~~~~~~n~~ 244 (411)
.+..+..+++|+.|++++|.++ .+|.. ... ..++.+++.+|..
T Consensus 449 p~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 500 (636)
T 4eco_A 449 PKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKL 500 (636)
T ss_dssp CTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCC
T ss_pred CHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcC
Confidence 5555666899999999999998 44432 111 1677777777754
No 32
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.95 E-value=3.8e-27 Score=236.70 Aligned_cols=126 Identities=20% Similarity=0.177 Sum_probs=104.0
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|+|++..|..|.++++|++|+|++|+++++.+.+|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++
T Consensus 59 Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~ 138 (635)
T 4g8a_A 59 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 138 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC
Confidence 57889988888889999999999999999988888889999999999999999987777788889999999999998887
Q ss_pred cCCccccCCccCCeeecccccCCc--cCccccCCCCCcEEEcCCCeee
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTY--IPLTLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~--~p~~~~~~~~L~~L~l~~n~l~ 126 (411)
..+..|+++++|+.|++++|.++. +|..+..+++|++|++++|.++
T Consensus 139 l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 139 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccc
Confidence 777778888888888888888763 4556666777777777666543
No 33
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=2.8e-27 Score=218.62 Aligned_cols=217 Identities=22% Similarity=0.285 Sum_probs=195.6
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++..|..|.++++|++|++++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.+..
T Consensus 83 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 159 (330)
T 1xku_A 83 LINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS 159 (330)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG
T ss_pred CCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc
Confidence 5789999999999999999999999999998 4454433 799999999999998888889999999999999999964
Q ss_pred --cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc
Q 015202 81 --FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 81 --~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
..+..+..+++|+.|++++|.++.+|..+. ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..+.
T Consensus 160 ~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 160 SGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp GGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred cCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 677889999999999999999999998765 8999999999999988889999999999999999999988888999
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhc------CCCCCEEEcccCcccc
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEK------LLDLQHINVSFNKLEG 223 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------l~~L~~l~l~~n~l~~ 223 (411)
.+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+..+.. .+.++.+++++|++..
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc
Confidence 9999999999999998 77888999999999999999999877766643 3678999999999864
No 34
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=5.2e-29 Score=232.40 Aligned_cols=227 Identities=21% Similarity=0.223 Sum_probs=197.0
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|.++.
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 138 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT 138 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc
Confidence 57899998777789999999999999999998888899999999999999999997766669999999999999999996
Q ss_pred cCC-ccccCCccCCeeecccc-cCCccC-ccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCc
Q 015202 81 FVP-SCFGNLTNLRKLYLGSN-QLTYIP-LTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTI 157 (411)
Q Consensus 81 ~~~-~~~~~l~~L~~L~l~~n-~l~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 157 (411)
..+ ..+..+++|+.|++++| .++.++ ..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.++...+..+
T Consensus 139 l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~ 218 (353)
T 2z80_A 139 LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFV 218 (353)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHH
T ss_pred cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhh
Confidence 544 47899999999999999 577664 567889999999999999998889999999999999999999875544445
Q ss_pred cCCCccCeeecccccccccC-------------------------------CccccCCCCCCEEeCCCCccccccchhhh
Q 015202 158 GGLKDLQYLFLEYNRLQGSI-------------------------------PDFIGGLINLKSLDLSNNNLSGAIPISLE 206 (411)
Q Consensus 158 ~~~~~L~~L~l~~n~l~~~~-------------------------------~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 206 (411)
..+++|+.|++++|.+++.. |..+..+++|+.|++++|.++...+..+.
T Consensus 219 ~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~ 298 (353)
T 2z80_A 219 DVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFD 298 (353)
T ss_dssp HHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred hhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHh
Confidence 56889999999999988643 23456788999999999999955444568
Q ss_pred cCCCCCEEEcccCcccccCCC
Q 015202 207 KLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 207 ~l~~L~~l~l~~n~l~~~~~~ 227 (411)
.+++|+.|++++|++.|.+|.
T Consensus 299 ~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 299 RLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TCTTCCEEECCSSCBCCCHHH
T ss_pred cCCCCCEEEeeCCCccCcCCC
Confidence 999999999999999988763
No 35
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=5.7e-27 Score=234.38 Aligned_cols=243 Identities=22% Similarity=0.235 Sum_probs=216.2
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++..|..|.++++|++|++++|.++ .+|..+.++++|++|++++|.+++..|..+..+++|++|++++|.+.+
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 4678888888888999999999999999998 677789999999999999999998888899999999999999999986
Q ss_pred cCCc-cccCCccCCeeecccccCCcc---CccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCC-
Q 015202 81 FVPS-CFGNLTNLRKLYLGSNQLTYI---PLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPT- 155 (411)
Q Consensus 81 ~~~~-~~~~l~~L~~L~l~~n~l~~~---p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~- 155 (411)
.++. .+..+++|+.|++++|.++.+ +..+..+++|++|++++|.+.+..|..+..+++|+.|++++|.+++..+.
T Consensus 340 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 419 (606)
T 3t6q_A 340 ELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS 419 (606)
T ss_dssp BCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC
T ss_pred ccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch
Confidence 6655 489999999999999999865 66788999999999999999988899999999999999999999877654
Q ss_pred CccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccc---cchhhhcCCCCCEEEcccCcccccCCCC-CCC
Q 015202 156 TIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA---IPISLEKLLDLQHINVSFNKLEGEIPRE-GPF 231 (411)
Q Consensus 156 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~l~l~~n~l~~~~~~~-~~~ 231 (411)
.+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++. .+..+..+++|+.|++++|.+++..|.. ..+
T Consensus 420 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 499 (606)
T 3t6q_A 420 PFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSL 499 (606)
T ss_dssp TTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTC
T ss_pred hhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccc
Confidence 488999999999999999988899999999999999999999863 2357889999999999999999887654 557
Q ss_pred CCccccccCCCCc
Q 015202 232 RNFSIESFKGNEL 244 (411)
Q Consensus 232 ~~~~~~~~~~n~~ 244 (411)
+.++.+++.+|..
T Consensus 500 ~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 500 KMMNHVDLSHNRL 512 (606)
T ss_dssp TTCCEEECCSSCC
T ss_pred cCCCEEECCCCcc
Confidence 7888888888854
No 36
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.95 E-value=5.3e-27 Score=237.76 Aligned_cols=227 Identities=21% Similarity=0.224 Sum_probs=206.0
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccc-hhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSIS-IALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
+++|++++..|..|.++++|+.|+|++|.+++.+| ..|.++++|++|++++|.+.+..+..|..+++|++|++++|.+.
T Consensus 388 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 467 (680)
T 1ziw_A 388 LTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALK 467 (680)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCB
T ss_pred CCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccc
Confidence 46899999999999999999999999999987665 78999999999999999999888899999999999999999987
Q ss_pred --ccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCC--------CCccCccCCCeEEccCCe
Q 015202 80 --GFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLP--------SEIGNLEVLVQIDLSMNN 148 (411)
Q Consensus 80 --~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~--------~~~~~l~~L~~L~l~~n~ 148 (411)
+..|..+..+++|+.|++++|+++.+|.. +..+++|+.|++++|.+++..+ ..+.++++|+.|++++|.
T Consensus 468 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~ 547 (680)
T 1ziw_A 468 NVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNG 547 (680)
T ss_dssp CTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSC
T ss_pred ccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCC
Confidence 56788999999999999999999988765 6789999999999999985422 237889999999999999
Q ss_pred ecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhh-cCCCCCEEEcccCcccccCCC
Q 015202 149 FSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLE-KLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 149 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~l~l~~n~l~~~~~~ 227 (411)
++...+..|..+++|+.|++++|++++..+..|..+++|+.|++++|.+++..+..+. .+++|+.+++++|++.|.++.
T Consensus 548 l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 548 FDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9976667899999999999999999988888889999999999999999988888787 789999999999999999875
No 37
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=8.4e-28 Score=233.16 Aligned_cols=223 Identities=23% Similarity=0.251 Sum_probs=194.1
Q ss_pred ccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCe
Q 015202 15 NNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRK 94 (411)
Q Consensus 15 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 94 (411)
..+++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++|++|+|++|.+++.. ..++|+.
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 344589999999999998888999999999999999999987766 889999999999999998643 2389999
Q ss_pred eecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCcc-CCCccCeeecccccc
Q 015202 95 LYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIG-GLKDLQYLFLEYNRL 173 (411)
Q Consensus 95 L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~-~~~~L~~L~l~~n~l 173 (411)
|++++|.++.++.. .+++|+.|++++|.+++..|..++.+++|+.|++++|.+++..|..+. .+++|+.|+|++|.+
T Consensus 104 L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 104 LHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp EECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred EECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 99999999987654 468999999999999988888999999999999999999988888776 789999999999999
Q ss_pred cccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccCCC
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~~ 249 (411)
++..+ ...+++|+.|++++|.+++..| .+..+++|+.|++++|.+++..+....++.+..+++.+|+..|+..
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~ 254 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTL 254 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHH
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcch
Confidence 97643 3468999999999999997544 5889999999999999999866665667888899999999887643
No 38
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4.3e-28 Score=222.15 Aligned_cols=232 Identities=20% Similarity=0.199 Sum_probs=123.7
Q ss_pred CCcccccCChhcccCCcCCceeecCcccc-cccchhhh-------CCCCCCeeecccCcccccCchhh--hccccCCeee
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLN-GSISIALG-------KLQKLQLLGLEDNQLEGSIPYDL--CRLAALFQLD 72 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~-~~~~~~~~-------~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~ 72 (411)
+|.+ .+|..+... |+.|+|++|.+. ..+|..+. ++++|++|++++|.+++..|..+ ..+++|++|+
T Consensus 52 ~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~ 127 (312)
T 1wwl_A 52 VDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILN 127 (312)
T ss_dssp CCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEE
T ss_pred cccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEE
Confidence 4444 555554433 556666666652 33444333 55666666666666655555543 5566666666
Q ss_pred ecCCcccccCCccccCC-----ccCCeeecccccCCccC-ccccCCCCCcEEEcCCCeeeec--CCCCc--cCccCCCeE
Q 015202 73 LGDNKLSGFVPSCFGNL-----TNLRKLYLGSNQLTYIP-LTLWNLKYILYLNLSSNSFTIP--LPSEI--GNLEVLVQI 142 (411)
Q Consensus 73 l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~p-~~~~~~~~L~~L~l~~n~l~~~--~~~~~--~~l~~L~~L 142 (411)
+++|.+++. |..+..+ ++|++|++++|+++.++ ..+..+++|++|++++|.+.+. .+..+ ..+++|++|
T Consensus 128 Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L 206 (312)
T 1wwl_A 128 LRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVL 206 (312)
T ss_dssp EESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEE
T ss_pred ccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEE
Confidence 666666544 5555544 56666666666665544 4455566666666666654432 12222 555566666
Q ss_pred EccCCeecc---cCCCCccCCCccCeeecccccccccCC-ccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEccc
Q 015202 143 DLSMNNFSG---AIPTTIGGLKDLQYLFLEYNRLQGSIP-DFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSF 218 (411)
Q Consensus 143 ~l~~n~~~~---~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 218 (411)
++++|.+++ .....+..+++|+.|++++|.+++..| ..+..+++|+.|++++|.++ .+|..+. ++|+.|++++
T Consensus 207 ~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~ 283 (312)
T 1wwl_A 207 ALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSY 283 (312)
T ss_dssp ECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCS
T ss_pred ECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCC
Confidence 666665552 111223345566666666666655443 23344556666666666665 3444433 5566666666
Q ss_pred CcccccCCCCCCCCCccccccCCCC
Q 015202 219 NKLEGEIPREGPFRNFSIESFKGNE 243 (411)
Q Consensus 219 n~l~~~~~~~~~~~~~~~~~~~~n~ 243 (411)
|.+++. |....++.++.+++.+|+
T Consensus 284 N~l~~~-p~~~~l~~L~~L~L~~N~ 307 (312)
T 1wwl_A 284 NRLDRN-PSPDELPQVGNLSLKGNP 307 (312)
T ss_dssp SCCCSC-CCTTTSCEEEEEECTTCT
T ss_pred CCCCCC-hhHhhCCCCCEEeccCCC
Confidence 666554 334445555555555554
No 39
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-27 Score=219.46 Aligned_cols=235 Identities=22% Similarity=0.234 Sum_probs=200.9
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
+.+.+....+..+..+++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|++++|.+++.
T Consensus 18 s~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l 95 (317)
T 3o53_A 18 TDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL 95 (317)
T ss_dssp CTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE
T ss_pred cccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc
Confidence 4566666666667788899999999999998888899999999999999999987655 88999999999999999854
Q ss_pred CCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCc-cCC
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTI-GGL 160 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~-~~~ 160 (411)
. ..++|+.|++++|.++.++.. .+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+ ..+
T Consensus 96 ~-----~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 168 (317)
T 3o53_A 96 L-----VGPSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASS 168 (317)
T ss_dssp E-----ECTTCCEEECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGT
T ss_pred c-----CCCCcCEEECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhcc
Confidence 3 348999999999999987654 36889999999999998778889999999999999999998777766 468
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccC
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFK 240 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~ 240 (411)
++|+.|++++|.+++..+ ...+++|+.|++++|.+++. |..+..+++|+.|++++|.++...+....++.+..+++.
T Consensus 169 ~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~ 245 (317)
T 3o53_A 169 DTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLR 245 (317)
T ss_dssp TTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECT
T ss_pred CcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEcc
Confidence 999999999999986633 34589999999999999965 445889999999999999999765555667888999999
Q ss_pred CCCcccCC
Q 015202 241 GNELLCGM 248 (411)
Q Consensus 241 ~n~~~c~~ 248 (411)
+|+..|+.
T Consensus 246 ~N~~~~~~ 253 (317)
T 3o53_A 246 GNGFHCGT 253 (317)
T ss_dssp TCCCBHHH
T ss_pred CCCccCcC
Confidence 99887753
No 40
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=4.6e-27 Score=217.31 Aligned_cols=236 Identities=24% Similarity=0.246 Sum_probs=177.6
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++..|..|.++++|++|++++|.+++..|..|.++++|++|++++|.++. +|..+. ++|++|++++|.+..
T Consensus 61 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~ 137 (332)
T 2ft3_A 61 LQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRK 137 (332)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCc-cCcccc--ccCCEEECCCCccCc
Confidence 56788888888888888899999999888888778888888888888888888773 333222 456666666666654
Q ss_pred cCCccccCCccCCeeecccccC-------------------------CccCccccCCCCCcEEEcCCCeeeecCCCCccC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQL-------------------------TYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGN 135 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l-------------------------~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 135 (411)
..+..+..+++|+.|++++|.+ +.+|..+. ++|++|++++|.+.+..+..+..
T Consensus 138 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~ 215 (332)
T 2ft3_A 138 VPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLR 215 (332)
T ss_dssp CCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTT
T ss_pred cCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcC
Confidence 4444455555555555555554 44443332 67888999999988777788999
Q ss_pred ccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhc------CC
Q 015202 136 LEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEK------LL 209 (411)
Q Consensus 136 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~------l~ 209 (411)
+++|+.|++++|.+++..+..+..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+..+.. .+
T Consensus 216 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 294 (332)
T 2ft3_A 216 YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRA 294 (332)
T ss_dssp CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSC
T ss_pred CCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccc
Confidence 999999999999999888888999999999999999998 77888999999999999999999877766654 36
Q ss_pred CCCEEEcccCcccc--cCCCC-CCCCCccccccCCC
Q 015202 210 DLQHINVSFNKLEG--EIPRE-GPFRNFSIESFKGN 242 (411)
Q Consensus 210 ~L~~l~l~~n~l~~--~~~~~-~~~~~~~~~~~~~n 242 (411)
+|+.+++++|++.. ..|.. ..+..+..+++.+|
T Consensus 295 ~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 295 YYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp CBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 78999999999873 23221 23444555555444
No 41
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1.9e-27 Score=224.88 Aligned_cols=233 Identities=21% Similarity=0.189 Sum_probs=137.3
Q ss_pred CCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccC
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFV 82 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 82 (411)
+|.++..-+..|.++++|++|+|++|.+++..+..|.++++|++|++++|.+++..|..|.++++|++|++++|.++...
T Consensus 54 ~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 133 (390)
T 3o6n_A 54 NSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLP 133 (390)
T ss_dssp SCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCC
Confidence 34443333333566667777777777666655666666777777777777666666666666667777777777666444
Q ss_pred CccccCCccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccC-------------------CCeE
Q 015202 83 PSCFGNLTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEV-------------------LVQI 142 (411)
Q Consensus 83 ~~~~~~l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-------------------L~~L 142 (411)
+..|..+++|+.|++++|.++.++. .+..+++|++|++++|.++... +..+++ |+.|
T Consensus 134 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L 210 (390)
T 3o6n_A 134 RGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEEL 210 (390)
T ss_dssp TTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEE
T ss_pred HHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEE
Confidence 4445666677777777776665533 3556666777777766665321 122222 2233
Q ss_pred EccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccc
Q 015202 143 DLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLE 222 (411)
Q Consensus 143 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 222 (411)
++++|.+..... . ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.++
T Consensus 211 ~l~~n~l~~~~~-~--~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 285 (390)
T 3o6n_A 211 DASHNSINVVRG-P--VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 285 (390)
T ss_dssp ECCSSCCCEEEC-C--CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC
T ss_pred ECCCCeeeeccc-c--ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc
Confidence 333333322111 1 123566666666666532 35666677777777777777666666777777777777777776
Q ss_pred ccCCCCCCCCCccccccCCCC
Q 015202 223 GEIPREGPFRNFSIESFKGNE 243 (411)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~n~ 243 (411)
+.......++.+..+++.+|.
T Consensus 286 ~~~~~~~~l~~L~~L~L~~n~ 306 (390)
T 3o6n_A 286 ALNLYGQPIPTLKVLDLSHNH 306 (390)
T ss_dssp EEECSSSCCTTCCEEECCSSC
T ss_pred ccCcccCCCCCCCEEECCCCc
Confidence 554444455566666666654
No 42
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.95 E-value=8.7e-27 Score=210.83 Aligned_cols=206 Identities=24% Similarity=0.226 Sum_probs=185.7
Q ss_pred cccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
+.++++++.+++++++++. +|..+. +++++|+|++|.+++..+..|.++++|++|++++|.+++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 7889999999999999984 444442 6899999999999988888999999999999999999965443 7889999
Q ss_pred eeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 94 KLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.|++++|.++.+|..+..+++|+.|++++|.++...+..|.++++|+.|++++|.+++..+..|..+++|+.|++++|++
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 99999999999999899999999999999999977778899999999999999999988888899999999999999999
Q ss_pred cccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccC
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 225 (411)
++..+..+..+++|+.|++++|.++ .+|..+...++|+.+++++|++.|.+
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCcC
Confidence 9777778889999999999999999 56777778889999999999998765
No 43
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2e-27 Score=236.83 Aligned_cols=237 Identities=21% Similarity=0.175 Sum_probs=143.4
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+...-|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++..
T Consensus 59 ~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l 138 (597)
T 3oja_B 59 KNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSL 138 (597)
T ss_dssp SSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred eCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCC
Confidence 44555554445567788888888888888777777788888888888888888777777777888888888888888765
Q ss_pred CCccccCCccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccC----------------ccCCCeEEc
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGN----------------LEVLVQIDL 144 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~----------------l~~L~~L~l 144 (411)
.+..|..+++|+.|++++|.++.++. .+..+++|+.|++++|.+++.....+.+ ..+|+.|++
T Consensus 139 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~l 218 (597)
T 3oja_B 139 PRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDA 218 (597)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEEC
T ss_pred CHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeec
Confidence 55566778888888888888876544 5667788888888888776432221111 112222333
Q ss_pred cCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccccc
Q 015202 145 SMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGE 224 (411)
Q Consensus 145 ~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 224 (411)
++|.++...+.. .++|+.|++++|.+++ +..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++.
T Consensus 219 s~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l 293 (597)
T 3oja_B 219 SHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVAL 293 (597)
T ss_dssp CSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEE
T ss_pred cCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCC
Confidence 333322111111 1345555555555543 23445555555555555555555555555555555555555555554
Q ss_pred CCCCCCCCCccccccCCCC
Q 015202 225 IPREGPFRNFSIESFKGNE 243 (411)
Q Consensus 225 ~~~~~~~~~~~~~~~~~n~ 243 (411)
.+....++.+..+++.+|.
T Consensus 294 ~~~~~~l~~L~~L~Ls~N~ 312 (597)
T 3oja_B 294 NLYGQPIPTLKVLDLSHNH 312 (597)
T ss_dssp ECSSSCCTTCCEEECCSSC
T ss_pred CcccccCCCCcEEECCCCC
Confidence 3333334455555555443
No 44
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=3.9e-27 Score=240.84 Aligned_cols=231 Identities=19% Similarity=0.196 Sum_probs=195.7
Q ss_pred cCChhcc--cCCcCCceeecCcccccccchhhhCCCCCCeeecccCc-ccc-cCchhhhccc-------cCCeeeecCCc
Q 015202 9 SIPEEIN--NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-LEG-SIPYDLCRLA-------ALFQLDLGDNK 77 (411)
Q Consensus 9 ~~p~~~~--~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~~~~~~~l~-------~L~~L~l~~n~ 77 (411)
.+|+.++ ++++|+.|+|++|++.+.+|..|.++++|++|+|++|+ +++ .+|..+..++ +|++|+|++|.
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 5999987 99999999999999999999999999999999999998 888 7888887776 99999999999
Q ss_pred ccccCCc--cccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccC-CCeEEccCCeecccCC
Q 015202 78 LSGFVPS--CFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEV-LVQIDLSMNNFSGAIP 154 (411)
Q Consensus 78 l~~~~~~--~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~ 154 (411)
++ .+|. .+..+++|+.|++++|.++.+| .+..+++|+.|++++|.+. .+|..+..+++ |+.|++++|.++ .+|
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp 635 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIP 635 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCC
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCc
Confidence 99 7888 8999999999999999999999 8889999999999999999 88888999999 999999999998 778
Q ss_pred CCccCCCc--cCeeecccccccccCCccc---c--CCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC
Q 015202 155 TTIGGLKD--LQYLFLEYNRLQGSIPDFI---G--GLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 155 ~~~~~~~~--L~~L~l~~n~l~~~~~~~~---~--~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 227 (411)
..+..++. |+.|++++|.+++.+|... . .+++|+.|++++|.++...+..+..+++|+.|++++|.++ .+|.
T Consensus 636 ~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~ 714 (876)
T 4ecn_A 636 NIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPE 714 (876)
T ss_dssp SCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCT
T ss_pred hhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccCh
Confidence 87776654 9999999999987665432 2 3458999999999998544444457889999999999988 4443
Q ss_pred -CCCC--------CCccccccCCCCc
Q 015202 228 -EGPF--------RNFSIESFKGNEL 244 (411)
Q Consensus 228 -~~~~--------~~~~~~~~~~n~~ 244 (411)
.... +.+..+++.+|..
T Consensus 715 ~~~~~~~~~l~nl~~L~~L~Ls~N~L 740 (876)
T 4ecn_A 715 NSLKPKDGNYKNTYLLTTIDLRFNKL 740 (876)
T ss_dssp TSSSCTTSCCTTGGGCCEEECCSSCC
T ss_pred HHhccccccccccCCccEEECCCCCC
Confidence 2221 1677777777743
No 45
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.4e-26 Score=205.11 Aligned_cols=207 Identities=25% Similarity=0.290 Sum_probs=184.0
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
.+.+.+++++++++. +|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++...+..|..+++|+.|++
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 357899999999984 554443 68999999999999877778999999999999999999777777899999999999
Q ss_pred ccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccccccc
Q 015202 98 GSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGS 176 (411)
Q Consensus 98 ~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 176 (411)
++|.++.+|.. +..+++|+.|++++|.++...+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 172 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRV 172 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEe
Confidence 99999988765 46899999999999999987788899999999999999999988777889999999999999999988
Q ss_pred CCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC
Q 015202 177 IPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 177 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 227 (411)
.+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|++.+.++.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 173 PEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred ChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 778899999999999999999987777888999999999999999887753
No 46
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=7.4e-27 Score=229.29 Aligned_cols=86 Identities=19% Similarity=0.177 Sum_probs=54.4
Q ss_pred cCCCccCeeecccccccccCCccccCCCCCCEEeCCCCcccc--ccchhhhcCCCCCEEEcccCcccccCCC--CCCCCC
Q 015202 158 GGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSG--AIPISLEKLLDLQHINVSFNKLEGEIPR--EGPFRN 233 (411)
Q Consensus 158 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~l~l~~n~l~~~~~~--~~~~~~ 233 (411)
..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++ .+|..+..+++|+.|++++|.+++.+|. ...+..
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 455667777777777766666666777777777777777765 3445666677777777777777664442 233455
Q ss_pred ccccccCCCC
Q 015202 234 FSIESFKGNE 243 (411)
Q Consensus 234 ~~~~~~~~n~ 243 (411)
++.+++.+|.
T Consensus 401 L~~L~Ls~N~ 410 (520)
T 2z7x_B 401 LLSLNMSSNI 410 (520)
T ss_dssp CCEEECCSSC
T ss_pred CCEEECcCCC
Confidence 5555555553
No 47
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=227.30 Aligned_cols=158 Identities=23% Similarity=0.216 Sum_probs=78.7
Q ss_pred CCccCCeeecccccCCc-cCccccCCCCCcEEEcCCCeeee--cCCCCccCccCCCeEEccCCeecccCC-CCccCCCcc
Q 015202 88 NLTNLRKLYLGSNQLTY-IPLTLWNLKYILYLNLSSNSFTI--PLPSEIGNLEVLVQIDLSMNNFSGAIP-TTIGGLKDL 163 (411)
Q Consensus 88 ~l~~L~~L~l~~n~l~~-~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~~~~L 163 (411)
.+++|+.|++++|.++. +|..+..+++|+.|++++|.+.+ .+|..+..+++|+.|++++|.+++.+| ..+..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 33444444444444442 34444444555555555554443 223344445555555555555544222 234444555
Q ss_pred CeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC-CCCCCCccccccCCC
Q 015202 164 QYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR-EGPFRNFSIESFKGN 242 (411)
Q Consensus 164 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n 242 (411)
+.|++++|.+++..|..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|.++...+. ...+..+..+++.+|
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCC
Confidence 5555555555444433332 45566666666655 4455555666666666666666633222 234455566666666
Q ss_pred CcccCC
Q 015202 243 ELLCGM 248 (411)
Q Consensus 243 ~~~c~~ 248 (411)
+..|.+
T Consensus 479 ~~~c~c 484 (520)
T 2z7x_B 479 PWDCSC 484 (520)
T ss_dssp CBCCCH
T ss_pred CCcccC
Confidence 665543
No 48
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=3e-28 Score=223.18 Aligned_cols=217 Identities=20% Similarity=0.218 Sum_probs=155.9
Q ss_pred CCCCcc-cccCChhcc-------cCCcCCceeecCcccccccchhh--hCCCCCCeeecccCcccccCchhhhcc-----
Q 015202 1 MFNCNI-SGSIPEEIN-------NLTNLIAIYLGGNKLNGSISIAL--GKLQKLQLLGLEDNQLEGSIPYDLCRL----- 65 (411)
Q Consensus 1 l~~n~~-~~~~p~~~~-------~~~~L~~L~l~~n~~~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~~~~~~l----- 65 (411)
|++|.+ .+.+|+.+. ++++|++|+|++|.+++..|..+ ..+++|++|++++|.+++. |..+..+
T Consensus 70 L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~ 148 (312)
T 1wwl_A 70 LKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLK 148 (312)
T ss_dssp CCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCC
T ss_pred cccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhc
Confidence 356666 456776655 67788888888888877777665 7788888888888887766 6666666
Q ss_pred ccCCeeeecCCcccccCCccccCCccCCeeecccccCCc---cCccc--cCCCCCcEEEcCCCeeee---cCCCCccCcc
Q 015202 66 AALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTY---IPLTL--WNLKYILYLNLSSNSFTI---PLPSEIGNLE 137 (411)
Q Consensus 66 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~p~~~--~~~~~L~~L~l~~n~l~~---~~~~~~~~l~ 137 (411)
++|++|++++|.+.+..+..+..+++|+.|++++|++.. ++..+ ..+++|++|++++|.+++ .....+..++
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~ 228 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV 228 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC
Confidence 778888888888877777778888888888888887653 33344 577788888888887762 1122344667
Q ss_pred CCCeEEccCCeecccCC-CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEc
Q 015202 138 VLVQIDLSMNNFSGAIP-TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINV 216 (411)
Q Consensus 138 ~L~~L~l~~n~~~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l 216 (411)
+|+.|++++|.+++..| ..+..+++|+.|++++|.++ .+|..+. ++|+.|++++|.+++. |. +..+++|+.|++
T Consensus 229 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L 303 (312)
T 1wwl_A 229 QLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSL 303 (312)
T ss_dssp CCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEEC
T ss_pred CCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEec
Confidence 78888888888876654 44556778888888888887 5555554 6788888888888765 44 777788888888
Q ss_pred ccCcccc
Q 015202 217 SFNKLEG 223 (411)
Q Consensus 217 ~~n~l~~ 223 (411)
++|++++
T Consensus 304 ~~N~l~~ 310 (312)
T 1wwl_A 304 KGNPFLD 310 (312)
T ss_dssp TTCTTTC
T ss_pred cCCCCCC
Confidence 8887764
No 49
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=6.9e-27 Score=241.91 Aligned_cols=125 Identities=26% Similarity=0.217 Sum_probs=74.3
Q ss_pred CCCcccccCChhcccCCcCCceeecCccccccc-chhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSI-SIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
++|.|++..|..|.++++|++|+|++|...+.+ |..|.++++|++|+|++|.+.+..|+.|.++++|++|+|++|.+.+
T Consensus 32 s~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~ 111 (844)
T 3j0a_A 32 SFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSD 111 (844)
T ss_dssp ESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSS
T ss_pred CCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCc
Confidence 566666666666666666666666666443333 5566666666666666666666666666666666666666666665
Q ss_pred cCCcc--ccCCccCCeeecccccCCccC--ccccCCCCCcEEEcCCCeee
Q 015202 81 FVPSC--FGNLTNLRKLYLGSNQLTYIP--LTLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 81 ~~~~~--~~~l~~L~~L~l~~n~l~~~p--~~~~~~~~L~~L~l~~n~l~ 126 (411)
..+.. +..+++|+.|++++|.++.++ ..+.++++|++|++++|.+.
T Consensus 112 ~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 112 AVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIF 161 (844)
T ss_dssp CCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCC
T ss_pred ccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCC
Confidence 44333 556666666666666655432 23455555555555555443
No 50
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=1.2e-26 Score=232.02 Aligned_cols=222 Identities=23% Similarity=0.143 Sum_probs=199.9
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccc--cchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGS--ISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~--~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
++|...+.+ .+..+++|++|++++|.+++. .+..+..+++|++|++++|.+++ +|..+..+++|++|++++|.+.
T Consensus 336 ~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~ 412 (606)
T 3vq2_A 336 TMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLK 412 (606)
T ss_dssp ESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEE
T ss_pred cCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccC
Confidence 455555555 567999999999999999876 38889999999999999999985 4578999999999999999999
Q ss_pred ccCC-ccccCCccCCeeecccccCCc-cCccccCCCCCcEEEcCCCeeee-cCCCCccCccCCCeEEccCCeecccCCCC
Q 015202 80 GFVP-SCFGNLTNLRKLYLGSNQLTY-IPLTLWNLKYILYLNLSSNSFTI-PLPSEIGNLEVLVQIDLSMNNFSGAIPTT 156 (411)
Q Consensus 80 ~~~~-~~~~~l~~L~~L~l~~n~l~~-~p~~~~~~~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 156 (411)
+..| ..+..+++|+.|++++|.++. .|..+..+++|++|++++|.+.+ ..|..+..+++|+.|++++|.+++..|..
T Consensus 413 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 492 (606)
T 3vq2_A 413 RVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGV 492 (606)
T ss_dssp STTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTT
T ss_pred CccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhh
Confidence 8877 689999999999999999984 67778899999999999999987 47889999999999999999999999999
Q ss_pred ccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCC-CCCEEEcccCcccccCCC
Q 015202 157 IGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLL-DLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 157 ~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~l~l~~n~l~~~~~~ 227 (411)
+..+++|+.|++++|++++..|..+..+++|+.|++++|.++ .+|..+..++ +|+.+++++|++.|.++.
T Consensus 493 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 493 FDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp TTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred hcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999999999999888999999999999999999999 5666688887 599999999999998874
No 51
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=1.9e-26 Score=228.37 Aligned_cols=158 Identities=24% Similarity=0.254 Sum_probs=81.5
Q ss_pred CCccCCeeecccccCCc-cCccccCCCCCcEEEcCCCeeee--cCCCCccCccCCCeEEccCCeecc-cCCCCccCCCcc
Q 015202 88 NLTNLRKLYLGSNQLTY-IPLTLWNLKYILYLNLSSNSFTI--PLPSEIGNLEVLVQIDLSMNNFSG-AIPTTIGGLKDL 163 (411)
Q Consensus 88 ~l~~L~~L~l~~n~l~~-~p~~~~~~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~~~~-~~~~~~~~~~~L 163 (411)
.+++|+.|++++|.++. +|..+..+++|+.|++++|.+++ ..|..+.++++|+.|++++|.+++ ..+..+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 34455555555555543 34444555555555555555543 122344555555555555555554 222234455555
Q ss_pred CeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC-CCCCCCccccccCCC
Q 015202 164 QYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR-EGPFRNFSIESFKGN 242 (411)
Q Consensus 164 ~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~-~~~~~~~~~~~~~~n 242 (411)
+.|++++|.+++..|..+. ++|+.|++++|.++ .+|..+..+++|+.|++++|.++...+. ...++.+..+++.+|
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSC
T ss_pred CEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCC
Confidence 5555555555444333322 45666666666665 3444444666666666666666643332 334555566666666
Q ss_pred CcccCC
Q 015202 243 ELLCGM 248 (411)
Q Consensus 243 ~~~c~~ 248 (411)
++.|.+
T Consensus 508 ~~~c~c 513 (562)
T 3a79_B 508 PWDCTC 513 (562)
T ss_dssp CBCCCH
T ss_pred CcCCCc
Confidence 666644
No 52
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=2.4e-27 Score=229.95 Aligned_cols=209 Identities=21% Similarity=0.234 Sum_probs=185.0
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|++|++++|.+++
T Consensus 41 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~ 113 (487)
T 3oja_A 41 LSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISR 113 (487)
T ss_dssp CCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCC
T ss_pred eeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCC
Confidence 57899999989999999999999999999997776 8999999999999999986543 3899999999999997
Q ss_pred cCCccccCCccCCeeecccccCCcc-CccccCCCCCcEEEcCCCeeeecCCCCcc-CccCCCeEEccCCeecccCCCCcc
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYI-PLTLWNLKYILYLNLSSNSFTIPLPSEIG-NLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~-p~~~~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
..+. .+++|+.|++++|.++.+ |..+..+++|+.|++++|.+++..|..+. .+++|+.|+|++|.+++..+. .
T Consensus 114 ~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~--~ 188 (487)
T 3oja_A 114 VSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--V 188 (487)
T ss_dssp EEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--C
T ss_pred CCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccccc--c
Confidence 6554 357899999999999976 55778899999999999999988888876 789999999999999977443 3
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
.+++|+.|++++|.+++..|. +..+++|+.|++++|.+++ +|..+..+++|+.+++++|++.+
T Consensus 189 ~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 189 VFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp CCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCH
T ss_pred cCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcC
Confidence 589999999999999976554 8899999999999999995 67778899999999999999984
No 53
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=1.8e-26 Score=229.08 Aligned_cols=243 Identities=23% Similarity=0.210 Sum_probs=193.7
Q ss_pred cccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhh-------------------hcc
Q 015202 5 NISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDL-------------------CRL 65 (411)
Q Consensus 5 ~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-------------------~~l 65 (411)
.+.+.+|..+.++++|+.|++++|.+. .+|..+..+ +|++|++++|.+.......+ ..+
T Consensus 269 ~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~ 346 (570)
T 2z63_A 269 YYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL 346 (570)
T ss_dssp EEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBC
T ss_pred hhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccccC
Confidence 566777888888888888888888877 455556665 66666666666552211111 456
Q ss_pred ccCCeeeecCCcccccC--CccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCC-CCccCccCCCeE
Q 015202 66 AALFQLDLGDNKLSGFV--PSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLP-SEIGNLEVLVQI 142 (411)
Q Consensus 66 ~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L 142 (411)
++|++|++++|.+++.. +..+..+++|+.|++++|.++.++..+..+++|+.|++++|.+.+..+ ..+..+++|+.|
T Consensus 347 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 426 (570)
T 2z63_A 347 PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYL 426 (570)
T ss_dssp TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEE
T ss_pred CCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEE
Confidence 77888888888777543 566778888888888888888887778888999999999998886655 467888999999
Q ss_pred EccCCeecccCCCCccCCCccCeeeccccccc-ccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcc
Q 015202 143 DLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQ-GSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKL 221 (411)
Q Consensus 143 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l 221 (411)
++++|.+.+..|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+
T Consensus 427 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 506 (570)
T 2z63_A 427 DISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQL 506 (570)
T ss_dssp ECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcC
Confidence 99999998888888889999999999999987 46788889999999999999999988888899999999999999999
Q ss_pred cccCCCC-CCCCCccccccCCCCcccCCC
Q 015202 222 EGEIPRE-GPFRNFSIESFKGNELLCGMP 249 (411)
Q Consensus 222 ~~~~~~~-~~~~~~~~~~~~~n~~~c~~~ 249 (411)
++..+.. ..++.+..+++.+|+..|.++
T Consensus 507 ~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 507 KSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 8876653 467788888999999888765
No 54
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.94 E-value=3.5e-26 Score=226.47 Aligned_cols=85 Identities=18% Similarity=0.223 Sum_probs=45.9
Q ss_pred cCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccc--cchhhhcCCCCCEEEcccCcccccCCCC--CCCCC
Q 015202 158 GGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA--IPISLEKLLDLQHINVSFNKLEGEIPRE--GPFRN 233 (411)
Q Consensus 158 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~l~l~~n~l~~~~~~~--~~~~~ 233 (411)
..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++. .|..+..+++|+.|++++|.+++.+|.. ..+..
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 3445566666666666655555566666666666666666542 2344555666666666666665533321 22344
Q ss_pred ccccccCCC
Q 015202 234 FSIESFKGN 242 (411)
Q Consensus 234 ~~~~~~~~n 242 (411)
+..+++.+|
T Consensus 430 L~~L~l~~n 438 (562)
T 3a79_B 430 ILVLNLSSN 438 (562)
T ss_dssp CCEEECCSS
T ss_pred CCEEECCCC
Confidence 444444444
No 55
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=4e-26 Score=205.35 Aligned_cols=201 Identities=20% Similarity=0.204 Sum_probs=182.5
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++..|..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++..+..|.++++|++|++++|.+.+
T Consensus 35 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 114 (276)
T 2z62_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC
T ss_pred CCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccc
Confidence 57899999888899999999999999999998888899999999999999999998888899999999999999999998
Q ss_pred cCCccccCCccCCeeecccccCCc--cCccccCCCCCcEEEcCCCeeeecCCCCccCccCCC----eEEccCCeecccCC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTY--IPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLV----QIDLSMNNFSGAIP 154 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~--~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~l~~n~~~~~~~ 154 (411)
..+..+..+++|+.|++++|.++. +|..+..+++|+.|++++|.+++..+..+..+.+|+ .|++++|.+++..+
T Consensus 115 ~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~ 194 (276)
T 2z62_A 115 LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQP 194 (276)
T ss_dssp STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECT
T ss_pred cCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCc
Confidence 777789999999999999999986 688899999999999999999987777888877777 89999999997777
Q ss_pred CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccc
Q 015202 155 TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIP 202 (411)
Q Consensus 155 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 202 (411)
..+.. .+|+.|++++|.+++..+..+..+++|+.|++++|.+++..+
T Consensus 195 ~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 195 GAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp TSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 66654 589999999999998777778999999999999999986543
No 56
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=1.7e-26 Score=228.27 Aligned_cols=135 Identities=24% Similarity=0.232 Sum_probs=116.1
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|++++|.+++..+..|.++++|++|++++|.+++
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 57899999989999999999999999999998888899999999999999999998887779999999999999999986
Q ss_pred c-CCccccCCccCCeeeccccc-CCccC-ccccCCCCCcEEEcCCCeeeecCCCCccC
Q 015202 81 F-VPSCFGNLTNLRKLYLGSNQ-LTYIP-LTLWNLKYILYLNLSSNSFTIPLPSEIGN 135 (411)
Q Consensus 81 ~-~~~~~~~l~~L~~L~l~~n~-l~~~p-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 135 (411)
. .|..+..+++|+.|++++|. +..+| ..+..+++|++|++++|.+.+..|..+..
T Consensus 113 ~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 113 LGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred cchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 3 56778899999999999998 56776 46778888888888888888777766554
No 57
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.94 E-value=1.4e-25 Score=202.99 Aligned_cols=207 Identities=26% Similarity=0.279 Sum_probs=186.1
Q ss_pred hhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCCCCCc
Q 015202 37 ALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYIL 116 (411)
Q Consensus 37 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~ 116 (411)
.+.++++++++++++|.++. +|..+. +++++|++++|.+++..+..|..+++|+.|++++|.++.++.. ..+++|+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~ 80 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLG 80 (290)
T ss_dssp EEECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCC
T ss_pred cccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCC
Confidence 46789999999999999984 454443 6899999999999988888999999999999999999988765 7899999
Q ss_pred EEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCc
Q 015202 117 YLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNN 196 (411)
Q Consensus 117 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 196 (411)
.|++++|.+. .+|..+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999998 788889999999999999999998888999999999999999999998888888999999999999999
Q ss_pred cccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCcccCC
Q 015202 197 LSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNELLCGM 248 (411)
Q Consensus 197 l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~~c~~ 248 (411)
+++..+..+..+++|+.|++++|.++...+.......+..+++.+||+.|.+
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 9987777788999999999999999966555566677888999999999976
No 58
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.93 E-value=7.4e-26 Score=199.14 Aligned_cols=204 Identities=18% Similarity=0.194 Sum_probs=166.2
Q ss_pred ccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCc-ccccCchhhhccccCCeeeecC-CcccccCCcc
Q 015202 8 GSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-LEGSIPYDLCRLAALFQLDLGD-NKLSGFVPSC 85 (411)
Q Consensus 8 ~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~ 85 (411)
..+|. +. ++|+.|++++|++++..+..|.++++|++|++++|. ++...+..|.++++|++|++++ |.++...+..
T Consensus 24 ~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 24 QRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred cccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 45666 43 478899999999987777788899999999999996 8877777888899999999998 8888777778
Q ss_pred ccCCccCCeeecccccCCccCccccCCCCCc---EEEcCCC-eeeecCCCCccCccCCC-eEEccCCeecccCCCCccCC
Q 015202 86 FGNLTNLRKLYLGSNQLTYIPLTLWNLKYIL---YLNLSSN-SFTIPLPSEIGNLEVLV-QIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~~ 160 (411)
|..+++|+.|++++|.++.+|. +..+++|+ .|++++| .+....+..|.++++|+ .|++++|.++...+..|..
T Consensus 101 f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp EECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred hCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 8889999999999999988886 77778887 8999988 88876677788888998 9999999888555555655
Q ss_pred CccCeeeccccc-ccccCCccccCC-CCCCEEeCCCCccccccchhhhcCCCCCEEEcccC
Q 015202 161 KDLQYLFLEYNR-LQGSIPDFIGGL-INLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFN 219 (411)
Q Consensus 161 ~~L~~L~l~~n~-l~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n 219 (411)
++|+.|++++|. +++..+..|..+ ++|+.|++++|.+++..+. .+++|+.|+++++
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 789999999984 887777788888 8899999999888854443 5677888888765
No 59
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=6.5e-26 Score=203.44 Aligned_cols=204 Identities=25% Similarity=0.302 Sum_probs=132.8
Q ss_pred cccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
+..+++|+.|++++|.++. + ..+..+++|++|++++|.+++. +.+..+++|++|++++|.+++..+..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 3456667777777776652 2 2466677777777777766642 3566667777777777777666555666677777
Q ss_pred eeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccc
Q 015202 94 KLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNR 172 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~ 172 (411)
+|++++|+++.++.. +..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 777777777665544 4566677777777776665555556666777777777777766666666666777777777777
Q ss_pred ccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC
Q 015202 173 LQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE 228 (411)
Q Consensus 173 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 228 (411)
+++..+..+..+++|+.|++++|.+.+. ++.|+.+++..|.++|.+|..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 7666666666667777777777766543 345666666667666666643
No 60
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.1e-25 Score=198.87 Aligned_cols=196 Identities=29% Similarity=0.316 Sum_probs=175.9
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|++++|.++...+..|.++++|++|++++|.+...
T Consensus 24 ~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~ 100 (270)
T 2o6q_A 24 SSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100 (270)
T ss_dssp TTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCC
T ss_pred cCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcC
Confidence 456666 4777664 6899999999999988888999999999999999999977777789999999999999999987
Q ss_pred CCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCC
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
.+..|..+++|+.|++++|.++.++.. +..+++|++|++++|.+....+..|..+++|+.|++++|.+++..+..|..+
T Consensus 101 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 180 (270)
T 2o6q_A 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180 (270)
T ss_dssp CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTC
T ss_pred CHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccC
Confidence 778889999999999999999988754 5789999999999999997666778999999999999999998888889999
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCccccc
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
++|+.|++++|.+++..+..+..+++|+.|++++|.+...
T Consensus 181 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 181 TELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 9999999999999987777889999999999999998744
No 61
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.3e-25 Score=222.88 Aligned_cols=210 Identities=23% Similarity=0.299 Sum_probs=182.8
Q ss_pred cCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccC--chhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSI--PYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
.+++|+.|++++|.+.+..+. ..+++|++|++++|.+++.. +..+..+++|++|++++|.+.+..+. +..+++|+
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~ 399 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLE 399 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCC
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCC
Confidence 344455555555544433332 67899999999999988654 77899999999999999999965544 99999999
Q ss_pred eeecccccCCccCc--cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeec-ccCCCCccCCCccCeeeccc
Q 015202 94 KLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFS-GAIPTTIGGLKDLQYLFLEY 170 (411)
Q Consensus 94 ~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~L~l~~ 170 (411)
.|++++|.++..+. .+..+++|+.|++++|.+.+..|..+.++++|+.|++++|.++ +..|..+..+++|+.|++++
T Consensus 400 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~ 479 (570)
T 2z63_A 400 HLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479 (570)
T ss_dssp EEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTT
T ss_pred EEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCC
Confidence 99999999986643 5778999999999999999889999999999999999999997 57899999999999999999
Q ss_pred ccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCC
Q 015202 171 NRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPRE 228 (411)
Q Consensus 171 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~ 228 (411)
|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.+++++|+++|.+|..
T Consensus 480 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 9999888999999999999999999999988888999999999999999999998864
No 62
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=5.7e-26 Score=208.45 Aligned_cols=209 Identities=21% Similarity=0.212 Sum_probs=181.9
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|.+++..|..|.++++|++|+|++|.+++..+ +..+++|++|++++|.+++.. ..++|++|++++|.+++
T Consensus 41 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~ 113 (317)
T 3o53_A 41 LSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISR 113 (317)
T ss_dssp CTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSE
T ss_pred CcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCC
Confidence 57899999888999999999999999999987665 899999999999999998543 34899999999999997
Q ss_pred cCCccccCCccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCcc-CccCCCeEEccCCeecccCCCCcc
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIG-NLEVLVQIDLSMNNFSGAIPTTIG 158 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~~~~~~~~~~~ 158 (411)
..+.. +++|+.|++++|.++.++. .+..+++|+.|++++|.+.+..+..+. .+++|+.|++++|.+++..+. .
T Consensus 114 ~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~--~ 188 (317)
T 3o53_A 114 VSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ--V 188 (317)
T ss_dssp EEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC--C
T ss_pred cCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcccccc--c
Confidence 65544 5789999999999997754 677899999999999999987777664 789999999999999866333 3
Q ss_pred CCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 159 GLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 159 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
.+++|+.|++++|.+++..+ .+..+++|+.|++++|.++ .+|..+..+++|+.+++++|++.+
T Consensus 189 ~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 189 VFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred ccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 48999999999999996544 5889999999999999999 467788899999999999999984
No 63
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=3.9e-25 Score=205.63 Aligned_cols=229 Identities=25% Similarity=0.348 Sum_probs=129.4
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++ + +.+.++++|++|++++|.+++..+ +.++++|++|++++|.....++ .+..+++|++|++++|.+..
T Consensus 95 L~~n~i~~-~-~~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~ 169 (347)
T 4fmz_A 95 IGTNKITD-I-SALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKD 169 (347)
T ss_dssp CCSSCCCC-C-GGGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCC
T ss_pred ccCCcccC-c-hHHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCC
Confidence 46777776 3 458888899999999888875443 7788888888888885443333 36777777777777777764
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCC------
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIP------ 154 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~------ 154 (411)
..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|.+....+ +..+++|+.|++++|.+++..+
T Consensus 170 ~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~~~~l~~ 244 (347)
T 4fmz_A 170 VTP--IANLTDLYSLSLNYNQIEDISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSPLANLSQ 244 (347)
T ss_dssp CGG--GGGCTTCSEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTT
T ss_pred chh--hccCCCCCEEEccCCccccccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcchhcCCC
Confidence 332 6667777777777777766554 4445555555555555442222 4444455555555554443322
Q ss_pred --------------CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCc
Q 015202 155 --------------TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNK 220 (411)
Q Consensus 155 --------------~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 220 (411)
..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+..+..+++|+.|++++|+
T Consensus 245 L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~ 322 (347)
T 4fmz_A 245 LTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNH 322 (347)
T ss_dssp CCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSS
T ss_pred CCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCc
Confidence 2334444444445444444432 224444455555555555544444444555555555555555
Q ss_pred ccccCCCCCCCCCccccccCCC
Q 015202 221 LEGEIPREGPFRNFSIESFKGN 242 (411)
Q Consensus 221 l~~~~~~~~~~~~~~~~~~~~n 242 (411)
+++..| ...++.+..+++.+|
T Consensus 323 l~~~~~-~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 323 ITDIRP-LASLSKMDSADFANQ 343 (347)
T ss_dssp CCCCGG-GGGCTTCSEESSSCC
T ss_pred cccccC-hhhhhccceeehhhh
Confidence 544333 233444444444444
No 64
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=5.7e-25 Score=197.29 Aligned_cols=206 Identities=24% Similarity=0.278 Sum_probs=183.4
Q ss_pred cCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCee
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKL 95 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 95 (411)
.+.++..+++..+.+.... ....+++|+.|++++|.++.. +.+..+++|++|++++|.+.+. ..+..+++|++|
T Consensus 17 ~~~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 90 (272)
T 3rfs_A 17 AFAETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYL 90 (272)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEE
T ss_pred hHHHHHHHHhcCccccccc--ccccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEE
Confidence 4456778888888876544 467899999999999998843 3588999999999999999863 478899999999
Q ss_pred ecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccccc
Q 015202 96 YLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQ 174 (411)
Q Consensus 96 ~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~ 174 (411)
++++|.++.++.. +..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.++
T Consensus 91 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 170 (272)
T 3rfs_A 91 ILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ 170 (272)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcC
Confidence 9999999988765 578999999999999999777777899999999999999999888888899999999999999999
Q ss_pred ccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCC
Q 015202 175 GSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 175 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~ 227 (411)
+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|++.|.+|.
T Consensus 171 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 171 SLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred ccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCcH
Confidence 88888889999999999999999998888899999999999999999988774
No 65
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=2.1e-24 Score=216.71 Aligned_cols=249 Identities=25% Similarity=0.365 Sum_probs=199.2
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
|++|+|++..|++|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++++|.++.
T Consensus 83 Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~ 162 (635)
T 4g8a_A 83 LSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQS 162 (635)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcccc
Confidence 57889998888889999999999999999988778889999999999999999987777778889999999999998875
Q ss_pred c-CCccccCCccCCeeecccccCCccCcc---------------------------------------------------
Q 015202 81 F-VPSCFGNLTNLRKLYLGSNQLTYIPLT--------------------------------------------------- 108 (411)
Q Consensus 81 ~-~~~~~~~l~~L~~L~l~~n~l~~~p~~--------------------------------------------------- 108 (411)
. .|..+..+++|+.|++++|+++.++..
T Consensus 163 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~ 242 (635)
T 4g8a_A 163 FKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMK 242 (635)
T ss_dssp CCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHH
T ss_pred CCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccc
Confidence 3 466777888888888877765422100
Q ss_pred --------------------------------------------------------------------------------
Q 015202 109 -------------------------------------------------------------------------------- 108 (411)
Q Consensus 109 -------------------------------------------------------------------------------- 108 (411)
T Consensus 243 ~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~ 322 (635)
T 4g8a_A 243 TCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK 322 (635)
T ss_dssp HHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECG
T ss_pred hhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccccccc
Confidence
Q ss_pred --------------------------------------------ccCCCCCcEEEcCCCee-------------------
Q 015202 109 --------------------------------------------LWNLKYILYLNLSSNSF------------------- 125 (411)
Q Consensus 109 --------------------------------------------~~~~~~L~~L~l~~n~l------------------- 125 (411)
...+++|+.|+++.|.+
T Consensus 323 ~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L 402 (635)
T 4g8a_A 323 DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYL 402 (635)
T ss_dssp GGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEE
T ss_pred ccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhh
Confidence 00122334444433322
Q ss_pred -------------------------------------------------------eecCCCCccCccCCCeEEccCCee-
Q 015202 126 -------------------------------------------------------TIPLPSEIGNLEVLVQIDLSMNNF- 149 (411)
Q Consensus 126 -------------------------------------------------------~~~~~~~~~~l~~L~~L~l~~n~~- 149 (411)
.+..+..+..++.|+.|++++|.+
T Consensus 403 ~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~ 482 (635)
T 4g8a_A 403 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 482 (635)
T ss_dssp ECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEG
T ss_pred hccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccc
Confidence 122233344566788999999975
Q ss_pred cccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCC
Q 015202 150 SGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREG 229 (411)
Q Consensus 150 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~ 229 (411)
.+..|..|..+++|+.|+|++|++++..|..|.++++|+.|++++|.+++..+..+..+++|+.|++++|.+++..|...
T Consensus 483 ~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l 562 (635)
T 4g8a_A 483 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 562 (635)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCT
T ss_pred cccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHH
Confidence 44678899999999999999999999999999999999999999999999999999999999999999999999888653
Q ss_pred -CC-CCccccccCCCCcccCCC
Q 015202 230 -PF-RNFSIESFKGNELLCGMP 249 (411)
Q Consensus 230 -~~-~~~~~~~~~~n~~~c~~~ 249 (411)
.+ .+++.+++.+||+.|+|.
T Consensus 563 ~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 563 QHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TCCCTTCCEEECTTCCBCCSGG
T ss_pred HhhhCcCCEEEeeCCCCcccCC
Confidence 33 578899999999999875
No 66
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.92 E-value=1.5e-24 Score=198.10 Aligned_cols=195 Identities=26% Similarity=0.349 Sum_probs=171.2
Q ss_pred cccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
+.++++|+.|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4578899999999999974 44 68899999999999999986544 89999999999999999864 4688999999
Q ss_pred eeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 94 KLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.|++++|.++.++. +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 99999999998875 8899999999999999985433 8899999999999999986544 88999999999999999
Q ss_pred cccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 86544 7889999999999999997653 7899999999999999975
No 67
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.92 E-value=4.1e-25 Score=218.33 Aligned_cols=163 Identities=22% Similarity=0.275 Sum_probs=140.1
Q ss_pred CCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccC
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFV 82 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 82 (411)
+|.++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|++++|.+++..|+.|.++++|++|++++|.+++..
T Consensus 14 ~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 14 SRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp TSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 44444 5777664 79999999999999888899999999999999999999888889999999999999999999877
Q ss_pred CccccCCccCCeeecccccCCc--cCccccCCCCCcEEEcCCCeeeecC-CCCccCccCCCeEEccCCeecccCCCCccC
Q 015202 83 PSCFGNLTNLRKLYLGSNQLTY--IPLTLWNLKYILYLNLSSNSFTIPL-PSEIGNLEVLVQIDLSMNNFSGAIPTTIGG 159 (411)
Q Consensus 83 ~~~~~~l~~L~~L~l~~n~l~~--~p~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 159 (411)
+..|..+++|++|++++|.++. +|..+..+++|++|++++|.+.+.+ +..+.++++|+.|++++|.+++..|..+..
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 7779999999999999999984 4678889999999999999844344 468999999999999999999888887765
Q ss_pred CCccCeeec
Q 015202 160 LKDLQYLFL 168 (411)
Q Consensus 160 ~~~L~~L~l 168 (411)
+++|+.|++
T Consensus 171 l~~L~~L~l 179 (549)
T 2z81_A 171 IRDIHHLTL 179 (549)
T ss_dssp CSEEEEEEE
T ss_pred cccCceEec
Confidence 444433333
No 68
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.92 E-value=2.1e-24 Score=200.64 Aligned_cols=196 Identities=27% Similarity=0.425 Sum_probs=153.9
Q ss_pred cccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
+.++++|+.|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+
T Consensus 151 ~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~ 224 (347)
T 4fmz_A 151 LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLN 224 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCC
Confidence 5555566666666665553332 5666666666666666664322 5666777777777777664433 77888999
Q ss_pred eeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 94 KLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.|++++|.++.++. +..+++|++|++++|.+... ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+
T Consensus 225 ~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l 299 (347)
T 4fmz_A 225 SLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQL 299 (347)
T ss_dssp EEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred EEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcC
Confidence 99999999998876 88899999999999998843 4688899999999999999865 4578899999999999999
Q ss_pred cccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccc
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLE 222 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 222 (411)
++..+..+..+++|+.|++++|.+++..| +..+++|+.+++++|+++
T Consensus 300 ~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 300 GNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 98888889999999999999999997766 889999999999999885
No 69
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.91 E-value=4.8e-24 Score=206.26 Aligned_cols=206 Identities=30% Similarity=0.426 Sum_probs=90.1
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+++..| +.++++|++|++++|.+++..+ +.++++|++|++++|.+++..+ +..+++|++|++++|.+.+.
T Consensus 76 s~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 149 (466)
T 1o6v_A 76 SNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI 149 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC
T ss_pred CCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC
Confidence 4444444322 5555555555555555543333 5555555555555555553322 45555555555555554432
Q ss_pred CC-------------------ccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeE
Q 015202 82 VP-------------------SCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQI 142 (411)
Q Consensus 82 ~~-------------------~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 142 (411)
.+ ..+..+++|+.|++++|.++.++ .+..+++|+.|++++|.+.+..+ ++.+++|+.|
T Consensus 150 ~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 226 (466)
T 1o6v_A 150 SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQISDITP--LGILTNLDEL 226 (466)
T ss_dssp GGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred hhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh-hhccCCCCCEEEecCCccccccc--ccccCCCCEE
Confidence 10 11333444455555555544443 23444555555555554443222 3334444444
Q ss_pred EccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccc
Q 015202 143 DLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLE 222 (411)
Q Consensus 143 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~ 222 (411)
++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.++
T Consensus 227 ~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 300 (466)
T 1o6v_A 227 SLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE 300 (466)
T ss_dssp ECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS
T ss_pred ECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc
Confidence 4444444322 123334444444444444433222 3334444444444444433222 333344444444444333
No 70
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.91 E-value=1.8e-23 Score=200.99 Aligned_cols=201 Identities=24% Similarity=0.232 Sum_probs=145.8
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+++. | .+.++++|++|++++|++++. | +.++++|++|++++|.+++. + +.++++|++|++++|.+++
T Consensus 49 Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~ 120 (457)
T 3bz5_A 49 CHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK 120 (457)
T ss_dssp CCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC
T ss_pred ccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe
Confidence 456777764 5 577777777777777777754 3 67777777777777777754 2 6677777777777777775
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
. + +..+++|+.|++++|+++.++ +..+++|++|++++|...+.+ .+..+++|+.|++++|.+++. | +..+
T Consensus 121 l-~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l 190 (457)
T 3bz5_A 121 L-D--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQN 190 (457)
T ss_dssp C-C--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTC
T ss_pred e-c--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccC
Confidence 3 3 677777777777777777764 566777777777777544344 366777888888888888753 3 6677
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccC
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 225 (411)
++|+.|++++|.+++. .+..+++|+.|++++|.+++ +| +..+++|+.|++++|.+++..
T Consensus 191 ~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 191 KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC
T ss_pred CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC
Confidence 7888888888888754 26777888888888888886 44 667788888888888887654
No 71
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.91 E-value=7.5e-24 Score=204.87 Aligned_cols=227 Identities=30% Similarity=0.410 Sum_probs=150.3
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCc-------------------hh
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIP-------------------YD 61 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-------------------~~ 61 (411)
+++|.+++..| +.++++|++|++++|.+++..+ +.++++|++|++++|.+.+... ..
T Consensus 97 l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~ 172 (466)
T 1o6v_A 97 MNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKP 172 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGG
T ss_pred CCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchh
Confidence 45677776554 7788888888888888775443 7778888888888777664311 12
Q ss_pred hhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCe
Q 015202 62 LCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQ 141 (411)
Q Consensus 62 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 141 (411)
+.++++|++|++++|.+... ..+..+++|+.|++++|.++.++. +..+++|+.|++++|.+... ..+..+++|+.
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 247 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDI--GTLASLTNLTD 247 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSE
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccc--hhhhcCCCCCE
Confidence 55667778888888877643 346777788888888887776654 55677777777777776632 34666777777
Q ss_pred EEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcc
Q 015202 142 IDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKL 221 (411)
Q Consensus 142 L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l 221 (411)
|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 248 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l 321 (466)
T 1o6v_A 248 LDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNI 321 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCC
T ss_pred EECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcC
Confidence 7777777765544 5666777777777777764433 5666677777777777665433 55666677777777766
Q ss_pred cccCCCCCCCCCccccccCCCC
Q 015202 222 EGEIPREGPFRNFSIESFKGNE 243 (411)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~n~ 243 (411)
++..| ...++.++.+++.+|.
T Consensus 322 ~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 322 SDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp SCCGG-GGGCTTCCEEECCSSC
T ss_pred CCchh-hccCccCCEeECCCCc
Confidence 65544 3344555555555553
No 72
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=9.7e-25 Score=199.66 Aligned_cols=221 Identities=18% Similarity=0.163 Sum_probs=117.7
Q ss_pred CCceeecCcccccccc---hhhhCCCCCCeeecccCcccccCchhh--hccccCCeeeecCCcccccCC----ccccCCc
Q 015202 20 LIAIYLGGNKLNGSIS---IALGKLQKLQLLGLEDNQLEGSIPYDL--CRLAALFQLDLGDNKLSGFVP----SCFGNLT 90 (411)
Q Consensus 20 L~~L~l~~n~~~~~~~---~~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~----~~~~~l~ 90 (411)
++.|.+.++.++...- ..+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+.+..+ ..+..++
T Consensus 66 l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~ 145 (310)
T 4glp_A 66 VRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKP 145 (310)
T ss_dssp CCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCS
T ss_pred eeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhcc
Confidence 4555555555432110 012234556666666666665555555 556666666666666654333 2233456
Q ss_pred cCCeeecccccCCccC-ccccCCCCCcEEEcCCCeeeec--C--CCCccCccCCCeEEccCCeecccCC--C-CccCCCc
Q 015202 91 NLRKLYLGSNQLTYIP-LTLWNLKYILYLNLSSNSFTIP--L--PSEIGNLEVLVQIDLSMNNFSGAIP--T-TIGGLKD 162 (411)
Q Consensus 91 ~L~~L~l~~n~l~~~p-~~~~~~~~L~~L~l~~n~l~~~--~--~~~~~~l~~L~~L~l~~n~~~~~~~--~-~~~~~~~ 162 (411)
+|+.|++++|.++.++ ..+..+++|++|++++|.+.+. + +..+..+++|++|++++|.++...+ . .+..+++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~ 225 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQ 225 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCC
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCC
Confidence 6666666666665444 3445566666666666654431 1 2223455666666666666642111 1 2344566
Q ss_pred cCeeecccccccccCCccccCC---CCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCcccccc
Q 015202 163 LQYLFLEYNRLQGSIPDFIGGL---INLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESF 239 (411)
Q Consensus 163 L~~L~l~~n~l~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~ 239 (411)
|+.|++++|.+++..|..+..+ ++|++|++++|.++ .+|..+. ++|+.|++++|.+++. |....++.++.+++
T Consensus 226 L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L 301 (310)
T 4glp_A 226 PHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLTL 301 (310)
T ss_dssp CSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEEC
T ss_pred CCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEEC
Confidence 6666666666665545444444 46666666666666 3344432 5666666666666543 22344555555666
Q ss_pred CCCCc
Q 015202 240 KGNEL 244 (411)
Q Consensus 240 ~~n~~ 244 (411)
.+|+.
T Consensus 302 ~~N~l 306 (310)
T 4glp_A 302 DGNPF 306 (310)
T ss_dssp SSTTT
T ss_pred cCCCC
Confidence 65543
No 73
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=5.3e-24 Score=187.28 Aligned_cols=217 Identities=15% Similarity=0.166 Sum_probs=180.3
Q ss_pred CCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCc-ccccCCccccCCccCCee
Q 015202 17 LTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNK-LSGFVPSCFGNLTNLRKL 95 (411)
Q Consensus 17 ~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L 95 (411)
|...+.+.++.++++ .+|. + .++|++|++++|.+++..+..|.++++|++|++++|. ++...+..|..+++|+.|
T Consensus 10 C~~~~~~~v~c~~l~-~ip~-~--~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 10 CHQEEDFRVTCKDIQ-RIPS-L--PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp EEECSTTEEEECSCS-SCCC-C--CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred eCCCCcceeEccCcc-ccCC-C--CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 433344554444455 4554 3 3489999999999998888889999999999999997 887777789999999999
Q ss_pred eccc-ccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCC---eEEccCC-eecccCCCCccCCCccC-eeec
Q 015202 96 YLGS-NQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLV---QIDLSMN-NFSGAIPTTIGGLKDLQ-YLFL 168 (411)
Q Consensus 96 ~l~~-n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~---~L~l~~n-~~~~~~~~~~~~~~~L~-~L~l 168 (411)
++++ |.++.++. .+..+++|++|++++|.+++ +|. +..+++|+ .|++++| .+++..+..|..+++|+ .|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 9998 99998875 56789999999999999985 665 88888888 9999999 99988888899999999 9999
Q ss_pred ccccccccCCccccCCCCCCEEeCCCCc-cccccchhhhcC-CCCCEEEcccCcccccCCCCCCCCCccccccCCC
Q 015202 169 EYNRLQGSIPDFIGGLINLKSLDLSNNN-LSGAIPISLEKL-LDLQHINVSFNKLEGEIPREGPFRNFSIESFKGN 242 (411)
Q Consensus 169 ~~n~l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l-~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n 242 (411)
++|.++...+..+.. ++|+.|++++|. +++..+..+..+ ++|+.|++++|.+++..+. .+..++.+.+.++
T Consensus 164 ~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 999999555555655 899999999995 987777888899 9999999999999854433 5667776666554
No 74
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3e-23 Score=183.83 Aligned_cols=180 Identities=24% Similarity=0.268 Sum_probs=124.7
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
...+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45667888888777 3444333 57888888888887777777778888888888888887777777777778888888
Q ss_pred ccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccccccc
Q 015202 98 GSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGS 176 (411)
Q Consensus 98 ~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 176 (411)
++|.++.+|.. +..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 88777766643 44667777777777777655555566666777777777766655555666666666666666666655
Q ss_pred CCccccCCCCCCEEeCCCCccccc
Q 015202 177 IPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 177 ~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
.+..+..+++|+.|++++|.+...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHHhCCCCCCEEEeeCCceeCC
Confidence 555666666666666666666543
No 75
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.90 E-value=4.4e-23 Score=198.34 Aligned_cols=216 Identities=21% Similarity=0.259 Sum_probs=187.4
Q ss_pred ccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCcc
Q 015202 6 ISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSC 85 (411)
Q Consensus 6 ~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 85 (411)
..+..|..++++++|++|++++|.+++. | .+..+++|++|++++|.+++. | +..+++|++|++++|.+++. +
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~-- 101 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D-- 101 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--
T ss_pred cCcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--
Confidence 4455666788999999999999999965 4 689999999999999999975 3 88999999999999999975 3
Q ss_pred ccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCe
Q 015202 86 FGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQY 165 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 165 (411)
+..+++|+.|++++|.++.+| +..+++|++|++++|.+++. .++.+++|+.|++++|...+.. .+..+++|+.
T Consensus 102 ~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 174 (457)
T 3bz5_A 102 VTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTT 174 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCCC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCE
T ss_pred cCCCCcCCEEECCCCcCCeec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCE
Confidence 889999999999999999886 88999999999999999863 3888999999999999655454 4778999999
Q ss_pred eecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccccccCCCCc
Q 015202 166 LFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESFKGNEL 244 (411)
Q Consensus 166 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~~ 244 (411)
|++++|.+++ +| +..+++|+.|++++|.+++. .+..+++|+.|++++|.+++ +| ...++.+..+++.+|..
T Consensus 175 L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l 245 (457)
T 3bz5_A 175 LDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPL 245 (457)
T ss_dssp EECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCC
T ss_pred EECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcC
Confidence 9999999996 44 78899999999999999975 37889999999999999998 45 55677788888777753
No 76
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4e-23 Score=183.00 Aligned_cols=182 Identities=25% Similarity=0.249 Sum_probs=159.8
Q ss_pred CCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEc
Q 015202 42 QKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNL 120 (411)
Q Consensus 42 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l 120 (411)
...++++++++.++ .+|..+. +++++|+|++|.+.+..+..|..+++|+.|++++|.++.++.. +..+++|++|++
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45688999999988 4554443 5899999999999988888899999999999999999977654 678999999999
Q ss_pred CCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccc
Q 015202 121 SSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 121 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
++|.++...+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999977778889999999999999999988888888999999999999999977777899999999999999999988
Q ss_pred cchhhhcCCCCCEEEcccCcccccCC
Q 015202 201 IPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 201 ~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
.+..+..+++|+.|++++|++.+...
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 88889999999999999999988743
No 77
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=8.2e-24 Score=193.49 Aligned_cols=202 Identities=18% Similarity=0.174 Sum_probs=172.0
Q ss_pred cCCcCCceeecCcccccccchhh--hCCCCCCeeecccCcccccCc----hhhhccccCCeeeecCCcccccCCccccCC
Q 015202 16 NLTNLIAIYLGGNKLNGSISIAL--GKLQKLQLLGLEDNQLEGSIP----YDLCRLAALFQLDLGDNKLSGFVPSCFGNL 89 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~--~~l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 89 (411)
.+++|++|++++|.+++..|..+ .++++|++|+|++|.+++..+ ..+..+++|++|++++|.+.+..+..+..+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 45779999999999999998888 899999999999999987544 345679999999999999998888999999
Q ss_pred ccCCeeecccccCCc---cCc--cccCCCCCcEEEcCCCeeeecCCC----CccCccCCCeEEccCCeecccCCCCccCC
Q 015202 90 TNLRKLYLGSNQLTY---IPL--TLWNLKYILYLNLSSNSFTIPLPS----EIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 90 ~~L~~L~l~~n~l~~---~p~--~~~~~~~L~~L~l~~n~l~~~~~~----~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
++|+.|++++|++.. ++. .+..+++|++|++++|.++ .++. .+..+++|++|++++|.+++..|..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999999863 432 3358899999999999987 2332 25678999999999999998878777776
Q ss_pred ---CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 161 ---KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 161 ---~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
++|+.|++++|.++ .+|..+. ++|+.|++++|.+++. |. +..+++|+.|++++|+++.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 5666653 7999999999999965 33 6788999999999999864
No 78
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=5.3e-25 Score=207.75 Aligned_cols=236 Identities=19% Similarity=0.253 Sum_probs=181.4
Q ss_pred cCChhcccCCcCCceeecCcccccccc----hhhhCCCCCCeeecccC---cccccCchhh-------hccccCCeeeec
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSIS----IALGKLQKLQLLGLEDN---QLEGSIPYDL-------CRLAALFQLDLG 74 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~----~~~~~l~~L~~L~l~~n---~l~~~~~~~~-------~~l~~L~~L~l~ 74 (411)
.++..+..+++|+.|+|++|.++...+ ..+.++++|++|+|++| .+++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 466778888999999999999886544 34678999999999986 4455556554 678999999999
Q ss_pred CCcccc----cCCccccCCccCCeeecccccCCc-----cCccccCC---------CCCcEEEcCCCeee-ecCC---CC
Q 015202 75 DNKLSG----FVPSCFGNLTNLRKLYLGSNQLTY-----IPLTLWNL---------KYILYLNLSSNSFT-IPLP---SE 132 (411)
Q Consensus 75 ~n~l~~----~~~~~~~~l~~L~~L~l~~n~l~~-----~p~~~~~~---------~~L~~L~l~~n~l~-~~~~---~~ 132 (411)
+|.+.. .+|..+..+++|+.|++++|.++. ++..+..+ ++|++|++++|.+. ..++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999886 466778888999999999998862 33334444 89999999999886 3333 45
Q ss_pred ccCccCCCeEEccCCeecc-----cCCCCccCCCccCeeeccccccc----ccCCccccCCCCCCEEeCCCCccccc---
Q 015202 133 IGNLEVLVQIDLSMNNFSG-----AIPTTIGGLKDLQYLFLEYNRLQ----GSIPDFIGGLINLKSLDLSNNNLSGA--- 200 (411)
Q Consensus 133 ~~~l~~L~~L~l~~n~~~~-----~~~~~~~~~~~L~~L~l~~n~l~----~~~~~~~~~~~~L~~L~l~~n~l~~~--- 200 (411)
+..+++|+.|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..+++|+.|++++|.+++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 6678899999999998872 34447788899999999999986 45677788889999999999998865
Q ss_pred -cchhhhc--CCCCCEEEcccCcccc----cCCCC--CCCCCccccccCCCCc
Q 015202 201 -IPISLEK--LLDLQHINVSFNKLEG----EIPRE--GPFRNFSIESFKGNEL 244 (411)
Q Consensus 201 -~~~~~~~--l~~L~~l~l~~n~l~~----~~~~~--~~~~~~~~~~~~~n~~ 244 (411)
++..+.. +++|+.|++++|.+++ .+|.. ..++.+..+++.+|+.
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 4555543 8899999999999887 24432 2256777888887754
No 79
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.6e-24 Score=202.59 Aligned_cols=243 Identities=19% Similarity=0.159 Sum_probs=190.5
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccc----hhhhCCC-CCCeeecccCcccccCchhhhcc-----ccCCe
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSIS----IALGKLQ-KLQLLGLEDNQLEGSIPYDLCRL-----AALFQ 70 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~----~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~ 70 (411)
++.|.++|.+|..+...++|+.|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|++
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 57899999999987777789999999999997777 7888999 99999999999998878777775 99999
Q ss_pred eeecCCcccccCCcccc----CC-ccCCeeecccccCCccCcc-----ccC-CCCCcEEEcCCCeeeecC----CCCccC
Q 015202 71 LDLGDNKLSGFVPSCFG----NL-TNLRKLYLGSNQLTYIPLT-----LWN-LKYILYLNLSSNSFTIPL----PSEIGN 135 (411)
Q Consensus 71 L~l~~n~l~~~~~~~~~----~l-~~L~~L~l~~n~l~~~p~~-----~~~-~~~L~~L~l~~n~l~~~~----~~~~~~ 135 (411)
|+|++|.+++..+..+. .+ ++|+.|++++|.++..+.. +.. .++|++|++++|.+.... +..+..
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~ 164 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAA 164 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHT
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhc
Confidence 99999999976666444 34 8999999999999866542 333 369999999999988433 333455
Q ss_pred cc-CCCeEEccCCeecccCCCCc----cCC-CccCeeeccccccccc----CCccccC-CCCCCEEeCCCCccccccc--
Q 015202 136 LE-VLVQIDLSMNNFSGAIPTTI----GGL-KDLQYLFLEYNRLQGS----IPDFIGG-LINLKSLDLSNNNLSGAIP-- 202 (411)
Q Consensus 136 l~-~L~~L~l~~n~~~~~~~~~~----~~~-~~L~~L~l~~n~l~~~----~~~~~~~-~~~L~~L~l~~n~l~~~~~-- 202 (411)
++ +|+.|++++|.+++..+..+ ..+ ++|+.|++++|.+++. ++..+.. .++|+.|++++|.+++..+
T Consensus 165 ~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~ 244 (362)
T 3goz_A 165 IPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLEN 244 (362)
T ss_dssp SCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHH
T ss_pred CCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHH
Confidence 55 99999999999987766444 344 5999999999999863 3444444 4699999999999987654
Q ss_pred --hhhhcCCCCCEEEcccCcccccCC--------CCCCCCCccccccCCCC
Q 015202 203 --ISLEKLLDLQHINVSFNKLEGEIP--------REGPFRNFSIESFKGNE 243 (411)
Q Consensus 203 --~~~~~l~~L~~l~l~~n~l~~~~~--------~~~~~~~~~~~~~~~n~ 243 (411)
..+..+++|+.|++++|.+....+ .......+..+++.+|.
T Consensus 245 l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~ 295 (362)
T 3goz_A 245 LKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKE 295 (362)
T ss_dssp HHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCB
T ss_pred HHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCc
Confidence 334667899999999998543221 22345566777777775
No 80
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.2e-22 Score=185.27 Aligned_cols=184 Identities=26% Similarity=0.402 Sum_probs=161.5
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.+.. +| .+..+++|+.|++++|.+++..+ +.++++|++|++++|.+++. +.+..+++|++|++++|.+++
T Consensus 48 l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~ 121 (308)
T 1h6u_A 48 AFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD 121 (308)
T ss_dssp CTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC
Confidence 45677765 45 58999999999999999986555 99999999999999999864 368999999999999999986
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
. + .+..+++|+.|++++|.++.++. +..+++|+.|++++|.+++. +. +..+++|+.|++++|.+++..+ +..+
T Consensus 122 ~-~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l 194 (308)
T 1h6u_A 122 V-T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKISDISP--LASL 194 (308)
T ss_dssp C-G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred c-h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccCcChh--hcCC
Confidence 4 3 38999999999999999998876 88999999999999999854 33 8899999999999999986654 7889
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCcccc
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSG 199 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 199 (411)
++|+.|++++|.+++..+ +..+++|+.|++++|.+++
T Consensus 195 ~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 195 PNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 999999999999996553 7899999999999999985
No 81
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.89 E-value=7.1e-23 Score=196.68 Aligned_cols=221 Identities=24% Similarity=0.295 Sum_probs=122.7
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCC-------------CeeecccCcccccCchhhhcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKL-------------QLLGLEDNQLEGSIPYDLCRLAA 67 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L-------------~~L~l~~n~l~~~~~~~~~~l~~ 67 (411)
+++|.+ |.+|+.++++++|++|++++|.+.+..|..++++++| ++|++++|.+++. |.. .++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~~---~~~ 92 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PEL---PPH 92 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CSC---CTT
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CCC---cCC
Confidence 467888 8999999999999999999999988888888777654 7777777776642 221 245
Q ss_pred CCeeeecCCcccccCCcccc----------------CC-ccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCC
Q 015202 68 LFQLDLGDNKLSGFVPSCFG----------------NL-TNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLP 130 (411)
Q Consensus 68 L~~L~l~~n~l~~~~~~~~~----------------~l-~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~ 130 (411)
|++|++++|.+++ +|..+. .+ ++|++|++++|.++.+| .+..+++|++|++++|.+++ +|
T Consensus 93 L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~-lp 169 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP-ELQNSSFLKIIDVDNNSLKK-LP 169 (454)
T ss_dssp CSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSC-CC
T ss_pred CCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCCc-ccCCCCCCCEEECCCCcCcc-cC
Confidence 6666666666654 333210 11 35555566655555555 35556666666666665553 33
Q ss_pred CCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCC
Q 015202 131 SEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLD 210 (411)
Q Consensus 131 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 210 (411)
..+ .+|++|++++|.+++ +| .+..+++|+.|++++|.+++ +|.. .++|+.|++++|.++ .+| .+..+++
T Consensus 170 ~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~ 238 (454)
T 1jl5_A 170 DLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP-ELQNLPF 238 (454)
T ss_dssp CCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC-CCTTCTT
T ss_pred CCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc-ccCCCCC
Confidence 322 356666666666654 33 35666666666666666663 3322 246667777777666 444 3667777
Q ss_pred CCEEEcccCcccccCCCCCCCCCccccccCCCC
Q 015202 211 LQHINVSFNKLEGEIPREGPFRNFSIESFKGNE 243 (411)
Q Consensus 211 L~~l~l~~n~l~~~~~~~~~~~~~~~~~~~~n~ 243 (411)
|+.|++++|.+++. |. ....++.+++.+|.
T Consensus 239 L~~L~l~~N~l~~l-~~--~~~~L~~L~l~~N~ 268 (454)
T 1jl5_A 239 LTTIYADNNLLKTL-PD--LPPSLEALNVRDNY 268 (454)
T ss_dssp CCEEECCSSCCSSC-CS--CCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCcc-cc--cccccCEEECCCCc
Confidence 77888877777652 22 12455555555553
No 82
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=4.5e-24 Score=197.55 Aligned_cols=208 Identities=20% Similarity=0.176 Sum_probs=137.1
Q ss_pred ChhcccC--CcCCceeecCcccccccchhhhCCCCCCeeecccCccccc-CchhhhccccCCeeeecCCcccccCCcccc
Q 015202 11 PEEINNL--TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGS-IPYDLCRLAALFQLDLGDNKLSGFVPSCFG 87 (411)
Q Consensus 11 p~~~~~~--~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 87 (411)
|..+..+ ++++.|++++|.+.+..+. +.++++|++|++++|.+++. ++..+..+++|++|++++|.+++..+..+.
T Consensus 61 ~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~ 139 (336)
T 2ast_B 61 PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLA 139 (336)
T ss_dssp HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHT
T ss_pred HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHh
Confidence 3445555 6777777777777655544 44677777777777776654 566667777777777777777666666677
Q ss_pred CCccCCeeecccc-cCC--ccCccccCCCCCcEEEcCCC-eeeec-CCCCccCcc-CCCeEEccCC--eec-ccCCCCcc
Q 015202 88 NLTNLRKLYLGSN-QLT--YIPLTLWNLKYILYLNLSSN-SFTIP-LPSEIGNLE-VLVQIDLSMN--NFS-GAIPTTIG 158 (411)
Q Consensus 88 ~l~~L~~L~l~~n-~l~--~~p~~~~~~~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~l~~n--~~~-~~~~~~~~ 158 (411)
.+++|+.|++++| .++ .++..+..+++|++|++++| .+++. ++..+..++ +|+.|++++| .++ +.++..+.
T Consensus 140 ~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~ 219 (336)
T 2ast_B 140 KNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 219 (336)
T ss_dssp TCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH
T ss_pred cCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh
Confidence 7777777777777 566 35555666777777777777 66643 455566677 7777777777 343 23445556
Q ss_pred CCCccCeeeccccc-ccccCCccccCCCCCCEEeCCCCc-cccccchhhhcCCCCCEEEcccC
Q 015202 159 GLKDLQYLFLEYNR-LQGSIPDFIGGLINLKSLDLSNNN-LSGAIPISLEKLLDLQHINVSFN 219 (411)
Q Consensus 159 ~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~l~l~~n 219 (411)
.+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 220 ~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 220 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 67777777777777 555555566777777777777774 22222224666777777777776
No 83
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=3e-24 Score=202.61 Aligned_cols=225 Identities=22% Similarity=0.242 Sum_probs=179.5
Q ss_pred CCCCcccccCCh----hcccCCcCCceeecCc---ccccccchhh-------hCCCCCCeeecccCcccc----cCchhh
Q 015202 1 MFNCNISGSIPE----EINNLTNLIAIYLGGN---KLNGSISIAL-------GKLQKLQLLGLEDNQLEG----SIPYDL 62 (411)
Q Consensus 1 l~~n~~~~~~p~----~~~~~~~L~~L~l~~n---~~~~~~~~~~-------~~l~~L~~L~l~~n~l~~----~~~~~~ 62 (411)
|++|.+++..+. .+.++++|+.|+|++| ++++.+|..+ .++++|++|+|++|.+++ .++..+
T Consensus 39 L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l 118 (386)
T 2ca6_A 39 LSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFL 118 (386)
T ss_dssp CTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHH
Confidence 577888887554 4678999999999986 4445555554 789999999999999987 467788
Q ss_pred hccccCCeeeecCCcccccCCccc----cCC---------ccCCeeecccccCC--ccC---ccccCCCCCcEEEcCCCe
Q 015202 63 CRLAALFQLDLGDNKLSGFVPSCF----GNL---------TNLRKLYLGSNQLT--YIP---LTLWNLKYILYLNLSSNS 124 (411)
Q Consensus 63 ~~l~~L~~L~l~~n~l~~~~~~~~----~~l---------~~L~~L~l~~n~l~--~~p---~~~~~~~~L~~L~l~~n~ 124 (411)
..+++|++|+|++|.++...+..+ ..+ ++|+.|++++|+++ .++ ..+..+++|+.|++++|.
T Consensus 119 ~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 198 (386)
T 2ca6_A 119 SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNG 198 (386)
T ss_dssp HHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSC
T ss_pred HhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCC
Confidence 889999999999999875433333 334 89999999999997 444 456678899999999998
Q ss_pred eee-----cCCCCccCccCCCeEEccCCeec----ccCCCCccCCCccCeeeccccccccc----CCcccc--CCCCCCE
Q 015202 125 FTI-----PLPSEIGNLEVLVQIDLSMNNFS----GAIPTTIGGLKDLQYLFLEYNRLQGS----IPDFIG--GLINLKS 189 (411)
Q Consensus 125 l~~-----~~~~~~~~l~~L~~L~l~~n~~~----~~~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~--~~~~L~~ 189 (411)
+.. ..+..+..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|.+++. ++..+. .+++|+.
T Consensus 199 l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~ 278 (386)
T 2ca6_A 199 IRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQT 278 (386)
T ss_dssp CCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCE
T ss_pred CCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEE
Confidence 872 34447888999999999999996 56677888899999999999998864 455553 3889999
Q ss_pred EeCCCCcccc----ccchhh-hcCCCCCEEEcccCcccccC
Q 015202 190 LDLSNNNLSG----AIPISL-EKLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 190 L~l~~n~l~~----~~~~~~-~~l~~L~~l~l~~n~l~~~~ 225 (411)
|++++|.+++ .+|..+ ..+++|+.|++++|.+++..
T Consensus 279 L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 279 LRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp EECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred EECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 9999999987 477766 56899999999999987543
No 84
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=2e-21 Score=192.43 Aligned_cols=108 Identities=23% Similarity=0.381 Sum_probs=65.4
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.++ .+|..+. ++|+.|+|++|+++. +|. .+++|++|+|++|.+++ +|. .+++|++|++++|.+++
T Consensus 47 ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 115 (622)
T 3g06_A 47 VGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH 115 (622)
T ss_dssp CCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC
T ss_pred ecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC
Confidence 4566776 6777664 678888888888773 333 56778888888887774 333 56677777777777764
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeee
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~ 126 (411)
. |. .+++|+.|++++|+++.+|.. +++|++|++++|.++
T Consensus 116 l-~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 116 L-PA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp C-CC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS
T ss_pred C-CC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcCCcCC
Confidence 3 33 334555555555555555432 244444444444444
No 85
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.4e-23 Score=192.61 Aligned_cols=223 Identities=21% Similarity=0.202 Sum_probs=172.3
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccc-cchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCC-cc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGS-ISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDN-KL 78 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l 78 (411)
+++|.+.+..|. +.++++|+.|+|++|.+++. ++..+..+++|++|++++|.+++..+..+..+++|++|++++| .+
T Consensus 77 l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l 155 (336)
T 2ast_B 77 CPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 155 (336)
T ss_dssp CTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSC
T ss_pred cCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCC
Confidence 467888887776 55789999999999998765 7778889999999999999888778888888999999999998 56
Q ss_pred ccc-CCccccCCccCCeeecccc-cCCc--cCccccCCC-CCcEEEcCCC--eee-ecCCCCccCccCCCeEEccCCe-e
Q 015202 79 SGF-VPSCFGNLTNLRKLYLGSN-QLTY--IPLTLWNLK-YILYLNLSSN--SFT-IPLPSEIGNLEVLVQIDLSMNN-F 149 (411)
Q Consensus 79 ~~~-~~~~~~~l~~L~~L~l~~n-~l~~--~p~~~~~~~-~L~~L~l~~n--~l~-~~~~~~~~~l~~L~~L~l~~n~-~ 149 (411)
++. ++..+..+++|+.|++++| .++. ++..+..++ +|++|++++| .++ ..++..+..+++|+.|++++|. +
T Consensus 156 ~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l 235 (336)
T 2ast_B 156 SEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVML 235 (336)
T ss_dssp CHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTC
T ss_pred CHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcC
Confidence 652 5666778899999999999 8873 666777888 9999999998 444 3456667788899999999998 7
Q ss_pred cccCCCCccCCCccCeeeccccc-ccccCCccccCCCCCCEEeCCCCccccccchhhhcC-CCCCEEEcccCcccccCCC
Q 015202 150 SGAIPTTIGGLKDLQYLFLEYNR-LQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKL-LDLQHINVSFNKLEGEIPR 227 (411)
Q Consensus 150 ~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~l~l~~n~l~~~~~~ 227 (411)
++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| ++.. .+..+ ..+..|++++|.+++..|.
T Consensus 236 ~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 236 KNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp CGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred CHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCC
Confidence 76777788888999999999985 33222235778899999999988 4432 22222 2355666888888877765
Q ss_pred C
Q 015202 228 E 228 (411)
Q Consensus 228 ~ 228 (411)
.
T Consensus 312 ~ 312 (336)
T 2ast_B 312 T 312 (336)
T ss_dssp S
T ss_pred c
Confidence 4
No 86
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.2e-23 Score=196.63 Aligned_cols=224 Identities=20% Similarity=0.201 Sum_probs=178.2
Q ss_pred CCCCcccccCC----hhcccCC-cCCceeecCcccccccchhhhCC-----CCCCeeecccCcccccCchhhhc----c-
Q 015202 1 MFNCNISGSIP----EEINNLT-NLIAIYLGGNKLNGSISIALGKL-----QKLQLLGLEDNQLEGSIPYDLCR----L- 65 (411)
Q Consensus 1 l~~n~~~~~~p----~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~----l- 65 (411)
|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+.. +
T Consensus 29 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 108 (362)
T 3goz_A 29 LSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCC
Confidence 57899998888 7788898 99999999999998877777775 99999999999999877765544 4
Q ss_pred ccCCeeeecCCcccccCCcccc----C-CccCCeeecccccCC-----ccCccccCCC-CCcEEEcCCCeeeecCCCCcc
Q 015202 66 AALFQLDLGDNKLSGFVPSCFG----N-LTNLRKLYLGSNQLT-----YIPLTLWNLK-YILYLNLSSNSFTIPLPSEIG 134 (411)
Q Consensus 66 ~~L~~L~l~~n~l~~~~~~~~~----~-l~~L~~L~l~~n~l~-----~~p~~~~~~~-~L~~L~l~~n~l~~~~~~~~~ 134 (411)
++|++|++++|.++...+..+. . .++|+.|++++|.++ .++..+..++ +|++|++++|.++...+..+.
T Consensus 109 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 188 (362)
T 3goz_A 109 FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELA 188 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHH
Confidence 8999999999999876555443 3 269999999999998 4455556665 999999999999866554443
Q ss_pred ----Cc-cCCCeEEccCCeeccc----CCCCccC-CCccCeeecccccccccCC----ccccCCCCCCEEeCCCCccccc
Q 015202 135 ----NL-EVLVQIDLSMNNFSGA----IPTTIGG-LKDLQYLFLEYNRLQGSIP----DFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 135 ----~l-~~L~~L~l~~n~~~~~----~~~~~~~-~~~L~~L~l~~n~l~~~~~----~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
.. ++|+.|++++|.+++. ++..+.. .++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.
T Consensus 189 ~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i 268 (362)
T 3goz_A 189 KFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNM 268 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTC
T ss_pred HHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcccc
Confidence 44 5999999999999863 3444444 4599999999999986443 3457789999999999995543
Q ss_pred c-------chhhhcCCCCCEEEcccCccccc
Q 015202 201 I-------PISLEKLLDLQHINVSFNKLEGE 224 (411)
Q Consensus 201 ~-------~~~~~~l~~L~~l~l~~n~l~~~ 224 (411)
. +..+..+++|+.+++++|.+...
T Consensus 269 ~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 269 SKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred CHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 3 33556778899999999998755
No 87
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.87 E-value=7e-21 Score=182.81 Aligned_cols=120 Identities=24% Similarity=0.324 Sum_probs=59.1
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeec
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYL 97 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 97 (411)
++|++|++++|.+++ +| .|.++++|++|++++|.+++ +|.. ..+|++|++++|.+++ +| .+..+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 355555555555554 33 35555555555555555553 2322 1355555555555553 23 3555555555555
Q ss_pred ccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeec
Q 015202 98 GSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFS 150 (411)
Q Consensus 98 ~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~ 150 (411)
++|.++.+|... ++|+.|++++|.+. .+| .++.+++|+.|++++|.++
T Consensus 203 ~~N~l~~l~~~~---~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~ 250 (454)
T 1jl5_A 203 DNNSLKKLPDLP---LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLK 250 (454)
T ss_dssp CSSCCSSCCCCC---TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCS
T ss_pred CCCcCCcCCCCc---CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCC
Confidence 555555444321 34455555555444 333 2444444555555554444
No 88
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=3.9e-21 Score=190.39 Aligned_cols=199 Identities=26% Similarity=0.279 Sum_probs=111.9
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.|+ .+|. .+++|++|+|++|++++ +|. .+++|++|++++|.+++. |. .+++|++|++++|.++.
T Consensus 68 L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~ 135 (622)
T 3g06_A 68 IPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS 135 (622)
T ss_dssp ECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC
T ss_pred ecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc
Confidence 3567776 4565 46778888888888774 333 667777777777777643 22 34555555555555553
Q ss_pred cCCccccCCccCCeeecccccCCccCcccc-----------------CCCCCcEEEcCCCeeeecCCCCcc---------
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLW-----------------NLKYILYLNLSSNSFTIPLPSEIG--------- 134 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~-----------------~~~~L~~L~l~~n~l~~~~~~~~~--------- 134 (411)
+|.. +++|+.|++++|.++.+|..+. .+++|+.|++++|.+++ +|..+.
T Consensus 136 -lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~ 210 (622)
T 3g06_A 136 -LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLAS-LPTLPSELYKLWAYN 210 (622)
T ss_dssp -CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSC-CCCCCTTCCEEECCS
T ss_pred -CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCC-CCCccchhhEEECcC
Confidence 2322 2455555555555544433211 12556666666666552 222111
Q ss_pred --------CccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhh
Q 015202 135 --------NLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLE 206 (411)
Q Consensus 135 --------~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 206 (411)
.+++|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|+.|++++|.++ .+|..+.
T Consensus 211 N~l~~l~~~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~ 281 (622)
T 3g06_A 211 NRLTSLPALPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLI 281 (622)
T ss_dssp SCCSSCCCCCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGG
T ss_pred CcccccCCCCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHh
Confidence 11445556666665553 23 23456666666666665 2333 3456666777776666 4566666
Q ss_pred cCCCCCEEEcccCcccccC
Q 015202 207 KLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 207 ~l~~L~~l~l~~n~l~~~~ 225 (411)
.+++|+.|++++|++++..
T Consensus 282 ~l~~L~~L~L~~N~l~~~~ 300 (622)
T 3g06_A 282 HLSSETTVNLEGNPLSERT 300 (622)
T ss_dssp GSCTTCEEECCSCCCCHHH
T ss_pred hccccCEEEecCCCCCCcC
Confidence 6677777777777666543
No 89
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.3e-21 Score=168.10 Aligned_cols=179 Identities=24% Similarity=0.241 Sum_probs=119.0
Q ss_pred CceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccc
Q 015202 21 IAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSN 100 (411)
Q Consensus 21 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 100 (411)
+.++.+++.++. +|.. -.++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~-~p~~--~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTG--IPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSC--CCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCC--CCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 455666666653 3322 2346777777777777555555667777777777777777555555667777777777777
Q ss_pred cCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCc
Q 015202 101 QLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPD 179 (411)
Q Consensus 101 ~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 179 (411)
.++.+|.. +..+++|++|++++|.+.+..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 77766654 3567777777777777775555556777777777777777776666666777777777777776542
Q ss_pred cccCCCCCCEEeCCCCccccccchhhhcCC
Q 015202 180 FIGGLINLKSLDLSNNNLSGAIPISLEKLL 209 (411)
Q Consensus 180 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~ 209 (411)
.+++|+.|++..|.++|.+|..++.++
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ---CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 345667777777777777776666554
No 90
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.4e-21 Score=180.16 Aligned_cols=236 Identities=18% Similarity=0.170 Sum_probs=181.0
Q ss_pred CCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCc-hhhhccccCCe-eeecCCcccc
Q 015202 3 NCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIP-YDLCRLAALFQ-LDLGDNKLSG 80 (411)
Q Consensus 3 ~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~-L~l~~n~l~~ 80 (411)
+++++ .+|..+. +++++|+|++|+|+.+.+.+|.++++|++|+|++|.+.+.+| ..|.+++++++ +.+..|++..
T Consensus 18 ~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~ 94 (350)
T 4ay9_X 18 ESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLY 94 (350)
T ss_dssp STTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCE
T ss_pred CCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccc
Confidence 34454 6787663 689999999999997777789999999999999999865554 56888988776 5677799998
Q ss_pred cCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCC-CeeeecCCCCccCcc-CCCeEEccCCeecccCCCCc
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSS-NSFTIPLPSEIGNLE-VLVQIDLSMNNFSGAIPTTI 157 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~ 157 (411)
..|..|..+++|+.|++++|+++.+|.. +.....+..|++.+ +.+....+..|..+. .++.|++++|.++.+.+..|
T Consensus 95 l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f 174 (350)
T 4ay9_X 95 INPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF 174 (350)
T ss_dssp ECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS
T ss_pred cCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhc
Confidence 8889999999999999999999988754 34667788888855 567655666677764 68899999999986666655
Q ss_pred cCCCccCeeeccc-ccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCccc
Q 015202 158 GGLKDLQYLFLEY-NRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSI 236 (411)
Q Consensus 158 ~~~~~L~~L~l~~-n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~ 236 (411)
...+|+.+++.+ |.++.+.+..|..+++|+.|++++|.++...+.. +.+|+.|.+.++.--...|....+..+..
T Consensus 175 -~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP~l~~l~~L~~ 250 (350)
T 4ay9_X 175 -NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLPTLEKLVALME 250 (350)
T ss_dssp -TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCCCTTTCCSCCE
T ss_pred -cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCCCchhCcChhh
Confidence 457899999975 6677565678899999999999999999655544 45677777666554456666666667766
Q ss_pred cccCCCCccc
Q 015202 237 ESFKGNELLC 246 (411)
Q Consensus 237 ~~~~~n~~~c 246 (411)
.++. ++..|
T Consensus 251 l~l~-~~~~c 259 (350)
T 4ay9_X 251 ASLT-YPSHC 259 (350)
T ss_dssp EECS-CHHHH
T ss_pred CcCC-CCccc
Confidence 6654 33444
No 91
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.86 E-value=5.8e-22 Score=179.26 Aligned_cols=193 Identities=24% Similarity=0.336 Sum_probs=158.3
Q ss_pred cCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCee
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKL 95 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 95 (411)
++.++..+.+..+.+++..+ +..+++|++|++++|.+... + .+..+++|++|++++|.+++..+ +..+++|+.|
T Consensus 22 ~l~~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 22 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEE
Confidence 34455666777777765443 45788999999999988754 3 47888999999999999986544 8889999999
Q ss_pred ecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccc
Q 015202 96 YLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQG 175 (411)
Q Consensus 96 ~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~ 175 (411)
++++|.++.++. +..+++|+.|++++|.+... ..+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++
T Consensus 96 ~l~~n~l~~~~~-l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 96 FLDENKVKDLSS-LKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp ECCSSCCCCGGG-GTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred ECCCCcCCCChh-hccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 999999988764 88899999999999988843 4688889999999999999865 567889999999999999986
Q ss_pred cCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 176 SIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 176 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
..+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|+++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 555 88899999999999999864 3 47889999999999998875
No 92
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.3e-21 Score=191.51 Aligned_cols=181 Identities=26% Similarity=0.332 Sum_probs=152.6
Q ss_pred cCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecc
Q 015202 19 NLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLG 98 (411)
Q Consensus 19 ~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 98 (411)
+|+.|+|++|++++ +|..+ +++|++|+|++|.++ .+| ..+++|++|++++|.+++ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999986 55544 378999999999998 555 457899999999999997 666 665 99999999
Q ss_pred cccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCC
Q 015202 99 SNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIP 178 (411)
Q Consensus 99 ~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 178 (411)
+|.++.+|. .+++|+.|++++|.+++ +|. .+++|+.|++++|.+++ +|. |. ++|+.|++++|.++ .+|
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 999999987 68999999999999985 665 57899999999999986 555 65 89999999999998 556
Q ss_pred ccccCCCCC-------CEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 179 DFIGGLINL-------KSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 179 ~~~~~~~~L-------~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
. +.. +| +.|++++|.++ .+|..+..+++|+.|++++|++++.+|
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp C-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 5 544 77 99999999999 577778889999999999999987655
No 93
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.5e-21 Score=167.72 Aligned_cols=174 Identities=24% Similarity=0.300 Sum_probs=129.9
Q ss_pred CeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCC
Q 015202 45 QLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSN 123 (411)
Q Consensus 45 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n 123 (411)
+.++.+++.++. +|..+ .++|++|++++|.+++..+..|..+++|+.|++++|+++.+|.. +..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 466777776663 33332 35788888888888866666677888888888888888877665 357788888888888
Q ss_pred eeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccch
Q 015202 124 SFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPI 203 (411)
Q Consensus 124 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 203 (411)
.++...+..+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~---- 162 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC---- 162 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----
Confidence 8876556667788888888888888887767677778888888888888886666667778888888888887764
Q ss_pred hhhcCCCCCEEEcccCcccccCCCC
Q 015202 204 SLEKLLDLQHINVSFNKLEGEIPRE 228 (411)
Q Consensus 204 ~~~~l~~L~~l~l~~n~l~~~~~~~ 228 (411)
.+++|+.|+++.|.++|.+|..
T Consensus 163 ---~~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 163 ---TCPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp ---CTTTTHHHHHHHHHCTTTBBCT
T ss_pred ---CCCCHHHHHHHHHhCCceeecc
Confidence 3456777788888888777753
No 94
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=3.7e-21 Score=188.30 Aligned_cols=183 Identities=27% Similarity=0.350 Sum_probs=156.1
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
+++|.|++ +|..+. ++|+.|+|++|+++ .+| ..+++|++|++++|.+++ +|. +.+ +|++|+|++|.+++
T Consensus 66 Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~ 134 (571)
T 3cvr_A 66 LNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM 134 (571)
T ss_dssp CCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC
T ss_pred eCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC
Confidence 57889988 888664 89999999999998 556 568999999999999997 565 554 99999999999997
Q ss_pred cCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGL 160 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~ 160 (411)
+|. .+++|+.|++++|.++.+|. .+++|+.|++++|.+++ +|. |. ++|+.|++++|.++ .+|. +..
T Consensus 135 -lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~- 200 (571)
T 3cvr_A 135 -LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV- 200 (571)
T ss_dssp -CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC--
T ss_pred -CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH-
Confidence 555 67999999999999999987 57899999999999995 666 65 89999999999998 5565 554
Q ss_pred Ccc-------CeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCC
Q 015202 161 KDL-------QYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLD 210 (411)
Q Consensus 161 ~~L-------~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 210 (411)
+| +.|++++|.++ .+|..+..+++|+.|++++|.+++..|..+..+..
T Consensus 201 -~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 201 -RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp --------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred -hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 77 99999999999 57777777999999999999999999988877543
No 95
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.85 E-value=3.4e-21 Score=174.19 Aligned_cols=174 Identities=28% Similarity=0.355 Sum_probs=153.8
Q ss_pred cccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLR 93 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 93 (411)
+..+++|+.|++++|.+... + .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++. ..+..+++|+
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~ 115 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLK 115 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCC
Confidence 46788999999999999854 3 48899999999999999996654 89999999999999999863 3489999999
Q ss_pred eeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 94 KLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.|++++|.++.++ .+..+++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+
T Consensus 116 ~L~L~~n~i~~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i 190 (291)
T 1h6t_A 116 SLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHI 190 (291)
T ss_dssp EEECTTSCCCCCG-GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCCh-hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcC
Confidence 9999999999885 688999999999999999854 578999999999999999987655 88999999999999999
Q ss_pred cccCCccccCCCCCCEEeCCCCccccc
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
++. + .+..+++|+.|++++|.++..
T Consensus 191 ~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 191 SDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred CCC-h-hhccCCCCCEEECcCCcccCC
Confidence 854 4 488999999999999999753
No 96
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=2.3e-21 Score=191.75 Aligned_cols=193 Identities=24% Similarity=0.351 Sum_probs=118.9
Q ss_pred CCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeee
Q 015202 17 LTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLY 96 (411)
Q Consensus 17 ~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 96 (411)
+.++..+.+..+.+....+ +..+++|+.|++++|.+... + .+..+++|+.|+|++|.+.+..+ +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3445555555555554333 45666666666666666533 2 45666666666666666664433 66666666666
Q ss_pred cccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccccccc
Q 015202 97 LGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGS 176 (411)
Q Consensus 97 l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 176 (411)
|++|.++.+| .+..+++|+.|+|++|.+.. + ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.
T Consensus 94 Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 94 LDENKIKDLS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CCSSCCCCCT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred CcCCCCCCCh-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 6666666655 45666666666666666663 2 3466666666666666666644 4556666677777777766654
Q ss_pred CCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCccccc
Q 015202 177 IPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGE 224 (411)
Q Consensus 177 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 224 (411)
.| +..+++|+.|+|++|.+++. ..+..+++|+.|++++|++.+.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 44 56666677777777766643 2456666677777776666543
No 97
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.85 E-value=4.6e-23 Score=199.18 Aligned_cols=222 Identities=17% Similarity=0.121 Sum_probs=125.3
Q ss_pred CCCCcccccCChhccc-----CCcCCceeecCcccccc----cchhhhCCCCCCeeecccCcccccCchhhhc-----cc
Q 015202 1 MFNCNISGSIPEEINN-----LTNLIAIYLGGNKLNGS----ISIALGKLQKLQLLGLEDNQLEGSIPYDLCR-----LA 66 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~-----~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l~ 66 (411)
+++|.+++..+..+.. .++|++|++++|++++. ++..+..+++|++|++++|.+++..+..+.. ++
T Consensus 120 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~ 199 (461)
T 1z7x_W 120 LSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPC 199 (461)
T ss_dssp CCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCC
T ss_pred CCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCC
Confidence 4566666554543322 34677777777776643 2445566677777777777666443333322 44
Q ss_pred cCCeeeecCCccccc----CCccccCCccCCeeecccccCCcc-----Cccc-cCCCCCcEEEcCCCeeeec----CCCC
Q 015202 67 ALFQLDLGDNKLSGF----VPSCFGNLTNLRKLYLGSNQLTYI-----PLTL-WNLKYILYLNLSSNSFTIP----LPSE 132 (411)
Q Consensus 67 ~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~-----p~~~-~~~~~L~~L~l~~n~l~~~----~~~~ 132 (411)
+|++|++++|.++.. ++..+..+++|+.|++++|.++.. ...+ ..+++|+.|++++|.++.. ++..
T Consensus 200 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 279 (461)
T 1z7x_W 200 QLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRV 279 (461)
T ss_dssp CCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHH
T ss_pred CceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHH
Confidence 677777777766642 344555666777777777666532 1222 2456667777776666532 3444
Q ss_pred ccCccCCCeEEccCCeecccCCCCccC-----CCccCeeeccccccccc----CCccccCCCCCCEEeCCCCccccccch
Q 015202 133 IGNLEVLVQIDLSMNNFSGAIPTTIGG-----LKDLQYLFLEYNRLQGS----IPDFIGGLINLKSLDLSNNNLSGAIPI 203 (411)
Q Consensus 133 ~~~l~~L~~L~l~~n~~~~~~~~~~~~-----~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~ 203 (411)
+..+++|+.|++++|.+++..+..+.. .++|+.|++++|.+++. ++..+..+++|+.|++++|.+++..+.
T Consensus 280 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 359 (461)
T 1z7x_W 280 LRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVR 359 (461)
T ss_dssp HHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHH
T ss_pred HhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHH
Confidence 555666666666666665433222221 24666666666666543 233444556666666666666544333
Q ss_pred hhhc-----CCCCCEEEcccCccc
Q 015202 204 SLEK-----LLDLQHINVSFNKLE 222 (411)
Q Consensus 204 ~~~~-----l~~L~~l~l~~n~l~ 222 (411)
.+.. .++|+.|++++|.++
T Consensus 360 ~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 360 ELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HHHHHHcCCCCceEEEECCCCCCC
Confidence 3332 456666666666665
No 98
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.85 E-value=6.3e-21 Score=188.62 Aligned_cols=185 Identities=26% Similarity=0.339 Sum_probs=160.3
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
..+.+.+.++ +..+++|+.|++++|.+... + .+..+++|+.|+|++|.+.+..+ +..+++|+.|+|++|.+.+.
T Consensus 29 ~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l 102 (605)
T 1m9s_A 29 KKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL 102 (605)
T ss_dssp TCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC
Confidence 3445555444 46889999999999999744 3 58999999999999999997655 89999999999999999853
Q ss_pred CCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCC
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLK 161 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~ 161 (411)
..+..+++|+.|+|++|.++.++ .+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+++..| +..++
T Consensus 103 --~~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~ 175 (605)
T 1m9s_A 103 --SSLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLT 175 (605)
T ss_dssp --TTSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred --hhhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCC
Confidence 37899999999999999999875 588999999999999999854 678999999999999999997766 88999
Q ss_pred ccCeeecccccccccCCccccCCCCCCEEeCCCCcccccc
Q 015202 162 DLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAI 201 (411)
Q Consensus 162 ~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 201 (411)
+|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..
T Consensus 176 ~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 176 KLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp TCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred CCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 999999999999864 35889999999999999998653
No 99
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=8.4e-21 Score=177.18 Aligned_cols=179 Identities=26% Similarity=0.233 Sum_probs=93.9
Q ss_pred CceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhh-ccccCCeeeecCCcccccCCccccCCccCCeeeccc
Q 015202 21 IAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLC-RLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGS 99 (411)
Q Consensus 21 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 99 (411)
+.+++++++++. +|..+. +.++.|+|++|.+++..+..|. ++++|++|+|++|.+++..+..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 355555555542 332221 2355555555555544444444 555555555555555544444455555555555555
Q ss_pred ccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCc
Q 015202 100 NQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPD 179 (411)
Q Consensus 100 n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 179 (411)
|+++.+ .+..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|.+++..+.
T Consensus 98 N~l~~~-----------------------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 98 NHLHTL-----------------------DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SCCCEE-----------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CcCCcC-----------------------CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 555444 344445555555555555555555555555555555555555555543333
Q ss_pred cc---cCCCCCCEEeCCCCccccccchhhhcCCC--CCEEEcccCcccccC
Q 015202 180 FI---GGLINLKSLDLSNNNLSGAIPISLEKLLD--LQHINVSFNKLEGEI 225 (411)
Q Consensus 180 ~~---~~~~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~l~l~~n~l~~~~ 225 (411)
.+ ..+++|+.|++++|.+++..+..+..++. ++.|++++|++.|.+
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCc
Confidence 33 34566666666666666555555555554 356666666666543
No 100
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=3.6e-23 Score=199.91 Aligned_cols=223 Identities=20% Similarity=0.174 Sum_probs=114.7
Q ss_pred CCCCcccccCChhc-ccCC----cCCceeecCccccc----ccchhhhCCCCCCeeecccCcccccCchhhhc-----cc
Q 015202 1 MFNCNISGSIPEEI-NNLT----NLIAIYLGGNKLNG----SISIALGKLQKLQLLGLEDNQLEGSIPYDLCR-----LA 66 (411)
Q Consensus 1 l~~n~~~~~~p~~~-~~~~----~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-----l~ 66 (411)
|++|.+++..+..+ ..++ +|++|+|++|.++. .++..+.++++|++|++++|.+++..+..+.. .+
T Consensus 63 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 142 (461)
T 1z7x_W 63 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQC 142 (461)
T ss_dssp CTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCC
Confidence 35566665544433 2333 57777777776663 34566666777777777777665443333222 34
Q ss_pred cCCeeeecCCcccccC----CccccCCccCCeeecccccCCcc-----Ccccc-CCCCCcEEEcCCCeeeec----CCCC
Q 015202 67 ALFQLDLGDNKLSGFV----PSCFGNLTNLRKLYLGSNQLTYI-----PLTLW-NLKYILYLNLSSNSFTIP----LPSE 132 (411)
Q Consensus 67 ~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~-----p~~~~-~~~~L~~L~l~~n~l~~~----~~~~ 132 (411)
+|++|++++|.+++.. +..+..+++|+.|++++|.++.. ...+. ..++|+.|++++|.++.. ++..
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 5666666666665422 33444556666666666665421 11111 234566666666655532 2444
Q ss_pred ccCccCCCeEEccCCeecccC-----CCCccCCCccCeeeccccccccc----CCccccCCCCCCEEeCCCCccccccch
Q 015202 133 IGNLEVLVQIDLSMNNFSGAI-----PTTIGGLKDLQYLFLEYNRLQGS----IPDFIGGLINLKSLDLSNNNLSGAIPI 203 (411)
Q Consensus 133 ~~~l~~L~~L~l~~n~~~~~~-----~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~ 203 (411)
+..+++|+.|++++|.+++.. +..+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+.+..+.
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~ 302 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGAR 302 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHH
T ss_pred HHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHH
Confidence 445556666666666554321 11122345566666666655532 333444455555555555555433332
Q ss_pred hhhcC-----CCCCEEEcccCcccc
Q 015202 204 SLEKL-----LDLQHINVSFNKLEG 223 (411)
Q Consensus 204 ~~~~l-----~~L~~l~l~~n~l~~ 223 (411)
.+... ++|+.|++++|.+++
T Consensus 303 ~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 303 LLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred HHHHHhccCCccceeeEcCCCCCch
Confidence 22221 355555555555543
No 101
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.84 E-value=2.2e-20 Score=161.68 Aligned_cols=154 Identities=22% Similarity=0.276 Sum_probs=87.2
Q ss_pred eeeecCCcccccCCccccCCccCCeeecccccCCccCc--cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCC
Q 015202 70 QLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMN 147 (411)
Q Consensus 70 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 147 (411)
.+++++|.++. +|..+. +.++.|++++|.++.++. .+..+++|+.|++++|.+++..+..|.++++|+.|++++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 44555555442 333332 234455555555554421 2345555555555555555444555556666666666666
Q ss_pred eecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 148 NFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 148 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
.+++..+..|..+++|+.|++++|.+++..|..|..+++|+.|++++|.+++..|..+..+++|+.|++++|++.|.++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 6665555556666666666666666665556666666666666666666665556666666666666666666665543
No 102
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.84 E-value=3.4e-20 Score=160.53 Aligned_cols=153 Identities=22% Similarity=0.273 Sum_probs=85.4
Q ss_pred eeeecCCcccccCCccccCCccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCe
Q 015202 70 QLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNN 148 (411)
Q Consensus 70 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 148 (411)
.++++++.++ .+|..+. ++|+.|++++|.++.++. .+..+++|+.|++++|.+++..|..|.++++|+.|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 3444444444 2333332 345555555555554443 34445555555555555555555555556666666666666
Q ss_pred ecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccC
Q 015202 149 FSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 149 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 225 (411)
++...+..|..+++|+.|+|++|.+++..|..|..+++|+.|++++|.+++..+..+..+++|+.+++++|++.+.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 65554455555666666666666666555556666666666666666666555555666666666666666665543
No 103
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=4.3e-20 Score=159.89 Aligned_cols=150 Identities=24% Similarity=0.307 Sum_probs=87.9
Q ss_pred CceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccc
Q 015202 21 IAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSN 100 (411)
Q Consensus 21 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 100 (411)
+.++++++.++ .+|..+. ++|+.|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46677777776 3343332 56777777777777666666777777777777777777666777777777777777777
Q ss_pred cCCccCccc-cCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 101 QLTYIPLTL-WNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 101 ~l~~~p~~~-~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.++.+|... ..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+++..+..|..+++|+.|++++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 776666543 3455555555555555544444444444444444444444444433444444444444444433
No 104
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=5.8e-20 Score=170.78 Aligned_cols=215 Identities=18% Similarity=0.106 Sum_probs=171.4
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcccccccc-hhhhCCCCCCe-eecccCcccccCchhhhccccCCeeeecCCcc
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNKLNGSIS-IALGKLQKLQL-LGLEDNQLEGSIPYDLCRLAALFQLDLGDNKL 78 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~-L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 78 (411)
|++|+|+..-+.+|.++++|++|+|++|++.+.+| .+|.+++++++ +.+.+|+++...|+.|..+++|++|++++|.+
T Consensus 37 Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 37 FVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp EESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECC
T ss_pred ccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccccc
Confidence 46889987666789999999999999999866554 57899999876 56677999988888999999999999999999
Q ss_pred cccCCccccCCccCCeeeccc-ccCCccCcc-ccCC-CCCcEEEcCCCeeeecCCCCccCccCCCeEEccC-CeecccCC
Q 015202 79 SGFVPSCFGNLTNLRKLYLGS-NQLTYIPLT-LWNL-KYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSM-NNFSGAIP 154 (411)
Q Consensus 79 ~~~~~~~~~~l~~L~~L~l~~-n~l~~~p~~-~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~-n~~~~~~~ 154 (411)
....+..+....++..|++.+ +.+..++.. +..+ ..++.|++++|.++. ++.......+|+.|++++ |.++.+.+
T Consensus 117 ~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~ 195 (350)
T 4ay9_X 117 KHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPN 195 (350)
T ss_dssp SSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCT
T ss_pred ccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCH
Confidence 977777777778888999865 578888764 3344 468999999999984 555555667899999985 77776666
Q ss_pred CCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCc
Q 015202 155 TTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNK 220 (411)
Q Consensus 155 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~ 220 (411)
..|..+++|+.|++++|+++...+.. +.+|+.|.+.++.--..+| .+..+++|+.++++++.
T Consensus 196 ~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 196 DVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred HHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 78899999999999999999555544 4566677666554444566 47889999999997654
No 105
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=9e-22 Score=193.50 Aligned_cols=180 Identities=25% Similarity=0.225 Sum_probs=94.7
Q ss_pred ccCCcCCceeecCcccccccchhhhCCCCCCeeecccCc-------------ccccCchhhhccccCCeee-ecCCcccc
Q 015202 15 NNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-------------LEGSIPYDLCRLAALFQLD-LGDNKLSG 80 (411)
Q Consensus 15 ~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~-l~~n~l~~ 80 (411)
..+++|+.|+|++|.++ .+|..+++|++|+.|++++|. +.+..|+.+..+++|+.|+ ++.|.+..
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~ 424 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDD 424 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccch
Confidence 44566777777777775 566677777777777776553 3445555666666666666 44443221
Q ss_pred cCCc------cccC--CccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeeccc
Q 015202 81 FVPS------CFGN--LTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGA 152 (411)
Q Consensus 81 ~~~~------~~~~--l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 152 (411)
. +. .+.. ...|+.|++++|.++.+|. +..+++|+.|++++|.++ .+|..++.+++|+.|+|++|.+++
T Consensus 425 L-~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~- 500 (567)
T 1dce_A 425 L-RSKFLLENSVLKMEYADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN- 500 (567)
T ss_dssp H-HHHHHHHHHHHHHHHTTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-
T ss_pred h-hhhhhhcccccccCccCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-
Confidence 0 00 0000 0134555555555555543 445555555555555554 444455555555555555555543
Q ss_pred CCCCccCCCccCeeecccccccccC-CccccCCCCCCEEeCCCCccccc
Q 015202 153 IPTTIGGLKDLQYLFLEYNRLQGSI-PDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 153 ~~~~~~~~~~L~~L~l~~n~l~~~~-~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
+| .++.+++|+.|+|++|.+++.. |..+..+++|+.|++++|.+++.
T Consensus 501 lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 501 VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 23 4445555555555555555443 44555555555555555555443
No 106
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.1e-20 Score=174.50 Aligned_cols=170 Identities=23% Similarity=0.226 Sum_probs=129.5
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhh-CCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALG-KLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
++|.++. +|..+. +.++.|+|++|++++..+..|. ++++|++|+|++|.+++..+..|.++++|++|+|++|.++.
T Consensus 26 ~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~ 102 (361)
T 2xot_A 26 SKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT 102 (361)
T ss_dssp CSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCc
Confidence 4455554 677554 5689999999999988888887 99999999999999998888889999999999999999998
Q ss_pred cCCccccCCccCCeeecccccCCcc-CccccCCCCCcEEEcCCCeeeecCCCCc---cCccCCCeEEccCCeecccCCCC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYI-PLTLWNLKYILYLNLSSNSFTIPLPSEI---GNLEVLVQIDLSMNNFSGAIPTT 156 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~-p~~~~~~~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~~~~~~~~~ 156 (411)
..+..|..+++|+.|+|++|.++.+ |..+..+++|+.|++++|.++...+..| ..+++|+.|+|++|.+++..+..
T Consensus 103 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~ 182 (361)
T 2xot_A 103 LDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTD 182 (361)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHH
T ss_pred CCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHH
Confidence 8888899999999999999999876 4566678888888888888774333333 44666666677666666444444
Q ss_pred ccCCCc--cCeeeccccccc
Q 015202 157 IGGLKD--LQYLFLEYNRLQ 174 (411)
Q Consensus 157 ~~~~~~--L~~L~l~~n~l~ 174 (411)
+..++. ++.|++++|.+.
T Consensus 183 ~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 183 LQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp HHHSCHHHHTTEECCSSCEE
T ss_pred hhhccHhhcceEEecCCCcc
Confidence 444444 255555555543
No 107
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=157.17 Aligned_cols=154 Identities=21% Similarity=0.257 Sum_probs=85.4
Q ss_pred CceeecCcccccccchhhhCCCCCCeeecccCcccccCc-hhhhccccCCeeeecCCcccccCCccccCCccCCeeeccc
Q 015202 21 IAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIP-YDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGS 99 (411)
Q Consensus 21 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 99 (411)
+.+++++|.++. +|..+ ...+++|+|++|.+++..+ ..|..+++|++|+|++|.+++..+..|..+++|+.|++++
T Consensus 14 ~~l~~s~n~l~~-iP~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 466666666653 33322 2234566666666665533 2355666666666666666655555555555555555555
Q ss_pred ccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCc
Q 015202 100 NQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPD 179 (411)
Q Consensus 100 n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 179 (411)
|.++.++ +..|.++++|++|++++|.+++..|..|..+++|+.|+|++|.+++..|.
T Consensus 91 N~l~~~~-----------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQ-----------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCC-----------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccC-----------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 5555444 33344455555555555555555555555555555555555555555555
Q ss_pred cccCCCCCCEEeCCCCccccc
Q 015202 180 FIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 180 ~~~~~~~L~~L~l~~n~l~~~ 200 (411)
.|..+++|+.|++++|.+...
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECS
T ss_pred HhcCCCCCCEEEecCcCCcCC
Confidence 555566666666666665533
No 108
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=9.5e-20 Score=158.77 Aligned_cols=153 Identities=27% Similarity=0.306 Sum_probs=124.2
Q ss_pred CCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeeccc
Q 015202 20 LIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGS 99 (411)
Q Consensus 20 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 99 (411)
-+.++.+++.++ .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+....+..|..+++|+.|++++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456788888876 444433 27888888888888887788888888888888888888866667778888888888888
Q ss_pred ccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccccccc
Q 015202 100 NQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGS 176 (411)
Q Consensus 100 n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 176 (411)
|.++.++.. +..+++|+.|++++|.+. .+|..+..+++|+.|++++|.+++..+..|..+++|+.|++++|.+...
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 888887765 457888888999888888 7788888888899999999988877777788888999999999888743
No 109
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.82 E-value=1.4e-20 Score=167.50 Aligned_cols=177 Identities=20% Similarity=0.270 Sum_probs=112.4
Q ss_pred ccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCcc
Q 015202 6 ISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSC 85 (411)
Q Consensus 6 ~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 85 (411)
+....|+ .++.++..++++++.+++.. .+..+++|++|++++|.++.. + .+..+++|++|++++|.+++..+
T Consensus 9 i~~~~pd--~~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-- 80 (263)
T 1xeu_A 9 INQVFPD--PGLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-- 80 (263)
T ss_dssp HHHHCCS--HHHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--
T ss_pred HHHhCCC--HHHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--
Confidence 3444555 25677788888888887444 577888888888888887743 3 57778888888888888875543
Q ss_pred ccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCe
Q 015202 86 FGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQY 165 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 165 (411)
+..+++|+.|++++|+++.+|.... ++|+.|++++|.+++ ++ .+..+++|+.|++++|.+++. + .+..+++|+.
T Consensus 81 l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~ 154 (263)
T 1xeu_A 81 LKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEV 154 (263)
T ss_dssp GTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCE
T ss_pred hccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCE
Confidence 7778888888888888877764332 666777777666663 22 355556666666666655543 1 3445555555
Q ss_pred eecccccccccCCccccCCCCCCEEeCCCCccc
Q 015202 166 LFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLS 198 (411)
Q Consensus 166 L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~ 198 (411)
|++++|.+++. ..+..+++|+.|++++|.++
T Consensus 155 L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 155 LDLHGNEITNT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp EECTTSCCCBC--TTSTTCCCCCEEEEEEEEEE
T ss_pred EECCCCcCcch--HHhccCCCCCEEeCCCCccc
Confidence 55555555433 33444444555555544444
No 110
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.8e-19 Score=154.98 Aligned_cols=152 Identities=26% Similarity=0.349 Sum_probs=88.0
Q ss_pred CCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCC
Q 015202 44 LQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSS 122 (411)
Q Consensus 44 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~ 122 (411)
.+.++.+++.++ .+|..+. ++|++|+|++|.+.+..|..|..+++|+.|++++|+++.+|.. +..+++|+.|++++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 345666666665 3333222 5666677777766666666666666666666666666666543 34566666666666
Q ss_pred CeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCcccc
Q 015202 123 NSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSG 199 (411)
Q Consensus 123 n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 199 (411)
|.++...+..|..+++|+.|++++|.++ .+|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+..
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 6665444444555566666666666555 445555555555555555555554444445555555555555555543
No 111
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=3.4e-21 Score=189.43 Aligned_cols=187 Identities=17% Similarity=0.114 Sum_probs=155.1
Q ss_pred CCCCcccccCChhcccCCcCCceeecCcc-------------cccccchhhhCCCCCCeee-cccCcccccCch-----h
Q 015202 1 MFNCNISGSIPEEINNLTNLIAIYLGGNK-------------LNGSISIALGKLQKLQLLG-LEDNQLEGSIPY-----D 61 (411)
Q Consensus 1 l~~n~~~~~~p~~~~~~~~L~~L~l~~n~-------------~~~~~~~~~~~l~~L~~L~-l~~n~l~~~~~~-----~ 61 (411)
|++|+++ .+|+.++++++|+.|++++|. ..+..|..+.++++|+.|+ ++.|.+.....- .
T Consensus 356 Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~~L~~l~l~~n~ 434 (567)
T 1dce_A 356 LSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSKFLLENS 434 (567)
T ss_dssp CCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHH
T ss_pred CChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccchhhhhhhhccc
Confidence 4567775 789999999999999998775 5677888899999999999 676654422110 1
Q ss_pred hhc--cccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCC
Q 015202 62 LCR--LAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVL 139 (411)
Q Consensus 62 ~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L 139 (411)
+.. ...|++|+|++|.+++ +|. +..+++|+.|++++|.++.+|..+..+++|+.|++++|.+++ +| .++.+++|
T Consensus 435 i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L 510 (567)
T 1dce_A 435 VLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRL 510 (567)
T ss_dssp HHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSC
T ss_pred ccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCC
Confidence 111 2369999999999996 566 999999999999999999999999999999999999999995 66 89999999
Q ss_pred CeEEccCCeecccC-CCCccCCCccCeeecccccccccCCcc---ccCCCCCCEEeC
Q 015202 140 VQIDLSMNNFSGAI-PTTIGGLKDLQYLFLEYNRLQGSIPDF---IGGLINLKSLDL 192 (411)
Q Consensus 140 ~~L~l~~n~~~~~~-~~~~~~~~~L~~L~l~~n~l~~~~~~~---~~~~~~L~~L~l 192 (411)
+.|+|++|.+++.. |..+..+++|+.|++++|.+++.+|.. +..+++|+.|++
T Consensus 511 ~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 511 QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred cEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 99999999999887 999999999999999999999765532 234677777754
No 112
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.80 E-value=2.3e-19 Score=152.59 Aligned_cols=153 Identities=18% Similarity=0.235 Sum_probs=108.8
Q ss_pred hccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeE
Q 015202 63 CRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQI 142 (411)
Q Consensus 63 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 142 (411)
..+++|++|++++|.+. .+| .+..+++|+.|++++|.++.++ .+..+++|++|++++|.+++..+..+..+++|+.|
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 45666777777777766 334 4666677777777777665554 56667777777777777776667777777888888
Q ss_pred EccCCeecccCCCCccCCCccCeeeccccc-ccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcc
Q 015202 143 DLSMNNFSGAIPTTIGGLKDLQYLFLEYNR-LQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKL 221 (411)
Q Consensus 143 ~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~-l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l 221 (411)
++++|.+++..+..+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 888888777667777778888888888887 55 344 577788888888888888753 3 677788888888888876
Q ss_pred c
Q 015202 222 E 222 (411)
Q Consensus 222 ~ 222 (411)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 5
No 113
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=2.3e-19 Score=152.61 Aligned_cols=152 Identities=17% Similarity=0.247 Sum_probs=96.7
Q ss_pred hCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCc-cCccccCCCCCcE
Q 015202 39 GKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTY-IPLTLWNLKYILY 117 (411)
Q Consensus 39 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~p~~~~~~~~L~~ 117 (411)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.+.. +..+..+++|+.|++++|.++. .+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 55666667777766666 333 46666667777777665542 2356666677777777776663 4556666677777
Q ss_pred EEcCCCeeeecCCCCccCccCCCeEEccCCe-ecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCc
Q 015202 118 LNLSSNSFTIPLPSEIGNLEVLVQIDLSMNN-FSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNN 196 (411)
Q Consensus 118 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~ 196 (411)
|++++|.+++..+..+..+++|+.|++++|. ++ .++ .+..+++|+.|++++|.+++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 7777777665556666667777777777776 44 333 466677777777777777643 2 46667777777777777
Q ss_pred cc
Q 015202 197 LS 198 (411)
Q Consensus 197 l~ 198 (411)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 114
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.79 E-value=5.3e-19 Score=157.30 Aligned_cols=161 Identities=20% Similarity=0.291 Sum_probs=139.2
Q ss_pred CCCcccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCccccc
Q 015202 2 FNCNISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGF 81 (411)
Q Consensus 2 ~~n~~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 81 (411)
++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++..+ +..+++|++|++++|.+++.
T Consensus 27 ~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~l 100 (263)
T 1xeu_A 27 GKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKNL 100 (263)
T ss_dssp TCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSCC
T ss_pred cCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCCc
Confidence 456666544 57899999999999999984 44 78999999999999999996654 89999999999999999964
Q ss_pred CCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCC
Q 015202 82 VPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLK 161 (411)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~ 161 (411)
|. +.. ++|+.|++++|.++.++ .+..+++|+.|++++|.+++. + .+..+++|+.|++++|.+++. ..+..++
T Consensus 101 -~~-~~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~ 172 (263)
T 1xeu_A 101 -NG-IPS-ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLK 172 (263)
T ss_dssp -TT-CCC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCC
T ss_pred -Cc-ccc-CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCC
Confidence 33 333 89999999999999886 588999999999999999854 4 688999999999999999876 6788999
Q ss_pred ccCeeeccccccccc
Q 015202 162 DLQYLFLEYNRLQGS 176 (411)
Q Consensus 162 ~L~~L~l~~n~l~~~ 176 (411)
+|+.|++++|.++..
T Consensus 173 ~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 173 KVNWIDLTGQKCVNE 187 (263)
T ss_dssp CCCEEEEEEEEEECC
T ss_pred CCCEEeCCCCcccCC
Confidence 999999999999854
No 115
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=8.5e-20 Score=184.91 Aligned_cols=182 Identities=24% Similarity=0.246 Sum_probs=105.3
Q ss_pred ccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCC
Q 015202 33 SISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNL 112 (411)
Q Consensus 33 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~ 112 (411)
..+..|..+++|+.|+|++|.+. .+|..+..+++|++|+|++|.++ .+|..|..+++|+.|+|++|.++.+|..+..+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l 292 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSC 292 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCC
Confidence 44666778888888888888777 45555667788888888888887 66777788888888888888888888778888
Q ss_pred CCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCc-cCeeecccccccccCCccccCCCCCCEEe
Q 015202 113 KYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKD-LQYLFLEYNRLQGSIPDFIGGLINLKSLD 191 (411)
Q Consensus 113 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~-L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 191 (411)
++|++|+|++|.+. .+|..|+++++|+.|+|++|.+++.+|..+..+.. +..+++++|.+++.+|. .|+.|+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~ 365 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIE 365 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeE
Confidence 88888888888776 66777888888888888888887777766644322 23466777877766664 344555
Q ss_pred CCCC--------ccccccchhhhcCCCCCEEEcccCcccc
Q 015202 192 LSNN--------NLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 192 l~~n--------~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
++.| .+.+..+..+..+..+....+++|.+.+
T Consensus 366 l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~ 405 (727)
T 4b8c_D 366 INTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQ 405 (727)
T ss_dssp ------------------------------------CCCG
T ss_pred eecccccccccCCccccccchhhcccccceeeeecccccc
Confidence 6655 2333333344455556666777776653
No 116
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.78 E-value=3.3e-19 Score=150.89 Aligned_cols=131 Identities=22% Similarity=0.241 Sum_probs=100.2
Q ss_pred CeeeecCCcccccCCccccCCccCCeeecccccCCccCcc--ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccC
Q 015202 69 FQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLT--LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSM 146 (411)
Q Consensus 69 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~--~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 146 (411)
+++++++|.++ .+|..+.. +|+.|++++|.++.++.. +..+++|++|++++|.+++..|..|.++++|+.|++++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67788888886 45655543 788888888888877653 66788888888888888777777788888888888888
Q ss_pred CeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccc
Q 015202 147 NNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIP 202 (411)
Q Consensus 147 n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 202 (411)
|.+++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 88887777777778888888888888887777777777888888888888775543
No 117
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=4.9e-18 Score=143.66 Aligned_cols=132 Identities=26% Similarity=0.312 Sum_probs=71.0
Q ss_pred CeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCC-CccCccCCCeEEccCCeecccCCCCccCCCccCeeecccc
Q 015202 93 RKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPS-EIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYN 171 (411)
Q Consensus 93 ~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n 171 (411)
+.+++++|+++.+|..+.. +|+.|++++|.+.+..+. .|..+++|+.|++++|.+++..|..|..+++|+.|++++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4455555555555544432 555555555555533332 2555555555555555555555555555555555555555
Q ss_pred cccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 172 RLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 172 ~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
.+++..+..|..+++|++|++++|.+++..|..+..+++|+.|++++|+++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 5555555555555555555555555555555555555555555555555554443
No 118
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=3e-19 Score=180.87 Aligned_cols=181 Identities=23% Similarity=0.247 Sum_probs=126.1
Q ss_pred cCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccC
Q 015202 9 SIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGN 88 (411)
Q Consensus 9 ~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 88 (411)
..|+.|.++++|+.|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..|.++++|++|+|++|.++ .+|..|..
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 44778999999999999999998 66667779999999999999999 78889999999999999999999 67999999
Q ss_pred CccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccC-CCeEEccCCeecccCCCCccCCCccCeee
Q 015202 89 LTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEV-LVQIDLSMNNFSGAIPTTIGGLKDLQYLF 167 (411)
Q Consensus 89 l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~~~~~~~L~~L~ 167 (411)
+++|+.|+|++|.++.+|..+..+++|+.|+|++|.+++.+|..+..+.. +..+++++|.+++.+|.. |..|+
T Consensus 292 l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~ 365 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIE 365 (727)
T ss_dssp GTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------
T ss_pred CCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeE
Confidence 99999999999999999999999999999999999999888887765432 234789999999887754 45566
Q ss_pred cccc--------cccccCCccccCCCCCCEEeCCCCccc
Q 015202 168 LEYN--------RLQGSIPDFIGGLINLKSLDLSNNNLS 198 (411)
Q Consensus 168 l~~n--------~l~~~~~~~~~~~~~L~~L~l~~n~l~ 198 (411)
++.| .+.+..+..+..+..+....++.|.+.
T Consensus 366 l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 366 INTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------------------------------CCC
T ss_pred eecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 6666 333334444455566666777777764
No 119
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.1e-17 Score=152.20 Aligned_cols=82 Identities=12% Similarity=0.144 Sum_probs=58.2
Q ss_pred CCcCCceeecCcccc--------------------cccchhhhC--------CCCCCeeecccCcccccCchhhhccccC
Q 015202 17 LTNLIAIYLGGNKLN--------------------GSISIALGK--------LQKLQLLGLEDNQLEGSIPYDLCRLAAL 68 (411)
Q Consensus 17 ~~~L~~L~l~~n~~~--------------------~~~~~~~~~--------l~~L~~L~l~~n~l~~~~~~~~~~l~~L 68 (411)
+++|+.|+|++|++. .+.+.+|.+ |++|+.|+|++ .++.+.+.+|.+|++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 678999999999987 233445666 77777777777 6666666677777777
Q ss_pred CeeeecCCcccccCCccccCCccCCeeeccc
Q 015202 69 FQLDLGDNKLSGFVPSCFGNLTNLRKLYLGS 99 (411)
Q Consensus 69 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 99 (411)
++|++++|.+..+.+..|..+.++..+....
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 7777777777666666777666666655544
No 120
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.73 E-value=2.4e-17 Score=139.45 Aligned_cols=129 Identities=29% Similarity=0.378 Sum_probs=69.0
Q ss_pred eeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccc
Q 015202 94 KLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRL 173 (411)
Q Consensus 94 ~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l 173 (411)
.+++++|.++.+|..+. ++|+.|++++|.++ .+|..|.++++|+.|++++|.+++..+..|..+++|+.|+|++|.+
T Consensus 14 ~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 14 VVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 34444444444444332 34455555555544 3444455555555555555555555455555555555555555555
Q ss_pred cccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccC
Q 015202 174 QGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEI 225 (411)
Q Consensus 174 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~ 225 (411)
++..+..|..+++|+.|++++|.+++..+..+..+++|+.+++++|++.|.+
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 5555555555556666666666665444445555666666666666665543
No 121
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.73 E-value=4.2e-18 Score=140.88 Aligned_cols=131 Identities=24% Similarity=0.170 Sum_probs=81.6
Q ss_pred CCCCeeecccCccc-ccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCc-cCccccCCCCCcEEE
Q 015202 42 QKLQLLGLEDNQLE-GSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTY-IPLTLWNLKYILYLN 119 (411)
Q Consensus 42 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~p~~~~~~~~L~~L~ 119 (411)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|+.|++++|.++. +|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 55666666666665 44555556666666666666666644 556666666666666666665 444444566666666
Q ss_pred cCCCeeeecC-CCCccCccCCCeEEccCCeecccCC---CCccCCCccCeeeccccccc
Q 015202 120 LSSNSFTIPL-PSEIGNLEVLVQIDLSMNNFSGAIP---TTIGGLKDLQYLFLEYNRLQ 174 (411)
Q Consensus 120 l~~n~l~~~~-~~~~~~l~~L~~L~l~~n~~~~~~~---~~~~~~~~L~~L~l~~n~l~ 174 (411)
+++|.+++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666665321 1456666777777777777765444 35666777777777777765
No 122
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=2.5e-17 Score=136.26 Aligned_cols=131 Identities=25% Similarity=0.222 Sum_probs=62.9
Q ss_pred CcCCceeecCcccc-cccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeee
Q 015202 18 TNLIAIYLGGNKLN-GSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLY 96 (411)
Q Consensus 18 ~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 96 (411)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+.+.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555544 34444444555555555555554433 3444455555555555555444444444455555555
Q ss_pred cccccCCccC--ccccCCCCCcEEEcCCCeeeecCC---CCccCccCCCeEEccCCeec
Q 015202 97 LGSNQLTYIP--LTLWNLKYILYLNLSSNSFTIPLP---SEIGNLEVLVQIDLSMNNFS 150 (411)
Q Consensus 97 l~~n~l~~~p--~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l~~n~~~ 150 (411)
+++|.++.+| ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555555443 344445555555555555442222 24444555555555555443
No 123
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=8.3e-18 Score=136.18 Aligned_cols=125 Identities=22% Similarity=0.254 Sum_probs=69.5
Q ss_pred CcCCceeecCcccc-cccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeee
Q 015202 18 TNLIAIYLGGNKLN-GSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLY 96 (411)
Q Consensus 18 ~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 96 (411)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45666666666665 45555556666666666666666544 4455566666666666666654555555556666666
Q ss_pred cccccCCccC--ccccCCCCCcEEEcCCCeeeecCC---CCccCccCCCeEEc
Q 015202 97 LGSNQLTYIP--LTLWNLKYILYLNLSSNSFTIPLP---SEIGNLEVLVQIDL 144 (411)
Q Consensus 97 l~~n~l~~~p--~~~~~~~~L~~L~l~~n~l~~~~~---~~~~~l~~L~~L~l 144 (411)
+++|.++.++ ..+..+++|+.|++++|.+++..+ ..+..+++|+.|++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 6666655543 444455555555555555543222 23444444444444
No 124
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.70 E-value=1.2e-16 Score=133.33 Aligned_cols=132 Identities=25% Similarity=0.277 Sum_probs=73.8
Q ss_pred CeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccc
Q 015202 93 RKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNR 172 (411)
Q Consensus 93 ~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~ 172 (411)
+.+++++|+++.+|..+. ++|+.|++++|.+.+..+..+..+++|+.|++++|.+++..+..|..+++|+.|++++|.
T Consensus 10 ~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 87 (177)
T 2o6r_A 10 TEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENK 87 (177)
T ss_dssp TEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCC
Confidence 444555555555543332 455555555555554444445555566666666666655555555556666666666666
Q ss_pred ccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 173 LQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 173 l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
+++..+..+..+++|+.|++++|.+++..+..+..+++|+.+++++|++.+.+|
T Consensus 88 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 88 LQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 665555555556666666666666665444445556666666666666655444
No 125
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=133.75 Aligned_cols=128 Identities=27% Similarity=0.350 Sum_probs=108.4
Q ss_pred CeeeecCCcccccCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCe
Q 015202 69 FQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNN 148 (411)
Q Consensus 69 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 148 (411)
+++++++|.++ .+|..+. ++|+.|++++|.++.+|..+..+++|+.|++++|.++...+..|.++++|+.|+|++|.
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 56778888877 4555443 57888888888888888888888889999999998887777788899999999999999
Q ss_pred ecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCcccc
Q 015202 149 FSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSG 199 (411)
Q Consensus 149 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~ 199 (411)
+++..+..|..+++|+.|+|++|.++...+..|..+++|+.|++++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 998888889999999999999999997777778889999999999999874
No 126
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.4e-16 Score=146.71 Aligned_cols=207 Identities=15% Similarity=0.115 Sum_probs=148.9
Q ss_pred cCCcCCceeecCcccccccchhhhC-CCCCCeeecccCccc--------------------ccCchhhhc--------cc
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGK-LQKLQLLGLEDNQLE--------------------GSIPYDLCR--------LA 66 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~-l~~L~~L~l~~n~l~--------------------~~~~~~~~~--------l~ 66 (411)
.+.+++.|.++++ +....-..+.. +++|++|||++|.+. .+.+..|.+ |+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~ 101 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQ 101 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccC
Confidence 3668899999874 32222234444 899999999999988 233446777 89
Q ss_pred cCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccc-cCCCCCcEEEcCCCeee----ecCCCCc--------
Q 015202 67 ALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTL-WNLKYILYLNLSSNSFT----IPLPSEI-------- 133 (411)
Q Consensus 67 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~-~~~~~L~~L~l~~n~l~----~~~~~~~-------- 133 (411)
+|+.|+|.+ .++.+.+.+|.++++|+.|++++|.+..++... ..+.++..+.+..+... ......|
T Consensus 102 ~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~ 180 (329)
T 3sb4_A 102 TLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLET 180 (329)
T ss_dssp TCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEE
T ss_pred CCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccce
Confidence 999999988 788777788999999999999999887776543 35555555554432110 0000000
Q ss_pred ------------------------------------------cCccCCCeEEccCCeecccCCCCccCCCccCeeecccc
Q 015202 134 ------------------------------------------GNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYN 171 (411)
Q Consensus 134 ------------------------------------------~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n 171 (411)
..+++|+.+++++|.++.+.+.+|..+++|+.+++.+|
T Consensus 181 ~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n 260 (329)
T 3sb4_A 181 TIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN 260 (329)
T ss_dssp EEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT
T ss_pred eEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc
Confidence 02678888888888888777788888888999988887
Q ss_pred cccccCCccccCCCCCC-EEeCCCCccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 172 RLQGSIPDFIGGLINLK-SLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 172 ~l~~~~~~~~~~~~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
++.+.+.+|.++++|+ .+++.+ .++...+.+|..+++|+.+++++|.++...+
T Consensus 261 -i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 261 -LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp -CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred -cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 7767778888888888 888887 6776777888888888888888887765444
No 127
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.67 E-value=5.9e-17 Score=131.13 Aligned_cols=83 Identities=23% Similarity=0.178 Sum_probs=33.8
Q ss_pred ccCCeeeecCCccc-ccCCccccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEc
Q 015202 66 AALFQLDLGDNKLS-GFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDL 144 (411)
Q Consensus 66 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 144 (411)
++|++|++++|.++ +.+|..+..+++|+.|++++|.++.+ ..+..+++|+.|++++|.+++.+|..+..+++|+.|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 34444444444444 33344444444444444444444433 23333444444444444433323333333333444444
Q ss_pred cCCee
Q 015202 145 SMNNF 149 (411)
Q Consensus 145 ~~n~~ 149 (411)
++|.+
T Consensus 96 s~N~i 100 (149)
T 2je0_A 96 SGNKI 100 (149)
T ss_dssp TTSCC
T ss_pred CCCcC
Confidence 44433
No 128
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.66 E-value=7.6e-17 Score=134.35 Aligned_cols=109 Identities=24% Similarity=0.248 Sum_probs=54.7
Q ss_pred cccCCcCCceeecCcccccccchhhhCCC-CCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCccC
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALGKLQ-KLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNL 92 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 92 (411)
+.++.+|+.|++++|+++. ++. +..+. +|++|++++|.+++. +.+..+++|++|++++|.+++..+..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455555556665555552 232 22322 555555555555543 345555555555555555554333333555555
Q ss_pred CeeecccccCCccCc--cccCCCCCcEEEcCCCeee
Q 015202 93 RKLYLGSNQLTYIPL--TLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 93 ~~L~l~~n~l~~~p~--~~~~~~~L~~L~l~~n~l~ 126 (411)
+.|++++|.++.+|. .+..+++|+.|++++|.+.
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 555555555555544 3444444555555444444
No 129
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.66 E-value=1.5e-18 Score=147.66 Aligned_cols=135 Identities=22% Similarity=0.262 Sum_probs=76.2
Q ss_pred cccCCcCCceeecCcccccccch------hhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCcccc
Q 015202 14 INNLTNLIAIYLGGNKLNGSISI------ALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFG 87 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 87 (411)
+...+.++.++++.+.+++..|. .+.++++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 44555666666666666665554 56666666666666666664 34 5666666666666666666 3455555
Q ss_pred CCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCC-CCccCccCCCeEEccCCeeccc
Q 015202 88 NLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLP-SEIGNLEVLVQIDLSMNNFSGA 152 (411)
Q Consensus 88 ~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~l~~n~~~~~ 152 (411)
.+++|+.|++++|.++.+| .+..+++|+.|++++|.+....+ ..+..+++|+.|++++|.+++.
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 5566666666666666554 34455555555555555542111 2344444445555554444433
No 130
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.64 E-value=1.9e-18 Score=147.02 Aligned_cols=134 Identities=25% Similarity=0.250 Sum_probs=80.6
Q ss_pred hhCCCCCCeeecccCcccccCch------hhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCccCccccC
Q 015202 38 LGKLQKLQLLGLEDNQLEGSIPY------DLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLTLWN 111 (411)
Q Consensus 38 ~~~l~~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~~ 111 (411)
+.....++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|.++.+|..+..
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~ 91 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAV 91 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhc
Confidence 55666777777777777766655 67777777777777777775 44 666677777777777777766655555
Q ss_pred CCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCC-CCccCCCccCeeecccccccc
Q 015202 112 LKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIP-TTIGGLKDLQYLFLEYNRLQG 175 (411)
Q Consensus 112 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~~~~L~~L~l~~n~l~~ 175 (411)
+++|+.|++++|.+++ +| .+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+++
T Consensus 92 ~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 92 ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 5666666666666553 22 34455555555555555543211 233444444444444444443
No 131
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=3.2e-15 Score=124.59 Aligned_cols=132 Identities=22% Similarity=0.246 Sum_probs=88.6
Q ss_pred CCeeeecCCcccccCCccccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccC
Q 015202 68 LFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSM 146 (411)
Q Consensus 68 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 146 (411)
.+.+++++|.++. +|..+. ++|+.|++++|+++.+|.. +..+++|++|++++|.+++..+..+..+++|+.|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3455555555552 333222 4566666666666655543 34566666666666666654455567777777788888
Q ss_pred CeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccc
Q 015202 147 NNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIP 202 (411)
Q Consensus 147 n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 202 (411)
|.+++..+..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+.+..+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 87776666677778888888888888886666667778888888888888876554
No 132
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.62 E-value=1.1e-15 Score=127.28 Aligned_cols=132 Identities=20% Similarity=0.141 Sum_probs=77.1
Q ss_pred cCCccCCeeecccccCCccCccccCC-CCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCe
Q 015202 87 GNLTNLRKLYLGSNQLTYIPLTLWNL-KYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQY 165 (411)
Q Consensus 87 ~~l~~L~~L~l~~n~l~~~p~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~ 165 (411)
..+.+|+.|++++|.++.+|. +..+ ++|+.|++++|.+++. ..+..+++|+.|++++|.+++..+..+..+++|+.
T Consensus 16 ~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 334455555555555554432 2222 2555666666555533 34556666666666666666544444466666666
Q ss_pred eecccccccccCCc--cccCCCCCCEEeCCCCccccccch---hhhcCCCCCEEEcccCccc
Q 015202 166 LFLEYNRLQGSIPD--FIGGLINLKSLDLSNNNLSGAIPI---SLEKLLDLQHINVSFNKLE 222 (411)
Q Consensus 166 L~l~~n~l~~~~~~--~~~~~~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~l~l~~n~l~ 222 (411)
|++++|.++ .+|. .+..+++|+.|++++|.++...+. .+..+++|+.|+++.|...
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777666665 3333 566677777777777777633222 3667777777777777654
No 133
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.62 E-value=6.7e-17 Score=160.88 Aligned_cols=178 Identities=13% Similarity=0.087 Sum_probs=102.7
Q ss_pred cccCCcCCceeecCcccccc----cchhhhCCCCCCeeecccCccc----ccCchhhhccccCCeeeecCCcccccCCcc
Q 015202 14 INNLTNLIAIYLGGNKLNGS----ISIALGKLQKLQLLGLEDNQLE----GSIPYDLCRLAALFQLDLGDNKLSGFVPSC 85 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 85 (411)
..++++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.++..+.++++|++|++++|.+.+ ++..
T Consensus 160 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~ 238 (592)
T 3ogk_B 160 VTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGF 238 (592)
T ss_dssp HHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHH
T ss_pred HhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHH
Confidence 35778888888888887654 4445667888888888888776 2334445677888888888887774 4566
Q ss_pred ccCCccCCeeecccccCC----ccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCC-CCccCC
Q 015202 86 FGNLTNLRKLYLGSNQLT----YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIP-TTIGGL 160 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~----~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~~ 160 (411)
+..+++|+.|+++..... ..+..+..+++|+.|++.++... .+|..+..+++|+.|++++|.+++... ..+..+
T Consensus 239 ~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~ 317 (592)
T 3ogk_B 239 FKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKC 317 (592)
T ss_dssp HHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTC
T ss_pred HhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhC
Confidence 666777777777643221 22334445556666665554222 344445555566666666665443222 223455
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCC
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLS 193 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~ 193 (411)
++|+.|+++++-..+.++..+..+++|++|+++
T Consensus 318 ~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 318 PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 555555555221111222222344555555555
No 134
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.62 E-value=4.1e-17 Score=162.46 Aligned_cols=201 Identities=14% Similarity=0.068 Sum_probs=116.8
Q ss_pred cCCcCCceeecCcccccccchhhhC-CCC-CCeeecccCc-ccc-cCchhhhccccCCeeeecCCccccc----CCcccc
Q 015202 16 NLTNLIAIYLGGNKLNGSISIALGK-LQK-LQLLGLEDNQ-LEG-SIPYDLCRLAALFQLDLGDNKLSGF----VPSCFG 87 (411)
Q Consensus 16 ~~~~L~~L~l~~n~~~~~~~~~~~~-l~~-L~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~ 87 (411)
++++|++|+|++|.+++..+..+.. +++ |++|+|++|. ++. .++.....+++|++|+|++|.+.+. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 6788888888888777665555555 333 8888887775 221 1222234677888888888876644 222345
Q ss_pred CCccCCeeecccccCC-----ccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCee-------------
Q 015202 88 NLTNLRKLYLGSNQLT-----YIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNF------------- 149 (411)
Q Consensus 88 ~l~~L~~L~l~~n~l~-----~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~------------- 149 (411)
.+++|+.|++++|.++ .++..+.++++|+.|++++|.+.+ ++..+.++++|+.|+++....
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 5677777777777775 233334467777777777776653 444455555555555553211
Q ss_pred -------------cccCCCCccCCCccCeeecccccccccCC-ccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEE
Q 015202 150 -------------SGAIPTTIGGLKDLQYLFLEYNRLQGSIP-DFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHIN 215 (411)
Q Consensus 150 -------------~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~ 215 (411)
.+.+|..+..+++|+.|++++|.+++... ..+..+++|+.|+++++...+.++.....+++|+.|+
T Consensus 269 ~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp CTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred cccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 12334444555666666666666543222 2345566666666663222222333345566666666
Q ss_pred cc
Q 015202 216 VS 217 (411)
Q Consensus 216 l~ 217 (411)
++
T Consensus 349 L~ 350 (592)
T 3ogk_B 349 IE 350 (592)
T ss_dssp EE
T ss_pred ee
Confidence 66
No 135
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.61 E-value=2.1e-14 Score=135.16 Aligned_cols=226 Identities=12% Similarity=0.066 Sum_probs=150.2
Q ss_pred ccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCcc
Q 015202 6 ISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSC 85 (411)
Q Consensus 6 ~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 85 (411)
++..-+.+|.++ +|+.+.|.++ ++.+...+|.++ +|+.+.+.. .++.+....|.+|++|+.+++.+|.++......
T Consensus 124 i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a 199 (401)
T 4fdw_A 124 VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST 199 (401)
T ss_dssp CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT
T ss_pred cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh
Confidence 333344567665 6888888765 665666777774 688888875 566566677888888888888888887665566
Q ss_pred ccCCccCCeeecccccCCccCcc-ccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccC
Q 015202 86 FGNLTNLRKLYLGSNQLTYIPLT-LWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQ 164 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~~~p~~-~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~ 164 (411)
|. ..+|+.+.+.+ .++.++.. +.++++|+.+.+..+ +.......|.+ .+|+.+.+. +.++.+...+|..+++|+
T Consensus 200 F~-~~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 200 FV-YAGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELA 274 (401)
T ss_dssp TT-TCCCSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCC
T ss_pred Ee-ecccCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCC
Confidence 66 47888888874 36666554 446778888888765 44345556666 677877774 345556677777888888
Q ss_pred eeeccccccc-----ccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccccCCCCCCCCCcccccc
Q 015202 165 YLFLEYNRLQ-----GSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGEIPREGPFRNFSIESF 239 (411)
Q Consensus 165 ~L~l~~n~l~-----~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~~~ 239 (411)
.+.+.+|.+. .+.+.+|.++++|+.+++.+ .++.....+|..+.+|+.+.+..| ++..-.....-..+..+.+
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l 352 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKV 352 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEE
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEE
Confidence 8888777654 35566777888888888873 466566667777788888877554 3332222221114555555
Q ss_pred CCC
Q 015202 240 KGN 242 (411)
Q Consensus 240 ~~n 242 (411)
.+|
T Consensus 353 ~~n 355 (401)
T 4fdw_A 353 EGT 355 (401)
T ss_dssp CCS
T ss_pred cCC
Confidence 554
No 136
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=3e-14 Score=134.00 Aligned_cols=209 Identities=12% Similarity=0.079 Sum_probs=173.3
Q ss_pred ccccCChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCcc
Q 015202 6 ISGSIPEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSC 85 (411)
Q Consensus 6 ~~~~~p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 85 (411)
++..-..+|.++ +|+.+.|.+ .+..+.+.+|.+|++|+.+++++|.++.+....|. +.+|+.+.+.++ +..+...+
T Consensus 146 i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~a 221 (401)
T 4fdw_A 146 LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQA 221 (401)
T ss_dssp CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTT
T ss_pred ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhH
Confidence 444445678775 699999986 77767788999999999999999999877666777 689999999854 77777889
Q ss_pred ccCCccCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeec-----ccCCCCccCC
Q 015202 86 FGNLTNLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFS-----GAIPTTIGGL 160 (411)
Q Consensus 86 ~~~l~~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~-----~~~~~~~~~~ 160 (411)
|.++++|+.+++.++ ++.++...+.-.+|+.+.+.+ .+.......|.++++|+.+++.+|.+. .+.+..|.++
T Consensus 222 F~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c 299 (401)
T 4fdw_A 222 FLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGC 299 (401)
T ss_dssp TTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTC
T ss_pred hhCCCCCCEEecCCC-ccCccccccccCCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCC
Confidence 999999999999974 778877666558999999954 466566788999999999999988775 4677899999
Q ss_pred CccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccCcccc
Q 015202 161 KDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 161 ~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
++|+.+.+. +.++.+...+|.++++|+.+.+.++ ++.....+|..+ +|+.+++.+|.+..
T Consensus 300 ~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 300 PKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp TTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred ccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 999999999 4577677889999999999999655 666777889999 99999999987654
No 137
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=3.5e-14 Score=117.29 Aligned_cols=108 Identities=22% Similarity=0.184 Sum_probs=75.2
Q ss_pred cCCeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccc
Q 015202 91 NLRKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEY 170 (411)
Q Consensus 91 ~L~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~ 170 (411)
..+.+++++|.++.+|..+. ++|+.|++++|.+++..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++
T Consensus 10 ~~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 10 SGTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp ETTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 35677888888887776653 6677777777777766666677777777777777777766666666677777777777
Q ss_pred ccccccCCccccCCCCCCEEeCCCCccccc
Q 015202 171 NRLQGSIPDFIGGLINLKSLDLSNNNLSGA 200 (411)
Q Consensus 171 n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~ 200 (411)
|++++..+..|..+++|+.|++++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 777665555666667777777777766543
No 138
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=4.3e-14 Score=116.76 Aligned_cols=109 Identities=22% Similarity=0.221 Sum_probs=78.9
Q ss_pred CcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCC
Q 015202 115 ILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSN 194 (411)
Q Consensus 115 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 194 (411)
.+.+++++|.++ .+|..+. ++|+.|++++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 466777777776 4555443 6677777777777777777777777777777777777766666677777777777777
Q ss_pred CccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 195 NNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 195 n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
|.+++..+..+..+++|+.|++++|++++.++
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 77776666667777777777777777776654
No 139
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=9.9e-14 Score=114.99 Aligned_cols=105 Identities=21% Similarity=0.155 Sum_probs=73.9
Q ss_pred CeeecccccCCccCccccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccc
Q 015202 93 RKLYLGSNQLTYIPLTLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNR 172 (411)
Q Consensus 93 ~~L~l~~n~l~~~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~ 172 (411)
+.+++++|.++.+|..+. ++|+.|++++|.+.+..|..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 566777777777776553 667777777777776666677777777777777777776666666677777777777777
Q ss_pred ccccCCccccCCCCCCEEeCCCCcccc
Q 015202 173 LQGSIPDFIGGLINLKSLDLSNNNLSG 199 (411)
Q Consensus 173 l~~~~~~~~~~~~~L~~L~l~~n~l~~ 199 (411)
+++..+..|..+++|+.|++++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 775555556777777777777777763
No 140
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.50 E-value=1.3e-15 Score=151.52 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=73.6
Q ss_pred cccCCcCCceeecCcccccccchhhh-CCCCCCeeecccC-ccccc-CchhhhccccCCeeeecCCcccccCCccc----
Q 015202 14 INNLTNLIAIYLGGNKLNGSISIALG-KLQKLQLLGLEDN-QLEGS-IPYDLCRLAALFQLDLGDNKLSGFVPSCF---- 86 (411)
Q Consensus 14 ~~~~~~L~~L~l~~n~~~~~~~~~~~-~l~~L~~L~l~~n-~l~~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---- 86 (411)
+..+++|+.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|++++|.+++..+..+
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 35677888888888888766666665 6888888888887 45432 33444578888888888888765433333
Q ss_pred cCCccCCeeeccccc--CC--ccCccccCCCCCcEEEcCCC
Q 015202 87 GNLTNLRKLYLGSNQ--LT--YIPLTLWNLKYILYLNLSSN 123 (411)
Q Consensus 87 ~~l~~L~~L~l~~n~--l~--~~p~~~~~~~~L~~L~l~~n 123 (411)
..+++|+.|++++|. ++ .++.-+..+++|+.|++++|
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 356688888888776 22 12222234677777777776
No 141
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=1e-13 Score=114.94 Aligned_cols=109 Identities=23% Similarity=0.283 Sum_probs=98.4
Q ss_pred CcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCC
Q 015202 115 ILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSN 194 (411)
Q Consensus 115 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 194 (411)
-+.+++++|.+. .+|..+. ++|+.|++++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999987 6777664 7899999999999998899999999999999999999987777789999999999999
Q ss_pred CccccccchhhhcCCCCCEEEcccCcccccCC
Q 015202 195 NNLSGAIPISLEKLLDLQHINVSFNKLEGEIP 226 (411)
Q Consensus 195 n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~~~ 226 (411)
|.+++..+..+..+++|+.|++++|++.+.++
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 99998777779999999999999999987765
No 142
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.49 E-value=2.6e-15 Score=149.48 Aligned_cols=156 Identities=13% Similarity=0.092 Sum_probs=102.8
Q ss_pred hcccCCcCCceeecCccccc---cc------------chhhhCCCCCCeeecccCcccccCchhhh-ccccCCeeeecCC
Q 015202 13 EINNLTNLIAIYLGGNKLNG---SI------------SIALGKLQKLQLLGLEDNQLEGSIPYDLC-RLAALFQLDLGDN 76 (411)
Q Consensus 13 ~~~~~~~L~~L~l~~n~~~~---~~------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n 76 (411)
.+..+++|+.|+++++.... .. +..+..+++|++|+|++|.+++..+..+. .+++|++|++++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 45778889999999875321 11 22345788999999999988776666665 6889999999988
Q ss_pred -ccccc-CCccccCCccCCeeecccccCCc-----cCccccCCCCCcEEEcCCCe--eee-cCCCCccCccCCCeEEccC
Q 015202 77 -KLSGF-VPSCFGNLTNLRKLYLGSNQLTY-----IPLTLWNLKYILYLNLSSNS--FTI-PLPSEIGNLEVLVQIDLSM 146 (411)
Q Consensus 77 -~l~~~-~~~~~~~l~~L~~L~l~~n~l~~-----~p~~~~~~~~L~~L~l~~n~--l~~-~~~~~~~~l~~L~~L~l~~ 146 (411)
.++.. ++..+..+++|+.|++++|.++. ++.....+++|+.|++++|. +.. .++..+..+++|+.|++++
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~ 220 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNR 220 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCT
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCC
Confidence 44432 33444578899999999888653 22223367789999998886 211 1112224468888888888
Q ss_pred C-eecccCCCCccCCCccCeeecc
Q 015202 147 N-NFSGAIPTTIGGLKDLQYLFLE 169 (411)
Q Consensus 147 n-~~~~~~~~~~~~~~~L~~L~l~ 169 (411)
| .+.+ ++..+..+++|+.|++.
T Consensus 221 ~~~~~~-l~~~~~~~~~L~~L~l~ 243 (594)
T 2p1m_B 221 AVPLEK-LATLLQRAPQLEELGTG 243 (594)
T ss_dssp TSCHHH-HHHHHHHCTTCSEEECS
T ss_pred CCcHHH-HHHHHhcCCcceEcccc
Confidence 7 3332 44444555566666543
No 143
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.40 E-value=8.8e-15 Score=136.36 Aligned_cols=169 Identities=21% Similarity=0.149 Sum_probs=118.7
Q ss_pred CCCCCCeeecccCcccccCchhhhcc-----ccCCeeeecCCcccccCCccc-cCCccCCeeecccccCCcc-----Ccc
Q 015202 40 KLQKLQLLGLEDNQLEGSIPYDLCRL-----AALFQLDLGDNKLSGFVPSCF-GNLTNLRKLYLGSNQLTYI-----PLT 108 (411)
Q Consensus 40 ~l~~L~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~-----p~~ 108 (411)
-+++|+.|+|++|.++......+..+ ++|++|+|++|.++......+ ..+++|+.|+|++|.++.. ...
T Consensus 70 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~ 149 (372)
T 3un9_A 70 VLSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDL 149 (372)
T ss_dssp HHTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHH
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHH
Confidence 34678888888888875544444433 688888888888764332333 3457888889998888732 222
Q ss_pred c-cCCCCCcEEEcCCCeeeec----CCCCccCccCCCeEEccCCeecccC----CCCccCCCccCeeeccccccccc---
Q 015202 109 L-WNLKYILYLNLSSNSFTIP----LPSEIGNLEVLVQIDLSMNNFSGAI----PTTIGGLKDLQYLFLEYNRLQGS--- 176 (411)
Q Consensus 109 ~-~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~~~~~~----~~~~~~~~~L~~L~l~~n~l~~~--- 176 (411)
+ ...++|++|++++|.++.. ++..+...++|++|+|++|.++... ...+...++|+.|+|++|.+++.
T Consensus 150 L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~ 229 (372)
T 3un9_A 150 LLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAAL 229 (372)
T ss_dssp HHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHH
T ss_pred HHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHH
Confidence 2 2467899999999988642 3344567788999999999887532 44556678999999999998753
Q ss_pred -CCccccCCCCCCEEeCCCCccccccchhhhcC
Q 015202 177 -IPDFIGGLINLKSLDLSNNNLSGAIPISLEKL 208 (411)
Q Consensus 177 -~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 208 (411)
+...+...++|++|++++|.+++.....+..+
T Consensus 230 ~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 230 ALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 23344567899999999999986655555443
No 144
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.38 E-value=2.2e-13 Score=124.46 Aligned_cols=83 Identities=19% Similarity=0.150 Sum_probs=66.6
Q ss_pred cCCeeeccCCceEEEEEec------CCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 328 ANNIIGRGGIGSIYKARIQ------DGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~------~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
-.++||+|+||.||+|++. +++.||||+++..+....++|.+|+++|++
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3478999999999999974 467899999977666667899999999998
Q ss_pred -------cccCCCC------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -------ANLLTRE------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -------~~l~~~~------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++++... ...+++|.++++|+.|||+||+|||+.
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~ 177 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL 177 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3333211 123599999999999999999999964
No 145
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.38 E-value=1.2e-14 Score=135.45 Aligned_cols=159 Identities=19% Similarity=0.192 Sum_probs=117.2
Q ss_pred cccCCeeeecCCcccccCCccccC-----CccCCeeecccccCCcc-Cccc-cCCCCCcEEEcCCCeeeecCCCCc----
Q 015202 65 LAALFQLDLGDNKLSGFVPSCFGN-----LTNLRKLYLGSNQLTYI-PLTL-WNLKYILYLNLSSNSFTIPLPSEI---- 133 (411)
Q Consensus 65 l~~L~~L~l~~n~l~~~~~~~~~~-----l~~L~~L~l~~n~l~~~-p~~~-~~~~~L~~L~l~~n~l~~~~~~~~---- 133 (411)
+++|++|+|++|.++......+.. .++|+.|+|++|.++.. ...+ ..+++|+.|++++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 568999999999987543333333 26899999999998732 1122 245679999999999875433333
Q ss_pred -cCccCCCeEEccCCeeccc----CCCCccCCCccCeeeccccccccc----CCccccCCCCCCEEeCCCCccccc----
Q 015202 134 -GNLEVLVQIDLSMNNFSGA----IPTTIGGLKDLQYLFLEYNRLQGS----IPDFIGGLINLKSLDLSNNNLSGA---- 200 (411)
Q Consensus 134 -~~l~~L~~L~l~~n~~~~~----~~~~~~~~~~L~~L~l~~n~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~---- 200 (411)
...++|+.|+|++|.++.. ++..+..+++|++|+|++|.+++. ++..+...++|+.|++++|.+++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~ 230 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALA 230 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHH
Confidence 2457899999999998753 334446788999999999998752 245566778999999999999753
Q ss_pred cchhhhcCCCCCEEEcccCcccc
Q 015202 201 IPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 201 ~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
+...+...++|+.|++++|.++.
T Consensus 231 l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 231 LARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHHhCCCCCEEeccCCCCCH
Confidence 34455667899999999998864
No 146
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.38 E-value=7.1e-14 Score=126.43 Aligned_cols=81 Identities=21% Similarity=0.241 Sum_probs=62.7
Q ss_pred CeeeccCCceEEEEEec------CCCEEEEEEEeccc-chhhHhHHHHHHHHHH--------------------------
Q 015202 330 NIIGRGGIGSIYKARIQ------DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~------~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-------------------------- 376 (411)
+.||+|+||.||+|++. +++.||||+++... ....++|.+|+.++++
T Consensus 32 ~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~ 111 (308)
T 4gt4_A 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYC 111 (308)
T ss_dssp EEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred eEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcC
Confidence 68999999999999983 45789999996443 3345789999999998
Q ss_pred ------cccCCCC-------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTRE-------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~~-------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++|+.+. ....++|.++++||.|||+||+|||+.
T Consensus 112 ~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~ 164 (308)
T 4gt4_A 112 SHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH 164 (308)
T ss_dssp SSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3443221 013499999999999999999999974
No 147
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=1e-12 Score=121.64 Aligned_cols=102 Identities=20% Similarity=0.170 Sum_probs=61.2
Q ss_pred eecccc-cCCccCccccCCCCCcEEEcCC-CeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeeccccc
Q 015202 95 LYLGSN-QLTYIPLTLWNLKYILYLNLSS-NSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNR 172 (411)
Q Consensus 95 L~l~~n-~l~~~p~~~~~~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~ 172 (411)
++.+++ +++.+|. +..+++|+.|+|++ |.+.+..+..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|+
T Consensus 13 v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 91 (347)
T 2ifg_A 13 LRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNA 91 (347)
T ss_dssp EECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSC
T ss_pred EEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCc
Confidence 455554 5555665 55555666666654 66655555556666666666666666666666666666666666666666
Q ss_pred ccccCCccccCCCCCCEEeCCCCccc
Q 015202 173 LQGSIPDFIGGLINLKSLDLSNNNLS 198 (411)
Q Consensus 173 l~~~~~~~~~~~~~L~~L~l~~n~l~ 198 (411)
+++..+..+..++ |+.|++.+|.+.
T Consensus 92 l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 92 LESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6655444444444 666666666665
No 148
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.36 E-value=2.5e-13 Score=122.29 Aligned_cols=82 Identities=21% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCeeeccCCceEEEEEec------CCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------
Q 015202 329 NNIIGRGGIGSIYKARIQ------DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~------~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------- 376 (411)
.+.||+|+||.||+|++. +|..||||+++..+....++|.+|++++++
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 478999999999999873 467899999977666667899999999998
Q ss_pred ------cccCCC----------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTR----------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~----------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++|+.. .....++|.++++||.|||+||+|||++
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~ 147 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ 147 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 223221 1124599999999999999999999974
No 149
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=1.4e-12 Score=120.71 Aligned_cols=103 Identities=22% Similarity=0.199 Sum_probs=79.9
Q ss_pred ceeecCc-ccccccchhhhCCCCCCeeeccc-CcccccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeeccc
Q 015202 22 AIYLGGN-KLNGSISIALGKLQKLQLLGLED-NQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGS 99 (411)
Q Consensus 22 ~L~l~~n-~~~~~~~~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 99 (411)
.++.+++ +++. +|. +..+++|++|+|++ |.+++..+..|.++++|++|+|++|++++..|..|..+++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5677776 6763 555 77888888888885 888877777788888888888888888877777788888888888888
Q ss_pred ccCCccCccccCCCCCcEEEcCCCeee
Q 015202 100 NQLTYIPLTLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 100 n~l~~~p~~~~~~~~L~~L~l~~n~l~ 126 (411)
|+++.+|..++....|+.|++.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCcc
Confidence 888888776665445888888888776
No 150
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.24 E-value=6.4e-12 Score=113.23 Aligned_cols=83 Identities=20% Similarity=0.277 Sum_probs=64.0
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecc--cchhhHhHHHHHHHHHH----------------------cccCC
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD----------------------ANLLT 381 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~----------------------~~l~~ 381 (411)
+.-.+.||+|+||.||+|++.+ .||||.++.. .....++|.+|++++++ +|..+
T Consensus 38 l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~g 115 (307)
T 3omv_A 38 VMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEG 115 (307)
T ss_dssp CCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSS
T ss_pred eEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcCCC
Confidence 3344789999999999999853 6999998543 23446789999999998 33322
Q ss_pred CC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+ ...+++|.++++||.|||+||+|||+.
T Consensus 116 GsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~ 151 (307)
T 3omv_A 116 SSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 151 (307)
T ss_dssp CBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 21 124599999999999999999999974
No 151
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.16 E-value=2.3e-11 Score=110.00 Aligned_cols=78 Identities=22% Similarity=0.284 Sum_probs=57.0
Q ss_pred CCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHH--HHHHHHHH---------------------------ccc
Q 015202 329 NNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFD--NEFMTVVD---------------------------ANL 379 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~--~e~~~~~~---------------------------~~l 379 (411)
.+.||+|+||.||+|++ +|+.||||+++... .++|. .|+..+.+ +|.
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~ 83 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYH 83 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCC
Confidence 37899999999999999 68999999995432 33444 44544443 222
Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.+ ...+++|.++++|+.|+|+||+|||++
T Consensus 84 ~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~ 119 (303)
T 3hmm_A 84 EHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp TTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 123599999999999999999999974
No 152
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.13 E-value=9.5e-11 Score=106.32 Aligned_cols=100 Identities=24% Similarity=0.352 Sum_probs=80.2
Q ss_pred ccccccHHHHHHHhcCCCcC------CeeeccCCceEEEEEecCCCEEEEEEEeccc----chhhHhHHHHHHHHHH---
Q 015202 310 NQRRFTYLELFHATNGFSAN------NIIGRGGIGSIYKARIQDGMEVAVKVFDLQY----REAFKSFDNEFMTVVD--- 376 (411)
Q Consensus 310 ~~~~~~~~~l~~at~~f~~~------~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~----~~~~~~f~~e~~~~~~--- 376 (411)
....|++.++..+|++|+.. +.||+|+||.||+|.. ++..||||++.... ....+.|.+|+.++.+
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 45689999999999999987 8999999999999997 67899999985422 2335779999999987
Q ss_pred --------------------ccc---------CCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------------------ANL---------LTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------------------~~l---------~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. .......+++|..+.+|+.++|+||+|||+.
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 152 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 222 1111234599999999999999999999964
No 153
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.11 E-value=2.3e-11 Score=111.93 Aligned_cols=94 Identities=18% Similarity=0.286 Sum_probs=68.8
Q ss_pred HHHHHHhcCCCcCCeeeccCCceEEEEEecC------CCEEEEEEEecccc-hhhHhHHHHHHHHHH-------------
Q 015202 317 LELFHATNGFSANNIIGRGGIGSIYKARIQD------GMEVAVKVFDLQYR-EAFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 317 ~~l~~at~~f~~~~~lg~g~~g~vy~g~l~~------~~~vavk~l~~~~~-~~~~~f~~e~~~~~~------------- 376 (411)
.+++...++|.-.+.||+|+||.||+|.+.+ ++.||||++..... ...++|.+|++++.+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 3333344555556889999999999998732 35799999965443 345789999999987
Q ss_pred ---------------------cccCCCC-------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------------------ANLLTRE-------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------------------~~l~~~~-------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++|+... ....++|.+++.||.|||+||+|||+.
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~ 204 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 204 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC
Confidence 2332111 123489999999999999999999964
No 154
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.09 E-value=3.9e-11 Score=109.72 Aligned_cols=98 Identities=27% Similarity=0.370 Sum_probs=77.8
Q ss_pred cccHHHHHHHhcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------
Q 015202 313 RFTYLELFHATNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------- 376 (411)
Q Consensus 313 ~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------- 376 (411)
.+.+.++..++++|...+.||+|+||.||+|+..+|..||||++........+.|.+|++++.+
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 3444556678889999999999999999999998899999999876665667889999999886
Q ss_pred ----------------cccCCCC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------------ANLLTRE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------------~~l~~~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.... ....++|.++.+|+.++++||+|||+.
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 158 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR 158 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC
Confidence 2222221 123499999999999999999999963
No 155
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.08 E-value=2.9e-09 Score=100.16 Aligned_cols=198 Identities=11% Similarity=0.083 Sum_probs=99.3
Q ss_pred hhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCcc
Q 015202 12 EEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTN 91 (411)
Q Consensus 12 ~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 91 (411)
.+|.++.+|+.+.+.++- ..+....|.++.+|+.+++..+ ++.+....|.++..|+.+.+..+... +...+....+
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~ 231 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTG 231 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCC
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCC
Confidence 345666666666665443 2244456666666666666655 33344445566666666555443221 1111122233
Q ss_pred CCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCC---------------------CCccCccCCCeEEccCCee
Q 015202 92 LRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLP---------------------SEIGNLEVLVQIDLSMNNF 149 (411)
Q Consensus 92 L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~---------------------~~~~~l~~L~~L~l~~n~~ 149 (411)
|+.+.+... ++.+.. .+..+..|+.+.+..+... ... ..|..+.+|+.+.+..+ +
T Consensus 232 l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i 308 (394)
T 4fs7_A 232 VKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-V 308 (394)
T ss_dssp CCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-C
T ss_pred CceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccc-c
Confidence 444443321 222221 2334555555555444322 222 33445555665555543 3
Q ss_pred cccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEccc
Q 015202 150 SGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSF 218 (411)
Q Consensus 150 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~ 218 (411)
+.+...+|..+.+|+.+++.++ ++.+-..+|.++.+|+.+++..+ ++.....+|..+.+|+.+++..
T Consensus 309 ~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 309 KFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred ceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 3344555666666666666533 44344556666666666666544 4444455566666666666543
No 156
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.06 E-value=1.7e-10 Score=103.07 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=63.3
Q ss_pred CeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH---------------------------ccc
Q 015202 330 NIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD---------------------------ANL 379 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~---------------------------~~l 379 (411)
.+||+|+||.||+|.. ..+..||||++.... ....+.|.+|++++++ +|.
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~ 111 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCC
Confidence 5799999999999987 457899999995432 3345779999999997 222
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.+ ...++++.....|+.|||+||+|||++
T Consensus 112 ~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~ 148 (290)
T 3fpq_A 112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR 148 (290)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222 123589999999999999999999974
No 157
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.06 E-value=7.5e-11 Score=107.99 Aligned_cols=101 Identities=29% Similarity=0.394 Sum_probs=80.8
Q ss_pred ccccccHHHHHHHhcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccc-hhhHhHHHHHHHHHH------------
Q 015202 310 NQRRFTYLELFHATNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD------------ 376 (411)
Q Consensus 310 ~~~~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~------------ 376 (411)
....+++.++..++++|...+.||+|+||.||+|...+|+.||||++..... .....|.+|++++..
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 4567899999999999999999999999999999988899999999854432 233479999999886
Q ss_pred -----------cc---------cCCCC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----------AN---------LLTRE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----------~~---------l~~~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++ ++... ...+++|..+..|+.++|+||+|||+.
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 150 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDH 150 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22 22222 223599999999999999999999974
No 158
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.04 E-value=3e-10 Score=103.76 Aligned_cols=100 Identities=21% Similarity=0.182 Sum_probs=78.3
Q ss_pred cccccHHHHHHHhcC----------CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH---
Q 015202 311 QRRFTYLELFHATNG----------FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD--- 376 (411)
Q Consensus 311 ~~~~~~~~l~~at~~----------f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--- 376 (411)
...+++++++.+++. |...+.||+|+||.||+|... +|+.||||++........+.|.+|+.++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 22 SGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp ---CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCC
T ss_pred CCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCC
Confidence 357899999999976 334468999999999999985 689999999976666666789999999987
Q ss_pred --------------------cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------------------ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------------------~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ....++|..+..|+.++++||+|||+.
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~ 160 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ 160 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332221 223589999999999999999999963
No 159
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.04 E-value=1.2e-10 Score=106.45 Aligned_cols=85 Identities=24% Similarity=0.243 Sum_probs=67.6
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCC
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLT 381 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~ 381 (411)
|...+.||+|+||.||+|+. .+|+.||||+++.......+.|.+|++++.+ +|..+
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 44557899999999999987 4689999999976555556789999999998 33332
Q ss_pred CC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. ....+++.+...|+.+|++||+|||++
T Consensus 156 g~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~ 189 (346)
T 4fih_A 156 GALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 189 (346)
T ss_dssp EEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 21 123489999999999999999999974
No 160
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.02 E-value=3e-11 Score=111.58 Aligned_cols=180 Identities=17% Similarity=0.141 Sum_probs=109.3
Q ss_pred hhhhCCCCCCeeecccCccc---------ccCchhhhccccCCeeeecCCcccccCCccccCCccCCeeecccccCCc-c
Q 015202 36 IALGKLQKLQLLGLEDNQLE---------GSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLTNLRKLYLGSNQLTY-I 105 (411)
Q Consensus 36 ~~~~~l~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~ 105 (411)
.+...+++|+.|.+..+... +.+...+..+|+|+.|+|++|.-. .++. +. +++|+.|++..+.++. .
T Consensus 133 ~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~ 209 (362)
T 2ra8_A 133 ENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSV 209 (362)
T ss_dssp TTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHH
T ss_pred HhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHH
Confidence 34556677777777544221 123344566778888888776311 1222 33 6788888888777652 1
Q ss_pred Ccccc--CCCCCcEEEcCC--Ceeeec-----CCCCc--cCccCCCeEEccCCeecccCCCCc---cCCCccCeeecccc
Q 015202 106 PLTLW--NLKYILYLNLSS--NSFTIP-----LPSEI--GNLEVLVQIDLSMNNFSGAIPTTI---GGLKDLQYLFLEYN 171 (411)
Q Consensus 106 p~~~~--~~~~L~~L~l~~--n~l~~~-----~~~~~--~~l~~L~~L~l~~n~~~~~~~~~~---~~~~~L~~L~l~~n 171 (411)
...+. .+++|+.|+|+. |...+. +...+ ..+++|+.|++.+|.+.+..+..+ ..+++|+.|+|+.|
T Consensus 210 l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 210 VEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp HHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred HHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 12232 578888887742 211111 11112 246789999998888764332222 24789999999999
Q ss_pred ccccc----CCccccCCCCCCEEeCCCCccccccchhhhc-CCCCCEEEcccCc
Q 015202 172 RLQGS----IPDFIGGLINLKSLDLSNNNLSGAIPISLEK-LLDLQHINVSFNK 220 (411)
Q Consensus 172 ~l~~~----~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~l~l~~n~ 220 (411)
.+++. ++..+..+++|+.|++++|.++...-..+.. + ...++++.+.
T Consensus 290 ~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 290 VLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 88753 2333456789999999999887554444443 2 3567888776
No 161
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.01 E-value=1.5e-08 Score=95.26 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=17.2
Q ss_pred hcccCC-cCCceeecCcccccccchhhhCCCCCCeeeccc
Q 015202 13 EINNLT-NLIAIYLGGNKLNGSISIALGKLQKLQLLGLED 51 (411)
Q Consensus 13 ~~~~~~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 51 (411)
+|.++. .|+.+.|..+ ++.+-..+|.+|++|+.+.+..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~ 96 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQD 96 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGG
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecC
Confidence 344442 3555555432 3333344455555555555443
No 162
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=99.00 E-value=1.8e-10 Score=106.35 Aligned_cols=180 Identities=17% Similarity=0.201 Sum_probs=119.5
Q ss_pred CCCCeeecccCcccc-c-------CchhhhccccCCeeeecCCccc---------ccCCccccCCccCCeeecccccCCc
Q 015202 42 QKLQLLGLEDNQLEG-S-------IPYDLCRLAALFQLDLGDNKLS---------GFVPSCFGNLTNLRKLYLGSNQLTY 104 (411)
Q Consensus 42 ~~L~~L~l~~n~l~~-~-------~~~~~~~l~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~l~~n~l~~ 104 (411)
..++.|.+......+ . +..+...+++|+.|.+.++... +.++..+..+|+|+.|++++|.-..
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 456777777554431 1 1233456889999998765321 1233445778999999999874234
Q ss_pred cCccccCCCCCcEEEcCCCeeeecCCCCcc--CccCCCeEEccC--Ceeccc-----CCCCc--cCCCccCeeecccccc
Q 015202 105 IPLTLWNLKYILYLNLSSNSFTIPLPSEIG--NLEVLVQIDLSM--NNFSGA-----IPTTI--GGLKDLQYLFLEYNRL 173 (411)
Q Consensus 105 ~p~~~~~~~~L~~L~l~~n~l~~~~~~~~~--~l~~L~~L~l~~--n~~~~~-----~~~~~--~~~~~L~~L~l~~n~l 173 (411)
++. + .+++|+.|++..|.+.......+. .+++|+.|+|+. |...+. +...+ ..+++|+.|++.+|.+
T Consensus 187 l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i 264 (362)
T 2ra8_A 187 IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE 264 (362)
T ss_dssp CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT
T ss_pred ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC
Confidence 554 3 388999999998877643333343 688999999863 221111 01112 3578999999999988
Q ss_pred cccCCccc---cCCCCCCEEeCCCCccccc----cchhhhcCCCCCEEEcccCcccc
Q 015202 174 QGSIPDFI---GGLINLKSLDLSNNNLSGA----IPISLEKLLDLQHINVSFNKLEG 223 (411)
Q Consensus 174 ~~~~~~~~---~~~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~l~l~~n~l~~ 223 (411)
.+..+..+ ..+++|++|+++.|.+.+. ++..+..+++|+.|++++|.++.
T Consensus 265 ~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 265 QNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp HHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred chHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 75332222 2578999999999999764 33444678999999999998763
No 163
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=98.99 E-value=2e-10 Score=103.45 Aligned_cols=86 Identities=17% Similarity=0.235 Sum_probs=61.6
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc-hhhHhHHHHHHHHHH--------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~-------------------------- 376 (411)
+|...+.||+|+||.||+|+. .+|+.||||++..... ...+.|.+|++++++
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 455668999999999999986 4689999999964433 335679999999997
Q ss_pred ---------cccCCCC---------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------ANLLTRE---------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------~~l~~~~---------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. .....+|.....|+.||++||+|||++
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~ 137 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK 137 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC
Confidence 1111111 112256777789999999999999974
No 164
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=98.99 E-value=2.8e-10 Score=106.65 Aligned_cols=86 Identities=23% Similarity=0.225 Sum_probs=68.5
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|...+.||+|+||.||+|.. .+|+.||||++........+.|.+|+++|.+ +|+.
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~ 231 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE 231 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCC
Confidence 355567899999999999987 4689999999976655556789999999998 3333
Q ss_pred CCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++.+...|+.+|++||+|||++
T Consensus 232 gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~ 266 (423)
T 4fie_A 232 GGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ 266 (423)
T ss_dssp TEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 221 123489999999999999999999974
No 165
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=98.96 E-value=6.4e-10 Score=101.73 Aligned_cols=86 Identities=10% Similarity=0.204 Sum_probs=60.4
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------cc
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
+|.-.+.||+|+||.||+|+. .+|+.||||++.... ....+.|.+|++++++ +|
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 344557899999999999986 568999999995432 3345789999999998 43
Q ss_pred cCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.+ ++..+++.+...|+.||++||+|||++
T Consensus 105 ~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~ 144 (350)
T 4b9d_A 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144 (350)
T ss_dssp CTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 33222 123478888899999999999999974
No 166
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.86 E-value=2.5e-08 Score=93.76 Aligned_cols=195 Identities=17% Similarity=0.176 Sum_probs=128.4
Q ss_pred ChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccccCCc
Q 015202 11 PEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCFGNLT 90 (411)
Q Consensus 11 p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 90 (411)
...|.++.+|+.+.+..+ ++.+...+|.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++......+..+.
T Consensus 178 ~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~ 253 (394)
T 4fs7_A 178 NGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCT 253 (394)
T ss_dssp TTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCS
T ss_pred cccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccc
Confidence 346788899999999776 55566678888888888887765322 1122222344555544322 2222233344444
Q ss_pred cCCeeecccccCC--------------------ccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCee
Q 015202 91 NLRKLYLGSNQLT--------------------YIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNF 149 (411)
Q Consensus 91 ~L~~L~l~~n~l~--------------------~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 149 (411)
.|+.+.+..+... .++. .+..+.+|+.+.+..+ +.......|.++.+|+.+++..+ +
T Consensus 254 ~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v 331 (394)
T 4fs7_A 254 DLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-V 331 (394)
T ss_dssp SCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-C
T ss_pred cceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-c
Confidence 4444444332111 1222 3457888999988765 55456678999999999999865 6
Q ss_pred cccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEE
Q 015202 150 SGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHI 214 (411)
Q Consensus 150 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l 214 (411)
+.+...+|.++.+|+.+.+..+ ++.+-..+|.++++|+.+++..+ +. .....|..+++|+.+
T Consensus 332 ~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 332 EEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp CEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred cEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 6677889999999999999877 76677889999999999999754 33 234566666666543
No 167
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.83 E-value=2.4e-07 Score=86.96 Aligned_cols=204 Identities=13% Similarity=0.142 Sum_probs=109.0
Q ss_pred ChhcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecCCcccccCCccc----
Q 015202 11 PEEINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLSGFVPSCF---- 86 (411)
Q Consensus 11 p~~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---- 86 (411)
..+|.++.+|+.+.+..+ ++.+...+|.++.+|+.+.+..+ +..+....|..+.+|+.+.+.++ +..+....|
T Consensus 107 ~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~ 183 (394)
T 4gt6_A 107 RQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTA 183 (394)
T ss_dssp TTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCC
T ss_pred hhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccccc
Confidence 345777777777776654 44355566777777777777654 23244445666666666666543 222222233
Q ss_pred ------------------cCCccCCeeecccccCC-----------------------------ccCc--------cccC
Q 015202 87 ------------------GNLTNLRKLYLGSNQLT-----------------------------YIPL--------TLWN 111 (411)
Q Consensus 87 ------------------~~l~~L~~L~l~~n~l~-----------------------------~~p~--------~~~~ 111 (411)
..+.++.......+... .+|. .+..
T Consensus 184 l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~ 263 (394)
T 4gt6_A 184 LTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDS 263 (394)
T ss_dssp CSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTT
T ss_pred eeEEEECCcccccccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeee
Confidence 33333333322211111 1111 2234
Q ss_pred CCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEe
Q 015202 112 LKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLD 191 (411)
Q Consensus 112 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~ 191 (411)
+..|+.+.+..+... .....|.++..|+.+.+.. .++.+...+|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+.
T Consensus 264 c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 264 CAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp CSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 555555555544322 3344555666666666643 333355566666666777666543 4434455666666777776
Q ss_pred CCCCccccccchhhhcCCCCCEEEcccCcc
Q 015202 192 LSNNNLSGAIPISLEKLLDLQHINVSFNKL 221 (411)
Q Consensus 192 l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l 221 (411)
+..+ ++.....+|..+.+|+.+++.++..
T Consensus 341 ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 341 IPSS-VTKIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp ECTT-CCBCCGGGGTTCTTCCEEEESSCHH
T ss_pred ECcc-cCEEhHhHhhCCCCCCEEEECCcee
Confidence 6543 4445555666667777776665543
No 168
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=98.82 E-value=2.4e-09 Score=94.80 Aligned_cols=86 Identities=14% Similarity=0.208 Sum_probs=62.3
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++.... ......|.+|++++.+
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 4566668999999999999986 468999999995432 2224679999999997
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|.. .. ...+++..+...++.||+.||+|||++
T Consensus 93 Ey~~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~ 131 (275)
T 3hyh_A 93 EYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131 (275)
T ss_dssp ECCC-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3321 11 123589999999999999999999974
No 169
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=98.80 E-value=5.3e-09 Score=94.87 Aligned_cols=86 Identities=17% Similarity=0.158 Sum_probs=68.2
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
+|...+.||+|+||.||+|+. .+|..||||++........+.|.+|++++.+ +|..
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 90 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence 344558999999999999997 4588999999966555667889999999987 3332
Q ss_pred CCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....++|.++.+|+.++|+||+|||+.
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 127 (310)
T 3s95_A 91 GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127 (310)
T ss_dssp TCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 211 134599999999999999999999964
No 170
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=98.80 E-value=4e-09 Score=98.75 Aligned_cols=86 Identities=19% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------------------- 376 (411)
+|.-.+.||+|+||.||+|.. ..|+.||||++.... ....+.+.+|+++|.+
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 344557999999999999986 568999999995432 2335679999999997
Q ss_pred ----cccCCC-----CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTR-----EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~-----~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+. ....++++.+...|+.||++||+|||++
T Consensus 135 ~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~ 177 (398)
T 4b99_A 135 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA 177 (398)
T ss_dssp EEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0134599999999999999999999974
No 171
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=98.79 E-value=2.3e-09 Score=97.62 Aligned_cols=81 Identities=15% Similarity=0.183 Sum_probs=62.2
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|...+.||+|+||.||+|+. ..|+.||||+++... .+.+|+.++++ +|+.
T Consensus 59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred heEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 344456899999999999987 468999999996432 23579998887 4443
Q ss_pred CCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.+ ...++++.+...|+.||++||+|||++
T Consensus 134 gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 169 (336)
T 4g3f_A 134 GGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169 (336)
T ss_dssp TCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 322 123599999999999999999999985
No 172
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.79 E-value=1.5e-09 Score=90.65 Aligned_cols=115 Identities=10% Similarity=0.074 Sum_probs=59.6
Q ss_pred hhhhCCCCCCeeecccC-ccccc----CchhhhccccCCeeeecCCccccc----CCccccCCccCCeeecccccCCc--
Q 015202 36 IALGKLQKLQLLGLEDN-QLEGS----IPYDLCRLAALFQLDLGDNKLSGF----VPSCFGNLTNLRKLYLGSNQLTY-- 104 (411)
Q Consensus 36 ~~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~-- 104 (411)
..+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|+.|+|++|.++.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g 109 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG 109 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH
Confidence 34455555666666655 55422 222333445566666666655421 22233334556666666666652
Q ss_pred ---cCccccCCCCCcEEEc--CCCeeeec----CCCCccCccCCCeEEccCCeec
Q 015202 105 ---IPLTLWNLKYILYLNL--SSNSFTIP----LPSEIGNLEVLVQIDLSMNNFS 150 (411)
Q Consensus 105 ---~p~~~~~~~~L~~L~l--~~n~l~~~----~~~~~~~l~~L~~L~l~~n~~~ 150 (411)
+...+...++|++|++ ++|.+... +...+...++|+.|++++|.+.
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3444555566666666 55665532 2223334466777777777654
No 173
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=98.77 E-value=5.3e-09 Score=97.52 Aligned_cols=87 Identities=18% Similarity=0.274 Sum_probs=66.1
Q ss_pred cCCCcCCeeeccCCceEEEEEec----CCCEEEEEEEeccc-chhhHhHHHHHHHHHH----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ----DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~----~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~---------------------- 376 (411)
++|...+.||+|+||.||+|+.. ++..||||++.... ....++|.+|+.++.+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 34566789999999999999874 46789999996543 3345789999999987
Q ss_pred -cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. .+..++|.++.+|+.+||+||+|||+.
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 166 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM 166 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123599999999999999999999964
No 174
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=98.77 E-value=1.1e-08 Score=93.47 Aligned_cols=98 Identities=21% Similarity=0.238 Sum_probs=63.9
Q ss_pred cccHHHHHHHhcCCCc---------CCeeeccCCceEEEEEec----CCCEEEEEEEeccc-chhhHhHHHHHHHHHH--
Q 015202 313 RFTYLELFHATNGFSA---------NNIIGRGGIGSIYKARIQ----DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-- 376 (411)
Q Consensus 313 ~~~~~~l~~at~~f~~---------~~~lg~g~~g~vy~g~l~----~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-- 376 (411)
..++.+...++..|.. .+.||+|+||.||+|... .+..||||++.... ....+.|.+|++++.+
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~ 108 (325)
T 3kul_A 29 PHTYEEPGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD 108 (325)
T ss_dssp --------------CCBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC
T ss_pred cccccCccccchhhccccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 3445555555555543 378999999999999983 34569999996543 3345789999999987
Q ss_pred ---------------------cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------------------ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------------------~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....++|.++..|+.++++||+|||+.
T Consensus 109 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 170 (325)
T 3kul_A 109 HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL 170 (325)
T ss_dssp CTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123599999999999999999999964
No 175
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=98.74 E-value=3.2e-09 Score=95.49 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=65.6
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|+. .+|+.||||.+.... ....+.+.+|++++.+ +
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 455568999999999999986 568999999995432 2335679999999997 3
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.+ ....++..+-..++.||+.||+|||++
T Consensus 113 y~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~ 151 (311)
T 4aw0_A 113 YAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151 (311)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 332211 123588888889999999999999974
No 176
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.74 E-value=3.2e-07 Score=85.64 Aligned_cols=106 Identities=13% Similarity=0.101 Sum_probs=73.6
Q ss_pred CCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccCCCccCeeecccccccccCCccccCCCCCCEE
Q 015202 111 NLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSL 190 (411)
Q Consensus 111 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L 190 (411)
.+.+|+.+.+..+ +.......|.++..|+.+.+..+ ++.+....|..+.+|+.+.+..+ ++.....+|.++++|+.+
T Consensus 215 ~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i 291 (379)
T 4h09_A 215 YGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKV 291 (379)
T ss_dssp TCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEE
T ss_pred cccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccc
Confidence 4566777777654 33345566777788888888766 44456677777788888877654 444555677788888888
Q ss_pred eCCCCccccccchhhhcCCCCCEEEcccC
Q 015202 191 DLSNNNLSGAIPISLEKLLDLQHINVSFN 219 (411)
Q Consensus 191 ~l~~n~l~~~~~~~~~~l~~L~~l~l~~n 219 (411)
.+.++.++.....+|..+.+|+.+.+..+
T Consensus 292 ~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 292 VMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred cccccccceehhhhhcCCCCCCEEEcCcc
Confidence 88777777666677778888888877543
No 177
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=98.74 E-value=3.8e-09 Score=95.85 Aligned_cols=86 Identities=21% Similarity=0.303 Sum_probs=65.5
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
++|.-.+.||+|+||.||+|.. +|..||||++.... ....++|.+|++++.+ +|
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 115 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEY 115 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEEC
T ss_pred hHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEec
Confidence 3455558999999999999988 67899999985433 2335689999999997 22
Q ss_pred cCCCC------CC---CCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DK---HFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~---~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. .. ..+++..+..|+.++++||+|||+.
T Consensus 116 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (309)
T 3p86_A 116 LSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156 (309)
T ss_dssp CTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 22211 11 1389999999999999999999974
No 178
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=98.71 E-value=1.1e-08 Score=91.98 Aligned_cols=84 Identities=18% Similarity=0.244 Sum_probs=65.5
Q ss_pred CcCCeeeccCCceEEEEEe-----cCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 327 SANNIIGRGGIGSIYKARI-----QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 327 ~~~~~lg~g~~g~vy~g~l-----~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
.-.+.||+|+||.||+|++ .+|+.||||++........+.|.+|++++.+
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 92 (295)
T 3ugc_A 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92 (295)
T ss_dssp EEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEE
T ss_pred hhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEE
Confidence 3447899999999999986 3578899999976655566789999999987
Q ss_pred cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....++|.++.+|+.++++||+|||+.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 133 (295)
T 3ugc_A 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133 (295)
T ss_dssp ECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 2222211 122489999999999999999999963
No 179
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=98.70 E-value=8.9e-09 Score=91.27 Aligned_cols=84 Identities=15% Similarity=0.235 Sum_probs=64.2
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-------------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-------------------------~~ 378 (411)
|.-.+.||+|+||.||+|+. +|..||||++.... ....+.|.+|+.++.+ ++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (271)
T 3kmu_A 12 LNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHW 90 (271)
T ss_dssp CEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEEC
T ss_pred hHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecc
Confidence 44458999999999999998 57899999995432 3345679999998886 12
Q ss_pred cCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ...+++|.++..|+.++++||+|||+.
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 91 MPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp CTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred cCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 21111 122489999999999999999999973
No 180
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=98.70 E-value=2.5e-09 Score=97.13 Aligned_cols=87 Identities=15% Similarity=0.083 Sum_probs=63.2
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------------------ 376 (411)
++|...++||+|+||.||+|... +|+.||||++.... ......+..|+..+.+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 35666789999999999999985 68999999985432 2334556667766654
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. .+..++|..+.+|+.++|+||+|||+.
T Consensus 137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 176 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ 176 (311)
T ss_dssp ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2221100 123599999999999999999999964
No 181
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=98.69 E-value=2.6e-08 Score=89.53 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=63.6
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------------- 376 (411)
+....+||+|+||.||+|.. .++..||||.+........+.|.+|+.++..
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 103 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPG 103 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCC
Confidence 34446999999999999986 5678999999976555556789999999986
Q ss_pred ----cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++........+++.....|+.++++||+|||+.
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 141 (295)
T 2clq_A 104 GSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141 (295)
T ss_dssp EEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 2222211223477888999999999999999963
No 182
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=98.69 E-value=4.2e-09 Score=100.99 Aligned_cols=86 Identities=14% Similarity=0.171 Sum_probs=66.5
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------cccCC
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------ANLLT 381 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------~~l~~ 381 (411)
++|.-.+.||+|+||.||+|.+.++..||||++.... ...++|.+|++++.+ ++..+
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~~~ 266 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK 266 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeecCC
Confidence 4444558999999999999999888899999996543 346789999999987 22211
Q ss_pred CC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. .+..+++..+++|+.+||+||+|||+.
T Consensus 267 g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 303 (454)
T 1qcf_A 267 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR 303 (454)
T ss_dssp CBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11 012478889999999999999999964
No 183
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=98.68 E-value=2e-08 Score=93.24 Aligned_cols=98 Identities=15% Similarity=0.211 Sum_probs=75.5
Q ss_pred cccHHHHHHHhcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccch-----------hhHhHHHHHHHHHH-----
Q 015202 313 RFTYLELFHATNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYRE-----------AFKSFDNEFMTVVD----- 376 (411)
Q Consensus 313 ~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~-----------~~~~f~~e~~~~~~----- 376 (411)
+....++....++|.-.+.||+|+||.||+|...+|..||||++...... ..+.|.+|++++.+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 90 (362)
T 3pg1_A 11 RDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN 90 (362)
T ss_dssp HHHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence 34567888889999999999999999999999888999999998432211 13679999999987
Q ss_pred -----------------------cccCCC------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----------------------ANLLTR------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----------------------~~l~~~------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+. .....+++..+..|+.++++||+|||+.
T Consensus 91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 153 (362)
T 3pg1_A 91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA 153 (362)
T ss_dssp BCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0123589999999999999999999964
No 184
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.67 E-value=3e-09 Score=88.70 Aligned_cols=114 Identities=18% Similarity=0.100 Sum_probs=67.0
Q ss_pred hcccCCcCCceeecCc-cccc----ccchhhhCCCCCCeeecccCccccc----CchhhhccccCCeeeecCCccccc--
Q 015202 13 EINNLTNLIAIYLGGN-KLNG----SISIALGKLQKLQLLGLEDNQLEGS----IPYDLCRLAALFQLDLGDNKLSGF-- 81 (411)
Q Consensus 13 ~~~~~~~L~~L~l~~n-~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~-- 81 (411)
.+...+.|++|+|++| .+.. .+...+...++|++|+|++|.++.. +.+.+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3455666777777776 6642 1334455566677777777766532 223344456677777777766532
Q ss_pred --CCccccCCccCCeeec--ccccCCc-----cCccccCCCCCcEEEcCCCeee
Q 015202 82 --VPSCFGNLTNLRKLYL--GSNQLTY-----IPLTLWNLKYILYLNLSSNSFT 126 (411)
Q Consensus 82 --~~~~~~~l~~L~~L~l--~~n~l~~-----~p~~~~~~~~L~~L~l~~n~l~ 126 (411)
+...+...++|+.|++ ++|.++. +...+...++|++|++++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3444555566777777 6666662 3344445566777777776654
No 185
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=98.66 E-value=7.2e-09 Score=99.25 Aligned_cols=85 Identities=13% Similarity=0.161 Sum_probs=65.7
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------cccCCC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------ANLLTR 382 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------~~l~~~ 382 (411)
+|.-.+.||+|+||.||+|.+.++..||||++.... ...++|.+|++++.+ ++..+.
T Consensus 185 ~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~~g 263 (452)
T 1fmk_A 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKG 263 (452)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTTC
T ss_pred HceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhcCC
Confidence 344457899999999999999877889999996543 235689999999997 222211
Q ss_pred C--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 E--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. .+..+++.++++|+.+||+||+|||+.
T Consensus 264 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 299 (452)
T 1fmk_A 264 SLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299 (452)
T ss_dssp BHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 113489999999999999999999964
No 186
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=98.66 E-value=2.7e-09 Score=95.88 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=58.9
Q ss_pred CCCcCCeeeccCCceEEEEEe----cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI----QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l----~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~---------------------- 376 (411)
+|.-.+.||+|+||.||+|+- ..++.||||.++... ......|.+|++++.+
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 344558999999999999975 246789999995432 2234568999998887
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.+ ...++++.+...++.||++||+|||++
T Consensus 105 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 145 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145 (304)
T ss_dssp ECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4443322 123589999999999999999999974
No 187
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=98.66 E-value=2.9e-08 Score=89.45 Aligned_cols=87 Identities=21% Similarity=0.268 Sum_probs=68.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------ccc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+.|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++.+ +|+
T Consensus 20 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 99 (297)
T 3fxz_A 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (297)
T ss_dssp GTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECC
Confidence 3466668999999999999985 5788999999976555556789999999987 333
Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.+...|+.++++||+|||+.
T Consensus 100 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 135 (297)
T 3fxz_A 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN 135 (297)
T ss_dssp TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2222 122488999999999999999999964
No 188
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=98.66 E-value=8.2e-09 Score=101.00 Aligned_cols=86 Identities=13% Similarity=0.163 Sum_probs=66.0
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------cccCC
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------ANLLT 381 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------~~l~~ 381 (411)
++|.-.+.||+|+||.||+|.+.++..||||++.... ...++|.+|+++|.+ +|+.+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~~~ 345 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK 345 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehhcC
Confidence 3444558899999999999999877889999996543 235689999999997 22211
Q ss_pred CC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. .+..++|.++++|+.+||+||+|||+.
T Consensus 346 gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 382 (535)
T 2h8h_A 346 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382 (535)
T ss_dssp EEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 10 113489999999999999999999964
No 189
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=98.65 E-value=2.4e-08 Score=98.12 Aligned_cols=86 Identities=14% Similarity=0.200 Sum_probs=67.5
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
+|.-.+.||+|+||.||+|.. ..|+.||||.+........+.+.+|+++|.. +|+.
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 455557899999999999987 4689999999966555556789999999987 3333
Q ss_pred CCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++.+...++.||++||+|||++
T Consensus 238 gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~ 274 (573)
T 3uto_A 238 GGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN 274 (573)
T ss_dssp CCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 211 123589999999999999999999974
No 190
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=98.64 E-value=3.1e-08 Score=87.80 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=65.4
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCCC
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLTR 382 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~~ 382 (411)
|.-.+.||+|+||.||+|...++..||||++.... ...++|.+|++++.+ ++..+.
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 34457899999999999999888899999996443 234679999999987 222221
Q ss_pred C-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 E-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++..+.+|+.++++||+|||+.
T Consensus 91 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 125 (269)
T 4hcu_A 91 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125 (269)
T ss_dssp BHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 123489999999999999999999964
No 191
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=98.64 E-value=1.7e-08 Score=91.96 Aligned_cols=85 Identities=14% Similarity=0.176 Sum_probs=64.3
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-------------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-------------------------~~ 378 (411)
|.-.++||+|+||.||+|... +|+.||||++.... ....+.+.+|++++.+ +|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 90 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeC
Confidence 334579999999999999984 48899999996433 2335778999999987 22
Q ss_pred cCCCC---------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE---------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~---------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.++..|+.++++||+|||+.
T Consensus 91 ~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 131 (319)
T 4euu_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (319)
T ss_dssp CTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 21111 112389999999999999999999964
No 192
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=98.64 E-value=9.4e-09 Score=95.24 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=48.8
Q ss_pred cccHHHHHHHhcCCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH
Q 015202 313 RFTYLELFHATNGFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD 376 (411)
Q Consensus 313 ~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~ 376 (411)
.+...++....++|.-.+.||+|+||.||+|.+ .+++.||||++.... ....+.|.+|++++.+
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~ 81 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 81 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHh
Confidence 345555566677787789999999999999974 245689999996543 3345779999999886
No 193
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.64 E-value=1.4e-08 Score=89.10 Aligned_cols=104 Identities=21% Similarity=0.249 Sum_probs=77.3
Q ss_pred cccCCcCCc--eeecCccc---ccccchhhhCCCCCCeeecccCcccc--cCchhhhccccCCeeeecCCcccccCCccc
Q 015202 14 INNLTNLIA--IYLGGNKL---NGSISIALGKLQKLQLLGLEDNQLEG--SIPYDLCRLAALFQLDLGDNKLSGFVPSCF 86 (411)
Q Consensus 14 ~~~~~~L~~--L~l~~n~~---~~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 86 (411)
|...+.|.. ++++.|.. .+..+....++++|+.|+|++|.+++ .++..+..+++|+.|+|++|.+.+. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 555666666 77777743 33333344688999999999999987 4456778899999999999999865 334
Q ss_pred cCCc--cCCeeecccccCC-ccCc-------cccCCCCCcEEE
Q 015202 87 GNLT--NLRKLYLGSNQLT-YIPL-------TLWNLKYILYLN 119 (411)
Q Consensus 87 ~~l~--~L~~L~l~~n~l~-~~p~-------~~~~~~~L~~L~ 119 (411)
..+. +|+.|+|++|.++ .+|. .+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 8999999999997 4552 355789999876
No 194
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.63 E-value=1e-08 Score=89.96 Aligned_cols=105 Identities=22% Similarity=0.205 Sum_probs=76.4
Q ss_pred hhCCCCCCe--eecccCccc---ccCchhhhccccCCeeeecCCcccc--cCCccccCCccCCeeecccccCCccCcccc
Q 015202 38 LGKLQKLQL--LGLEDNQLE---GSIPYDLCRLAALFQLDLGDNKLSG--FVPSCFGNLTNLRKLYLGSNQLTYIPLTLW 110 (411)
Q Consensus 38 ~~~l~~L~~--L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~p~~~~ 110 (411)
|...+.|.. ++++.|... ..++....++++|++|+|++|.+++ .+|..+..+++|+.|+|++|.++.+. .+.
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~~-~l~ 215 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSER-ELD 215 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSGG-GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCch-hhh
Confidence 444455555 677777433 2222233568999999999999997 34566778999999999999999763 344
Q ss_pred CCC--CCcEEEcCCCeeeecCCC-------CccCccCCCeEE
Q 015202 111 NLK--YILYLNLSSNSFTIPLPS-------EIGNLEVLVQID 143 (411)
Q Consensus 111 ~~~--~L~~L~l~~n~l~~~~~~-------~~~~l~~L~~L~ 143 (411)
.+. +|++|++++|.+.+.+|. .+..+++|+.||
T Consensus 216 ~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 216 KIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 444 999999999999876552 356778888776
No 195
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=98.63 E-value=1e-08 Score=95.82 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=65.7
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|.-.+.||+|+||.||+|... +++.||||.+.... .....+|.+|++++.+ ++.
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 194 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcC
Confidence 3444589999999999999985 68899999986443 2335679999999987 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. .+..+++.++.+|+.+||+||+|||+.
T Consensus 195 ~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 232 (377)
T 3cbl_A 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232 (377)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2211 122489999999999999999999964
No 196
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=98.63 E-value=1.3e-08 Score=98.66 Aligned_cols=85 Identities=12% Similarity=0.187 Sum_probs=65.7
Q ss_pred CCCcCCeeeccCCceEEEEEecC-CCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQD-GMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~-~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
+|...+.||+|+||.||+|.+.+ +..||||.+.... ...++|.+|++++.+ ++..
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~ 299 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT 299 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccC
Confidence 34455899999999999999854 7889999996443 235789999999997 2222
Q ss_pred CCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
... ....++|..++.|+.+||+||+|||+.
T Consensus 300 ~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 337 (495)
T 1opk_A 300 YGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337 (495)
T ss_dssp TCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 123589999999999999999999964
No 197
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=98.63 E-value=1.2e-08 Score=94.89 Aligned_cols=85 Identities=12% Similarity=0.113 Sum_probs=62.7
Q ss_pred hcCCCcCCeeeccCCceEEEEE------ecCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKAR------IQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~------l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------- 376 (411)
.+.|...+.||+|+||.||+|+ ...++.||||++.... ..+|..|++++.+
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 3455566899999999999994 4567899999996443 4567777777765
Q ss_pred ------cccCCCC-----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTRE-----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~~-----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....++|..+..|+.+||+||+|||+.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~ 191 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC 191 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 2222111 134599999999999999999999984
No 198
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=98.62 E-value=2.2e-08 Score=93.33 Aligned_cols=82 Identities=16% Similarity=0.217 Sum_probs=60.6
Q ss_pred CCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCCCC-
Q 015202 329 NNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLTRE- 383 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~~~- 383 (411)
.+.||+|+||.||+|.. .+|..||||++........++|.+|++++.+ +|..+..
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46799999999999987 4688999999976655567789999999987 3332211
Q ss_pred ------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 ------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 ------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
....++|..+..|+.+|++||+|||+.
T Consensus 174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 206 (373)
T 2x4f_A 174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQM 206 (373)
T ss_dssp HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 123489999999999999999999964
No 199
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=98.62 E-value=2.5e-08 Score=91.03 Aligned_cols=84 Identities=17% Similarity=0.163 Sum_probs=62.0
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------------~ 377 (411)
+|...+.||+|+||.||+|+. .++.||||++.... .....+..|+.++.+ +
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e 102 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQL-LNEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITA 102 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEE-TTEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred hchhhheecccCceEEEEEEE-CCCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEe
Confidence 344558999999999999998 47899999995432 334456678887766 1
Q ss_pred ccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....++|..+.+|+.++|+||+|||+.
T Consensus 103 ~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 103 FHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred cCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 111111 123489999999999999999999985
No 200
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=98.62 E-value=3e-08 Score=94.88 Aligned_cols=83 Identities=16% Similarity=0.228 Sum_probs=64.0
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~l~ 380 (411)
+|.-.+.||+|+||.||+|.+ .|+.||||.++... ..++|.+|++++.+ +|..
T Consensus 194 ~~~~~~~lG~G~fg~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~ 270 (450)
T 1k9a_A 194 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 270 (450)
T ss_dssp GEEEEEEEEECSSEEEEEEEE-TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCT
T ss_pred HeEEEeeecCcCCeeEEEEEe-cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecC
Confidence 344458999999999999998 57899999996433 45789999999987 2221
Q ss_pred CCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. +...+++.++.+|+.+||+||+|||+.
T Consensus 271 ~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 308 (450)
T 1k9a_A 271 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308 (450)
T ss_dssp TCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 122378999999999999999999964
No 201
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=98.62 E-value=2.2e-08 Score=90.66 Aligned_cols=81 Identities=19% Similarity=0.292 Sum_probs=62.3
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------cccCC---
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------ANLLT--- 381 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------~~l~~--- 381 (411)
|.-.+.||+|+||.||+|.. .++.||||++... ...+.|.+|++++.+ +|..+
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~L 86 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSL 86 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEE-TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCBH
T ss_pred eeeeeEeecCCCceEEEEEE-CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCCH
Confidence 33458899999999999998 5789999998532 345789999999987 22221
Q ss_pred ------CCCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 382 ------REDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 382 ------~~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
......+++...++++.++|+||+|||+
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 120 (307)
T 2eva_A 87 YNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHS 120 (307)
T ss_dssp HHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHh
Confidence 1111237889999999999999999998
No 202
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=98.61 E-value=3e-08 Score=93.20 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=64.4
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------------------c-
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-------------------------A- 377 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-------------------------~- 377 (411)
|.-.++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++.+ +
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~ 90 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF 90 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEec
Confidence 334579999999999999984 48899999996433 2335678899999987 1
Q ss_pred --------ccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 --------NLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 --------~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++........+++..+..|+.++++||+|||+.
T Consensus 91 ~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 131 (396)
T 4eut_A 91 CPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN 131 (396)
T ss_dssp CTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 122111122389999999999999999999964
No 203
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=98.60 E-value=3.4e-08 Score=89.60 Aligned_cols=86 Identities=19% Similarity=0.220 Sum_probs=64.2
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|...+.||+|+||.||+|...+|+.||||++.... ......+.+|++++.+ ++.
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 101 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence 344558999999999999999889999999985432 2234679999999987 222
Q ss_pred CCC------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTR------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+. .....+++.....|+.++++||+|||+.
T Consensus 102 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 138 (311)
T 3niz_A 102 EKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH 138 (311)
T ss_dssp SEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 110 0123489999999999999999999964
No 204
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=98.60 E-value=4.9e-08 Score=87.34 Aligned_cols=87 Identities=22% Similarity=0.378 Sum_probs=65.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchh-------hHhHHHHHHHHHH-------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREA-------FKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~-------~~~f~~e~~~~~~------------------- 376 (411)
++|.-.+.||+|+||.||+|.. .+++.||||++....... .+.|.+|++++.+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 3444558899999999999987 468899999984432211 1679999999987
Q ss_pred --cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ...+++|..+..|+.++++||+|||+.
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 141 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ 141 (287)
T ss_dssp EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 2222111 234599999999999999999999974
No 205
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=98.60 E-value=5e-08 Score=87.88 Aligned_cols=87 Identities=15% Similarity=0.138 Sum_probs=61.6
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc--------------------------hhhHhHHHHHHHHHH
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR--------------------------EAFKSFDNEFMTVVD 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~--------------------------~~~~~f~~e~~~~~~ 376 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++..... ...+.|.+|++++.+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 3455568999999999999986 4678899999854321 113568999999987
Q ss_pred -------------------------cccCC-----CCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -------------------------ANLLT-----REDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -------------------------~~l~~-----~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+ .....++++.+...++.++++||+|||+.
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 156 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ 156 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22211 11234589999999999999999999964
No 206
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=98.60 E-value=2.3e-08 Score=95.06 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=72.5
Q ss_pred cHHHHHHHhcCCCcCCeeeccCCceEEEEEecC-CCEEEEEEEecccc---hhhHhHHHHHHHHHH--------------
Q 015202 315 TYLELFHATNGFSANNIIGRGGIGSIYKARIQD-GMEVAVKVFDLQYR---EAFKSFDNEFMTVVD-------------- 376 (411)
Q Consensus 315 ~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l~~-~~~vavk~l~~~~~---~~~~~f~~e~~~~~~-------------- 376 (411)
.+.++...+++|...++||+|+||.||+|...+ ++.||||++..... .....|.+|+.++..
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 455666677888888999999999999999854 67899999954321 223459999999886
Q ss_pred ---------cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ....+++.....++.+++.||+|||+.
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~ 194 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL 194 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3332211 124589999999999999999999964
No 207
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=98.59 E-value=2.3e-08 Score=92.11 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=64.6
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------c-
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-------------------------A- 377 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-------------------------~- 377 (411)
|.-.+.||+|+||.||++...+++.||||++.... ....+.|.+|++++.+ +
T Consensus 11 y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~ 90 (343)
T 3dbq_A 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 90 (343)
T ss_dssp EEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred EEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC
Confidence 44558999999999999998889999999985432 3345789999998886 1
Q ss_pred -------ccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 -------NLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 -------~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. ....+++..+..|+.++++||+|||+.
T Consensus 91 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~~ 127 (343)
T 3dbq_A 91 GNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH 127 (343)
T ss_dssp CSEEHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 123589999999999999999999964
No 208
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=98.59 E-value=2.5e-08 Score=91.41 Aligned_cols=86 Identities=13% Similarity=0.154 Sum_probs=65.9
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------- 376 (411)
+|.-.+.||+|+||.||+|.. .+|+.||||++........+.|.+|+.++.+
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~ 108 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAE 108 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEE
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCce
Confidence 344558999999999999997 4688999999865555556789999988875
Q ss_pred -----cccC--------CCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLL--------TREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~--------~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.. ......+++|..+.+|+.++++||+|||+.
T Consensus 109 ~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 155 (337)
T 3ll6_A 109 FLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155 (337)
T ss_dssp EEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0110 000123589999999999999999999974
No 209
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=98.59 E-value=3.3e-08 Score=91.40 Aligned_cols=88 Identities=17% Similarity=0.137 Sum_probs=65.4
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEec----CCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARIQ----DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l~----~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------- 376 (411)
...+.|.-.+.||+|+||.||+|+-. .++.||||++.... ....+.+|++++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34566777789999999999999742 35689999985432 24568899998875
Q ss_pred ----cccCCCC---CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTRE---DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~~---~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. .-..+++.+...++.|+++||+|||++
T Consensus 96 ~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~ 136 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF 136 (361)
T ss_dssp EEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3433222 012488888999999999999999974
No 210
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=98.59 E-value=7.9e-08 Score=86.57 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=60.7
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------- 376 (411)
++|.-.+.||+|+||.||+|.. +|+.||||++... ....+..|.+++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 3455668999999999999998 7899999998533 34556667766654
Q ss_pred --cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccC
Q 015202 377 --ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVES 408 (411)
Q Consensus 377 --~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh 408 (411)
+|..... ....++|..+.+|+.++|+||+|||
T Consensus 84 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH 122 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLH 122 (301)
T ss_dssp EECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred ehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHH
Confidence 1111111 2335899999999999999999999
No 211
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=98.58 E-value=3.6e-08 Score=88.07 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=62.7
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLT 381 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~ 381 (411)
+|...+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+ ++..+
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 103 (283)
T 3gen_A 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMAN 103 (283)
T ss_dssp GEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTT
T ss_pred HHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCC
Confidence 3444589999999999999998888999999965432 34679999999987 22221
Q ss_pred CC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. ....+++.++.+|+.++++||+|||+.
T Consensus 104 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 139 (283)
T 3gen_A 104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139 (283)
T ss_dssp CBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11 023489999999999999999999964
No 212
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=98.58 E-value=6.7e-08 Score=90.41 Aligned_cols=87 Identities=13% Similarity=0.163 Sum_probs=67.9
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------ccc
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+.|.-.+.||+|+||.||+|... +|+.||+|.+..........+.+|++++.+ +|+
T Consensus 51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 130 (387)
T 1kob_A 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL 130 (387)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence 34556689999999999999874 688999999976555556789999999987 333
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.....|+.+|++||+|||+.
T Consensus 131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 168 (387)
T 1kob_A 131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168 (387)
T ss_dssp CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2211 123589999999999999999999964
No 213
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=98.57 E-value=3.5e-08 Score=92.54 Aligned_cols=82 Identities=20% Similarity=0.251 Sum_probs=64.7
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------c-
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-------------------------A- 377 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-------------------------~- 377 (411)
|...+.||+|+||.||++...+|+.||||++.... ......|.+|+.++.+ +
T Consensus 58 y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E~ 137 (390)
T 2zmd_A 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC 137 (390)
T ss_dssp EEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEec
Confidence 55568999999999999998789999999985432 3345789999998876 1
Q ss_pred -------ccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 -------NLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 -------~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. ....+++..+..|+.+|++||+|||+.
T Consensus 138 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 138 GNIDLNSWLK---KKKSIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp CSEEHHHHHH---HCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 123588889999999999999999974
No 214
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=98.57 E-value=3.7e-08 Score=87.19 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=65.3
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLT 381 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~ 381 (411)
+|.-.+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+ ++..+
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISN 87 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred heeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCC
Confidence 3444588999999999999998888899999964432 34679999999987 22221
Q ss_pred CC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 RE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 ~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. .+..+++.++..|+.++++||+|||+.
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 123 (268)
T 3sxs_A 88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123 (268)
T ss_dssp CBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11 122489999999999999999999964
No 215
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=98.57 E-value=2.8e-08 Score=93.69 Aligned_cols=97 Identities=16% Similarity=0.211 Sum_probs=72.9
Q ss_pred ccHHHHHHHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-------------
Q 015202 314 FTYLELFHATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 314 ~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~------------- 376 (411)
+.+.+....+++|...++||+|+||.||++.. .+|+.||||++.... ......|.+|..++..
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 34555566678888889999999999999998 468999999995432 2234568999998886
Q ss_pred ----------cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. .+..+++.....++.+|++||+|||+.
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 181 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL 181 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332221 123588999999999999999999964
No 216
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=98.56 E-value=2.9e-08 Score=92.39 Aligned_cols=86 Identities=19% Similarity=0.218 Sum_probs=63.3
Q ss_pred CCCcCCeeeccCCceEEEEEec--------CCCEEEEEEEecccc-hhhHhHHHHHHHHHH-------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ--------DGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~--------~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~------------------- 376 (411)
+|.-.+.||+|+||.||+|+.. ++..||||.+..... ...++|.+|++++.+
T Consensus 82 ~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 161 (370)
T 2psq_A 82 KLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161 (370)
T ss_dssp GEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSS
T ss_pred HCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCC
Confidence 4445578999999999999862 345799999965433 345789999999886
Q ss_pred -----cccCC---------CC-------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLT---------RE-------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~---------~~-------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+ .. ....++|..+.+|+.+||+||+|||+.
T Consensus 162 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 222 (370)
T 2psq_A 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222 (370)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22111 10 112489999999999999999999964
No 217
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=98.56 E-value=2.6e-08 Score=88.82 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=65.2
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------cccCCC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------ANLLTR 382 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------~~l~~~ 382 (411)
+|.-.+.||+|+||.||+|...++..||||++.... ...+.|.+|++++.+ ++..+.
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~ 92 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENG 92 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTTC
T ss_pred hhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCCCC
Confidence 344558999999999999999888899999995433 235689999999987 222111
Q ss_pred C-----C---CCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 E-----D---KHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ~-----~---~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. . +..+++..+.+|+.++++||+|||+.
T Consensus 93 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 128 (279)
T 1qpc_A 93 SLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128 (279)
T ss_dssp BHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1 1 11489999999999999999999964
No 218
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=98.56 E-value=4.1e-08 Score=87.96 Aligned_cols=85 Identities=19% Similarity=0.174 Sum_probs=64.5
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccc--hhhHhHHHHHHHHHH-----------------------cccC
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
|.-.+.||+|+||.||+|...+|+.||||++..... .....+.+|++++.+ ++..
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 444578999999999999987799999999954332 224678999999987 1111
Q ss_pred CC------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TR------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+. .....+++.....++.++++||+|||+.
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (288)
T 1ob3_A 84 QDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (288)
T ss_dssp EEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 10 0123589999999999999999999964
No 219
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=98.56 E-value=4.7e-08 Score=86.64 Aligned_cols=85 Identities=20% Similarity=0.212 Sum_probs=62.4
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccc----hhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYR----EAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~----~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|.. .|..||||++..... ...+.|.+|++++.. +
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 445568999999999999998 578999999854322 224679999999887 2
Q ss_pred ccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++....+|+.++++||+|||+.
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 124 (271)
T 3dtc_A 87 FARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124 (271)
T ss_dssp CCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 221111 234589999999999999999999963
No 220
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=98.56 E-value=6.9e-08 Score=85.31 Aligned_cols=84 Identities=12% Similarity=0.104 Sum_probs=65.0
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCCC
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLTR 382 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~~ 382 (411)
|.-.+.||+|+||.||+|...++..||||++..... ..++|.+|++++.+ ++..+.
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 88 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTC
T ss_pred eeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCC
Confidence 344578999999999999998888999999965432 34679999999987 222211
Q ss_pred C-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 E-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++..+.+++.++++||+|||+.
T Consensus 89 ~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 123 (267)
T 3t9t_A 89 CLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123 (267)
T ss_dssp BHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1 123489999999999999999999964
No 221
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=98.56 E-value=7.6e-08 Score=87.38 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=63.3
Q ss_pred CeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cccCCCC-
Q 015202 330 NIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ANLLTRE- 383 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~l~~~~- 383 (411)
++||+|+||.||+|.. .+|+.||||++..........+.+|++++.+ ++..+..
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999985 4688999999966555556789999998875 2222111
Q ss_pred -----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 -----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 -----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
....+++.....|+.++++||+|||+.
T Consensus 99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 123588999999999999999999964
No 222
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=98.55 E-value=5.6e-08 Score=96.55 Aligned_cols=78 Identities=14% Similarity=0.215 Sum_probs=62.1
Q ss_pred eeeccCCceEEEEEec---CCCEEEEEEEeccc-chhhHhHHHHHHHHHH------------------------------
Q 015202 331 IIGRGGIGSIYKARIQ---DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------------ 376 (411)
Q Consensus 331 ~lg~g~~g~vy~g~l~---~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------------ 376 (411)
.||+|+||.||+|.+. ++..||||+++... ....++|.+|++++.+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 7999999999999874 45679999996543 3346789999999987
Q ss_pred -cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++++. ....++|.++..|+.+||+||+|||+.
T Consensus 423 ~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~ 455 (613)
T 2ozo_A 423 HKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK 455 (613)
T ss_dssp HHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22222 134599999999999999999999964
No 223
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=98.55 E-value=2.5e-08 Score=90.63 Aligned_cols=86 Identities=13% Similarity=0.088 Sum_probs=65.3
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------- 376 (411)
+|.-.+.||+|+||.||++.. .+|+.||||++........+.|.+|++++..
T Consensus 30 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~ 109 (317)
T 2buj_A 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEE
Confidence 444568999999999999986 5789999999866555566789999999887
Q ss_pred cccCCCC----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ...++++.++.+|+.++++||+|||+.
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 153 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK 153 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111111 124589999999999999999999964
No 224
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=98.55 E-value=7e-08 Score=88.13 Aligned_cols=84 Identities=18% Similarity=0.244 Sum_probs=65.3
Q ss_pred CcCCeeeccCCceEEEEEe-----cCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 327 SANNIIGRGGIGSIYKARI-----QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 327 ~~~~~lg~g~~g~vy~g~l-----~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
.-.+.||+|+||.||++.+ .+|+.||||++........+.|.+|++++.+
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 3447899999999999985 3578999999976655666789999999987
Q ss_pred cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....++|.++.+|+.++++||+|||+.
T Consensus 124 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 164 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164 (326)
T ss_dssp CCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111111 123489999999999999999999963
No 225
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=98.55 E-value=6.2e-08 Score=90.06 Aligned_cols=86 Identities=15% Similarity=0.232 Sum_probs=64.0
Q ss_pred CCCcCCeeeccCCceEEEEEec------CCCEEEEEEEecc-cchhhHhHHHHHHHHHH---------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ------DGMEVAVKVFDLQ-YREAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~------~~~~vavk~l~~~-~~~~~~~f~~e~~~~~~--------------------- 376 (411)
+|.-.+.||+|+||.||+|.+. .+..||||++... ......+|.+|+.++.+
T Consensus 72 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 151 (367)
T 3l9p_A 72 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151 (367)
T ss_dssp GEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEE
Confidence 3444578999999999999963 3568999999543 33445679999999987
Q ss_pred --ccc---------CCCC----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANL---------LTRE----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l---------~~~~----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. .... ....++|.++.+|+.+||+||+|||+.
T Consensus 152 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 200 (367)
T 3l9p_A 152 LLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 200 (367)
T ss_dssp EEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 222 1110 113489999999999999999999964
No 226
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=98.55 E-value=6.3e-08 Score=86.92 Aligned_cols=86 Identities=20% Similarity=0.138 Sum_probs=65.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------cc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
+|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++.+ ++
T Consensus 3 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 82 (292)
T 3o0g_A 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_dssp SEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred CceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEec
Confidence 3445578999999999999874 58899999995433 2334778999999987 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....|+.++++||+|||+.
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 120 (292)
T 3o0g_A 83 CDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 21100 124589999999999999999999964
No 227
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=98.55 E-value=3.8e-08 Score=90.49 Aligned_cols=90 Identities=17% Similarity=0.199 Sum_probs=67.3
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEecC------CCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARIQD------GMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------------- 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l~~------~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------------- 376 (411)
...++|.-.+.||+|+||.||+|...+ +..||||.+.... ....+.|.+|++++.+
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 345666677899999999999999842 3789999996543 3335789999999987
Q ss_pred ------cccCCCC------------------------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTRE------------------------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~~------------------------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ...+++|.++..|+.+|++||+|||+.
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~ 193 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2211100 014599999999999999999999964
No 228
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=98.54 E-value=7.4e-08 Score=88.06 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=66.5
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++.. +
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e 94 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIME 94 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEE
Confidence 4555668999999999999987 578999999995432 2345678999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....+++.....++.++++||+|||+.
T Consensus 95 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~ 133 (328)
T 3fe3_A 95 YASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133 (328)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222211 123488889999999999999999964
No 229
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=98.54 E-value=8.3e-08 Score=87.53 Aligned_cols=86 Identities=16% Similarity=0.137 Sum_probs=63.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc-hhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|.-.+.||+|+||.||+|... +++.||||.+..... ...+.+.+|+.++.. +|.
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 87 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence 4555689999999999999874 688999999854332 334679999999887 222
Q ss_pred CC-----CC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LT-----RE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~-----~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+ .. ....+++....+|+.++++||+|||+.
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 124 (323)
T 3tki_A 88 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124 (323)
T ss_dssp TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11 11 223599999999999999999999964
No 230
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=98.54 E-value=4.6e-08 Score=87.04 Aligned_cols=86 Identities=16% Similarity=0.180 Sum_probs=66.8
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|.-.+.||+|+||.||+|... ++..||+|++........+.|.+|++++.+ ++..
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (277)
T 3f3z_A 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCT 89 (277)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred hEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccC
Confidence 3455689999999999999874 467899999976555556789999999987 2222
Q ss_pred CCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++....+|+.++++||+|||+.
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 125 (277)
T 3f3z_A 90 GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL 125 (277)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 211 123489999999999999999999964
No 231
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=98.53 E-value=5.6e-08 Score=87.06 Aligned_cols=85 Identities=21% Similarity=0.232 Sum_probs=64.8
Q ss_pred CCcCCeeeccCCceEEEEEecC-C-------CEEEEEEEecccchhhHhHHHHHHHHHH---------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQD-G-------MEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~-~-------~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------- 376 (411)
|.-.+.||+|+||.||+|+..+ + ..||+|.+........+.|.+|++++.+
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENIL 89 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEE
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEE
Confidence 3445789999999999998732 2 4699999976655667889999999987
Q ss_pred --cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++..+.+|+.++++||+|||+.
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 132 (289)
T 4fvq_A 90 VQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN 132 (289)
T ss_dssp EEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 2222211 122389999999999999999999964
No 232
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=98.53 E-value=5.4e-08 Score=88.93 Aligned_cols=86 Identities=17% Similarity=0.230 Sum_probs=59.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCE----EEEEEEecc-cchhhHhHHHHHHHHHH----------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGME----VAVKVFDLQ-YREAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~----vavk~l~~~-~~~~~~~f~~e~~~~~~---------------------- 376 (411)
+|...+.||+|+||.||+|... +|.. ||+|.+... .....++|.+|+.++.+
T Consensus 16 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v~ 95 (327)
T 3poz_A 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT 95 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEEE
T ss_pred HcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3555689999999999999863 4443 588887433 23446789999999987
Q ss_pred cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.... ....++|..+..|+.++|+||+|||+.
T Consensus 96 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 136 (327)
T 3poz_A 96 QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136 (327)
T ss_dssp ECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 1111111 124589999999999999999999964
No 233
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=98.53 E-value=1.2e-07 Score=89.72 Aligned_cols=89 Identities=10% Similarity=0.182 Sum_probs=66.2
Q ss_pred HhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--------chhhHhHHHHHHHHHH----------------
Q 015202 322 ATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--------REAFKSFDNEFMTVVD---------------- 376 (411)
Q Consensus 322 at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--------~~~~~~f~~e~~~~~~---------------- 376 (411)
..++|.-.+.||+|+||.||+|.. .+++.||||.+.... ......|.+|++++.+
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 355676778999999999999987 457899999985432 1123468999999987
Q ss_pred ------cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....|+.++++||+|||+.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 258 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 258 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 234589999999999999999999964
No 234
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.53 E-value=1.3e-07 Score=84.52 Aligned_cols=79 Identities=14% Similarity=0.201 Sum_probs=62.4
Q ss_pred CeeeccCCceEEEEEec---CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------------
Q 015202 330 NIIGRGGIGSIYKARIQ---DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------------------------- 376 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~---~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------------------------- 376 (411)
..||+|+||.||+|+.. ++..||||.+.... ....+.|.+|++++.+
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 95 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGP 95 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEEeCCCCC
Confidence 48999999999999863 56789999996543 3346789999999987
Q ss_pred --cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.. ....+++.++.+|+.++++||+|||+.
T Consensus 96 L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~ 129 (287)
T 1u59_A 96 LHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEEK 129 (287)
T ss_dssp HHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22221 124599999999999999999999964
No 235
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=98.52 E-value=4.9e-08 Score=90.05 Aligned_cols=85 Identities=19% Similarity=0.221 Sum_probs=65.2
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc---hhhHhHHHHHHHHHH-----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
|...+.||+|+||.||+|.. .+|+.||||++..... ...++|.+|++++.+ +|
T Consensus 56 y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 135 (348)
T 1u5q_A 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 135 (348)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEec
Confidence 55668899999999999986 5788999999964322 234679999999987 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ...+++|..+..|+.++++||+|||+.
T Consensus 136 ~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 173 (348)
T 1u5q_A 136 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173 (348)
T ss_dssp CSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 21100 124589999999999999999999964
No 236
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=98.52 E-value=4.6e-08 Score=89.39 Aligned_cols=85 Identities=15% Similarity=0.201 Sum_probs=65.6
Q ss_pred CCcCCeeeccCCceEEEEEe-----cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------
Q 015202 326 FSANNIIGRGGIGSIYKARI-----QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-----~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------ 376 (411)
|.-.+.||+|+||.||++++ .++..||||++........+.|.+|++++.+
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 104 (327)
T 3lxl_A 25 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLV 104 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEE
T ss_pred hhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEE
Confidence 33447999999999999985 4578899999976655556789999999987
Q ss_pred -cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....++|.++..|+.++++||+|||+.
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 146 (327)
T 3lxl_A 105 MEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR 146 (327)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2221111 012489999999999999999999964
No 237
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=98.51 E-value=1.1e-07 Score=87.11 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=61.5
Q ss_pred CCeeeccCCceEEEEEecC-----CCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 329 NNIIGRGGIGSIYKARIQD-----GMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~-----~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
.+.||+|+||.||+|.... +..||||.+.... .....+|.+|++++.+ ++.
T Consensus 49 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 128 (333)
T 1mqb_A 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYM 128 (333)
T ss_dssp EEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred ccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCC
Confidence 4789999999999998742 2359999996543 2345679999999987 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....++|.++.+|+.++++||+|||+.
T Consensus 129 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 166 (333)
T 1mqb_A 129 ENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM 166 (333)
T ss_dssp TTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111 123589999999999999999999963
No 238
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=98.51 E-value=8.3e-08 Score=88.56 Aligned_cols=86 Identities=16% Similarity=0.232 Sum_probs=59.3
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cc
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
.+.|...+.||+|+||.||+|... +++.||||++.... ..+.|.+|++++.+ +|
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 345666689999999999999985 47889999996432 34578899999987 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.+...|+.++++||+|||+.
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 167 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22111 123489999999999999999999964
No 239
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=98.51 E-value=7.2e-08 Score=88.77 Aligned_cols=87 Identities=15% Similarity=0.202 Sum_probs=65.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+ +|
T Consensus 10 ~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~ 89 (347)
T 3zgw_A 10 KYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEY 89 (347)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeC
Confidence 4455568999999999999986 578999999995443 2334679999999987 23
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....|+.++++||+|||+.
T Consensus 90 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 127 (347)
T 3zgw_A 90 CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ 127 (347)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22211 123489999999999999999999963
No 240
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=98.51 E-value=1.4e-07 Score=85.76 Aligned_cols=83 Identities=14% Similarity=0.130 Sum_probs=63.1
Q ss_pred cCCeeeccCCceEEEEEec-----CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------------------
Q 015202 328 ANNIIGRGGIGSIYKARIQ-----DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~-----~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------- 376 (411)
..+.||+|+||.||++.+. +|+.||||++.... ....+.|.+|++++.+
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 4478999999999999763 57789999996543 3445779999999987
Q ss_pred cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ....++|.++..|+.++++||+|||+.
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~ 153 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111111 123489999999999999999999964
No 241
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=98.51 E-value=8.7e-08 Score=86.36 Aligned_cols=86 Identities=16% Similarity=0.169 Sum_probs=64.5
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|.-.+.||+|+||.||+|... +|..||+|.+........+.|.+|++++.+ ++..
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 3445578999999999999985 588999999966555556789999999987 2221
Q ss_pred CCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++..+..|+.++++||.|||+.
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 136 (302)
T 2j7t_A 100 GGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136 (302)
T ss_dssp TEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 111 123589999999999999999999964
No 242
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=98.50 E-value=9.6e-08 Score=95.22 Aligned_cols=81 Identities=15% Similarity=0.150 Sum_probs=61.9
Q ss_pred CeeeccCCceEEEEEec---CCCEEEEEEEecccc--hhhHhHHHHHHHHHH----------------------cccCCC
Q 015202 330 NIIGRGGIGSIYKARIQ---DGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD----------------------ANLLTR 382 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~---~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~----------------------~~l~~~ 382 (411)
+.||+|+||.||+|.+. .+..||||+++.... ...++|.+|++++.+ +|..+.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 57999999999999773 356799999965432 335789999999997 222111
Q ss_pred C------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 E------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....++|.++..|+.+||+||+|||+.
T Consensus 455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~ 488 (635)
T 4fl3_A 455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 488 (635)
T ss_dssp EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1 123589999999999999999999964
No 243
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=98.50 E-value=7.7e-08 Score=88.18 Aligned_cols=87 Identities=20% Similarity=0.269 Sum_probs=62.3
Q ss_pred cCCCcCCeeeccCCceEEEEEe--------cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI--------QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------ 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l--------~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------ 376 (411)
++|.-.+.||+|+||.||+|.. .++..||||++.... ....+.|.+|++++.+
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 114 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 114 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC
Confidence 3444558999999999999986 246789999996443 3345779999998876
Q ss_pred ---------------cccCCCC-------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------------ANLLTRE-------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------------~~l~~~~-------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.... ....++|..+.+|+.++++||+|||+.
T Consensus 115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 176 (334)
T 2pvf_A 115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176 (334)
T ss_dssp CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1121111 012389999999999999999999964
No 244
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=98.50 E-value=2.2e-07 Score=84.90 Aligned_cols=81 Identities=12% Similarity=0.139 Sum_probs=62.1
Q ss_pred CeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH------------------------cccCCC
Q 015202 330 NIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------------------ANLLTR 382 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------------------~~l~~~ 382 (411)
+.||+|+||.||+|... +|+.||||.+.... .....++.+|+.++.. ++..+.
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 78999999999999874 58899999985433 2335789999998876 222110
Q ss_pred --------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 --------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 --------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.....+++.++..|+.++++||+|||+.
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~ 150 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1124599999999999999999999963
No 245
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=98.50 E-value=6.5e-08 Score=87.77 Aligned_cols=88 Identities=17% Similarity=0.224 Sum_probs=65.9
Q ss_pred hcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH------------cc--------c-
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------AN--------L- 379 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------~~--------l- 379 (411)
.+.|.-.+.||+|+||.||++...+|+.||||.+.... ......|.+|++++.+ ++ +
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 34455568999999999999998889999999995432 3345789999988876 00 0
Q ss_pred CCCC---------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE---------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~---------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++..+..|+.++++||+|||+.
T Consensus 107 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 146 (313)
T 3cek_A 107 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 146 (313)
T ss_dssp ECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0000 123588999999999999999999964
No 246
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=98.49 E-value=2.1e-08 Score=91.34 Aligned_cols=94 Identities=15% Similarity=0.114 Sum_probs=68.3
Q ss_pred HHHHHHhcCCCcCCeeeccCCceEEEEEec------CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------
Q 015202 317 LELFHATNGFSANNIIGRGGIGSIYKARIQ------DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 317 ~~l~~at~~f~~~~~lg~g~~g~vy~g~l~------~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------- 376 (411)
+++....++|...+.||+|+||.||+|+.. .+..||||.+.... ......|.+|++++.+
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344445566667789999999999999863 36789999996433 3345679999999987
Q ss_pred ----------cccCCCC----------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------ANLLTRE----------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------~~l~~~~----------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ...+++|..+.+|+.++++||+|||+.
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 157 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN 157 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 1211110 013468999999999999999999964
No 247
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=98.49 E-value=1.2e-07 Score=86.77 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=63.8
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~ 378 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||.+.... ....|..|++++.+ ++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 3455668999999999999985 578899999985432 23468899988876 33
Q ss_pred cCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. +.. ....++|..+..|+.++++||+|||+.
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK 124 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3 211 134699999999999999999999964
No 248
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=98.49 E-value=9.7e-08 Score=86.71 Aligned_cols=86 Identities=17% Similarity=0.172 Sum_probs=60.9
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH----------cccCC------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------ANLLT------------ 381 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------~~l~~------------ 381 (411)
.|...+.||+|+||.||+|... +|+.||||++........++|.+|++++.+ ++...
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 3445588999999999999985 488999999976655666889999999986 11100
Q ss_pred --------------CC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 382 --------------RE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 382 --------------~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.. ...++++.....|+.++++||+|||+.
T Consensus 92 ~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (320)
T 2i6l_A 92 TELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA 139 (320)
T ss_dssp CSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 00 123478899999999999999999964
No 249
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=98.49 E-value=8.9e-08 Score=88.21 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=65.4
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchh-----------------hHhHHHHHHHHHH----------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREA-----------------FKSFDNEFMTVVD---------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~-----------------~~~f~~e~~~~~~---------- 376 (411)
++|.-.+.||+|+||.||+|.. +|..||||++....... .+.|.+|+.++.+
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 3455568999999999999998 88999999985432211 1789999999987
Q ss_pred -------------cccCC------------CC--CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 -------------ANLLT------------RE--DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 -------------~~l~~------------~~--~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+|..+ .. ....++|..+..|+.++++||+|||+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 169 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc
Confidence 22111 11 13569999999999999999999996
No 250
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=98.49 E-value=9.2e-08 Score=85.72 Aligned_cols=82 Identities=18% Similarity=0.311 Sum_probs=61.8
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH--------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-------------------------- 376 (411)
.|.-.+.||+|+||.||+|... ..||||.+.... ....+.|.+|++++.+
T Consensus 25 ~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~~ 102 (289)
T 3og7_A 25 QITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCE 102 (289)
T ss_dssp SCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCC
T ss_pred ceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEecC
Confidence 4445589999999999999874 369999985433 3445789999999987
Q ss_pred -----cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++++. ....++|.++.+|+.++++||+|||+.
T Consensus 103 ~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~ 139 (289)
T 3og7_A 103 GSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHAK 139 (289)
T ss_dssp EEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 12221 123589999999999999999999963
No 251
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=98.49 E-value=1.1e-07 Score=86.01 Aligned_cols=86 Identities=16% Similarity=0.102 Sum_probs=64.9
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc--hhhHhHHHHHHHHHH-----------------------cc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
+|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|++++.+ ++
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 4455689999999999999984 488999999844332 235678999999987 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....|+.++++||+|||+.
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 121 (311)
T 4agu_A 84 CDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121 (311)
T ss_dssp CSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 21110 134589999999999999999999963
No 252
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=98.49 E-value=2.1e-07 Score=84.96 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=61.0
Q ss_pred CCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cccCCCC
Q 015202 329 NNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ANLLTRE 383 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~l~~~~ 383 (411)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.++.. ++..+..
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999984 5889999999532 34567888888775 2222211
Q ss_pred ------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 ------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 ------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
....+++.+...|+.++++||+|||+.
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 125 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 123589999999999999999999964
No 253
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=98.49 E-value=1.8e-07 Score=89.99 Aligned_cols=84 Identities=18% Similarity=0.164 Sum_probs=64.5
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~ 378 (411)
++|...++||+|+||.||+|+. .+|..||||.+..... ..++..|++++.. ++
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 4566678999999999999986 5689999998854332 3468888888876 22
Q ss_pred cCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+ +.. ....++|.+++.|+.+|++||+|||+.
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 122 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK 122 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2 111 134599999999999999999999964
No 254
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=98.49 E-value=1.7e-07 Score=85.52 Aligned_cols=85 Identities=15% Similarity=0.247 Sum_probs=64.9
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch------hhHhHHHHHHHHHH----------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE------AFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~------~~~~f~~e~~~~~~---------------------- 376 (411)
|...+.||+|+||.||++... +|..||||.+...... ....|.+|+.++.+
T Consensus 13 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 92 (326)
T 2y0a_A 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILI 92 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 445589999999999999874 5889999998543221 24679999999987
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....|+.++++||+|||+.
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~ 133 (326)
T 2y0a_A 93 LELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL 133 (326)
T ss_dssp EECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123589999999999999999999963
No 255
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=98.49 E-value=1.4e-07 Score=87.38 Aligned_cols=86 Identities=16% Similarity=0.227 Sum_probs=65.3
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch------hhHhHHHHHHHHHH---------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE------AFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~------~~~~f~~e~~~~~~--------------------- 376 (411)
.|.-.+.||+|+||.||++... +|..||||.+...... ....|.+|+.++.+
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4445589999999999999874 5889999999543321 24679999999987
Q ss_pred --cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....++.+|++||.|||+.
T Consensus 93 v~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 134 (361)
T 2yab_A 93 ILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134 (361)
T ss_dssp EEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123589999999999999999999964
No 256
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=98.48 E-value=1.6e-07 Score=84.70 Aligned_cols=86 Identities=16% Similarity=0.246 Sum_probs=65.9
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
.|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.|.+|+.++.+ +|.
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 355568899999999999986 468899999996543 3345789999999987 222
Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ...++++..+..++.++++||.|||+.
T Consensus 103 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 138 (303)
T 3a7i_A 103 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSE 138 (303)
T ss_dssp TTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2111 224589999999999999999999963
No 257
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=98.48 E-value=1.2e-07 Score=84.63 Aligned_cols=87 Identities=13% Similarity=0.273 Sum_probs=65.6
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
++|.-.+.||+|+||.||+|.. .+|..||||++.... ....+.+.+|++++.+ +
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 85 (284)
T 3kk8_A 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 85 (284)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 4455568999999999999987 458899999995433 2345678999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++.....++.++++||+|||+.
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 124 (284)
T 3kk8_A 86 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124 (284)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222211 123488999999999999999999964
No 258
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=98.48 E-value=1.3e-07 Score=87.74 Aligned_cols=87 Identities=13% Similarity=0.273 Sum_probs=66.5
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
++|.-.+.||+|+||.||+|.. .+|..||||.+.... ....+.|.+|++++.+ +
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e 108 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD 108 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4455668999999999999987 458899999996432 2345679999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++.....++.+|++||+|||+.
T Consensus 109 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~ 147 (362)
T 2bdw_A 109 LVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 147 (362)
T ss_dssp CCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222211 123589999999999999999999964
No 259
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=98.48 E-value=8e-08 Score=88.38 Aligned_cols=88 Identities=16% Similarity=0.284 Sum_probs=62.0
Q ss_pred hcCCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------- 376 (411)
.++|.-.+.||+|+||.||+|.. ..+..||||.+.... ....+.|.+|+.++.+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 34555668999999999999986 235579999995432 3345779999998886
Q ss_pred -----cc---------cCCCCC--------------------CCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----AN---------LLTRED--------------------KHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~---------l~~~~~--------------------~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++ +..... ...++|..+..|+.++++||+|||+.
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 191 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK 191 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11 111110 12389999999999999999999963
No 260
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=98.47 E-value=1.7e-07 Score=84.22 Aligned_cols=84 Identities=17% Similarity=0.145 Sum_probs=64.9
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~ 378 (411)
++|.-.+.||+|+||.||+|+. .+|+.||||++..... ..+|.+|++++.. ++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 4555668999999999999986 5788999999854332 3468899988876 22
Q ss_pred cCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. +.. ....+++..+.+|+.++++||+|||+.
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 124 (296)
T 3uzp_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred c-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2 111 134599999999999999999999964
No 261
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.47 E-value=4.1e-08 Score=92.80 Aligned_cols=53 Identities=17% Similarity=0.199 Sum_probs=39.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc---hhhHhHHHHHHHHHH
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~ 376 (411)
..|...++||+|+||.||+|+. .+|+.||||++..... ...+.|.+|+.++..
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~ 134 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRL 134 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGG
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHh
Confidence 3455568999999999999995 5689999999863322 224678888877664
No 262
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=98.47 E-value=2.3e-07 Score=83.40 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=63.2
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~l 379 (411)
+|...+.||+|+||.||+|.. .+|+.||||.+.... ....+.+|++++.. ++.
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 455568999999999999985 578899999985332 23567888887775 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. .+.++++..+.+|+.++++||+|||+.
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 125 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 125 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 134599999999999999999999974
No 263
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.47 E-value=3.2e-06 Score=78.74 Aligned_cols=200 Identities=13% Similarity=0.088 Sum_probs=132.1
Q ss_pred hcccCCcCCceeecCcccccccchhhhCCCCCCeeecccCccccc------------CchhhhccccCCeeeecCCcccc
Q 015202 13 EINNLTNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQLEGS------------IPYDLCRLAALFQLDLGDNKLSG 80 (411)
Q Consensus 13 ~~~~~~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~------------~~~~~~~l~~L~~L~l~~n~l~~ 80 (411)
.|.++ .|+.+.+..+ ++......|.++.+++.+.+..+..... ....+.....+..+.+.... ..
T Consensus 131 ~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 207 (379)
T 4h09_A 131 IFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KT 207 (379)
T ss_dssp TTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CE
T ss_pred ccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eE
Confidence 34443 4555555443 4445566788889998888775432211 11123334455555544332 22
Q ss_pred cCCccccCCccCCeeecccccCCccCc-cccCCCCCcEEEcCCCeeeecCCCCccCccCCCeEEccCCeecccCCCCccC
Q 015202 81 FVPSCFGNLTNLRKLYLGSNQLTYIPL-TLWNLKYILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMNNFSGAIPTTIGG 159 (411)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~n~l~~~p~-~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~ 159 (411)
.....+....+|+.+.+..+ +..++. .+..+..|+.+.+..+ ++......|.++..|+.+.+..+ +.......|..
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccc
Confidence 44556677778888887654 444433 4557788888888765 44455667888888888888654 44466678888
Q ss_pred CCccCeeecccccccccCCccccCCCCCCEEeCCCCccccccchhhhcCCCCCEEEcccC
Q 015202 160 LKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFN 219 (411)
Q Consensus 160 ~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n 219 (411)
+++|+.+.+.++.++.+...+|.++.+|+.+.+..+ ++.....+|..+.+|+.+.+..+
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 889999998888887677788888889999988754 55566677888888888877543
No 264
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=98.47 E-value=1.5e-07 Score=87.91 Aligned_cols=86 Identities=14% Similarity=0.166 Sum_probs=63.3
Q ss_pred CCCcCCeeeccCCceEEEEEec--------CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ--------DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~--------~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------- 376 (411)
+|.-.+.||+|+||.||+|+.. ++..||||++.... .....+|.+|++++.+
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~ 149 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 149 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCc
Confidence 3444588999999999999862 23579999996543 3345789999998876
Q ss_pred -----cccCCCC----------------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLTRE----------------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~~~----------------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....++|.++.+|+.++++||+|||+.
T Consensus 150 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 210 (382)
T 3tt0_A 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 210 (382)
T ss_dssp CEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC
Confidence 2221100 113499999999999999999999964
No 265
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=98.47 E-value=1.5e-07 Score=84.54 Aligned_cols=82 Identities=17% Similarity=0.261 Sum_probs=61.2
Q ss_pred CCeeeccCCceEEEEEecC-CC---EEEEEEEeccc-chhhHhHHHHHHHHHH------------------------ccc
Q 015202 329 NNIIGRGGIGSIYKARIQD-GM---EVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------ANL 379 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~-~~---~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------~~l 379 (411)
.++||+|+||.||+|...+ +. .||||.+.... ....+.|.+|+.++.+ ++.
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 105 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYM 105 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCC
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecc
Confidence 3789999999999998632 22 69999995433 3445789999999987 111
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....++|.++..|+.++++||+|||+.
T Consensus 106 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 143 (298)
T 3pls_A 106 CHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ 143 (298)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111 134589999999999999999999964
No 266
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=98.47 E-value=9.1e-08 Score=87.77 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=65.3
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||++... +|+.||||.+.... ......+.+|++++..
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 34556689999999999999874 68899999995432 2335678999999886
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.+...++.+|++||+|||+.
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR 124 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3322211 123488889999999999999999964
No 267
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=98.46 E-value=6.7e-08 Score=87.68 Aligned_cols=97 Identities=18% Similarity=0.312 Sum_probs=69.5
Q ss_pred ccHHHHHHHhcCCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEecccc-hhhHhHHHHHHHHHH----------
Q 015202 314 FTYLELFHATNGFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD---------- 376 (411)
Q Consensus 314 ~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~---------- 376 (411)
+...+.....++|.-.+.||+|+||.||+|.. .+++.||||.+..... ...+.|.+|++++.+
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34444444556676778999999999999985 3457899999965433 345679999998876
Q ss_pred ------------------------cccCCCCC-------------CCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------------------------ANLLTRED-------------KHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------------------------~~l~~~~~-------------~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++..... ...+++..+..++.++++||+|||+.
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 167 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR 167 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC
Confidence 11111110 11278999999999999999999964
No 268
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=98.46 E-value=1.5e-07 Score=85.13 Aligned_cols=88 Identities=19% Similarity=0.148 Sum_probs=62.2
Q ss_pred hcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc-----hhhHhHHHHHHHHHH--------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR-----EAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~-----~~~~~f~~e~~~~~~-------------------- 376 (411)
+++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 55677778999999999999985 5688999999853221 113467777776654
Q ss_pred -----------cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----------ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----------~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+. .....+++.++..|+.++++||+|||+.
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 139 (308)
T 3g33_A 88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 139 (308)
T ss_dssp SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111110 0122389999999999999999999964
No 269
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=98.46 E-value=1.1e-07 Score=87.72 Aligned_cols=88 Identities=14% Similarity=0.174 Sum_probs=65.4
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH----------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~---------------------- 376 (411)
.++|.-.+.||+|+||.||+|+.. +|+.||||++.... ......+..|.+++..
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 356666789999999999999874 58899999995432 2234568888888875
Q ss_pred --cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.+...++.+|+.||+|||+.
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 143 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK 143 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332211 123588999999999999999999964
No 270
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=98.46 E-value=8.5e-08 Score=87.60 Aligned_cols=52 Identities=25% Similarity=0.421 Sum_probs=41.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~ 376 (411)
+|...+.||+|+||.||+|+.. +|+.||||++.... ....+.|.+|++++.+
T Consensus 7 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~ 60 (332)
T 3qd2_B 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAK 60 (332)
T ss_dssp HEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTS
T ss_pred cCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHh
Confidence 4555689999999999999985 78999999996433 3345789999999886
No 271
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=98.46 E-value=1.2e-07 Score=87.34 Aligned_cols=90 Identities=11% Similarity=0.165 Sum_probs=65.9
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH--------------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-------------------- 376 (411)
...++|.-.+.||+|+||.||+|... +|+.||||++.... ......+..|.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 34566777789999999999999984 57899999995432 2234567888888764
Q ss_pred ----cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.+...++.+|++||+|||+.
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 137 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK 137 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332221 123588999999999999999999964
No 272
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=98.45 E-value=4.9e-08 Score=90.45 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=71.5
Q ss_pred cccccHHHHHHHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------
Q 015202 311 QRRFTYLELFHATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 311 ~~~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------- 376 (411)
...+++.+.....++|.-.+.||+|+||.||+|+. .+|..||||++... ....+.+..|++++..
T Consensus 22 ~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 22 IVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred ceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 33445555555567777789999999999999987 56789999999532 2334667778887765
Q ss_pred ---------------cccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------------ANLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------------~~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. +.. ....+++.....|+.++++||+|||+.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM 156 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222 111 123489999999999999999999964
No 273
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=98.45 E-value=3.1e-08 Score=88.66 Aligned_cols=86 Identities=12% Similarity=0.190 Sum_probs=65.6
Q ss_pred hcCCCcCCeeeccCCceEEEEEecC-CCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cc
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQD-GMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~-~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
.++|...+.||+|+||.||+|+..+ +..||||.+... ....+.|.+|++++.+ ++
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3445556899999999999999854 778999999543 3345789999999987 22
Q ss_pred cCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 379 LLTRE--------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 379 l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
..+.. ....+++..+..|+.++++||+|||+
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH
Confidence 21111 12358999999999999999999996
No 274
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=98.45 E-value=9.7e-08 Score=86.49 Aligned_cols=87 Identities=21% Similarity=0.292 Sum_probs=64.1
Q ss_pred cCCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEecccc-hhhHhHHHHHHHHHH--------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~-------------------- 376 (411)
++|.-.+.||+|+||.||+|+. .++..||||++..... ...+.|.+|++++.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 102 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPT 102 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCc
Confidence 3444558999999999999985 3457899999965433 345779999998876
Q ss_pred -------------cccCCCC---------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -------------ANLLTRE---------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -------------~~l~~~~---------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.... ...+++|..+.+++.++++||+|||+.
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 164 (313)
T 1t46_A 103 LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164 (313)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1111110 012489999999999999999999964
No 275
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=98.45 E-value=5.4e-08 Score=86.92 Aligned_cols=87 Identities=14% Similarity=0.093 Sum_probs=65.8
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecc--cchhhHhHHHHHHHHHH------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~------------------------ 376 (411)
++|...+.||+|+||.||+|... +|+.||||++... ......++.+|+..+.+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~ 90 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN 90 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 44556689999999999999984 6899999998643 23345778899988875
Q ss_pred cccCCCC----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++....+|+.++++||+|||+.
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 134 (289)
T 1x8b_A 91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134 (289)
T ss_dssp ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2222211 013489999999999999999999964
No 276
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=98.45 E-value=4.8e-08 Score=92.02 Aligned_cols=95 Identities=13% Similarity=0.100 Sum_probs=69.8
Q ss_pred HHHHHHHhcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH---------------
Q 015202 316 YLELFHATNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD--------------- 376 (411)
Q Consensus 316 ~~~l~~at~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~--------------- 376 (411)
+.+++...++|.-.+.||+|+||.||+|... +|+.||||++.... ......|.+|+.++..
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556677877899999999999999984 57899999995422 2223568899999887
Q ss_pred --------cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|+.||+|||+.
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~ 187 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM 187 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222111 112478888999999999999999964
No 277
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=98.45 E-value=1.5e-07 Score=84.18 Aligned_cols=85 Identities=11% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------cccC
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
|.-.+.||+|+||.||++.. .+|..||||++.... ....+.|.+|++++.+ ++..
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 103 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE 103 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCC
Confidence 44558999999999999987 467899999996543 2345789999999987 2222
Q ss_pred CCC----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. .+..+++....+|+.++++||+|||+.
T Consensus 104 ~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 143 (285)
T 3is5_A 104 GGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143 (285)
T ss_dssp CCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 211 124589999999999999999999963
No 278
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=98.45 E-value=2.3e-07 Score=83.29 Aligned_cols=85 Identities=16% Similarity=0.127 Sum_probs=62.5
Q ss_pred hcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------c
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------A 377 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~ 377 (411)
.++|...+.||+|+||.||+|+. .+++.||||.+.... ...++..|++++.. +
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 45677778999999999999986 578899999874332 23468888888876 2
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+. +.. ....+++..+..|+.++++||+|||+.
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 124 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK 124 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22 111 134599999999999999999999964
No 279
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=98.44 E-value=1.9e-07 Score=82.95 Aligned_cols=87 Identities=11% Similarity=0.160 Sum_probs=56.0
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++.+
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 3455668999999999999986 568899999985432 2235678999999887
Q ss_pred cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++....+|+.++++||.|||+.
T Consensus 93 e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 131 (275)
T 2eue_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH 131 (275)
T ss_dssp ECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2211000 123589999999999999999999964
No 280
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=98.44 E-value=1.7e-07 Score=85.43 Aligned_cols=85 Identities=16% Similarity=0.252 Sum_probs=64.6
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch------hhHhHHHHHHHHHH----------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE------AFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~------~~~~f~~e~~~~~~---------------------- 376 (411)
|.-.+.||+|+||.||+|... +|..||||.+...... ...+|.+|+.++.+
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (321)
T 2a2a_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLI 93 (321)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 445589999999999999874 6889999998543321 25679999999987
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++..+..|+.++++||+|||+.
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 134 (321)
T 2a2a_A 94 LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK 134 (321)
T ss_dssp ECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2222211 123588999999999999999999964
No 281
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=98.44 E-value=1.6e-07 Score=84.46 Aligned_cols=85 Identities=15% Similarity=0.242 Sum_probs=64.2
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
|.-.+.||+|+||.||+|+. ..+..||||.+.... ....+.|.+|+.++.+ +|
T Consensus 13 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 92 (294)
T 4eqm_A 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEY 92 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeC
Confidence 44458999999999999986 468899999984332 2334679999999887 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ...++++.....++.++++||+|||+.
T Consensus 93 ~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 130 (294)
T 4eqm_A 93 IEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130 (294)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22211 123589999999999999999999964
No 282
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=98.44 E-value=2.8e-07 Score=83.91 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=64.6
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|.-.+.||+|+||.||++... +|..||+|.+... ......+.+|+.++.. +|..
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4445588999999999999874 5778999998543 2345678999999987 2222
Q ss_pred CCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++.....|+.++++||+|||+.
T Consensus 85 g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 121 (321)
T 1tki_A 85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121 (321)
T ss_dssp CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 211 123589999999999999999999964
No 283
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=98.44 E-value=1.4e-07 Score=83.85 Aligned_cols=87 Identities=18% Similarity=0.334 Sum_probs=65.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc---hhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||+|+. .+|+.||||.+..... ...+.|.+|++++.+
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 3455568999999999999987 5789999999954321 224679999999886
Q ss_pred cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ...++++..+..|+.++++||+|||+.
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 131 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH 131 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2221111 124589999999999999999999964
No 284
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=98.43 E-value=1.4e-07 Score=89.56 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=61.8
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------------- 376 (411)
|...+.||+|+||.||+|... .++.||||++... ....+++..|++++..
T Consensus 99 y~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv 177 (429)
T 3kvw_A 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177 (429)
T ss_dssp EEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEE
T ss_pred EEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEE
Confidence 445589999999999999874 5789999999543 2334678888887775
Q ss_pred -cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 -ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 -~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+++... .....++|..+.+|+.+|++||+|||+
T Consensus 178 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 218 (429)
T 3kvw_A 178 FELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218 (429)
T ss_dssp ECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111110 012348999999999999999999996
No 285
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=98.43 E-value=9.9e-08 Score=84.94 Aligned_cols=85 Identities=15% Similarity=0.198 Sum_probs=64.7
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------------------- 376 (411)
+|.-.+.||+|+||.||++... +|+.||||.+.... ....+.|.+|++++.+
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 4445588999999999999874 68899999996433 3345779999999987
Q ss_pred cccCCCC----------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 ANLLTRE----------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 ~~l~~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+|..+.. ....++|..+.+|+.++++||+|||+
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 2211110 12348999999999999999999996
No 286
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=98.43 E-value=1.4e-07 Score=84.90 Aligned_cols=85 Identities=15% Similarity=0.240 Sum_probs=62.4
Q ss_pred CCcCCeeeccCCceEEEEEe-----cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------
Q 015202 326 FSANNIIGRGGIGSIYKARI-----QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-----~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------------------- 376 (411)
|...+.||+|+||.||+|++ .+|+.||||++.... ......|.+|++++.+
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 102 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEE
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEE
Confidence 33457899999999999985 357899999996433 3345789999999987
Q ss_pred --cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.++..|+.++++||+|||+.
T Consensus 103 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 145 (302)
T 4e5w_A 103 IMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR 145 (302)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 2221111 123489999999999999999999964
No 287
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=98.43 E-value=2.8e-07 Score=82.56 Aligned_cols=81 Identities=16% Similarity=0.126 Sum_probs=61.7
Q ss_pred CeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH---------------------------ccc
Q 015202 330 NIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD---------------------------ANL 379 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~---------------------------~~l 379 (411)
..||+|+||.||+|.. .++..||+|.+.... ....+.|.+|+.++.+ ++.
T Consensus 32 ~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 111 (290)
T 1t4h_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELM 111 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECC
T ss_pred eeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEec
Confidence 5799999999999987 457789999985432 3345779999999987 111
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.....|+.++++||+|||+.
T Consensus 112 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 148 (290)
T 1t4h_A 112 TSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR 148 (290)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 1111 113488999999999999999999974
No 288
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=98.43 E-value=1.4e-07 Score=85.24 Aligned_cols=86 Identities=14% Similarity=0.180 Sum_probs=62.6
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|.-.+.||+|+||.||++... +|+.||||.+..........|.+|+.++.+ ++..
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (304)
T 2jam_A 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS 89 (304)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCC
Confidence 3445589999999999999874 688999999975544445679999999987 2222
Q ss_pred CCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++.....++.++++||+|||+.
T Consensus 90 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (304)
T 2jam_A 90 GGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125 (304)
T ss_dssp SCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 122478899999999999999999963
No 289
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=98.43 E-value=9.6e-08 Score=86.88 Aligned_cols=87 Identities=17% Similarity=0.172 Sum_probs=54.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc-hhhHhHHHHHHHHHH-----------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|++++.+ ++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 84 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEF 84 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEEC
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEe
Confidence 4566668999999999999987 4588999999965432 234678999999987 22
Q ss_pred cCC--------C---CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLT--------R---EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~--------~---~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+ . .....+++.....++.++++||+|||+.
T Consensus 85 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 127 (317)
T 2pmi_A 85 MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127 (317)
T ss_dssp CCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 211 0 0113488999999999999999999964
No 290
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=98.42 E-value=6.5e-08 Score=88.18 Aligned_cols=89 Identities=18% Similarity=0.329 Sum_probs=60.8
Q ss_pred HhcCCCcCCeeeccCCceEEEEEecCC----CEEEEEEEecc--cchhhHhHHHHHHHHHH-------------------
Q 015202 322 ATNGFSANNIIGRGGIGSIYKARIQDG----MEVAVKVFDLQ--YREAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 322 at~~f~~~~~lg~g~~g~vy~g~l~~~----~~vavk~l~~~--~~~~~~~f~~e~~~~~~------------------- 376 (411)
..++|.-.+.||+|+||.||+|..... ..||||.+... .....++|.+|++++.+
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 345566678999999999999987432 27999998543 33446789999999986
Q ss_pred ----------cccCCCC------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------ANLLTRE------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------~~l~~~~------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.++.+|+.++++||+|||+.
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~ 156 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR 156 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC
Confidence 1111100 011488999999999999999999963
No 291
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=98.42 E-value=1.6e-07 Score=83.73 Aligned_cols=85 Identities=15% Similarity=0.226 Sum_probs=64.4
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch------hhHhHHHHHHHHHH----------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE------AFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~------~~~~f~~e~~~~~~---------------------- 376 (411)
|.-.+.||+|+||.||++... +|+.||||.+...... ..+.|.+|+.++.+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 86 (283)
T 3bhy_A 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLI 86 (283)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEE
Confidence 445588999999999999985 5889999998543211 25679999999987
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++..+..|+.++++||+|||+.
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 127 (283)
T 3bhy_A 87 LELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK 127 (283)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2222111 123589999999999999999999963
No 292
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=98.42 E-value=2e-07 Score=85.37 Aligned_cols=82 Identities=22% Similarity=0.246 Sum_probs=58.4
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------------- 376 (411)
+|.-.+.||+|+||.||+|.. +++.||||++.... ...+..|.++...
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 444558999999999999988 77999999995432 3455555555432
Q ss_pred --cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. .....+|..+.+|+.++++||+|||+.
T Consensus 90 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~ 130 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTE 130 (336)
T ss_dssp EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred EEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhh
Confidence 1111111 112468899999999999999999975
No 293
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=98.42 E-value=1.8e-07 Score=86.93 Aligned_cols=87 Identities=16% Similarity=0.133 Sum_probs=60.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc--cchhhHhHHHHHHHHHH----------cc------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD----------AN------------ 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~----------~~------------ 378 (411)
+.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++.. ++
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 4455668999999999999985 56889999998543 22345778999999987 10
Q ss_pred -----------cCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 -----------LLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 -----------l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|+.......+++.....++.+|++||+|||+.
T Consensus 109 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 151 (367)
T 2fst_X 109 VYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA 151 (367)
T ss_dssp CEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01111123589999999999999999999963
No 294
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=98.42 E-value=2.5e-07 Score=82.11 Aligned_cols=86 Identities=16% Similarity=0.131 Sum_probs=65.4
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|.-.+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|+.++.. ++.
T Consensus 8 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (276)
T 2yex_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (276)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEec
Confidence 3455588999999999999874 68899999996443 2345779999999886 222
Q ss_pred CC-----CC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LT-----RE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~-----~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+ .. ....+++.....++.++++||+|||+.
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 124 (276)
T 2yex_A 88 SGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124 (276)
T ss_dssp TTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11 11 123589999999999999999999964
No 295
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=98.42 E-value=2.3e-07 Score=82.72 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=64.1
Q ss_pred cCCCcCCeeeccCCceEEEEEecC----CCEEEEEEEeccc-chhhHhHHHHHHHHHH----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQD----GMEVAVKVFDLQY-REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~----~~~vavk~l~~~~-~~~~~~f~~e~~~~~~---------------------- 376 (411)
++|.-.+.||+|+||.||+|+..+ +..||||.+.... ....+.|.+|++++.+
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~ 91 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIM 91 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEEE
Confidence 445556899999999999998743 2359999986543 3345789999999987
Q ss_pred cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....++.++++||+|||+.
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 132 (281)
T 3cc6_A 92 ELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI 132 (281)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2221111 123489999999999999999999964
No 296
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=98.42 E-value=7.8e-08 Score=87.16 Aligned_cols=86 Identities=17% Similarity=0.252 Sum_probs=63.2
Q ss_pred CCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH---------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~--------------------- 376 (411)
+|.-.+.||+|+||.||+|+. .++..||||.+.... ....+.|.+|++++.+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 103 (314)
T 2ivs_A 24 NLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLL 103 (314)
T ss_dssp GEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred heeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEE
Confidence 344557899999999999986 234789999996433 3345789999999986
Q ss_pred --ccc---------CCCC---------------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANL---------LTRE---------------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l---------~~~~---------------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. .... ....+++.++.+|+.++++||+|||+.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 169 (314)
T 2ivs_A 104 IVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM 169 (314)
T ss_dssp EEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 1110 012389999999999999999999964
No 297
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=98.41 E-value=2.5e-07 Score=83.47 Aligned_cols=87 Identities=10% Similarity=0.094 Sum_probs=65.9
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc----chhhHhHHHHHHHHHH----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY----REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~----~~~~~~f~~e~~~~~~---------------------- 376 (411)
++|.-.+.||+|+||.||++.. .++..||||.+.... ......|.+|+.++.+
T Consensus 5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (305)
T 2wtk_C 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY 84 (305)
T ss_dssp CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence 4566678999999999999987 467899999995432 2335779999999987
Q ss_pred ---cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.... .....+++..+.+|+.++++||+|||+.
T Consensus 85 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~ 128 (305)
T 2wtk_C 85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ 128 (305)
T ss_dssp EEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0123589999999999999999999964
No 298
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=98.41 E-value=2.6e-07 Score=85.79 Aligned_cols=90 Identities=18% Similarity=0.245 Sum_probs=66.6
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc--------hhhHhHHHHHHHHHH---------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR--------EAFKSFDNEFMTVVD--------------- 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~--------~~~~~f~~e~~~~~~--------------- 376 (411)
...++|...+.||+|+||.||+|... +|+.||||++..... ...+.|.+|+.++.+
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34455666789999999999999984 689999999865431 113568888888775
Q ss_pred ---------cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....|+.+|++||.|||+.
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 219 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3332211 113589999999999999999999964
No 299
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=98.41 E-value=1.8e-07 Score=87.13 Aligned_cols=82 Identities=23% Similarity=0.370 Sum_probs=60.7
Q ss_pred CCeeeccCCceEEEEEec--CC--CEEEEEEEeccc-chhhHhHHHHHHHHHH------------------------ccc
Q 015202 329 NNIIGRGGIGSIYKARIQ--DG--MEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------ANL 379 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~--~~--~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------~~l 379 (411)
.+.||+|+||.||+|.+. ++ ..||||.+.... ....++|.+|+.++.+ +|.
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~ 173 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 173 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECC
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECC
Confidence 368999999999999873 22 358999985433 3446789999998887 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....++|..+..|+.+||+||+|||+.
T Consensus 174 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 211 (373)
T 3c1x_A 174 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 211 (373)
T ss_dssp TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1111 123488999999999999999999964
No 300
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=98.41 E-value=1.1e-07 Score=86.00 Aligned_cols=86 Identities=19% Similarity=0.246 Sum_probs=63.4
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc---cchhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ---YREAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~---~~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|.. .+|..||||++... ......+|.+|++++.+ +
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 455568999999999999986 57899999999642 23345779999999987 2
Q ss_pred ccCCCC----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..... ....+++....+|+.++++||.|||+.
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 155 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR 155 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 222111 123488999999999999999999964
No 301
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=98.41 E-value=1.6e-07 Score=86.68 Aligned_cols=87 Identities=14% Similarity=0.171 Sum_probs=65.0
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH----------cccCCC-----C---
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------ANLLTR-----E--- 383 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------~~l~~~-----~--- 383 (411)
++|.-.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++.+ ++.... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 90 (353)
T 2b9h_A 11 SDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVY 90 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEE
T ss_pred cceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEE
Confidence 45556689999999999999974 58899999996433 2335678999999987 100000 0
Q ss_pred --------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 --------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 --------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
....+++.....++.++++||+|||+.
T Consensus 91 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 91 IIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp EEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012488999999999999999999964
No 302
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=98.41 E-value=1.9e-07 Score=84.48 Aligned_cols=85 Identities=20% Similarity=0.253 Sum_probs=63.2
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------------------ccc
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------------------ANL 379 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------------------~~l 379 (411)
++|.-.+.||+|+||.||+|... ..+|||.++... ....+.|.+|++++.+ ++.
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~ 113 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEecC
Confidence 34455588999999999999864 368999885432 3345789999999987 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.++..|+.++|+||+|||+.
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 151 (307)
T 3lb7_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK 151 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2111 123589999999999999999999963
No 303
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=98.41 E-value=2.7e-07 Score=83.95 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=64.9
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||++... +|+.||||.+.... ....+.+.+|+.++..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 34555689999999999999874 68899999995432 2234668889988886
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|++||+|||+.
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 125 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK 125 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123588899999999999999999974
No 304
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=98.41 E-value=2e-07 Score=83.06 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=63.2
Q ss_pred CCCcCCeeeccCCceEEEEEecC----CCEEEEEEEeccc-chhhHhHHHHHHHHHH----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQD----GMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~----~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------------------~ 377 (411)
.|.-.+.||+|+||.||+|.... +..||||++.... ....+.|.+|+.++.+ +
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv~e 95 (281)
T 1mp8_A 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIME 95 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred HeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEEEe
Confidence 34445889999999999998732 4469999985433 3345679999999986 2
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..... ....++|..+..++.++++||+|||+.
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 135 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK 135 (281)
T ss_dssp CCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 221111 123589999999999999999999964
No 305
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=98.41 E-value=4e-07 Score=81.85 Aligned_cols=82 Identities=22% Similarity=0.348 Sum_probs=60.5
Q ss_pred CCeeeccCCceEEEEEecCC----CEEEEEEEecccc-hhhHhHHHHHHHHHH------------------------ccc
Q 015202 329 NNIIGRGGIGSIYKARIQDG----MEVAVKVFDLQYR-EAFKSFDNEFMTVVD------------------------ANL 379 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~----~~vavk~l~~~~~-~~~~~f~~e~~~~~~------------------------~~l 379 (411)
.+.||+|+||.||+|+..+. ..||||.+..... ...+.|.+|++++.+ ++.
T Consensus 30 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~ 109 (298)
T 3f66_A 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM 109 (298)
T ss_dssp EEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECC
T ss_pred cceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCC
Confidence 47899999999999987332 2589999865333 345789999999987 222
Q ss_pred CCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++..+.+|+.++++||+|||+.
T Consensus 110 ~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~ 147 (298)
T 3f66_A 110 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK 147 (298)
T ss_dssp TTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111 123488999999999999999999964
No 306
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=98.41 E-value=2e-07 Score=85.75 Aligned_cols=86 Identities=14% Similarity=0.193 Sum_probs=63.8
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~------------------------ 376 (411)
+|...+.||+|+||.||++... +|+.||||++.... ....+.+..|..++.+
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 4555689999999999999984 57889999996432 2234568889988865
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|++||+|||+.
T Consensus 90 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 129 (345)
T 3a8x_A 90 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 129 (345)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 113488999999999999999999964
No 307
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=98.40 E-value=1.5e-07 Score=86.66 Aligned_cols=89 Identities=16% Similarity=0.231 Sum_probs=61.1
Q ss_pred HhcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch-----hhHhHHHHHHHHHH-------------------
Q 015202 322 ATNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE-----AFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 322 at~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~-----~~~~f~~e~~~~~~------------------- 376 (411)
..+.|...+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++.+
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3456777789999999999999874 5889999998543211 13578899999987
Q ss_pred ----cccCC------CCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLT------REDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~------~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+ ......+++.....++.++++||+|||+.
T Consensus 88 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 131 (346)
T 1ua2_A 88 SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131 (346)
T ss_dssp EEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11111 00123588899999999999999999964
No 308
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=98.40 E-value=1.8e-07 Score=87.70 Aligned_cols=85 Identities=14% Similarity=0.109 Sum_probs=65.1
Q ss_pred CCcCCeeecc--CCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 326 FSANNIIGRG--GIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 326 f~~~~~lg~g--~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
|.-.+.||+| +||.||+|... +|+.||||++.... ....+.|.+|++++.+ +
T Consensus 27 y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 106 (389)
T 3gni_B 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTS 106 (389)
T ss_dssp EEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEE
Confidence 4455899999 99999999984 68999999996433 3335678899999987 2
Q ss_pred ccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++.....|+.++++||+|||+.
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 147 (389)
T 3gni_B 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 147 (389)
T ss_dssp CCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 222111 124589999999999999999999964
No 309
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=98.40 E-value=1.9e-07 Score=89.46 Aligned_cols=87 Identities=15% Similarity=0.235 Sum_probs=56.7
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------cccCCC--------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------ANLLTR-------- 382 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~~l~~~-------- 382 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++.... ....+.|.+|++++.+ ++....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 4455668999999999999986 468899999995432 2345779999999987 111000
Q ss_pred ---------C------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 ---------E------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ---------~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++.....|+.+|++||+|||+.
T Consensus 133 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (458)
T 3rp9_A 133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175 (458)
T ss_dssp EEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0 123489999999999999999999964
No 310
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=98.40 E-value=1.9e-07 Score=87.18 Aligned_cols=86 Identities=19% Similarity=0.241 Sum_probs=64.7
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||++... +|+.||||.+.... ....+.+.+|++++.. +
T Consensus 16 ~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e 95 (384)
T 4fr4_A 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVD 95 (384)
T ss_dssp GEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 3445589999999999999874 57889999995432 2335678999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....+++.....++.+++.||.|||+.
T Consensus 96 ~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 134 (384)
T 4fr4_A 96 LLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ 134 (384)
T ss_dssp CCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222111 123589999999999999999999964
No 311
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=98.40 E-value=2.3e-07 Score=90.74 Aligned_cols=87 Identities=15% Similarity=0.205 Sum_probs=66.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|...++||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++.+
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 4466668999999999999988 468999999995432 2234668999999987
Q ss_pred cccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. +...+++.+...++.+|++||+|||+.
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~ 305 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332211 123489999999999999999999964
No 312
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=98.40 E-value=2.1e-07 Score=83.59 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=64.0
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
|...+.||+|+||.||++... +++.||+|.+.... ....+.|.+|+.++.. ++
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 96 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLEL 96 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEec
Confidence 444589999999999999984 47889999985432 2345679999999886 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.++..|+.++++||+|||+.
T Consensus 97 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 134 (294)
T 2rku_A 97 CRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134 (294)
T ss_dssp CTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22111 113589999999999999999999964
No 313
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=98.40 E-value=2.7e-07 Score=83.61 Aligned_cols=87 Identities=20% Similarity=0.326 Sum_probs=61.2
Q ss_pred cCCCcCCeeeccCCceEEEEEec----CCCEEEEEEEecc--cchhhHhHHHHHHHHHH---------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ----DGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~----~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~--------------------- 376 (411)
++|.-.+.||+|+||.||+|... .+..||||++... .....+.|.+|+.++.+
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 113 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGI 113 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC------
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCC
Confidence 34445578999999999999873 2347999998543 23345779999999886
Q ss_pred -------cccCCC------------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -------ANLLTR------------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -------~~l~~~------------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.... .....+++..+.+|+.++++||.|||+.
T Consensus 114 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 166 (313)
T 3brb_A 114 PKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR 166 (313)
T ss_dssp -CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111110 1124589999999999999999999974
No 314
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=98.39 E-value=2e-07 Score=85.21 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=63.8
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc--hhhHhHHHHHHHHHH-----------------------ccc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
|...+.||+|+||.||+|... +|..||||++..... ...+.+.+|++++.+ ++.
T Consensus 27 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 106 (331)
T 4aaa_A 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106 (331)
T ss_dssp EEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred heeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecC
Confidence 344579999999999999984 488999999854332 234668899999987 221
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++....+|+.++++||+|||+.
T Consensus 107 ~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 143 (331)
T 4aaa_A 107 DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH 143 (331)
T ss_dssp SEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1100 123589999999999999999999964
No 315
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=98.39 E-value=2.2e-07 Score=88.32 Aligned_cols=87 Identities=20% Similarity=0.316 Sum_probs=65.1
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------cccCCC--------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------ANLLTR-------- 382 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~~l~~~-------- 382 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++.+ ++....
T Consensus 26 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~ 105 (432)
T 3n9x_A 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDEL 105 (432)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeE
Confidence 3455568999999999999987 457889999995432 2345789999999987 110000
Q ss_pred ---------C------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 ---------E------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ---------~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++.....|+.+|++||+|||+.
T Consensus 106 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~ 148 (432)
T 3n9x_A 106 YIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES 148 (432)
T ss_dssp EEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 123489999999999999999999964
No 316
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=98.39 E-value=1.7e-07 Score=87.74 Aligned_cols=87 Identities=13% Similarity=0.192 Sum_probs=63.6
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.++||+|+||.||+++.. +++.||||++.... ......+..|..++.+
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV 131 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 131 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence 34556689999999999999984 56789999996432 2223568888888764
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|+.||+|||+.
T Consensus 132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 172 (396)
T 4dc2_A 132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER 172 (396)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332221 123589999999999999999999964
No 317
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=98.39 E-value=3.3e-07 Score=83.64 Aligned_cols=87 Identities=16% Similarity=0.239 Sum_probs=62.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe------cCCCEEEEEEEecc-cchhhHhHHHHHHHHHH--------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI------QDGMEVAVKVFDLQ-YREAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l------~~~~~vavk~l~~~-~~~~~~~f~~e~~~~~~-------------------- 376 (411)
++|.-.+.||+|+||.||+|.. .++..||||++... ......+|.+|+.++.+
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 109 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence 3455568999999999999985 34678999999543 33445789999999887
Q ss_pred ------------cccCCCC----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------------ANLLTRE----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------------~~l~~~~----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++.... ....++|..+.+|+.++++||.|||+.
T Consensus 110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~ 159 (327)
T 2yfx_A 110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN 159 (327)
T ss_dssp EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC
Confidence 2222111 113489999999999999999999964
No 318
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=98.39 E-value=1.3e-07 Score=86.76 Aligned_cols=86 Identities=14% Similarity=0.133 Sum_probs=62.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH------------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------~ 377 (411)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....++..|+..+.+ +
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 4455567899999999999986 578899999995432 3344567777766433 2
Q ss_pred ccCCC---------CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTR---------EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~---------~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
|..+. .....++|.....|+.+|++||+|||+
T Consensus 131 ~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~ 171 (340)
T 3an0_A 131 LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171 (340)
T ss_dssp CCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 22110 013468999999999999999999995
No 319
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=98.39 E-value=1.6e-07 Score=84.42 Aligned_cols=86 Identities=22% Similarity=0.225 Sum_probs=62.5
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------cc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
+|...+.||+|+||.||+|... +|+.||||++.... ......+.+|++++.+ ++
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (299)
T 2r3i_A 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 83 (299)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEc
Confidence 4555689999999999999874 68899999985432 2234678999999987 22
Q ss_pred cCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+. .....+++....+|+.++++||+|||+.
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (299)
T 2r3i_A 84 LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122 (299)
T ss_dssp CSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2110 0123488999999999999999999964
No 320
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=98.39 E-value=1.8e-07 Score=83.74 Aligned_cols=85 Identities=11% Similarity=-0.014 Sum_probs=61.7
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc---hhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~-----------------------~ 377 (411)
.|.-.+.||+|+||.||+|+.. .|+.||||.+..... ...+.|.+|+..+.+ +
T Consensus 32 ~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 111 (286)
T 3uqc_A 32 RYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAE 111 (286)
T ss_dssp TEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEE
Confidence 3555589999999999999984 478999999964432 234789999999886 2
Q ss_pred ccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|+.+.. .. .....+..+|+.++++||+|||+.
T Consensus 112 ~~~g~~L~~~l~~-~~~~~~~~~i~~ql~~aL~~lH~~ 148 (286)
T 3uqc_A 112 WIRGGSLQEVADT-SPSPVGAIRAMQSLAAAADAAHRA 148 (286)
T ss_dssp CCCEEEHHHHHTT-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHC
Confidence 222111 11 134456789999999999999964
No 321
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=98.39 E-value=2e-07 Score=86.45 Aligned_cols=87 Identities=11% Similarity=0.167 Sum_probs=64.8
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc-hhhHhHHHHHHHHHH----------cccCCC---------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR-EAFKSFDNEFMTVVD----------ANLLTR--------- 382 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~-~~~~~f~~e~~~~~~----------~~l~~~--------- 382 (411)
+.|...+.||+|+||.||+|.. .++..||||++..... ...+.|.+|++++.+ ++....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 106 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVY 106 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEE
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEE
Confidence 3455668999999999999986 4677899999964333 334789999999987 110000
Q ss_pred --------C-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 --------E-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 --------~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++.++..|+.++++||+|||+.
T Consensus 107 iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 107 IVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp EEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 112488999999999999999999964
No 322
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=98.38 E-value=5.1e-07 Score=83.30 Aligned_cols=85 Identities=12% Similarity=0.155 Sum_probs=64.0
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-----chhhHhHHHHHHHHHH-----------------------
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-----REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-----~~~~~~f~~e~~~~~~----------------------- 376 (411)
|.-.+.||+|+||.||+|.. .+|+.||||.+.... ....+.|.+|+.++..
T Consensus 26 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 105 (351)
T 3c0i_A 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVF 105 (351)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 44558999999999999987 468899999985322 1135679999999987
Q ss_pred cccCCCC----------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE----------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~----------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. .+..+++.....|+.+|++||+|||+.
T Consensus 106 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (351)
T 3c0i_A 106 EFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149 (351)
T ss_dssp ECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332211 122478889999999999999999964
No 323
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=98.38 E-value=1.5e-07 Score=87.44 Aligned_cols=83 Identities=14% Similarity=0.203 Sum_probs=56.6
Q ss_pred hcCCCcCCeeeccCCceEEEEEecC------CCEEEEEEEecccchhhHhHHHHHHHHHH--------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQD------GMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~------~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------- 376 (411)
.++|.-.+.||+|+||.||+|...+ +..||||++.... ..+..|++++.+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~ 109 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN----GPLFTELKFYQRAAKPEQIQKWIRTRKLKYLG 109 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC----HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc----hhHHHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence 3456666899999999999998854 4689999985433 233344433332
Q ss_pred ----------------------cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------------------ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------------------~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. +.. ....++|.++.+|+.+||+||+|||+.
T Consensus 110 iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~ 171 (364)
T 3op5_A 110 VPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH 171 (364)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 000 124599999999999999999999964
No 324
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=98.38 E-value=2.4e-07 Score=84.91 Aligned_cols=86 Identities=12% Similarity=0.185 Sum_probs=64.5
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
.|...+.||+|+||.||++... +++.||+|.+.... ....+.|.+|+.++.+ +
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 3445589999999999999874 47789999985432 2345679999999886 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....+++.++..|+.++++||+|||+.
T Consensus 122 ~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 160 (335)
T 2owb_A 122 LCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160 (335)
T ss_dssp CCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222111 113589999999999999999999964
No 325
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=98.38 E-value=3.1e-07 Score=82.50 Aligned_cols=87 Identities=16% Similarity=0.154 Sum_probs=64.4
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---------chhhHhHHHHHHHHHH-----------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---------REAFKSFDNEFMTVVD----------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---------~~~~~~f~~e~~~~~~----------------- 376 (411)
++|...+.||+|+||.||+|... +|+.||||.+.... ....+.+.+|++++.+
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (298)
T 1phk_A 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN 96 (298)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred hccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccC
Confidence 44555689999999999999984 57899999995432 1124568899998875
Q ss_pred -------cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -------ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -------~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....|+.++++||+|||+.
T Consensus 97 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 143 (298)
T 1phk_A 97 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143 (298)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222111 123588999999999999999999964
No 326
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=98.37 E-value=3.1e-07 Score=84.71 Aligned_cols=86 Identities=13% Similarity=0.122 Sum_probs=62.9
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CC-CEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DG-MEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~-~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
++|.-.+.||+|+||.||+|... ++ ..||||++... ......+..|++++.+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 34555689999999999999863 33 68999999543 2335678888888776
Q ss_pred ----cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.... ....++++.+..+|+.+|++||+|||+.
T Consensus 98 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~ 142 (355)
T 2eu9_A 98 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN 142 (355)
T ss_dssp EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111110 0123589999999999999999999974
No 327
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=98.37 E-value=2.9e-07 Score=84.05 Aligned_cols=87 Identities=17% Similarity=0.236 Sum_probs=63.1
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCE----EEEEEEecc-cchhhHhHHHHHHHHHH---------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGME----VAVKVFDLQ-YREAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~----vavk~l~~~-~~~~~~~f~~e~~~~~~--------------------- 376 (411)
++|...+.||+|+||.||+|.. .++.. ||+|.+... .....+.|.+|+.++.+
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 3455568999999999999986 34443 577777433 33456789999999987
Q ss_pred -cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ....+++..+.+|+.++++||+|||+.
T Consensus 95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 136 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR 136 (327)
T ss_dssp ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 1111111 123589999999999999999999964
No 328
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=98.37 E-value=1.4e-07 Score=84.97 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=56.0
Q ss_pred cCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------- 376 (411)
++|.-.+.||+|+||.||+|.. +|+.||||++... ....+..|.+++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 3455668999999999999998 5899999998532 34567778877764
Q ss_pred --cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccC
Q 015202 377 --ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVES 408 (411)
Q Consensus 377 --~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh 408 (411)
+|..... ....++|..+.+|+.++|+||+|||
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH 117 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 117 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CC
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHH
Confidence 1111111 1124788889999999999999999
No 329
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=98.37 E-value=1.1e-07 Score=87.93 Aligned_cols=87 Identities=15% Similarity=0.195 Sum_probs=63.5
Q ss_pred cCCCcCCeeeccCCceEEEEEe----cCCCEEEEEEEeccc----chhhHhHHHHHHHHHH-------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI----QDGMEVAVKVFDLQY----REAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l----~~~~~vavk~l~~~~----~~~~~~f~~e~~~~~~------------------- 376 (411)
++|...+.||+|+||.||++.. .+|+.||||++.... ......+.+|++++.+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 3455668999999999999987 468899999985322 2234567788887765
Q ss_pred -----cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|++||+|||+.
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 178 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 113488899999999999999999964
No 330
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=98.37 E-value=1.6e-07 Score=83.58 Aligned_cols=87 Identities=15% Similarity=0.195 Sum_probs=64.1
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||+|... ++..||||++.... ......+.+|++++.+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 88 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEE
Confidence 44555689999999999999874 56789999985432 1224678999999886
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ....+++..+..|+.++++||+|||+.
T Consensus 89 e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 128 (279)
T 3fdn_A 89 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128 (279)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2211111 113478899999999999999999974
No 331
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=98.37 E-value=2.8e-07 Score=85.39 Aligned_cols=85 Identities=15% Similarity=0.091 Sum_probs=64.5
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLL 380 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~ 380 (411)
.|.-.+.||+|+||.||++... +|+.||||++.... .....+.+|+.++.+ +|..
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 3445589999999999999874 68899999996432 234678899998887 3332
Q ss_pred CCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....+++.....|+.++++||+|||+.
T Consensus 100 ~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~ 135 (361)
T 3uc3_A 100 GGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135 (361)
T ss_dssp SCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 211 123488999999999999999999963
No 332
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=98.36 E-value=3.5e-07 Score=83.55 Aligned_cols=82 Identities=12% Similarity=0.181 Sum_probs=61.6
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------~~ 378 (411)
|.-.+.||+|+||.||+|.. .+|+.||||.+... ..+.+.+|++++.+ ++
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 44458999999999999986 57889999999643 24678999998886 11
Q ss_pred cCCCC---CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE---DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~---~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. .-..+++.....|+.++++||+|||+.
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 149 (330)
T 3nsz_A 115 VNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM 149 (330)
T ss_dssp CCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC
Confidence 11111 001378889999999999999999964
No 333
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=98.36 E-value=2.6e-07 Score=89.96 Aligned_cols=87 Identities=14% Similarity=0.244 Sum_probs=65.8
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|...++||+|+||.||++... +|+.||||++.... ......+..|++++.+
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 34555688999999999999984 68999999995432 2234678999999987
Q ss_pred cccCC---------CC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLT---------RE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~---------~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+ .. ....+++.....++.+|+.||+|||+.
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~ 308 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence 22221 11 123589999999999999999999964
No 334
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=98.36 E-value=1.7e-07 Score=85.58 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=58.8
Q ss_pred cCCCcCCeeeccCCceEEEEEe----cCCCEEEEEEEeccc----chhhHhHHHHHHHHHH-------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI----QDGMEVAVKVFDLQY----REAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l----~~~~~vavk~l~~~~----~~~~~~f~~e~~~~~~------------------- 376 (411)
++|...+.||+|+||.||++.. .+|+.||||++.... ......+.+|+.++.+
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 3455568999999999999987 478899999995432 2234568899999887
Q ss_pred ----cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.++++||+|||+.
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~ 140 (327)
T 3a62_A 97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK 140 (327)
T ss_dssp EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2222111 112478888999999999999999964
No 335
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=98.36 E-value=1.7e-07 Score=86.55 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=65.3
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH----------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~---------------------- 376 (411)
.++|.-.+.||+|+||.||+|... +|+.||||++.... ......+..|.+++..
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 355666789999999999999985 46789999995432 2234668889988864
Q ss_pred --cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.+...++.+|+.||+|||+.
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 140 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 140 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332211 113488999999999999999999964
No 336
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=98.36 E-value=5.9e-08 Score=88.54 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=69.2
Q ss_pred cccHHHHHHHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------
Q 015202 313 RFTYLELFHATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------- 376 (411)
Q Consensus 313 ~~~~~~l~~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------- 376 (411)
.+++.++....+.|.-.+.||+|+||.||+|.. .+|+.||||++.... .....+.+|+.++.+
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 344444455667777779999999999999997 568899999986432 335678899988875
Q ss_pred ---------------cccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------------ANLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------------~~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....|+.++++||+|||+.
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 148 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH 148 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1111100 013478888999999999999999963
No 337
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=98.36 E-value=2.8e-07 Score=86.37 Aligned_cols=86 Identities=10% Similarity=0.030 Sum_probs=63.3
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------- 376 (411)
+.|.-.+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++.+
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 3455568999999999999986 46788999999543 2335678889887765
Q ss_pred ---------cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---------ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---------~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.... .....+++.....|+.+|++||+|||+.
T Consensus 116 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 165 (397)
T 1wak_A 116 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTK 165 (397)
T ss_dssp TEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 111000 0123589999999999999999999974
No 338
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=98.36 E-value=2.3e-07 Score=84.54 Aligned_cols=89 Identities=20% Similarity=0.178 Sum_probs=63.6
Q ss_pred HhcCCCcCCeeeccCCceEEEEEe--cCCCEEEEEEEecccc--hhhHhHHHHHHHHHH---------------------
Q 015202 322 ATNGFSANNIIGRGGIGSIYKARI--QDGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 322 at~~f~~~~~lg~g~~g~vy~g~l--~~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~--------------------- 376 (411)
+.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+|+.++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 345666678999999999999997 4678899999854332 223467778776653
Q ss_pred ----------cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+. .....+++..+..|+.++++||+|||+.
T Consensus 89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111110 0122489999999999999999999964
No 339
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=98.35 E-value=1.3e-07 Score=86.39 Aligned_cols=88 Identities=16% Similarity=0.142 Sum_probs=62.9
Q ss_pred hcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc--hhhHhHHHHHHHHHH-----------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR--EAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~--~~~~~f~~e~~~~~~----------------------- 376 (411)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ...+.+.+|++++.+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 34566668999999999999985 4678999999854332 234678899999987
Q ss_pred cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....|+.++++||+|||+.
T Consensus 113 e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~ 151 (329)
T 3gbz_A 113 EYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR 151 (329)
T ss_dssp ECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2221100 123489999999999999999999964
No 340
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=98.35 E-value=3.6e-07 Score=81.90 Aligned_cols=80 Identities=15% Similarity=0.143 Sum_probs=59.1
Q ss_pred eeeccCCceEEEEEec---CCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------------------cccCCCC
Q 015202 331 IIGRGGIGSIYKARIQ---DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------------------ANLLTRE 383 (411)
Q Consensus 331 ~lg~g~~g~vy~g~l~---~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------------------~~l~~~~ 383 (411)
.||+|+||.||+|.+. .+..||||.+.... ....++|.+|++++.. ++..+..
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 103 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGP 103 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEEEEeCCCCC
Confidence 8999999999999762 35689999985432 2335789999999987 1111111
Q ss_pred ------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 ------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 ------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
....+++.....|+.++++||+|||+.
T Consensus 104 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 136 (291)
T 1xbb_A 104 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 136 (291)
T ss_dssp HHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 123489999999999999999999964
No 341
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=98.35 E-value=3.5e-07 Score=86.21 Aligned_cols=80 Identities=18% Similarity=0.180 Sum_probs=53.9
Q ss_pred CCeeeccCCceEEEEEec---CCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------cccC
Q 015202 329 NNIIGRGGIGSIYKARIQ---DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------ANLL 380 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~---~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------~~l~ 380 (411)
.++||+|+||.||+|... ++..||||++.... ....+.+|++++.+ +|..
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~ 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC
Confidence 368999999999999975 46789999995332 23578899999987 1110
Q ss_pred C--------------CCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 T--------------REDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~--------------~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+ ......+++.....|+.++++||+|||+.
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~ 147 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0 00112388999999999999999999964
No 342
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=98.35 E-value=2.3e-07 Score=85.57 Aligned_cols=86 Identities=14% Similarity=0.160 Sum_probs=64.8
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|...+.||+|+||.||++... +|..||||.+.... ....+.+.+|++++.. +
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4555689999999999999874 68899999995432 2334678999999886 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....+++.+...++.+|++||+|||+.
T Consensus 122 ~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (350)
T 1rdq_E 122 YVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160 (350)
T ss_dssp CCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 322211 113488899999999999999999964
No 343
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=98.35 E-value=2.4e-07 Score=82.83 Aligned_cols=87 Identities=14% Similarity=0.189 Sum_probs=65.9
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+.|.-.+.||+|+||.||+|... +++.||||++.... ......|.+|++++.+ +
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 101 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence 34556689999999999999874 68899999995433 2345789999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++..+.+|+.++++||+|||+.
T Consensus 102 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 140 (287)
T 2wei_A 102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140 (287)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 221111 123488999999999999999999964
No 344
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=98.35 E-value=3e-07 Score=84.13 Aligned_cols=84 Identities=13% Similarity=0.171 Sum_probs=62.8
Q ss_pred CCCcCCeeeccCCceEEEEEe--cCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI--QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l--~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------- 376 (411)
.|.-.+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++..
T Consensus 15 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred ceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 344558899999999999986 36789999999543 2335678888888775
Q ss_pred ---cccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. +.. ...++++....+|+.++++||+|||+.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 137 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN 137 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 222 111 123588999999999999999999964
No 345
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=98.35 E-value=5.1e-07 Score=86.68 Aligned_cols=85 Identities=13% Similarity=0.193 Sum_probs=64.4
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc---hhhHhHHHHHHHHHH-----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
|.-.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++.. +|
T Consensus 18 Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~ 97 (476)
T 2y94_A 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97 (476)
T ss_dssp EEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 444578999999999999874 689999999954321 224678999999886 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....|+.+|++||+|||+.
T Consensus 98 ~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 135 (476)
T 2y94_A 98 VSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135 (476)
T ss_dssp CSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 21111 123589999999999999999999974
No 346
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=98.35 E-value=4.3e-07 Score=84.87 Aligned_cols=86 Identities=14% Similarity=0.169 Sum_probs=62.8
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
.++|...+.||+|+||.||+|... +|+.||||++... .....++..|++++..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 456666789999999999999874 5788999999633 2334567777777654
Q ss_pred ----cccCCC-------CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 ----ANLLTR-------EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 ----~~l~~~-------~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
++.... .....++|..+..|+.++++||+|||.
T Consensus 132 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 175 (382)
T 2vx3_A 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT 175 (382)
T ss_dssp EEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 111110 012348999999999999999999994
No 347
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=98.35 E-value=3e-07 Score=88.18 Aligned_cols=87 Identities=13% Similarity=0.060 Sum_probs=64.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc--cchhhHhHHHHHHHHHH----------ccc-----------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD----------ANL----------- 379 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~----------~~l----------- 379 (411)
++|...+.||+|+||.||+|.- ..|+.||||++... .....+.+.+|++++.. ++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 141 (464)
T 3ttj_A 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD 141 (464)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred CCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCe
Confidence 4455668999999999999986 45789999999643 23345779999999987 110
Q ss_pred --------CCCC---CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 --------LTRE---DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 --------~~~~---~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. -...+++.++..|+.++++||+|||+.
T Consensus 142 ~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~ 183 (464)
T 3ttj_A 142 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 183 (464)
T ss_dssp EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0000 012388999999999999999999963
No 348
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=98.34 E-value=2.7e-07 Score=85.17 Aligned_cols=86 Identities=17% Similarity=0.067 Sum_probs=64.1
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~------------------------- 376 (411)
+|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|++++.+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 444568999999999999997 568899999984332 2234678899999987
Q ss_pred ------cccCCC------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTR------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+. .....+++.+...|+.++++||+|||+.
T Consensus 98 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 143 (351)
T 3mi9_A 98 SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 143 (351)
T ss_dssp EEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0123489999999999999999999964
No 349
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=98.34 E-value=4.8e-07 Score=83.53 Aligned_cols=86 Identities=15% Similarity=0.170 Sum_probs=64.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------c-------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------A------------- 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~------------- 377 (411)
++|...+.||+|+||.||+|.. .+|+.||||++.... ....+.|.+|+.++.+ +
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 3444558899999999999987 468899999995432 2335679999999987 0
Q ss_pred ------ccC----CCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 ------NLL----TREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ------~l~----~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. .. ....+++.+...|+.++++||+|||+.
T Consensus 104 ~~lv~e~~~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~LH~~ 145 (353)
T 3coi_A 104 FYLVMPFMQTDLQKI-MGLKFSEEKIQYLVYQMLKGLKYIHSA 145 (353)
T ss_dssp CEEEEECCSEEGGGT-TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeccccCCHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 000 00 122489999999999999999999964
No 350
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=98.34 E-value=3.3e-07 Score=81.32 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=64.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|+.. +|+.||||.+.... ....+.|.+|+.++.. +
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 3445589999999999999984 68999999995432 2234678999998886 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+..+.. ....+++....+++.++++||+|||+
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~ 129 (276)
T 2h6d_A 92 YVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129 (276)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 222211 11247899999999999999999996
No 351
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=98.33 E-value=1.3e-07 Score=89.60 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=59.9
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD---------------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~---------------------------- 376 (411)
|...+.||+|+||.||+|... +|+.||||++.... +.+.+|++++.+
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 444589999999999999984 58999999985432 234578888876
Q ss_pred -cccCCC---------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTR---------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~---------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+. .....++|.....++.+|++||+|||+.
T Consensus 132 ~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (420)
T 1j1b_A 132 LDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 175 (420)
T ss_dssp EECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0124588999999999999999999974
No 352
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=98.33 E-value=3.8e-07 Score=84.87 Aligned_cols=87 Identities=15% Similarity=0.187 Sum_probs=64.4
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------cccCCC--------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------ANLLTR-------- 382 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~~l~~~-------- 382 (411)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.. ++....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 3455568899999999999986 468899999995432 2335789999999987 100000
Q ss_pred ----------C----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 ----------E----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ----------~----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++.....|+.++++||+|||+.
T Consensus 122 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 163 (371)
T 4exu_A 122 FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163 (371)
T ss_dssp CEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 122489999999999999999999964
No 353
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=98.33 E-value=2.8e-07 Score=83.42 Aligned_cols=87 Identities=16% Similarity=0.216 Sum_probs=65.2
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc---hhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||+|... +++.||||.+..... ...+.|.+|+.++.+
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM 113 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence 45556689999999999999874 678899999854322 224679999999886
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ...++++..+..|+.++++||+|||+.
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 153 (309)
T 2h34_A 114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA 153 (309)
T ss_dssp ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2221111 113589999999999999999999964
No 354
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=98.32 E-value=1.6e-07 Score=83.72 Aligned_cols=83 Identities=16% Similarity=0.247 Sum_probs=62.7
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH----------c---------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------A--------------- 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------~--------------- 377 (411)
++|...+.||+|+||.||+|... +|+.||||++.... ..+.+|++++.+ +
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 34556689999999999999985 68999999995432 467788988876 1
Q ss_pred --------------ccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 --------------NLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 --------------~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....++|..+.+|+.++++||.|||+.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 141 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK 141 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 001101 113588999999999999999999964
No 355
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=98.32 E-value=2e-07 Score=83.42 Aligned_cols=86 Identities=14% Similarity=0.130 Sum_probs=58.6
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHH-HHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMT-VVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~-~~~-----------------------~ 377 (411)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....++..|... +.. +
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 3455568999999999999987 578899999995432 2223344444443 332 2
Q ss_pred ccCCC---------CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTR---------EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~---------~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+..+. .....++|..+.+|+.++++||+|||+
T Consensus 87 ~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 127 (290)
T 3fme_A 87 LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127 (290)
T ss_dssp CCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 22110 013469999999999999999999996
No 356
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=98.32 E-value=3.1e-07 Score=84.44 Aligned_cols=83 Identities=17% Similarity=0.295 Sum_probs=61.1
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN 378 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~ 378 (411)
++|.-.+.||+|+||.||++... +|+.||||.+.... ..+.+|++++.+ +|
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~----~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~ 97 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK----RDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTEL 97 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT----CCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc----CChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeC
Confidence 34555689999999999999874 57899999995432 234567776655 33
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....++.+|++||+|||+.
T Consensus 98 ~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 135 (342)
T 2qr7_A 98 MKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ 135 (342)
T ss_dssp CCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 32211 223589999999999999999999974
No 357
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=98.32 E-value=1.7e-07 Score=86.48 Aligned_cols=80 Identities=16% Similarity=0.155 Sum_probs=58.3
Q ss_pred CCCcCCeeeccCCceEEEEEecC---------CCEEEEEEEecccchhhHhHHHHHHHHHH-------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQD---------GMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~---------~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------- 376 (411)
+|.-.+.||+|+||.||+|.... ++.||||.+... +.|.+|++++.+
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 44455899999999999998753 788999998543 357777776664
Q ss_pred --------------------cccCCCC------C--CCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------------------ANLLTRE------D--KHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------------------~~l~~~~------~--~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. +.. . ...++|..+.+|+.++++||+|||+.
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 178 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN 178 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 100 0 14589999999999999999999964
No 358
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=98.32 E-value=1.4e-07 Score=85.45 Aligned_cols=86 Identities=20% Similarity=0.268 Sum_probs=63.4
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc---hhhHhHHHHHHHHHH------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR---EAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~---~~~~~f~~e~~~~~~------------------------ 376 (411)
.|.-.+.||+|+||.||+|.. .+|+.||||++..... .....|.+|++++.+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 344558999999999999986 5788999999954322 224578899988775
Q ss_pred ---cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ...++++....+|+.++++||+|||+.
T Consensus 93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 135 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN 135 (311)
T ss_dssp EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1111101 123589999999999999999999964
No 359
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=98.32 E-value=3.3e-07 Score=84.83 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=64.8
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|...+.||+|+||.||+|... +|..||+|++.... ....+.|.+|++++.+ +|.
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 113 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 113 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECC
Confidence 3445579999999999999984 68899999996543 3345789999999886 222
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
.+.. ....+++....+|+.++++||+|||+
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~ 149 (360)
T 3eqc_A 114 DGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149 (360)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2211 11248889999999999999999996
No 360
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=98.32 E-value=1.1e-07 Score=90.81 Aligned_cols=86 Identities=12% Similarity=0.169 Sum_probs=56.5
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc---cchhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ---YREAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~---~~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++.+
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 4455668999999999999986 46889999999543 22334668888888775
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+|+.+.. ....+++.....|+.++++||+|||+
T Consensus 228 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 266 (446)
T 4ejn_A 228 EYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266 (446)
T ss_dssp CCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 3332221 12358999999999999999999996
No 361
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=98.31 E-value=1.9e-07 Score=85.58 Aligned_cols=87 Identities=13% Similarity=0.111 Sum_probs=65.3
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc--------hhhHhHHHHHHHHHH------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR--------EAFKSFDNEFMTVVD------------------ 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~--------~~~~~f~~e~~~~~~------------------ 376 (411)
++|...+.||+|+||.||+|+. .+|..||||++..... .....|.+|++++.+
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~ 103 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF 103 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence 4455668999999999999985 5678999999954321 134568889999987
Q ss_pred -----cccCCC-C------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLTR-E------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~~-~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.... . ....+++..+..|+.++++||+|||+.
T Consensus 104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 222111 1 223589999999999999999999964
No 362
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=98.31 E-value=4.5e-07 Score=87.56 Aligned_cols=85 Identities=16% Similarity=0.254 Sum_probs=65.0
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
|...+.||+|+||.||++... +|+.||||++.... ......+.+|+.++.+ ++
T Consensus 28 y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 107 (484)
T 3nyv_A 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEV 107 (484)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEec
Confidence 444588999999999999874 68899999995432 2345779999999987 22
Q ss_pred cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++....+|+.++++||+|||+.
T Consensus 108 ~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 145 (484)
T 3nyv_A 108 YTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145 (484)
T ss_dssp CCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 22111 123589999999999999999999964
No 363
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=98.31 E-value=5.4e-07 Score=84.67 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=56.1
Q ss_pred CeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------cccC
Q 015202 330 NIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------------ANLL 380 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------------~~l~ 380 (411)
++||+|+||.||++.. .+|..||||+++.. ..+.+|++++.+ +|+.
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 6899999999999987 45889999999532 356677776643 2221
Q ss_pred CCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ....++|.....|+.+|++||+|||+.
T Consensus 143 gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 180 (400)
T 1nxk_A 143 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 180 (400)
T ss_dssp SEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111 123589999999999999999999963
No 364
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=98.31 E-value=3.9e-07 Score=86.77 Aligned_cols=87 Identities=8% Similarity=0.114 Sum_probs=64.1
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
++|.-.+.||+|+||.||++.- .+|+.+|+|.+.... ....+.|.+|++++.+ +
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E 90 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFD 90 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEE
Confidence 3455568999999999999976 468899999985433 2345679999999987 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++.....|+.++++||+|||+.
T Consensus 91 ~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~ 129 (444)
T 3soa_A 91 LVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129 (444)
T ss_dssp CCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 222211 123588999999999999999999964
No 365
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=98.31 E-value=1.8e-07 Score=85.42 Aligned_cols=85 Identities=14% Similarity=0.259 Sum_probs=61.2
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCE----EEEEEEeccc-chhhHhHHHHHHHHHH----------------------c
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGME----VAVKVFDLQY-REAFKSFDNEFMTVVD----------------------A 377 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~----vavk~l~~~~-~~~~~~f~~e~~~~~~----------------------~ 377 (411)
|...+.||+|+||.||+|... +|.. ||+|.+.... ....+.|.+|+.++.+ +
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e 94 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQ 94 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEEEE
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEEEE
Confidence 344578999999999999873 4443 7888874332 3345678899998876 2
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++.+.. ....++|..+..|+.++++||+|||+.
T Consensus 95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 95 YLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred eCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 222111 123588999999999999999999964
No 366
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=98.31 E-value=4.9e-07 Score=87.78 Aligned_cols=87 Identities=13% Similarity=0.132 Sum_probs=62.8
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc-------------hhhHhHHHHHHHHHH-------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR-------------EAFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~-------------~~~~~f~~e~~~~~~------------- 376 (411)
+.|...+.||+|+||.||+|... .+..||||++..... ...+.+.+|+.++.+
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 44555689999999999999874 578999999854321 224679999999987
Q ss_pred ----------cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----------ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----------~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....|+.++++||+|||+.
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 165 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH 165 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2222211 123489999999999999999999964
No 367
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=98.30 E-value=5.7e-07 Score=82.48 Aligned_cols=83 Identities=19% Similarity=0.242 Sum_probs=62.8
Q ss_pred HhcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------
Q 015202 322 ATNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 322 at~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------- 376 (411)
..++|.-.+.||+|+||.||+|.. +|+.||||.+... ....+..|++++..
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 345576778999999999999998 6899999999532 34678888888764
Q ss_pred ----cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccC
Q 015202 377 ----ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVES 408 (411)
Q Consensus 377 ----~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh 408 (411)
++..... ....++|.++.+|+.++|+||+|||
T Consensus 116 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH 156 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLH 156 (342)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence 1111101 1124889999999999999999999
No 368
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=98.30 E-value=4.4e-07 Score=83.08 Aligned_cols=84 Identities=15% Similarity=0.146 Sum_probs=60.2
Q ss_pred hcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------- 376 (411)
.++|.-.+.||+|+||.||+|.. .|..||||++.... ...+..|.+++..
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 111 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLY 111 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEE-CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceE
Confidence 34566778999999999999998 48999999985332 3345555555443
Q ss_pred ---cccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....++|..+.+|+.++|+||+|||+.
T Consensus 112 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~ 153 (337)
T 3mdy_A 112 LITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTE 153 (337)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSC
T ss_pred EEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 1111111 123488999999999999999999974
No 369
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=98.30 E-value=4.5e-07 Score=82.56 Aligned_cols=86 Identities=12% Similarity=0.188 Sum_probs=62.0
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--------chhhHhHHHHHHHHHH-------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--------REAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--------~~~~~~f~~e~~~~~~------------------- 376 (411)
+|.-.+.||+|+||.||+|... +|+.||||.+.... ......|.+|++++.+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 90 (322)
T 2ycf_A 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYY 90 (322)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSEE
T ss_pred ceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCceE
Confidence 4555689999999999999874 57889999985322 1123568999999987
Q ss_pred ---cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.....++.++++||.|||+.
T Consensus 91 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 133 (322)
T 2ycf_A 91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133 (322)
T ss_dssp EEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2221111 124589999999999999999999964
No 370
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=98.30 E-value=4.7e-07 Score=81.41 Aligned_cols=86 Identities=16% Similarity=0.211 Sum_probs=63.8
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH----------c---------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------A--------------- 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------~--------------- 377 (411)
++|...+.||+|+||.||+|.. .+|+.||||++... ....+.|.+|++++.+ +
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 3455668999999999999987 47889999999542 3345779999999886 0
Q ss_pred -----------ccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 -----------NLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 -----------~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++....+|+.++++||+|||+.
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~ 135 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC
Confidence 111101 112367788899999999999999964
No 371
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=98.30 E-value=4.7e-07 Score=89.25 Aligned_cols=87 Identities=22% Similarity=0.294 Sum_probs=60.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHH---HHHHH--------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEF---MTVVD-------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~---~~~~~-------------------- 376 (411)
++|.-.++||+|+||.||++.. ..|+.||||++.... ......+.+|. .++..
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 4465668999999999999987 468999999995432 12223344443 44432
Q ss_pred ---cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....++...-..++.+|+.||+|||++
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~ 311 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3333322 123488888889999999999999975
No 372
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=98.30 E-value=8.5e-08 Score=85.36 Aligned_cols=83 Identities=17% Similarity=0.226 Sum_probs=60.6
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH----------ccc-CCC---------CC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------ANL-LTR---------ED 384 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------~~l-~~~---------~~ 384 (411)
+|.-.+.||+|+||.||+|.. .|..||||.+.... ..+.|.+|++++.+ ++. ... ..
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 98 (278)
T 1byg_A 22 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 98 (278)
T ss_dssp GEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred hceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence 344558999999999999998 57899999985432 35679999999987 111 000 00
Q ss_pred C------------CCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 385 K------------HFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 385 ~------------~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+ ..+++..+.+++.++++||+|||+.
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 136 (278)
T 1byg_A 99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136 (278)
T ss_dssp TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0 1267888999999999999999964
No 373
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=98.29 E-value=5.3e-07 Score=82.59 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=37.1
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--------chhhHhHHHHHHHHH
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--------REAFKSFDNEFMTVV 375 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--------~~~~~~f~~e~~~~~ 375 (411)
|...+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++.
T Consensus 22 y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 78 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISK 78 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHH
T ss_pred chheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHH
Confidence 33458999999999999998 78999999995432 112367888887765
No 374
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.29 E-value=3.4e-07 Score=91.87 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=65.6
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH----------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~---------------------- 376 (411)
.++|.-.++||+|+||.||+|... +++.||||++.... ......+..|.+++..
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 355666789999999999999974 57889999996432 2334668888888875
Q ss_pred --cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ....+++.+...|+.+|+.||+|||+.
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 461 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK 461 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3332211 113589999999999999999999964
No 375
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=98.29 E-value=3.4e-07 Score=85.01 Aligned_cols=87 Identities=13% Similarity=0.149 Sum_probs=58.1
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------cccCCC--------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------ANLLTR-------- 382 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~~l~~~-------- 382 (411)
+.|...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++.+ ++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 3455568899999999999987 468999999984322 2335679999999987 111000
Q ss_pred ----------C-----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 383 ----------E-----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 383 ----------~-----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ....+++.....++.++++||+|||+.
T Consensus 105 ~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~ 147 (367)
T 1cm8_A 105 FYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA 147 (367)
T ss_dssp CEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 012478888999999999999999964
No 376
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=98.29 E-value=5e-07 Score=81.84 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=61.0
Q ss_pred hcCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cc
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------AN 378 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~ 378 (411)
.+.|...+.||+|+||.||+|... +|..||||.+.... ..++|.+|++++.+ ++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 105 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEY 105 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeec
Confidence 344666689999999999999884 48899999996432 34679999999987 22
Q ss_pred cCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..+.. ....+++.....|+.++++||.|||+.
T Consensus 106 ~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~ 144 (314)
T 3com_A 106 CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144 (314)
T ss_dssp CTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 21111 123589999999999999999999964
No 377
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=98.29 E-value=1.2e-07 Score=86.44 Aligned_cols=86 Identities=19% Similarity=0.172 Sum_probs=61.5
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccch-hhHhHHHHHHHHHH-----------------------ccc
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYRE-AFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~-~~~~f~~e~~~~~~-----------------------~~l 379 (411)
+|...+.||+|+||.||+|... +|+.||||++...... ....+.+|++++.+ +++
T Consensus 3 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 82 (324)
T 3mtl_A 3 TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL 82 (324)
T ss_dssp SEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECC
T ss_pred ceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccc
Confidence 3445578999999999999974 6889999999543322 23456788888876 222
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. .+..+++.....|+.++++||+|||+.
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 119 (324)
T 3mtl_A 83 DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119 (324)
T ss_dssp SEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1100 134589999999999999999999963
No 378
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=98.28 E-value=3.9e-07 Score=74.14 Aligned_cols=83 Identities=14% Similarity=0.126 Sum_probs=43.9
Q ss_pred CcCCceeecCcccccccchhhhCCCCCCeeecccCc-ccccCchhhhcc----ccCCeeeecCCc-ccccCCccccCCcc
Q 015202 18 TNLIAIYLGGNKLNGSISIALGKLQKLQLLGLEDNQ-LEGSIPYDLCRL----AALFQLDLGDNK-LSGFVPSCFGNLTN 91 (411)
Q Consensus 18 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l----~~L~~L~l~~n~-l~~~~~~~~~~l~~ 91 (411)
.+|+.|++++|.++..--..+.+|++|+.|+|++|. +++.--..+..+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 356666666666654433445666666666666663 443333334432 356666666653 44221123444556
Q ss_pred CCeeecccc
Q 015202 92 LRKLYLGSN 100 (411)
Q Consensus 92 L~~L~l~~n 100 (411)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666555
No 379
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=98.28 E-value=4.2e-07 Score=81.06 Aligned_cols=86 Identities=17% Similarity=0.207 Sum_probs=63.4
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|... ++..||||.+.... ....+.|.+|++++.+ +
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 3445589999999999999874 56789999985432 1224679999999886 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++.....++.++++||.|||+.
T Consensus 95 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 133 (284)
T 2vgo_A 95 FAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133 (284)
T ss_dssp CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred eCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 221111 112478999999999999999999974
No 380
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=98.27 E-value=1e-07 Score=88.90 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=38.3
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc---cchhhHhHHHHHHHHH
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ---YREAFKSFDNEFMTVV 375 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~---~~~~~~~f~~e~~~~~ 375 (411)
+|...+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|++++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~ 128 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLR 128 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGG
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHH
Confidence 344458899999999999996 56899999999532 2334577999995443
No 381
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=98.27 E-value=4.5e-07 Score=82.75 Aligned_cols=86 Identities=21% Similarity=0.368 Sum_probs=60.8
Q ss_pred CCCcCCeeeccCCceEEEEEec-CCCE--EEEEEEecc-cchhhHhHHHHHHHHHH------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ-DGME--VAVKVFDLQ-YREAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~-~~~~--vavk~l~~~-~~~~~~~f~~e~~~~~~------------------------ 376 (411)
+|.-.+.||+|+||.||+|... +|.. ||||++... .....+.|.+|++++.+
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 105 (327)
T 1fvr_A 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 105 (327)
T ss_dssp GCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEE
Confidence 3445589999999999999874 4554 499998643 23345679999999876
Q ss_pred cccCCCC----------------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE----------------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~----------------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++.++.+|+.++++||+|||+.
T Consensus 106 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 161 (327)
T 1fvr_A 106 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 161 (327)
T ss_dssp CCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2221111 113589999999999999999999964
No 382
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=98.27 E-value=3.6e-07 Score=92.07 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=65.2
Q ss_pred cCCCcCCeeeccCCceEEEEEec--CCCEEEEEEEeccc-chhhHhHHHHHHHHHH------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ--DGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~--~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------ 376 (411)
+.|.-.+.||+|+||.||+|... +|+.||||++.... ......|.+|++++.+
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 44555689999999999999974 57899999985433 3345679999999987
Q ss_pred ----cccCCCC----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLTRE----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~~~----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ....++|.++++|+.+|++||.|||+.
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 1111111 122589999999999999999999964
No 383
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=98.27 E-value=7.4e-07 Score=89.16 Aligned_cols=85 Identities=16% Similarity=0.194 Sum_probs=63.1
Q ss_pred CCcCCeeeccCCceEEEEEecC----CCEEEEEEEeccc-chhhHhHHHHHHHHHH----------------------cc
Q 015202 326 FSANNIIGRGGIGSIYKARIQD----GMEVAVKVFDLQY-REAFKSFDNEFMTVVD----------------------AN 378 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~----~~~vavk~l~~~~-~~~~~~f~~e~~~~~~----------------------~~ 378 (411)
|.-.+.||+|+||.||+|.... +..||||++.... ....+.|.+|+.++.+ +|
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~E~ 471 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMEL 471 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEEEc
Confidence 3334789999999999998732 4579999985433 3335789999999987 22
Q ss_pred cCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 LLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
..... ....++|..+..|+.++|+||+|||+.
T Consensus 472 ~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 510 (656)
T 2j0j_A 472 CTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK 510 (656)
T ss_dssp CTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 22111 123589999999999999999999964
No 384
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=98.27 E-value=2.4e-07 Score=84.88 Aligned_cols=85 Identities=15% Similarity=0.163 Sum_probs=63.5
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------c
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY---REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
+|.-.+.||+|+||.||+|.. .+|+.||||.+.... ......+.+|++++.. +
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 344458999999999999997 578899999995432 1224579999999986 2
Q ss_pred ccCCCC-----CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTRE-----DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~~-----~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
|..+.. ....+++.....|+.++++||.|||+
T Consensus 90 ~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~ 126 (336)
T 3h4j_B 90 YAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126 (336)
T ss_dssp CCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 221100 12358999999999999999999996
No 385
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=98.27 E-value=7.9e-07 Score=85.87 Aligned_cols=85 Identities=14% Similarity=0.193 Sum_probs=64.6
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
|.-.+.||+|+||.||++... +|+.||||++.... ......+.+|++++.+ ++.
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 103 (486)
T 3mwu_A 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELY 103 (486)
T ss_dssp EEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred eEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcC
Confidence 445589999999999999874 68899999995432 2345789999999997 222
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.....|+.++++||.|||+.
T Consensus 104 ~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 140 (486)
T 3mwu_A 104 TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140 (486)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2111 123488999999999999999999964
No 386
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.27 E-value=4.4e-07 Score=80.89 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=58.2
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccc------------------hhhHhHHHHHHHHHH-----------
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYR------------------EAFKSFDNEFMTVVD----------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~------------------~~~~~f~~e~~~~~~----------- 376 (411)
+.-.+.||+|+||.||+|...+|+.||||.+..... .....|.+|++++.+
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~~~~ 171 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYA 171 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEE
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCeEEe
Confidence 334489999999999999997789999999854321 124568999999875
Q ss_pred --------cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+..-.. +.......|+.++++||+|||+.
T Consensus 172 ~~~~~lvmE~~~g~~L~~-l~~~~~~~i~~qi~~~l~~lH~~ 212 (282)
T 1zar_A 172 WEGNAVLMELIDAKELYR-VRVENPDEVLDMILEEVAKFYHR 212 (282)
T ss_dssp EETTEEEEECCCCEEGGG-CCCSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEEecCCCcHHH-cchhhHHHHHHHHHHHHHHHHHC
Confidence 2221111000 22234568999999999999964
No 387
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=98.25 E-value=2.8e-07 Score=84.75 Aligned_cols=57 Identities=16% Similarity=0.231 Sum_probs=44.1
Q ss_pred HHHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc-----cchhhHhHHHHHHHHHH
Q 015202 320 FHATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ-----YREAFKSFDNEFMTVVD 376 (411)
Q Consensus 320 ~~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~-----~~~~~~~f~~e~~~~~~ 376 (411)
....++|.-.+.||+|+||.||+|.. .++..||||++... .....+.|.+|++++.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~ 84 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKK 84 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHH
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHh
Confidence 34455676778999999999999987 46788999998543 23345789999999997
No 388
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=98.25 E-value=6.5e-07 Score=83.81 Aligned_cols=88 Identities=16% Similarity=0.163 Sum_probs=57.4
Q ss_pred hcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc--cchhhHhHHHHHHHHHH-----------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ--YREAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~--~~~~~~~f~~e~~~~~~----------------------- 376 (411)
.++|.-.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++.+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~ 87 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY 87 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence 35566668999999999999986 46889999998432 23345678899998886
Q ss_pred ---cccCCCC----CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ---ANLLTRE----DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ---~~l~~~~----~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ....+++..+..|+.++++||+|||+.
T Consensus 88 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~ 128 (388)
T 3oz6_A 88 LVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG 128 (388)
T ss_dssp EEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111000 112488889999999999999999963
No 389
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=98.24 E-value=4.1e-07 Score=83.21 Aligned_cols=88 Identities=14% Similarity=0.194 Sum_probs=63.8
Q ss_pred hcCCCcCCeeeccCCceEEEEEecC------CCEEEEEEEecccc-hhhHhHHHHHHHHHH-------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQD------GMEVAVKVFDLQYR-EAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~------~~~vavk~l~~~~~-~~~~~f~~e~~~~~~------------------- 376 (411)
.++|.-.+.||+|+||.||+|.... +..||||.+..... ...+.|.+|++++.+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4556666899999999999998732 24799999965432 345779999998875
Q ss_pred -----cccCCCC--------------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLTRE--------------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~~~--------------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..+.. ....+++..+.+|+.++|+||+|||+.
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 183 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK 183 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 1111100 022478999999999999999999964
No 390
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=98.23 E-value=7.9e-07 Score=82.60 Aligned_cols=84 Identities=11% Similarity=0.080 Sum_probs=61.8
Q ss_pred CCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH---------------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------- 376 (411)
+|.-.+.||+|+||.||+|.. .+|+.||||.+... ......+.+|++++.+
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred eEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 444558999999999999986 56889999999532 2334667888877664
Q ss_pred -----------ccc--------CCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----------ANL--------LTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----------~~l--------~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. ... ....+++....+|+.+|++||+|||+.
T Consensus 99 ~~~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~~ 150 (373)
T 1q8y_A 99 GPNGVHVVMVFEVLGENLLALIKKY-EHRGIPLIYVKQISKQLLLGLDYMHRR 150 (373)
T ss_dssp ETTEEEEEEEECCCCEEHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceEEEEEecCCCCHHHHHHHh-hccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 111 000 123489999999999999999999974
No 391
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=98.23 E-value=4.6e-07 Score=81.04 Aligned_cols=86 Identities=15% Similarity=0.169 Sum_probs=56.1
Q ss_pred CCCcCCeeeccCCceEEEEEec--CCC--EEEEEEEecc---cchhhHhHHHHHHHHHH---------------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ--DGM--EVAVKVFDLQ---YREAFKSFDNEFMTVVD--------------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~--~~~--~vavk~l~~~---~~~~~~~f~~e~~~~~~--------------------- 376 (411)
+|.-.+.||+|+||.||+|++. ++. .||||.+... .....+.|.+|++++.+
T Consensus 19 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 98 (291)
T 1u46_A 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMV 98 (291)
T ss_dssp GEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred HeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCceee
Confidence 3445588999999999999863 333 6899988543 23345789999999987
Q ss_pred -cccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++..... ....+++....+++.++++||.|||+.
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 140 (291)
T 1u46_A 99 TELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 140 (291)
T ss_dssp EECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 1111111 013488999999999999999999964
No 392
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=98.23 E-value=1e-06 Score=80.66 Aligned_cols=86 Identities=12% Similarity=0.205 Sum_probs=58.3
Q ss_pred cCCCc-CCeeeccCCceEEEEEec-CCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------c
Q 015202 324 NGFSA-NNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------A 377 (411)
Q Consensus 324 ~~f~~-~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~ 377 (411)
++|.- .++||+|+||.||+|... +|+.||||++... ....+++..+...+.. +
T Consensus 28 ~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred ceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 34443 257999999999999884 6899999999543 2223444444444332 2
Q ss_pred ccCCCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
|..+.. ....+++.++.+|+.++++||+|||+.
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~ 147 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 221111 123599999999999999999999964
No 393
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=98.23 E-value=2.7e-07 Score=83.07 Aligned_cols=88 Identities=13% Similarity=0.182 Sum_probs=51.4
Q ss_pred hcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH-----------------------c
Q 015202 323 TNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
.++|.-.+.||+|+||.||+|.. .+|..||||++.... ....++|.+|+.++.+ +
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 45566678999999999999986 467899999985432 2335678899988775 2
Q ss_pred ccCCCC--------------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE--------------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~--------------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. ....+++..+..|+.++++||+|||+.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 140 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 221110 123489999999999999999999963
No 394
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=98.23 E-value=5.3e-07 Score=84.28 Aligned_cols=52 Identities=15% Similarity=0.210 Sum_probs=37.2
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~ 376 (411)
...++|...+.||+|+||.||+|.. .+|+.||||++.... +.+.+|++++..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~ 56 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKV 56 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTT
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHH
Confidence 3455666778999999999999986 578999999985432 223467777765
No 395
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=98.22 E-value=7.8e-07 Score=86.11 Aligned_cols=85 Identities=12% Similarity=0.119 Sum_probs=60.6
Q ss_pred CCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------ccc
Q 015202 326 FSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------ANL 379 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~~l 379 (411)
|...+.||+|+||.||+|... .+..||||++.... ......+.+|++++.. +|.
T Consensus 39 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 118 (494)
T 3lij_A 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECY 118 (494)
T ss_dssp EEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecC
Confidence 445589999999999999874 67899999985432 3335779999999987 222
Q ss_pred CCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 380 LTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 380 ~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
.+.. ....+++.....|+.+|++||+|||+.
T Consensus 119 ~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 155 (494)
T 3lij_A 119 KGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH 155 (494)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2211 113488899999999999999999964
No 396
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=98.22 E-value=6.7e-07 Score=83.18 Aligned_cols=87 Identities=14% Similarity=0.140 Sum_probs=63.8
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc--chhhHhHHHHHHHHHH----------cccCCCC-------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD----------ANLLTRE------- 383 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~----------~~l~~~~------- 383 (411)
++|...+.||+|+||.||+|.- .+|..||||++.... ....+.+.+|+.++.. ++.....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 4455668999999999999986 467889999996432 2335678999999986 1110000
Q ss_pred --------C-------CCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 384 --------D-------KHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 --------~-------~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
. ...+++.....|+.++++||+|||+.
T Consensus 105 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 146 (371)
T 2xrw_A 105 VYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA 146 (371)
T ss_dssp EEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC
Confidence 0 12378889999999999999999964
No 397
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=98.21 E-value=2.2e-06 Score=77.03 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=57.8
Q ss_pred CeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH----------------------------cccC
Q 015202 330 NIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------------ANLL 380 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------------~~l~ 380 (411)
++||+|+||.||++.. .+|+.||||++.. ...+.+|++++.+ +|..
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 6799999999999987 5688999999953 2356778877644 2222
Q ss_pred CCC--------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 381 TRE--------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 381 ~~~--------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+.. ...++++.....|+.++++||+|||+.
T Consensus 99 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 136 (299)
T 3m2w_A 99 GGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI 136 (299)
T ss_dssp SCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 211 123589999999999999999999964
No 398
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=98.21 E-value=3.1e-07 Score=83.16 Aligned_cols=89 Identities=15% Similarity=0.228 Sum_probs=59.8
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc------hhhHhHHHHHHHHHH-----------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR------EAFKSFDNEFMTVVD----------------- 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~------~~~~~f~~e~~~~~~----------------- 376 (411)
...++|.-.+.||+|+||.||+|.. .+|+.||||++..... .....+..|+.++.+
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3445677779999999999999986 5688999999854322 123446677776653
Q ss_pred ----------cc-cCCCC------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 ----------AN-LLTRE------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 ----------~~-l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
++ ..+.. ....++|..+.+|+.++++||+|||+
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~ 157 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 11 11000 12248999999999999999999996
No 399
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=98.20 E-value=2.9e-07 Score=83.82 Aligned_cols=87 Identities=16% Similarity=0.257 Sum_probs=62.7
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccch------hhHhHHHHHHHHHH--------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYRE------AFKSFDNEFMTVVD-------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~------~~~~f~~e~~~~~~-------------------- 376 (411)
++|.-.+.||+|+||.||+|.. .+|+.||||.+...... ....|..|+.++.+
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 4455568999999999999986 56789999999544321 23567788888775
Q ss_pred -----cccCC-CC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -----ANLLT-RE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -----~~l~~-~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++... .. ....+++.....|+.++++||+|||+.
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 168 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC 168 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11111 00 123488999999999999999999964
No 400
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=98.20 E-value=2.4e-07 Score=91.70 Aligned_cols=87 Identities=13% Similarity=0.118 Sum_probs=64.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecc-cchhhHhHHHHHHHHHH-------------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQ-YREAFKSFDNEFMTVVD------------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~-~~~~~~~f~~e~~~~~~------------------------- 376 (411)
++|.-.+.||+|+||.||+|.. .+|..||||++... .......|.+|++++.+
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 5577779999999999999987 46889999998543 33445779999999987
Q ss_pred ----cccCC---------CCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ----ANLLT---------REDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ----~~l~~---------~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+ ......+++..+..|+.++++||+|||+.
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~ 140 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 11111 11112478888999999999999999964
No 401
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=98.20 E-value=1.2e-06 Score=79.91 Aligned_cols=86 Identities=17% Similarity=0.122 Sum_probs=61.2
Q ss_pred cCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEeccc-chhhHhHHHHHHHHHH------------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQY-REAFKSFDNEFMTVVD------------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~-~~~~~~f~~e~~~~~~------------------------~ 377 (411)
++|...+.||+|+||.||+|.. .+|+.||||++.... .....++..|+..+.+ +
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 3444558999999999999998 468899999996543 2334567777764433 1
Q ss_pred ccCCC----------CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTR----------EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~----------~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+..+. .....+++..+.+|+.++++||.|||+
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 143 (327)
T 3aln_A 102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE 143 (327)
T ss_dssp CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc
Confidence 11110 013458999999999999999999996
No 402
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=98.20 E-value=3e-06 Score=78.27 Aligned_cols=91 Identities=13% Similarity=0.081 Sum_probs=56.2
Q ss_pred HHHHHHhcCCCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------
Q 015202 317 LELFHATNGFSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------- 376 (411)
Q Consensus 317 ~~l~~at~~f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------- 376 (411)
.+.....++|.-.+.||+|+||.||+|.. .+|..||||++.... .....+..|++.+..
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44566778888889999999999999997 468899999985432 223456666666654
Q ss_pred -----------cccCCC---------CCCCCCCHHHHHHHHHHHhhhhcccC
Q 015202 377 -----------ANLLTR---------EDKHFMTKEQRVSFVFNLAMECTVES 408 (411)
Q Consensus 377 -----------~~l~~~---------~~~~~l~w~~r~~ia~~ia~gl~ylh 408 (411)
+|..+. .....+++.....|+.++++||.|||
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 146 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH 146 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 111110 01235788889999999999999999
No 403
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=98.15 E-value=7.9e-07 Score=81.80 Aligned_cols=86 Identities=19% Similarity=0.139 Sum_probs=53.1
Q ss_pred CCCcCCeeeccCCceEEEEEec----CCCEEEEEEEecccch-----------hhHhHHHHHHHHHH-------------
Q 015202 325 GFSANNIIGRGGIGSIYKARIQ----DGMEVAVKVFDLQYRE-----------AFKSFDNEFMTVVD------------- 376 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~----~~~~vavk~l~~~~~~-----------~~~~f~~e~~~~~~------------- 376 (411)
+|.-.+.||+|+||.||+|... .+..||||+....... ....+.+|+..+..
T Consensus 38 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~ 117 (345)
T 2v62_A 38 QWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSG 117 (345)
T ss_dssp EEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEE
T ss_pred eEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccc
Confidence 3445589999999999999984 5678999998543321 12235666666654
Q ss_pred --------------ccc----CCCC-CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 --------------ANL----LTRE-DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 --------------~~l----~~~~-~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
++. .+.. ....++|.++.+|+.++|+||+|||+.
T Consensus 118 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 170 (345)
T 2v62_A 118 LTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN 170 (345)
T ss_dssp EEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111 0000 112589999999999999999999964
No 404
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=98.14 E-value=1.3e-06 Score=83.06 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=53.4
Q ss_pred CCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc------
Q 015202 329 NNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN------ 378 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~------ 378 (411)
.++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.+ ++
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~ 96 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ 96 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHH
Confidence 4789999999997665568899999998543 23567889988875 11
Q ss_pred --cCCCCC-CCC---CCHHHHHHHHHHHhhhhcccCCC
Q 015202 379 --LLTRED-KHF---MTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 379 --l~~~~~-~~~---l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..... ... .++....+|+.+||+||+|||+.
T Consensus 97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 134 (434)
T 2rio_A 97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134 (434)
T ss_dssp HHHHTC------------CCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC
Confidence 111110 011 13334578999999999999964
No 405
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=98.14 E-value=6.9e-07 Score=83.05 Aligned_cols=87 Identities=17% Similarity=0.204 Sum_probs=54.6
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEeccc---chhhHhHHHHHHHHHH-----------------------
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD----------------------- 376 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~----------------------- 376 (411)
++|.-.+.||+|+||.||++... ++..||||++.... ......+..|..++.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 34555689999999999999984 57889999995433 2233556777765322
Q ss_pred -cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 -ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 -~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|..+.. ....+++.....++.+|++||+|||+.
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 158 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3332211 113478888889999999999999964
No 406
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=98.13 E-value=4.3e-07 Score=82.45 Aligned_cols=86 Identities=19% Similarity=0.351 Sum_probs=62.2
Q ss_pred hcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEeccc--chhhHhHHHHHHHHHH-----------------------c
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQY--REAFKSFDNEFMTVVD-----------------------A 377 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~--~~~~~~f~~e~~~~~~-----------------------~ 377 (411)
.++|.-.+.||+|+||.||+|...+ .||||.+.... ....+.|.+|+.++.+ +
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3445556899999999999999843 49999885432 2334668888888876 2
Q ss_pred ccCCCC-------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 378 NLLTRE-------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 378 ~l~~~~-------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+..+.. .+..+++..+.+|+.++|+||+|||+.
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 211100 123589999999999999999999964
No 407
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=98.08 E-value=1.1e-06 Score=79.53 Aligned_cols=86 Identities=15% Similarity=0.114 Sum_probs=53.0
Q ss_pred cCCCcCCeeeccCCceEEEEEec-CCCEEEEEEEecccc-hhhHhHHHHHH-HHHH-----------------------c
Q 015202 324 NGFSANNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR-EAFKSFDNEFM-TVVD-----------------------A 377 (411)
Q Consensus 324 ~~f~~~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~-~~~~~f~~e~~-~~~~-----------------------~ 377 (411)
++|...+.||+|+||.||+|... +|+.||||++..... ....++..|.. ++.. +
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e 104 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME 104 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence 34445578999999999999984 688999999965432 22334444444 3333 2
Q ss_pred ccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTRE------DKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+..... ....+++....+|+.++++||+|||+
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 142 (318)
T 2dyl_A 105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142 (318)
T ss_dssp CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 211000 12358899999999999999999996
No 408
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=98.04 E-value=7.7e-07 Score=83.48 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=58.4
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------------
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD----------------------------- 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~----------------------------- 376 (411)
|...++||+|+||.||+|...++..||||++.... ....+|++++..
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~ 117 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVL 117 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEe
Confidence 44558999999999999999777779999984322 223368888876
Q ss_pred cccCCC---------CCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTR---------EDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~---------~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+. .....+++.....++.++++||+|||+.
T Consensus 118 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 160 (394)
T 4e7w_A 118 EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160 (394)
T ss_dssp ECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred eccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 111100 0123588888999999999999999963
No 409
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=98.03 E-value=8e-07 Score=84.36 Aligned_cols=83 Identities=16% Similarity=0.178 Sum_probs=57.2
Q ss_pred hcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------
Q 015202 323 TNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------- 376 (411)
Q Consensus 323 t~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------- 376 (411)
..+|...++||+|+||.||.....+|+.||||++.... ...+.+|++++.+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 34466668999999998554444588999999995432 2346788888875
Q ss_pred ------cccCCCCCCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ------ANLLTREDKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ------~~l~~~~~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+++... .....+.....|+.+|++||+|||+.
T Consensus 100 ~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~ 137 (432)
T 3p23_A 100 CAATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHSL 137 (432)
T ss_dssp CSEEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHHC
Confidence 112111 11244445678999999999999964
No 410
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.90 E-value=3.2e-06 Score=68.73 Aligned_cols=34 Identities=12% Similarity=0.064 Sum_probs=16.3
Q ss_pred CCcEEEcCCCeeeecCCCCccCccCCCeEEccCC
Q 015202 114 YILYLNLSSNSFTIPLPSEIGNLEVLVQIDLSMN 147 (411)
Q Consensus 114 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 147 (411)
.|+.|++++|.++..--..+.++++|+.|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555544332333444455555555554
No 411
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=97.85 E-value=7.3e-06 Score=76.11 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=35.3
Q ss_pred CCcCCeeeccCCceEEEEEe-cCCCEEEEEEEecccc---hhhHhHHHHHH
Q 015202 326 FSANNIIGRGGIGSIYKARI-QDGMEVAVKVFDLQYR---EAFKSFDNEFM 372 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l-~~~~~vavk~l~~~~~---~~~~~f~~e~~ 372 (411)
|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+..|++
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~ 114 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATF 114 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHH
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHH
Confidence 44558999999999999997 4688999999965432 23456777743
No 412
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.82 E-value=5.3e-06 Score=72.87 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=55.1
Q ss_pred CCeeeccCCceEEEEEe-cCCCE--EEEEEEecccch------------------------hhHhHHHHHHHHHH-----
Q 015202 329 NNIIGRGGIGSIYKARI-QDGME--VAVKVFDLQYRE------------------------AFKSFDNEFMTVVD----- 376 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l-~~~~~--vavk~l~~~~~~------------------------~~~~f~~e~~~~~~----- 376 (411)
...||+|+||.||+|.. .+|+. ||||.+...... ....+.+|++.+.+
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 36899999999999998 78888 999987432111 11357889888876
Q ss_pred ----------------cccCCCC-CCCC-------CCHHHHHHHHHHHhhhhcccC-CC
Q 015202 377 ----------------ANLLTRE-DKHF-------MTKEQRVSFVFNLAMECTVES-PN 410 (411)
Q Consensus 377 ----------------~~l~~~~-~~~~-------l~w~~r~~ia~~ia~gl~ylh-~~ 410 (411)
+|+.... .... .++.....++.++++||.||| ++
T Consensus 132 i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 190 (258)
T 1zth_A 132 VSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA 190 (258)
T ss_dssp CCCCCEEEEETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred CCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC
Confidence 3331000 0001 113356889999999999999 53
No 413
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=97.81 E-value=3e-05 Score=75.62 Aligned_cols=82 Identities=11% Similarity=0.053 Sum_probs=47.2
Q ss_pred cCCeeeccCCceEEEEEecCCCEEEEEEEecccc--h------hhHhHHHHHHHHHH-cc--cC--------CCC-----
Q 015202 328 ANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYR--E------AFKSFDNEFMTVVD-AN--LL--------TRE----- 383 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~--~------~~~~f~~e~~~~~~-~~--l~--------~~~----- 383 (411)
..++||+|+||.||+|.. .+..+++|+...... . ..+.|.+|++++.+ .+ +- ...
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 347899999999999976 668899998733211 1 13458999999987 00 00 000
Q ss_pred -CCCCCCHHH----HHHHHHHHhhhhcccCCC
Q 015202 384 -DKHFMTKEQ----RVSFVFNLAMECTVESPN 410 (411)
Q Consensus 384 -~~~~l~w~~----r~~ia~~ia~gl~ylh~~ 410 (411)
.-..-+..+ +.+|+.++++||+|||+.
T Consensus 419 E~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~ 450 (540)
T 3en9_A 419 SYINGKLAKDVIEDNLDIAYKIGEIVGKLHKN 450 (540)
T ss_dssp ECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 000011111 568999999999999964
No 414
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.66 E-value=2.7e-05 Score=64.52 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=61.4
Q ss_pred hhhCCCCCCeeecccC-ccccc----CchhhhccccCCeeeecCCccccc----CCccccCCccCCeeecccccCC----
Q 015202 37 ALGKLQKLQLLGLEDN-QLEGS----IPYDLCRLAALFQLDLGDNKLSGF----VPSCFGNLTNLRKLYLGSNQLT---- 103 (411)
Q Consensus 37 ~~~~l~~L~~L~l~~n-~l~~~----~~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~n~l~---- 103 (411)
.+.+-+.|+.|+|++| .+... +.+.+..-..|+.|+|++|.+... +...+..-+.|+.|+|++|.|+
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445566666776664 55421 233344455677777777766532 2223334456777777777766
Q ss_pred -ccCccccCCCCCcEEEcCCCe---eee----cCCCCccCccCCCeEEccCCee
Q 015202 104 -YIPLTLWNLKYILYLNLSSNS---FTI----PLPSEIGNLEVLVQIDLSMNNF 149 (411)
Q Consensus 104 -~~p~~~~~~~~L~~L~l~~n~---l~~----~~~~~~~~l~~L~~L~l~~n~~ 149 (411)
.+-..+..-+.|++|+|++|. +.. .+...+..-++|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 333445555667777776542 221 1222333445677777776654
No 415
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.48 E-value=2.8e-05 Score=64.37 Aligned_cols=109 Identities=12% Similarity=0.072 Sum_probs=51.4
Q ss_pred cCCcCCceeecCc-cccc----ccchhhhCCCCCCeeecccCcccccC----chhhhccccCCeeeecCCccccc----C
Q 015202 16 NLTNLIAIYLGGN-KLNG----SISIALGKLQKLQLLGLEDNQLEGSI----PYDLCRLAALFQLDLGDNKLSGF----V 82 (411)
Q Consensus 16 ~~~~L~~L~l~~n-~~~~----~~~~~~~~l~~L~~L~l~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~----~ 82 (411)
+-+.|+.|+|++| .+.. .+..++..-+.|+.|+|++|.+.+.- .+.+..-+.|++|+|+.|.|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 3445666666553 4431 12334445555666666666555322 22233345566666666665422 2
Q ss_pred CccccCCccCCeeecccccC---C-----ccCccccCCCCCcEEEcCCCe
Q 015202 83 PSCFGNLTNLRKLYLGSNQL---T-----YIPLTLWNLKYILYLNLSSNS 124 (411)
Q Consensus 83 ~~~~~~l~~L~~L~l~~n~l---~-----~~p~~~~~~~~L~~L~l~~n~ 124 (411)
...+..-+.|+.|+|++|.. . .+...+..-+.|+.|+++.|.
T Consensus 119 a~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 22333344566666654322 2 122233344555566655443
No 416
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=97.35 E-value=0.0001 Score=67.98 Aligned_cols=31 Identities=23% Similarity=0.302 Sum_probs=27.3
Q ss_pred cCCeeeccCCceEEEEEecCCCEEEEEEEec
Q 015202 328 ANNIIGRGGIGSIYKARIQDGMEVAVKVFDL 358 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~ 358 (411)
-...||+|++|.||+|.-++|+.||||.++.
T Consensus 99 I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~ 129 (397)
T 4gyi_A 99 VGSRIGVGKESDIMIVADEKGKQKVLKIHRL 129 (397)
T ss_dssp EEEEEEECSSEEEEEEECTTCCEEEEEEECT
T ss_pred ecCEeeeCCceEEEEEECCCCCEEEEEEEec
Confidence 3478999999999999988999999998743
No 417
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.06 E-value=0.0011 Score=51.01 Aligned_cols=39 Identities=26% Similarity=0.308 Sum_probs=19.6
Q ss_pred CCCEEeCCCCccccccchhhhcCCCCCEEEcccCccccc
Q 015202 186 NLKSLDLSNNNLSGAIPISLEKLLDLQHINVSFNKLEGE 224 (411)
Q Consensus 186 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~l~l~~n~l~~~ 224 (411)
+|+.|+|++|.|+...+..|..+++|+.|+|++|++.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCeecc
Confidence 345555555555544444445555555555555555443
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.00 E-value=0.0007 Score=52.24 Aligned_cols=37 Identities=32% Similarity=0.222 Sum_probs=21.6
Q ss_pred CCCeeecccCcccccCchhhhccccCCeeeecCCccc
Q 015202 43 KLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGDNKLS 79 (411)
Q Consensus 43 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 79 (411)
+|++|+|++|.|+.+.+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4566666666666555555555666666666666543
No 419
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=95.34 E-value=0.0066 Score=59.43 Aligned_cols=76 Identities=14% Similarity=0.060 Sum_probs=44.1
Q ss_pred eeccCCceEEEEE-ecCCCEEEEEEEeccc----------chhhHhHHHHHHHHHH------------------------
Q 015202 332 IGRGGIGSIYKAR-IQDGMEVAVKVFDLQY----------REAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 332 lg~g~~g~vy~g~-l~~~~~vavk~l~~~~----------~~~~~~f~~e~~~~~~------------------------ 376 (411)
.+.|++|.++++. +--|+.+|||.+.... ....++|.+|++++.+
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4455555544432 2246889999984321 1224679999999987
Q ss_pred cccCCCC------CCCCCCHHHHHHHHHHHhhhhcccCCC
Q 015202 377 ANLLTRE------DKHFMTKEQRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 377 ~~l~~~~------~~~~l~w~~r~~ia~~ia~gl~ylh~~ 410 (411)
+|+.+.. ...+++.. +|+.||++||+|+|++
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~ 358 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ 358 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT
T ss_pred ecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC
Confidence 4444322 23346643 5899999999999974
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=93.53 E-value=0.1 Score=46.03 Aligned_cols=49 Identities=18% Similarity=0.114 Sum_probs=39.1
Q ss_pred cCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH
Q 015202 328 ANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD 376 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~ 376 (411)
....++.|.++.||+.+..+|..++||+...........|..|++.+..
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~ 67 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDW 67 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHH
Confidence 3467999999999999998899999999743333334679999998885
No 421
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=91.74 E-value=0.087 Score=45.57 Aligned_cols=84 Identities=8% Similarity=-0.002 Sum_probs=55.2
Q ss_pred HHhcCCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------
Q 015202 321 HATNGFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------ 376 (411)
Q Consensus 321 ~at~~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------ 376 (411)
....++.-....+.|+.+.||+... +|..+++|+...........+.+|++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~-~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVG-ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEEC-SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEEC-CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 3344554445677788889999886 468999999854322334568899988875
Q ss_pred cccCCCCCCCCC-----CHHHHHHHHHHHhhhhcccCC
Q 015202 377 ANLLTREDKHFM-----TKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 ~~l~~~~~~~~l-----~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+++. +..+ +..+..+++.+++++|+.||+
T Consensus 90 e~i~----G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 90 SEAD----GVLCSEEYEDEQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp ECCS----SEEHHHHCCTTTCHHHHHHHHHHHHHHHHH
T ss_pred EecC----CeehhhccCCcccHHHHHHHHHHHHHHHhC
Confidence 2221 1111 112345788999999999996
No 422
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=91.08 E-value=0.18 Score=29.94 Aligned_cols=24 Identities=13% Similarity=0.155 Sum_probs=10.3
Q ss_pred ehhHHHHHHHHHHHHhhhhhhcCC
Q 015202 273 IVLPLSTIFMMVVILLILRYRKRG 296 (411)
Q Consensus 273 i~~~~~~~~~~~~~~~~~~~~~~~ 296 (411)
++.+++++++++..+++++||++.
T Consensus 17 VVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 17 MVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHHHHHhhhhHh
Confidence 333344333444444455544443
No 423
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=88.90 E-value=0.19 Score=43.16 Aligned_cols=71 Identities=10% Similarity=-0.077 Sum_probs=47.8
Q ss_pred eccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-------------------------cccCCCCCCCC
Q 015202 333 GRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-------------------------ANLLTREDKHF 387 (411)
Q Consensus 333 g~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-------------------------~~l~~~~~~~~ 387 (411)
+.|..+.||+....+|..++||..... ....+..|++++.. +++. +.+
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~----G~~ 101 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVP----GQD 101 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCS----SEE
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecC----Ccc
Confidence 345569999998877888999987443 23467788877765 2222 222
Q ss_pred CCHH--HHHHHHHHHhhhhcccCCC
Q 015202 388 MTKE--QRVSFVFNLAMECTVESPN 410 (411)
Q Consensus 388 l~w~--~r~~ia~~ia~gl~ylh~~ 410 (411)
++|. .+..++.++|+.|..||+.
T Consensus 102 l~~~~~~~~~~~~~l~~~l~~lh~~ 126 (264)
T 1nd4_A 102 LLSSHLAPAEKVSIMADAMRRLHTL 126 (264)
T ss_dssp TTTSCCCHHHHHHHHHHHHHHHTTS
T ss_pred cCcCcCCHhHHHHHHHHHHHHHhCC
Confidence 3332 2347889999999999973
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=85.85 E-value=0.93 Score=39.64 Aligned_cols=51 Identities=18% Similarity=0.118 Sum_probs=39.5
Q ss_pred CCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH
Q 015202 326 FSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD 376 (411)
Q Consensus 326 f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~ 376 (411)
+.....+|.|..+.||+.++.||+.+.||+-..........|..|.+.+..
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~ 67 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDW 67 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHH
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHH
Confidence 344567899999999999999999999998644333334578899988774
No 425
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.08 E-value=0.44 Score=28.18 Aligned_cols=19 Identities=16% Similarity=0.235 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHhhhhhhcC
Q 015202 277 LSTIFMMVVILLILRYRKR 295 (411)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~ 295 (411)
++++++++..+++++||++
T Consensus 20 v~~v~ii~~~~~~~~RRRr 38 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKS 38 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhhhhh
Confidence 3333334444444444443
No 426
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=84.15 E-value=1.6 Score=39.46 Aligned_cols=80 Identities=8% Similarity=-0.010 Sum_probs=52.0
Q ss_pred CCeeeccCCceEEEEEecCCCEEEEEEEe--cccc-hhhHhHHHHHHHHHH----------------------------c
Q 015202 329 NNIIGRGGIGSIYKARIQDGMEVAVKVFD--LQYR-EAFKSFDNEFMTVVD----------------------------A 377 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~~~vavk~l~--~~~~-~~~~~f~~e~~~~~~----------------------------~ 377 (411)
...++.|.++.||+....+ ..+++|+.. .... .....+..|++++.. +
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4578899999999988754 677788764 3221 224578888888876 2
Q ss_pred ccCCCCC----CCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 378 NLLTRED----KHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 378 ~l~~~~~----~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
++.+..- -..++..++..++.+++++|+.||+
T Consensus 122 ~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 122 FVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 2222210 0125677899999999999999996
No 427
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=79.04 E-value=4.2 Score=29.07 Aligned_cols=45 Identities=13% Similarity=-0.004 Sum_probs=23.0
Q ss_pred cccccchhhhCCCCCCeeecccCcccccCchhhhccccCCeeeecC
Q 015202 30 LNGSISIALGKLQKLQLLGLEDNQLEGSIPYDLCRLAALFQLDLGD 75 (411)
Q Consensus 30 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 75 (411)
++.+-..+|.+|++|+.+.|..+ ++.+-..+|.+|.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344445556666666655544 2323334555555665555543
No 428
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=78.10 E-value=0.83 Score=26.96 Aligned_cols=26 Identities=23% Similarity=0.388 Sum_probs=10.2
Q ss_pred eEeehhHHHHHHHHHHHHhhhhhhcC
Q 015202 270 LIGIVLPLSTIFMMVVILLILRYRKR 295 (411)
Q Consensus 270 ~~~i~~~~~~~~~~~~~~~~~~~~~~ 295 (411)
+++.++++.+++++...+++|.||++
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~ 39 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQ 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhh
Confidence 34444443333333333344444433
No 429
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=70.36 E-value=1.9 Score=24.65 Aligned_cols=14 Identities=7% Similarity=0.081 Sum_probs=6.8
Q ss_pred ceEeehhHHHHHHH
Q 015202 269 LLIGIVLPLSTIFM 282 (411)
Q Consensus 269 ~~~~i~~~~~~~~~ 282 (411)
.+.+++++.++.+.
T Consensus 12 aIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 12 EIVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHH
Confidence 34555555554433
No 430
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=70.29 E-value=11 Score=26.77 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=22.4
Q ss_pred cccCCCCccCCCccCeeecccccccccCCccccCCCCCCEEeCCC
Q 015202 150 SGAIPTTIGGLKDLQYLFLEYNRLQGSIPDFIGGLINLKSLDLSN 194 (411)
Q Consensus 150 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~l~~ 194 (411)
+.+....|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+.+.+
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 3344455555556665555543 2223444555555555555543
No 431
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=58.04 E-value=5.5 Score=21.68 Aligned_cols=22 Identities=23% Similarity=0.332 Sum_probs=12.6
Q ss_pred ehhHHHHHHHHHHHHhhhhhhc
Q 015202 273 IVLPLSTIFMMVVILLILRYRK 294 (411)
Q Consensus 273 i~~~~~~~~~~~~~~~~~~~~~ 294 (411)
++++.+++++++..-+.|||-+
T Consensus 12 ~i~gl~vif~~lg~tflywrgr 33 (40)
T 2l9u_A 12 VIAGLVVIFMMLGGTFLYWRGR 33 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCceeEEEccc
Confidence 4455566666666555566543
No 432
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=54.72 E-value=28 Score=30.50 Aligned_cols=79 Identities=10% Similarity=0.033 Sum_probs=50.9
Q ss_pred CCCcCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH-----------------------cccCC
Q 015202 325 GFSANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD-----------------------ANLLT 381 (411)
Q Consensus 325 ~f~~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~-----------------------~~l~~ 381 (411)
.......++.|..+.||+. |..+++|.-... .....+..|.+++.. +|+.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~G 111 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKG 111 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCCC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecCC
Confidence 4455678999999999986 566777766322 223458888877664 22222
Q ss_pred CCCC----CCCCHHHHHHHHHHHhhhhcccCC
Q 015202 382 REDK----HFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 382 ~~~~----~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
..-. ..++-.++..++.++|+.|+-||+
T Consensus 112 ~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~ 143 (320)
T 3r70_A 112 ERITYEQYHKLSEKEKDALAYDEATFLKELHS 143 (320)
T ss_dssp BCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 1100 012344578899999999999985
No 433
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=46.51 E-value=6.8 Score=22.57 Aligned_cols=8 Identities=13% Similarity=0.335 Sum_probs=3.3
Q ss_pred HHhhhhhh
Q 015202 286 ILLILRYR 293 (411)
Q Consensus 286 ~~~~~~~~ 293 (411)
++++++||
T Consensus 32 ~~~~~~rR 39 (41)
T 2k9y_A 32 VGFFIHRR 39 (41)
T ss_dssp HHHSSSSS
T ss_pred HheeEeee
Confidence 33444443
No 434
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=45.84 E-value=19 Score=31.22 Aligned_cols=75 Identities=15% Similarity=0.031 Sum_probs=48.1
Q ss_pred CCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH------------------------cc-cCCCC
Q 015202 329 NNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD------------------------AN-LLTRE 383 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~------------------------~~-l~~~~ 383 (411)
...++.|..+.||+.. ..+++|.-... .....+..|++++.. .| +.+.-
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3568999999999742 45777775322 334678899988864 01 00001
Q ss_pred CCCC--------CCHHHHHHHHHHHhhhhcccCC
Q 015202 384 DKHF--------MTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 384 ~~~~--------l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
.+.+ ++-.++.+++.++|+.|+.||+
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHc
Confidence 1222 2334578999999999999995
No 435
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=45.56 E-value=57 Score=28.60 Aligned_cols=45 Identities=16% Similarity=0.081 Sum_probs=33.1
Q ss_pred cCCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH
Q 015202 328 ANNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD 376 (411)
Q Consensus 328 ~~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~ 376 (411)
....++.|....+|+... ++..++||+-... ....|..|.+.+..
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~ 84 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLAL 84 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHH
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHH
Confidence 345688999999999886 5678888887432 24568888877764
No 436
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=43.36 E-value=27 Score=31.70 Aligned_cols=48 Identities=13% Similarity=0.100 Sum_probs=30.3
Q ss_pred CCeeeccCCceEEEEEec-CCCEEEEEEEecccc-------hhhHhHHHHHHHHHH
Q 015202 329 NNIIGRGGIGSIYKARIQ-DGMEVAVKVFDLQYR-------EAFKSFDNEFMTVVD 376 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~-~~~~vavk~l~~~~~-------~~~~~f~~e~~~~~~ 376 (411)
.+.+|.|..+.||++... ++..++||....... .....+..|.+++..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~ 90 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIR 90 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHH
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHH
Confidence 357899999999999764 467899997643211 112346667776654
No 437
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=41.82 E-value=38 Score=30.09 Aligned_cols=80 Identities=6% Similarity=-0.095 Sum_probs=48.5
Q ss_pred Cee-eccCCceEEEEEec-------CCCEEEEEEEeccc---chhhHhHHHHHHHHHH----------------------
Q 015202 330 NII-GRGGIGSIYKARIQ-------DGMEVAVKVFDLQY---REAFKSFDNEFMTVVD---------------------- 376 (411)
Q Consensus 330 ~~l-g~g~~g~vy~g~l~-------~~~~vavk~l~~~~---~~~~~~f~~e~~~~~~---------------------- 376 (411)
..+ +.|..+.+|+.... ++..+++|.-.... ......+..|++++..
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 77888999988764 25677787653322 1112457777776664
Q ss_pred -------cccCCCCCCC------------CCCHHHHHHHHHHHhhhhcccCC
Q 015202 377 -------ANLLTREDKH------------FMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 377 -------~~l~~~~~~~------------~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+++.+..-.. .++-.++..++.++++.|+=||+
T Consensus 106 g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~ 157 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHS 157 (357)
T ss_dssp SSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhC
Confidence 1122111000 13445677889999999999996
No 438
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=38.02 E-value=32 Score=29.99 Aligned_cols=74 Identities=8% Similarity=0.039 Sum_probs=47.3
Q ss_pred CeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH--cc---------------------cCCCCCCC
Q 015202 330 NIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--AN---------------------LLTREDKH 386 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--~~---------------------l~~~~~~~ 386 (411)
..++.|....||+. |..++||.-. .......+..|.+++.. .. +...-.+.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 46788888899986 4566777642 22234678899988875 00 00000121
Q ss_pred C--------CCHHHHHHHHHHHhhhhcccCC
Q 015202 387 F--------MTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 387 ~--------l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
+ ++-.++..++.++++.|+-||+
T Consensus 99 ~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~ 129 (306)
T 3tdw_A 99 ILGEDGMAVLPDDAKDRLALQLAEFMNELSA 129 (306)
T ss_dssp ECHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ECchhhhhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 2 2334678899999999999996
No 439
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=31.84 E-value=6.1 Score=21.96 Aligned_cols=8 Identities=38% Similarity=0.347 Sum_probs=3.4
Q ss_pred Hhhhhhhc
Q 015202 287 LLILRYRK 294 (411)
Q Consensus 287 ~~~~~~~~ 294 (411)
..+|.||+
T Consensus 27 ~~~~iRRr 34 (35)
T 1iij_A 27 VGILIKRR 34 (35)
T ss_dssp TTHHHHHC
T ss_pred hheEEeec
Confidence 33444443
No 440
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=30.32 E-value=43 Score=30.04 Aligned_cols=74 Identities=7% Similarity=0.019 Sum_probs=47.5
Q ss_pred CCeeeccCCceEEEEEecCCCEEEEEEEecccchhhHhHHHHHHHHHH--------------------------cccCCC
Q 015202 329 NNIIGRGGIGSIYKARIQDGMEVAVKVFDLQYREAFKSFDNEFMTVVD--------------------------ANLLTR 382 (411)
Q Consensus 329 ~~~lg~g~~g~vy~g~l~~~~~vavk~l~~~~~~~~~~f~~e~~~~~~--------------------------~~l~~~ 382 (411)
...++.|..+.+|+... +|..+++|.-... ..+..|..++.. +|+.+.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 35678899999999886 6778888876322 258888877775 111111
Q ss_pred CCCCCCCHHHHHHHHHHHhhhhcccCC
Q 015202 383 EDKHFMTKEQRVSFVFNLAMECTVESP 409 (411)
Q Consensus 383 ~~~~~l~w~~r~~ia~~ia~gl~ylh~ 409 (411)
. -..++-.++..++.++++.|+-||+
T Consensus 120 ~-l~~l~~~~~~~~~~~lg~~La~LH~ 145 (362)
T 3ovc_A 120 T-LQDLPETELPAVLQPVAEAMDAIAA 145 (362)
T ss_dssp E-TTTSCGGGSGGGHHHHHHHHHHHHH
T ss_pred C-cccCCHHHHHHHHHHHHHHHHHHhc
Confidence 0 0012233456777888888888875
No 441
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=24.39 E-value=8.4 Score=36.22 Aligned_cols=44 Identities=9% Similarity=0.036 Sum_probs=10.0
Q ss_pred CeeeccCCceEEEEEecC-CCEEEE------EEEeccc--chhhHhHHHHHHHHHH
Q 015202 330 NIIGRGGIGSIYKARIQD-GMEVAV------KVFDLQY--REAFKSFDNEFMTVVD 376 (411)
Q Consensus 330 ~~lg~g~~g~vy~g~l~~-~~~vav------k~l~~~~--~~~~~~f~~e~~~~~~ 376 (411)
+.+| ||.||+|.+.. ...||| |...... .....+|.+|..++..
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~ 200 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKEN 200 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------
T ss_pred ccCC---chhhhcccccccCCchhhhhccCcccccccccccccccccccccccccc
Confidence 4455 99999999954 367888 7764322 2334678888887763
Done!