Query 015211
Match_columns 411
No_of_seqs 274 out of 1651
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:38:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015211.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015211hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3psg_A Pepsinogen; hydrolase(a 100.0 9E-51 3.1E-55 402.2 23.2 267 90-405 45-322 (370)
2 2x0b_A Renin; hydrolase-hormon 100.0 5.1E-50 1.8E-54 397.9 21.2 268 91-407 51-333 (383)
3 3vla_A EDGP; extracellular, in 100.0 1.9E-49 6.5E-54 397.7 22.7 287 97-407 16-354 (413)
4 1dpj_A Proteinase A; proteinas 100.0 7E-49 2.4E-53 383.0 23.6 265 92-406 4-282 (329)
5 1tzs_A Cathepsin E; hydrolase, 100.0 1.3E-48 4.5E-53 384.4 23.6 268 89-406 11-291 (351)
6 4aa9_A Chymosin; hydrolase, as 100.0 6.5E-49 2.2E-53 381.7 21.0 267 92-407 2-278 (320)
7 3cms_A Chymosin B; hydrolase, 100.0 2.9E-48 1E-52 377.7 23.8 265 92-405 5-279 (323)
8 1am5_A Pepsin, acid proteinase 100.0 2.6E-48 8.9E-53 378.2 23.0 264 92-405 3-276 (324)
9 1htr_B Gastricsin; aspartyl pr 100.0 7.5E-48 2.6E-52 375.7 24.3 265 92-406 4-281 (329)
10 2bju_A Plasmepsin II; aspartic 100.0 7E-48 2.4E-52 389.1 23.1 264 91-407 128-403 (453)
11 3k1w_A Renin; protease, altern 100.0 6.1E-48 2.1E-52 378.0 21.7 268 89-406 6-289 (341)
12 1j71_A Candidapepsin, aspartic 100.0 2.9E-47 9.9E-52 372.3 25.7 267 92-407 4-283 (334)
13 2qzx_A Candidapepsin-5; aspart 100.0 1.6E-47 5.6E-52 375.3 23.8 268 92-405 4-283 (342)
14 3c9x_A Trichoderma reesei aspa 100.0 8.4E-48 2.9E-52 375.4 20.9 262 97-406 11-283 (329)
15 2apr_A Rhizopuspepsin; hydrola 100.0 2.7E-47 9.2E-52 371.2 24.0 257 97-405 11-280 (325)
16 1mpp_A Pepsin; hydrolase(acid 100.0 2.5E-47 8.5E-52 376.7 23.2 270 91-406 8-310 (361)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 4E-47 1.4E-51 380.5 24.5 287 92-406 11-340 (403)
18 1miq_A Plasmepsin; aspartic pr 100.0 7.7E-47 2.6E-51 374.7 25.3 262 90-406 51-326 (375)
19 1oew_A Endothiapepsin; hydrola 100.0 1.5E-47 5.2E-52 373.5 19.9 259 98-405 12-281 (329)
20 1qdm_A Prophytepsin; aspartic 100.0 9.5E-47 3.2E-51 384.3 24.2 226 90-352 41-280 (478)
21 3fv3_A SAPP1P-secreted asparti 100.0 8.3E-46 2.8E-50 362.7 25.5 261 92-405 4-287 (339)
22 3pvk_A Candidapepsin-2; hydrol 100.0 1E-45 3.5E-50 362.4 24.3 265 92-404 4-282 (342)
23 1yg9_A Aspartic protease BLA G 100.0 7E-46 2.4E-50 361.9 21.5 265 92-405 8-285 (330)
24 3qvc_A Histo-aspartic protease 100.0 2.2E-45 7.4E-50 371.3 25.2 263 89-406 125-401 (451)
25 1ibq_A Aspergillopepsin; aspar 100.0 3.8E-45 1.3E-49 356.0 20.5 257 98-406 11-278 (325)
26 2ewy_A Beta-secretase 2; BACE2 100.0 8.9E-45 3E-49 361.1 22.6 272 94-406 6-308 (383)
27 2qp8_A Beta-secretase 1; BACE1 100.0 3E-44 1E-48 358.8 24.8 270 95-406 15-319 (395)
28 1izd_A Aspartic proteinase; su 100.0 1.1E-44 3.9E-49 352.3 20.4 254 99-405 13-277 (323)
29 1b5f_A Protein (cardosin A); h 100.0 1.9E-44 6.5E-49 336.0 20.3 224 90-351 2-236 (239)
30 1t6e_X Xylanase inhibitor; two 100.0 1.9E-44 6.5E-49 358.5 20.9 277 93-406 5-322 (381)
31 3lpj_A Beta-secretase 1; alzhe 100.0 5.9E-44 2E-48 362.9 24.7 272 95-407 68-373 (455)
32 3vf3_A Beta-secretase 1; struc 100.0 1.9E-43 6.5E-48 353.8 26.3 269 98-407 25-327 (402)
33 1bxo_A Protein (penicillopepsi 100.0 2E-44 6.8E-49 350.6 16.8 254 99-406 13-277 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 1.6E-43 5.6E-48 346.5 20.6 249 92-406 4-277 (340)
35 1lya_B Cathepsin D; lysosomal 100.0 5E-28 1.7E-32 225.3 17.8 176 220-407 3-191 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 1.1E-23 3.8E-28 167.4 9.3 94 91-211 3-96 (97)
37 1b5f_B Protein (cardosin A); h 96.9 0.00025 8.7E-09 54.1 1.4 36 371-407 3-38 (87)
38 2i1a_A DNA damage-inducible pr 91.2 0.28 9.6E-06 40.7 5.4 30 100-131 24-53 (148)
39 1fmb_A EIAV protease; hydrolas 86.0 0.79 2.7E-05 35.8 4.2 26 104-131 10-35 (104)
40 2hs1_A HIV-1 protease; ultra-h 85.9 0.82 2.8E-05 35.3 4.2 26 104-131 10-35 (99)
41 3ec0_A Protease; HIV-2, inhibi 82.7 1.3 4.4E-05 34.2 4.0 26 104-131 10-35 (99)
42 3liy_A Protease; hydrolase, hy 81.8 1.4 4.7E-05 34.8 3.9 27 105-131 13-42 (116)
43 2hah_A Protease, retropepsin; 78.0 2.1 7.2E-05 34.0 4.0 25 104-131 16-40 (116)
44 3sqf_A Protease; folded monome 72.6 4 0.00014 32.2 4.2 25 105-131 12-36 (114)
45 3s8i_A Protein DDI1 homolog 1; 66.1 5.2 0.00018 33.1 3.9 29 102-132 24-52 (148)
46 2i1a_A DNA damage-inducible pr 63.4 6.7 0.00023 32.0 4.1 34 305-346 25-58 (148)
47 3s8i_A Protein DDI1 homolog 1; 60.6 5.9 0.0002 32.8 3.2 34 306-347 24-57 (148)
48 3slz_A GAG-Pro-POL polyprotein 58.9 9.3 0.00032 30.9 4.0 26 104-131 24-49 (132)
49 2rsp_A RSV protease; hydrolase 57.7 8.8 0.0003 30.7 3.6 21 109-131 27-47 (124)
50 1bxo_A Protein (penicillopepsi 57.1 8.2 0.00028 36.0 4.0 42 293-343 4-45 (323)
51 1lya_A Cathepsin D; lysosomal 56.6 12 0.00039 28.4 4.1 32 305-342 13-44 (97)
52 1ibq_A Aspergillopepsin; aspar 55.2 9.7 0.00033 35.5 4.1 42 293-343 3-44 (325)
53 3ka2_A [L-Ala51;Gly51']HIV-1 p 55.1 11 0.00037 32.9 4.0 26 104-131 10-35 (203)
54 1izd_A Aspartic proteinase; su 53.2 11 0.00037 35.2 4.1 42 293-343 4-45 (323)
55 3c9x_A Trichoderma reesei aspa 41.5 30 0.001 32.1 5.2 44 293-343 3-47 (329)
56 1oew_A Endothiapepsin; hydrola 39.7 33 0.0011 31.8 5.2 43 293-342 3-46 (329)
57 2apr_A Rhizopuspepsin; hydrola 39.4 30 0.001 32.1 4.8 42 294-342 5-46 (325)
58 3ka2_A [L-Ala51;Gly51']HIV-1 p 36.5 32 0.0011 29.9 4.0 26 104-131 114-139 (203)
59 3aup_A SBG7S, BG, basic 7S glo 29.2 44 0.0015 32.0 4.2 42 294-342 11-52 (403)
60 3fv3_A SAPP1P-secreted asparti 27.1 36 0.0012 31.6 3.1 32 305-342 12-43 (339)
61 1b5f_A Protein (cardosin A); h 26.7 74 0.0025 27.9 5.0 32 305-342 13-44 (239)
62 1j71_A Candidapepsin, aspartic 25.6 32 0.0011 32.0 2.4 32 305-342 12-43 (334)
63 3vla_A EDGP; extracellular, in 24.8 55 0.0019 31.6 4.0 41 294-341 10-50 (413)
64 1wkr_A Polyporopepsin; hydrola 24.5 51 0.0017 30.6 3.6 39 294-341 4-42 (340)
65 2qzx_A Candidapepsin-5; aspart 24.0 46 0.0016 31.0 3.2 32 305-342 12-43 (342)
66 1t6e_X Xylanase inhibitor; two 23.7 57 0.002 30.9 3.9 26 305-341 14-39 (381)
67 3pvk_A Candidapepsin-2; hydrol 22.9 49 0.0017 30.7 3.1 32 305-342 12-43 (342)
68 3cms_A Chymosin B; hydrolase, 22.3 73 0.0025 29.3 4.2 41 294-342 5-45 (323)
69 1am5_A Pepsin, acid proteinase 21.6 83 0.0028 28.9 4.4 32 305-342 12-43 (324)
70 1dpj_A Proteinase A; proteinas 21.3 94 0.0032 28.6 4.8 41 294-342 4-44 (329)
71 1lya_B Cathepsin D; lysosomal 21.0 1.2E+02 0.0041 26.3 5.2 26 106-131 107-136 (241)
No 1
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=9e-51 Score=402.18 Aligned_cols=267 Identities=23% Similarity=0.355 Sum_probs=225.5
Q ss_pred CceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCC
Q 015211 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (411)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~ 169 (411)
...++|.|+.+.+||++|.||||||+|.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~--~C~~~~-------C~~~~~y~~~~SsT~~~~~--- 112 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV--YCSSLA-------CSDHNQFNPDDSSTFEATS--- 112 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGG-------GTTSCCBCGGGCTTCEEEE---
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC--CCCCcc-------cCCCCCCCCccCcCcEECC---
Confidence 4567899999999999999999999999999999999999995 443223 4467899999999999854
Q ss_pred CCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEec
Q 015211 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGL 249 (411)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGL 249 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+.++....+||||||
T Consensus 113 ---------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGL 167 (370)
T 3psg_A 113 ---------------QELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGL 167 (370)
T ss_dssp ---------------EEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred ---------------cEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceecc
Confidence 8999999997 5899999999999875 67899999999987765555678999999
Q ss_pred CCCCCC------hHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCe
Q 015211 250 GLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSS 319 (411)
Q Consensus 250 g~~~~s------~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~ 319 (411)
|++.++ +..+|++||+| +++||+||.++ .+|.|+||++|+.+ .+.+.|+|+... .+|+|.+++|+||++
T Consensus 168 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~-~~w~v~l~~i~v~g~ 246 (370)
T 3psg_A 168 AYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGE 246 (370)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSS
T ss_pred CCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc-ceeEEEEeEEEECCE
Confidence 998765 46679999999 69999999985 57999999999987 567788887754 799999999999998
Q ss_pred eec-cCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeC
Q 015211 320 CLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (411)
Q Consensus 320 ~~~-~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~ 398 (411)
.+. ...+.+||||||++++||+++|++|.+++ ++..... .+|.++|+....+|+|+|+| ||++++|++
T Consensus 247 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i----~a~~~~~------g~~~v~C~~~~~lP~i~f~~-~g~~~~l~~ 315 (370)
T 3psg_A 247 TIACSGGCQAIVDTGTSLLTGPTSAIANIQSDI----GASENSD------GEMVISCSSIDSLPDIVFTI-DGVQYPLSP 315 (370)
T ss_dssp EEECTTCEEEEECTTCCSEEEEHHHHHHHHHHT----TCEECTT------CCEECCGGGGGGCCCEEEEE-TTEEEEECH
T ss_pred EEecCCCceEEEcCCCCcEECCHHHHHHHHHHh----CCcccCC------CcEEEECCCcccCCcEEEEE-CCEEEEECH
Confidence 764 35789999999999999999988887655 3332211 24889998877899999999 799999999
Q ss_pred CeEEEEe
Q 015211 399 PVFVIYG 405 (411)
Q Consensus 399 ~~yi~~~ 405 (411)
++|+++.
T Consensus 316 ~~yi~~~ 322 (370)
T 3psg_A 316 SAYILQD 322 (370)
T ss_dssp HHHEEEC
T ss_pred HHhcccC
Confidence 9999983
No 2
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=5.1e-50 Score=397.91 Aligned_cols=268 Identities=22% Similarity=0.362 Sum_probs=225.8
Q ss_pred ceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCC
Q 015211 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (411)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 170 (411)
..+++.|+.+..||++|.||||||+|.|+|||||+++||+|. .|.... ..|..++.|||++|+||+..
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~--~C~~~~-----~~C~~~~~y~~~~SsT~~~~----- 118 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS--KCSRLY-----TACVYHKLFDASDSSSYKHN----- 118 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TSCTTS-----HHHHTSCCBCGGGCTTCEEE-----
T ss_pred ceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc--CCCCCc-----ccccCCCCCCCCCCCcEEEC-----
Confidence 358899999999999999999999999999999999999994 443210 11335689999999999985
Q ss_pred CCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecC
Q 015211 171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLG 250 (411)
Q Consensus 171 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg 250 (411)
+|.|.+.|++| +++|.+++|+|+|++. .++ +.|||+..+.|..+....+|||||||
T Consensus 119 -------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGIlGLg 174 (383)
T 2x0b_A 119 -------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGVVGMG 174 (383)
T ss_dssp -------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEEEECS
T ss_pred -------------CcEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceEeccC
Confidence 49999999997 5899999999999875 566 99999999877545445789999999
Q ss_pred CCCCCh------HHHHHhcCCC-cceeEEeecCC------CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEe
Q 015211 251 LGEISV------PSLLAKAGLI-RNSFSMCFDKD------DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCI 316 (411)
Q Consensus 251 ~~~~s~------~~~l~~~~~i-~~~FS~cL~~~------~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 316 (411)
++.+++ ..+|++||+| +++||+||.++ .+|.|+||++|+.+ .+.+.|+|+... .+|+|.|++|+|
T Consensus 175 ~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~-~~w~v~l~~i~v 253 (383)
T 2x0b_A 175 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGVSV 253 (383)
T ss_dssp CGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST-TSCEEEECEEEE
T ss_pred CCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC-ceEEEEEeEEEe
Confidence 988763 5679999999 69999999875 27999999999987 578889998765 899999999999
Q ss_pred CCeee-ccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEE
Q 015211 317 GSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 395 (411)
Q Consensus 317 gg~~~-~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~ 395 (411)
|++.+ ...++.+||||||+++++|+++|++|.++|.. .. ..+. |.++|.....+|+|+|+| +|+.|+
T Consensus 254 ~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a----~~-~~g~------~~v~C~~~~~~P~i~f~~-~g~~~~ 321 (383)
T 2x0b_A 254 GSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGA----KK-RLFD------YVVKCNEGPTLPDISFHL-GGKEYT 321 (383)
T ss_dssp SSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTC----EE-CSSC------EEEEGGGTTTCCCEEEEE-TTEEEE
T ss_pred CCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCC----cc-cCCc------EEEeccccccCceEEEEE-CCEEEE
Confidence 99874 34678999999999999999998888877643 22 2222 778998778899999999 799999
Q ss_pred EeCCeEEEEecc
Q 015211 396 VNNPVFVIYGTQ 407 (411)
Q Consensus 396 i~~~~yi~~~~~ 407 (411)
|++++|+++..+
T Consensus 322 l~~~~yi~~~~~ 333 (383)
T 2x0b_A 322 LTSADYVFQESY 333 (383)
T ss_dssp ECHHHHBCCCCC
T ss_pred ECHHHhEeeccC
Confidence 999999988653
No 3
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.9e-49 Score=397.72 Aligned_cols=287 Identities=22% Similarity=0.362 Sum_probs=224.2
Q ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 015211 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (411)
Q Consensus 97 ~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 176 (411)
+..+.+||++|.||||||+|.|++||||+++||+| ..| .+|+||+.++|.++.|....
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c--~~c--------------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDC--DQN--------------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEEC--SSS--------------------CCCTTCEECBTTSHHHHHTT
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhccc--CCC--------------------CCCCCcCccCCCcccccccc
Confidence 45567999999999999999999999999999999 333 25999999999999997532
Q ss_pred --CC---CC------CCCCCceeeeeC-CCCceeeeeEEEEEEEeecCCCCccc-ccccccEEEEeEeeccCCCCCCCCC
Q 015211 177 --SC---QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNALK-NSVQASVIIGCGMKQSGGYLDGVAP 243 (411)
Q Consensus 177 --~C---~~------~~~~c~~~~~Y~-~g~s~~~G~~~~D~v~l~~~~~~~~~-~~~~~~~~fG~~~~~~g~~~~~~~~ 243 (411)
.| .+ ..+.|.|.+.|+ +| +++.|++++|+|+|+..++...+ ...++++.|||+..+.+... ...+
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~ 151 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGV 151 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTC
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccc
Confidence 22 21 124699999994 74 68899999999999865432111 13567899999998742211 1367
Q ss_pred ceEEecCCCCCChHHHHHhcCCCcceeEEeecCC--CCceEEEccCCCCC----------ceEeeeeecCCC--------
Q 015211 244 DGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPAT----------QQSTSFLASNGK-------- 303 (411)
Q Consensus 244 dGIlGLg~~~~s~~~~l~~~~~i~~~FS~cL~~~--~~G~l~fG~~d~~~----------~~~~p~v~~~~~-------- 303 (411)
|||||||++.+|+++||+++++++++|||||.++ .+|.|+||+.+..+ ..++|++..+..
T Consensus 152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 9999999999999999999988899999999873 57999999987532 445666543321
Q ss_pred --ceeEEEeeeeeEeCCeeeccC----------cccEEEecCCcccccCHHHHHHHHHHHHHhccccc--ccccCCCccc
Q 015211 304 --YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI--TSFEGYPWKC 369 (411)
Q Consensus 304 --~~~y~v~l~~i~vgg~~~~~~----------~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~--~~~~~~~~~~ 369 (411)
..+|+|+|++|+||++.+... ...+||||||++|+||+++|++|+++|.+++.... .......++.
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~ 311 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGA 311 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSC
T ss_pred CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcc
Confidence 269999999999999987532 36799999999999999999999999998875211 1122345789
Q ss_pred eEeecCCCC----CCCCeEEEEeCC-CcEEEEeCCeEEEEecc
Q 015211 370 CYKSSSQRL----PKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQ 407 (411)
Q Consensus 370 Cy~~~~~~~----~~~P~i~f~f~g-g~~~~i~~~~yi~~~~~ 407 (411)
||.+++... ..+|+|+|+|+| ++.|+|++++|+++.++
T Consensus 312 C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~ 354 (413)
T 3vla_A 312 CFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND 354 (413)
T ss_dssp EEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET
T ss_pred eeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC
Confidence 999887531 378999999965 48999999999998543
No 4
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=7e-49 Score=382.98 Aligned_cols=265 Identities=25% Similarity=0.356 Sum_probs=223.5
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 170 (411)
.+++.|+.+..|+++|.||||||+|.|++||||+++||+|. |.. .. |..++.|||++|+|++..
T Consensus 4 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~---~~-------C~~~~~y~~~~SsT~~~~----- 68 (329)
T 1dpj_A 4 DVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGS---LA-------CFLHSKYDHEASSSYKAN----- 68 (329)
T ss_dssp EEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS---HH-------HHTSCCBCGGGCTTCEEE-----
T ss_pred ceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCC---cc-------cCCcCcCCcccCcCeEEC-----
Confidence 56788888999999999999999999999999999999995 544 22 224678999999999984
Q ss_pred CCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecC
Q 015211 171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLG 250 (411)
Q Consensus 171 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg 250 (411)
+|.|.+.|++| ++.|.+++|+|+|++. .++++.|||++.+.+..+.....|||||||
T Consensus 69 -------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~~~~~GilGLg 125 (329)
T 1dpj_A 69 -------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILGLG 125 (329)
T ss_dssp -------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEECS
T ss_pred -------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCccccccCCcceEEEeC
Confidence 49999999997 6899999999999875 678999999998776323334679999999
Q ss_pred CCCCCh------HHHHHhcCCC-cceeEEeecCC-----CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeC
Q 015211 251 LGEISV------PSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIG 317 (411)
Q Consensus 251 ~~~~s~------~~~l~~~~~i-~~~FS~cL~~~-----~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg 317 (411)
++.+++ ..+|++||+| +++||+||.+. .+|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||
T Consensus 126 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~ 204 (329)
T 1dpj_A 126 YDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK-AYWEVKFEGIGLG 204 (329)
T ss_dssp CGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB-TTBEEEEEEEEET
T ss_pred CchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC-ceEEEEeeeEEEC
Confidence 988764 4579999999 69999999764 36999999999877 567888887764 7999999999999
Q ss_pred CeeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEe
Q 015211 318 SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVN 397 (411)
Q Consensus 318 g~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~ 397 (411)
++.+......+||||||++++||+++|++|.+++.. ... ...||.++|.....+|+|+|+| +|++++|+
T Consensus 205 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~----~~~------~~g~~~~~C~~~~~~P~i~f~f-~g~~~~i~ 273 (329)
T 1dpj_A 205 DEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGA----KKG------WTGQYTLDCNTRDNLPDLIFNF-NGYNFTIG 273 (329)
T ss_dssp TEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTC----EEC------TTSSEEECGGGGGGCCCEEEEE-TTEEEEEC
T ss_pred CeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCC----ccC------CCCeEEEECCCCCcCCcEEEEE-CCEEEEEC
Confidence 998866678999999999999999999998877642 211 1236899998777899999999 68999999
Q ss_pred CCeEEEEec
Q 015211 398 NPVFVIYGT 406 (411)
Q Consensus 398 ~~~yi~~~~ 406 (411)
+++|+++.+
T Consensus 274 ~~~y~~~~~ 282 (329)
T 1dpj_A 274 PYDYTLEVS 282 (329)
T ss_dssp TTTSEEEET
T ss_pred HHHhEecCC
Confidence 999999865
No 5
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=384.36 Aligned_cols=268 Identities=20% Similarity=0.351 Sum_probs=221.6
Q ss_pred CCceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCC
Q 015211 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (411)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 168 (411)
....+++.|+.+..|+++|.||||+|+|.|++||||+++||+|. .|.... |..++.|||++|+|++..
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~--- 78 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV--YCTSPA-------CKTHSRFQPSQSSTYSQP--- 78 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGG-------GTTSCCBCGGGCTTCBCC---
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccc-------cCCCCcCCcccCcceEEC---
Confidence 33457788888999999999999999999999999999999995 443222 335689999999999984
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEe
Q 015211 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (411)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (411)
+|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+.....|||||
T Consensus 79 ---------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilG 133 (351)
T 1tzs_A 79 ---------------GQSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILG 133 (351)
T ss_dssp ---------------SCEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred ---------------CCEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEe
Confidence 49999999997 5899999999999875 6779999999988775544456799999
Q ss_pred cCCCCCC------hHHHHHhcCCC-cceeEEeecCCC----CceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEe
Q 015211 249 LGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCI 316 (411)
Q Consensus 249 Lg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~~----~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~v 316 (411)
||++.++ +..+|++||+| +++||+||.+.. .|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+|
T Consensus 134 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 212 (351)
T 1tzs_A 134 LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ-AYWQIALDNIQV 212 (351)
T ss_dssp CSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE-TTEEEEEEEEEE
T ss_pred cCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC-ceEEEEeCEEEE
Confidence 9998765 46679999999 699999998853 7999999999876 466777776654 799999999999
Q ss_pred CCeee-ccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEE
Q 015211 317 GSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 395 (411)
Q Consensus 317 gg~~~-~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~ 395 (411)
|++.+ ......+||||||++++||+++|++|.+++... ... +. |.++|.....+|+|+|+| +|++++
T Consensus 213 ~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~-g~------~~~~C~~~~~~P~i~f~f-~g~~~~ 280 (351)
T 1tzs_A 213 GGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAA----PVD-GE------YAVECANLNVMPDVTFTI-NGVPYT 280 (351)
T ss_dssp TTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECS-SS------EEECGGGGGGSCCEEEEE-TTEEEE
T ss_pred CCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCc----ccC-Ce------EEEeCCCCccCCcEEEEE-CCEEEE
Confidence 99885 345678999999999999999999888776432 221 22 778897767899999999 799999
Q ss_pred EeCCeEEEEec
Q 015211 396 VNNPVFVIYGT 406 (411)
Q Consensus 396 i~~~~yi~~~~ 406 (411)
|++++|+++..
T Consensus 281 i~~~~yi~~~~ 291 (351)
T 1tzs_A 281 LSPTAYTLLDF 291 (351)
T ss_dssp ECTTTSEECC-
T ss_pred ECHHHhEeecc
Confidence 99999998865
No 6
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.5e-49 Score=381.70 Aligned_cols=267 Identities=22% Similarity=0.353 Sum_probs=220.3
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.++|.|+.+..|+++|.||||||++.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~~----- 67 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI--YCKSNV-------CKNHHRFDPRKSSTFRNLG----- 67 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHH-------HHTSCCBCGGGCTTCEEEE-----
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC--CCCccc-------cCCCCCCCCCCCcCeEcCC-----
Confidence 35788999999999999999999999999999999999995 443222 3356899999999999864
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+....+..+.....+||||||+
T Consensus 68 -------------~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 68 -------------KPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp -------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred -------------cEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEecCc
Confidence 8999999997 5899999999999875 6789999999988774444446799999998
Q ss_pred CCCC------hHHHHHhcCCC-cceeEEeecCC-CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeec
Q 015211 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLK 322 (411)
Q Consensus 252 ~~~s------~~~~l~~~~~i-~~~FS~cL~~~-~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~ 322 (411)
+.++ +..+|++||+| +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||++.+.
T Consensus 125 ~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~ 203 (320)
T 4aa9_A 125 PSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ-QYWQFTVDSVTINGVAVA 203 (320)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB-TTBEEEECEEEETTEEEE
T ss_pred ccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC-CceEEEEeEEEECCEEec
Confidence 7654 56789999999 79999999985 68999999999987 578888888754 899999999999998875
Q ss_pred -cCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeE
Q 015211 323 -QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVF 401 (411)
Q Consensus 323 -~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~y 401 (411)
.....+||||||++++||+++|++|.+++. +.....+ .|.++|.....+|+|+|+| +|++++|++++|
T Consensus 204 ~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~----~~~~~~g------~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y 272 (320)
T 4aa9_A 204 CVGGCQAILDTGTSVLFGPSSDILKIQMAIG----ATENRYG------EFDVNCGNLRSMPTVVFEI-NGRDYPLSPSAY 272 (320)
T ss_dssp STTCEEEEECTTCSSEEEEHHHHHHHHHHTT----CEECTTS------CEEECGGGGGGCCCEEEEE-TTEEEEECHHHH
T ss_pred cCCCcEEEEECCCCcEECCHHHHHHHHHHhC----CcccCCC------cEEEeCCCCCcCceEEEEE-CCEEEEECHHHh
Confidence 356789999999999999999888877663 3222112 3889998777899999999 799999999999
Q ss_pred EEEecc
Q 015211 402 VIYGTQ 407 (411)
Q Consensus 402 i~~~~~ 407 (411)
+++.+.
T Consensus 273 ~~~~~~ 278 (320)
T 4aa9_A 273 TSKDQG 278 (320)
T ss_dssp EEEETT
T ss_pred ccCCCC
Confidence 987543
No 7
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=2.9e-48 Score=377.67 Aligned_cols=265 Identities=20% Similarity=0.357 Sum_probs=222.1
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.++|.|+.+..|+++|.||||||+|.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 5 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~~----- 70 (323)
T 3cms_A 5 SVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI--YCKSNA-------CKNHQRFDPRKSSTFQNLG----- 70 (323)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHH-------HHTSCCBCGGGCTTCEEEE-----
T ss_pred eeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC--CCCccc-------ccCCCCCCCccCCCeEECC-----
Confidence 56788988999999999999999999999999999999995 443222 2346899999999999854
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+.....|||||||+
T Consensus 71 -------------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 127 (323)
T 3cms_A 71 -------------KPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMAY 127 (323)
T ss_dssp -------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEECSC
T ss_pred -------------cEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEecCc
Confidence 8999999997 5899999999999875 6779999999987664332236699999999
Q ss_pred CCCC------hHHHHHhcCCC-cceeEEeecCC-CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeec
Q 015211 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLK 322 (411)
Q Consensus 252 ~~~s------~~~~l~~~~~i-~~~FS~cL~~~-~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~ 322 (411)
+.++ +..+|++|++| +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||++.+.
T Consensus 128 ~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~ 206 (323)
T 3cms_A 128 PSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ-QYWQFTVDSVTISGVVVA 206 (323)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEEE
T ss_pred chhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC-CeEEEEEeeEEECCEEee
Confidence 8654 46779999999 79999999875 45999999999887 568888888764 799999999999998874
Q ss_pred -cCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeE
Q 015211 323 -QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVF 401 (411)
Q Consensus 323 -~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~y 401 (411)
.....+||||||++++||+++|++|.+++.. .....+ .|.++|.....+|+|+|+| +|++++|++++|
T Consensus 207 ~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~----~~~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y 275 (323)
T 3cms_A 207 CEGGCQAILDTGTSKLVGPSSDILNIQQAIGA----TQNQYG------EFDIDCDNLSYMPTVVFEI-NGKMYPLTPSAY 275 (323)
T ss_dssp STTCEEEEECTTCCSEEECHHHHHHHHHHHTC----EEETTT------EEEECTTCTTTSCCEEEEE-TTEEEEECHHHH
T ss_pred cCCCcEEEEecCCccEeCCHHHHHHHHHHhCC----eecCCC------cEEEECCCCccCceEEEEE-CCEEEEECHHHh
Confidence 3567899999999999999999988877642 222112 2778998777899999999 799999999999
Q ss_pred EEEe
Q 015211 402 VIYG 405 (411)
Q Consensus 402 i~~~ 405 (411)
+++.
T Consensus 276 ~~~~ 279 (323)
T 3cms_A 276 TSQD 279 (323)
T ss_dssp EEEE
T ss_pred ccCC
Confidence 9983
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.6e-48 Score=378.16 Aligned_cols=264 Identities=19% Similarity=0.332 Sum_probs=220.5
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.+++.|+.+..|+++|.||||||++.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~~----- 68 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS--HCSAQA-------CSNHNKFKPRQSSTYVETG----- 68 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT--TCCSHH-------HHTSCCBCGGGCTTCEEEE-----
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccc-------ccCCCcCCCccCCCeEeCC-----
Confidence 46788888999999999999999999999999999999995 443222 2346889999999999854
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+.....|||||||+
T Consensus 69 -------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 69 -------------KTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp -------------EEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred -------------cEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEecCC
Confidence 8999999997 5699999999999875 6779999999998776555557799999999
Q ss_pred CCCC------hHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeee
Q 015211 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCL 321 (411)
Q Consensus 252 ~~~s------~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~ 321 (411)
+.++ +..+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||++.+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 204 (324)
T 1am5_A 126 PSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE-KYWQVALDGITVNGQTA 204 (324)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE-TTEEEEECEEEETTEEC
T ss_pred ccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC-cEEEEEEeEEEECCcee
Confidence 8765 46779999999 79999999875 47999999999876 455666665443 79999999999999876
Q ss_pred ccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeE
Q 015211 322 KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVF 401 (411)
Q Consensus 322 ~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~y 401 (411)
......+||||||++++||+++|++|.+++... ...+ .|.++|.....+|+|+|+| +|++++|++++|
T Consensus 205 ~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~~~g------~~~~~C~~~~~~P~i~f~f-~g~~~~i~~~~y 272 (324)
T 1am5_A 205 ACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-----ENQG------EMMGNCASVQSLPDITFTI-NGVKQPLPPSAY 272 (324)
T ss_dssp CCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-----ECCC------CEECCTTSSSSSCCEEEEE-TTEEEEECHHHH
T ss_pred eccCceEEEecCCccEECCHHHHHHHHHHhCCc-----ccCC------cEEEeCCCcccCCcEEEEE-CCEEEEECHHHh
Confidence 423388999999999999999999998877433 1122 2778998777899999999 799999999999
Q ss_pred EEEe
Q 015211 402 VIYG 405 (411)
Q Consensus 402 i~~~ 405 (411)
+++.
T Consensus 273 ~~~~ 276 (324)
T 1am5_A 273 IEGD 276 (324)
T ss_dssp EEES
T ss_pred cccC
Confidence 9886
No 9
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=7.5e-48 Score=375.71 Aligned_cols=265 Identities=21% Similarity=0.371 Sum_probs=221.6
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.++|. +.+..|+++|.||||||++.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~~----- 68 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV--YCQSQA-------CTSHSRFNPSESSTYSTNG----- 68 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHH-------HHTSCCBCGGGCTTCEEEE-----
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCCcc-------cCCCCcCCCccCCCeEECC-----
Confidence 35666 77889999999999999999999999999999995 443222 2346889999999999854
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+.....|||||||+
T Consensus 69 -------------~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (329)
T 1htr_B 69 -------------QTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAY 125 (329)
T ss_dssp -------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECCC
T ss_pred -------------cEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecCC
Confidence 8999999997 5699999999999875 6779999999988775444456799999999
Q ss_pred CCCC------hHHHHHhcCCC-cceeEEeecCCC---CceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCee
Q 015211 252 GEIS------VPSLLAKAGLI-RNSFSMCFDKDD---SGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSC 320 (411)
Q Consensus 252 ~~~s------~~~~l~~~~~i-~~~FS~cL~~~~---~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~ 320 (411)
+.++ +..+|++||+| +++||+||.+.. .|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||++.
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~ 204 (329)
T 1htr_B 126 PALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE-LYWQIGIEEFLIGGQA 204 (329)
T ss_dssp CSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS-SSCEEEECEEEETTEE
T ss_pred CcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC-ceEEEEEeEEEECCce
Confidence 8765 46789999999 799999998864 7999999999887 567888887764 7999999999999987
Q ss_pred ec--cCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeC
Q 015211 321 LK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (411)
Q Consensus 321 ~~--~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~ 398 (411)
+. .....+||||||++++||+++|++|.+++.... ...+. |.++|.....+|+|+|+| +|++++|++
T Consensus 205 ~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~g~------~~~~C~~~~~~P~i~f~f-~g~~~~i~~ 273 (329)
T 1htr_B 205 SGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE----DEYGQ------FLVNCNSIQNLPSLTFII-NGVEFPLPP 273 (329)
T ss_dssp CCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----CTTSC------EEECGGGGGGSCCEEEEE-TTEEEEECH
T ss_pred eeecCCCceEEEecCCccEECCHHHHHHHHHHhCCee----cCCCe------EEEeCCCcccCCcEEEEE-CCEEEEECH
Confidence 64 456789999999999999999999988774322 21222 778887767899999999 799999999
Q ss_pred CeEEEEec
Q 015211 399 PVFVIYGT 406 (411)
Q Consensus 399 ~~yi~~~~ 406 (411)
++|+++..
T Consensus 274 ~~y~~~~~ 281 (329)
T 1htr_B 274 SSYILSNN 281 (329)
T ss_dssp HHHEEECS
T ss_pred HHhcccCC
Confidence 99998864
No 10
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=7e-48 Score=389.08 Aligned_cols=264 Identities=18% Similarity=0.290 Sum_probs=218.0
Q ss_pred ceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCC
Q 015211 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (411)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 170 (411)
..+++.|+.+..|+++|.||||||++.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 128 ~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~--~C~~~~-------C~~~~~ydps~SsT~~~~~---- 194 (453)
T 2bju_A 128 DNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV--KCTTAG-------CLTKHLYDSSKSRTYEKDG---- 194 (453)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSTT-------GGGSCCBCGGGCTTCEEEE----
T ss_pred CceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc--CCCccc-------cCCCCcCCCccCCceeECC----
Confidence 457888888999999999999999999999999999999995 443222 3346899999999999854
Q ss_pred CCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeecc--CCCCCCCCCceEEe
Q 015211 171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQS--GGYLDGVAPDGLIG 248 (411)
Q Consensus 171 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~--g~~~~~~~~dGIlG 248 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++ +.|||+..+. |..+.....|||||
T Consensus 195 --------------~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlG 249 (453)
T 2bju_A 195 --------------TKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDGILG 249 (453)
T ss_dssp --------------EEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCEEEE
T ss_pred --------------cEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCceeEe
Confidence 9999999997 4899999999999875 566 9999999887 65443346799999
Q ss_pred cCCCCCC------hHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCC
Q 015211 249 LGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGS 318 (411)
Q Consensus 249 Lg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg 318 (411)
||++.++ +..+|++||+| +++||+||.++ .+|.|+||++|+.+ .+.+.|+|+... .+|.|.++ |+||+
T Consensus 250 Lg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~-~~w~V~l~-I~Vgg 327 (453)
T 2bju_A 250 LGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD-LYWQITLD-AHVGN 327 (453)
T ss_dssp CSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE-TTEEEEEE-EEETT
T ss_pred ccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC-ceEEEEEE-EEECc
Confidence 9998654 45789999999 69999999885 57999999999887 567777776543 79999999 99999
Q ss_pred eeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeC
Q 015211 319 SCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (411)
Q Consensus 319 ~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~ 398 (411)
+. . ....+||||||++++||+++|++|.+++ ++.....+ .+|.++|.. ..+|+|+|+| ||++++|++
T Consensus 328 ~~-~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i----~~~~~~~g-----~~~~v~C~~-~~~P~itf~f-gg~~~~l~~ 394 (453)
T 2bju_A 328 IM-L-EKANCIVDSGTSAITVPTDFLNKMLQNL----DVIKVPFL-----PFYVTLCNN-SKLPTFEFTS-ENGKYTLEP 394 (453)
T ss_dssp EE-E-EEEEEEECTTCCSEEECHHHHHHHTTTS----SCEECTTS-----SCEEEETTC-TTCCCEEEEC-SSCEEEECH
T ss_pred EE-e-ccccEEEcCCCCeEecCHHHHHHHHHHh----CCcccCCC-----ceEEEecCC-CCCCcEEEEE-CCEEEEECH
Confidence 43 3 6778999999999999999988876654 33221111 138889976 6899999999 799999999
Q ss_pred CeEEEEecc
Q 015211 399 PVFVIYGTQ 407 (411)
Q Consensus 399 ~~yi~~~~~ 407 (411)
++|+++.++
T Consensus 395 ~~yi~~~~~ 403 (453)
T 2bju_A 395 EYYLQHIED 403 (453)
T ss_dssp HHHEEECTT
T ss_pred HHhEeeccc
Confidence 999998753
No 11
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=6.1e-48 Score=378.04 Aligned_cols=268 Identities=22% Similarity=0.359 Sum_probs=225.0
Q ss_pred CCceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccC
Q 015211 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSC 167 (411)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C 167 (411)
+...++|.|+.+..||++|.||||||++.|++||||+++||+|. |..|. . .|..++.|||++|+|++..
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~-~-------~C~~~~~y~~~~SsT~~~~-- 75 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY-T-------ACVYHKLFDASDSSSYKHN-- 75 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC-H-------HHHTSCCBCGGGCTTCEEE--
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC-C-------cccCCCCCCCCcCcCeeEC--
Confidence 45578899999999999999999999999999999999999995 54221 1 1335689999999999984
Q ss_pred CCCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEE
Q 015211 168 SHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLI 247 (411)
Q Consensus 168 ~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIl 247 (411)
.|.|.+.|++| ++.|.+++|+|+|++. .+ ++.|||+....+..+.....||||
T Consensus 76 ----------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~Gil 128 (341)
T 3k1w_A 76 ----------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVV 128 (341)
T ss_dssp ----------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEE
T ss_pred ----------------CCEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEE
Confidence 49999999997 5899999999999875 56 999999998876533344679999
Q ss_pred ecCCCCCC------hHHHHHhcCCC-cceeEEeecCCC------CceEEEccCCCCC-ceEeeeeecCCCceeEEEeeee
Q 015211 248 GLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD------SGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVET 313 (411)
Q Consensus 248 GLg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~~------~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~ 313 (411)
|||++..+ ++.+|++||+| +++||+||.++. .|.|+||++|+.+ .+.+.|+|+... .+|.|.+++
T Consensus 129 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~ 207 (341)
T 3k1w_A 129 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKG 207 (341)
T ss_dssp ECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST-TSCEEEECC
T ss_pred ECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC-CEEEEEEeE
Confidence 99998765 57789999999 699999998764 7999999999987 578888888754 899999999
Q ss_pred eEeCCeee-ccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCc
Q 015211 314 CCIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNN 392 (411)
Q Consensus 314 i~vgg~~~-~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~ 392 (411)
|+||++.+ ......+||||||++++||+++|++|.+++... ... . . |.++|.....+|+|+|+| +|+
T Consensus 208 i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~~~-~----g--~~~~C~~~~~~p~i~f~f-~g~ 275 (341)
T 3k1w_A 208 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK----KRL-F----D--YVVKCNEGPTLPDISFHL-GGK 275 (341)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----ECS-S----C--EEEEGGGGGGCCCEEEEE-TTE
T ss_pred EEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCe----ecC-C----C--eEEeCCCCCcCCcEEEEE-CCE
Confidence 99999964 345678999999999999999999988776432 211 1 1 888998777899999999 799
Q ss_pred EEEEeCCeEEEEec
Q 015211 393 SFVVNNPVFVIYGT 406 (411)
Q Consensus 393 ~~~i~~~~yi~~~~ 406 (411)
+++|++++|+++..
T Consensus 276 ~~~l~~~~~~~~~~ 289 (341)
T 3k1w_A 276 EYTLTSADYVFQES 289 (341)
T ss_dssp EEEECHHHHBCCSC
T ss_pred EEEECHHHheeEcc
Confidence 99999999998754
No 12
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.9e-47 Score=372.32 Aligned_cols=267 Identities=20% Similarity=0.325 Sum_probs=219.2
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.+++.|. +..|+++|.||||+|+|.|++||||+++||+|.|..|...........|..++.|||++|+|++...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (334)
T 1j71_A 4 PTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLN----- 77 (334)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEE-----
T ss_pred eEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCC-----
Confidence 4566665 7899999999999999999999999999999752234321000011235678899999999999854
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+.... ..+||||||+
T Consensus 78 -------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~ 128 (334)
T 1j71_A 78 -------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGIGF 128 (334)
T ss_dssp -------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSC
T ss_pred -------------CceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEEEcC
Confidence 9999999997 66899999999999875 67899999998763 4599999999
Q ss_pred CCC--------ChHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCe
Q 015211 252 GEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSS 319 (411)
Q Consensus 252 ~~~--------s~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~ 319 (411)
+.+ +++.+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+||++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~ 207 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS-VELRVHLGSINFDGT 207 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS-SSCEEEEEEEEETTE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC-CeEEEEEeEEEECCE
Confidence 865 678999999999 69999999863 57999999999987 567888887765 699999999999999
Q ss_pred eeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEe-ecCCCCCCCCeEEEEeCCCcEEEEeC
Q 015211 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYK-SSSQRLPKLPSVKLMFPQNNSFVVNN 398 (411)
Q Consensus 320 ~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~-~~~~~~~~~P~i~f~f~gg~~~~i~~ 398 (411)
.+. ....+||||||++++||+++|++|.++|..... ... ..|. ++|.. +|+|+|+|.||++++|++
T Consensus 208 ~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~-----~~~~~~~C~~---~p~i~f~f~~g~~~~i~~ 274 (334)
T 1j71_A 208 SVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SRN-----EIYRLPSCDL---SGDAVFNFDQGVKITVPL 274 (334)
T ss_dssp EEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTT-----TEEECSSSCC---CSEEEEEESTTCEEEEEG
T ss_pred ecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCC-----ceEEEEcCCC---CCceEEEEcCCcEEEECH
Confidence 886 457899999999999999999999888765441 111 1266 78863 799999997799999999
Q ss_pred CeEEEEecc
Q 015211 399 PVFVIYGTQ 407 (411)
Q Consensus 399 ~~yi~~~~~ 407 (411)
++|+++.++
T Consensus 275 ~~y~~~~~~ 283 (334)
T 1j71_A 275 SELILKDSD 283 (334)
T ss_dssp GGGEEECSS
T ss_pred HHheeecCC
Confidence 999998654
No 13
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=1.6e-47 Score=375.25 Aligned_cols=268 Identities=21% Similarity=0.342 Sum_probs=217.8
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.+++.| .+..|+++|.||||+|+|.|++||||+++||+|.|..|....+......|..++.|||++|+|++...
T Consensus 4 ~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~----- 77 (342)
T 2qzx_A 4 AVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLN----- 77 (342)
T ss_dssp EEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEE-----
T ss_pred eEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCC-----
Confidence 456666 46799999999999999999999999999999752234321111111246678899999999999864
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+.... ..+||||||+
T Consensus 78 -------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilGLg~ 128 (342)
T 2qzx_A 78 -------------TRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILGIGF 128 (342)
T ss_dssp -------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEECSC
T ss_pred -------------CcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEEEcc
Confidence 9999999997 67899999999999875 67899999998763 4599999999
Q ss_pred CCC--------ChHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCe
Q 015211 252 GEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSS 319 (411)
Q Consensus 252 ~~~--------s~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~ 319 (411)
+.. +++.+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+||++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~ 207 (342)
T 2qzx_A 129 QSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE-KKLTVGLRSVNVRGR 207 (342)
T ss_dssp GGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEETTE
T ss_pred ccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC-ceEEEEEeEEEECCE
Confidence 865 678899999999 69999999863 57999999999877 567777777655 699999999999999
Q ss_pred eeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCC
Q 015211 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNP 399 (411)
Q Consensus 320 ~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~ 399 (411)
.+. ....+||||||++++||+++|++|.++|.......+. . ...|.++|.. +|+|+|+|.||++++|+++
T Consensus 208 ~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~-~-----~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~ 277 (342)
T 2qzx_A 208 NVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA-G-----NKVYVADCKT---SGTIDFQFGNNLKISVPVS 277 (342)
T ss_dssp EEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT-S-----CEEEEECTTC---CCEEEEEETTTEEEEEEGG
T ss_pred ecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC-C-----CcEEEEECCC---CCcEEEEECCCcEEEEcHH
Confidence 886 4578999999999999999999998887654421111 1 1137889974 7999999977899999999
Q ss_pred eEEEEe
Q 015211 400 VFVIYG 405 (411)
Q Consensus 400 ~yi~~~ 405 (411)
+|+++.
T Consensus 278 ~~~~~~ 283 (342)
T 2qzx_A 278 EFLFQT 283 (342)
T ss_dssp GGEECC
T ss_pred Hhcccc
Confidence 999974
No 14
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.4e-48 Score=375.36 Aligned_cols=262 Identities=19% Similarity=0.257 Sum_probs=214.1
Q ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 015211 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (411)
Q Consensus 97 ~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 175 (411)
.+.+..|+++|.||||+|+|.|++||||+++||+|. |..|. |..++.|||++|+|++.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~----------~~~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSS----------ATGHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHH----------HTTSCCBCGGGCTTCEECT---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccc----------cCCCCcCCcccCcCceEcC---------
Confidence 456789999999999999999999999999999996 76653 3346899999999999864
Q ss_pred CCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC
Q 015211 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 255 (411)
Q Consensus 176 ~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s 255 (411)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+..+.+.+......|||||||++.++
T Consensus 72 --------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 134 (329)
T 3c9x_A 72 --------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGN 134 (329)
T ss_dssp --------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGC
T ss_pred --------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCccccc
Confidence 48999999997 56899999999999875 67799999999877655433467999999998655
Q ss_pred ---------hHHHHHhcCCCcceeEEeecCCCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeeccCc
Q 015211 256 ---------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTS 325 (411)
Q Consensus 256 ---------~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~ 325 (411)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|.|++|+||++.+....
T Consensus 135 ~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 213 (329)
T 3c9x_A 135 QVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNS 213 (329)
T ss_dssp CCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCC
T ss_pred ccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCC
Confidence 45668765 337999999998778999999999876 4567777765334799999999999999887677
Q ss_pred ccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEe
Q 015211 326 FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 405 (411)
Q Consensus 326 ~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~ 405 (411)
+.+||||||++++||+++|++|.+++.. +....... -|.++|. ..+|+|+|+| +|++++||+++|+++.
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i~~---a~~~~~~~-----~~~~~C~--~~~P~i~f~f-~g~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANVQS---AQYDNQQE-----GVVFDCD--EDLPSFSFGV-GSSTITIPGDLLNLTP 282 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTCTT---CEEETTTT-----EEEEETT--CCCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhCCC---cEEcCCCC-----EEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeec
Confidence 8999999999999999998887765532 21111111 1778887 4789999999 6999999999999875
Q ss_pred c
Q 015211 406 T 406 (411)
Q Consensus 406 ~ 406 (411)
.
T Consensus 283 ~ 283 (329)
T 3c9x_A 283 L 283 (329)
T ss_dssp S
T ss_pred c
Confidence 3
No 15
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.7e-47 Score=371.18 Aligned_cols=257 Identities=25% Similarity=0.426 Sum_probs=214.9
Q ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCC
Q 015211 97 NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLG 175 (411)
Q Consensus 97 ~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~ 175 (411)
++.+..|+++|.||||+|+|.|++||||+++||+|. |..| . ..++.|||++|+|++..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~----------~~~~~y~~~~SsT~~~~---------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G----------SGQTKYDPNQSSTYQAD---------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C----------TTSCCBCGGGCTTCEEE----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h----------cCCCCCCcccCCCeeeC----------
Confidence 566789999999999999999999999999999997 8777 1 13689999999999984
Q ss_pred CCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC
Q 015211 176 TSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS 255 (411)
Q Consensus 176 ~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s 255 (411)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+....+.|... ..|||||||++.++
T Consensus 70 --------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s 131 (325)
T 2apr_A 70 --------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGC
T ss_pred --------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccc
Confidence 49999999997 56899999999999875 67799999999876654332 47999999998754
Q ss_pred -------hHHHHHhcCCC-cceeEEeecC---CCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeecc
Q 015211 256 -------VPSLLAKAGLI-RNSFSMCFDK---DDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQ 323 (411)
Q Consensus 256 -------~~~~l~~~~~i-~~~FS~cL~~---~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~ 323 (411)
++.+|++||+| +++||+||.+ ...|.|+||++|+.+ .+.+.|+|+.....+|.|.+++|+||+ .+..
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~~ 210 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STVA 210 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEEE
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-EecC
Confidence 56789999988 7999999954 457999999999876 456777776543479999999999999 4444
Q ss_pred CcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEE
Q 015211 324 TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVI 403 (411)
Q Consensus 324 ~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~ 403 (411)
..+.+||||||++++||+++|++++++|.+++... +. |.++|.. ..+|+|+|+| +|.+++||+++|++
T Consensus 211 ~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~----g~------~~~~C~~-~~~p~i~f~f-~g~~~~ip~~~~~~ 278 (325)
T 2apr_A 211 SSFDGILDTGTTLLILPNNIAASVARAYGASDNGD----GT------YTISCDT-SAFKPLVFSI-NGASFQVSPDSLVF 278 (325)
T ss_dssp CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS----SC------EEECSCG-GGCCCEEEEE-TTEEEEECGGGGEE
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHHhcccCCC----Ce------EEEECCC-CCCCcEEEEE-CCEEEEECHHHEEE
Confidence 67899999999999999999999999987765432 22 7788874 3589999999 56699999999998
Q ss_pred Ee
Q 015211 404 YG 405 (411)
Q Consensus 404 ~~ 405 (411)
+.
T Consensus 279 ~~ 280 (325)
T 2apr_A 279 EE 280 (325)
T ss_dssp EE
T ss_pred cC
Confidence 75
No 16
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=2.5e-47 Score=376.67 Aligned_cols=270 Identities=19% Similarity=0.235 Sum_probs=219.6
Q ss_pred ceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCC
Q 015211 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (411)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~ 169 (411)
..+++.|+.+..|+++|.||||+|+|.|+|||||+++||+|. |.. ... |..++.|||++|+|++...
T Consensus 8 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~--~~~-------C~~~~~y~~~~SsT~~~~~--- 75 (361)
T 1mpp_A 8 DTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDN--SEG-------CVGKRFFDPSSSSTFKETD--- 75 (361)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCG--GGT-------CCSSCCBCGGGCTTCEEEE---
T ss_pred ceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCC--Ccc-------CCCCCcCCCccCCceEecC---
Confidence 357888988999999999999999999999999999999996 650 111 2346889999999999854
Q ss_pred CCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccC-----CCCCCCCCc
Q 015211 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSG-----GYLDGVAPD 244 (411)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g-----~~~~~~~~d 244 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+ .++.....+
T Consensus 76 ---------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~~~~ 130 (361)
T 1mpp_A 76 ---------------YNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSELFLD 130 (361)
T ss_dssp ---------------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSSCCC
T ss_pred ---------------CeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccCCCC
Confidence 8999999997 4899999999999875 678999999999877 445445779
Q ss_pred eEEecCCCCCCh------------HHHHHhcCCC-cceeEEeecCC-CCceEEEccCCCCC-ceEeeeeecCCC---cee
Q 015211 245 GLIGLGLGEISV------------PSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPAT-QQSTSFLASNGK---YIT 306 (411)
Q Consensus 245 GIlGLg~~~~s~------------~~~l~~~~~i-~~~FS~cL~~~-~~G~l~fG~~d~~~-~~~~p~v~~~~~---~~~ 306 (411)
||||||++.++. +.+|++||+| +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... ..+
T Consensus 131 GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~ 210 (361)
T 1mpp_A 131 GIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFF 210 (361)
T ss_dssp EEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEE
T ss_pred CEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeE
Confidence 999999986654 4579999999 69999999985 57999999999876 344445444332 228
Q ss_pred EEEeeeeeEeCCeeec-cCcccEE-EecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCC-Ce
Q 015211 307 YIIGVETCCIGSSCLK-QTSFKAI-VDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKL-PS 383 (411)
Q Consensus 307 y~v~l~~i~vgg~~~~-~~~~~~i-iDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~-P~ 383 (411)
|.|.|++|+|+++.+. .....+| |||||++++||+++|++|.++|..... ...+ .|.++|.....+ |+
T Consensus 211 ~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~---~~~g------~~~~~C~~~~~~~p~ 281 (361)
T 1mpp_A 211 WDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT---ESQQ------GYTVPCSKYQDSKTT 281 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE---EETT------EEEEEHHHHTTCCCE
T ss_pred EEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc---CCCC------cEEEECCCcccCCCc
Confidence 9999999999998873 3567899 999999999999999999887754321 1111 277888765677 99
Q ss_pred EEEEeC-C-----CcEEEEeCCeEEEEec
Q 015211 384 VKLMFP-Q-----NNSFVVNNPVFVIYGT 406 (411)
Q Consensus 384 i~f~f~-g-----g~~~~i~~~~yi~~~~ 406 (411)
|+|+|. | |++++|++++|+++..
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~ 310 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVD 310 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECS
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecC
Confidence 999994 4 8999999999999864
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=4e-47 Score=380.51 Aligned_cols=287 Identities=20% Similarity=0.338 Sum_probs=219.6
Q ss_pred eeeec-CCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCC
Q 015211 92 TMSLG-NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (411)
Q Consensus 92 ~~~l~-~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 170 (411)
.+|+. |+.+.+||++|.||||||+|.|+|||||+++||+|. .| .+|+|++.++|.+.
T Consensus 11 ~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~~--------------------~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 11 VLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--QQ--------------------YSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SC--------------------CCCSSCBCCCTTBH
T ss_pred EEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--CC--------------------CCCCCCCccCCCCc
Confidence 56777 778899999999999999999999999999999993 22 35899999999988
Q ss_pred CCCCCC--CC---CCC------CCCCceeeeeC-CCCceeeeeEEEEEEEeecCCCCc---ccccccccEEEEeEeeccC
Q 015211 171 LCDLGT--SC---QNP------KQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNA---LKNSVQASVIIGCGMKQSG 235 (411)
Q Consensus 171 ~C~~~~--~C---~~~------~~~c~~~~~Y~-~g~s~~~G~~~~D~v~l~~~~~~~---~~~~~~~~~~fG~~~~~~g 235 (411)
.|.... .| .++ .+.|.|.+.|+ +| +.+.|.+++|+|+|++.++.. .....++++.|||+..+.+
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCCCCcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 886431 12 111 14699999998 64 689999999999998743210 0013567899999998754
Q ss_pred CCCCCCCCceEEecCCCCCChHHHHHhcCCCcceeEEeecC--CCCceEEEccCCCCC------------ceEeeeeecC
Q 015211 236 GYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDK--DDSGRIFFGDQGPAT------------QQSTSFLASN 301 (411)
Q Consensus 236 ~~~~~~~~dGIlGLg~~~~s~~~~l~~~~~i~~~FS~cL~~--~~~G~l~fG~~d~~~------------~~~~p~v~~~ 301 (411)
..+.....|||||||++.++++.||++..+.+++||+||.+ +.+|.|+||+ |+.+ ..++|++..+
T Consensus 148 ~~~~~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~ 226 (403)
T 3aup_A 148 QKGLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL 226 (403)
T ss_dssp SSSSSTTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT
T ss_pred ccCCCCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC
Confidence 41122467999999999999999997655557999999987 3679999999 6533 2345554432
Q ss_pred CCceeEEEeeeeeEeCCeee-cc-Cc---------ccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccce
Q 015211 302 GKYITYIIGVETCCIGSSCL-KQ-TS---------FKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 370 (411)
Q Consensus 302 ~~~~~y~v~l~~i~vgg~~~-~~-~~---------~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~C 370 (411)
..+|+|+|++|+||++.+ .. .. ..+||||||++++||+++|++|.++|.++++..........+++|
T Consensus 227 --~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c 304 (403)
T 3aup_A 227 --QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLC 304 (403)
T ss_dssp --TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCE
T ss_pred --CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCce
Confidence 269999999999999987 41 22 249999999999999999999999998877543221122345788
Q ss_pred EeecCCCCCCCCeEEEEeCCC--cEEEEeCCeEEEEec
Q 015211 371 YKSSSQRLPKLPSVKLMFPQN--NSFVVNNPVFVIYGT 406 (411)
Q Consensus 371 y~~~~~~~~~~P~i~f~f~gg--~~~~i~~~~yi~~~~ 406 (411)
| +|.....+|+|+|+|.|+ ++|+|++++|+++.+
T Consensus 305 ~--~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~ 340 (403)
T 3aup_A 305 F--NSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ 340 (403)
T ss_dssp E--CGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-
T ss_pred E--ECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcC
Confidence 6 476556899999999655 699999999999864
No 18
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=7.7e-47 Score=374.66 Aligned_cols=262 Identities=18% Similarity=0.306 Sum_probs=218.8
Q ss_pred CceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCC
Q 015211 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (411)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~ 169 (411)
...+++.|+.+..|+++|.||||||+|.|++||||+++||+|. .|.... |..++.|||++|+|++...
T Consensus 51 ~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~-------C~~~~~y~~~~SsT~~~~~--- 118 (375)
T 1miq_A 51 NDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK--KCNSSG-------CSIKNLYDSSKSKSYEKDG--- 118 (375)
T ss_dssp TBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT--TCCSSG-------GGGSCCBCGGGCTTCEEEE---
T ss_pred cceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC--CCCccc-------ccCCCcCCCccCCceEECC---
Confidence 3457888888999999999999999999999999999999995 443323 3346899999999999853
Q ss_pred CCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEee----ccCCCCCCCCCce
Q 015211 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPDG 245 (411)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~dG 245 (411)
|.|.+.|++| ++.|.+++|+|+|++. .+++ .|||+.. +. .| .....||
T Consensus 119 ---------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f-~~~~~dG 170 (375)
T 1miq_A 119 ---------------TKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY-SSVEFDG 170 (375)
T ss_dssp ---------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH-HHSCCCE
T ss_pred ---------------cEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc-ccCCCce
Confidence 8999999997 4899999999999875 5677 9999998 54 22 2236799
Q ss_pred EEecCCCCCC------hHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeE
Q 015211 246 LIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCC 315 (411)
Q Consensus 246 IlGLg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~ 315 (411)
|||||++.++ +..+|++||+| +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.++ |+
T Consensus 171 ilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~-i~ 248 (375)
T 1miq_A 171 ILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD-LYWQIDLD-VH 248 (375)
T ss_dssp EEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS-SSSEEEEE-EE
T ss_pred EEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC-ceEEEEEE-EE
Confidence 9999998765 46789999999 69999999886 37999999999887 568888888654 79999999 99
Q ss_pred eCCeeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEE
Q 015211 316 IGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFV 395 (411)
Q Consensus 316 vgg~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~ 395 (411)
||++.+ ....+||||||++++||+++|++|.+++.... ....+. |.++|.. ..+|+|+|+| ||++++
T Consensus 249 v~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~---~~~~g~------~~~~C~~-~~~P~i~f~f-~g~~~~ 315 (375)
T 1miq_A 249 FGKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIK---VPFLPF------YVTTCDN-KEMPTLEFKS-ANNTYT 315 (375)
T ss_dssp ETTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE---CTTSSC------EEEETTC-TTCCCEEEEC-SSCEEE
T ss_pred ECCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCcc---cCCCCe------EEEECCC-CCCCcEEEEE-CCEEEE
Confidence 999988 57889999999999999999999988775431 111121 7788876 6899999999 799999
Q ss_pred EeCCeEEEEec
Q 015211 396 VNNPVFVIYGT 406 (411)
Q Consensus 396 i~~~~yi~~~~ 406 (411)
|++++|+++..
T Consensus 316 l~~~~yi~~~~ 326 (375)
T 1miq_A 316 LEPEYYMNPIL 326 (375)
T ss_dssp ECGGGSEEESS
T ss_pred ECHHHhEeecc
Confidence 99999999875
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.5e-47 Score=373.51 Aligned_cols=259 Identities=22% Similarity=0.286 Sum_probs=212.2
Q ss_pred CCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 015211 98 DFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (411)
Q Consensus 98 ~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 176 (411)
+.+..|+++|.||||+|+|.|++||||+++||+|. |..|. | .++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~----------~-~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASE----------V-XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGG----------C--CCCBCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCccc----------c-ccCccCCccCccceecC----------
Confidence 45778999999999999999999999999999997 76664 2 35889999999999864
Q ss_pred CCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC-
Q 015211 177 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 255 (411)
Q Consensus 177 ~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s- 255 (411)
.|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+..+.+.+......|||||||++.++
T Consensus 71 -------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 134 (329)
T 1oew_A 71 -------GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNT 134 (329)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccc
Confidence 48999999997 56899999999999875 67899999999877655433467999999998655
Q ss_pred --------hHHHHHhcCCCcceeEEeecCCCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeeccCcc
Q 015211 256 --------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSF 326 (411)
Q Consensus 256 --------~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~ 326 (411)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|.+++|+||++.+....+
T Consensus 135 ~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1oew_A 135 VSPTQQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSI 213 (329)
T ss_dssp CBSSCCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEE
T ss_pred cCcCCCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCc
Confidence 35678776 337999999998778999999999877 45667777653347999999999999988765678
Q ss_pred cEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEe
Q 015211 327 KAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 405 (411)
Q Consensus 327 ~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~ 405 (411)
.+||||||++++||+++|++|.++|.. +....... -|.++|. ..+|+|+|+| ||++++||+++|+++.
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~i~~---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~ip~~~~~~~~ 281 (329)
T 1oew_A 214 DGIADTGTTLLYLPATVVSAYWAQVSG---AKSSSSVG-----GYVFPCS--ATLPSFTFGV-GSARIVIPGDYIDFGP 281 (329)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTT-----EEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred eEEEeCCCCCEECCHHHHHHHHHhCCC---cEEcCCCC-----EEEEECC--CCCCcEEEEE-CCEEEEECHHHeeeee
Confidence 999999999999999998887765532 21111111 1778897 4789999999 8999999999999875
No 20
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=9.5e-47 Score=384.28 Aligned_cols=226 Identities=26% Similarity=0.357 Sum_probs=189.6
Q ss_pred CceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCC
Q 015211 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSH 169 (411)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~ 169 (411)
...+++.|+.+..||++|.||||||+|.|+|||||+++||+|. .|... ..|..++.|||++|+||+..
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~--~C~~~------~~C~~~~~y~~~~SsT~~~~---- 108 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA--KCYFS------IACYLHSRYKAGASSTYKKN---- 108 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT--TCCSC------GGGGGSCCBCGGGCTTCBCC----
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC--CCCCC------ccccCCCCCCcccCCCeeeC----
Confidence 4467888998999999999999999999999999999999995 44311 11335689999999999974
Q ss_pred CCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEec
Q 015211 170 RLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGL 249 (411)
Q Consensus 170 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGL 249 (411)
+|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+....+||||||
T Consensus 109 --------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGIlGL 164 (478)
T 1qdm_A 109 --------------GKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILGL 164 (478)
T ss_dssp --------------CCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEEC
T ss_pred --------------CcEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccceecc
Confidence 48999999997 5899999999999875 67799999999877643333467999999
Q ss_pred CCCCCCh------HHHHHhcCCC-cceeEEeecCC----CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeC
Q 015211 250 GLGEISV------PSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIG 317 (411)
Q Consensus 250 g~~~~s~------~~~l~~~~~i-~~~FS~cL~~~----~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg 317 (411)
|++.++. ..+|++||+| +++||+||.++ .+|.|+||++|+.+ .+.+.|+|+... .+|+|.+++|+||
T Consensus 165 g~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~-~~w~v~l~~i~v~ 243 (478)
T 1qdm_A 165 GFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK-GYWQFDMGDVLVG 243 (478)
T ss_dssp SCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE-TTEEEEECCEEET
T ss_pred cccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC-CeEEEEEeEEEEC
Confidence 9998764 4569999999 69999999875 37999999999987 567777777644 7999999999999
Q ss_pred Ceeec--cCcccEEEecCCcccccCHHHHHHHHHHHH
Q 015211 318 SSCLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFD 352 (411)
Q Consensus 318 g~~~~--~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~ 352 (411)
++.+. .....+||||||++++||+++|++|.++|.
T Consensus 244 g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~ 280 (478)
T 1qdm_A 244 GKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIG 280 (478)
T ss_dssp TEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHT
T ss_pred CEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhC
Confidence 98764 356789999999999999999999988774
No 21
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=8.3e-46 Score=362.66 Aligned_cols=261 Identities=21% Similarity=0.315 Sum_probs=216.0
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC---CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 168 (411)
.+++.+. +..|+++|.||||||++.|++||||+++||++. |..|. .|..++.|||++|+|++...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~---------~C~~~~~y~~~~SsT~~~~~-- 71 (339)
T 3fv3_A 4 SLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGV---------DCKSSGTFTPSSSSSYKNLG-- 71 (339)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTC---------CTTTTCCBCGGGCTTCEEEE--
T ss_pred eeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCC---------CCCCCCcCCCccCcceeeCC--
Confidence 4566555 568999999999999999999999999999953 33221 13356899999999999864
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEe
Q 015211 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (411)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (411)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+....+ .+||||
T Consensus 72 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~GilG 119 (339)
T 3fv3_A 72 ----------------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQGILG 119 (339)
T ss_dssp ----------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSCEEE
T ss_pred ----------------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------CceeEE
Confidence 8999999996 78999999999999975 678999999998753 489999
Q ss_pred cCCCCCC----------------hHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEE
Q 015211 249 LGLGEIS----------------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYI 308 (411)
Q Consensus 249 Lg~~~~s----------------~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~ 308 (411)
||++..+ ++.+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.
T Consensus 120 Lg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~ 198 (339)
T 3fv3_A 120 IGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS-QALT 198 (339)
T ss_dssp CSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS-SSCE
T ss_pred ecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC-ccEE
Confidence 9998653 68899999999 69999999875 47999999999987 567777777665 6999
Q ss_pred EeeeeeEeCCeeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEe
Q 015211 309 IGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMF 388 (411)
Q Consensus 309 v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f 388 (411)
|++++|+|+++.+. ....+||||||++++||+++|++|.+++...........+ -|.++|.. ..+|+|+|+|
T Consensus 199 v~l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~~~~------~~~~~C~~-~~~p~i~f~f 270 (339)
T 3fv3_A 199 ISLASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQY------LYFIDCNT-DTSGTTVFNF 270 (339)
T ss_dssp EEEEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEETTEE------EEEECTTC-CCCSEEEEEE
T ss_pred EEEEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccccCc------eEEEecCC-CCCCcEEEEE
Confidence 99999999999886 4578999999999999999999998888644321101111 27789975 4689999999
Q ss_pred CCCcEEEEeCCeEEEEe
Q 015211 389 PQNNSFVVNNPVFVIYG 405 (411)
Q Consensus 389 ~gg~~~~i~~~~yi~~~ 405 (411)
.+|++++|++++|+++.
T Consensus 271 ~~g~~~~v~~~~~~~~~ 287 (339)
T 3fv3_A 271 GNGAKITVPNTEYVYQN 287 (339)
T ss_dssp TTSCEEEEEGGGGEEEC
T ss_pred CCCCEEEECHHHheeeC
Confidence 66899999999999985
No 22
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1e-45 Score=362.42 Aligned_cols=265 Identities=23% Similarity=0.374 Sum_probs=218.4
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC---CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD---CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~---C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 168 (411)
.+++.+. +..|+++|.||||||++.|++||||+++||+|. |..|.... ....|..++.|||++|+|++...
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~---~~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 3pvk_A 4 PVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQ---TADFCKQKGTYDPSGSSASQDLN-- 77 (342)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTC---CTTGGGTTCCBCGGGCTTCEEEE--
T ss_pred ceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCccccccc---ccCCCCCCCcCCCccCcceeecC--
Confidence 4555554 678999999999999999999999999999974 55553221 11235578999999999999864
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEe
Q 015211 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (411)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (411)
|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+.... ..+||||
T Consensus 78 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilG 125 (342)
T 3pvk_A 78 ----------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILG 125 (342)
T ss_dssp ----------------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEE
T ss_pred ----------------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEE
Confidence 8999999997 67999999999999975 67899999998764 4599999
Q ss_pred cCCCC-------CChHHHHHhcCCC-cceeEEeecCC--CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeC
Q 015211 249 LGLGE-------ISVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIG 317 (411)
Q Consensus 249 Lg~~~-------~s~~~~l~~~~~i-~~~FS~cL~~~--~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vg 317 (411)
||++. .+++.+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+|+
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD-RELRISLGSVEVS 204 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEET
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc-ceEEEEEeEEEEC
Confidence 99987 3688999999999 69999999874 46999999999987 567777777665 6999999999999
Q ss_pred CeeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEe
Q 015211 318 SSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVN 397 (411)
Q Consensus 318 g~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~ 397 (411)
++.+......+||||||++++||+++|++|.++|....... .. ...+|.++|.. .|+|+|+|.+|.+++||
T Consensus 205 g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~----~~--~~~~~~~~C~~---~p~i~f~f~~g~~~~vp 275 (342)
T 3pvk_A 205 GKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQD----SN--GNSFYEVDCNL---SGDVVFNFSKNAKISVP 275 (342)
T ss_dssp TEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEEC----TT--SCEEEEECSCC---CSEEEEEESTTCEEEEE
T ss_pred CEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeeccc----CC--CceEEEEecCC---CCceEEEECCCCEEEEc
Confidence 99987556899999999999999999998887775433211 10 12358889974 49999999668999999
Q ss_pred CCeEEEE
Q 015211 398 NPVFVIY 404 (411)
Q Consensus 398 ~~~yi~~ 404 (411)
+++|+++
T Consensus 276 ~~~~~~~ 282 (342)
T 3pvk_A 276 ASEFAAS 282 (342)
T ss_dssp GGGGEEC
T ss_pred HHHheee
Confidence 9999987
No 23
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=7e-46 Score=361.89 Aligned_cols=265 Identities=16% Similarity=0.183 Sum_probs=218.6
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.+++.|+.+..|+++|.|| ||+|.|++||||+++||+|. .|....|. +..++.|||++| |++..
T Consensus 8 ~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-----~~~~~~y~~~~S-T~~~~------ 71 (330)
T 1yg9_A 8 YKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ--ECVGGACV-----CPNLQKYEKLKP-KYISD------ 71 (330)
T ss_dssp CSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT--TCCSGGGG-----STTCCCCCCSSC-EEEEE------
T ss_pred EeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC--CCCCccCc-----ccccCccCCCCC-ceEEC------
Confidence 4567788889999999999 89999999999999999995 34322220 135689999999 99874
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
++.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+ +..+.....|||||||+
T Consensus 72 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~ 128 (330)
T 1yg9_A 72 ------------GNVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIVLADEL-SQEVCILSADVVVGIAA 128 (330)
T ss_dssp ------------EEEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEE-CTHHHHTTCSEEEECSC
T ss_pred ------------CCEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEEEEEEc-ccccccccCceEEEcCc
Confidence 38999999997 5699999999999875 6779999999987 43222236799999999
Q ss_pred CCCC-------hHHHHHhcCCCcceeEEeecCC--C--CceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCe
Q 015211 252 GEIS-------VPSLLAKAGLIRNSFSMCFDKD--D--SGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSS 319 (411)
Q Consensus 252 ~~~s-------~~~~l~~~~~i~~~FS~cL~~~--~--~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~ 319 (411)
+.++ ++.+|++||+++++||+||.+. . .|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+|+++
T Consensus 129 ~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~ 207 (330)
T 1yg9_A 129 PGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD-DSWKFRLDGVKIGDT 207 (330)
T ss_dssp TTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT-TSCCEECSEEEETTE
T ss_pred chhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC-CEEEEEeCeEEECCE
Confidence 8877 6778999998899999999875 2 7999999999987 568888888754 899999999999999
Q ss_pred eeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceE-eecCCCCCCCCeEEEEeCCCcEEEEeC
Q 015211 320 CLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCY-KSSSQRLPKLPSVKLMFPQNNSFVVNN 398 (411)
Q Consensus 320 ~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy-~~~~~~~~~~P~i~f~f~gg~~~~i~~ 398 (411)
.+......+||||||++++||+++|++|.+++... ....+ . ..| .++|.....+|+|+|+| ||++++|++
T Consensus 208 ~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~----~~~~g--~--~~~~~~~C~~~~~~p~i~f~f-gg~~~~l~~ 278 (330)
T 1yg9_A 208 TVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCV----VEKTT--T--RRICKLDCSKIPSLPDVTFVI-NGRNFNISS 278 (330)
T ss_dssp EEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCE----EEECS--S--CEEEEECGGGGGGSCCEEEEE-TTEEEEECH
T ss_pred EEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCc----ccCCC--c--eEEEEEECCCccccCcEEEEE-CCEEEEECH
Confidence 87656789999999999999999999998877432 21111 1 136 78998767899999999 899999999
Q ss_pred CeEEEEe
Q 015211 399 PVFVIYG 405 (411)
Q Consensus 399 ~~yi~~~ 405 (411)
++|+++.
T Consensus 279 ~~y~~~~ 285 (330)
T 1yg9_A 279 QYYIQQN 285 (330)
T ss_dssp HHHEEEE
T ss_pred HHhcccC
Confidence 9999886
No 24
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.2e-45 Score=371.25 Aligned_cols=263 Identities=16% Similarity=0.252 Sum_probs=219.3
Q ss_pred CCceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCC
Q 015211 89 GSKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (411)
Q Consensus 89 ~~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 168 (411)
....++|.|+.+..|+++|.||||||++.|++||||+++||+|. .|.... |..++.|||++|+|++..
T Consensus 125 ~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~--~C~s~~-------C~~~~~ydps~SsT~~~~--- 192 (451)
T 3qvc_A 125 EFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI--KCTSES-------CESKNHYDSSKSKTYEKD--- 192 (451)
T ss_dssp --CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT--TCCSGG-------GTTSCCBCGGGCTTCEEE---
T ss_pred cCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCccc-------cCCCCCCCCCCCcccccC---
Confidence 34567899999999999999999999999999999999999995 443322 335689999999999984
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEee----ccCCCCCCCCCc
Q 015211 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMK----QSGGYLDGVAPD 244 (411)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~d 244 (411)
+|.|.+.|++| ++.|.+++|+|+|++. .++ +.|||+.. +.+ + .....|
T Consensus 193 ---------------~~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f-~~~~~d 244 (451)
T 3qvc_A 193 ---------------DTPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-Y-SESDVD 244 (451)
T ss_dssp ---------------EEEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-H-HHSCCC
T ss_pred ---------------CCEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-c-cCCCCC
Confidence 48999999997 4999999999999875 566 99999998 665 3 223679
Q ss_pred eEEecCCCCCC------hHHHHHhcCCC-cceeEEeecCCC--CceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeee
Q 015211 245 GLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD--SGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETC 314 (411)
Q Consensus 245 GIlGLg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~~--~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i 314 (411)
||||||++.++ ++.+|++||+| +++||+||.+.. +|.|+||++|+.+ .+.+.|+|+... .+|.|.++ |
T Consensus 245 GILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~-~~w~v~l~-I 322 (451)
T 3qvc_A 245 GVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD-LMWQVDLD-V 322 (451)
T ss_dssp EEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST-TSSEEEEE-E
T ss_pred EEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC-CeeEEEEE-E
Confidence 99999998654 57889999999 699999999853 7999999999987 578888888764 89999999 9
Q ss_pred EeCCeeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEE
Q 015211 315 CIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSF 394 (411)
Q Consensus 315 ~vgg~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~ 394 (411)
+||++ ......+||||||++++||+++|++|.+++ ++.... ...+|.++|. ...+|+|+|+| ||.++
T Consensus 323 ~Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i----~a~~~~-----~~g~y~v~C~-~~~~P~itf~f-gg~~i 389 (451)
T 3qvc_A 323 HFGNV--SSKKANVILDSATSVITVPTEFFNQFVESA----SVFKVP-----FLSLYVTTCG-NTKLPTLEYRS-PNKVY 389 (451)
T ss_dssp EETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTT----TCEECT-----TSSCEEEETT-CTTCCCEEEEE-TTEEE
T ss_pred EECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHc----CCeecC-----CCCeEEeeCC-cCcCCcEEEEE-CCEEE
Confidence 99998 335778999999999999999988887655 332221 1124889998 77899999999 79999
Q ss_pred EEeCCeEEEEec
Q 015211 395 VVNNPVFVIYGT 406 (411)
Q Consensus 395 ~i~~~~yi~~~~ 406 (411)
+||+++|+++..
T Consensus 390 ~lp~~~yi~~~~ 401 (451)
T 3qvc_A 390 TLEPKQYLEPLE 401 (451)
T ss_dssp EECHHHHEEECT
T ss_pred EEcHHHheeecc
Confidence 999999999865
No 25
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.8e-45 Score=356.03 Aligned_cols=257 Identities=19% Similarity=0.284 Sum_probs=209.0
Q ss_pred CCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 015211 98 DFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (411)
Q Consensus 98 ~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 176 (411)
..+..|+++|.|| +|+|.|++||||+++||+|. |..|. |..++.|||++|+ ++.
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~----------c~~~~~y~~~~Ss-~~~------------ 65 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSE----------QTGHDLYTPSSSA-TKL------------ 65 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHH----------HTTSCCCBCCSSC-EEC------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccc----------cCCCCCCCchhcC-Ccc------------
Confidence 3577999999999 89999999999999999996 76553 3356899999998 443
Q ss_pred CCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC-
Q 015211 177 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 255 (411)
Q Consensus 177 ~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s- 255 (411)
++|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||+..+.+.+......|||||||++.++
T Consensus 66 ------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 130 (325)
T 1ibq_A 66 ------SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINT 130 (325)
T ss_dssp ------TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCC
T ss_pred ------CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCcccccc
Confidence 359999999997 56899999999999875 67899999999887765544467999999998665
Q ss_pred --------hHHHHHhcCCCcceeEEeecCCCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeeccCcc
Q 015211 256 --------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSF 326 (411)
Q Consensus 256 --------~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~ 326 (411)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|++++|+||++.+....+
T Consensus 131 ~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~ 209 (325)
T 1ibq_A 131 VQPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGF 209 (325)
T ss_dssp CBSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCE
T ss_pred cCcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCc
Confidence 35788876 337999999998778999999999876 45667777653347999999999999988865678
Q ss_pred cEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEec
Q 015211 327 KAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGT 406 (411)
Q Consensus 327 ~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~~ 406 (411)
.+||||||++++||+++|++|.++|.. +....... -|.++|. ..+|+|+|+| ||++++||+++|+++..
T Consensus 210 ~aiiDSGTt~~~lP~~~~~~i~~~i~~---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~~ 278 (325)
T 1ibq_A 210 SAIADTGTTLILLDDEIVSAYYEQVSG---AQESYEAG-----GYVFSCS--TDLPDFTVVI-GDYKAVVPGKYINYAPV 278 (325)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTSTT---CBCCSSSS-----SCEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEES
T ss_pred eEEEeCCCCcEeCCHHHHHHHHHhCCC---ceEcCcCC-----eEEEEcC--CCCCcEEEEE-CCEEEEECHHHhccccc
Confidence 999999999999999998888766532 22111111 1667887 4789999999 89999999999998753
No 26
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-45 Score=361.14 Aligned_cols=272 Identities=21% Similarity=0.273 Sum_probs=212.3
Q ss_pred eecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCC
Q 015211 94 SLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLC 172 (411)
Q Consensus 94 ~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C 172 (411)
+|.+..+..||++|.||||||+|.|+|||||+++||+|. |..| ++.|||++|+|++...
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~~------ 65 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSKG------ 65 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEEE------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeCC------
Confidence 455666789999999999999999999999999999995 5443 3789999999999864
Q ss_pred CCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCC
Q 015211 173 DLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLG 252 (411)
Q Consensus 173 ~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~ 252 (411)
|.|.+.|++| ++.|.+++|+|+|++.. .....+.|+|.....+.+......|||||||++
T Consensus 66 ------------~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~ 125 (383)
T 2ewy_A 66 ------------FDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYA 125 (383)
T ss_dssp ------------EEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCG
T ss_pred ------------ceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCch
Confidence 8999999997 57999999999998631 122256789887666655444467999999998
Q ss_pred CCC--------hHHHHHhcCCCcceeEEeecC---------CCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeee
Q 015211 253 EIS--------VPSLLAKAGLIRNSFSMCFDK---------DDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETC 314 (411)
Q Consensus 253 ~~s--------~~~~l~~~~~i~~~FS~cL~~---------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i 314 (411)
.++ +..+|++|+.++++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|+|.+++|
T Consensus 126 ~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i 204 (383)
T 2ewy_A 126 TLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE-WYYQIEILKL 204 (383)
T ss_dssp GGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB-TTBBCCEEEE
T ss_pred hcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC-ceEEEEEEEE
Confidence 765 345788888888899999963 247999999999876 567778777654 7999999999
Q ss_pred EeCCeeecc--C---cccEEEecCCcccccCHHHHHHHHHHHHHhccccccccc--CCCccceEeecCCCCCCCCeEEEE
Q 015211 315 CIGSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLM 387 (411)
Q Consensus 315 ~vgg~~~~~--~---~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~ 387 (411)
+||++.+.. . ...+||||||++++||+++|++|.++|...........+ ......|+..+......+|+|+|+
T Consensus 205 ~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~ 284 (383)
T 2ewy_A 205 EIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSETPWSYFPKISIY 284 (383)
T ss_dssp EETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSSCGGGGSCCEEEE
T ss_pred EECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCcccHhhCCcEEEE
Confidence 999998752 1 467999999999999999999999999876543221111 012345665543323468999999
Q ss_pred eCCC-----cEEEEeCCeEEEEec
Q 015211 388 FPQN-----NSFVVNNPVFVIYGT 406 (411)
Q Consensus 388 f~gg-----~~~~i~~~~yi~~~~ 406 (411)
|.|+ .+++|++++|+++..
T Consensus 285 f~g~~~~~~~~~~l~~~~yi~~~~ 308 (383)
T 2ewy_A 285 LRDENSSRSFRITILPQLYIQPMM 308 (383)
T ss_dssp EECSSTTEEEEEEECHHHHEEEEC
T ss_pred ECCCCCCceEEEEEChHHheeecc
Confidence 9654 379999999998864
No 27
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=3e-44 Score=358.76 Aligned_cols=270 Identities=19% Similarity=0.206 Sum_probs=211.1
Q ss_pred ecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCC
Q 015211 95 LGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCD 173 (411)
Q Consensus 95 l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~ 173 (411)
+.+..+..|+++|.||||+|+|.|+|||||+++||+|. |..| ++.|||++|+|++...
T Consensus 15 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~~------- 73 (395)
T 2qp8_A 15 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDLR------- 73 (395)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEEE-------
T ss_pred cCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeCC-------
Confidence 33445778999999999999999999999999999995 5333 4789999999999864
Q ss_pred CCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeec-CCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCC
Q 015211 174 LGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS-GGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLG 252 (411)
Q Consensus 174 ~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~-~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~ 252 (411)
|.|.+.|++| ++.|.+++|+|+|++ . .....+.|+|.....+.|......|||||||++
T Consensus 74 -----------~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~-------~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~ 133 (395)
T 2qp8_A 74 -----------KGVYVPYTQG--KWEGELGTDLVSIPHGP-------NVTVRANIAAITESDKFFINGSNWEGILGLAYA 133 (395)
T ss_dssp -----------EEEEEECSSC--EEEEEEEEEEEECTTSC-------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCG
T ss_pred -----------ceEEEEECCc--EEEEEEEeEEEEECCCC-------CceEEEEEEEEEccCcccccccCccceEEcCch
Confidence 8999999997 568999999999984 2 122246788887665554433467999999998
Q ss_pred CCC--------hHHHHHhcCCCcceeEEeecC------------CCCceEEEccCCCCC-ceEeeeeecCCCceeEEEee
Q 015211 253 EIS--------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGV 311 (411)
Q Consensus 253 ~~s--------~~~~l~~~~~i~~~FS~cL~~------------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l 311 (411)
.++ ++.+|++|++++++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.|
T Consensus 134 ~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l 212 (395)
T 2qp8_A 134 EIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVII 212 (395)
T ss_dssp GGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCE
T ss_pred hhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC-ceEEEEE
Confidence 764 456899999998899999974 257999999999876 567888887654 7999999
Q ss_pred eeeEeCCeeecc-----CcccEEEecCCcccccCHHHHHHHHHHHHHhccccccccc--CCCccceEeecCCCCCCCCeE
Q 015211 312 ETCCIGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSV 384 (411)
Q Consensus 312 ~~i~vgg~~~~~-----~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i 384 (411)
++|+||++.+.. ....+||||||++++||+++|++|.++|............ ......|+..+......+|+|
T Consensus 213 ~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i 292 (395)
T 2qp8_A 213 VRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVI 292 (395)
T ss_dssp EEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCE
T ss_pred EEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccccchHhhCCcE
Confidence 999999998752 1357999999999999999999999999876543211111 011235765443333368999
Q ss_pred EEEeCCCc-----EEEEeCCeEEEEec
Q 015211 385 KLMFPQNN-----SFVVNNPVFVIYGT 406 (411)
Q Consensus 385 ~f~f~gg~-----~~~i~~~~yi~~~~ 406 (411)
+|+|.|+. +++|++++|+++..
T Consensus 293 ~f~f~g~~~~~~~~~~l~p~~yi~~~~ 319 (395)
T 2qp8_A 293 SLYLMGEVTNQSFRITILPQQYLRPVE 319 (395)
T ss_dssp EEEEECSSTTEEEEEEECHHHHEEEEC
T ss_pred EEEEccCCCCceEEEEECHHHhEeecc
Confidence 99996553 79999999999864
No 28
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-44 Score=352.31 Aligned_cols=254 Identities=18% Similarity=0.261 Sum_probs=207.7
Q ss_pred CCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 015211 99 FGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 177 (411)
Q Consensus 99 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 177 (411)
.+..|+++|.|| ||+|.|++||||+++||+|. |..|. |..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~----------c~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE----------RSGHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH----------HTTCCCBCCCTTC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc----------ccCCCCCCccccC-Ccc-------------
Confidence 567999999999 89999999999999999996 66553 3356899999998 543
Q ss_pred CCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC--
Q 015211 178 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 255 (411)
Q Consensus 178 C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s-- 255 (411)
++|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......|||||||++.++
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 -----DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred -----CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCccccccc
Confidence 259999999997 56899999999999875 67899999999887655433467999999998655
Q ss_pred -------hHHHHHhcCCCcceeEEeecCCCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeeccCccc
Q 015211 256 -------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 327 (411)
Q Consensus 256 -------~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~ 327 (411)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|++++|+||+ .+....+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECCCEE
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCCCce
Confidence 35678876 337999999998778999999999987 567888887544479999999999999 66656789
Q ss_pred EEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEe
Q 015211 328 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYG 405 (411)
Q Consensus 328 ~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~ 405 (411)
+||||||++++||+++|++|.++|.. +...... .-|.++|. ..+|+|+|+| ||++++||+++|+++.
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~~~-----g~~~~~C~--~~~P~i~f~f-gg~~~~i~~~~~~~~~ 277 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQ-----GGYVFPSS--ASLPDFSVTI-GDYTATVPGEYISFAD 277 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTSTT---CEEETTT-----TEEEEETT--CCCCCEEEEE-TTEEEEECHHHHEEEE
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCCC---cEEcCcC-----CEEEEECC--CCCceEEEEE-CCEEEecCHHHeEEec
Confidence 99999999999999998887765532 2211111 12778897 4789999999 8999999999999875
No 29
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=1.9e-44 Score=336.05 Aligned_cols=224 Identities=25% Similarity=0.393 Sum_probs=187.7
Q ss_pred CceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCC
Q 015211 90 SKTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCS 168 (411)
Q Consensus 90 ~~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~ 168 (411)
+..++|.|+.+.+|+++|.||||||+|.|+|||||+++||+|. |..| .. |..++.|||++|+|++...
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~--~~-------C~~~~~y~~~~SsT~~~~~-- 70 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINS--KA-------CRAHSMYESSDSSTYKENG-- 70 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSC--HH-------HHTSCCBCGGGCTTCEEEE--
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCC--cc-------cCCCCCCCCccCCCeeeCC--
Confidence 4568899999999999999999999999999999999999995 5421 11 3346889999999999854
Q ss_pred CCCCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEe
Q 015211 169 HRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIG 248 (411)
Q Consensus 169 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlG 248 (411)
|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+..+.+..+.....|||||
T Consensus 71 ----------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~GilG 124 (239)
T 1b5f_A 71 ----------------TFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDGILG 124 (239)
T ss_dssp ----------------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCEEEE
T ss_pred ----------------cEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcceEEe
Confidence 8999999997 5899999999999875 6779999999987653333346799999
Q ss_pred cCCCCCChH--HHHHhcCCC-cceeEEeecCC----CCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCee
Q 015211 249 LGLGEISVP--SLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSC 320 (411)
Q Consensus 249 Lg~~~~s~~--~~l~~~~~i-~~~FS~cL~~~----~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~ 320 (411)
||++.++.| .+|++|++| +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+|+++.
T Consensus 125 Lg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~ 203 (239)
T 1b5f_A 125 LSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ-YYWQFGIGDVLIGDKS 203 (239)
T ss_dssp CSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE-TTEEEEECCEEETTEE
T ss_pred cCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC-CeEEEEeeEEEECCEE
Confidence 999998854 458999998 69999999873 47999999999877 456777776543 7999999999999987
Q ss_pred ec--cCcccEEEecCCcccccCHHHHHHHHHHH
Q 015211 321 LK--QTSFKAIVDSGSSFTFLPKEVYETIAAEF 351 (411)
Q Consensus 321 ~~--~~~~~~iiDSGTs~t~lp~~~y~~l~~~i 351 (411)
+. .....+||||||++++||+++|++|.++|
T Consensus 204 ~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~i 236 (239)
T 1b5f_A 204 TGFCAPGCQAFADSGTSLLSGPTAIVTQINHAI 236 (239)
T ss_dssp CCTTTTCEEEEECTTCSSEEECHHHHHHHHHHT
T ss_pred ecccCCCCEEEEecCcchhhCCHHHHHHHHHHh
Confidence 64 35678999999999999999988887665
No 30
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=1.9e-44 Score=358.47 Aligned_cols=277 Identities=17% Similarity=0.329 Sum_probs=204.8
Q ss_pred eeec-CCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 93 MSLG-NDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 93 ~~l~-~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
+|+. ++.+.+||++|.|||| |+|||||+++||+|. .|. +++.++|++..
T Consensus 5 ~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~--~~~-----------------------~~~~~~C~s~~ 54 (381)
T 1t6e_X 5 APVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD--GGQ-----------------------PPAEIPCSSPT 54 (381)
T ss_dssp EEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC--TTC-----------------------CCCCCBTTSHH
T ss_pred EeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC--CCC-----------------------CCCccCCCCch
Confidence 4454 7778899999999998 999999999999994 221 12334444444
Q ss_pred CCC-----CCCCCC-------CCCCC-ceeeeeCCCCceeeeeEEEEEEEeecCCCCccccccccc----EEEEeEeecc
Q 015211 172 CDL-----GTSCQN-------PKQPC-PYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQAS----VIIGCGMKQS 234 (411)
Q Consensus 172 C~~-----~~~C~~-------~~~~c-~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~----~~fG~~~~~~ 234 (411)
|.. ...|.. ..+.| .|.+.|++| +.+.|.+++|+|+|++.++. ..+++ +.|||+..+.
T Consensus 55 C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~~~~~Fg~~~~~~ 129 (381)
T 1t6e_X 55 CLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVNVGVLAACAPSKL 129 (381)
T ss_dssp HHHHHSSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEEEEEEEEECCGGG
T ss_pred hccccCCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----ccccceeeeeEeecCcccc
Confidence 432 113332 11347 599999997 56799999999999864322 13333 4679998863
Q ss_pred CCCCCCCCCceEEecCCCCCChHHHHHhcCCCcceeEEeecCCCCceEEEccCCCC---Cc---eEeeeeecCCCceeEE
Q 015211 235 GGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPA---TQ---QSTSFLASNGKYITYI 308 (411)
Q Consensus 235 g~~~~~~~~dGIlGLg~~~~s~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~---~~---~~~p~v~~~~~~~~y~ 308 (411)
+..+ ....|||||||++.+|++.||+++++++++||+||.++.+|.|+||+.+.. +. .++|++..+.. .+|.
T Consensus 130 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~ 207 (381)
T 1t6e_X 130 LASL-PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHY 207 (381)
T ss_dssp GTTS-CTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCE
T ss_pred cCCC-CCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceE
Confidence 2222 236799999999999999999999877999999999877899999998764 22 35555443222 4677
Q ss_pred EeeeeeEeCCeeecc--C---cccEEEecCCcccccCHHHHHHHHHHHHHhccc--------ccccccCCCccceEeecC
Q 015211 309 IGVETCCIGSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND--------TITSFEGYPWKCCYKSSS 375 (411)
Q Consensus 309 v~l~~i~vgg~~~~~--~---~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~--------~~~~~~~~~~~~Cy~~~~ 375 (411)
|+|++|+||++.+.. . ...+||||||++++||+++|++|.++|.+++.. .+.......++.||..++
T Consensus 208 v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~ 287 (381)
T 1t6e_X 208 ISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKT 287 (381)
T ss_dssp ECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGG
T ss_pred EEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCC
Confidence 999999999998752 2 246999999999999999999999999887742 111012245689999876
Q ss_pred CC----CCCCCeEEEEeCCCcEEEEeCCeEEEEec
Q 015211 376 QR----LPKLPSVKLMFPQNNSFVVNNPVFVIYGT 406 (411)
Q Consensus 376 ~~----~~~~P~i~f~f~gg~~~~i~~~~yi~~~~ 406 (411)
.. ...+|+|+|+|+||++|+|++++|+++.+
T Consensus 288 ~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~ 322 (381)
T 1t6e_X 288 LGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK 322 (381)
T ss_dssp CCEETTEECCCCEEEEETTSCEEEECHHHHEEEEE
T ss_pred CcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcC
Confidence 42 13689999999767999999999998854
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5.9e-44 Score=362.85 Aligned_cols=272 Identities=19% Similarity=0.210 Sum_probs=215.2
Q ss_pred ecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCC
Q 015211 95 LGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCD 173 (411)
Q Consensus 95 l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~ 173 (411)
+.+..+..||++|.||||||+|.|+|||||+++||+|. | |. .++.|||++|+||+...
T Consensus 68 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~------------~~~~y~~~~SsT~~~~~------- 126 (455)
T 3lpj_A 68 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR------- 126 (455)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE-------
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc------------cCCcccCCCCCCcccCC-------
Confidence 33455679999999999999999999999999999995 4 32 35789999999999864
Q ss_pred CCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCC
Q 015211 174 LGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGE 253 (411)
Q Consensus 174 ~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~ 253 (411)
|.|.+.|++| ++.|.+++|+|+|++.. .+...+.|+|+....+.+......|||||||++.
T Consensus 127 -----------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~ 187 (455)
T 3lpj_A 127 -----------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAE 187 (455)
T ss_dssp -----------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred -----------ccEEEEeCCe--EEEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccccCCCcceEEEeCccc
Confidence 8999999998 56999999999998531 1223567899888776665545779999999986
Q ss_pred CC--------hHHHHHhcCCCcceeEEeecC------------CCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeee
Q 015211 254 IS--------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVE 312 (411)
Q Consensus 254 ~s--------~~~~l~~~~~i~~~FS~cL~~------------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~ 312 (411)
++ ++.+|++|++|.++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.++
T Consensus 188 ~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~ 266 (455)
T 3lpj_A 188 IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIV 266 (455)
T ss_dssp GCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEE
T ss_pred cccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC-ceeEEEEe
Confidence 54 466899999998899999964 347999999999987 577888887764 79999999
Q ss_pred eeEeCCeeecc-----CcccEEEecCCcccccCHHHHHHHHHHHHHhccccccccc--CCCccceEeecCCCCCCCCeEE
Q 015211 313 TCCIGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVK 385 (411)
Q Consensus 313 ~i~vgg~~~~~-----~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~ 385 (411)
+|+||++.+.. ....+||||||++++||+++|++|.++|............ ...+..|+.........+|+|+
T Consensus 267 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~~~~~~~P~i~ 346 (455)
T 3lpj_A 267 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVIS 346 (455)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTCCCGGGSCCEE
T ss_pred EEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccCCchhcCCcEE
Confidence 99999998753 2467999999999999999999999999887543222111 1123456654432233589999
Q ss_pred EEeCCCc-----EEEEeCCeEEEEecc
Q 015211 386 LMFPQNN-----SFVVNNPVFVIYGTQ 407 (411)
Q Consensus 386 f~f~gg~-----~~~i~~~~yi~~~~~ 407 (411)
|+|.|+. +++|++++|+++..+
T Consensus 347 f~f~g~~~~~~~~~~l~~~~yi~~~~~ 373 (455)
T 3lpj_A 347 LYLMGEVTNQSFRITILPQQYLRPVED 373 (455)
T ss_dssp EEEECSSTTEEEEEEECHHHHEEEECC
T ss_pred EEEcCCCcCceEEEEECHHHheEeccC
Confidence 9996443 599999999998654
No 32
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.9e-43 Score=353.77 Aligned_cols=269 Identities=19% Similarity=0.208 Sum_probs=211.4
Q ss_pred CCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCC
Q 015211 98 DFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGT 176 (411)
Q Consensus 98 ~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~ 176 (411)
..+..||++|.||||||+|.|+|||||+++||+|. | |. .++.|||++|+|++...
T Consensus 25 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~~---------- 80 (402)
T 3vf3_A 25 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDLR---------- 80 (402)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccCC----------
Confidence 34568999999999999999999999999999995 4 21 35789999999999864
Q ss_pred CCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC-
Q 015211 177 SCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS- 255 (411)
Q Consensus 177 ~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s- 255 (411)
|.|.+.|++| ++.|.+++|+|+|++.. .....+.|+|.....+.+......|||||||++.++
T Consensus 81 --------~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 81 --------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp --------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred --------CEEEEEECcE--EEEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcc
Confidence 8999999998 57999999999998531 122245688887776665544577999999998654
Q ss_pred -------hHHHHHhcCCCcceeEEeecC------------CCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeE
Q 015211 256 -------VPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCC 315 (411)
Q Consensus 256 -------~~~~l~~~~~i~~~FS~cL~~------------~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~ 315 (411)
++.+|++|++|+++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.+++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB-TTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC-cEEEEEEeEEE
Confidence 466899999998899999963 247999999999987 567888887764 79999999999
Q ss_pred eCCeeecc-----CcccEEEecCCcccccCHHHHHHHHHHHHHhccccccccc--CCCccceEeecCCCCCCCCeEEEEe
Q 015211 316 IGSSCLKQ-----TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE--GYPWKCCYKSSSQRLPKLPSVKLMF 388 (411)
Q Consensus 316 vgg~~~~~-----~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~--~~~~~~Cy~~~~~~~~~~P~i~f~f 388 (411)
||++.+.. ....+||||||++++||+++|++|.++|............ ...+..|+.........+|+|+|+|
T Consensus 224 v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f 303 (402)
T 3vf3_A 224 INGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGTTPWNIFPVISLYL 303 (402)
T ss_dssp ETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTCCCGGGSCCEEEEE
T ss_pred ECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccccchHhhCCceEEEE
Confidence 99998753 2467999999999999999999999999887542221111 1123467665433333689999999
Q ss_pred CCCc-----EEEEeCCeEEEEecc
Q 015211 389 PQNN-----SFVVNNPVFVIYGTQ 407 (411)
Q Consensus 389 ~gg~-----~~~i~~~~yi~~~~~ 407 (411)
.|+. +++|++++|+++..+
T Consensus 304 ~g~~~~~~~~~~l~~~~yi~~~~~ 327 (402)
T 3vf3_A 304 MGEVTNQSFRITILPQQYLRPVED 327 (402)
T ss_dssp ECSSTTEEEEEEECHHHHEEECCC
T ss_pred ecCCCCceEEEEECHHHheehhcc
Confidence 6543 599999999998654
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2e-44 Score=350.62 Aligned_cols=254 Identities=18% Similarity=0.265 Sum_probs=205.9
Q ss_pred CCceEEEEEEeCCCCeEEEEEEEcCCCceEEecC-CCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCCCCCCCC
Q 015211 99 FGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCD-CVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRLCDLGTS 177 (411)
Q Consensus 99 ~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~ 177 (411)
.+..|+++|.|| ||+|.|++||||+++||+|. |..|. |..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~----------c~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQ----------QSGHSVYNPSATG-KEL------------- 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH----------HTTSCCBCHHHHC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchh----------ccCCCCCCcccCC-ccc-------------
Confidence 577999999999 89999999999999999996 66553 3357899999998 553
Q ss_pred CCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC--
Q 015211 178 CQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS-- 255 (411)
Q Consensus 178 C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s-- 255 (411)
++|.|.+.|++| +.+.|.+++|+|+|++. .++++.|||++.+.+.+......|||||||++.++
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 -----SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCC
T ss_pred -----CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCccccccc
Confidence 259999999997 56899999999999875 67899999999887765544467999999997654
Q ss_pred -------hHHHHHhcCCCcceeEEeecCCCCceEEEccCCCCC-ceEeeeeecCCCceeEEEeeeeeEeCCeeeccCccc
Q 015211 256 -------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT-QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFK 327 (411)
Q Consensus 256 -------~~~~l~~~~~i~~~FS~cL~~~~~G~l~fG~~d~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~ 327 (411)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|++++|+||+ +....+.
T Consensus 133 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~ 209 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFS 209 (323)
T ss_dssp BSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EEEEEEE
T ss_pred ccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--ccCCCce
Confidence 45678876 337999999998778999999999876 566777776533479999999999999 4446788
Q ss_pred EEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEec
Q 015211 328 AIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGT 406 (411)
Q Consensus 328 ~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~~ 406 (411)
+||||||++++||+++|++|.++|.. +....... -|.++|. ..+|+|+|+| ||++++||+++|+++..
T Consensus 210 aiiDSGTs~~~lP~~~~~~l~~~i~~---a~~~~~~g-----~~~~~C~--~~~P~i~f~f-gg~~~~l~~~~~~~~~~ 277 (323)
T 1bxo_A 210 GIADTGTTLLLLDDSVVSQYYSQVSG---AQQDSNAG-----GYVFDCS--TNLPDFSVSI-SGYTATVPGSLINYGPS 277 (323)
T ss_dssp EEECTTCSSEEECHHHHHHHHTTSTT---CEEETTTT-----EEEECTT--CCCCCEEEEE-TTEEEEECHHHHEEEEC
T ss_pred EEEeCCCCceeCCHHHHHHHHHhCCC---ceEcCcCC-----EEEEECC--CCCceEEEEE-CCEEEEECHHHeEEecc
Confidence 99999999999999998888766532 22111111 1778898 4789999999 89999999999998753
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=1.6e-43 Score=346.55 Aligned_cols=249 Identities=18% Similarity=0.307 Sum_probs=204.1
Q ss_pred eeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCCC
Q 015211 92 TMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHRL 171 (411)
Q Consensus 92 ~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~~ 171 (411)
.++|.|+ +..|+++|.||||+|+|.|+|||||+++||+| .+.|+|++|+++.
T Consensus 4 ~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~-------------------~~~y~~s~Ss~~~-------- 55 (340)
T 1wkr_A 4 SVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGA-------------------DKSYVKTSTSSAT-------- 55 (340)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECS-------------------SSCCCCCTTCEEE--------
T ss_pred cEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecC-------------------CCccCCcCCcccc--------
Confidence 4667776 56999999999999999999999999999998 2579998887543
Q ss_pred CCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeecCCCCcccccccccEEEEeEeeccCCCCCCCCCceEEecCC
Q 015211 172 CDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGL 251 (411)
Q Consensus 172 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~ 251 (411)
+|.|.+.|++| ++.|.+++|+|+|++. .++++.|||+....+ + ...|||||||+
T Consensus 56 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~---~~~~GilGLg~ 109 (340)
T 1wkr_A 56 ------------SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F---DGVDGILGVGP 109 (340)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C---TTCSEEEECSC
T ss_pred ------------CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C---cCCCcEEECCc
Confidence 38999999997 4899999999999875 678999999998776 3 25799999999
Q ss_pred CCCC--------------hHHHHHhcCCC-cceeEEeecCC-----CCceEEEccCCCCC-ceEeeeeecCCC---ceeE
Q 015211 252 GEIS--------------VPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPAT-QQSTSFLASNGK---YITY 307 (411)
Q Consensus 252 ~~~s--------------~~~~l~~~~~i-~~~FS~cL~~~-----~~G~l~fG~~d~~~-~~~~p~v~~~~~---~~~y 307 (411)
+.++ ++.+|++||+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... ..+|
T Consensus 110 ~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w 189 (340)
T 1wkr_A 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW 189 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSS
T ss_pred cccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceE
Confidence 7654 35679999999 69999999863 36999999999876 456666666542 4799
Q ss_pred EEeeeeeEeCC-eeeccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCCccceEeecCCCCCCCCeEEE
Q 015211 308 IIGVETCCIGS-SCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKL 386 (411)
Q Consensus 308 ~v~l~~i~vgg-~~~~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~~~~Cy~~~~~~~~~~P~i~f 386 (411)
.|. ++|+|++ +.+. ....+||||||++++||+++|++|.+++.... ... ..+|.++|.....+|+|+|
T Consensus 190 ~v~-~~i~v~~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~----~~~-----~g~~~~~C~~~~~~p~i~f 258 (340)
T 1wkr_A 190 GIN-QSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVA----DNN-----TGLLRLTTAQYANLQSLFF 258 (340)
T ss_dssp EEE-EEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEE----CTT-----TSSEEECHHHHHTCCCEEE
T ss_pred EEE-eeEEECCCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEE----cCC-----CCeEEeeccccccCCcEEE
Confidence 999 9999998 8775 45689999999999999999998876664322 111 1238889976567899999
Q ss_pred EeCCCcEEEEeCCeEEEEec
Q 015211 387 MFPQNNSFVVNNPVFVIYGT 406 (411)
Q Consensus 387 ~f~gg~~~~i~~~~yi~~~~ 406 (411)
+| +|.+++|++++|+++..
T Consensus 259 ~f-~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 259 TI-GGQTFELTANAQIWPRN 277 (340)
T ss_dssp EE-TTEEEEECTGGGBCCGG
T ss_pred EE-CCEEEEEcHHHhccccc
Confidence 99 79999999999998754
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.96 E-value=5e-28 Score=225.28 Aligned_cols=176 Identities=20% Similarity=0.311 Sum_probs=146.3
Q ss_pred cccccEEEEeEeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-cceeEEeecCCC----CceEEEccCC
Q 015211 220 SVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQG 288 (411)
Q Consensus 220 ~~~~~~~fG~~~~~~g~~~~~~~~dGIlGLg~~~~s------~~~~l~~~~~i-~~~FS~cL~~~~----~G~l~fG~~d 288 (411)
..++++.|||++.+.+.++.....|||||||++.++ +..+|++||+| +++||+||.+.. .|.|+||++|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 357899999999988866655578999999998765 45789999999 699999998752 7999999999
Q ss_pred CCC-ceEeeeeecCCCceeEEEeeeeeEeCCeee-ccCcccEEEecCCcccccCHHHHHHHHHHHHHhcccccccccCCC
Q 015211 289 PAT-QQSTSFLASNGKYITYIIGVETCCIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYP 366 (411)
Q Consensus 289 ~~~-~~~~p~v~~~~~~~~y~v~l~~i~vgg~~~-~~~~~~~iiDSGTs~t~lp~~~y~~l~~~i~~~~~~~~~~~~~~~ 366 (411)
+.+ .+.+.|+|+... .+|.|.+++|+|+++.+ ......+||||||++++||+++|++|.+++... ....+
T Consensus 83 ~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~~~g--- 154 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRK-AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAV----PLIQG--- 154 (241)
T ss_dssp GGGEEEEEEEEECSSB-TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----EEETT---
T ss_pred HHHcCCceEEEECccc-cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCe----eccCC---
Confidence 987 578888888754 89999999999999874 346788999999999999999999988776432 21112
Q ss_pred ccceEeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEecc
Q 015211 367 WKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 407 (411)
Q Consensus 367 ~~~Cy~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~~~ 407 (411)
.|.++|.....+|+|+|+| +|++++|++++|+++..+
T Consensus 155 ---~~~~~C~~~~~~p~i~f~f-~g~~~~l~~~~y~~~~~~ 191 (241)
T 1lya_B 155 ---EYMIPCEKVSTLPAITLKL-GGKGYKLSPEDYTLKVSQ 191 (241)
T ss_dssp ---EEEEEGGGGGGSCCEEEEE-TTEEEEECTTTSEEEETT
T ss_pred ---cEEEECCCCccCCeEEEEE-CCEEEEECHHHhEEEccC
Confidence 2788998767899999999 799999999999998753
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=1.1e-23 Score=167.44 Aligned_cols=94 Identities=30% Similarity=0.393 Sum_probs=79.4
Q ss_pred ceeeecCCCCceEEEEEEeCCCCeEEEEEEEcCCCceEEecCCCCCCCCccccccCCCCCCCCCCCCCCCCCccccCCCC
Q 015211 91 KTMSLGNDFGWLHYTWIDIGTPNVSFLVALDAGSDLLWIPCDCVRCAPLSASYYNSLDRDLNEYSPSASSTSKHLSCSHR 170 (411)
Q Consensus 91 ~~~~l~~~~~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~~f~p~~SsT~~~~~C~~~ 170 (411)
..++|.|+.+..|+++|.||||||+|.|+|||||+++||+|. .|.... ..|..++.|||++|+|++...
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~-----~~C~~~~~y~p~~SsT~~~~~---- 71 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI--HCKLLD-----IACWIHHKYNSDKSSTYVKNG---- 71 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCTTC-----HHHHTSCCBCGGGCTTCEEEE----
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc--CccCcc-----cccCCCCCCCchhCCCceeCC----
Confidence 457788888999999999999999999999999999999995 443210 013346899999999999864
Q ss_pred CCCCCCCCCCCCCCCceeeeeCCCCceeeeeEEEEEEEeec
Q 015211 171 LCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS 211 (411)
Q Consensus 171 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~~~~D~v~l~~ 211 (411)
|.|.+.|++| ++.|.+++|+|+|++
T Consensus 72 --------------~~~~i~Yg~G--s~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 72 --------------TSFDIHYGSG--SLSGYLSQDTVSVPC 96 (97)
T ss_dssp --------------EEEEEECSSC--EEEEEEEEEEEEESC
T ss_pred --------------CcEEEEECCc--EEEEEEEEEEEEECC
Confidence 8999999997 489999999999975
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=96.90 E-value=0.00025 Score=54.07 Aligned_cols=36 Identities=11% Similarity=0.304 Sum_probs=32.0
Q ss_pred EeecCCCCCCCCeEEEEeCCCcEEEEeCCeEEEEecc
Q 015211 371 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ 407 (411)
Q Consensus 371 y~~~~~~~~~~P~i~f~f~gg~~~~i~~~~yi~~~~~ 407 (411)
|.++|+....+|+|+|+| ||++++|++++|+++..+
T Consensus 3 y~v~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~ 38 (87)
T 1b5f_B 3 LQVDCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGK 38 (87)
T ss_dssp CEECGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESC
T ss_pred EEEECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccC
Confidence 788998777899999999 799999999999998643
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.22 E-value=0.28 Score=40.67 Aligned_cols=30 Identities=20% Similarity=0.223 Sum_probs=25.9
Q ss_pred CceEEEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 100 GWLHYTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 100 ~~~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
...+++++.|+ .+++.+++|||++.+-+..
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 34678899998 6899999999999998875
No 39
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=85.95 E-value=0.79 Score=35.75 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=23.0
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
++.|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 10 TTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 5678999 6999999999999999973
No 40
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=85.93 E-value=0.82 Score=35.28 Aligned_cols=26 Identities=31% Similarity=0.211 Sum_probs=22.9
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
+++|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 4668999 6999999999999999975
No 41
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=82.74 E-value=1.3 Score=34.18 Aligned_cols=26 Identities=23% Similarity=0.118 Sum_probs=22.9
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
+++|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 4668999 7999999999999999964
No 42
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=81.77 E-value=1.4 Score=34.77 Aligned_cols=27 Identities=22% Similarity=0.331 Sum_probs=23.2
Q ss_pred EEEEeC---CCCeEEEEEEEcCCCceEEec
Q 015211 105 TWIDIG---TPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 105 ~~i~iG---tP~q~~~v~~DTGS~~~Wv~~ 131 (411)
++|.|| +|+|.+..++|||.|++-+..
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 446666 789999999999999999986
No 43
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=77.99 E-value=2.1 Score=33.97 Aligned_cols=25 Identities=20% Similarity=0.252 Sum_probs=22.2
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
++ |.|| .|.+.+++|||.|++-+.-
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEcc
Confidence 45 8899 6999999999999999975
No 44
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=72.61 E-value=4 Score=32.21 Aligned_cols=25 Identities=16% Similarity=0.197 Sum_probs=22.4
Q ss_pred EEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 105 TWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 105 ~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
+.|.|| .|.+.+++|||.|++-+..
T Consensus 12 vti~I~--Gq~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 12 LTLWLD--DKMFTGLINTGADVTIIKL 36 (114)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEEEC--CEEEEEEEccCCCceEEec
Confidence 558898 6999999999999999976
No 45
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=66.09 E-value=5.2 Score=33.10 Aligned_cols=29 Identities=10% Similarity=0.232 Sum_probs=25.7
Q ss_pred eEEEEEEeCCCCeEEEEEEEcCCCceEEecC
Q 015211 102 LHYTWIDIGTPNVSFLVALDAGSDLLWIPCD 132 (411)
Q Consensus 102 ~y~~~i~iGtP~q~~~v~~DTGS~~~Wv~~~ 132 (411)
.+|+++.|. .+++.+++|||+..+.+...
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 678889998 69999999999999999864
No 46
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=63.38 E-value=6.7 Score=32.05 Aligned_cols=34 Identities=24% Similarity=0.281 Sum_probs=26.0
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHHHHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYET 346 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~y~~ 346 (411)
.++.|. +.|||+.+ .++||||.+.+.++++..++
T Consensus 25 ~~~~v~---v~InG~~~-----~~LvDTGAs~s~is~~~a~~ 58 (148)
T 2i1a_A 25 PMLYIN---IEINNYPV-----KAFVDTGAQTTIMSTRLAKK 58 (148)
T ss_dssp CCCEEE---EEETTEEE-----EEEECTTCSSCEEEHHHHHH
T ss_pred ceEEEE---EEECCEEE-----EEEEECCCCccccCHHHHHH
Confidence 345555 67888854 59999999999999887443
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=60.61 E-value=5.9 Score=32.77 Aligned_cols=34 Identities=32% Similarity=0.502 Sum_probs=26.0
Q ss_pred eEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHHHHHH
Q 015211 306 TYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETI 347 (411)
Q Consensus 306 ~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~y~~l 347 (411)
.++|+ +.|||+.+ .+++|||.+.+.++.+..+++
T Consensus 24 ~l~v~---~~Ing~~v-----~~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPL-----KAFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEE-----EEEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEE-----EEEEeCCCCcEeeCHHHHHHc
Confidence 45555 55788765 499999999999999985544
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=58.88 E-value=9.3 Score=30.95 Aligned_cols=26 Identities=12% Similarity=0.178 Sum_probs=22.6
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
++.+.|+ .|.+.+++|||.+++-+..
T Consensus 24 ~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 24 RITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred EEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 4568888 6999999999999999965
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=57.69 E-value=8.8 Score=30.71 Aligned_cols=21 Identities=29% Similarity=0.341 Sum_probs=18.3
Q ss_pred eCCCCeEEEEEEEcCCCceEEec
Q 015211 109 IGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 109 iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
|| .|.+.+++|||.|++-+..
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISE 47 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEET
T ss_pred CC--CEEEEEEecCCCCcEEEec
Confidence 55 5888999999999999976
No 50
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=57.07 E-value=8.2 Score=36.01 Aligned_cols=42 Identities=19% Similarity=0.226 Sum_probs=30.1
Q ss_pred eEeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHH
Q 015211 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (411)
Q Consensus 293 ~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~ 343 (411)
++++..+...+ ..|.++ |+||. ..+.++||||++.+++|..-
T Consensus 4 g~v~~~~~~~~-~~Y~~~---i~iG~-----Q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND-EEYITP---VTIGG-----TTLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG-SCEEEE---EEETT-----EEEEEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC-CEEEEE---EEECC-----EEEEEEEeCCCcceEEecCC
Confidence 45666665433 567665 77882 45679999999999999753
No 51
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=56.57 E-value=12 Score=28.40 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=24.0
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.+. |.||.- +..+.++||||++.+++|..
T Consensus 13 ~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYGE---IGIGTP---PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CeEEEE---EEECCC---CeEEEEEEeCCCCceEEeEc
Confidence 467665 788842 23567999999999999865
No 52
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=55.15 E-value=9.7 Score=35.54 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=30.5
Q ss_pred eEeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHH
Q 015211 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (411)
Q Consensus 293 ~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~ 343 (411)
++++..+.... ..|.++ |.||. ..+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~-~~Y~~~---i~iG~-----Q~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNND-EEYLTP---VTVGK-----STLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTT-SCEEEE---EEEBT-----EEEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCC-CEEEEE---EEECC-----EEEEEEEeCCCccceEeeCC
Confidence 45666665544 667665 77882 45679999999999998753
No 53
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=55.11 E-value=11 Score=32.93 Aligned_cols=26 Identities=31% Similarity=0.190 Sum_probs=22.6
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
.+.|.|| .|.+.+++|||.|++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4568899 6999999999999999864
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=53.19 E-value=11 Score=35.23 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=29.6
Q ss_pred eEeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHH
Q 015211 293 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (411)
Q Consensus 293 ~~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~ 343 (411)
++++..+.... ..|.++ |.||. ..+.++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~-~~Y~~~---i~iG~-----q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND-EEYITQ---VTVGD-----DTLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG-CCEEEE---EEETT-----EEEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC-CEEEEE---EEECC-----EEEEEEEcCCCcceEEecCC
Confidence 45555554433 567665 78882 46779999999999999753
No 55
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=41.50 E-value=30 Score=32.12 Aligned_cols=44 Identities=20% Similarity=0.227 Sum_probs=29.6
Q ss_pred eEeeee-ecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHHH
Q 015211 293 QSTSFL-ASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEV 343 (411)
Q Consensus 293 ~~~p~v-~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~~ 343 (411)
++.+.. +...+ ..|.++ |.||.- ...+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~~-~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 3 GSAPNHPSDSAD-SEYITS---VSIGTP---AQVLPLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEEESSTTC-CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBTT
T ss_pred cceeeecCCCCC-CEEEEE---EEECCC---CeEEEEEEcCCCCCeEEecCC
Confidence 345555 43333 567665 788842 235679999999999999753
No 56
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=39.66 E-value=33 Score=31.79 Aligned_cols=43 Identities=21% Similarity=0.200 Sum_probs=29.0
Q ss_pred eEeeee-ecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 293 QSTSFL-ASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 293 ~~~p~v-~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
++++.. +...+ ..|.++ |.||.- ...+.++||||++.+++|..
T Consensus 3 ~~v~~~~~~~~~-~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLD-DAYITP---VQIGTP---AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTC-CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCC-CEEEEE---EEECCC---CeEEEEEECCCCCCeEEecC
Confidence 345555 44333 567665 788842 23567999999999999965
No 57
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=39.41 E-value=30 Score=32.11 Aligned_cols=42 Identities=21% Similarity=0.311 Sum_probs=28.4
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
.++..+...+ ..|.+. |.||.- ...+.++||||++.+++|..
T Consensus 5 ~v~~~~~~~~-~~Y~~~---i~iGTP---~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGND-IEYYGQ---VTIGTP---GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTT-TEEEEE---EEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCC-CEEEEE---EEECCC---CeEEEEEEcCCCCCEEEccC
Confidence 4455444433 567665 778832 23467999999999999864
No 58
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=36.49 E-value=32 Score=29.94 Aligned_cols=26 Identities=31% Similarity=0.190 Sum_probs=22.7
Q ss_pred EEEEEeCCCCeEEEEEEEcCCCceEEec
Q 015211 104 YTWIDIGTPNVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 104 ~~~i~iGtP~q~~~v~~DTGS~~~Wv~~ 131 (411)
.+++.|| .|.+.+++|||.|++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 5678899 6999999999999999864
No 59
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=29.24 E-value=44 Score=32.02 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=28.0
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|+..... ...|.+. |.||.- +..+.++||||++.+++|-.
T Consensus 11 ~~pl~~~~~-~~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGS-TGLHWAN---LQKRTP---LMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTT-TCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EEeeecCCC-CceEEEE---EECCCC---CceeEEEEECCCCceeECCC
Confidence 455543222 2567665 778842 24567999999999999854
No 60
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=27.15 E-value=36 Score=31.56 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=23.9
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~Q~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 12 PSYASK---VSVGSN---KQQQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred CEEEEE---EEEcCC---CcEEEEEEeCCCCceEEecC
Confidence 567666 778842 23567999999999999853
No 61
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=26.68 E-value=74 Score=27.88 Aligned_cols=32 Identities=31% Similarity=0.566 Sum_probs=23.7
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.+. |.||.- +..+.++||||++.+++|..
T Consensus 13 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 13 TSYFGE---IGIGTP---PQKFTVIFDTGSSVLWVPSS 44 (239)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEeCCCcceEEEcC
Confidence 467665 778842 23567999999999999854
No 62
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=25.60 E-value=32 Score=32.01 Aligned_cols=32 Identities=25% Similarity=0.406 Sum_probs=23.7
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.+. |.||.- +..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 12 PSYAAD---IVVGSN---QQKQTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred cEEEEE---EEEcCC---CcEEEEEEcCCCCCEEEecC
Confidence 567665 778842 23567999999999999853
No 63
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=24.83 E-value=55 Score=31.60 Aligned_cols=41 Identities=15% Similarity=0.194 Sum_probs=28.1
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPK 341 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~ 341 (411)
.+|+..... ...|.++ |.||.- +..+.++||||+.++++|-
T Consensus 10 ~~pv~~d~~-~~~Y~~~---i~iGTP---pq~~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 10 VVPVKKDAS-TLQYVTT---INQRTP---LVSENLVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEEEECTT-TCCEEEE---EEETTT---TEEEEEEEETTCSSEEEEC
T ss_pred EEEeeecCC-CCeEEEE---EEcCCC---CcceEEEEeCCChhhhccc
Confidence 445544333 3567666 778853 2467899999999999985
No 64
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=24.49 E-value=51 Score=30.61 Aligned_cols=39 Identities=31% Similarity=0.520 Sum_probs=26.9
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPK 341 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~ 341 (411)
..|+... . ..|.++ |.||.- ...+.++||||++.++++.
T Consensus 4 ~~~l~n~--~-~~Y~~~---i~iGTP---~q~~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 4 SVPATNQ--L-VDYVVN---VGVGSP---ATTYSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEC--S-SCEEEE---EEETTT---TEEEEEEEETTCCCCEECS
T ss_pred cEeeecc--C-cEEEEE---EEECCC---CcEEEEEEeCCChhheecC
Confidence 4555442 2 467665 788842 2356799999999999985
No 65
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=24.03 E-value=46 Score=30.96 Aligned_cols=32 Identities=38% Similarity=0.636 Sum_probs=23.6
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.+. |.||.- ...+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 12 ITYTAD---ITVGSD---NQKLNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp SCEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred eEEEEE---EEECCC---CcEEEEEEeCCCCCeEEecC
Confidence 567665 778832 23567999999999999843
No 66
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=23.67 E-value=57 Score=30.89 Aligned_cols=26 Identities=19% Similarity=0.258 Sum_probs=20.9
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPK 341 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~ 341 (411)
..|.+. |.||.. ++||||++.+++|-
T Consensus 14 ~~Y~~~---i~iGtP--------v~~DTGSs~lWv~c 39 (381)
T 1t6e_X 14 SLYTIP---FHDGAS--------LVLDVAGPLVWSTC 39 (381)
T ss_dssp CCEEEE---EETTEE--------EEEETTCCCEEECC
T ss_pred cEEEEE---EeCCCE--------EEEECCCCceEEeC
Confidence 567776 677742 99999999999994
No 67
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=22.86 E-value=49 Score=30.66 Aligned_cols=32 Identities=34% Similarity=0.596 Sum_probs=23.9
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 12 VTYAAD---ITVGSN---NQKLNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred cEEEEE---EEEcCC---CcEEEEEEECCCcceEEEcC
Confidence 567666 778842 23567999999999999753
No 68
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=22.31 E-value=73 Score=29.26 Aligned_cols=41 Identities=22% Similarity=0.332 Sum_probs=27.6
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|+.... + ..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 5 ~~~l~n~~-~-~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 5 SVPLTNYL-D-SQYFGK---IYLGTP---PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEET-T-TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred eeeeEecc-C-CEEEEE---EEECCC---CeEEEEEEeCCccceEEcCC
Confidence 34554322 2 467665 778842 23567999999999999864
No 69
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=21.55 E-value=83 Score=28.87 Aligned_cols=32 Identities=34% Similarity=0.473 Sum_probs=24.1
Q ss_pred eeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 305 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 305 ~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 12 TEYYGV---ISIGTP---PESFKVIFDTGSSNLWVSSS 43 (324)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEeCCCcceEEecC
Confidence 467665 778842 23567999999999999965
No 70
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=21.34 E-value=94 Score=28.56 Aligned_cols=41 Identities=24% Similarity=0.459 Sum_probs=27.2
Q ss_pred EeeeeecCCCceeEEEeeeeeEeCCeeeccCcccEEEecCCcccccCHH
Q 015211 294 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 342 (411)
Q Consensus 294 ~~p~v~~~~~~~~y~v~l~~i~vgg~~~~~~~~~~iiDSGTs~t~lp~~ 342 (411)
..|+.... + ..|.++ |.||.- +..+.++||||++.+++|..
T Consensus 4 ~~~l~~~~-~-~~Y~~~---i~iGtP---~q~~~v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 4 DVPLTNYL-N-AQYYTD---ITLGTP---PQNFKVILDTGSSNLWVPSN 44 (329)
T ss_dssp EEECEEET-T-TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred ceeeeecC-C-CEEEEE---EEECCC---CcEEEEEEeCCCcCeEEecC
Confidence 34554332 2 456665 778842 23567999999999999864
No 71
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=21.03 E-value=1.2e+02 Score=26.30 Aligned_cols=26 Identities=15% Similarity=0.317 Sum_probs=20.8
Q ss_pred EEEeCCC----CeEEEEEEEcCCCceEEec
Q 015211 106 WIDIGTP----NVSFLVALDAGSDLLWIPC 131 (411)
Q Consensus 106 ~i~iGtP----~q~~~v~~DTGS~~~Wv~~ 131 (411)
.|.||.- .....+++|||+.++++|.
T Consensus 107 ~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~ 136 (241)
T 1lya_B 107 QVEVASGLTLCKEGCEAIVDTGTSLMVGPV 136 (241)
T ss_dssp EEEETTSCEESTTCEEEEECTTCSSEEECH
T ss_pred EEEECCeeEeccCCCEEEEECCCccccCCH
Confidence 5778752 2457899999999999997
Done!