Query 015208
Match_columns 411
No_of_seqs 338 out of 2017
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 08:35:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015208.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015208hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 3.4E-18 1.1E-22 155.8 13.0 156 19-182 4-165 (195)
2 2nyi_A Unknown protein; protei 99.7 3.7E-17 1.3E-21 148.9 14.2 166 108-325 4-173 (195)
3 1u8s_A Glycine cleavage system 99.7 1E-16 3.5E-21 145.5 15.7 158 20-182 6-168 (192)
4 1u8s_A Glycine cleavage system 99.6 2.9E-15 1E-19 135.8 15.6 158 108-317 5-167 (192)
5 3p96_A Phosphoserine phosphata 99.0 7.1E-09 2.4E-13 104.4 17.6 137 242-389 10-151 (415)
6 3p96_A Phosphoserine phosphata 99.0 1.3E-08 4.3E-13 102.6 18.2 154 19-181 11-167 (415)
7 2f06_A Conserved hypothetical 98.4 1.1E-05 3.7E-10 68.9 16.2 112 20-156 6-118 (144)
8 1zpv_A ACT domain protein; str 98.3 7.5E-06 2.6E-10 64.1 10.5 66 20-85 5-70 (91)
9 1zpv_A ACT domain protein; str 98.2 5.7E-06 1.9E-10 64.8 9.2 66 243-315 4-69 (91)
10 3l76_A Aspartokinase; alloster 98.2 0.00071 2.4E-08 71.1 26.2 279 19-370 269-564 (600)
11 2f06_A Conserved hypothetical 98.0 9.5E-05 3.2E-09 63.0 13.9 100 245-370 7-106 (144)
12 3n0v_A Formyltetrahydrofolate 97.8 0.00029 1E-08 67.2 14.6 66 19-85 7-75 (286)
13 2ko1_A CTR148A, GTP pyrophosph 97.8 8.9E-05 3E-09 57.2 9.0 63 243-312 4-66 (88)
14 2ko1_A CTR148A, GTP pyrophosph 97.8 0.0001 3.5E-09 56.9 9.3 50 108-158 4-53 (88)
15 3o1l_A Formyltetrahydrofolate 97.8 9.6E-05 3.3E-09 71.0 10.1 68 17-84 19-89 (302)
16 3obi_A Formyltetrahydrofolate 97.7 0.0005 1.7E-08 65.6 14.1 117 20-146 6-126 (288)
17 2re1_A Aspartokinase, alpha an 97.7 0.00097 3.3E-08 58.3 15.0 108 18-139 23-136 (167)
18 3obi_A Formyltetrahydrofolate 97.7 0.0017 5.9E-08 61.9 16.9 118 243-371 5-126 (288)
19 3n0v_A Formyltetrahydrofolate 97.7 0.00052 1.8E-08 65.4 13.2 71 243-319 7-77 (286)
20 2re1_A Aspartokinase, alpha an 97.6 0.00027 9.3E-09 61.9 10.4 111 242-370 23-140 (167)
21 3nrb_A Formyltetrahydrofolate 97.6 0.00063 2.1E-08 64.9 13.3 117 19-146 6-125 (287)
22 3lou_A Formyltetrahydrofolate 97.6 0.00024 8.1E-09 68.0 10.2 65 19-84 9-79 (292)
23 2dt9_A Aspartokinase; protein- 97.6 0.00057 2E-08 59.8 11.4 112 242-370 14-132 (167)
24 3nrb_A Formyltetrahydrofolate 97.5 0.0027 9.4E-08 60.4 15.8 114 243-371 6-125 (287)
25 2dtj_A Aspartokinase; protein- 97.4 0.00066 2.3E-08 60.1 9.5 110 242-370 13-132 (178)
26 3o1l_A Formyltetrahydrofolate 97.4 0.0037 1.3E-07 59.9 15.0 67 243-313 21-87 (302)
27 3lou_A Formyltetrahydrofolate 97.3 0.0058 2E-07 58.3 15.7 44 243-286 9-52 (292)
28 3l76_A Aspartokinase; alloster 97.2 0.14 4.9E-06 53.6 26.0 192 18-274 353-560 (600)
29 2f1f_A Acetolactate synthase i 97.2 0.0017 5.7E-08 56.8 9.2 66 109-180 3-69 (164)
30 2dtj_A Aspartokinase; protein- 97.2 0.0093 3.2E-07 52.6 14.3 137 18-181 13-157 (178)
31 2dt9_A Aspartokinase; protein- 97.1 0.023 7.8E-07 49.4 16.0 108 107-273 14-127 (167)
32 3s1t_A Aspartokinase; ACT doma 97.0 0.053 1.8E-06 47.9 17.4 111 108-276 15-131 (181)
33 2pc6_A Probable acetolactate s 96.9 0.0032 1.1E-07 54.9 8.7 65 110-180 5-70 (165)
34 2f1f_A Acetolactate synthase i 96.8 0.0011 3.7E-08 57.9 4.7 34 337-370 4-37 (164)
35 2pc6_A Probable acetolactate s 96.5 0.0048 1.6E-07 53.8 6.7 34 337-370 5-38 (165)
36 3s1t_A Aspartokinase; ACT doma 96.4 0.035 1.2E-06 49.0 11.9 113 243-370 15-133 (181)
37 2fgc_A Acetolactate synthase, 96.3 0.015 5.2E-07 51.7 9.0 66 109-180 29-95 (193)
38 4go7_X Aspartokinase; transfer 96.3 0.014 4.7E-07 52.6 8.6 113 242-370 33-152 (200)
39 1y7p_A Hypothetical protein AF 96.2 0.0074 2.5E-07 54.6 6.6 38 336-373 4-41 (223)
40 1y7p_A Hypothetical protein AF 96.1 0.014 4.9E-07 52.7 7.9 49 109-157 4-56 (223)
41 3ab4_A Aspartokinase; aspartat 95.9 0.51 1.7E-05 47.1 19.2 108 108-273 263-376 (421)
42 2jhe_A Transcription regulator 95.8 0.031 1.1E-06 48.3 8.7 57 246-312 2-58 (190)
43 2fgc_A Acetolactate synthase, 95.8 0.048 1.6E-06 48.5 9.7 112 20-140 29-143 (193)
44 2jhe_A Transcription regulator 95.7 0.045 1.5E-06 47.2 9.2 59 111-178 2-60 (190)
45 4go7_X Aspartokinase; transfer 95.5 0.021 7.2E-07 51.4 6.2 110 18-140 33-149 (200)
46 3ab4_A Aspartokinase; aspartat 95.4 0.15 5.2E-06 50.9 13.0 111 242-370 262-381 (421)
47 3c1m_A Probable aspartokinase; 95.0 0.11 3.7E-06 52.9 10.7 107 242-368 316-439 (473)
48 2qmx_A Prephenate dehydratase; 94.3 0.092 3.1E-06 49.7 7.6 63 339-405 203-267 (283)
49 3tvi_A Aspartokinase; structur 94.0 0.16 5.5E-06 51.2 9.0 108 242-368 296-409 (446)
50 3luy_A Probable chorismate mut 93.9 0.13 4.3E-06 49.8 7.6 49 345-397 217-265 (329)
51 1sc6_A PGDH, D-3-phosphoglycer 93.8 0.068 2.3E-06 53.2 5.8 61 337-405 332-393 (404)
52 3mwb_A Prephenate dehydratase; 93.7 0.15 5E-06 49.0 7.6 64 338-405 203-269 (313)
53 2qmw_A PDT, prephenate dehydra 93.5 0.23 7.9E-06 46.5 8.6 49 338-389 188-239 (267)
54 1ygy_A PGDH, D-3-phosphoglycer 93.5 0.19 6.5E-06 51.8 8.8 62 337-405 455-516 (529)
55 1sc6_A PGDH, D-3-phosphoglycer 92.5 0.3 1E-05 48.6 8.2 50 108-158 330-379 (404)
56 3mah_A Aspartokinase; aspartat 91.5 0.32 1.1E-05 41.5 6.2 99 243-368 17-121 (157)
57 2cdq_A Aspartokinase; aspartat 91.3 0.42 1.4E-05 48.9 7.8 110 242-369 339-455 (510)
58 3c1m_A Probable aspartokinase; 90.8 6.1 0.00021 39.8 15.9 114 108-273 317-436 (473)
59 1ygy_A PGDH, D-3-phosphoglycer 90.7 1.1 3.8E-05 46.0 10.4 64 106-173 451-515 (529)
60 3tvi_A Aspartokinase; structur 90.4 1.4 4.8E-05 44.3 10.6 108 20-144 298-412 (446)
61 2qmx_A Prephenate dehydratase; 90.1 1.4 5E-05 41.4 9.8 53 244-298 200-253 (283)
62 3luy_A Probable chorismate mut 89.7 2.8 9.7E-05 40.3 11.6 44 253-298 217-261 (329)
63 3k5p_A D-3-phosphoglycerate de 89.5 2.1 7.1E-05 42.6 10.9 51 105-156 339-389 (416)
64 3k5p_A D-3-phosphoglycerate de 87.6 1.4 4.9E-05 43.8 8.2 65 18-83 341-405 (416)
65 2qmw_A PDT, prephenate dehydra 84.4 2.8 9.5E-05 39.1 7.9 52 242-295 184-239 (267)
66 3mwb_A Prephenate dehydratase; 83.6 2.7 9.1E-05 40.2 7.6 55 107-162 199-254 (313)
67 3mah_A Aspartokinase; aspartat 83.3 2.8 9.7E-05 35.4 7.0 102 19-144 17-124 (157)
68 2cdq_A Aspartokinase; aspartat 83.0 19 0.00066 36.5 14.3 107 108-273 340-451 (510)
69 3mtj_A Homoserine dehydrogenas 80.8 1.2 4.2E-05 44.6 4.3 37 334-370 357-393 (444)
70 1phz_A Protein (phenylalanine 79.4 1 3.5E-05 44.7 3.1 64 338-406 36-101 (429)
71 3mtj_A Homoserine dehydrogenas 65.8 6 0.0002 39.6 5.0 36 107-142 357-392 (444)
72 2j0w_A Lysine-sensitive aspart 60.1 4.6 0.00016 40.5 2.9 107 242-368 306-419 (449)
73 1phz_A Protein (phenylalanine 59.7 17 0.0006 35.9 6.9 54 106-159 31-84 (429)
74 1rwu_A Hypothetical UPF0250 pr 45.0 47 0.0016 26.3 6.0 57 19-79 35-94 (109)
75 1rwu_A Hypothetical UPF0250 pr 41.6 1.3E+02 0.0044 23.7 8.5 62 243-312 35-99 (109)
76 1zhv_A Hypothetical protein AT 41.5 45 0.0015 27.4 5.6 34 243-278 61-97 (134)
77 3rri_A Glyoxalase/bleomycin re 37.3 44 0.0015 26.0 4.9 46 348-395 79-124 (135)
78 2qsw_A Methionine import ATP-b 36.2 1.2E+02 0.0043 22.9 7.3 40 255-297 37-76 (100)
79 1zhv_A Hypothetical protein AT 35.2 24 0.00083 29.1 3.0 26 345-370 74-99 (134)
80 3ced_A Methionine import ATP-b 35.1 1.5E+02 0.005 22.6 8.1 39 255-296 34-72 (98)
81 3dhx_A Methionine import ATP-b 31.2 1.8E+02 0.0061 22.4 8.5 52 253-312 34-85 (106)
82 2qrr_A Methionine import ATP-b 30.5 1.3E+02 0.0043 22.9 6.4 40 255-297 37-76 (101)
83 3r6a_A Uncharacterized protein 29.6 60 0.0021 26.1 4.6 39 350-395 76-114 (144)
84 1zvp_A Hypothetical protein VC 29.1 35 0.0012 28.1 2.9 28 343-370 81-108 (133)
85 3g12_A Putative lactoylglutath 27.9 2.1E+02 0.0071 22.0 7.8 49 107-163 65-114 (128)
86 3kol_A Oxidoreductase, glyoxal 25.4 79 0.0027 24.9 4.6 39 350-395 109-147 (156)
87 4g6x_A Glyoxalase/bleomycin re 24.1 1E+02 0.0036 24.7 5.2 39 350-395 109-147 (155)
88 1tdj_A Biosynthetic threonine 24.0 2E+02 0.0068 29.1 8.1 132 21-156 339-481 (514)
89 3r4q_A Lactoylglutathione lyas 23.2 62 0.0021 26.4 3.5 39 350-395 90-128 (160)
90 3zw5_A Glyoxalase domain-conta 21.8 72 0.0025 25.4 3.6 44 349-395 100-143 (147)
91 2rbb_A Glyoxalase/bleomycin re 21.2 1.2E+02 0.004 23.7 4.8 51 338-395 78-128 (141)
92 1zvp_A Hypothetical protein VC 21.1 2E+02 0.0068 23.4 6.1 45 106-156 68-115 (133)
93 3e5d_A Putative glyoxalase I; 20.5 1E+02 0.0035 23.1 4.2 39 350-394 85-123 (127)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.76 E-value=3.4e-18 Score=155.82 Aligned_cols=156 Identities=18% Similarity=0.177 Sum_probs=108.6
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE-cCcEEEEEEEEEcCCCc---cHHHHHHHHHhhCCCCCCccee
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST-DGKWCYIVFWVIGDSQT---RWGLLKKRLMGACPSCSSASVV 94 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t-dg~~~~d~f~V~~~~g~---~~~~l~~~L~~~l~~~~~~~~~ 94 (411)
..++|+|+|+||||||++|+++|+++||||++|++++ .|..+| .|.|..+... +++.|++.|...+....-....
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 82 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAKDGKLIQSALESALPGFQISTRRASSV 82 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSSSSHHHHHHHHHHSTTCEEEEEECCCC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCccchhHHHHHHHHHHHHHHhcCCeEEE
Confidence 4578999999999999999999999999999999987 565354 8888755321 1445554444332110000000
Q ss_pred eeecccccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCC--CeEEEEEEEEcCCCcCCCHhHHHHH
Q 015208 95 LYYRAEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD--GKVMDLFFVTDTRELLHTRKRKEDT 172 (411)
Q Consensus 95 ~~~~~~~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~--~~~~d~F~V~~~~~~~~~~~~~~~l 172 (411)
.. .+ . ......++|+|.|+||||++++|+++|+++|+||.+++++| .+ .+..+.|++....+.+ ++.. +.|
T Consensus 83 ~~-~~--~-~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t-~~~~~~~~~~F~m~~~~~~~-~~~~-~~l 155 (195)
T 2nyi_A 83 AE-RH--V-SPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETET-LPAPFAGFTLFRMGSRVAFP-FPLY-QEV 155 (195)
T ss_dssp -------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-EECSSTTCEEEEEEEEEEEE-GGGH-HHH
T ss_pred Ee-CC--c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeee-cccccCCCCeEEEEEEEEcC-CCcc-HHH
Confidence 00 11 1 34456799999999999999999999999999999999998 43 2335778776654322 2334 778
Q ss_pred HHHHHHHHcc
Q 015208 173 YEHLKTILGN 182 (411)
Q Consensus 173 ~~~L~~~L~~ 182 (411)
++.|......
T Consensus 156 ~~~l~~~a~~ 165 (195)
T 2nyi_A 156 VTALSRVEEE 165 (195)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888875543
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.73 E-value=3.7e-17 Score=148.89 Aligned_cols=166 Identities=12% Similarity=0.086 Sum_probs=113.8
Q ss_pred ceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHccccccc
Q 015208 108 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISC 187 (411)
Q Consensus 108 ~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~~~~ 187 (411)
..++|+|+|+|||||+++|+++|+++|+||.+|++++..++.++ .|.|..+.. ..+.+++.|++.|..++.+..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~--- 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTR--- 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEE---
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcC---
Confidence 46899999999999999999999999999999999985544444 888865422 122345666555544332210
Q ss_pred ccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeCCchhHHHHHHHHHHh
Q 015208 188 DVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKD 267 (411)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~DRpGLL~~i~~~l~~ 267 (411)
+ .-++. . .+ . ......++|+|.|+|||||+++|+++|++
T Consensus 78 --------~----------~~~~~----------------~--~~----~-~~~~~~~iltv~g~DrpGiva~Vt~~La~ 116 (195)
T 2nyi_A 78 --------R----------ASSVA----------------E--RH----V-SPDTREYELYVEGPDSEGIVEAVTAVLAK 116 (195)
T ss_dssp --------E----------CCCC--------------------------C-CTTEEEEEEEEEEECCTTHHHHHHHHHHH
T ss_pred --------C----------eEEEE----------------e--CC----c-CCCCcEEEEEEEeCCCcCHHHHHHHHHHH
Confidence 1 00000 0 01 1 34456799999999999999999999999
Q ss_pred CCeEEEEEEEEeeecC--ceEEEEEEEe-cCCCcCCCHHHHHHHHHHHHHHHcC-CceEEEe
Q 015208 268 YNIQVSYGRFSRRQRG--NCEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELLQ-PLRVTVV 325 (411)
Q Consensus 268 ~g~~i~~a~i~~~t~g--~~~~d~F~v~-~~g~~~~~~~~~~~l~~~L~~~l~~-~~~~~i~ 325 (411)
+|+||.+++.. +.+ ++..+.|++. ..+.+ ++.. +.|++.|...... .+.+.+.
T Consensus 117 ~g~nI~~~~~~--t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a~~l~~di~~~ 173 (195)
T 2nyi_A 117 KGANIVELETE--TLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVEEEFGVDIDLE 173 (195)
T ss_dssp TTCEEEEEEEE--EEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCCEEEceee--ecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHHHHcCeEEEEE
Confidence 99999999988 555 5567899885 22222 2335 7888888654433 3444444
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.72 E-value=1e-16 Score=145.48 Aligned_cols=158 Identities=11% Similarity=0.151 Sum_probs=112.0
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE-cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcceeeeec
Q 015208 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST-DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVLYYR 98 (411)
Q Consensus 20 ~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t-dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~~~~~ 98 (411)
...|+|+|+||||+|++++++|+++|+||+++++++ .|. |...|.|..+. ..++.+++.|.+.... ..... .+.+
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~-f~~~~~v~~~~-~~~~~l~~~L~~~~~~-~~~~~-~~~~ 81 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKE-FTLLMLISGSP-SNITRVETTLPLLGQQ-HDLIT-MMKR 81 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTE-EEEEEEEEECH-HHHHHHHHHHHHHHHH-HTCEE-EEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCc-eEEEEEEecCC-CCHHHHHHHHHHHHHh-cCCEE-EEEe
Confidence 578999999999999999999999999999999987 555 55688887653 4567777777765421 11100 1111
Q ss_pred cc-ccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCC---CeEEEEEEEEcCCCcCCCHhHHHHHHH
Q 015208 99 AE-MQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD---GKVMDLFFVTDTRELLHTRKRKEDTYE 174 (411)
Q Consensus 99 ~~-~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~---~~~~d~F~V~~~~~~~~~~~~~~~l~~ 174 (411)
.. ..+......++|+|.++||||++++|+++|+++|+||.+++.+|... .+..+.|+++...+.+ ++...+.|++
T Consensus 82 ~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~l~~ 160 (192)
T 1u8s_A 82 TSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQLQE 160 (192)
T ss_dssp ECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHHHHH
T ss_pred CCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHHHHH
Confidence 11 11344557789999999999999999999999999999999998321 2456788886654321 2334677888
Q ss_pred HHHHHHcc
Q 015208 175 HLKTILGN 182 (411)
Q Consensus 175 ~L~~~L~~ 182 (411)
.|......
T Consensus 161 ~l~~~~~~ 168 (192)
T 1u8s_A 161 EFDALCTA 168 (192)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88875543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.64 E-value=2.9e-15 Score=135.82 Aligned_cols=158 Identities=10% Similarity=0.051 Sum_probs=111.7
Q ss_pred ceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHccccccc
Q 015208 108 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAMISC 187 (411)
Q Consensus 108 ~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~~~~ 187 (411)
..++|+|+++||||++++|+++|+++|+||.++++++ ..|.+.-.|.|..+ +..++.|++.|.++.....
T Consensus 5 ~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~~~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~~--- 74 (192)
T 1u8s_A 5 QHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FGKEFTLLMLISGS------PSNITRVETTLPLLGQQHD--- 74 (192)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETTEEEEEEEEEEC------HHHHHHHHHHHHHHHHHHT---
T ss_pred cEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cCCceEEEEEEecC------CCCHHHHHHHHHHHHHhcC---
Confidence 4689999999999999999999999999999999998 45666668888543 2467888888887663211
Q ss_pred ccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeCCchhHHHHHHHHHHh
Q 015208 188 DVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQDHKGLLYDIMRTLKD 267 (411)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~DRpGLL~~i~~~l~~ 267 (411)
+ .. ++... + .++ +..+...++|+|.|+||||++++|+++|++
T Consensus 75 ---~---~~------------~~~~~---~------------~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~ 116 (192)
T 1u8s_A 75 ---L---IT------------MMKRT---S------------PHD-----HQTHAYTVEVYVESDDKLGLTEKFTQFFAQ 116 (192)
T ss_dssp ---C---EE------------EEEEE---C------------CCC-----CCCCSEEEEEEEEESCCTTHHHHHHHHHHH
T ss_pred ---C---EE------------EEEeC---C------------CCC-----CccCCceEEEEEEeCCCccHHHHHHHHHHH
Confidence 0 01 00000 0 011 244557789999999999999999999999
Q ss_pred CCeEEEEEEEEeeecCc----eEEEEEEEe-cCCCcCCCHHHHHHHHHHHHHHHc
Q 015208 268 YNIQVSYGRFSRRQRGN----CEIDLFIMQ-ADGKKIVDPSKQNGLSSRLWMELL 317 (411)
Q Consensus 268 ~g~~i~~a~i~~~t~g~----~~~d~F~v~-~~g~~~~~~~~~~~l~~~L~~~l~ 317 (411)
+|+||.+++.. |.+. +..+.|++. ..+. +++...+.|++.|.+...
T Consensus 117 ~~~nI~~~~~~--t~~~~~~~~~~~~F~~~~~~~~--~~~~~~~~l~~~l~~~~~ 167 (192)
T 1u8s_A 117 RQIGMASLSAQ--TISKDKLHSEQNQFHIAISARV--DSGCNLMQLQEEFDALCT 167 (192)
T ss_dssp TTCCEEEEEEE--EEC--------CEEEEEEEEEE--CTTSCHHHHHHHHHHHHH
T ss_pred cCCcHHHhhhh--cccCCccCCCCCEEEEEEEEeC--CCCCCHHHHHHHHHHHHH
Confidence 99999998887 5663 577889885 2221 122346788888765443
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=99.02 E-value=7.1e-09 Score=104.39 Aligned_cols=137 Identities=8% Similarity=-0.018 Sum_probs=95.7
Q ss_pred CCceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcC--C
Q 015208 242 PGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ--P 319 (411)
Q Consensus 242 ~~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~--~ 319 (411)
...++|++.|+|||||++.|+.+|+++|+||.++.-. ..++.+.-...+...+.. ...+.|++.|.. +.. .
T Consensus 10 ~~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~--~~~~~f~~~~~~~~~~~~----~~~~~l~~~l~~-~~~~~~ 82 (415)
T 3p96_A 10 KVSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQV--VIRHRLTLGVLVCCPADV----ADGPALRHDVEA-AIRKVG 82 (415)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEE--EETTEEEEEEEEEECHHH----HTSHHHHHHHHH-HHHHTT
T ss_pred CCeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeE--EECCEeEEEEEEEecCCc----CCHHHHHHHHHH-HHHHcC
Confidence 3468999999999999999999999999999999877 456665533333321110 023678777744 333 3
Q ss_pred ceEEEeccCCC--ccccccceEEEEeCC-CCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcC
Q 015208 320 LRVTVVSRGPD--TELLVANPVELSGKG-RPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEG 389 (411)
Q Consensus 320 ~~~~i~~~~~~--~~~~~~~~~~v~~~D-RpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~ 389 (411)
+.+.+...... ......+.+.+.|.+ +||++.+|+.+|+++|+||.++..- +..... ...|++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~--~~~~~~--~~~~~v~~~ 151 (415)
T 3p96_A 83 LDVSIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGV--SDYPVI--GLELRVSVP 151 (415)
T ss_dssp CEEEEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEE--ESSSSE--EEEEEEECC
T ss_pred eEEEEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeec--cCCCce--EEEEEeeCC
Confidence 44444432221 122346689999999 9999999999999999999999877 533333 344777544
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.99 E-value=1.3e-08 Score=102.57 Aligned_cols=154 Identities=12% Similarity=0.063 Sum_probs=102.5
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCc-cHHHHHHHHHhhCCCCCCcceeeee
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQT-RWGLLKKRLMGACPSCSSASVVLYY 97 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~-~~~~l~~~L~~~l~~~~~~~~~~~~ 97 (411)
....|+|.|+|||||.+.|+++|+++|+||++++.+..+.+|.-...+..+... ..+.+++.|+..... .... ..+.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~-~~~~ 88 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRK-VGLD-VSIE 88 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHHHTSHHHHHHHHHHHHH-TTCE-EEEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCcCCHHHHHHHHHHHHHH-cCeE-EEEE
Confidence 357899999999999999999999999999999998844447666666544322 335666666553211 1111 1111
Q ss_pred ccc-ccCCCCCceEEEEEEecC-cccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHH
Q 015208 98 RAE-MQAPKPSDVFLLKLSCYD-RKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEH 175 (411)
Q Consensus 98 ~~~-~~~~~~~~~t~i~v~~~D-r~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~ 175 (411)
... ........+..+++.+.| ++|++.+|+.+|+.+|+||.+.+..+ ....+.--|+|.-+. ...+.++..
T Consensus 89 ~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~-~~~~~~~~~~v~~~~------~~~~~l~~~ 161 (415)
T 3p96_A 89 RSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVS-DYPVIGLELRVSVPP------GADEALRTA 161 (415)
T ss_dssp ECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEE-SSSSEEEEEEEECCT------TCHHHHHHH
T ss_pred ECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeecc-CCCceEEEEEeeCCC------CCHHHHHHH
Confidence 111 111244578899999999 99999999999999999998888777 222232236663332 123456666
Q ss_pred HHHHHc
Q 015208 176 LKTILG 181 (411)
Q Consensus 176 L~~~L~ 181 (411)
|.+...
T Consensus 162 l~~l~~ 167 (415)
T 3p96_A 162 LNRVSS 167 (415)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 665443
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.41 E-value=1.1e-05 Score=68.94 Aligned_cols=112 Identities=12% Similarity=0.016 Sum_probs=78.6
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE-cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcceeeeec
Q 015208 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST-DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVLYYR 98 (411)
Q Consensus 20 ~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t-dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~~~~~ 98 (411)
..+++|..+|+||.++++++.|+++|+||..-.+.. ... -.-.|.+. +.+...+.|++. +.. .
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~-~~~~~~~~-----d~~~a~~~L~~~--G~~-v------- 69 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADF-GILRGIVS-----DPDKAYKALKDN--HFA-V------- 69 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSC-EEEEEEES-----CHHHHHHHHHHT--TCC-E-------
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCC-CEEEEEeC-----CHHHHHHHHHHc--CCe-E-------
Confidence 357899999999999999999999999999876653 221 11234432 445555656652 111 0
Q ss_pred ccccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEE
Q 015208 99 AEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFV 156 (411)
Q Consensus 99 ~~~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V 156 (411)
....++-+..+|+||.+++++++|+++|+||.....+. .+++..-+|.+
T Consensus 70 --------~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~ 118 (144)
T 2f06_A 70 --------NITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRP 118 (144)
T ss_dssp --------EEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEE
T ss_pred --------eeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEe
Confidence 01245777789999999999999999999998777663 34666555554
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.25 E-value=7.5e-06 Score=64.09 Aligned_cols=66 Identities=20% Similarity=0.228 Sum_probs=52.7
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCccHHHHHHHHHhhC
Q 015208 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQTRWGLLKKRLMGAC 85 (411)
Q Consensus 20 ~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~~~~~l~~~L~~~l 85 (411)
...++|.++||||++++++++|+++|+||.+....+++..+.-.+.+.-+.....+.+.+.|++..
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 468999999999999999999999999999999987434476777776554446677777777643
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.23 E-value=5.7e-06 Score=64.79 Aligned_cols=66 Identities=8% Similarity=0.122 Sum_probs=48.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHH
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWME 315 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~ 315 (411)
..+.|++.|+||||+|++|+.+|+++|+||.+....+ ..+.+.-.+.+... +...++.|.+.|.+.
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~--~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~~ 69 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTV--LDEYFTMMAVVSSD-----EKQDFTYLRNEFEAF 69 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEE--ETTEEEEEEEEEES-----SCCCHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEE--EcCEEEEEEEEEeC-----CCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999888773 34444433444322 223567788887543
No 10
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=98.15 E-value=0.00071 Score=71.13 Aligned_cols=279 Identities=19% Similarity=0.180 Sum_probs=158.5
Q ss_pred CcEEEEEE-cCCCCChHHHHHHHHHhCCCeEEEEEEEE--cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcceee
Q 015208 19 DPCVITVN-CPDKTGLGCDLCRIILFFGLSIVRGDVST--DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVL 95 (411)
Q Consensus 19 ~~~~V~v~-~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t--dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~~ 95 (411)
+.+.|++. .++.||..+++-+.|+++|+||---..+. +|. .-..|.|....-.....+.+.+...+.... . ...
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~-~~Isftv~~~~~~~a~~~l~~~~~el~~~~-~-~~~ 345 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNS-NDIAFTVVKDLLNTAEAVTSAIAPALRSYP-E-ADQ 345 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTE-EEEEEEECGGGHHHHHHHHHHHGGGGSSST-T-CSS
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCC-ceEEEEEeHHHHHHHHHHHHHHHHHhhccc-c-ccC
Confidence 34455555 47899999999999999999984322221 343 335566664321122222233333221000 0 000
Q ss_pred eecccccCCCCCceEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHH
Q 015208 96 YYRAEMQAPKPSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDT 172 (411)
Q Consensus 96 ~~~~~~~~~~~~~~t~i~v~~~---Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l 172 (411)
+.. -....+...|.|++. .+||..+++..+|++.|+||.... |+ .-. -.|.|.. +..++.
T Consensus 346 ~~~----v~~~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS-e~~--Is~vI~~--------~d~~~A 408 (600)
T 3l76_A 346 EAE----IIVEKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TS-EVK--VSCVIDQ--------RDADRA 408 (600)
T ss_dssp SSE----EEEECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC-SSE--EEEEEEG--------GGHHHH
T ss_pred cce----eEecCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cC-CCE--EEEEEcH--------HHHHHH
Confidence 000 012346889999985 689999999999999999996544 52 221 2355532 223444
Q ss_pred HHHHHHHHcccccccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEe-
Q 015208 173 YEHLKTILGNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVC- 251 (411)
Q Consensus 173 ~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~- 251 (411)
.+.|.+.+.... . + ..++. ..+ ....=+-|..+ ++.+.|++.+
T Consensus 409 v~aLh~~f~~~~-----------t--~-----~~~~~--~~~------------~~~~v~Gia~~----~~~a~i~i~~~ 452 (600)
T 3l76_A 409 IAALSNAFGVTL-----------S--P-----PKNQT--DTS------------HLPAVRGVALD----QDQAQIAIRHV 452 (600)
T ss_dssp HHHHHHHTTCCB-----------C--C-----CCCCC--C---------------CCSCCEEEEE----CSEEEEEEEEE
T ss_pred HHHHHHhhcccC-----------C--C-----ccccc--ccc------------ccCceEEEEee----CCEEEEEEecC
Confidence 456666664311 0 0 00000 000 00112345544 3566777754
Q ss_pred CCchhHHHHHHHHHHhCCeEEEEEEEEeeec---CceEEE-EEEEecCCCcCCCHHHHHHHHHHHHHHHcCCc---eEEE
Q 015208 252 QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEID-LFIMQADGKKIVDPSKQNGLSSRLWMELLQPL---RVTV 324 (411)
Q Consensus 252 ~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~---g~~~~d-~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~---~~~i 324 (411)
+|+||+.++|...|++.|+||.--.-+.... |....| .|.+. .+.+++..+.|.+ +...+ .+.+
T Consensus 453 ~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~--------~~d~~~a~~~l~~-~~~~~~~~~v~~ 523 (600)
T 3l76_A 453 PDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVA--------EGDSSQAEAILQP-LIKDWLDAAIVV 523 (600)
T ss_dssp ESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEE--------HHHHHHHHHHHHH-HTTTSTTCEEEE
T ss_pred CCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEe--------HHHHHHHHHHHHH-HHHhcCCceEEE
Confidence 8999999999999999999996222211111 211222 35554 2344455455433 33322 2222
Q ss_pred eccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 325 VSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 325 ~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
. .+ -..+.++|. .+||+-..+-++|++.||||.-..++
T Consensus 524 ~-~~-------~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mistS 564 (600)
T 3l76_A 524 N-KA-------IAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIATS 564 (600)
T ss_dssp E-CC-------EEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEEEC
T ss_pred e-CC-------eEEEEEECcccccCccHHHHHHHHHHHCCCceEEEEcC
Confidence 1 11 237889985 99999999999999999999988876
No 11
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.04 E-value=9.5e-05 Score=63.00 Aligned_cols=100 Identities=16% Similarity=0.115 Sum_probs=66.2
Q ss_pred eEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcCCceEEE
Q 015208 245 TLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPLRVTV 324 (411)
Q Consensus 245 tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~i 324 (411)
..++|.-+|+||.+++++..|++.|+||..-.+. ...+ + .++.++ .+++ ++.++.|.. . ...+..
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~--~~~~-~-~~~~~~-----~~d~---~~a~~~L~~-~--G~~v~~ 71 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIA--ENAD-F-GILRGI-----VSDP---DKAYKALKD-N--HFAVNI 71 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEE--ECSS-C-EEEEEE-----ESCH---HHHHHHHHH-T--TCCEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEE--ecCC-C-CEEEEE-----eCCH---HHHHHHHHH-c--CCeEee
Confidence 4678889999999999999999999999966554 1222 1 122222 1233 333444432 1 111100
Q ss_pred eccCCCccccccceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 325 VSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 325 ~~~~~~~~~~~~~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
...+-+.-.|+||.+.+++++|++.|+||..+-+.
T Consensus 72 -----------~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 72 -----------TDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp -----------EEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred -----------eeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 11355566799999999999999999999876654
No 12
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.83 E-value=0.00029 Score=67.17 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=52.6
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE---cCcEEEEEEEEEcCCCccHHHHHHHHHhhC
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST---DGKWCYIVFWVIGDSQTRWGLLKKRLMGAC 85 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t---dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l 85 (411)
....++|.|+|||||.++++++|+++|+||.+++.++ .|. |.-...+..+.+.+.+.+++.|+...
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~-Ffmr~~~~~~~~~~~~~L~~~f~~la 75 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGR-FFIRVEFRQPDDFDEAGFRAGLAERS 75 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTE-EEEEEEEECCSSCCHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCe-eEEEEEEecCCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999986 444 55566666555456777887776653
No 13
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.82 E-value=8.9e-05 Score=57.21 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=46.5
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHH
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRL 312 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L 312 (411)
..+.|.+.+.||||+|++|+.+|+++|+||.+.... +.++.+...|.+. +.+++.++++.+.|
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~--~~~~~~~~~i~v~-----~~~~~~l~~l~~~L 66 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLN--AKDGIFTCNLMIF-----VKNTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEE--ECSSEEEEEEEEE-----ESSHHHHHHHHHHH
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEE--EcCCEEEEEEEEE-----ECCHHHHHHHHHHH
Confidence 346789999999999999999999999999988887 4444444444444 23345666665554
No 14
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.82 E-value=0.0001 Score=56.86 Aligned_cols=50 Identities=14% Similarity=0.270 Sum_probs=41.3
Q ss_pred ceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEc
Q 015208 108 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 158 (411)
Q Consensus 108 ~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~ 158 (411)
-.+.|.|.++||||+|++|+++|++.|+||.+..+.+ .++.+...|.+..
T Consensus 4 ~~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~-~~~~~~~~i~v~~ 53 (88)
T 2ko1_A 4 FLAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNA-KDGIFTCNLMIFV 53 (88)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEE-CSSEEEEEEEEEE
T ss_pred EEEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEE-cCCEEEEEEEEEE
Confidence 3578899999999999999999999999999999987 4446666665533
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.77 E-value=9.6e-05 Score=71.00 Aligned_cols=68 Identities=12% Similarity=0.259 Sum_probs=52.9
Q ss_pred CCCcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEc--CcEEEEEEEEEcCCC-ccHHHHHHHHHhh
Q 015208 17 EGDPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTD--GKWCYIVFWVIGDSQ-TRWGLLKKRLMGA 84 (411)
Q Consensus 17 ~~~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~td--g~~~~d~f~V~~~~g-~~~~~l~~~L~~~ 84 (411)
......+++.|+|||||.++|+++|+++|+||++++.+.| ..+|.-...+..+.+ .+.+.|++.|+..
T Consensus 19 ~~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~~~~~~L~~~l~~l 89 (302)
T 3o1l_A 19 GMRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLPFDLDGFREAFTPI 89 (302)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSSSCHHHHHHHHHHH
T ss_pred ccceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999874 344656666665443 4567777777654
No 16
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.71 E-value=0.0005 Score=65.64 Aligned_cols=117 Identities=14% Similarity=0.165 Sum_probs=74.6
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE---cCcEEEEEEEEEcCCC-ccHHHHHHHHHhhCCCCCCcceee
Q 015208 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST---DGKWCYIVFWVIGDSQ-TRWGLLKKRLMGACPSCSSASVVL 95 (411)
Q Consensus 20 ~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t---dg~~~~d~f~V~~~~g-~~~~~l~~~L~~~l~~~~~~~~~~ 95 (411)
...+++.|+|||||.++++++|+++|+||.+++.++ .|. |.-...+.-+.+ .+.+.+++.|+..... ... .
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~-Ffmr~~~~~~~~~~~~~~L~~~f~~la~~-~~m---~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGH-FFMRVVFNAAAKVIPLASLRTGFGVIAAK-FTM---G 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTE-EEEEEEEEESSCCCCHHHHHHHHHHHHHH-TTC---E
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCc-eEEEEEEEcCCCCCCHHHHHHHHHHHHHH-cCC---E
Confidence 468999999999999999999999999999999975 444 656666655543 4667787777654321 111 0
Q ss_pred eecccccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCC
Q 015208 96 YYRAEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP 146 (411)
Q Consensus 96 ~~~~~~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~ 146 (411)
+. +... .....|-|....+---|.++......-.+++.-+-+.+.+
T Consensus 81 ~~---l~~~--~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~ 126 (288)
T 3obi_A 81 WH---MRDR--ETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNH 126 (288)
T ss_dssp EE---EEET--TSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESS
T ss_pred EE---eecc--CCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCC
Confidence 00 0111 1123444444444446777777777666655445555533
No 17
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.71 E-value=0.00097 Score=58.29 Aligned_cols=108 Identities=16% Similarity=0.126 Sum_probs=76.5
Q ss_pred CCcEEEEEEc-CCCCChHHHHHHHHHhCCCeEEEEEEE--EcCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCccee
Q 015208 18 GDPCVITVNC-PDKTGLGCDLCRIILFFGLSIVRGDVS--TDGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVV 94 (411)
Q Consensus 18 ~~~~~V~v~~-~Dr~Gl~~~i~~~L~~~glnI~~a~i~--tdg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~ 94 (411)
.+...|+|.+ +|+||.++++.+.|+++|+||.--..+ .+|. ..-.|.|... +.+...+.|++.... ....
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~-~~isf~v~~~---~~~~a~~~l~~~~~~-l~~~-- 95 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGT-TDFSFTVPRG---DYKQTLEILSERQDS-IGAA-- 95 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CE-EEEEEEECGG---GHHHHHHHHHHSSTT-TTCS--
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCe-eEEEEEEech---HHHHHHHHHHHHHHH-cCCc--
Confidence 3678889984 999999999999999999999865543 2554 4456777642 233344556653321 1110
Q ss_pred eeecccccCCCCCceEEEEEEecC---cccHHHHHHHHHHhCCceEEE
Q 015208 95 LYYRAEMQAPKPSDVFLLKLSCYD---RKGLLYDVTAVLCELELTIEK 139 (411)
Q Consensus 95 ~~~~~~~~~~~~~~~t~i~v~~~D---r~GLl~~i~~~L~~~glnI~~ 139 (411)
. -....+...|.|++.+ +||.++++..+|+++|+||..
T Consensus 96 ---~----i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ 136 (167)
T 2re1_A 96 ---S----IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM 136 (167)
T ss_dssp ---E----EEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE
T ss_pred ---e----EEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE
Confidence 0 0123468899999977 999999999999999999987
No 18
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.65 E-value=0.0017 Score=61.86 Aligned_cols=118 Identities=11% Similarity=0.094 Sum_probs=69.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcC--Cc
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ--PL 320 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~--~~ 320 (411)
..++|++.|+|||||++.|+..|+++|+||.++.-......+.|.-...++..... ...++|+++|.+ +.. .+
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~----~~~~~L~~~f~~-la~~~~m 79 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV----IPLASLRTGFGV-IAAKFTM 79 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC----CCHHHHHHHHHH-HHHHTTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC----CCHHHHHHHHHH-HHHHcCC
Confidence 34799999999999999999999999999998886422234444322222322111 135677777643 333 23
Q ss_pred eEEEeccCCCccccccceEEEEeCCCCchHHHHHHHHHhCCe--eEEEEEecc
Q 015208 321 RVTVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLDI--CIFSAEIGR 371 (411)
Q Consensus 321 ~~~i~~~~~~~~~~~~~~~~v~~~DRpGil~dvt~~l~~~gi--~I~~~~~~~ 371 (411)
++.+..... ..++-|-...+.--+.++-...++-.+ .|.-.-+++
T Consensus 80 ~~~l~~~~~------~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~ 126 (288)
T 3obi_A 80 GWHMRDRET------RRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVSNH 126 (288)
T ss_dssp EEEEEETTS------CEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESS
T ss_pred EEEeeccCC------CcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEcCC
Confidence 444443221 124444444555677777777665443 444444444
No 19
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.65 E-value=0.00052 Score=65.45 Aligned_cols=71 Identities=10% Similarity=0.018 Sum_probs=47.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcCC
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 319 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 319 (411)
..+++++.|+|||||++.|+..|+++|+||.++.-.++...+.|.-...++..+ . ...++|+++|.+ +..+
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-~----~~~~~L~~~f~~-la~~ 77 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-D----FDEAGFRAGLAE-RSEA 77 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-S----CCHHHHHHHHHH-HHGG
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-C----CCHHHHHHHHHH-HHHH
Confidence 357999999999999999999999999999988865322334332211122111 1 235778888743 4443
No 20
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.65 E-value=0.00027 Score=61.87 Aligned_cols=111 Identities=16% Similarity=0.073 Sum_probs=72.5
Q ss_pred CCceEEEEEe-CCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcCCc
Q 015208 242 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQPL 320 (411)
Q Consensus 242 ~~~tvi~v~~-~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~ 320 (411)
++.+.|+|.+ +|+||.++++..+|+++|+||..-..+. +.++...=.|++.. +..++..+.|.+ +...+
T Consensus 23 ~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~-~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l 92 (167)
T 2re1_A 23 KNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNV-GSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI 92 (167)
T ss_dssp CCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT
T ss_pred CCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCC-CCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc
Confidence 3567888885 9999999999999999999998444321 11122222355542 122333444433 32222
Q ss_pred eE---EEeccCCCccccccceEEEEeCC---CCchHHHHHHHHHhCCeeEEEEEec
Q 015208 321 RV---TVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 321 ~~---~i~~~~~~~~~~~~~~~~v~~~D---RpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
.. .+ .++ ...+.|.|.+ +||++..+..+|++.|+||....++
T Consensus 93 ~~~~i~~-~~~-------~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~ists 140 (167)
T 2re1_A 93 GAASIDG-DDT-------VCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTS 140 (167)
T ss_dssp TCSEEEE-ESS-------EEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CCceEEe-cCC-------EEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEEEcc
Confidence 22 11 111 2378999987 9999999999999999999987644
No 21
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.62 E-value=0.00063 Score=64.90 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=69.9
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE---cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcceee
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST---DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVL 95 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t---dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~~ 95 (411)
....+++.|+|||||.++|+++|+++|+||++++.++ .|. |.-...+..+. ..++.+++.|+..... ... .
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~-Ffmr~~~~~~~-~~~~~L~~~f~~la~~-~~m---~ 79 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSK-FFMRVSVEIPV-AGVNDFNSAFGKVVEK-YNA---E 79 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTE-EEEEEEEECCC----CHHHHHHHHHHGG-GTC---E
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCe-EEEEEEEEcCC-CCHHHHHHHHHHHHHH-cCC---e
Confidence 4578999999999999999999999999999999975 444 55555555433 2455777777654321 111 1
Q ss_pred eecccccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCC
Q 015208 96 YYRAEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP 146 (411)
Q Consensus 96 ~~~~~~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~ 146 (411)
+. +....... .|-|...-+---|.++......-.+++.-+-+.+.+
T Consensus 80 ~~---l~~~~~~~--ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~ 125 (287)
T 3nrb_A 80 WW---FRPRTDRK--KVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNH 125 (287)
T ss_dssp EE---EEETTCCC--EEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESS
T ss_pred eE---eeccCCCc--EEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCC
Confidence 10 01111122 333333333345777777776655544335555544
No 22
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.61 E-value=0.00024 Score=68.00 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=49.6
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE---cCcEEEEEEEEEcC--C-CccHHHHHHHHHhh
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST---DGKWCYIVFWVIGD--S-QTRWGLLKKRLMGA 84 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t---dg~~~~d~f~V~~~--~-g~~~~~l~~~L~~~ 84 (411)
....+++.|+|||||.++|+++|+++|+||.+++.++ .|. |.-...+..+ . +.+.+.+++.|+..
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~-Ffmr~~~~~~~~~~~~~~~~L~~~f~~l 79 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSAR-FFVRCVFHATDDADALRVDALRREFEPI 79 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTE-EEEEEEEEECC----CCHHHHHHHHHHH
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCc-eEEEEEEEccCcccCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999985 444 5445555444 3 34567777777654
No 23
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.57 E-value=0.00057 Score=59.76 Aligned_cols=112 Identities=14% Similarity=0.142 Sum_probs=71.9
Q ss_pred CCceEEEEEe-CCchhHHHHHHHHHHhCCeEEEEEEEEeeec---CceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHc
Q 015208 242 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 317 (411)
Q Consensus 242 ~~~tvi~v~~-~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~---g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~ 317 (411)
++.+.|++.+ +|+||.++++..+|++.|+||.. |+.... .+...=.|.+..+ +.++..++-+.+...+.
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~~-----d~~~a~~~L~~~~~~~~ 86 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKKD-----FAQEALEALEPVLAEIG 86 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEGG-----GHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEehH-----HHHHHHHHHHHHHHHhC
Confidence 4678888887 89999999999999999999984 431111 1122224666421 11222222222333343
Q ss_pred CCceEEEeccCCCccccccceEEEEeCC---CCchHHHHHHHHHhCCeeEEEEEec
Q 015208 318 QPLRVTVVSRGPDTELLVANPVELSGKG---RPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~v~~~D---RpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
- .+.+. .+ ...+.++|.+ +||++..+.++|++.||||.-..++
T Consensus 87 ~--~v~~~-~~-------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S 132 (167)
T 2dt9_A 87 G--EAILR-PD-------IAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMIATS 132 (167)
T ss_dssp C--EEEEE-CS-------EEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred C--cEEEe-CC-------EEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEEEcc
Confidence 1 33331 11 2378999987 9999999999999999999666544
No 24
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.50 E-value=0.0027 Score=60.45 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=69.0
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEe--cCCCcCCCHHHHHHHHHHHHHHHcCCc
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQ--ADGKKIVDPSKQNGLSSRLWMELLQPL 320 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~--~~g~~~~~~~~~~~l~~~L~~~l~~~~ 320 (411)
..++|++.|+|||||++.|+..|+++|+||.++.-......+. |++. .+... ...+.|+++|.+ +..++
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~----Ffmr~~~~~~~----~~~~~L~~~f~~-la~~~ 76 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSK----FFMRVSVEIPV----AGVNDFNSAFGK-VVEKY 76 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTE----EEEEEEEECCC-------CHHHHHHHH-HHGGG
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCe----EEEEEEEEcCC----CCHHHHHHHHHH-HHHHc
Confidence 4579999999999999999999999999999888642223443 4332 11111 123467777643 44433
Q ss_pred --eEEEeccCCCccccccceEEEEeCCCCchHHHHHHHHHhCC--eeEEEEEecc
Q 015208 321 --RVTVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKMLD--ICIFSAEIGR 371 (411)
Q Consensus 321 --~~~i~~~~~~~~~~~~~~~~v~~~DRpGil~dvt~~l~~~g--i~I~~~~~~~ 371 (411)
.+.+..... ..++-|....+---+.++-...++-. +.|.-.=+++
T Consensus 77 ~m~~~l~~~~~------~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Visn~ 125 (287)
T 3nrb_A 77 NAEWWFRPRTD------RKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIISNH 125 (287)
T ss_dssp TCEEEEEETTC------CCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEESS
T ss_pred CCeeEeeccCC------CcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEeCC
Confidence 344443221 12444444445567777777766544 4565555554
No 25
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.40 E-value=0.00066 Score=60.08 Aligned_cols=110 Identities=18% Similarity=0.119 Sum_probs=71.4
Q ss_pred CCceEEEEE-eCCchhHHHHHHHHHHhCCeEEEEEEEEeeec---CceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHc
Q 015208 242 PGHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR---GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 317 (411)
Q Consensus 242 ~~~tvi~v~-~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~---g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~ 317 (411)
++.+.|+|. .+|+||.++++...|++.|+||..-..+ +. .+...=.|.+.. +..++..+.|.+ +.
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s--~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~ 81 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQN--VSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQ 81 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEEC--CCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcC--CCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HH
Confidence 466778884 6999999999999999999999844433 22 111111255542 223444444433 22
Q ss_pred CCce---EEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 318 QPLR---VTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 318 ~~~~---~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
..+. +.+. .. ...+.+.|. ++||+...+.++|++.||||.-..++
T Consensus 82 ~~~~~~~v~~~-~~-------~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~istS 132 (178)
T 2dtj_A 82 VQGNWTNVLYD-DQ-------VGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS 132 (178)
T ss_dssp TTTTCSEEEEE-SC-------EEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HhcCCCeEEEe-CC-------eEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEEEcC
Confidence 2211 2111 11 237888887 89999999999999999999887644
No 26
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.36 E-value=0.0037 Score=59.92 Aligned_cols=67 Identities=13% Similarity=0.113 Sum_probs=44.9
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHH
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLW 313 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~ 313 (411)
..+++++.|+|||||++.|+..|+++|+||.++.-..+...+.|.-...+...+.. ...+.|+++|.
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~----~~~~~L~~~l~ 87 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLP----FDLDGFREAFT 87 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSS----SCHHHHHHHHH
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCC----CCHHHHHHHHH
Confidence 34789999999999999999999999999998887632224443321222211111 13567777764
No 27
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.31 E-value=0.0058 Score=58.31 Aligned_cols=44 Identities=9% Similarity=0.046 Sum_probs=36.2
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceE
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCE 286 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~ 286 (411)
..+++++.|+|||||++.|+..|+++|+||.++.-..+...+.|
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~F 52 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARF 52 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEE
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCce
Confidence 45799999999999999999999999999998886532233433
No 28
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.19 E-value=0.14 Score=53.59 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=117.8
Q ss_pred CCcEEEEEEcC---CCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcce-
Q 015208 18 GDPCVITVNCP---DKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASV- 93 (411)
Q Consensus 18 ~~~~~V~v~~~---Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~- 93 (411)
.+...|.|++. ++||+.+++..+|.+.|.||.-.. +... -..|.|... +.+...+.|.+.+........
T Consensus 353 ~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--tSe~--~Is~vI~~~---d~~~Av~aLh~~f~~~~t~~~~ 425 (600)
T 3l76_A 353 KGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--TSEV--KVSCVIDQR---DADRAIAALSNAFGVTLSPPKN 425 (600)
T ss_dssp CSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--ECSS--EEEEEEEGG---GHHHHHHHHHHHTTCCBCCCCC
T ss_pred CCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--cCCC--EEEEEEcHH---HHHHHHHHHHHhhcccCCCccc
Confidence 46788999976 799999999999999999997544 3332 245555532 333444566666532210000
Q ss_pred --eeeecccc-cCCCCCceEEEEEEe-cCcccHHHHHHHHHHhCCceEEEEEEEeCC---CC--eEEEEEEEEcCCCcCC
Q 015208 94 --VLYYRAEM-QAPKPSDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTTP---DG--KVMDLFFVTDTRELLH 164 (411)
Q Consensus 94 --~~~~~~~~-~~~~~~~~t~i~v~~-~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~---~~--~~~d~F~V~~~~~~~~ 164 (411)
.....+.+ .-....+...|+|.. +|+||+.++|.+.|+++|+||.--...... +| ..--.|.|..
T Consensus 426 ~~~~~~~~~v~Gia~~~~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~------ 499 (600)
T 3l76_A 426 QTDTSHLPAVRGVALDQDQAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE------ 499 (600)
T ss_dssp CCC---CCSCCEEEEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH------
T ss_pred cccccccCceEEEEeeCCEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH------
Confidence 00000000 011234667777765 999999999999999999999543333211 24 2333465522
Q ss_pred CHhHHHHHHHHHHHHHcccccccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCc
Q 015208 165 TRKRKEDTYEHLKTILGNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGH 244 (411)
Q Consensus 165 ~~~~~~~l~~~L~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~ 244 (411)
+.+++..+.|.+ +..+. .+.+|.++ ++.
T Consensus 500 --~d~~~a~~~l~~-~~~~~---------------------------------------------~~~~v~~~----~~~ 527 (600)
T 3l76_A 500 --GDSSQAEAILQP-LIKDW---------------------------------------------LDAAIVVN----KAI 527 (600)
T ss_dssp --HHHHHHHHHHHH-HTTTS---------------------------------------------TTCEEEEE----CCE
T ss_pred --HHHHHHHHHHHH-HHHhc---------------------------------------------CCceEEEe----CCe
Confidence 233444333433 22110 01234444 357
Q ss_pred eEEEEEe---CCchhHHHHHHHHHHhCCeEEEE
Q 015208 245 TLVQIVC---QDHKGLLYDIMRTLKDYNIQVSY 274 (411)
Q Consensus 245 tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~ 274 (411)
..|.+.| +.+||+.+.+.++|++.|+||..
T Consensus 528 akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~m 560 (600)
T 3l76_A 528 AKVSIVGSGMIGHPGVAAHFFAALAQENINIEM 560 (600)
T ss_dssp EEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCE
T ss_pred EEEEEECcccccCccHHHHHHHHHHHCCCceEE
Confidence 8888988 69999999999999999999983
No 29
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.16 E-value=0.0017 Score=56.76 Aligned_cols=66 Identities=17% Similarity=0.171 Sum_probs=52.4
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCC-CeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHH
Q 015208 109 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTIL 180 (411)
Q Consensus 109 ~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~-~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L 180 (411)
...|.|...|+||+|++|+++|++.|+||.+..+.++.+ +...-+|.|. . ++..+++|.+.|.+..
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~-----d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G-----DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S-----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c-----cHHHHHHHHHHHcCCC
Confidence 367899999999999999999999999999999986554 6666667774 2 2556778877777743
No 30
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.16 E-value=0.0093 Score=52.56 Aligned_cols=137 Identities=16% Similarity=0.088 Sum_probs=86.3
Q ss_pred CCcEEEEE-EcCCCCChHHHHHHHHHhCCCeEEEEEEEE----cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcc
Q 015208 18 GDPCVITV-NCPDKTGLGCDLCRIILFFGLSIVRGDVST----DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSAS 92 (411)
Q Consensus 18 ~~~~~V~v-~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t----dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~ 92 (411)
.+.+.|+| ..+|+||.++++.+.|.++|+||.--..++ +|. .--.|.+.. .+.+...+.|++.... ....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~-~~isf~v~~---~d~~~a~~~l~~~~~~-~~~~ 87 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGT-TDITFTCPR---SDGRRAMEILKKLQVQ-GNWT 87 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCE-EEEEEEEEH---HHHHHHHHHHHTTTTT-TTCS
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCc-eEEEEEEcc---ccHHHHHHHHHHHHHh-cCCC
Confidence 35778888 469999999999999999999998654432 333 222366663 1223344555553221 1110
Q ss_pred eeeeecccccCCCCCceEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHH
Q 015208 93 VVLYYRAEMQAPKPSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRK 169 (411)
Q Consensus 93 ~~~~~~~~~~~~~~~~~t~i~v~~~---Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~ 169 (411)
. + ....+...|.|++. +.||.++++..+|++.|+||.. |.|+. -. -.|.|. ++..
T Consensus 88 --~-----v--~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--istSe-~~--Is~vV~--------~~d~ 145 (178)
T 2dtj_A 88 --N-----V--LYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--ISTSE-IR--ISVLIR--------EDDL 145 (178)
T ss_dssp --E-----E--EEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEEET-TE--EEEEEE--------GGGH
T ss_pred --e-----E--EEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEcCC-Ce--EEEEEe--------HHHH
Confidence 0 0 12346788999986 8899999999999999999986 43423 22 234442 2334
Q ss_pred HHHHHHHHHHHc
Q 015208 170 EDTYEHLKTILG 181 (411)
Q Consensus 170 ~~l~~~L~~~L~ 181 (411)
++..+.|.+.+.
T Consensus 146 ~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 146 DAAARALHEQFQ 157 (178)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 444455666664
No 31
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.09 E-value=0.023 Score=49.39 Aligned_cols=108 Identities=16% Similarity=0.203 Sum_probs=72.4
Q ss_pred CceEEEEEEe-cCcccHHHHHHHHHHhCCceEEEEEEEeC--CCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHccc
Q 015208 107 SDVFLLKLSC-YDRKGLLYDVTAVLCELELTIEKVKISTT--PDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNA 183 (411)
Q Consensus 107 ~~~t~i~v~~-~Dr~GLl~~i~~~L~~~glnI~~A~I~T~--~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~ 183 (411)
.+.+.|+|.+ +|+||.++++.+.|+++|+||........ ..|..--.|.|...+ .++..+.|.+....
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d--------~~~a~~~L~~~~~~- 84 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDF--------AQEALEALEPVLAE- 84 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGG--------HHHHHHHHHHHHHH-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHH--------HHHHHHHHHHHHHH-
Confidence 4677888876 89999999999999999999975433221 123444567774321 22233333331110
Q ss_pred ccccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeCC---chhHHHH
Q 015208 184 MISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQD---HKGLLYD 260 (411)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~D---RpGLL~~ 260 (411)
+ .. .+.++ ++...+++.|.+ +||+++.
T Consensus 85 --------------------------~------------------~~--~v~~~----~~~a~vsvVG~gm~~~~Gv~a~ 114 (167)
T 2dt9_A 85 --------------------------I------------------GG--EAILR----PDIAKVSIVGVGLASTPEVPAK 114 (167)
T ss_dssp --------------------------H------------------CC--EEEEE----CSEEEEEEEESSGGGSTHHHHH
T ss_pred --------------------------h------------------CC--cEEEe----CCEEEEEEECCCcccCcCHHHH
Confidence 0 00 23332 367889999977 9999999
Q ss_pred HHHHHHhCCeEEE
Q 015208 261 IMRTLKDYNIQVS 273 (411)
Q Consensus 261 i~~~l~~~g~~i~ 273 (411)
+..+|++.|+||.
T Consensus 115 ~f~aL~~~~InI~ 127 (167)
T 2dt9_A 115 MFQAVASTGANIE 127 (167)
T ss_dssp HHHHHHHTTCCCC
T ss_pred HHHHHHHCCCCEE
Confidence 9999999999996
No 32
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.97 E-value=0.053 Score=47.86 Aligned_cols=111 Identities=17% Similarity=0.186 Sum_probs=72.6
Q ss_pred ceEEEEEE-ecCcccHHHHHHHHHHhCCceEEEEEEEeCC--CCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHcccc
Q 015208 108 DVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 184 (411)
Q Consensus 108 ~~t~i~v~-~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~--~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~ 184 (411)
+.+.|+|. .+|+||.+++|...|+++|+||..-...... .|..--.|.|...+ .++..+.|.+ +..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~--------~~~a~~~L~~-~~~-- 83 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV--------GPAAVEKLDS-LRN-- 83 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT--------HHHHHHHHHH-THH--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH--------HHHHHHHHHH-HHH--
Confidence 45666665 4899999999999999999999644332222 45555567774432 1222222333 111
Q ss_pred cccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeC---CchhHHHHH
Q 015208 185 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDI 261 (411)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~i 261 (411)
.+ ....|.++ ++...|.+.|. ++||+.+.+
T Consensus 84 ------------------------el-------------------~~~~v~~~----~~va~VsvVG~gm~~~~Gvaa~~ 116 (181)
T 3s1t_A 84 ------------------------EI-------------------GFSQLLYD----DHIGKVSLIGAGMRSHPGVTATF 116 (181)
T ss_dssp ------------------------HH-------------------CCSEEEEE----SCEEEEEEEEECCTTCHHHHHHH
T ss_pred ------------------------hc-------------------CcceEEEe----CCEEEEEEEecccccCchHHHHH
Confidence 00 01134443 25678888886 899999999
Q ss_pred HHHHHhCCeEEEEEE
Q 015208 262 MRTLKDYNIQVSYGR 276 (411)
Q Consensus 262 ~~~l~~~g~~i~~a~ 276 (411)
.++|++.|+||....
T Consensus 117 f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 117 CEALAAVGVNIELIS 131 (181)
T ss_dssp HHHHHHTTCCCCEEE
T ss_pred HHHHHHCCCcEEEEE
Confidence 999999999998444
No 33
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.91 E-value=0.0032 Score=54.94 Aligned_cols=65 Identities=14% Similarity=0.200 Sum_probs=51.6
Q ss_pred EEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCC-CCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHH
Q 015208 110 FLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP-DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTIL 180 (411)
Q Consensus 110 t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~-~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L 180 (411)
..|.|...|+||+|++|+++|++.|+||.+..+..+. .|...-+|.|.. ++..+++|.+.|.+..
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCCC
Confidence 5788999999999999999999999999999997655 466666666642 2456777877777744
No 34
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.79 E-value=0.0011 Score=57.92 Aligned_cols=34 Identities=6% Similarity=-0.070 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 337 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 337 ~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
+.+++...||||+|.+|+.+|+++|+||.++.+.
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~ 37 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVA 37 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceee
Confidence 4789999999999999999999999999999997
No 35
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.49 E-value=0.0048 Score=53.83 Aligned_cols=34 Identities=9% Similarity=-0.001 Sum_probs=32.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 337 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 337 ~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
+.+++...||||+|.+|+.+|+++|+||.++.+.
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~ 38 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVA 38 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEE
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEE
Confidence 5788999999999999999999999999999997
No 36
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.38 E-value=0.035 Score=49.02 Aligned_cols=113 Identities=17% Similarity=0.089 Sum_probs=69.8
Q ss_pred CceEEEEE-eCCchhHHHHHHHHHHhCCeEEEEEEEEeeec--CceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcCC
Q 015208 243 GHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 319 (411)
Q Consensus 243 ~~tvi~v~-~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~--g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 319 (411)
+.+.|+|. -+|+||++++|..+|++.|+||..-.-+. .. .+...=.|++..+ +.+...++-+.+...+. .
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~-s~~~~g~~~isftv~~~-----~~~~a~~~L~~~~~el~-~ 87 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNV-SKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG-F 87 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECC-CCTTTCEEEEEEEEETT-----THHHHHHHHHHTHHHHC-C
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecC-CcccCCccEEEEEEehh-----HHHHHHHHHHHHHHhcC-c
Confidence 45666664 47999999999999999999998322111 11 2333334666521 11122221122222231 1
Q ss_pred ceEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 320 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
..+.+. .+ -..+.++|. ++||+...+.++|++.||||....++
T Consensus 88 ~~v~~~-~~-------va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~IstS 133 (181)
T 3s1t_A 88 SQLLYD-DH-------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS 133 (181)
T ss_dssp SEEEEE-SC-------EEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred ceEEEe-CC-------EEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEEcC
Confidence 223221 11 227888887 89999999999999999999888755
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.31 E-value=0.015 Score=51.74 Aligned_cols=66 Identities=12% Similarity=0.243 Sum_probs=49.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCC-CeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHH
Q 015208 109 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPD-GKVMDLFFVTDTRELLHTRKRKEDTYEHLKTIL 180 (411)
Q Consensus 109 ~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~-~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L 180 (411)
...|.|...|+||.|++|+++|+..|+||.+..+..+.+ +..--++.|... +..+++|.+.|.+..
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 578999999999999999999999999999988874344 655556666433 234567777766644
No 38
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=96.27 E-value=0.014 Score=52.56 Aligned_cols=113 Identities=17% Similarity=0.103 Sum_probs=70.1
Q ss_pred CCceEEEEEe-CCchhHHHHHHHHHHhCCeEEEEEEEEee--ecCc-eEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHc
Q 015208 242 PGHTLVQIVC-QDHKGLLYDIMRTLKDYNIQVSYGRFSRR--QRGN-CEIDLFIMQADGKKIVDPSKQNGLSSRLWMELL 317 (411)
Q Consensus 242 ~~~tvi~v~~-~DRpGLL~~i~~~l~~~g~~i~~a~i~~~--t~g~-~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~ 317 (411)
++.+.|++.+ +|+||++++|..+|++.|+||. -|... .... ...-.|.+..+ +.+...++...+...+.
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVD--mI~Qs~s~~~~~~~~~sftv~~~-----d~~~~~~~l~~~~~~~~ 105 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNID--MVLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG 105 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCC--CEECCCCC--CCEEEEEEEEEGG-----GHHHHHHHHHTTHHHHC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceE--EEeeccccccccceEEEEecchh-----hHHHHHHHHHHHHhhhc
Confidence 4667888875 8999999999999999999998 44311 1112 22323554421 11122222222223332
Q ss_pred CCceEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 318 QPLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
. ..+.+. .. -..+.++|. .+||+-..+-++|++.||||.-..++
T Consensus 106 ~-~~v~~~-~~-------iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIstS 152 (200)
T 4go7_X 106 F-SQLLYD-DH-------IGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELISTS 152 (200)
T ss_dssp C-SEEEEE-CC-------EEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred e-eeEEEe-cC-------eeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEEcc
Confidence 1 122221 11 126778776 79999999999999999999988866
No 39
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.25 E-value=0.0074 Score=54.64 Aligned_cols=38 Identities=13% Similarity=-0.039 Sum_probs=30.6
Q ss_pred cceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccc
Q 015208 336 ANPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHM 373 (411)
Q Consensus 336 ~~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~ 373 (411)
+..+.+.+.||||+|++|+.+|++.++||..++..++.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 34789999999999999999999999999999998544
No 40
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.13 E-value=0.014 Score=52.74 Aligned_cols=49 Identities=20% Similarity=0.268 Sum_probs=37.4
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCC----CCeEEEEEEEE
Q 015208 109 VFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTP----DGKVMDLFFVT 157 (411)
Q Consensus 109 ~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~----~~~~~d~F~V~ 157 (411)
...|.|.+.||||+|++|+.+|++++.||...+..+.. ++.+.-.+.+.
T Consensus 4 ~VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~ 56 (223)
T 1y7p_A 4 LRGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIE 56 (223)
T ss_dssp CEEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEEC
T ss_pred eEEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEEC
Confidence 46789999999999999999999999999999998855 56665555553
No 41
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.93 E-value=0.51 Score=47.09 Aligned_cols=108 Identities=22% Similarity=0.238 Sum_probs=72.7
Q ss_pred ceEEEEEE-ecCcccHHHHHHHHHHhCCceEEEEEEEeCC--CCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHcccc
Q 015208 108 DVFLLKLS-CYDRKGLLYDVTAVLCELELTIEKVKISTTP--DGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 184 (411)
Q Consensus 108 ~~t~i~v~-~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~--~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~ 184 (411)
+.+.|+|. .+|+||.+++|.+.|+++|+||......|.. .|...-.|.|...+ . ++..+.|.+ +..+.
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~-----~---~~a~~~l~~-~~~~~ 333 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD-----G---RRAMEILKK-LQVQG 333 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT-----H---HHHHHHHHH-HHTTT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh-----H---HHHHHHHHH-HHHHc
Confidence 45567777 5899999999999999999999765444432 35445567774421 2 222233333 21110
Q ss_pred cccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeC---CchhHHHHH
Q 015208 185 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDI 261 (411)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~i 261 (411)
. ...|.++ .+..+++|.|. ++||++..+
T Consensus 334 ----------------------~-----------------------~~~v~~~----~~~a~vsvVG~gm~~~~Gv~a~~ 364 (421)
T 3ab4_A 334 ----------------------N-----------------------WTNVLYD----DQVGKVSLVGAGMKSHPGVTAEF 364 (421)
T ss_dssp ----------------------T-----------------------CSEEEEE----CCEEEEEEECGGGTSCTTHHHHH
T ss_pred ----------------------C-----------------------CceEEEe----CCeEEEEEEccCcccCccHHHHH
Confidence 0 0124443 35678899985 899999999
Q ss_pred HHHHHhCCeEEE
Q 015208 262 MRTLKDYNIQVS 273 (411)
Q Consensus 262 ~~~l~~~g~~i~ 273 (411)
..+|.+.|+||.
T Consensus 365 f~aL~~~~InI~ 376 (421)
T 3ab4_A 365 MEALRDVNVNIE 376 (421)
T ss_dssp HHHHHHTTCCCC
T ss_pred HHHHHHCCCCEE
Confidence 999999999998
No 42
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.85 E-value=0.031 Score=48.33 Aligned_cols=57 Identities=14% Similarity=0.243 Sum_probs=42.1
Q ss_pred EEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHH
Q 015208 246 LVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRL 312 (411)
Q Consensus 246 vi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L 312 (411)
-|+|.|.||+|||.+|+++|+++++||....+. +.|. +++... ..+.+.+..|...+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~--~~g~-----i~~~~~---~~~~~~~~~L~~~l 58 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEID--PIGR-----IYLNFA---ELEFESFSSLMAEI 58 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEE--TTTE-----EEEEEC---CCCHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEe--cCCE-----EEEEEE---eCCHHHHHHHHHHH
Confidence 378999999999999999999999999988886 4432 344422 22345666666665
No 43
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.81 E-value=0.048 Score=48.53 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=69.7
Q ss_pred cEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEE-E-cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcce-eee
Q 015208 20 PCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVS-T-DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASV-VLY 96 (411)
Q Consensus 20 ~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~-t-dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~-~~~ 96 (411)
...+.|+..|+||.|++++++|+..|+||.+-.+. + +....-.++.|..++ ...+++.+.|.+..+ ... ..+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e-~~ieqL~kQL~KLid----VikV~dl 103 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDD-KTIEQIEKQAYKLVE----VVKVTPI 103 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECT-THHHHHHHHHTTSTT----EEEEEEC
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCH-HHHHHHHHHhcCcCc----eEEEEEe
Confidence 46889999999999999999999999999988885 4 534354566776432 244555555555332 100 001
Q ss_pred ecccccCCCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEE
Q 015208 97 YRAEMQAPKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKV 140 (411)
Q Consensus 97 ~~~~~~~~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A 140 (411)
... -.+........|.|.+... -.+|.+.....+.+|.+.
T Consensus 104 ~~~-~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivDv 143 (193)
T 2fgc_A 104 DPL-PENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIIDV 143 (193)
T ss_dssp CSS-GGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEEE
T ss_pred cCC-CCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEEE
Confidence 000 0011222456777766443 677777777788888653
No 44
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.71 E-value=0.045 Score=47.25 Aligned_cols=59 Identities=15% Similarity=0.291 Sum_probs=43.9
Q ss_pred EEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHH
Q 015208 111 LLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKT 178 (411)
Q Consensus 111 ~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~ 178 (411)
.|+|.+.||+|++++|+++|+.+++||..+.+.+ . |. +++.-+. .+.+.+..+...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~-~-g~----i~~~~~~---~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP-I-GR----IYLNFAE---LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET-T-TE----EEEEECC---CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec-C-CE----EEEEEEe---CCHHHHHHHHHHHHc
Confidence 4789999999999999999999999999999976 3 54 3343331 234556666665555
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.47 E-value=0.021 Score=51.36 Aligned_cols=110 Identities=14% Similarity=0.080 Sum_probs=70.3
Q ss_pred CCcEEEEEE-cCCCCChHHHHHHHHHhCCCeEEEEEEEE---cCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcce
Q 015208 18 GDPCVITVN-CPDKTGLGCDLCRIILFFGLSIVRGDVST---DGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASV 93 (411)
Q Consensus 18 ~~~~~V~v~-~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t---dg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~ 93 (411)
.+...|++. .+|+||+.+++.+.|++.|+||-=--.+. +....-..|.+.... .+...+.|++.... ..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d---~~~~~~~l~~~~~~-~~--- 105 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV---GPAAVEKLDSLRNE-IG--- 105 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGG---HHHHHHHHHTTHHH-HC---
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhh---HHHHHHHHHHHHhh-hc---
Confidence 356777776 59999999999999999999987433321 233244567776422 22232333332110 00
Q ss_pred eeeecccccCCCCCceEEEEEEe---cCcccHHHHHHHHHHhCCceEEEE
Q 015208 94 VLYYRAEMQAPKPSDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKV 140 (411)
Q Consensus 94 ~~~~~~~~~~~~~~~~t~i~v~~---~Dr~GLl~~i~~~L~~~glnI~~A 140 (411)
+... ....+...|.+++ +..||+.+++..+|++.|+||..-
T Consensus 106 --~~~v----~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 106 --FSQL----LYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp --CSEE----EEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred --eeeE----EEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 0000 1223567788877 678999999999999999999743
No 46
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.40 E-value=0.15 Score=50.90 Aligned_cols=111 Identities=18% Similarity=0.119 Sum_probs=70.1
Q ss_pred CCceEEEEE-eCCchhHHHHHHHHHHhCCeEEEEEEEEeeec--CceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcC
Q 015208 242 PGHTLVQIV-CQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR--GNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 318 (411)
Q Consensus 242 ~~~tvi~v~-~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~--g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 318 (411)
++.+.|+|. -+|+||.+++|...|+++|+||..-..++ .. .+...=.|++.. .+.++ ..+.|.+ +..
T Consensus 262 ~~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~-s~~~~g~~~isf~v~~-----~~~~~---a~~~l~~-~~~ 331 (421)
T 3ab4_A 262 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNV-FSVEDGTTDITFTCPR-----SDGRR---AMEILKK-LQV 331 (421)
T ss_dssp CSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECC-CC--CCEEEEEEEEET-----TTHHH---HHHHHHH-HHT
T ss_pred CCEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccC-ccccCCcceEEEEEec-----hhHHH---HHHHHHH-HHH
Confidence 356788888 58999999999999999999998443221 11 112222356652 12222 2233322 222
Q ss_pred Cc---eEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 319 PL---RVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 319 ~~---~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
.+ .+.+. .. ...+.|+|. ++||+...+..+|++.||||.-..++
T Consensus 332 ~~~~~~v~~~-~~-------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~is~S 381 (421)
T 3ab4_A 332 QGNWTNVLYD-DQ-------VGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELISTS 381 (421)
T ss_dssp TTTCSEEEEE-CC-------EEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEEEEE
T ss_pred HcCCceEEEe-CC-------eEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEEEcC
Confidence 21 22221 11 226888886 79999999999999999999866544
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=95.04 E-value=0.11 Score=52.87 Aligned_cols=107 Identities=15% Similarity=0.100 Sum_probs=70.2
Q ss_pred CCceEEEEEe---CCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHH--
Q 015208 242 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMEL-- 316 (411)
Q Consensus 242 ~~~tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l-- 316 (411)
++.+.|+|.+ .++||++.++..+|++.|++|..-.-. + ++ ..=.|.+.. +..++..+.|...+
T Consensus 316 ~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~--t-se-~~Is~~V~~--------~d~~~a~~~L~~~l~~ 383 (473)
T 3c1m_A 316 KNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQG--S-SE-TNISLVVSE--------EDVDKALKALKREFGD 383 (473)
T ss_dssp EEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEEC--C-TT-CCEEEEEEG--------GGHHHHHHHHHHHHCC
T ss_pred CCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEec--C-CC-CEEEEEEec--------hHHHHHHHHHHHHHhh
Confidence 4678899997 688999999999999999999843322 1 22 122366652 12334444455555
Q ss_pred ------cCCc---eEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEE
Q 015208 317 ------LQPL---RVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 368 (411)
Q Consensus 317 ------~~~~---~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~ 368 (411)
...+ .+.+. .. -..+.|+|. ++||+...+..+|++.||||.-..
T Consensus 384 ~~~~~~~~~~~~~~v~~~-~~-------~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mis 439 (473)
T 3c1m_A 384 FGKKSFLNNNLIRDVSVD-KD-------VCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMIA 439 (473)
T ss_dssp ----CTTSCCCEEEEEEE-EE-------EEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEEE
T ss_pred hcccccccccccceEEEe-CC-------cEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEEe
Confidence 3211 12111 11 126888887 599999999999999999995443
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=94.35 E-value=0.092 Score=49.70 Aligned_cols=63 Identities=11% Similarity=0.046 Sum_probs=45.5
Q ss_pred EEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCChh--hHHHHHHH
Q 015208 339 VELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRN--KIEEGVWK 405 (411)
Q Consensus 339 ~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~~~--~~~~~~~~ 405 (411)
+-+.-.|+||-|+++-..|+.+|||+.++++. ..+++.| -|.|||.- .|..-+++ ..++.+++
T Consensus 203 l~f~~~~~pGaL~~~L~~Fa~~gINLtkIESR--P~~~~~~-~Y~FfvD~-eg~~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 203 IVFALPNEQGSLFRALATFALRGIDLTKIESR--PSRKKAF-EYLFYADF-IGHREDQNVHNALENLRE 267 (283)
T ss_dssp EEEEEECCTTHHHHHHHHHHTTTCCEEEEEEE--ECSSSTT-EEEEEEEE-ESCTTSHHHHHHHHHHHT
T ss_pred EEEEcCCCCchHHHHHHHHHHcCCCeeEEEee--EcCCCCc-ceEEEEEE-ecCCCcHHHHHHHHHHHH
Confidence 33344599999999999999999999999998 5555666 45599874 56655544 13444443
No 49
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=94.00 E-value=0.16 Score=51.19 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=71.2
Q ss_pred CCceEEEEEe---CCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcC
Q 015208 242 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQ 318 (411)
Q Consensus 242 ~~~tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 318 (411)
++.+.|++.+ .+.||++++|..+|+++|++|. -|++ ..... .|.+..+. +. ...+++.+.|...+.
T Consensus 296 ~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd--~i~~--~~~~i--s~~V~~~d--~~--~~~~~~~~el~~~~~- 364 (446)
T 3tvi_A 296 KNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFE--HMPS--GVDSV--SLVIEDCK--LD--GKCDKIIEEIKKQCN- 364 (446)
T ss_dssp EEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEE--EBCE--ETTEE--EEEEEHHH--HT--TTHHHHHHHHHHHSC-
T ss_pred CCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEE--EEec--CCCEE--EEEEecch--HH--HHHHHHHHHHHHhcC-
Confidence 3567899987 6999999999999999999998 3431 12222 36665210 11 023344444444332
Q ss_pred CceEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEE
Q 015208 319 PLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 368 (411)
Q Consensus 319 ~~~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~ 368 (411)
...+.+... -..+.++|. .+||+...+..+|++.||||.-..
T Consensus 365 ~~~v~v~~~--------vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 365 PDSIEIHPN--------MALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp CSEEEEEEE--------EEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CCcEEEeCC--------eEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 122322111 227888887 599999999999999999998887
No 50
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=93.86 E-value=0.13 Score=49.81 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=40.2
Q ss_pred CCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCChh
Q 015208 345 GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRN 397 (411)
Q Consensus 345 DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~~~ 397 (411)
|+||-|+++-..|+.+|||+.++++. ..+++.|+ |.|||. ..|..-+++
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLtkIESR--P~~~~~~~-Y~FfiD-~eg~~~d~~ 265 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMTSFISR--PIKGRTGT-YSFIVT-LDAAPWEER 265 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEEEEEEE--EETTEEEE-EEEEEE-ESSCTTSHH
T ss_pred CCCCHHHHHHHHHHHCCcceEEEEee--ECCCCCcc-EEEEEE-EeCCcCCHH
Confidence 79999999999999999999999998 55566664 559976 567766644
No 51
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=93.79 E-value=0.068 Score=53.24 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=47.2
Q ss_pred ceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCC-CCChhhHHHHHHH
Q 015208 337 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGL-SVPRNKIEEGVWK 405 (411)
Q Consensus 337 ~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~-~~~~~~~~~~~~~ 405 (411)
..+-+.-.|+||++..|+.+|.++|+||..+... +.|+.+ +.+.+.++. +++.+ +++.+++
T Consensus 332 ~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~--r~g~~A-----~~vidvD~~~~~~~~-~l~~l~~ 393 (404)
T 1sc6_A 332 RRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQ--TSAQMG-----YVVIDIEADEDVAEK-ALQAMKA 393 (404)
T ss_dssp EEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEE--ECSSEE-----EEEEEEECCHHHHHH-HHHHHHT
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhcc--CCCCEE-----EEEEEcCCCCCCCHH-HHHHHhc
Confidence 3678889999999999999999999999999999 577777 444444443 14445 7777765
No 52
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=93.69 E-value=0.15 Score=48.97 Aligned_cols=64 Identities=16% Similarity=0.145 Sum_probs=46.1
Q ss_pred eEEEEeC-CCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCChh--hHHHHHHH
Q 015208 338 PVELSGK-GRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRN--KIEEGVWK 405 (411)
Q Consensus 338 ~~~v~~~-DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~~~--~~~~~~~~ 405 (411)
++-+.-. |+||-|+++-..|+.+|||+.++++. ..+++.|+ |.|||.- .|..-+++ ..++.|++
T Consensus 203 Sl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESR--P~~~~~~~-Y~FfiD~-eg~~~d~~v~~aL~~L~~ 269 (313)
T 3mwb_A 203 TVVVPLPEDHPGALMEILDQFASRGVNLSRIESR--PTGQYLGH-YFFSIDA-DGHATDSRVADALAGLHR 269 (313)
T ss_dssp EEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEE--ECSSSTTS-EEEEEEE-ESCTTSHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEe--ecCCCCcc-EEEEEEE-eCCCCcHHHHHHHHHHHH
Confidence 4455554 99999999999999999999999997 55555564 5599874 56554543 14445544
No 53
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=93.54 E-value=0.23 Score=46.52 Aligned_cols=49 Identities=10% Similarity=0.176 Sum_probs=39.7
Q ss_pred eEEEEe---CCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcC
Q 015208 338 PVELSG---KGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEG 389 (411)
Q Consensus 338 ~~~v~~---~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~ 389 (411)
++-+.- .|+||-|+++-..|+.+|||+.++++. ..+++.| -|.|||.-.
T Consensus 188 sl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESR--P~~~~~~-~Y~FfiD~e 239 (267)
T 2qmw_A 188 SLMFLITPMHDKPGLLASVLNTFALFNINLSWIESR--PLKTQLG-MYRFFVQAD 239 (267)
T ss_dssp EEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEE--ECSSSTT-CEEEEEEES
T ss_pred EEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEe--ecCCCCc-cEEEEEEEe
Confidence 444555 799999999999999999999999998 5555656 455999864
No 54
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=93.53 E-value=0.19 Score=51.77 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=48.3
Q ss_pred ceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCChhhHHHHHHH
Q 015208 337 NPVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWK 405 (411)
Q Consensus 337 ~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~~~~~~~~~~~ 405 (411)
+.+-+.-.||||++..|+..|.++||||..+.+.|...|+.+ +-.+.+. .+++.+ +++.+++
T Consensus 455 ~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a--~~~i~vd----~~~~~~-~l~~l~~ 516 (529)
T 1ygy_A 455 INLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGA--TILLRLD----QDVPDD-VRTAIAA 516 (529)
T ss_dssp EEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCE--EEEEEES----SCCCHH-HHHHHHH
T ss_pred cEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEE--EEEEEEC----CCCCHH-HHHHHhc
Confidence 456677889999999999999999999999999976677777 4433333 346666 6777775
No 55
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.54 E-value=0.3 Score=48.55 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=44.4
Q ss_pred ceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEc
Q 015208 108 DVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTD 158 (411)
Q Consensus 108 ~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~ 158 (411)
+...|.+.-.|+||.+..|+.+|+++|+||...+..+ .++.++-++.|..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 4567888999999999999999999999999999998 8898888887744
No 56
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=91.47 E-value=0.32 Score=41.49 Aligned_cols=99 Identities=14% Similarity=0.075 Sum_probs=62.5
Q ss_pred CceEEEEEe---CCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHHHHHHcCC
Q 015208 243 GHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRLWMELLQP 319 (411)
Q Consensus 243 ~~tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 319 (411)
+.+.|++.+ +|+||.++++..+|+++|++|. -|+ +-.... .|++... +.++++.+. +...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd--~I~--~s~~~I--sf~v~~~-------~~~~~il~~----l~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVD--MVA--TSEVGV--SLTIDND-------KNLPDIVRA----LSDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCS--CEE--CCSSEE--EEEESCC-------TTHHHHHHH----HTTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEE--EEE--ecCCEE--EEEECCh-------HHHHHHHHH----Hhcc
Confidence 567888885 5899999999999999999997 444 222222 3666421 122333222 3322
Q ss_pred ceEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEE
Q 015208 320 LRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 368 (411)
Q Consensus 320 ~~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~ 368 (411)
..+.+... -..+.++|. ++||+...+...|+ |+||.-..
T Consensus 80 ~~v~~~~~--------~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is 121 (157)
T 3mah_A 80 GDVTVDKD--------MVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS 121 (157)
T ss_dssp EEEEEEEE--------EEEEEEEC------CCHHHHHHHTTT--TSCCSEEE
T ss_pred CeEEEeCC--------eEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe
Confidence 22322211 126788886 68999999999999 89988776
No 57
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=91.27 E-value=0.42 Score=48.94 Aligned_cols=110 Identities=12% Similarity=0.116 Sum_probs=71.1
Q ss_pred CCceEEEEEe---CCchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCC-CcCC-CHHHHHHHHHHHHHHH
Q 015208 242 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG-KKIV-DPSKQNGLSSRLWMEL 316 (411)
Q Consensus 242 ~~~tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g-~~~~-~~~~~~~l~~~L~~~l 316 (411)
++.+.|+|.+ .++||++.+|..+|+++|++|. -|++ --..+ .|++.... .+.. ..+.++++. ..+
T Consensus 339 ~~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd--~I~s--se~si--s~~v~~~~~~~~~~~~~~l~~~~----~el 408 (510)
T 2cdq_A 339 RNVTMLDIASTRMLGQVGFLAKVFSIFEELGISVD--VVAT--SEVSI--SLTLDPSKLWSRELIQQELDHVV----EEL 408 (510)
T ss_dssp EEEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEE--EEEE--ETTEE--EEEECCGGGSSSCCCHHHHHHHH----HHH
T ss_pred CCeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEE--EEEe--CCCeE--EEEEechHhhhhhHHHHHHHHHH----HHh
Confidence 3678899997 6899999999999999999999 4442 12222 36665211 1100 012233332 333
Q ss_pred cCCceEEEeccCCCccccccceEEEEeC--CCCchHHHHHHHHHhCCeeEEEEEe
Q 015208 317 LQPLRVTVVSRGPDTELLVANPVELSGK--GRPLVFHDITLALKMLDICIFSAEI 369 (411)
Q Consensus 317 ~~~~~~~i~~~~~~~~~~~~~~~~v~~~--DRpGil~dvt~~l~~~gi~I~~~~~ 369 (411)
...-.+.+... -..+.++|. .+||+...+..+|++.||||.-..-
T Consensus 409 ~~~~~v~~~~~--------~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIsq 455 (510)
T 2cdq_A 409 EKIAVVNLLKG--------RAIISLIGNVQHSSLILERAFHVLYTKGVNVQMISQ 455 (510)
T ss_dssp TTTSEEEEEEE--------EEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEEE
T ss_pred CCCCeEEEeCC--------cEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEEe
Confidence 33223333211 126888888 8899999999999999999988763
No 58
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=90.77 E-value=6.1 Score=39.83 Aligned_cols=114 Identities=14% Similarity=0.197 Sum_probs=71.7
Q ss_pred ceEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHcccc
Q 015208 108 DVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 184 (411)
Q Consensus 108 ~~t~i~v~~---~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~ 184 (411)
+.+.|+|.+ .++||+++++..+|+++|+||......|.. .--.|.|...+ .++..+.|.+.+-+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse---~~Is~~V~~~d--------~~~a~~~L~~~l~~-- 383 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE---TNISLVVSEED--------VDKALKALKREFGD-- 383 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT---CCEEEEEEGGG--------HHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC---CEEEEEEechH--------HHHHHHHHHHHHhh--
Confidence 567888886 678899999999999999999765543422 12356664321 23444444444411
Q ss_pred cccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeC---CchhHHHHH
Q 015208 185 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ---DHKGLLYDI 261 (411)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~---DRpGLL~~i 261 (411)
. .++ .+.. . .. -..|.++ ++..++.|.|. ++||.+..+
T Consensus 384 -----------~----------~~~---~~~~--------~--~~-~~~v~~~----~~~a~vsvVG~gm~~~~Gvaak~ 424 (473)
T 3c1m_A 384 -----------F----------GKK---SFLN--------N--NL-IRDVSVD----KDVCVISVVGAGMRGAKGIAGKI 424 (473)
T ss_dssp ----------------------------CTTS--------C--CC-EEEEEEE----EEEEEEEEECTTTTTCTTHHHHH
T ss_pred -----------h----------ccc---cccc--------c--cc-cceEEEe----CCcEEEEEEecCCCCChhHHHHH
Confidence 0 000 0000 0 00 0134443 35678999985 599999999
Q ss_pred HHHHHhCCeEEE
Q 015208 262 MRTLKDYNIQVS 273 (411)
Q Consensus 262 ~~~l~~~g~~i~ 273 (411)
..+|.+.|+||.
T Consensus 425 f~aL~~~~InI~ 436 (473)
T 3c1m_A 425 FTAVSESGANIK 436 (473)
T ss_dssp HHHHHHHTCCCC
T ss_pred HHHHHHCCCCEE
Confidence 999999999995
No 59
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=90.69 E-value=1.1 Score=46.03 Aligned_cols=64 Identities=14% Similarity=0.136 Sum_probs=48.8
Q ss_pred CCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeC-CCCeEEEEEEEEcCCCcCCCHhHHHHHH
Q 015208 106 PSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT-PDGKVMDLFFVTDTRELLHTRKRKEDTY 173 (411)
Q Consensus 106 ~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~-~~~~~~d~F~V~~~~~~~~~~~~~~~l~ 173 (411)
...+..+.+.-+|+||.+.+++..|.++|+||.+.++... .++.++-++.+.++ ++++.+++|+
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~~~~~l~~l~ 515 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----VPDDVRTAIA 515 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----CCHHHHHHHH
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----CCHHHHHHHh
Confidence 3456778888999999999999999999999999999753 46777777777332 3455555553
No 60
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=90.38 E-value=1.4 Score=44.28 Aligned_cols=108 Identities=13% Similarity=0.203 Sum_probs=71.3
Q ss_pred cEEEEEEc---CCCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCc-cHHHHHHHHHhhCCCCCCcceee
Q 015208 20 PCVITVNC---PDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQT-RWGLLKKRLMGACPSCSSASVVL 95 (411)
Q Consensus 20 ~~~V~v~~---~Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~-~~~~l~~~L~~~l~~~~~~~~~~ 95 (411)
.+.|+|.+ ++.||+.+++.+.|+++|+||.-- ++ +. .-..|.|...+-. ....+.+.|.+.+.. ...
T Consensus 298 ~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i--~~-~~-~~is~~V~~~d~~~~~~~~~~el~~~~~~-~~v---- 368 (446)
T 3tvi_A 298 FTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM--PS-GV-DSVSLVIEDCKLDGKCDKIIEEIKKQCNP-DSI---- 368 (446)
T ss_dssp EEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB--CE-ET-TEEEEEEEHHHHTTTHHHHHHHHHHHSCC-SEE----
T ss_pred EEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE--ec-CC-CEEEEEEecchHHHHHHHHHHHHHHhcCC-CcE----
Confidence 45677775 689999999999999999998632 22 22 1245666643211 233444555554421 000
Q ss_pred eecccccCCCCCceEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEe
Q 015208 96 YYRAEMQAPKPSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKIST 144 (411)
Q Consensus 96 ~~~~~~~~~~~~~~t~i~v~~~---Dr~GLl~~i~~~L~~~glnI~~A~I~T 144 (411)
....+...|.|++. ..||+.+++..+|++.|+||....-.|
T Consensus 369 --------~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgt 412 (446)
T 3tvi_A 369 --------EIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGS 412 (446)
T ss_dssp --------EEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECS
T ss_pred --------EEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecC
Confidence 11236789999985 589999999999999999997544334
No 61
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.12 E-value=1.4 Score=41.41 Aligned_cols=53 Identities=17% Similarity=0.258 Sum_probs=39.6
Q ss_pred ceEEEEEeCCchhHHHHHHHHHHhCCeEEEEEEEEeeec-CceEEEEEEEecCCCc
Q 015208 244 HTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQADGKK 298 (411)
Q Consensus 244 ~tvi~v~~~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~-g~~~~d~F~v~~~g~~ 298 (411)
.|.|-+.-+|+||-|+++...|+.+|+|+. +|.+-.. +....=.||++.+|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLT--KIESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTEEEEEEEEESCT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCee--EEEeeEcCCCCcceEEEEEEecCC
Confidence 456666668999999999999999999998 5553223 3334556899977764
No 62
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=89.69 E-value=2.8 Score=40.27 Aligned_cols=44 Identities=18% Similarity=0.329 Sum_probs=33.3
Q ss_pred CchhHHHHHHHHHHhCCeEEEEEEEEeeecCce-EEEEEEEecCCCc
Q 015208 253 DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNC-EIDLFIMQADGKK 298 (411)
Q Consensus 253 DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~-~~d~F~v~~~g~~ 298 (411)
|+||-|+++...|+.+|+|+. +|.+-...+. ..=+||++.+|..
T Consensus 217 ~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~ 261 (329)
T 3luy_A 217 TGPGVLANLLDVFRDAGLNMT--SFISRPIKGRTGTYSFIVTLDAAP 261 (329)
T ss_dssp CSTTHHHHHHHHHHHTTCCEE--EEEEEEETTEEEEEEEEEEESSCT
T ss_pred CCCCHHHHHHHHHHHCCcceE--EEEeeECCCCCccEEEEEEEeCCc
Confidence 799999999999999999998 5554233333 4445788887764
No 63
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=89.52 E-value=2.1 Score=42.59 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=43.7
Q ss_pred CCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEE
Q 015208 105 KPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFV 156 (411)
Q Consensus 105 ~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V 156 (411)
...+...|.+.-.|.||.|..|..+|+++|+||....-.| .++.++-+.-|
T Consensus 339 ~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~y~~~d~ 389 (416)
T 3k5p_A 339 PRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT-DGEVGYLVMEA 389 (416)
T ss_dssp CCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCEEEEEEE
T ss_pred CCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC-CCceEEEEEEe
Confidence 3446789999999999999999999999999999888777 77877666655
No 64
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=87.56 E-value=1.4 Score=43.79 Aligned_cols=65 Identities=14% Similarity=0.119 Sum_probs=47.3
Q ss_pred CCcEEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCccHHHHHHHHHh
Q 015208 18 GDPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQTRWGLLKKRLMG 83 (411)
Q Consensus 18 ~~~~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~~~~~l~~~L~~ 83 (411)
.+..+|+++=+|.||.+.+|..+|+++|+||.+-...|.|.+..-+.-|.+- +...+.+.+.|++
T Consensus 341 ~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~~~-~~~~~~~~~~l~~ 405 (416)
T 3k5p_A 341 PTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEADGV-GEASDAVLQEIRE 405 (416)
T ss_dssp SSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEECCC-HHHHHHHHHHHHT
T ss_pred CCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEecCC-CCCcHHHHHHHHh
Confidence 3578999999999999999999999999999988877877655444444311 1223344455543
No 65
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=84.38 E-value=2.8 Score=39.11 Aligned_cols=52 Identities=27% Similarity=0.392 Sum_probs=38.2
Q ss_pred CCceEEEEEe---CCchhHHHHHHHHHHhCCeEEEEEEEEeeec-CceEEEEEEEecC
Q 015208 242 PGHTLVQIVC---QDHKGLLYDIMRTLKDYNIQVSYGRFSRRQR-GNCEIDLFIMQAD 295 (411)
Q Consensus 242 ~~~tvi~v~~---~DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~-g~~~~d~F~v~~~ 295 (411)
...|.|-+.. +|+||-|+++...|+.+|+|+. +|.+-.. +....=.||++.+
T Consensus 184 ~~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 184 QNATSLMFLITPMHDKPGLLASVLNTFALFNINLS--WIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SSCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTCEEEEEEES
T ss_pred CCeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCee--EEEEeecCCCCccEEEEEEEe
Confidence 3456666666 8999999999999999999998 5553222 3334456899866
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=83.63 E-value=2.7 Score=40.17 Aligned_cols=55 Identities=11% Similarity=0.124 Sum_probs=38.7
Q ss_pred CceEEEEEEec-CcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCc
Q 015208 107 SDVFLLKLSCY-DRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTREL 162 (411)
Q Consensus 107 ~~~t~i~v~~~-Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~ 162 (411)
.+.|.|.+..+ |+||-|+++.+.|+.+|+|...-.-.-..++...-.|||. -+|.
T Consensus 199 ~~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD-~eg~ 254 (313)
T 3mwb_A 199 ADKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSID-ADGH 254 (313)
T ss_dssp SEEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEE-EESC
T ss_pred CCeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEE-EeCC
Confidence 45677777775 9999999999999999999965554433333223467774 3344
No 67
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=83.30 E-value=2.8 Score=35.44 Aligned_cols=102 Identities=13% Similarity=0.087 Sum_probs=64.1
Q ss_pred CcEEEEEEc---CCCCChHHHHHHHHHhCCCeEEEEEEEEcCcEEEEEEEEEcCCCccHHHHHHHHHhhCCCCCCcceee
Q 015208 19 DPCVITVNC---PDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVL 95 (411)
Q Consensus 19 ~~~~V~v~~---~Dr~Gl~~~i~~~L~~~glnI~~a~i~tdg~~~~d~f~V~~~~g~~~~~l~~~L~~~l~~~~~~~~~~ 95 (411)
+...|+|.+ ++.||..+++.+.|+++|+||.-- ++... --.|.|.+.. ..+.+.+.|.+ ....
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I--~~s~~--~Isf~v~~~~--~~~~il~~l~~----~~~v---- 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMV--ATSEV--GVSLTIDNDK--NLPDIVRALSD----IGDV---- 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCE--ECCSS--EEEEEESCCT--THHHHHHHHTT----TEEE----
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEE--EecCC--EEEEEECChH--HHHHHHHHHhc----cCeE----
Confidence 567788874 578899999999999999998532 22221 2456665432 34444333332 0000
Q ss_pred eecccccCCCCCceEEEEEEec---CcccHHHHHHHHHHhCCceEEEEEEEe
Q 015208 96 YYRAEMQAPKPSDVFLLKLSCY---DRKGLLYDVTAVLCELELTIEKVKIST 144 (411)
Q Consensus 96 ~~~~~~~~~~~~~~t~i~v~~~---Dr~GLl~~i~~~L~~~glnI~~A~I~T 144 (411)
....+...|.+++. +.||..+++..+|+ |+||....-.+
T Consensus 83 --------~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~isqg~ 124 (157)
T 3mah_A 83 --------TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMISYGG 124 (157)
T ss_dssp --------EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEEECS
T ss_pred --------EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEeeCC
Confidence 11235678888874 68999999999999 99997544324
No 68
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=83.02 E-value=19 Score=36.54 Aligned_cols=107 Identities=14% Similarity=0.238 Sum_probs=66.8
Q ss_pred ceEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcCCCcCCCHhHHHHHHHHHHHHHcccc
Q 015208 108 DVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTILGNAM 184 (411)
Q Consensus 108 ~~t~i~v~~---~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~~~~~~~~~~~~~l~~~L~~~L~~~~ 184 (411)
+.+.|+|.+ .+++|++++|...|+++|+||... .|... --.|.|...+....+. +++.|.+.+..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~sse~---sis~~v~~~~~~~~~~-----~~~~l~~~~~e-- 407 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATSEV---SISLTLDPSKLWSREL-----IQQELDHVVEE-- 407 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEETT---EEEEEECCGGGSSSCC-----CHHHHHHHHHH--
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeCCC---eEEEEEechHhhhhhH-----HHHHHHHHHHH--
Confidence 566788886 678999999999999999999755 34222 1346663322110000 11112221110
Q ss_pred cccccccccceeeeccCcCCCChhHHHhhhccCCCCCCCCCCCCCCCcEEEEecCCCCCceEEEEEeC--CchhHHHHHH
Q 015208 185 ISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSLSPGHTLVQIVCQ--DHKGLLYDIM 262 (411)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~rl~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~~tvi~v~~~--DRpGLL~~i~ 262 (411)
+.+ -..|.++ ++..+|.+.|. ..||+...+.
T Consensus 408 -------------------------l~~------------------~~~v~~~----~~~a~VsiVG~m~~~~Gvaa~~f 440 (510)
T 2cdq_A 408 -------------------------LEK------------------IAVVNLL----KGRAIISLIGNVQHSSLILERAF 440 (510)
T ss_dssp -------------------------HTT------------------TSEEEEE----EEEEEEEEEECGGGHHHHHHHHH
T ss_pred -------------------------hCC------------------CCeEEEe----CCcEEEEEEEECCCChhHHHHHH
Confidence 000 0124443 24578888887 8899999999
Q ss_pred HHHHhCCeEEE
Q 015208 263 RTLKDYNIQVS 273 (411)
Q Consensus 263 ~~l~~~g~~i~ 273 (411)
.+|.+.|+||.
T Consensus 441 ~aL~~~~InI~ 451 (510)
T 2cdq_A 441 HVLYTKGVNVQ 451 (510)
T ss_dssp HHHHHHTCCCS
T ss_pred HHHHHCCCCEE
Confidence 99999999998
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=80.77 E-value=1.2 Score=44.63 Aligned_cols=37 Identities=30% Similarity=0.162 Sum_probs=31.7
Q ss_pred cccceEEEEeCCCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 334 LVANPVELSGKGRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 334 ~~~~~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
...|.+.+...|+||++.+|+.+|.++||||.++--.
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~ 393 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQK 393 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEeec
Confidence 3567888999999999999999999999999987644
No 70
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=79.43 E-value=1 Score=44.72 Aligned_cols=64 Identities=11% Similarity=-0.079 Sum_probs=44.8
Q ss_pred eEEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCChh--hHHHHHHHH
Q 015208 338 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRN--KIEEGVWKL 406 (411)
Q Consensus 338 ~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~~~--~~~~~~~~~ 406 (411)
++-+.-.|+||-|+++-..|+.+|||+.++++. ..++..| -|.|||.-. ..-+.+ .+++.|++.
T Consensus 36 SLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESR--Psk~~~~-eY~FfVD~e--h~~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 36 SLIFSLKEEVGALAKVLRLFEENDINLTHIESR--PSRLNKD-EYEFFTYLD--KRTKPVLGSIIKSLRND 101 (429)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEE--ECSSCTT-EEEEEECBC--GGGHHHHHHHHHHHHHT
T ss_pred EEEEEeCCCccHHHHHHHHHHHcCCceEEEEee--ecCCCCc-cEEEEEEEe--eCCCHHHHHHHHHHHhh
Confidence 455555789999999999999999999999997 4444445 566999754 222222 245666554
No 71
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=65.82 E-value=6 Score=39.63 Aligned_cols=36 Identities=28% Similarity=0.619 Sum_probs=30.3
Q ss_pred CceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEE
Q 015208 107 SDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKI 142 (411)
Q Consensus 107 ~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I 142 (411)
...+-+.+...|+||.|++|+++|.++|++|.+..-
T Consensus 357 ~~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q 392 (444)
T 3mtj_A 357 RTAYYLRLRAFDRPGVLADITRILADSSISIDAMVQ 392 (444)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ceeeEEEEEecCcccHHHHHHHHHHhcCCceeEEee
Confidence 356778888999999999999999999999976544
No 72
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=60.12 E-value=4.6 Score=40.50 Aligned_cols=107 Identities=21% Similarity=0.172 Sum_probs=67.6
Q ss_pred CCceEEEEEeC---CchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCC-cCCCHHHHHHHHHHHHHHHc
Q 015208 242 PGHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGK-KIVDPSKQNGLSSRLWMELL 317 (411)
Q Consensus 242 ~~~tvi~v~~~---DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~-~~~~~~~~~~l~~~L~~~l~ 317 (411)
++.+.|++.+. +.||++.+|..+|.++|++|. -|++ -...+ .|.+..... .-.....++++...|.. +.
T Consensus 306 ~~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd--~i~s--s~~si--s~~v~~~~~~~~~~~~~~~~~~~el~~-~~ 378 (449)
T 2j0w_A 306 RNQTLLTLHSLNMLHSRGFLAEVFGILARHNISVD--LITT--SEVSV--ALTLDTTGSTSTGDTLLTQSLLMELSA-LC 378 (449)
T ss_dssp EEEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCS--EEEE--ETTEE--EEEECCCCCSSTTCCSSCHHHHHHHHH-HS
T ss_pred CCEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEE--EEEe--CCCeE--EEEEeccccchhhHHHHHHHHHHHhcc-CC
Confidence 36688888874 789999999999999999998 4442 12222 367753211 10011244556666543 22
Q ss_pred CCceEEEeccCCCccccccceEEEEeC---CCCchHHHHHHHHHhCCeeEEEEE
Q 015208 318 QPLRVTVVSRGPDTELLVANPVELSGK---GRPLVFHDITLALKMLDICIFSAE 368 (411)
Q Consensus 318 ~~~~~~i~~~~~~~~~~~~~~~~v~~~---DRpGil~dvt~~l~~~gi~I~~~~ 368 (411)
. +.+. .+ -..+.++|. .+||+...+..+|++ +||.-..
T Consensus 379 -~--v~~~-~~-------~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIs 419 (449)
T 2j0w_A 379 -R--VEVE-EG-------LALVALIGNDLSKACGVGKEVFGVLEP--FNIRMIC 419 (449)
T ss_dssp -C--EEEE-EE-------EEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEE
T ss_pred -e--EEEe-CC-------eEEEEEECCCccccccHHHHHHHHHhC--CCeEEEE
Confidence 2 3221 11 126888998 689999999999976 7765554
No 73
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=59.71 E-value=17 Score=35.95 Aligned_cols=54 Identities=17% Similarity=0.149 Sum_probs=39.1
Q ss_pred CCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEEEcC
Q 015208 106 PSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDT 159 (411)
Q Consensus 106 ~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V~~~ 159 (411)
....|.|.+..+|+||-|+++.+.|+.+|+|+..-.-.-..++...-.|+|.-.
T Consensus 31 g~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e 84 (429)
T 1phz_A 31 QNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD 84 (429)
T ss_dssp SSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC
T ss_pred CCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe
Confidence 345677777789999999999999999999996554443333333456888333
No 74
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=45.00 E-value=47 Score=26.32 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=43.9
Q ss_pred CcEEEEEEcCCCCChHHHHHHHHHhC---CCeEEEEEEEEcCcEEEEEEEEEcCCCccHHHHHH
Q 015208 19 DPCVITVNCPDKTGLGCDLCRIILFF---GLSIVRGDVSTDGKWCYIVFWVIGDSQTRWGLLKK 79 (411)
Q Consensus 19 ~~~~V~v~~~Dr~Gl~~~i~~~L~~~---glnI~~a~i~tdg~~~~d~f~V~~~~g~~~~~l~~ 79 (411)
..+.+.|.+++.+++...|..++..+ ++.+ ..+-|+.|.+..-.+.|.-. +.+++.+
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~Ss~GkY~Svtv~v~v~---S~eQv~a 94 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPSSKGNYHSVSITINAT---HIEQVET 94 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEESSCSSEEEEEEEECCS---SHHHHHH
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCCCCCeEEEEEEEEEEC---CHHHHHH
Confidence 35899999999999999999999998 8887 55777799877666666643 3345533
No 75
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=41.64 E-value=1.3e+02 Score=23.74 Aligned_cols=62 Identities=11% Similarity=0.098 Sum_probs=43.4
Q ss_pred CceEEEEEeCCchhHHHHHHHHHHhC---CeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHH
Q 015208 243 GHTLVQIVCQDHKGLLYDIMRTLKDY---NIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRL 312 (411)
Q Consensus 243 ~~tvi~v~~~DRpGLL~~i~~~l~~~---g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L 312 (411)
-.+.+.|.|.+.+++...|..++..+ +..+ ..+-+ ..|.-.. +-++. .+++++++..|-++|
T Consensus 35 c~y~~KvIG~a~~~~~~~V~~vv~~~~p~d~~~-~~r~S--s~GkY~S--vtv~v---~v~S~eQv~aiY~~L 99 (109)
T 1rwu_A 35 TPFTYKVMGQALPELVDQVVEVVQRHAPGDYTP-TVKPS--SKGNYHS--VSITI---NATHIEQVETLYEEL 99 (109)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHHSSSCCCE-EEEES--SCSSEEE--EEEEE---CCSSHHHHHHHHHHH
T ss_pred CCceEEEEEECcHHHHHHHHHHHHHhCCCCCCc-eecCC--CCCeEEE--EEEEE---EECCHHHHHHHHHHH
Confidence 35789999999999999999999988 6776 44655 3454333 33332 256677777776665
No 76
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=41.52 E-value=45 Score=27.42 Aligned_cols=34 Identities=18% Similarity=0.333 Sum_probs=28.8
Q ss_pred CceEEEEEeC---CchhHHHHHHHHHHhCCeEEEEEEEE
Q 015208 243 GHTLVQIVCQ---DHKGLLYDIMRTLKDYNIQVSYGRFS 278 (411)
Q Consensus 243 ~~tvi~v~~~---DRpGLL~~i~~~l~~~g~~i~~a~i~ 278 (411)
.+-.|+|.++ |-.|+++.++..|++.|+.|. -|+
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif--~iS 97 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIF--VVS 97 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCE--EEE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeE--EEE
Confidence 5567777765 889999999999999999998 566
No 77
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=37.32 E-value=44 Score=25.97 Aligned_cols=46 Identities=15% Similarity=-0.000 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 348 LVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 348 Gil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
.=+.++.+.|.+.|+.+..--..++ .|. .+....||+.||+|..+.
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~-~~~-~~~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRF-EGL-IEEHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEES-TTS-TTCEEEEEEECTTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCccccc-CCC-CCceEEEEEECCCCCEEE
Confidence 4477888899999999876554421 121 112446999999998764
No 78
>2qsw_A Methionine import ATP-binding protein METN 2; ABC transporter, structural genomics, APC87322.1, PSI-2, protein structure initiative; 1.50A {Enterococcus faecalis} SCOP: d.58.18.13
Probab=36.22 E-value=1.2e+02 Score=22.89 Aligned_cols=40 Identities=13% Similarity=0.247 Sum_probs=30.3
Q ss_pred hhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCC
Q 015208 255 KGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGK 297 (411)
Q Consensus 255 pGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~ 297 (411)
.-+++++++.+ +..+||.+|.|. ..++.....+++...|.
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~--~i~~~~~G~L~v~l~G~ 76 (100)
T 2qsw_A 37 LPIISHIVQEY-QVEVSIIQGNIQ--QTKQGAVGSLYIQLLGE 76 (100)
T ss_dssp SCHHHHHHHHH-TCEEEEEEEEEE--EETTEEEEEEEEEEESC
T ss_pred chHHHHHHHHh-CCCEEEEEeece--EcCCeeEEEEEEEEECC
Confidence 45777777776 577899999998 67777777888875453
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=35.23 E-value=24 Score=29.08 Aligned_cols=26 Identities=15% Similarity=0.077 Sum_probs=24.4
Q ss_pred CCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 345 GRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 345 DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
|-.|++..++..|++.||+|+-+.+-
T Consensus 74 ~~vGilA~is~pLA~agIsif~iSty 99 (134)
T 1zhv_A 74 DETGIVLSVISPLSTNGIGIFVVSTF 99 (134)
T ss_dssp SSCCHHHHHHHHHHTTTCCCEEEECS
T ss_pred cHHHHHHHHHHHHHhCCCCeEEEEec
Confidence 88899999999999999999998875
No 80
>3ced_A Methionine import ATP-binding protein METN 2; ABC transporter, NIL domain, structur genomics, PSI-2, protein structure initiative; 2.15A {Staphylococcus aureus subsp} SCOP: d.58.18.13
Probab=35.08 E-value=1.5e+02 Score=22.55 Aligned_cols=39 Identities=8% Similarity=0.209 Sum_probs=30.2
Q ss_pred hhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCC
Q 015208 255 KGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADG 296 (411)
Q Consensus 255 pGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g 296 (411)
.-+++++++.+ +..+||.+|.|. ..++.....+++...|
T Consensus 34 ~PvIs~l~~~~-~v~vnIL~g~I~--~i~~~~~G~L~v~l~G 72 (98)
T 3ced_A 34 EPIVSSLSTAY-DIKINILEANIK--NTKNGTVGFLVLHIPY 72 (98)
T ss_dssp HHHHHHHHHHH-TCCCEEEEEEEE--EETTEEEEEEEEEESC
T ss_pred chHHHHHHHHH-CCcEEEEEEEeE--EeCCEeEEEEEEEEeC
Confidence 45677777766 578999999998 6777777788887555
No 81
>3dhx_A Methionine import ATP-binding protein METN; methionine uptake, regulation, amino-acid transport, ATP-BIN hydrolase, inner membrane, membrane; 2.10A {Escherichia coli} SCOP: d.58.18.13
Probab=31.20 E-value=1.8e+02 Score=22.36 Aligned_cols=52 Identities=15% Similarity=0.306 Sum_probs=34.1
Q ss_pred CchhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCCcCCCHHHHHHHHHHH
Q 015208 253 DHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIVDPSKQNGLSSRL 312 (411)
Q Consensus 253 DRpGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~~~~~~~~~~~l~~~L 312 (411)
+.| +++++++.+ +..+||..|.|. ..++.....+++...|. ++..++..+.|
T Consensus 34 ~~P-iIs~l~~~~-~v~vnIL~g~I~--~i~~~~~G~L~v~l~G~----~~~~~~ai~~L 85 (106)
T 3dhx_A 34 DAP-LLSETARRF-NVNNNIISAQMD--YAGGVKFGIMLTEMHGT----QQDTQAAIAWL 85 (106)
T ss_dssp TCC-HHHHHHHHS-CCEEEEEEEEEE--EETTEEEEEEEEEEESC----HHHHHHHHHHH
T ss_pred Chh-HHHHHHHHH-CCCEEEEEEEeE--EECCeeEEEEEEEEeCC----HHHHHHHHHHH
Confidence 444 666666655 355899999998 67888888888875553 23444444444
No 82
>2qrr_A Methionine import ATP-binding protein METN; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 1.71A {Vibrio parahaemolyticus} SCOP: d.58.18.13
Probab=30.49 E-value=1.3e+02 Score=22.93 Aligned_cols=40 Identities=13% Similarity=0.311 Sum_probs=28.7
Q ss_pred hhHHHHHHHHHHhCCeEEEEEEEEeeecCceEEEEEEEecCCC
Q 015208 255 KGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGK 297 (411)
Q Consensus 255 pGLL~~i~~~l~~~g~~i~~a~i~~~t~g~~~~d~F~v~~~g~ 297 (411)
.-+++++++.+ +..+||.+|.|. ..++.....+++...|.
T Consensus 37 ~pvis~l~~~~-~v~vnIl~g~i~--~i~~~~~G~L~v~l~G~ 76 (101)
T 2qrr_A 37 APLMSQISRKY-NIDVSILSSDLD--YAGGVKFGMMVAELFGN 76 (101)
T ss_dssp SCHHHHHHHHS-CCEEEEEEEEEE--EETTEEEEEEEEEEESC
T ss_pred chHHHHHHHHh-CCCEEEEEeeee--EcCCeeEEEEEEEEeCC
Confidence 34667766655 466799999998 67777777888875453
No 83
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=29.56 E-value=60 Score=26.15 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 350 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 350 l~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
+.++.+.|.+.|+.+..--.. ...++ .||+.||+|..+.
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~--~~~G~-----~~~~~DPdG~~ie 114 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSK--VPTGR-----NMTVRHSDGSVIE 114 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEE--ETTEE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCEEecCCcc--CCCce-----EEEEECCCCCEEE
Confidence 778888999999998765444 22233 3899999999765
No 84
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=29.12 E-value=35 Score=28.10 Aligned_cols=28 Identities=7% Similarity=-0.249 Sum_probs=24.6
Q ss_pred eCCCCchHHHHHHHHHhCCeeEEEEEec
Q 015208 343 GKGRPLVFHDITLALKMLDICIFSAEIG 370 (411)
Q Consensus 343 ~~DRpGil~dvt~~l~~~gi~I~~~~~~ 370 (411)
+-|=.|++..|+..|++.||+|+-+.+-
T Consensus 81 ~l~~vGi~a~is~~LA~agIsif~iSty 108 (133)
T 1zvp_A 81 SLEAVGLTAAFATKLAEHGISANVIAGY 108 (133)
T ss_dssp --CCSCHHHHHHHHHHHTTCCCEEEECS
T ss_pred CccHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 4588999999999999999999998875
No 85
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=27.85 E-value=2.1e+02 Score=22.02 Aligned_cols=49 Identities=20% Similarity=0.124 Sum_probs=35.7
Q ss_pred CceEEEEEEecCcccHHHHHHHHHHhCCce-EEEEEEEeCCCCeEEEEEEEEcCCCcC
Q 015208 107 SDVFLLKLSCYDRKGLLYDVTAVLCELELT-IEKVKISTTPDGKVMDLFFVTDTRELL 163 (411)
Q Consensus 107 ~~~t~i~v~~~Dr~GLl~~i~~~L~~~gln-I~~A~I~T~~~~~~~d~F~V~~~~~~~ 163 (411)
..++.+.+...| +....+.|.++|+. +...-... ..|.. |++.|++|..
T Consensus 65 ~~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~-~~G~~---~~~~DPdGn~ 114 (128)
T 3g12_A 65 IPSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDM-PDGKK---AIVLDPDGHS 114 (128)
T ss_dssp CCSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEEC-C-CEE---EEEECTTCCE
T ss_pred CCceEEEEEeCC----HHHHHHHHHHCCCceeccCceeC-CCccE---EEEECCCCCE
Confidence 345677788888 88888999999999 76543333 44543 8999999863
No 86
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=25.43 E-value=79 Score=24.86 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=28.0
Q ss_pred HHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 350 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 350 l~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
+.++...|.+.|+.+...-.. ..+++ .+|+.||+|..+.
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~--~~~g~-----~~~~~DPdG~~ie 147 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVT--RPTGR-----GVYFYDPDGFMIE 147 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--C-CCE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccCcee--cCCcc-----EEEEECCCCCEEE
Confidence 777888899999998765444 22222 4899999998654
No 87
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=24.05 E-value=1e+02 Score=24.67 Aligned_cols=39 Identities=15% Similarity=0.052 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 350 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 350 l~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
+.+....|.+.|+.+..--.. ..+++ .+|+.||+|.-+.
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~--~~~g~-----~~~f~DPdGn~ie 147 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTD--MGPVV-----TAILDDTCGNLIQ 147 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--CSSCE-----EEEEECSSSCEEE
T ss_pred hhhhhhHHhcCCcEEeeCCEE--cCCeE-----EEEEECCCCCEEE
Confidence 677888899999998765555 33333 3789999998654
No 88
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=24.01 E-value=2e+02 Score=29.06 Aligned_cols=132 Identities=18% Similarity=0.192 Sum_probs=70.7
Q ss_pred EEEEEEcCCCCChHHHHHHHHHhCCCeEEEEEEEE-cCcEEEEEEEEEcCCC--ccHHHHHHHHHhhCCCCCCcc----e
Q 015208 21 CVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVST-DGKWCYIVFWVIGDSQ--TRWGLLKKRLMGACPSCSSAS----V 93 (411)
Q Consensus 21 ~~V~v~~~Dr~Gl~~~i~~~L~~~glnI~~a~i~t-dg~~~~d~f~V~~~~g--~~~~~l~~~L~~~l~~~~~~~----~ 93 (411)
..+.|.-+||||-|.+++.+|. +-||.+-.=.. +.. ...++....-.+ ...+.+.+.|++.--...+.. .
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~ 415 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAK-NACIFVGVRLSRGLEERKEILQMLNDGGYSVVDLSDDEMA 415 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSS-BCEEEEEEECSSTHHHHHHHHHHHTSSSCEEETTSSCHHH
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCC-eEEEEEEEEeCCcHHHHHHHHHHHHhCCCCeEECCCCHHH
Confidence 5677888999999999999887 78888654422 222 223333333222 223334444443210000110 0
Q ss_pred eeeecccccC--CCCCceEEEEEEecCcccHHHHHHHHHHhCCceEEEEEEEeC--CCCeEEEEEEE
Q 015208 94 VLYYRAEMQA--PKPSDVFLLKLSCYDRKGLLYDVTAVLCELELTIEKVKISTT--PDGKVMDLFFV 156 (411)
Q Consensus 94 ~~~~~~~~~~--~~~~~~t~i~v~~~Dr~GLl~~i~~~L~~~glnI~~A~I~T~--~~~~~~d~F~V 156 (411)
+...+.-+.. ....+-....+.=|.|||-|.+....|.. ++||.--+-... .-|+++--|.|
T Consensus 416 ~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~~~~~~~~~~~ 481 (514)
T 1tdj_A 416 KLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTDYGRVLAAFEL 481 (514)
T ss_dssp HHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTCSSCEEEEEC-
T ss_pred HHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCCcccEEEEEEc
Confidence 1001111111 11234566777789999999999998875 577743333221 12677777766
No 89
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=23.19 E-value=62 Score=26.36 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 350 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 350 l~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
|.++.+.|.+.|+.+..-... ..|++ .||+.||+|..+.
T Consensus 90 ld~~~~~l~~~G~~~~~~~~~--~~g~~-----~~~~~DPdG~~ie 128 (160)
T 3r4q_A 90 VDEWKTRFEALEIPVEHYHRW--PNGSY-----SVYIRDPAGNSVE 128 (160)
T ss_dssp HHHHHHHHHTTTCCCCEEEEC--TTSCE-----EEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCEEeccccc--cCCcE-----EEEEECCCCCEEE
Confidence 677788889999998743322 23333 4899999998664
No 90
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=21.80 E-value=72 Score=25.39 Aligned_cols=44 Identities=14% Similarity=0.225 Sum_probs=29.6
Q ss_pred hHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 349 VFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 349 il~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
=+.++...|.+.|+.+...... ..+... ....||+.||+|..+.
T Consensus 100 dl~~~~~~l~~~G~~~~~~p~~--~~~~~g-~~~~~~~~DPdGn~iE 143 (147)
T 3zw5_A 100 PLEEMIQHLKACDVPIEEGPVP--RTGAKG-PIMSIYFRDPDRNLIE 143 (147)
T ss_dssp CHHHHHHHHHHTTCCCCEEEEE--EEETTE-EEEEEEEECTTCCEEE
T ss_pred CHHHHHHHHHHcCCceeeCccc--ccCCCC-ceEEEEEECCCCCEEE
Confidence 3777888899999998765444 222221 1345899999998653
No 91
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=21.21 E-value=1.2e+02 Score=23.73 Aligned_cols=51 Identities=6% Similarity=0.019 Sum_probs=31.5
Q ss_pred eEEEEeCCCCchHHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCCC
Q 015208 338 PVELSGKGRPLVFHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVP 395 (411)
Q Consensus 338 ~~~v~~~DRpGil~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~~ 395 (411)
.+.+...|+ .=+.++...|.+.|+.+..--... ..| ...||+.||+|..+.
T Consensus 78 ~~~f~v~~~-~dv~~~~~~l~~~G~~~~~~~~~~-~~g-----~~~~~~~DPdG~~ie 128 (141)
T 2rbb_A 78 LLNFDVDTK-EAVDKLVPVAIAAGATLIKAPYET-YYH-----WYQAVLLDPERNVFR 128 (141)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEEEEEEEC-TTS-----EEEEEEECTTSCEEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHcCCeEecCcccc-CCc-----cEEEEEECCCCCEEE
Confidence 344444432 236677788899999876543331 112 345899999998664
No 92
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=21.12 E-value=2e+02 Score=23.41 Aligned_cols=45 Identities=22% Similarity=0.266 Sum_probs=32.3
Q ss_pred CCceEEEEEEe---cCcccHHHHHHHHHHhCCceEEEEEEEeCCCCeEEEEEEE
Q 015208 106 PSDVFLLKLSC---YDRKGLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFV 156 (411)
Q Consensus 106 ~~~~t~i~v~~---~Dr~GLl~~i~~~L~~~glnI~~A~I~T~~~~~~~d~F~V 156 (411)
....-.|++.+ -|-.|+++.+++.|++.|+.|. -|+|... |-..|
T Consensus 68 ~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif--~iSty~t----DhIlV 115 (133)
T 1zvp_A 68 SALFSLITLTVHSSLEAVGLTAAFATKLAEHGISAN--VIAGYYH----DHIFV 115 (133)
T ss_dssp CSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCE--EEECSSC----EEEEE
T ss_pred CCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcE--EEEeccc----cEEEE
Confidence 34556666655 6889999999999999999995 4555332 55566
No 93
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=20.50 E-value=1e+02 Score=23.13 Aligned_cols=39 Identities=13% Similarity=0.134 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCCeeEEEEEecccccCcceeeEEEEEEEcCCCCCC
Q 015208 350 FHDITLALKMLDICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSV 394 (411)
Q Consensus 350 l~dvt~~l~~~gi~I~~~~~~~~~~g~~~~~~~~f~v~~~~g~~~ 394 (411)
+.++...|.+.|+.+...-.. ...+ ...+|+.||+|..+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~--~~~g----~~~~~~~DPdG~~i 123 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRM--TGDG----YYESVVLDPEGNRI 123 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE--CTTS----CEEEEEECTTSCEE
T ss_pred HHHHHHHHHHcCCeEecCccc--CCCC----cEEEEEECCCCCEE
Confidence 667788889999998765333 1111 23489999999754
Done!